##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1694v1 #!genome-build-accession NCBI_Assembly:GCF_000016945.1 ##sequence-region NC_009708.1 1 4723306 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=349747 NC_009708.1 RefSeq region 1 4723306 . + . ID=id0;Dbxref=taxon:349747;Is_circular=true;Name=ANONYMOUS;collection-date=1966;gbkey=Src;genome=chromosome;isolation-source=stool of a patient presenting with scarlet-like fever in the Primorski region of the former USSR%3B in 1971 sent to the Institut Pasteur (Paris%2C France) by Dr. Timofeeva (Antiplague Institute%2C Irkoutsk);mol_type=genomic DNA;serotype=O:1b;strain=IP 31758 NC_009708.1 RefSeq gene 21 461 . - . ID=gene0;Name=YPSIP31758_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01270;old_locus_tag=YpsIP31758_0001 NC_009708.1 Protein Homology CDS 21 461 . - 0 ID=cds0;Dbxref=Genbank:WP_002212258.1;Name=WP_002212258.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;gene=spf;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NC_009708.1 RefSeq gene 554 1015 . - . ID=gene1;Name=YPSIP31758_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01275;old_locus_tag=YpsIP31758_0002 NC_009708.1 Protein Homology CDS 554 1015 . - 0 ID=cds1;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11 NC_009708.1 RefSeq gene 1185 2177 . + . ID=gene2;Name=YPSIP31758_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01280;old_locus_tag=YpsIP31758_0003 NC_009708.1 Protein Homology CDS 1185 2177 . + 0 ID=cds2;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NC_009708.1 RefSeq gene 2276 3742 . - . ID=gene3;Name=YPSIP31758_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01285;old_locus_tag=YpsIP31758_0004 NC_009708.1 Protein Homology CDS 2276 3742 . - 0 ID=cds3;Dbxref=Genbank:WP_002212255.1;Name=WP_002212255.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_002212255.1;transl_table=11 NC_009708.1 RefSeq gene 3746 5284 . - . ID=gene4;Name=YPSIP31758_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01290;old_locus_tag=YpsIP31758_0005 NC_009708.1 Protein Homology CDS 3746 5284 . - 0 ID=cds4;Dbxref=Genbank:WP_011991003.1;Name=WP_011991003.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase RavA;protein_id=WP_011991003.1;transl_table=11 NC_009708.1 RefSeq gene 5558 7426 . + . ID=gene5;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01295;old_locus_tag=YpsIP31758_0006 NC_009708.1 Protein Homology CDS 5558 7426 . + 0 ID=cds5;Dbxref=Genbank:WP_011191440.1;Name=WP_011191440.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;product=low affinity potassium transport system protein kup;protein_id=WP_011191440.1;transl_table=11 NC_009708.1 RefSeq gene 7631 8050 . + . ID=gene6;Name=YPSIP31758_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01300;old_locus_tag=YpsIP31758_0007 NC_009708.1 Protein Homology CDS 7631 8050 . + 0 ID=cds6;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;gene=gcvB;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NC_009708.1 RefSeq gene 8101 9027 . + . ID=gene7;Name=YPSIP31758_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01305;old_locus_tag=YpsIP31758_0008 NC_009708.1 Protein Homology CDS 8101 9027 . + 0 ID=cds7;Dbxref=Genbank:WP_002212251.1;Name=WP_002212251.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NC_009708.1 RefSeq gene 9080 9250 . + . ID=gene8;Name=YPSIP31758_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01310;old_locus_tag=YpsIP31758_0010 NC_009708.1 Protein Homology CDS 9080 9250 . + 0 ID=cds8;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11 NC_009708.1 RefSeq gene 9247 10671 . - . ID=gene9;Name=YPSIP31758_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01315;old_locus_tag=YpsIP31758_0009 NC_009708.1 Protein Homology CDS 9247 10671 . - 0 ID=cds9;Dbxref=Genbank:WP_011991004.1;Name=WP_011991004.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011991004.1;transl_table=11 NC_009708.1 RefSeq gene 10751 11440 . - . ID=gene10;Name=YPSIP31758_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01320;old_locus_tag=YpsIP31758_0011 NC_009708.1 Protein Homology CDS 10751 11440 . - 0 ID=cds10;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NC_009708.1 RefSeq repeat_region 11551 17221 . + . ID=id1;gbkey=repeat_region NC_009708.1 RefSeq gene 11997 13545 . + . ID=gene11;Name=YPSIP31758_RS01330;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS01330;old_locus_tag=YpsIP31758_4189 NC_009708.1 RefSeq rRNA 11997 13545 . + . ID=rna0;Parent=gene11;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq exon 11997 13545 . + . ID=id2;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq gene 13679 13754 . + . ID=gene12;Name=YPSIP31758_RS01335;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS01335;old_locus_tag=YpsIP31758_4190 NC_009708.1 tRNAscan-SE tRNA 13679 13754 . + . ID=rna1;Parent=gene12;anticodon=(pos:13713..13715);gbkey=tRNA;product=tRNA-Glu NC_009708.1 tRNAscan-SE exon 13679 13754 . + . ID=id3;Parent=rna1;anticodon=(pos:13713..13715);gbkey=tRNA;product=tRNA-Glu NC_009708.1 RefSeq gene 13998 16931 . + . ID=gene13;Name=YPSIP31758_RS01340;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS01340;old_locus_tag=YpsIP31758_4191 NC_009708.1 RefSeq rRNA 13998 16931 . + . ID=rna2;Parent=gene13;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq exon 13998 16931 . + . ID=id4;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq gene 17023 17138 . + . ID=gene14;Name=YPSIP31758_RS01345;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS01345;old_locus_tag=YpsIP31758_4192 NC_009708.1 cmsearch rRNA 17023 17138 . + . ID=rna3;Parent=gene14;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 17023 17138 . + . ID=id5;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq gene 17289 17519 . + . ID=gene15;Name=YPSIP31758_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22520 NC_009708.1 Protein Homology CDS 17289 17519 . + 0 ID=cds11;Dbxref=Genbank:WP_049756377.1;Name=WP_049756377.1;gbkey=CDS;gene=rybB;product=hypothetical protein;protein_id=WP_049756377.1;transl_table=11 NC_009708.1 RefSeq repeat_region 17570 18884 . + . ID=id6;gbkey=repeat_region NC_009708.1 RefSeq gene 17641 18849 . + . ID=gene16;Name=YPSIP31758_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01350;old_locus_tag=YpsIP31758_0015 NC_009708.1 Protein Homology CDS 17641 18849 . + 0 ID=cds12;Dbxref=Genbank:WP_011991005.1;Name=WP_011991005.1;gbkey=CDS;product=transposase;protein_id=WP_011991005.1;transl_table=11 NC_009708.1 RefSeq gene 18907 19437 . - . ID=gene17;Name=YPSIP31758_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01355;old_locus_tag=YpsIP31758_0016 NC_009708.1 Protein Homology CDS 18907 19437 . - 0 ID=cds13;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;gene=srpB;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11 NC_009708.1 RefSeq gene 19437 20024 . - . ID=gene18;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01360;old_locus_tag=YpsIP31758_0017 NC_009708.1 Protein Homology CDS 19437 20024 . - 0 ID=cds14;Dbxref=Genbank:WP_011991007.1;Name=WP_011991007.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=sraD;product=molybdenum cofactor guanylyltransferase;protein_id=WP_011991007.1;transl_table=11 NC_009708.1 RefSeq gene 20178 20447 . + . ID=gene19;Name=YPSIP31758_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01365;old_locus_tag=YpsIP31758_0018 NC_009708.1 Protein Homology CDS 20178 20447 . + 0 ID=cds15;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11 NC_009708.1 RefSeq gene 20538 21524 . + . ID=gene20;Name=YPSIP31758_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01370;old_locus_tag=YpsIP31758_0019 NC_009708.1 Protein Homology CDS 20538 21524 . + 0 ID=cds16;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NC_009708.1 RefSeq gene 21552 22175 . + . ID=gene21;Name=YPSIP31758_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01375;old_locus_tag=YpsIP31758_0020 NC_009708.1 Protein Homology CDS 21552 22175 . + 0 ID=cds17;Dbxref=Genbank:WP_002213168.1;Name=WP_002213168.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NC_009708.1 RefSeq gene 22666 25464 . + . ID=gene22;Name=YPSIP31758_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01380;old_locus_tag=YpsIP31758_0021 NC_009708.1 Protein Homology CDS 22666 25464 . + 0 ID=cds18;Parent=gene22;Dbxref=Genbank:WP_011991008.1;Name=WP_011991008.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_011991008.1;transl_table=11 NC_009708.1 RefSeq gene 25613 25730 . + . ID=gene23;Name=spf;gbkey=Gene;gene=spf;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22395 NC_009708.1 RefSeq transcript 25613 25730 . + . ID=rna4;Parent=gene23;gbkey=misc_RNA;gene=spf;product=Spot 42 RNA NC_009708.1 RefSeq exon 25613 25730 . + . ID=id7;Parent=rna4;gbkey=misc_RNA;gene=spf;product=Spot 42 RNA NC_009708.1 RefSeq gene 25872 26522 . - . ID=gene24;Name=YPSIP31758_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01385;old_locus_tag=YpsIP31758_0022 NC_009708.1 Protein Homology CDS 25872 26522 . - 0 ID=cds19;Parent=gene24;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11 NC_009708.1 RefSeq gene 26868 27121 . + . ID=gene25;Name=YPSIP31758_RS22400;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22400 NC_009708.1 RefSeq transcript 26868 27121 . + . ID=rna5;Parent=gene25;gbkey=misc_RNA;product=CsrC RNA family NC_009708.1 RefSeq exon 26868 27121 . + . ID=id8;Parent=rna5;gbkey=misc_RNA;product=CsrC RNA family NC_009708.1 RefSeq gene 26931 27149 . + . ID=gene26;Name=YPSIP31758_RS01390;end_range=27149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS01390;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 26931 27149 . + 0 ID=cds20;Parent=gene26;end_range=27149,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 27266 27832 . + . ID=gene27;Name=YPSIP31758_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01395;old_locus_tag=YpsIP31758_0023 NC_009708.1 Protein Homology CDS 27266 27832 . + 0 ID=cds21;Parent=gene27;Dbxref=Genbank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NC_009708.1 RefSeq gene 28015 29388 . + . ID=gene28;Name=YPSIP31758_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01400;old_locus_tag=YpsIP31758_0024 NC_009708.1 Protein Homology CDS 28015 29388 . + 0 ID=cds22;Parent=gene28;Dbxref=Genbank:WP_002213155.1;Name=WP_002213155.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NC_009708.1 RefSeq gene 29442 30854 . - . ID=gene29;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01405;old_locus_tag=YpsIP31758_0025 NC_009708.1 Protein Homology CDS 29442 30854 . - 0 ID=cds23;Parent=gene29;Dbxref=Genbank:WP_011191444.1;Name=WP_011191444.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_011191444.1;transl_table=11 NC_009708.1 RefSeq gene 30862 31911 . - . ID=gene30;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01410;old_locus_tag=YpsIP31758_0026 NC_009708.1 Protein Homology CDS 30862 31911 . - 0 ID=cds24;Parent=gene30;Dbxref=Genbank:WP_002213151.1;Name=WP_002213151.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_002213151.1;transl_table=11 NC_009708.1 RefSeq gene 32164 33573 . - . ID=gene31;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01415;old_locus_tag=YpsIP31758_0027 NC_009708.1 Protein Homology CDS 32164 33573 . - 0 ID=cds25;Parent=gene31;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11 NC_009708.1 RefSeq gene 33759 33890 . - . ID=gene32;Name=YPSIP31758_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01420 NC_009708.1 Protein Homology CDS 33759 33890 . - 0 ID=cds26;Parent=gene32;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11 NC_009708.1 RefSeq gene 34135 35958 . + . ID=gene33;Name=YPSIP31758_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01425;old_locus_tag=YpsIP31758_0028 NC_009708.1 Protein Homology CDS 34135 35958 . + 0 ID=cds27;Parent=gene33;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11 NC_009708.1 RefSeq gene 36281 36871 . + . ID=gene34;Name=YPSIP31758_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01430;old_locus_tag=YpsIP31758_0029 NC_009708.1 Protein Homology CDS 36281 36871 . + 0 ID=cds28;Parent=gene34;Dbxref=Genbank:WP_011991009.1;Name=WP_011991009.1;gbkey=CDS;product=alpha-D-glucose-1-phosphatase;protein_id=WP_011991009.1;transl_table=11 NC_009708.1 RefSeq gene 36968 37852 . + . ID=gene35;Name=YPSIP31758_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01435;old_locus_tag=YpsIP31758_0030 NC_009708.1 Protein Homology CDS 36968 37852 . + 0 ID=cds29;Parent=gene35;Dbxref=Genbank:WP_011191445.1;Name=WP_011191445.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191445.1;transl_table=11 NC_009708.1 RefSeq gene 37859 38296 . + . ID=gene36;Name=YPSIP31758_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01440;old_locus_tag=YpsIP31758_0031 NC_009708.1 Protein Homology CDS 37859 38296 . + 0 ID=cds30;Parent=gene36;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NC_009708.1 RefSeq gene 38482 39405 . + . ID=gene37;Name=YPSIP31758_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01445;old_locus_tag=YpsIP31758_0032 NC_009708.1 Protein Homology CDS 38482 39405 . + 0 ID=cds31;Parent=gene37;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11 NC_009708.1 RefSeq gene 39540 41249 . - . ID=gene38;Name=YPSIP31758_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01450;old_locus_tag=YpsIP31758_0033 NC_009708.1 Protein Homology CDS 39540 41249 . - 0 ID=cds32;Parent=gene38;Dbxref=Genbank:WP_011991010.1;Name=WP_011991010.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011991010.1;transl_table=11 NC_009708.1 RefSeq gene 41396 42781 . - . ID=gene39;Name=YPSIP31758_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01455;old_locus_tag=YpsIP31758_0034 NC_009708.1 Protein Homology CDS 41396 42781 . - 0 ID=cds33;Parent=gene39;Dbxref=Genbank:WP_011191446.1;Name=WP_011191446.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease;protein_id=WP_011191446.1;transl_table=11 NC_009708.1 RefSeq gene 43019 44233 . + . ID=gene40;Name=YPSIP31758_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01460;old_locus_tag=YpsIP31758_0036 NC_009708.1 Protein Homology CDS 43019 44233 . + 0 ID=cds34;Parent=gene40;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11 NC_009708.1 RefSeq repeat_region 44331 44510 . + . ID=id9;gbkey=repeat_region NC_009708.1 RefSeq gene 44599 46680 . - . ID=gene41;Name=YPSIP31758_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01465;old_locus_tag=YpsIP31758_0037 NC_009708.1 Protein Homology CDS 44599 46680 . - 0 ID=cds35;Parent=gene41;Dbxref=Genbank:WP_011991011.1;Name=WP_011991011.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_011991011.1;transl_table=11 NC_009708.1 RefSeq gene 46681 47340 . - . ID=gene42;Name=YPSIP31758_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01470;old_locus_tag=YpsIP31758_0038 NC_009708.1 Protein Homology CDS 46681 47340 . - 0 ID=cds36;Parent=gene42;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11 NC_009708.1 RefSeq gene 47379 49487 . - . ID=gene43;Name=YPSIP31758_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01475;old_locus_tag=YpsIP31758_0039 NC_009708.1 Protein Homology CDS 47379 49487 . - 0 ID=cds37;Parent=gene43;Dbxref=Genbank:WP_002209002.1;Name=WP_002209002.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NC_009708.1 RefSeq gene 49507 49782 . - . ID=gene44;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01480;old_locus_tag=YpsIP31758_0040 NC_009708.1 Protein Homology CDS 49507 49782 . - 0 ID=cds38;Parent=gene44;Dbxref=Genbank:WP_004392061.1;Name=WP_004392061.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004392061.1;transl_table=11 NC_009708.1 RefSeq gene 49837 50460 . - . ID=gene45;Name=YPSIP31758_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01485;old_locus_tag=YpsIP31758_0041 NC_009708.1 Protein Homology CDS 49837 50460 . - 0 ID=cds39;Parent=gene45;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NC_009708.1 RefSeq gene 50861 52564 . + . ID=gene46;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=YPSIP31758_RS01490;old_locus_tag=YpsIP31758_0042 NC_009708.1 Protein Homology CDS 50861 52564 . + 0 ID=cds40;Parent=gene46;Dbxref=Genbank:WP_011991012.1;Name=WP_011991012.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_011991012.1;transl_table=11 NC_009708.1 RefSeq gene 52584 53201 . - . ID=gene47;Name=YPSIP31758_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01495;old_locus_tag=YpsIP31758_0043 NC_009708.1 Protein Homology CDS 52584 53201 . - 0 ID=cds41;Parent=gene47;Dbxref=Genbank:WP_012104253.1;Name=WP_012104253.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104253.1;transl_table=11 NC_009708.1 RefSeq gene 53942 54313 . + . ID=gene48;Name=YPSIP31758_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01500;old_locus_tag=YpsIP31758_0044 NC_009708.1 Protein Homology CDS 53942 54313 . + 0 ID=cds42;Parent=gene48;Dbxref=Genbank:WP_012104254.1;Name=WP_012104254.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104254.1;transl_table=11 NC_009708.1 RefSeq gene 54330 54518 . - . ID=gene49;Name=YPSIP31758_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01505;old_locus_tag=YpsIP31758_0045 NC_009708.1 Protein Homology CDS 54330 54518 . - 0 ID=cds43;Parent=gene49;Dbxref=Genbank:WP_038401641.1;Name=WP_038401641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401641.1;transl_table=11 NC_009708.1 RefSeq gene 54572 54910 . - . ID=gene50;Name=YPSIP31758_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01510 NC_009708.1 Protein Homology CDS 54572 54910 . - 0 ID=cds44;Parent=gene50;Dbxref=Genbank:WP_041175713.1;Name=WP_041175713.1;gbkey=CDS;product=terminase;protein_id=WP_041175713.1;transl_table=11 NC_009708.1 RefSeq repeat_region 54576 55263 . + . ID=id10;gbkey=repeat_region NC_009708.1 RefSeq gene 54888 55174 . - . ID=gene51;Name=YPSIP31758_RS01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS01515;pseudo=true NC_009708.1 Protein Homology CDS 54888 55174 . - 0 ID=cds45;Parent=gene51;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase small subunit;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 55332 55616 . - . ID=gene52;Name=YPSIP31758_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01520 NC_009708.1 Protein Homology CDS 55332 55616 . - 0 ID=cds46;Parent=gene52;Dbxref=Genbank:WP_025382021.1;Name=WP_025382021.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_025382021.1;transl_table=11 NC_009708.1 RefSeq gene 55662 55865 . - . ID=gene53;Name=YPSIP31758_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01525 NC_009708.1 Protein Homology CDS 55662 55865 . - 0 ID=cds47;Parent=gene53;Dbxref=Genbank:WP_025382022.1;Name=WP_025382022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025382022.1;transl_table=11 NC_009708.1 RefSeq gene 56182 56997 . - . ID=gene54;Name=YPSIP31758_RS01530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS01530;partial=true;pseudo=true;start_range=.,56182 NC_009708.1 Protein Homology CDS 56182 56997 . - 0 ID=cds48;Parent=gene54;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,56182;transl_table=11 NC_009708.1 RefSeq repeat_region 56362 57229 . + . ID=id11;gbkey=repeat_region NC_009708.1 RefSeq gene 57659 58255 . - . ID=gene55;Name=YPSIP31758_RS01535;end_range=58255,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS01535;partial=true;pseudo=true;start_range=.,57659 NC_009708.1 Protein Homology CDS 57659 58255 . - 0 ID=cds49;Parent=gene55;end_range=58255,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=DNA primase;pseudo=true;start_range=.,57659;transl_table=11 NC_009708.1 RefSeq gene 58771 59781 . - . ID=gene56;Name=YPSIP31758_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01545;old_locus_tag=YpsIP31758_0050 NC_009708.1 Protein Homology CDS 58771 59781 . - 0 ID=cds50;Parent=gene56;Dbxref=Genbank:WP_012104260.1;Name=WP_012104260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104260.1;transl_table=11 NC_009708.1 RefSeq gene 59796 60185 . - . ID=gene57;Name=YPSIP31758_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01550;old_locus_tag=YpsIP31758_0051 NC_009708.1 Protein Homology CDS 59796 60185 . - 0 ID=cds51;Parent=gene57;Dbxref=Genbank:WP_042659863.1;Name=WP_042659863.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042659863.1;transl_table=11 NC_009708.1 RefSeq gene 60215 60433 . - . ID=gene58;Name=YPSIP31758_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01555;old_locus_tag=YpsIP31758_0052 NC_009708.1 Protein Homology CDS 60215 60433 . - 0 ID=cds52;Parent=gene58;Dbxref=Genbank:WP_012104262.1;Name=WP_012104262.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104262.1;transl_table=11 NC_009708.1 RefSeq gene 60547 61440 . - . ID=gene59;Name=YPSIP31758_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01560;old_locus_tag=YpsIP31758_0053 NC_009708.1 Protein Homology CDS 60547 61440 . - 0 ID=cds53;Parent=gene59;Dbxref=Genbank:WP_012104263.1;Name=WP_012104263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104263.1;transl_table=11 NC_009708.1 RefSeq gene 61537 62805 . - . ID=gene60;Name=YPSIP31758_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01565;old_locus_tag=YpsIP31758_0054 NC_009708.1 Protein Homology CDS 61537 62805 . - 0 ID=cds54;Parent=gene60;Dbxref=Genbank:WP_012104264.1;Name=WP_012104264.1;gbkey=CDS;product=integrase;protein_id=WP_012104264.1;transl_table=11 NC_009708.1 RefSeq gene 62995 63858 . - . ID=gene61;Name=YPSIP31758_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01570;old_locus_tag=YpsIP31758_0055 NC_009708.1 Protein Homology CDS 62995 63858 . - 0 ID=cds55;Parent=gene61;Dbxref=Genbank:WP_002208998.1;Name=WP_002208998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208998.1;transl_table=11 NC_009708.1 RefSeq gene 63985 64701 . + . ID=gene62;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01575;old_locus_tag=YpsIP31758_0056 NC_009708.1 Protein Homology CDS 63985 64701 . + 0 ID=cds56;Parent=gene62;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NC_009708.1 RefSeq gene 64868 65515 . + . ID=gene63;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01580;old_locus_tag=YpsIP31758_0057 NC_009708.1 Protein Homology CDS 64868 65515 . + 0 ID=cds57;Parent=gene63;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NC_009708.1 RefSeq gene 65650 66246 . - . ID=gene64;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=YPSIP31758_RS01585;old_locus_tag=YpsIP31758_0058 NC_009708.1 Protein Homology CDS 65650 66246 . - 0 ID=cds58;Parent=gene64;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NC_009708.1 RefSeq gene 66368 66826 . - . ID=gene65;Name=YPSIP31758_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01590;old_locus_tag=YpsIP31758_0059 NC_009708.1 Protein Homology CDS 66368 66826 . - 0 ID=cds59;Parent=gene65;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11 NC_009708.1 RefSeq gene 66804 68021 . - . ID=gene66;Name=YPSIP31758_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01595;old_locus_tag=YpsIP31758_0060 NC_009708.1 Protein Homology CDS 66804 68021 . - 0 ID=cds60;Parent=gene66;Dbxref=Genbank:WP_038824339.1;Name=WP_038824339.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_038824339.1;transl_table=11 NC_009708.1 RefSeq gene 68215 68883 . + . ID=gene67;Name=YPSIP31758_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01600;old_locus_tag=YpsIP31758_0061 NC_009708.1 Protein Homology CDS 68215 68883 . + 0 ID=cds61;Parent=gene67;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11 NC_009708.1 RefSeq gene 69146 69382 . + . ID=gene68;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01605;old_locus_tag=YpsIP31758_0062 NC_009708.1 Protein Homology CDS 69146 69382 . + 0 ID=cds62;Parent=gene68;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NC_009708.1 RefSeq gene 69394 69561 . + . ID=gene69;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01610;old_locus_tag=YpsIP31758_0063 NC_009708.1 Protein Homology CDS 69394 69561 . + 0 ID=cds63;Parent=gene69;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NC_009708.1 RefSeq gene 69644 70453 . + . ID=gene70;Name=YPSIP31758_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01615;old_locus_tag=YpsIP31758_0064 NC_009708.1 Protein Homology CDS 69644 70453 . + 0 ID=cds64;Parent=gene70;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11 NC_009708.1 RefSeq gene 70459 70938 . - . ID=gene71;Name=YPSIP31758_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01620;old_locus_tag=YpsIP31758_0065 NC_009708.1 Protein Homology CDS 70459 70938 . - 0 ID=cds65;Parent=gene71;Dbxref=Genbank:WP_012104267.1;Name=WP_012104267.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_012104267.1;transl_table=11 NC_009708.1 RefSeq gene 70935 71717 . - . ID=gene72;Name=YPSIP31758_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01625;old_locus_tag=YpsIP31758_0066 NC_009708.1 Protein Homology CDS 70935 71717 . - 0 ID=cds66;Parent=gene72;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11 NC_009708.1 RefSeq gene 71718 72995 . - . ID=gene73;Name=YPSIP31758_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01630;old_locus_tag=YpsIP31758_0067 NC_009708.1 Protein Homology CDS 71718 72995 . - 0 ID=cds67;Parent=gene73;Dbxref=Genbank:WP_002208986.1;Name=WP_002208986.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NC_009708.1 RefSeq gene 73415 74380 . - . ID=gene74;Name=YPSIP31758_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01635;old_locus_tag=YpsIP31758_0068 NC_009708.1 Protein Homology CDS 73415 74380 . - 0 ID=cds68;Parent=gene74;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11 NC_009708.1 RefSeq gene 74380 75444 . - . ID=gene75;Name=YPSIP31758_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01640;old_locus_tag=YpsIP31758_0069 NC_009708.1 Protein Homology CDS 74380 75444 . - 0 ID=cds69;Parent=gene75;Dbxref=Genbank:WP_011191450.1;Name=WP_011191450.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_011191450.1;transl_table=11 NC_009708.1 RefSeq gene 75475 76407 . - . ID=gene76;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01645;old_locus_tag=YpsIP31758_0070 NC_009708.1 Protein Homology CDS 75475 76407 . - 0 ID=cds70;Parent=gene76;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11 NC_009708.1 RefSeq gene 76653 77864 . + . ID=gene77;Name=YPSIP31758_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01650;old_locus_tag=YpsIP31758_0071 NC_009708.1 Protein Homology CDS 76653 77864 . + 0 ID=cds71;Parent=gene77;Dbxref=Genbank:WP_012104268.1;Name=WP_012104268.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_012104268.1;transl_table=11 NC_009708.1 RefSeq gene 77874 78899 . + . ID=gene78;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01655;old_locus_tag=YpsIP31758_0072 NC_009708.1 Protein Homology CDS 77874 78899 . + 0 ID=cds72;Parent=gene78;Dbxref=Genbank:WP_011191451.1;Name=WP_011191451.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_011191451.1;transl_table=11 NC_009708.1 RefSeq gene 79037 80047 . - . ID=gene79;Name=YPSIP31758_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01660;old_locus_tag=YpsIP31758_0073 NC_009708.1 Protein Homology CDS 79037 80047 . - 0 ID=cds73;Parent=gene79;Dbxref=Genbank:WP_011191452.1;Name=WP_011191452.1;gbkey=CDS;product=sugar deacetylase;protein_id=WP_011191452.1;transl_table=11 NC_009708.1 RefSeq gene 80071 81441 . - . ID=gene80;Name=YPSIP31758_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01665;old_locus_tag=YpsIP31758_0074 NC_009708.1 Protein Homology CDS 80071 81441 . - 0 ID=cds74;Parent=gene80;Dbxref=Genbank:WP_012104269.1;Name=WP_012104269.1;gbkey=CDS;product=peptidase M37;protein_id=WP_012104269.1;transl_table=11 NC_009708.1 RefSeq gene 81451 82998 . - . ID=gene81;Name=YPSIP31758_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01670;old_locus_tag=YpsIP31758_0075 NC_009708.1 Protein Homology CDS 81451 82998 . - 0 ID=cds75;Parent=gene81;Dbxref=Genbank:WP_012104270.1;Name=WP_012104270.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_012104270.1;transl_table=11 NC_009708.1 RefSeq gene 83395 83829 . + . ID=gene82;Name=YPSIP31758_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01675;old_locus_tag=YpsIP31758_0076 NC_009708.1 Protein Homology CDS 83395 83829 . + 0 ID=cds76;Parent=gene82;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11 NC_009708.1 RefSeq gene 83948 84196 . + . ID=gene83;Name=YPSIP31758_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01680;old_locus_tag=YpsIP31758_0077 NC_009708.1 Protein Homology CDS 83948 84196 . + 0 ID=cds77;Parent=gene83;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11 NC_009708.1 RefSeq gene 84284 84760 . + . ID=gene84;Name=YPSIP31758_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01685;old_locus_tag=YpsIP31758_0078 NC_009708.1 Protein Homology CDS 84284 84760 . + 0 ID=cds78;Parent=gene84;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11 NC_009708.1 RefSeq gene 84760 85779 . + . ID=gene85;Name=YPSIP31758_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01690;old_locus_tag=YpsIP31758_0079 NC_009708.1 Protein Homology CDS 84760 85779 . + 0 ID=cds79;Parent=gene85;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11 NC_009708.1 RefSeq gene 85839 85979 . + . ID=gene86;Name=YPSIP31758_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01695 NC_009708.1 Protein Homology CDS 85839 85979 . + 0 ID=cds80;Parent=gene86;Dbxref=Genbank:WP_011191454.1;Name=WP_011191454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191454.1;transl_table=11 NC_009708.1 RefSeq gene 86045 86866 . + . ID=gene87;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01700;old_locus_tag=YpsIP31758_0080 NC_009708.1 Protein Homology CDS 86045 86866 . + 0 ID=cds81;Parent=gene87;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NC_009708.1 RefSeq gene 86989 87477 . - . ID=gene88;Name=YPSIP31758_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01705;old_locus_tag=YpsIP31758_0081 NC_009708.1 Protein Homology CDS 86989 87477 . - 0 ID=cds82;Parent=gene88;Dbxref=Genbank:WP_002208973.1;Name=WP_002208973.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_002208973.1;transl_table=11 NC_009708.1 RefSeq gene 87666 88730 . + . ID=gene89;Name=YPSIP31758_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01710;old_locus_tag=YpsIP31758_0082 NC_009708.1 Protein Homology CDS 87666 88730 . + 0 ID=cds83;Parent=gene89;Dbxref=Genbank:WP_012104271.1;Name=WP_012104271.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_012104271.1;transl_table=11 NC_009708.1 RefSeq gene 88798 90174 . - . ID=gene90;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01715;old_locus_tag=YpsIP31758_0083 NC_009708.1 Protein Homology CDS 88798 90174 . - 0 ID=cds84;Parent=gene90;Dbxref=Genbank:WP_002208971.1;Name=WP_002208971.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_002208971.1;transl_table=11 NC_009708.1 RefSeq gene 90171 90869 . - . ID=gene91;Name=YPSIP31758_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01720;old_locus_tag=YpsIP31758_0084 NC_009708.1 Protein Homology CDS 90171 90869 . - 0 ID=cds85;Parent=gene91;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11 NC_009708.1 RefSeq gene 91043 91531 . + . ID=gene92;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01725;old_locus_tag=YpsIP31758_0085 NC_009708.1 Protein Homology CDS 91043 91531 . + 0 ID=cds86;Parent=gene92;Dbxref=Genbank:WP_002208969.1;Name=WP_002208969.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_002208969.1;transl_table=11 NC_009708.1 RefSeq gene 92209 93168 . + . ID=gene93;Name=YPSIP31758_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01730;old_locus_tag=YpsIP31758_0086 NC_009708.1 Protein Homology CDS 92209 93168 . + 0 ID=cds87;Parent=gene93;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11 NC_009708.1 RefSeq gene 93730 94632 . + . ID=gene94;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=YPSIP31758_RS01735;old_locus_tag=YpsIP31758_0088 NC_009708.1 Protein Homology CDS 93730 94632 . + 0 ID=cds88;Parent=gene94;Dbxref=Genbank:WP_012104272.1;Name=WP_012104272.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=iron transporter;protein_id=WP_012104272.1;transl_table=11 NC_009708.1 RefSeq gene 94850 95833 . + . ID=gene95;Name=YPSIP31758_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01740;old_locus_tag=YpsIP31758_0089 NC_009708.1 Protein Homology CDS 94850 95833 . + 0 ID=cds89;Parent=gene95;Dbxref=Genbank:WP_002208966.1;Name=WP_002208966.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_002208966.1;transl_table=11 NC_009708.1 RefSeq gene 96054 97043 . + . ID=gene96;Name=YPSIP31758_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01745;old_locus_tag=YpsIP31758_0090 NC_009708.1 Protein Homology CDS 96054 97043 . + 0 ID=cds90;Parent=gene96;Dbxref=Genbank:WP_012104273.1;Name=WP_012104273.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_012104273.1;transl_table=11 NC_009708.1 RefSeq gene 97293 97952 . - . ID=gene97;Name=YPSIP31758_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01750;old_locus_tag=YpsIP31758_0091 NC_009708.1 Protein Homology CDS 97293 97952 . - 0 ID=cds91;Parent=gene97;Dbxref=Genbank:WP_041175817.1;Name=WP_041175817.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_041175817.1;transl_table=11 NC_009708.1 RefSeq gene 98187 99614 . - . ID=gene98;Name=YPSIP31758_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01755;old_locus_tag=YpsIP31758_0092 NC_009708.1 Protein Homology CDS 98187 99614 . - 0 ID=cds92;Parent=gene98;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11 NC_009708.1 RefSeq gene 99680 100393 . - . ID=gene99;Name=YPSIP31758_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01760;old_locus_tag=YpsIP31758_0093 NC_009708.1 Protein Homology CDS 99680 100393 . - 0 ID=cds93;Parent=gene99;Dbxref=Genbank:WP_002208962.1;Name=WP_002208962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208962.1;transl_table=11 NC_009708.1 RefSeq gene 100390 101127 . - . ID=gene100;Name=YPSIP31758_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01765;old_locus_tag=YpsIP31758_0094 NC_009708.1 Protein Homology CDS 100390 101127 . - 0 ID=cds94;Parent=gene100;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11 NC_009708.1 RefSeq gene 101264 102499 . + . ID=gene101;Name=YPSIP31758_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01770;old_locus_tag=YpsIP31758_0095 NC_009708.1 Protein Homology CDS 101264 102499 . + 0 ID=cds95;Parent=gene101;Dbxref=Genbank:WP_012104275.1;Name=WP_012104275.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012104275.1;transl_table=11 NC_009708.1 RefSeq gene 102729 103496 . - . ID=gene102;Name=YPSIP31758_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01775;old_locus_tag=YpsIP31758_0096 NC_009708.1 Protein Homology CDS 102729 103496 . - 0 ID=cds96;Parent=gene102;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NC_009708.1 RefSeq gene 103625 104260 . - . ID=gene103;Name=YPSIP31758_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01780;old_locus_tag=YpsIP31758_0097 NC_009708.1 Protein Homology CDS 103625 104260 . - 0 ID=cds97;Parent=gene103;Dbxref=Genbank:WP_002215864.1;Name=WP_002215864.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215864.1;transl_table=11 NC_009708.1 RefSeq gene 104408 104842 . + . ID=gene104;Name=YPSIP31758_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01785;old_locus_tag=YpsIP31758_0098 NC_009708.1 Protein Homology CDS 104408 104842 . + 0 ID=cds98;Parent=gene104;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11 NC_009708.1 RefSeq gene 105238 105984 . - . ID=gene105;Name=YPSIP31758_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01790;old_locus_tag=YpsIP31758_0099 NC_009708.1 Protein Homology CDS 105238 105984 . - 0 ID=cds99;Parent=gene105;Dbxref=Genbank:WP_002208956.1;Name=WP_002208956.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_002208956.1;transl_table=11 NC_009708.1 RefSeq gene 106139 107149 . - . ID=gene106;Name=YPSIP31758_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01795;old_locus_tag=YpsIP31758_0100 NC_009708.1 Protein Homology CDS 106139 107149 . - 0 ID=cds100;Parent=gene106;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NC_009708.1 RefSeq gene 107418 108941 . - . ID=gene107;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01800;old_locus_tag=YpsIP31758_0101 NC_009708.1 Protein Homology CDS 107418 108941 . - 0 ID=cds101;Parent=gene107;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11 NC_009708.1 RefSeq gene 109118 109966 . - . ID=gene108;Name=YPSIP31758_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01805;old_locus_tag=YpsIP31758_0102 NC_009708.1 Protein Homology CDS 109118 109966 . - 0 ID=cds102;Parent=gene108;Dbxref=Genbank:WP_002208954.1;Name=WP_002208954.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_002208954.1;transl_table=11 NC_009708.1 RefSeq gene 109976 110215 . - . ID=gene109;Name=YPSIP31758_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01810 NC_009708.1 Protein Homology CDS 109976 110215 . - 0 ID=cds103;Parent=gene109;Dbxref=Genbank:WP_002215868.1;Name=WP_002215868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215868.1;transl_table=11 NC_009708.1 RefSeq repeat_region 110319 110437 . + . ID=id12;gbkey=repeat_region NC_009708.1 RefSeq gene 110674 110913 . + . ID=gene110;Name=YPSIP31758_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01815;old_locus_tag=YpsIP31758_0103 NC_009708.1 Protein Homology CDS 110674 110913 . + 0 ID=cds104;Parent=gene110;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11 NC_009708.1 RefSeq gene 111233 113347 . - . ID=gene111;Name=YPSIP31758_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01820;old_locus_tag=YpsIP31758_0105 NC_009708.1 Protein Homology CDS 111233 113347 . - 0 ID=cds105;Parent=gene111;Dbxref=Genbank:WP_011191463.1;Name=WP_011191463.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_011191463.1;transl_table=11 NC_009708.1 RefSeq gene 113340 114632 . - . ID=gene112;Name=YPSIP31758_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01825;old_locus_tag=YpsIP31758_0106 NC_009708.1 Protein Homology CDS 113340 114632 . - 0 ID=cds106;Parent=gene112;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11 NC_009708.1 RefSeq gene 114845 115084 . + . ID=gene113;Name=YPSIP31758_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01830;old_locus_tag=YpsIP31758_0107 NC_009708.1 Protein Homology CDS 114845 115084 . + 0 ID=cds107;Parent=gene113;Dbxref=Genbank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NC_009708.1 RefSeq gene 115259 115408 . + . ID=gene114;Name=YPSIP31758_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01835;old_locus_tag=YpsIP31758_0108 NC_009708.1 Protein Homology CDS 115259 115408 . + 0 ID=cds108;Parent=gene114;Dbxref=Genbank:WP_002208947.1;Name=WP_002208947.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208947.1;transl_table=11 NC_009708.1 RefSeq gene 115714 116298 . + . ID=gene115;Name=YPSIP31758_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01840;old_locus_tag=YpsIP31758_0109 NC_009708.1 Protein Homology CDS 115714 116298 . + 0 ID=cds109;Parent=gene115;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11 NC_009708.1 RefSeq gene 116415 116900 . - . ID=gene116;Name=YPSIP31758_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01845;old_locus_tag=YpsIP31758_0110 NC_009708.1 Protein Homology CDS 116415 116900 . - 0 ID=cds110;Parent=gene116;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=ribonuclease E activity regulator RraA;protein_id=WP_002208945.1;transl_table=11 NC_009708.1 RefSeq gene 117042 117959 . - . ID=gene117;Name=YPSIP31758_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01850;old_locus_tag=YpsIP31758_0111 NC_009708.1 Protein Homology CDS 117042 117959 . - 0 ID=cds111;Parent=gene117;Dbxref=Genbank:WP_012104277.1;Name=WP_012104277.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_012104277.1;transl_table=11 NC_009708.1 RefSeq gene 118177 119508 . - . ID=gene118;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01855;old_locus_tag=YpsIP31758_0112 NC_009708.1 Protein Homology CDS 118177 119508 . - 0 ID=cds112;Parent=gene118;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NC_009708.1 RefSeq gene 119579 120103 . - . ID=gene119;Name=YPSIP31758_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01860;old_locus_tag=YpsIP31758_0113 NC_009708.1 Protein Homology CDS 119579 120103 . - 0 ID=cds113;Parent=gene119;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NC_009708.1 RefSeq gene 120203 121048 . - . ID=gene120;Name=YPSIP31758_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01865;old_locus_tag=YpsIP31758_0114 NC_009708.1 Protein Homology CDS 120203 121048 . - 0 ID=cds114;Parent=gene120;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NC_009708.1 RefSeq gene 121114 122142 . - . ID=gene121;Name=YPSIP31758_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01870;old_locus_tag=YpsIP31758_0115 NC_009708.1 Protein Homology CDS 121114 122142 . - 0 ID=cds115;Parent=gene121;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11 NC_009708.1 RefSeq gene 122265 122408 . - . ID=gene122;Name=YPSIP31758_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01875 NC_009708.1 Protein Homology CDS 122265 122408 . - 0 ID=cds116;Parent=gene122;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11 NC_009708.1 RefSeq gene 122495 124693 . - . ID=gene123;Name=YPSIP31758_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01880;old_locus_tag=YpsIP31758_0116 NC_009708.1 Protein Homology CDS 122495 124693 . - 0 ID=cds117;Parent=gene123;Dbxref=Genbank:WP_012104279.1;Name=WP_012104279.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_012104279.1;transl_table=11 NC_009708.1 RefSeq gene 124946 125161 . + . ID=gene124;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01885;old_locus_tag=YpsIP31758_0118 NC_009708.1 Protein Homology CDS 124946 125161 . + 0 ID=cds118;Parent=gene124;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NC_009708.1 RefSeq gene 125685 126140 . - . ID=gene125;Name=YPSIP31758_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01890;old_locus_tag=YpsIP31758_0119 NC_009708.1 Protein Homology CDS 125685 126140 . - 0 ID=cds119;Parent=gene125;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11 NC_009708.1 RefSeq gene 126191 126352 . + . ID=gene126;Name=YPSIP31758_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01895 NC_009708.1 Protein Homology CDS 126191 126352 . + 0 ID=cds120;Parent=gene126;Dbxref=Genbank:WP_038400685.1;Name=WP_038400685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400685.1;transl_table=11 NC_009708.1 RefSeq gene 126489 126806 . - . ID=gene127;Name=YPSIP31758_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01900;old_locus_tag=YpsIP31758_0120 NC_009708.1 Protein Homology CDS 126489 126806 . - 0 ID=cds121;Parent=gene127;Dbxref=Genbank:WP_004392248.1;Name=WP_004392248.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_004392248.1;transl_table=11 NC_009708.1 RefSeq gene 127184 128344 . + . ID=gene128;Name=YPSIP31758_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01905;old_locus_tag=YpsIP31758_0121 NC_009708.1 Protein Homology CDS 127184 128344 . + 0 ID=cds122;Parent=gene128;Dbxref=Genbank:WP_011191466.1;Name=WP_011191466.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;product=cystathionine gamma-synthase;protein_id=WP_011191466.1;transl_table=11 NC_009708.1 RefSeq gene 128347 130782 . + . ID=gene129;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YPSIP31758_RS01910;old_locus_tag=YpsIP31758_0122 NC_009708.1 Protein Homology CDS 128347 130782 . + 0 ID=cds123;Parent=gene129;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NC_009708.1 RefSeq gene 131015 131899 . + . ID=gene130;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01915;old_locus_tag=YpsIP31758_0123 NC_009708.1 Protein Homology CDS 131015 131899 . + 0 ID=cds124;Parent=gene130;Dbxref=Genbank:WP_002208933.1;Name=WP_002208933.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NC_009708.1 RefSeq repeat_region 131931 132246 . + . ID=id13;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 132351 132561 . + . ID=id14;gbkey=repeat_region NC_009708.1 RefSeq gene 132720 135356 . - . ID=gene131;Name=YPSIP31758_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01920;old_locus_tag=YpsIP31758_0125 NC_009708.1 Protein Homology CDS 132720 135356 . - 0 ID=cds125;Parent=gene131;Dbxref=Genbank:WP_011191467.1;Name=WP_011191467.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_011191467.1;transl_table=11 NC_009708.1 RefSeq gene 135730 136893 . - . ID=gene132;Name=YPSIP31758_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01925;old_locus_tag=YpsIP31758_0126 NC_009708.1 Protein Homology CDS 135730 136893 . - 0 ID=cds126;Parent=gene132;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NC_009708.1 RefSeq gene 137144 138148 . + . ID=gene133;Name=YPSIP31758_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01930;old_locus_tag=YpsIP31758_0127 NC_009708.1 Protein Homology CDS 137144 138148 . + 0 ID=cds127;Parent=gene133;Dbxref=Genbank:WP_011191468.1;Name=WP_011191468.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_011191468.1;transl_table=11 NC_009708.1 RefSeq gene 138317 139090 . + . ID=gene134;Name=YPSIP31758_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01935;old_locus_tag=YpsIP31758_0128 NC_009708.1 Protein Homology CDS 138317 139090 . + 0 ID=cds128;Parent=gene134;Dbxref=Genbank:WP_002209488.1;Name=WP_002209488.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_002209488.1;transl_table=11 NC_009708.1 RefSeq gene 139257 140630 . + . ID=gene135;Name=YPSIP31758_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01940;old_locus_tag=YpsIP31758_0129 NC_009708.1 Protein Homology CDS 139257 140630 . + 0 ID=cds129;Parent=gene135;Dbxref=Genbank:WP_002209487.1;Name=WP_002209487.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11 NC_009708.1 RefSeq gene 140793 140903 . - . ID=gene136;Name=YPSIP31758_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01945 NC_009708.1 Protein Homology CDS 140793 140903 . - 0 ID=cds130;Parent=gene136;Dbxref=Genbank:WP_038824302.1;Name=WP_038824302.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038824302.1;transl_table=11 NC_009708.1 RefSeq gene 141229 143721 . + . ID=gene137;Name=YPSIP31758_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01950;old_locus_tag=YpsIP31758_0130 NC_009708.1 Protein Homology CDS 141229 143721 . + 0 ID=cds131;Parent=gene137;Dbxref=Genbank:WP_012104282.1;Name=WP_012104282.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_012104282.1;transl_table=11 NC_009708.1 RefSeq gene 143943 144560 . + . ID=gene138;Name=YPSIP31758_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01955;old_locus_tag=YpsIP31758_0131 NC_009708.1 Protein Homology CDS 143943 144560 . + 0 ID=cds132;Parent=gene138;Dbxref=Genbank:WP_012104283.1;Name=WP_012104283.1;gbkey=CDS;product=hemophore HasA;protein_id=WP_012104283.1;transl_table=11 NC_009708.1 RefSeq gene 144726 146534 . + . ID=gene139;Name=YPSIP31758_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01960;old_locus_tag=YpsIP31758_0132 NC_009708.1 Protein Homology CDS 144726 146534 . + 0 ID=cds133;Parent=gene139;Dbxref=Genbank:WP_012104284.1;Name=WP_012104284.1;gbkey=CDS;product=peptidase;protein_id=WP_012104284.1;transl_table=11 NC_009708.1 RefSeq gene 146610 147938 . + . ID=gene140;Name=YPSIP31758_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01965;old_locus_tag=YpsIP31758_0133 NC_009708.1 Protein Homology CDS 146610 147938 . + 0 ID=cds134;Parent=gene140;Dbxref=Genbank:WP_012104285.1;Name=WP_012104285.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_012104285.1;transl_table=11 NC_009708.1 RefSeq gene 148003 148806 . + . ID=gene141;Name=YPSIP31758_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01970;old_locus_tag=YpsIP31758_0134 NC_009708.1 Protein Homology CDS 148003 148806 . + 0 ID=cds135;Parent=gene141;Dbxref=Genbank:WP_012104286.1;Name=WP_012104286.1;gbkey=CDS;product=transporter TonB;protein_id=WP_012104286.1;transl_table=11 NC_009708.1 RefSeq gene 148913 150376 . - . ID=gene142;Name=YPSIP31758_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01975;old_locus_tag=YpsIP31758_0135 NC_009708.1 Protein Homology CDS 148913 150376 . - 0 ID=cds136;Parent=gene142;Dbxref=Genbank:WP_012104287.1;Name=WP_012104287.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_012104287.1;transl_table=11 NC_009708.1 RefSeq gene 150470 151201 . - . ID=gene143;Name=YPSIP31758_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01980;old_locus_tag=YpsIP31758_0136 NC_009708.1 Protein Homology CDS 150470 151201 . - 0 ID=cds137;Parent=gene143;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11 NC_009708.1 RefSeq gene 151348 152265 . + . ID=gene144;Name=YPSIP31758_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01985;old_locus_tag=YpsIP31758_0138 NC_009708.1 Protein Homology CDS 151348 152265 . + 0 ID=cds138;Parent=gene144;Dbxref=Genbank:WP_002209478.1;Name=WP_002209478.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209478.1;transl_table=11 NC_009708.1 RefSeq gene 152248 153648 . - . ID=gene145;Name=YPSIP31758_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01990;old_locus_tag=YpsIP31758_0137 NC_009708.1 Protein Homology CDS 152248 153648 . - 0 ID=cds139;Parent=gene145;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NC_009708.1 RefSeq gene 153866 154501 . + . ID=gene146;Name=YPSIP31758_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01995;old_locus_tag=YpsIP31758_0139 NC_009708.1 Protein Homology CDS 153866 154501 . + 0 ID=cds140;Parent=gene146;Dbxref=Genbank:WP_002209476.1;Name=WP_002209476.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209476.1;transl_table=11 NC_009708.1 RefSeq gene 154514 154921 . + . ID=gene147;Name=YPSIP31758_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02000;old_locus_tag=YpsIP31758_0140 NC_009708.1 Protein Homology CDS 154514 154921 . + 0 ID=cds141;Parent=gene147;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11 NC_009708.1 RefSeq gene 155055 156158 . - . ID=gene148;Name=YPSIP31758_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02005;old_locus_tag=YpsIP31758_0141 NC_009708.1 Protein Homology CDS 155055 156158 . - 0 ID=cds142;Parent=gene148;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11 NC_009708.1 RefSeq gene 156157 156402 . + . ID=gene149;Name=YPSIP31758_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02010 NC_009708.1 Protein Homology CDS 156157 156402 . + 0 ID=cds143;Parent=gene149;Dbxref=Genbank:WP_032465927.1;Name=WP_032465927.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465927.1;transl_table=11 NC_009708.1 RefSeq gene 156638 158512 . + . ID=gene150;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02015;old_locus_tag=YpsIP31758_0142 NC_009708.1 Protein Homology CDS 156638 158512 . + 0 ID=cds144;Parent=gene150;Dbxref=Genbank:WP_024063655.1;Name=WP_024063655.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_024063655.1;transl_table=11 NC_009708.1 RefSeq gene 158457 159320 . + . ID=gene151;Name=YPSIP31758_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02020;old_locus_tag=YpsIP31758_0143 NC_009708.1 Protein Homology CDS 158457 159320 . + 0 ID=cds145;Parent=gene151;Dbxref=Genbank:WP_002228171.1;Name=WP_002228171.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_002228171.1;transl_table=11 NC_009708.1 RefSeq repeat_region 159342 165118 . + . ID=id15;gbkey=repeat_region NC_009708.1 RefSeq gene 159774 161322 . + . ID=gene152;Name=YPSIP31758_RS02030;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS02030;old_locus_tag=YpsIP31758_4193 NC_009708.1 RefSeq rRNA 159774 161322 . + . ID=rna6;Parent=gene152;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq exon 159774 161322 . + . ID=id16;Parent=rna6;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq gene 161456 161531 . + . ID=gene153;Name=YPSIP31758_RS02035;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02035;old_locus_tag=YpsIP31758_4194 NC_009708.1 tRNAscan-SE tRNA 161456 161531 . + . ID=rna7;Parent=gene153;anticodon=(pos:161490..161492);gbkey=tRNA;product=tRNA-Glu NC_009708.1 tRNAscan-SE exon 161456 161531 . + . ID=id17;Parent=rna7;anticodon=(pos:161490..161492);gbkey=tRNA;product=tRNA-Glu NC_009708.1 RefSeq gene 161775 164708 . + . ID=gene154;Name=YPSIP31758_RS02040;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS02040;old_locus_tag=YpsIP31758_4195 NC_009708.1 RefSeq rRNA 161775 164708 . + . ID=rna8;Parent=gene154;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq exon 161775 164708 . + . ID=id18;Parent=rna8;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq gene 164800 164915 . + . ID=gene155;Name=YPSIP31758_RS02045;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS02045;old_locus_tag=YpsIP31758_4196 NC_009708.1 cmsearch rRNA 164800 164915 . + . ID=rna9;Parent=gene155;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 164800 164915 . + . ID=id19;Parent=rna9;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq gene 165041 165117 . + . ID=gene156;Name=YPSIP31758_RS02050;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02050;old_locus_tag=YpsIP31758_4197 NC_009708.1 tRNAscan-SE tRNA 165041 165117 . + . ID=rna10;Parent=gene156;anticodon=(pos:165075..165077);gbkey=tRNA;product=tRNA-Asp NC_009708.1 tRNAscan-SE exon 165041 165117 . + . ID=id20;Parent=rna10;anticodon=(pos:165075..165077);gbkey=tRNA;product=tRNA-Asp NC_009708.1 RefSeq gene 165126 165201 . + . ID=gene157;Name=YPSIP31758_RS02055;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02055;old_locus_tag=YpsIP31758_4198 NC_009708.1 tRNAscan-SE tRNA 165126 165201 . + . ID=rna11;Parent=gene157;anticodon=(pos:165159..165161);gbkey=tRNA;product=tRNA-Trp NC_009708.1 tRNAscan-SE exon 165126 165201 . + . ID=id21;Parent=rna11;anticodon=(pos:165159..165161);gbkey=tRNA;product=tRNA-Trp NC_009708.1 RefSeq gene 165346 165554 . - . ID=gene158;Name=YPSIP31758_RS22525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22525;pseudo=true NC_009708.1 Protein Homology CDS 165346 165554 . - 0 ID=cds146;Parent=gene158;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 166195 167151 . + . ID=gene159;Name=YPSIP31758_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02060;old_locus_tag=YpsIP31758_0147 NC_009708.1 Protein Homology CDS 166195 167151 . + 0 ID=cds147;Parent=gene159;Dbxref=Genbank:WP_002212024.1;Name=WP_002212024.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002212024.1;transl_table=11 NC_009708.1 RefSeq gene 167237 168727 . + . ID=gene160;Name=YPSIP31758_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02065;old_locus_tag=YpsIP31758_0148 NC_009708.1 Protein Homology CDS 167237 168727 . + 0 ID=cds148;Parent=gene160;Dbxref=Genbank:WP_011191480.1;Name=WP_011191480.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011191480.1;transl_table=11 NC_009708.1 RefSeq gene 168760 169758 . + . ID=gene161;Name=YPSIP31758_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02070;old_locus_tag=YpsIP31758_0149 NC_009708.1 Protein Homology CDS 168760 169758 . + 0 ID=cds149;Parent=gene161;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11 NC_009708.1 RefSeq gene 169758 170750 . + . ID=gene162;Name=YPSIP31758_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02075;old_locus_tag=YpsIP31758_0151 NC_009708.1 Protein Homology CDS 169758 170750 . + 0 ID=cds150;Parent=gene162;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11 NC_009708.1 RefSeq gene 170737 171618 . - . ID=gene163;Name=YPSIP31758_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02080;old_locus_tag=YpsIP31758_0150 NC_009708.1 Protein Homology CDS 170737 171618 . - 0 ID=cds151;Parent=gene163;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11 NC_009708.1 RefSeq gene 171737 172075 . + . ID=gene164;Name=YPSIP31758_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02085;old_locus_tag=YpsIP31758_0152 NC_009708.1 Protein Homology CDS 171737 172075 . + 0 ID=cds152;Parent=gene164;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11 NC_009708.1 RefSeq gene 172332 173855 . - . ID=gene165;Name=YPSIP31758_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02090;old_locus_tag=YpsIP31758_0153 NC_009708.1 Protein Homology CDS 172332 173855 . - 0 ID=cds153;Parent=gene165;Dbxref=Genbank:WP_012104288.1;Name=WP_012104288.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATPase;protein_id=WP_012104288.1;transl_table=11 NC_009708.1 RefSeq gene 174479 176125 . + . ID=gene166;Name=YPSIP31758_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02095;old_locus_tag=YpsIP31758_0154 NC_009708.1 Protein Homology CDS 174479 176125 . + 0 ID=cds154;Parent=gene166;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11 NC_009708.1 RefSeq gene 176122 176379 . + . ID=gene167;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02100;old_locus_tag=YpsIP31758_0155 NC_009708.1 Protein Homology CDS 176122 176379 . + 0 ID=cds155;Parent=gene167;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11 NC_009708.1 RefSeq gene 176402 177328 . + . ID=gene168;Name=YPSIP31758_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02105;old_locus_tag=YpsIP31758_0156 NC_009708.1 Protein Homology CDS 176402 177328 . + 0 ID=cds156;Parent=gene168;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11 NC_009708.1 RefSeq gene 177533 179383 . + . ID=gene169;Name=YPSIP31758_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02110;old_locus_tag=YpsIP31758_0157 NC_009708.1 Protein Homology CDS 177533 179383 . + 0 ID=cds157;Parent=gene169;Dbxref=Genbank:WP_012104289.1;Name=WP_012104289.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_012104289.1;transl_table=11 NC_009708.1 RefSeq gene 179389 180933 . + . ID=gene170;Name=YPSIP31758_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02115;old_locus_tag=YpsIP31758_0158 NC_009708.1 Protein Homology CDS 179389 180933 . + 0 ID=cds158;Parent=gene170;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11 NC_009708.1 RefSeq gene 181064 181525 . - . ID=gene171;Name=YPSIP31758_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02120;old_locus_tag=YpsIP31758_0159 NC_009708.1 Protein Homology CDS 181064 181525 . - 0 ID=cds159;Parent=gene171;Dbxref=Genbank:WP_012104290.1;Name=WP_012104290.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104290.1;transl_table=11 NC_009708.1 RefSeq gene 181605 182069 . - . ID=gene172;Name=YPSIP31758_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02125;old_locus_tag=YpsIP31758_0160 NC_009708.1 Protein Homology CDS 181605 182069 . - 0 ID=cds160;Parent=gene172;Dbxref=Genbank:WP_012104291.1;Name=WP_012104291.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104291.1;transl_table=11 NC_009708.1 RefSeq gene 182053 182931 . - . ID=gene173;Name=YPSIP31758_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02130;old_locus_tag=YpsIP31758_0161 NC_009708.1 Protein Homology CDS 182053 182931 . - 0 ID=cds161;Parent=gene173;Dbxref=Genbank:WP_012104292.1;Name=WP_012104292.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104292.1;transl_table=11 NC_009708.1 RefSeq gene 183268 184149 . - . ID=gene174;Name=YPSIP31758_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02135;old_locus_tag=YpsIP31758_0162 NC_009708.1 Protein Homology CDS 183268 184149 . - 0 ID=cds162;Parent=gene174;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11 NC_009708.1 RefSeq gene 184435 185913 . + . ID=gene175;Name=YPSIP31758_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02140;old_locus_tag=YpsIP31758_0163 NC_009708.1 Protein Homology CDS 184435 185913 . + 0 ID=cds163;Parent=gene175;Dbxref=Genbank:WP_011191486.1;Name=WP_011191486.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_011191486.1;transl_table=11 NC_009708.1 RefSeq gene 186093 186290 . + . ID=gene176;Name=YPSIP31758_RS02145;end_range=186290,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS02145;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 186093 186290 . + 0 ID=cds164;Parent=gene176;end_range=186290,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=colicin immunity protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 186501 187502 . + . ID=gene177;Name=YPSIP31758_RS02150;end_range=187502,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS02150;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 186501 187502 . + 0 ID=cds165;Parent=gene177;end_range=187502,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=colicin;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 187479 187898 . + . ID=gene178;Name=YPSIP31758_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02155 NC_009708.1 Protein Homology CDS 187479 187898 . + 0 ID=cds166;Parent=gene178;Dbxref=Genbank:WP_038401669.1;Name=WP_038401669.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_038401669.1;transl_table=11 NC_009708.1 RefSeq gene 187900 188154 . + . ID=gene179;Name=YPSIP31758_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02160;old_locus_tag=YpsIP31758_0165 NC_009708.1 Protein Homology CDS 187900 188154 . + 0 ID=cds167;Parent=gene179;Dbxref=Genbank:WP_012104294.1;Name=WP_012104294.1;gbkey=CDS;product=colicin immunity protein E2;protein_id=WP_012104294.1;transl_table=11 NC_009708.1 RefSeq gene 188607 188765 . - . ID=gene180;Name=YPSIP31758_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02165;old_locus_tag=YpsIP31758_0166 NC_009708.1 Protein Homology CDS 188607 188765 . - 0 ID=cds168;Parent=gene180;Dbxref=Genbank:WP_002212002.1;Name=WP_002212002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212002.1;transl_table=11 NC_009708.1 RefSeq gene 188789 189607 . - . ID=gene181;Name=YPSIP31758_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02170;old_locus_tag=YpsIP31758_0167 NC_009708.1 Protein Homology CDS 188789 189607 . - 0 ID=cds169;Parent=gene181;Dbxref=Genbank:WP_002215825.1;Name=WP_002215825.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002215825.1;transl_table=11 NC_009708.1 RefSeq gene 189573 190850 . - . ID=gene182;Name=YPSIP31758_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02175;old_locus_tag=YpsIP31758_0168 NC_009708.1 Protein Homology CDS 189573 190850 . - 0 ID=cds170;Parent=gene182;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11 NC_009708.1 RefSeq gene 190957 193608 . - . ID=gene183;Name=YPSIP31758_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02180;old_locus_tag=YpsIP31758_0169 NC_009708.1 Protein Homology CDS 190957 193608 . - 0 ID=cds171;Parent=gene183;Dbxref=Genbank:WP_012104295.1;Name=WP_012104295.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_012104295.1;transl_table=11 NC_009708.1 RefSeq gene 193636 194367 . - . ID=gene184;Name=YPSIP31758_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02185;old_locus_tag=YpsIP31758_0170 NC_009708.1 Protein Homology CDS 193636 194367 . - 0 ID=cds172;Parent=gene184;Dbxref=Genbank:WP_011191495.1;Name=WP_011191495.1;gbkey=CDS;product=fimbrial chaperone;protein_id=WP_011191495.1;transl_table=11 NC_009708.1 RefSeq gene 194431 194961 . - . ID=gene185;Name=YPSIP31758_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02190;old_locus_tag=YpsIP31758_0171 NC_009708.1 Protein Homology CDS 194431 194961 . - 0 ID=cds173;Parent=gene185;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NC_009708.1 RefSeq gene 195272 195448 . + . ID=gene186;Name=YPSIP31758_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02195 NC_009708.1 Protein Homology CDS 195272 195448 . + 0 ID=cds174;Parent=gene186;Dbxref=Genbank:WP_002231894.1;Name=WP_002231894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231894.1;transl_table=11 NC_009708.1 RefSeq gene 195753 196544 . - . ID=gene187;Name=YPSIP31758_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02200;old_locus_tag=YpsIP31758_0172 NC_009708.1 Protein Homology CDS 195753 196544 . - 0 ID=cds175;Parent=gene187;Dbxref=Genbank:WP_011191496.1;Name=WP_011191496.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_011191496.1;transl_table=11 NC_009708.1 RefSeq gene 196783 197064 . - . ID=gene188;Name=YPSIP31758_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02205;old_locus_tag=YpsIP31758_0173 NC_009708.1 Protein Homology CDS 196783 197064 . - 0 ID=cds176;Parent=gene188;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11 NC_009708.1 RefSeq gene 197084 197269 . - . ID=gene189;Name=YPSIP31758_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02210 NC_009708.1 Protein Homology CDS 197084 197269 . - 0 ID=cds177;Parent=gene189;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NC_009708.1 RefSeq gene 197268 199289 . + . ID=gene190;Name=YPSIP31758_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02215;old_locus_tag=YpsIP31758_0175 NC_009708.1 Protein Homology CDS 197268 199289 . + 0 ID=cds178;Parent=gene190;Dbxref=Genbank:WP_012104296.1;Name=WP_012104296.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_012104296.1;transl_table=11 NC_009708.1 RefSeq gene 199457 200950 . - . ID=gene191;Name=YPSIP31758_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02220;old_locus_tag=YpsIP31758_0177 NC_009708.1 Protein Homology CDS 199457 200950 . - 0 ID=cds179;Parent=gene191;Dbxref=Genbank:WP_032466602.1;Name=WP_032466602.1;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_032466602.1;transl_table=11 NC_009708.1 RefSeq gene 200957 202243 . - . ID=gene192;Name=YPSIP31758_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02225;old_locus_tag=YpsIP31758_0178 NC_009708.1 Protein Homology CDS 200957 202243 . - 0 ID=cds180;Parent=gene192;Dbxref=Genbank:WP_002228177.1;Name=WP_002228177.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11 NC_009708.1 RefSeq gene 202362 202688 . + . ID=gene193;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02230;old_locus_tag=YpsIP31758_0179 NC_009708.1 Protein Homology CDS 202362 202688 . + 0 ID=cds181;Parent=gene193;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11 NC_009708.1 RefSeq gene 203168 204427 . + . ID=gene194;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02235;old_locus_tag=YpsIP31758_0180 NC_009708.1 Protein Homology CDS 203168 204427 . + 0 ID=cds182;Parent=gene194;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NC_009708.1 RefSeq gene 204564 204761 . + . ID=gene195;Name=YPSIP31758_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02240 NC_009708.1 Protein Homology CDS 204564 204761 . + 0 ID=cds183;Parent=gene195;Dbxref=Genbank:WP_049756378.1;Name=WP_049756378.1;gbkey=CDS;product=transposase;protein_id=WP_049756378.1;transl_table=11 NC_009708.1 RefSeq repeat_region 204606 205321 . + . ID=id22;gbkey=repeat_region NC_009708.1 RefSeq gene 204751 205209 . + . ID=gene196;Name=YPSIP31758_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02245;old_locus_tag=YpsIP31758_0181 NC_009708.1 Protein Homology CDS 204751 205209 . + 0 ID=cds184;Parent=gene196;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 205688 206770 . + . ID=gene197;Name=YPSIP31758_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02250;old_locus_tag=YpsIP31758_0182 NC_009708.1 Protein Homology CDS 205688 206770 . + 0 ID=cds185;Parent=gene197;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11 NC_009708.1 RefSeq gene 206791 207867 . + . ID=gene198;Name=YPSIP31758_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02255;old_locus_tag=YpsIP31758_0183 NC_009708.1 Protein Homology CDS 206791 207867 . + 0 ID=cds186;Parent=gene198;Dbxref=Genbank:WP_002230565.1;Name=WP_002230565.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002230565.1;transl_table=11 NC_009708.1 RefSeq gene 208148 209278 . + . ID=gene199;Name=YPSIP31758_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02260;old_locus_tag=YpsIP31758_0184 NC_009708.1 Protein Homology CDS 208148 209278 . + 0 ID=cds187;Parent=gene199;Dbxref=Genbank:WP_011191498.1;Name=WP_011191498.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_011191498.1;transl_table=11 NC_009708.1 RefSeq gene 209275 210537 . + . ID=gene200;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02265;old_locus_tag=YpsIP31758_0185 NC_009708.1 Protein Homology CDS 209275 210537 . + 0 ID=cds188;Parent=gene200;Dbxref=Genbank:WP_002211985.1;Name=WP_002211985.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NC_009708.1 RefSeq gene 210534 211601 . + . ID=gene201;Name=YPSIP31758_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02270;old_locus_tag=YpsIP31758_0186 NC_009708.1 Protein Homology CDS 210534 211601 . + 0 ID=cds189;Parent=gene201;Dbxref=Genbank:WP_011191500.1;Name=WP_011191500.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_011191500.1;transl_table=11 NC_009708.1 RefSeq gene 211896 212777 . + . ID=gene202;Name=YPSIP31758_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02275;old_locus_tag=YpsIP31758_0187 NC_009708.1 Protein Homology CDS 211896 212777 . + 0 ID=cds190;Parent=gene202;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11 NC_009708.1 RefSeq gene 212755 213492 . + . ID=gene203;Name=YPSIP31758_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02280;old_locus_tag=YpsIP31758_0188 NC_009708.1 Protein Homology CDS 212755 213492 . + 0 ID=cds191;Parent=gene203;Dbxref=Genbank:WP_002211982.1;Name=WP_002211982.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_002211982.1;transl_table=11 NC_009708.1 RefSeq gene 213494 214624 . + . ID=gene204;Name=YPSIP31758_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02285;old_locus_tag=YpsIP31758_0189 NC_009708.1 Protein Homology CDS 213494 214624 . + 0 ID=cds192;Parent=gene204;Dbxref=Genbank:WP_002211981.1;Name=WP_002211981.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_002211981.1;transl_table=11 NC_009708.1 RefSeq gene 214626 215882 . + . ID=gene205;Name=YPSIP31758_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02290;old_locus_tag=YpsIP31758_0190 NC_009708.1 Protein Homology CDS 214626 215882 . + 0 ID=cds193;Parent=gene205;Dbxref=Genbank:WP_012104299.1;Name=WP_012104299.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=translocase;protein_id=WP_012104299.1;transl_table=11 NC_009708.1 RefSeq gene 215905 216990 . + . ID=gene206;Name=YPSIP31758_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02295;old_locus_tag=YpsIP31758_0191 NC_009708.1 Protein Homology CDS 215905 216990 . + 0 ID=cds194;Parent=gene206;Dbxref=Genbank:WP_012104300.1;Name=WP_012104300.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_012104300.1;transl_table=11 NC_009708.1 RefSeq gene 216987 218351 . + . ID=gene207;Name=YPSIP31758_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02300;old_locus_tag=YpsIP31758_0192 NC_009708.1 Protein Homology CDS 216987 218351 . + 0 ID=cds195;Parent=gene207;Dbxref=Genbank:WP_012104301.1;Name=WP_012104301.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=polymerase;protein_id=WP_012104301.1;transl_table=11 NC_009708.1 RefSeq gene 218360 219100 . + . ID=gene208;Name=YPSIP31758_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02305;old_locus_tag=YpsIP31758_0193 NC_009708.1 Protein Homology CDS 218360 219100 . + 0 ID=cds196;Parent=gene208;Dbxref=Genbank:WP_011191504.1;Name=WP_011191504.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_011191504.1;transl_table=11 NC_009708.1 RefSeq repeat_region 219389 219514 . + . ID=id23;gbkey=repeat_region NC_009708.1 RefSeq gene 219639 221030 . + . ID=gene209;Name=YPSIP31758_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02310;old_locus_tag=YpsIP31758_0194 NC_009708.1 Protein Homology CDS 219639 221030 . + 0 ID=cds197;Parent=gene209;Dbxref=Genbank:WP_012104302.1;Name=WP_012104302.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_012104302.1;transl_table=11 NC_009708.1 RefSeq gene 221179 221255 . + . ID=gene210;Name=YPSIP31758_RS02315;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02315;old_locus_tag=YpsIP31758_4199 NC_009708.1 tRNAscan-SE tRNA 221179 221255 . + . ID=rna12;Parent=gene210;anticodon=(pos:221213..221215);gbkey=tRNA;product=tRNA-Arg NC_009708.1 tRNAscan-SE exon 221179 221255 . + . ID=id24;Parent=rna12;anticodon=(pos:221213..221215);gbkey=tRNA;product=tRNA-Arg NC_009708.1 RefSeq gene 221339 221414 . + . ID=gene211;Name=YPSIP31758_RS02320;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02320;old_locus_tag=YpsIP31758_4200 NC_009708.1 tRNAscan-SE tRNA 221339 221414 . + . ID=rna13;Parent=gene211;anticodon=(pos:221372..221374);gbkey=tRNA;product=tRNA-His NC_009708.1 tRNAscan-SE exon 221339 221414 . + . ID=id25;Parent=rna13;anticodon=(pos:221372..221374);gbkey=tRNA;product=tRNA-His NC_009708.1 RefSeq gene 221431 221517 . + . ID=gene212;Name=YPSIP31758_RS02325;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02325;old_locus_tag=YpsIP31758_4201 NC_009708.1 tRNAscan-SE tRNA 221431 221517 . + . ID=rna14;Parent=gene212;anticodon=(pos:221465..221467);gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 221431 221517 . + . ID=id26;Parent=rna14;anticodon=(pos:221465..221467);gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 221593 221669 . + . ID=gene213;Name=YPSIP31758_RS02330;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02330;old_locus_tag=YpsIP31758_4202 NC_009708.1 tRNAscan-SE tRNA 221593 221669 . + . ID=rna15;Parent=gene213;anticodon=(pos:221627..221629);gbkey=tRNA;product=tRNA-Pro NC_009708.1 tRNAscan-SE exon 221593 221669 . + . ID=id27;Parent=rna15;anticodon=(pos:221627..221629);gbkey=tRNA;product=tRNA-Pro NC_009708.1 RefSeq gene 222533 223753 . - . ID=gene214;Name=YPSIP31758_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02335;old_locus_tag=YpsIP31758_0195 NC_009708.1 Protein Homology CDS 222533 223753 . - 0 ID=cds198;Parent=gene214;Dbxref=Genbank:WP_012104303.1;Name=WP_012104303.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_012104303.1;transl_table=11 NC_009708.1 RefSeq gene 223756 224880 . - . ID=gene215;Name=YPSIP31758_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02340;old_locus_tag=YpsIP31758_0196 NC_009708.1 Protein Homology CDS 223756 224880 . - 0 ID=cds199;Parent=gene215;Dbxref=Genbank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211463.1;transl_table=11 NC_009708.1 RefSeq gene 224911 225660 . - . ID=gene216;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02345;old_locus_tag=YpsIP31758_0197 NC_009708.1 Protein Homology CDS 224911 225660 . - 0 ID=cds200;Parent=gene216;Dbxref=Genbank:WP_002211464.1;Name=WP_002211464.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211464.1;transl_table=11 NC_009708.1 RefSeq gene 225657 226598 . - . ID=gene217;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02350;old_locus_tag=YpsIP31758_0198 NC_009708.1 Protein Homology CDS 225657 226598 . - 0 ID=cds201;Parent=gene217;Dbxref=Genbank:WP_002211465.1;Name=WP_002211465.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_002211465.1;transl_table=11 NC_009708.1 RefSeq gene 227092 229644 . + . ID=gene218;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02355;old_locus_tag=YpsIP31758_0201 NC_009708.1 Protein Homology CDS 227092 229644 . + 0 ID=cds202;Parent=gene218;Dbxref=Genbank:WP_012104304.1;Name=WP_012104304.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_012104304.1;transl_table=11 NC_009708.1 RefSeq gene 229735 231243 . - . ID=gene219;Name=YPSIP31758_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02360;old_locus_tag=YpsIP31758_0202 NC_009708.1 Protein Homology CDS 229735 231243 . - 0 ID=cds203;Parent=gene219;Dbxref=Genbank:WP_012104305.1;Name=WP_012104305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104305.1;transl_table=11 NC_009708.1 RefSeq gene 231429 231752 . - . ID=gene220;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02365;old_locus_tag=YpsIP31758_0203 NC_009708.1 Protein Homology CDS 231429 231752 . - 0 ID=cds204;Parent=gene220;Dbxref=Genbank:WP_011191510.1;Name=WP_011191510.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_011191510.1;transl_table=11 NC_009708.1 RefSeq gene 231904 232104 . + . ID=gene221;Name=YPSIP31758_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02370;old_locus_tag=YpsIP31758_0204 NC_009708.1 Protein Homology CDS 231904 232104 . + 0 ID=cds205;Parent=gene221;Dbxref=Genbank:WP_012104306.1;Name=WP_012104306.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104306.1;transl_table=11 NC_009708.1 RefSeq gene 232287 233111 . + . ID=gene222;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02375;old_locus_tag=YpsIP31758_0205 NC_009708.1 Protein Homology CDS 232287 233111 . + 0 ID=cds206;Parent=gene222;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NC_009708.1 RefSeq gene 233176 233880 . + . ID=gene223;Name=YPSIP31758_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02380;old_locus_tag=YpsIP31758_0206 NC_009708.1 Protein Homology CDS 233176 233880 . + 0 ID=cds207;Parent=gene223;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11 NC_009708.1 RefSeq gene 233877 234788 . + . ID=gene224;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02385;old_locus_tag=YpsIP31758_0207 NC_009708.1 Protein Homology CDS 233877 234788 . + 0 ID=cds208;Parent=gene224;Dbxref=Genbank:WP_002211473.1;Name=WP_002211473.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NC_009708.1 RefSeq gene 234788 235504 . + . ID=gene225;Name=YPSIP31758_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02390;old_locus_tag=YpsIP31758_0208 NC_009708.1 Protein Homology CDS 234788 235504 . + 0 ID=cds209;Parent=gene225;Dbxref=Genbank:WP_002211474.1;Name=WP_002211474.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_002211474.1;transl_table=11 NC_009708.1 RefSeq gene 235603 237765 . + . ID=gene226;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02395;old_locus_tag=YpsIP31758_0209 NC_009708.1 Protein Homology CDS 235603 237765 . + 0 ID=cds210;Parent=gene226;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11 NC_009708.1 RefSeq gene 237879 238544 . - . ID=gene227;Name=YPSIP31758_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02400;old_locus_tag=YpsIP31758_0210 NC_009708.1 Protein Homology CDS 237879 238544 . - 0 ID=cds211;Parent=gene227;Dbxref=Genbank:WP_012104307.1;Name=WP_012104307.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_012104307.1;transl_table=11 NC_009708.1 RefSeq gene 238972 240204 . + . ID=gene228;Name=YPSIP31758_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02405;old_locus_tag=YpsIP31758_0211 NC_009708.1 Protein Homology CDS 238972 240204 . + 0 ID=cds212;Parent=gene228;Dbxref=Genbank:WP_012104308.1;Name=WP_012104308.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104308.1;transl_table=11 NC_009708.1 RefSeq gene 240230 241060 . + . ID=gene229;Name=YPSIP31758_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02410;old_locus_tag=YpsIP31758_0212 NC_009708.1 Protein Homology CDS 240230 241060 . + 0 ID=cds213;Parent=gene229;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11 NC_009708.1 RefSeq gene 241709 242659 . + . ID=gene230;Name=YPSIP31758_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02415;old_locus_tag=YpsIP31758_0214 NC_009708.1 Protein Homology CDS 241709 242659 . + 0 ID=cds214;Parent=gene230;Dbxref=Genbank:WP_002211480.1;Name=WP_002211480.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_002211480.1;transl_table=11 NC_009708.1 RefSeq gene 242757 243647 . - . ID=gene231;Name=YPSIP31758_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02420;old_locus_tag=YpsIP31758_0215 NC_009708.1 Protein Homology CDS 242757 243647 . - 0 ID=cds215;Parent=gene231;Dbxref=Genbank:WP_002211481.1;Name=WP_002211481.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_002211481.1;transl_table=11 NC_009708.1 RefSeq gene 243734 244204 . - . ID=gene232;Name=YPSIP31758_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02425;old_locus_tag=YpsIP31758_0216 NC_009708.1 Protein Homology CDS 243734 244204 . - 0 ID=cds216;Parent=gene232;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11 NC_009708.1 RefSeq gene 244426 245304 . + . ID=gene233;Name=YPSIP31758_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02430;old_locus_tag=YpsIP31758_0217 NC_009708.1 Protein Homology CDS 244426 245304 . + 0 ID=cds217;Parent=gene233;Dbxref=Genbank:WP_002211483.1;Name=WP_002211483.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NC_009708.1 RefSeq gene 245381 247213 . + . ID=gene234;Name=YPSIP31758_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02435;old_locus_tag=YpsIP31758_0218 NC_009708.1 Protein Homology CDS 245381 247213 . + 0 ID=cds218;Parent=gene234;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NC_009708.1 RefSeq gene 247320 247940 . + . ID=gene235;Name=YPSIP31758_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02440;old_locus_tag=YpsIP31758_0219 NC_009708.1 Protein Homology CDS 247320 247940 . + 0 ID=cds219;Parent=gene235;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11 NC_009708.1 RefSeq gene 247991 248611 . - . ID=gene236;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02445;old_locus_tag=YpsIP31758_0220 NC_009708.1 Protein Homology CDS 247991 248611 . - 0 ID=cds220;Parent=gene236;Dbxref=Genbank:WP_012104310.1;Name=WP_012104310.1;gbkey=CDS;gene=rhtB;product=threonine transporter RhtB;protein_id=WP_012104310.1;transl_table=11 NC_009708.1 RefSeq gene 248846 249859 . + . ID=gene237;Name=YPSIP31758_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02450;old_locus_tag=YpsIP31758_0221 NC_009708.1 Protein Homology CDS 248846 249859 . + 0 ID=cds221;Parent=gene237;Dbxref=Genbank:WP_041175714.1;Name=WP_041175714.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_041175714.1;transl_table=11 NC_009708.1 RefSeq gene 249894 250703 . + . ID=gene238;Name=YPSIP31758_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02455;old_locus_tag=YpsIP31758_0222 NC_009708.1 Protein Homology CDS 249894 250703 . + 0 ID=cds222;Parent=gene238;Dbxref=Genbank:WP_012104312.1;Name=WP_012104312.1;gbkey=CDS;product=hydrolase;protein_id=WP_012104312.1;transl_table=11 NC_009708.1 RefSeq gene 251090 252313 . + . ID=gene239;Name=YPSIP31758_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02460;old_locus_tag=YpsIP31758_0223 NC_009708.1 Protein Homology CDS 251090 252313 . + 0 ID=cds223;Parent=gene239;Dbxref=Genbank:WP_041175715.1;Name=WP_041175715.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_041175715.1;transl_table=11 NC_009708.1 RefSeq gene 252387 253502 . - . ID=gene240;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02465;old_locus_tag=YpsIP31758_0224 NC_009708.1 Protein Homology CDS 252387 253502 . - 0 ID=cds224;Parent=gene240;Dbxref=Genbank:WP_012104314.1;Name=WP_012104314.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_012104314.1;transl_table=11 NC_009708.1 RefSeq gene 253689 255041 . - . ID=gene241;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02470;old_locus_tag=YpsIP31758_0225 NC_009708.1 Protein Homology CDS 253689 255041 . - 0 ID=cds225;Parent=gene241;Dbxref=Genbank:WP_012104315.1;Name=WP_012104315.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;product=sn-glycerol-3-phosphate transporter;protein_id=WP_012104315.1;transl_table=11 NC_009708.1 RefSeq gene 255422 257077 . + . ID=gene242;Name=YPSIP31758_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02475;old_locus_tag=YpsIP31758_0227 NC_009708.1 Protein Homology CDS 255422 257077 . + 0 ID=cds226;Parent=gene242;Dbxref=Genbank:WP_012104317.1;Name=WP_012104317.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_012104317.1;transl_table=11 NC_009708.1 RefSeq gene 257067 258341 . + . ID=gene243;Name=YPSIP31758_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02480;old_locus_tag=YpsIP31758_0228 NC_009708.1 Protein Homology CDS 257067 258341 . + 0 ID=cds227;Parent=gene243;Dbxref=Genbank:WP_012104318.1;Name=WP_012104318.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_012104318.1;transl_table=11 NC_009708.1 RefSeq gene 258338 259633 . + . ID=gene244;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02485;old_locus_tag=YpsIP31758_0229 NC_009708.1 Protein Homology CDS 258338 259633 . + 0 ID=cds228;Parent=gene244;Dbxref=Genbank:WP_033849627.1;Name=WP_033849627.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_033849627.1;transl_table=11 NC_009708.1 RefSeq gene 259795 260322 . - . ID=gene245;Name=YPSIP31758_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02490;old_locus_tag=YpsIP31758_0230 NC_009708.1 Protein Homology CDS 259795 260322 . - 0 ID=cds229;Parent=gene245;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11 NC_009708.1 RefSeq gene 260452 261120 . - . ID=gene246;Name=YPSIP31758_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02495;old_locus_tag=YpsIP31758_0231 NC_009708.1 Protein Homology CDS 260452 261120 . - 0 ID=cds230;Parent=gene246;Dbxref=Genbank:WP_011191518.1;Name=WP_011191518.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191518.1;transl_table=11 NC_009708.1 RefSeq gene 261381 261635 . + . ID=gene247;Name=YPSIP31758_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02500;old_locus_tag=YpsIP31758_0232 NC_009708.1 Protein Homology CDS 261381 261635 . + 0 ID=cds231;Parent=gene247;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NC_009708.1 RefSeq gene 261684 264050 . - . ID=gene248;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02505;old_locus_tag=YpsIP31758_0233 NC_009708.1 Protein Homology CDS 261684 264050 . - 0 ID=cds232;Parent=gene248;Dbxref=Genbank:WP_012104321.1;Name=WP_012104321.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=cadmium-transporting ATPase;protein_id=WP_012104321.1;transl_table=11 NC_009708.1 RefSeq gene 264464 265090 . - . ID=gene249;Name=YPSIP31758_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02510;old_locus_tag=YpsIP31758_0234 NC_009708.1 Protein Homology CDS 264464 265090 . - 0 ID=cds233;Parent=gene249;Dbxref=Genbank:WP_012104322.1;Name=WP_012104322.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104322.1;transl_table=11 NC_009708.1 RefSeq gene 265380 265700 . + . ID=gene250;Name=YPSIP31758_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02515;old_locus_tag=YpsIP31758_0235 NC_009708.1 Protein Homology CDS 265380 265700 . + 0 ID=cds234;Parent=gene250;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11 NC_009708.1 RefSeq gene 265912 266331 . + . ID=gene251;Name=YPSIP31758_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02520;old_locus_tag=YpsIP31758_0236 NC_009708.1 Protein Homology CDS 265912 266331 . + 0 ID=cds235;Parent=gene251;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11 NC_009708.1 RefSeq repeat_region 266400 266501 . + . ID=id28;gbkey=repeat_region NC_009708.1 RefSeq gene 266518 266790 . - . ID=gene252;Name=YPSIP31758_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02525;old_locus_tag=YpsIP31758_0237 NC_009708.1 Protein Homology CDS 266518 266790 . - 0 ID=cds236;Parent=gene252;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11 NC_009708.1 RefSeq gene 266780 267442 . - . ID=gene253;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02530;old_locus_tag=YpsIP31758_0238 NC_009708.1 Protein Homology CDS 266780 267442 . - 0 ID=cds237;Parent=gene253;Dbxref=Genbank:WP_002211502.1;Name=WP_002211502.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_002211502.1;transl_table=11 NC_009708.1 RefSeq gene 267552 267695 . - . ID=gene254;Name=YPSIP31758_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02535 NC_009708.1 Protein Homology CDS 267552 267695 . - 0 ID=cds238;Parent=gene254;Dbxref=Genbank:WP_002215975.1;Name=WP_002215975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215975.1;transl_table=11 NC_009708.1 RefSeq gene 267724 269349 . + . ID=gene255;Name=YPSIP31758_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02540;old_locus_tag=YpsIP31758_0239 NC_009708.1 Protein Homology CDS 267724 269349 . + 0 ID=cds239;Parent=gene255;Dbxref=Genbank:WP_012104323.1;Name=WP_012104323.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_012104323.1;transl_table=11 NC_009708.1 RefSeq gene 269355 270023 . + . ID=gene256;Name=YPSIP31758_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02545;old_locus_tag=YpsIP31758_0240 NC_009708.1 Protein Homology CDS 269355 270023 . + 0 ID=cds240;Parent=gene256;Dbxref=Genbank:WP_002211504.1;Name=WP_002211504.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_002211504.1;transl_table=11 NC_009708.1 RefSeq gene 270013 270966 . + . ID=gene257;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02550;old_locus_tag=YpsIP31758_0241 NC_009708.1 Protein Homology CDS 270013 270966 . + 0 ID=cds241;Parent=gene257;Dbxref=Genbank:WP_002211505.1;Name=WP_002211505.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NC_009708.1 RefSeq gene 271277 272134 . + . ID=gene258;Name=YPSIP31758_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02555;old_locus_tag=YpsIP31758_0242 NC_009708.1 Protein Homology CDS 271277 272134 . + 0 ID=cds242;Parent=gene258;Dbxref=Genbank:WP_012104324.1;Name=WP_012104324.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_012104324.1;transl_table=11 NC_009708.1 RefSeq gene 272337 272729 . - . ID=gene259;Name=YPSIP31758_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02560;old_locus_tag=YpsIP31758_0243 NC_009708.1 Protein Homology CDS 272337 272729 . - 0 ID=cds243;Parent=gene259;Dbxref=Genbank:WP_012104325.1;Name=WP_012104325.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_012104325.1;transl_table=11 NC_009708.1 RefSeq gene 273152 274267 . + . ID=gene260;Name=YPSIP31758_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02565;old_locus_tag=YpsIP31758_0244 NC_009708.1 Protein Homology CDS 273152 274267 . + 0 ID=cds244;Parent=gene260;Dbxref=Genbank:WP_012104326.1;Name=WP_012104326.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_012104326.1;transl_table=11 NC_009708.1 RefSeq gene 274448 275374 . + . ID=gene261;Name=YPSIP31758_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02570;old_locus_tag=YpsIP31758_0245 NC_009708.1 Protein Homology CDS 274448 275374 . + 0 ID=cds245;Parent=gene261;Dbxref=Genbank:WP_002211509.1;Name=WP_002211509.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_002211509.1;transl_table=11 NC_009708.1 RefSeq gene 275371 276657 . + . ID=gene262;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02575;old_locus_tag=YpsIP31758_0246 NC_009708.1 Protein Homology CDS 275371 276657 . + 0 ID=cds246;Parent=gene262;Dbxref=Genbank:WP_012104327.1;Name=WP_012104327.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_012104327.1;transl_table=11 NC_009708.1 RefSeq gene 276654 277421 . + . ID=gene263;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02580;old_locus_tag=YpsIP31758_0247 NC_009708.1 Protein Homology CDS 276654 277421 . + 0 ID=cds247;Parent=gene263;Dbxref=Genbank:WP_011191524.1;Name=WP_011191524.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_011191524.1;transl_table=11 NC_009708.1 RefSeq gene 277466 278167 . + . ID=gene264;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02585;old_locus_tag=YpsIP31758_0248 NC_009708.1 Protein Homology CDS 277466 278167 . + 0 ID=cds248;Parent=gene264;Dbxref=Genbank:WP_012104328.1;Name=WP_012104328.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_012104328.1;transl_table=11 NC_009708.1 RefSeq gene 278395 278856 . + . ID=gene265;Name=YPSIP31758_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02590;old_locus_tag=YpsIP31758_0249 NC_009708.1 Protein Homology CDS 278395 278856 . + 0 ID=cds249;Parent=gene265;Dbxref=Genbank:WP_012104329.1;Name=WP_012104329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104329.1;transl_table=11 NC_009708.1 RefSeq gene 278971 280077 . - . ID=gene266;Name=YPSIP31758_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02595;old_locus_tag=YpsIP31758_0250 NC_009708.1 Protein Homology CDS 278971 280077 . - 0 ID=cds250;Parent=gene266;Dbxref=Genbank:WP_012104330.1;Name=WP_012104330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104330.1;transl_table=11 NC_009708.1 RefSeq gene 280218 280736 . - . ID=gene267;Name=YPSIP31758_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02600;old_locus_tag=YpsIP31758_0251 NC_009708.1 Protein Homology CDS 280218 280736 . - 0 ID=cds251;Parent=gene267;Dbxref=Genbank:WP_012104331.1;Name=WP_012104331.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104331.1;transl_table=11 NC_009708.1 RefSeq gene 280798 281445 . - . ID=gene268;Name=YPSIP31758_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02605;old_locus_tag=YpsIP31758_0252 NC_009708.1 Protein Homology CDS 280798 281445 . - 0 ID=cds252;Parent=gene268;Dbxref=Genbank:WP_012104332.1;Name=WP_012104332.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104332.1;transl_table=11 NC_009708.1 RefSeq gene 281417 282103 . - . ID=gene269;Name=YPSIP31758_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02610;old_locus_tag=YpsIP31758_0253 NC_009708.1 Protein Homology CDS 281417 282103 . - 0 ID=cds253;Parent=gene269;Dbxref=Genbank:WP_012104333.1;Name=WP_012104333.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_012104333.1;transl_table=11 NC_009708.1 RefSeq gene 282121 284436 . - . ID=gene270;Name=YPSIP31758_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02615;old_locus_tag=YpsIP31758_0254 NC_009708.1 Protein Homology CDS 282121 284436 . - 0 ID=cds254;Parent=gene270;Dbxref=Genbank:WP_012104334.1;Name=WP_012104334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104334.1;transl_table=11 NC_009708.1 RefSeq gene 284703 285194 . - . ID=gene271;Name=YPSIP31758_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02620;old_locus_tag=YpsIP31758_0255 NC_009708.1 Protein Homology CDS 284703 285194 . - 0 ID=cds255;Parent=gene271;Dbxref=Genbank:WP_033849767.1;Name=WP_033849767.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033849767.1;transl_table=11 NC_009708.1 RefSeq gene 285749 287068 . + . ID=gene272;Name=YPSIP31758_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02625;old_locus_tag=YpsIP31758_0256 NC_009708.1 Protein Homology CDS 285749 287068 . + 0 ID=cds256;Parent=gene272;Dbxref=Genbank:WP_012104336.1;Name=WP_012104336.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_012104336.1;transl_table=11 NC_009708.1 RefSeq gene 287366 288253 . + . ID=gene273;Name=YPSIP31758_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02630;old_locus_tag=YpsIP31758_0257 NC_009708.1 Protein Homology CDS 287366 288253 . + 0 ID=cds257;Parent=gene273;Dbxref=Genbank:WP_012104337.1;Name=WP_012104337.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_012104337.1;transl_table=11 NC_009708.1 RefSeq gene 288250 289095 . + . ID=gene274;Name=YPSIP31758_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02635;old_locus_tag=YpsIP31758_0258 NC_009708.1 Protein Homology CDS 288250 289095 . + 0 ID=cds258;Parent=gene274;Dbxref=Genbank:WP_002211522.1;Name=WP_002211522.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211522.1;transl_table=11 NC_009708.1 RefSeq gene 289102 290175 . + . ID=gene275;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02640;old_locus_tag=YpsIP31758_0259 NC_009708.1 Protein Homology CDS 289102 290175 . + 0 ID=cds259;Parent=gene275;Dbxref=Genbank:WP_011191533.1;Name=WP_011191533.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_011191533.1;transl_table=11 NC_009708.1 RefSeq gene 290172 290921 . + . ID=gene276;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02645;old_locus_tag=YpsIP31758_0260 NC_009708.1 Protein Homology CDS 290172 290921 . + 0 ID=cds260;Parent=gene276;Dbxref=Genbank:WP_011191534.1;Name=WP_011191534.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_011191534.1;transl_table=11 NC_009708.1 RefSeq gene 291022 291978 . + . ID=gene277;Name=YPSIP31758_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02650;old_locus_tag=YpsIP31758_0261 NC_009708.1 Protein Homology CDS 291022 291978 . + 0 ID=cds261;Parent=gene277;Dbxref=Genbank:WP_012104338.1;Name=WP_012104338.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104338.1;transl_table=11 NC_009708.1 RefSeq gene 292332 293231 . + . ID=gene278;Name=YPSIP31758_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02655;old_locus_tag=YpsIP31758_0263 NC_009708.1 Protein Homology CDS 292332 293231 . + 0 ID=cds262;Parent=gene278;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11 NC_009708.1 RefSeq gene 293119 294072 . - . ID=gene279;Name=YPSIP31758_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02660;old_locus_tag=YpsIP31758_0262 NC_009708.1 Protein Homology CDS 293119 294072 . - 0 ID=cds263;Parent=gene279;Dbxref=Genbank:WP_011191537.1;Name=WP_011191537.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191537.1;transl_table=11 NC_009708.1 RefSeq gene 294163 296454 . + . ID=gene280;Name=YPSIP31758_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02665;old_locus_tag=YpsIP31758_0264 NC_009708.1 Protein Homology CDS 294163 296454 . + 0 ID=cds264;Parent=gene280;Dbxref=Genbank:WP_041175716.1;Name=WP_041175716.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_041175716.1;transl_table=11 NC_009708.1 RefSeq gene 296509 297381 . - . ID=gene281;Name=YPSIP31758_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02670;old_locus_tag=YpsIP31758_0265 NC_009708.1 Protein Homology CDS 296509 297381 . - 0 ID=cds265;Parent=gene281;Dbxref=Genbank:WP_012104340.1;Name=WP_012104340.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_012104340.1;transl_table=11 NC_009708.1 RefSeq gene 297808 298569 . + . ID=gene282;Name=YPSIP31758_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02675;old_locus_tag=YpsIP31758_0266 NC_009708.1 Protein Homology CDS 297808 298569 . + 0 ID=cds266;Parent=gene282;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NC_009708.1 RefSeq gene 298690 299565 . + . ID=gene283;Name=YPSIP31758_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02680;old_locus_tag=YpsIP31758_0267 NC_009708.1 Protein Homology CDS 298690 299565 . + 0 ID=cds267;Parent=gene283;Dbxref=Genbank:WP_041175717.1;Name=WP_041175717.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_041175717.1;transl_table=11 NC_009708.1 RefSeq gene 299915 301726 . + . ID=gene284;Name=YPSIP31758_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02685;old_locus_tag=YpsIP31758_0268 NC_009708.1 Protein Homology CDS 299915 301726 . + 0 ID=cds268;Parent=gene284;Dbxref=Genbank:WP_012104342.1;Name=WP_012104342.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_012104342.1;transl_table=11 NC_009708.1 RefSeq repeat_region 301828 302130 . + . ID=id29;gbkey=repeat_region NC_009708.1 RefSeq gene 302246 302776 . + . ID=gene285;Name=YPSIP31758_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02690;old_locus_tag=YpsIP31758_0269 NC_009708.1 Protein Homology CDS 302246 302776 . + 0 ID=cds269;Parent=gene285;Dbxref=Genbank:WP_002211531.1;Name=WP_002211531.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002211531.1;transl_table=11 NC_009708.1 RefSeq gene 302984 304489 . + . ID=gene286;Name=YPSIP31758_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02695;old_locus_tag=YpsIP31758_0270 NC_009708.1 Protein Homology CDS 302984 304489 . + 0 ID=cds270;Parent=gene286;Dbxref=Genbank:WP_012104343.1;Name=WP_012104343.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_012104343.1;transl_table=11 NC_009708.1 RefSeq gene 304581 305336 . + . ID=gene287;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02700;old_locus_tag=YpsIP31758_0271 NC_009708.1 Protein Homology CDS 304581 305336 . + 0 ID=cds271;Parent=gene287;Dbxref=Genbank:WP_002224024.1;Name=WP_002224024.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002224024.1;transl_table=11 NC_009708.1 RefSeq gene 305350 306000 . + . ID=gene288;Name=YPSIP31758_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02705;old_locus_tag=YpsIP31758_0272 NC_009708.1 Protein Homology CDS 305350 306000 . + 0 ID=cds272;Parent=gene288;Dbxref=Genbank:WP_041175718.1;Name=WP_041175718.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175718.1;transl_table=11 NC_009708.1 RefSeq gene 306000 307631 . + . ID=gene289;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=YPSIP31758_RS02710;old_locus_tag=YpsIP31758_0273 NC_009708.1 Protein Homology CDS 306000 307631 . + 0 ID=cds273;Parent=gene289;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11 NC_009708.1 RefSeq gene 307811 308077 . + . ID=gene290;Name=YPSIP31758_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02715;old_locus_tag=YpsIP31758_0274 NC_009708.1 Protein Homology CDS 307811 308077 . + 0 ID=cds274;Parent=gene290;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11 NC_009708.1 RefSeq gene 308081 308743 . + . ID=gene291;Name=YPSIP31758_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02720;old_locus_tag=YpsIP31758_0275 NC_009708.1 Protein Homology CDS 308081 308743 . + 0 ID=cds275;Parent=gene291;Dbxref=Genbank:WP_002211537.1;Name=WP_002211537.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_002211537.1;transl_table=11 NC_009708.1 RefSeq gene 308746 309522 . + . ID=gene292;Name=YPSIP31758_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02725;old_locus_tag=YpsIP31758_0276 NC_009708.1 Protein Homology CDS 308746 309522 . + 0 ID=cds276;Parent=gene292;Dbxref=Genbank:WP_011191543.1;Name=WP_011191543.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_011191543.1;transl_table=11 NC_009708.1 RefSeq gene 309578 310360 . + . ID=gene293;Name=YPSIP31758_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02730;old_locus_tag=YpsIP31758_0277 NC_009708.1 Protein Homology CDS 309578 310360 . + 0 ID=cds277;Parent=gene293;Dbxref=Genbank:WP_012104345.1;Name=WP_012104345.1;Note=magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system;gbkey=CDS;product=DNase TatD;protein_id=WP_012104345.1;transl_table=11 NC_009708.1 RefSeq gene 310375 311397 . + . ID=gene294;Name=YPSIP31758_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02735;old_locus_tag=YpsIP31758_0278 NC_009708.1 Protein Homology CDS 310375 311397 . + 0 ID=cds278;Parent=gene294;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11 NC_009708.1 RefSeq gene 311507 311995 . - . ID=gene295;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02740;old_locus_tag=YpsIP31758_0279 NC_009708.1 Protein Homology CDS 311507 311995 . - 0 ID=cds279;Parent=gene295;Dbxref=Genbank:WP_011191545.1;Name=WP_011191545.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_011191545.1;transl_table=11 NC_009708.1 RefSeq gene 312243 313739 . + . ID=gene296;Name=YPSIP31758_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02745;old_locus_tag=YpsIP31758_0280 NC_009708.1 Protein Homology CDS 312243 313739 . + 0 ID=cds280;Parent=gene296;Dbxref=Genbank:WP_011191546.1;Name=WP_011191546.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_011191546.1;transl_table=11 NC_009708.1 RefSeq gene 313794 314495 . + . ID=gene297;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=YPSIP31758_RS02750;old_locus_tag=YpsIP31758_0281 NC_009708.1 Protein Homology CDS 313794 314495 . + 0 ID=cds281;Parent=gene297;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11 NC_009708.1 RefSeq gene 314638 315801 . - . ID=gene298;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02755;old_locus_tag=YpsIP31758_0282 NC_009708.1 Protein Homology CDS 314638 315801 . - 0 ID=cds282;Parent=gene298;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11 NC_009708.1 RefSeq gene 315813 318002 . - . ID=gene299;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02760;old_locus_tag=YpsIP31758_0283 NC_009708.1 Protein Homology CDS 315813 318002 . - 0 ID=cds283;Parent=gene299;Dbxref=Genbank:WP_012104346.1;Name=WP_012104346.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_012104346.1;transl_table=11 NC_009708.1 RefSeq gene 318329 319660 . + . ID=gene300;Name=YPSIP31758_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02765;old_locus_tag=YpsIP31758_0284 NC_009708.1 Protein Homology CDS 318329 319660 . + 0 ID=cds284;Parent=gene300;Dbxref=Genbank:WP_011191548.1;Name=WP_011191548.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_011191548.1;transl_table=11 NC_009708.1 RefSeq gene 319660 320271 . + . ID=gene301;Name=YPSIP31758_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02770;old_locus_tag=YpsIP31758_0285 NC_009708.1 Protein Homology CDS 319660 320271 . + 0 ID=cds285;Parent=gene301;Dbxref=Genbank:WP_002231137.1;Name=WP_002231137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231137.1;transl_table=11 NC_009708.1 RefSeq gene 320311 321762 . + . ID=gene302;Name=YPSIP31758_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02775;old_locus_tag=YpsIP31758_0286 NC_009708.1 Protein Homology CDS 320311 321762 . + 0 ID=cds286;Parent=gene302;Dbxref=Genbank:WP_012104347.1;Name=WP_012104347.1;gbkey=CDS;product=potassium transporter;protein_id=WP_012104347.1;transl_table=11 NC_009708.1 RefSeq gene 321784 322317 . + . ID=gene303;Name=YPSIP31758_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02780;old_locus_tag=YpsIP31758_0287 NC_009708.1 Protein Homology CDS 321784 322317 . + 0 ID=cds287;Parent=gene303;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11 NC_009708.1 RefSeq repeat_region 322343 327997 . + . ID=id30;gbkey=repeat_region NC_009708.1 RefSeq gene 322789 324337 . + . ID=gene304;Name=YPSIP31758_RS02790;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS02790;old_locus_tag=YpsIP31758_4203 NC_009708.1 RefSeq rRNA 322789 324337 . + . ID=rna16;Parent=gene304;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq exon 322789 324337 . + . ID=id31;Parent=rna16;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq gene 324437 324513 . + . ID=gene305;Name=YPSIP31758_RS02795;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02795;old_locus_tag=YpsIP31758_4204 NC_009708.1 tRNAscan-SE tRNA 324437 324513 . + . ID=rna17;Parent=gene305;anticodon=(pos:324471..324473);gbkey=tRNA;product=tRNA-Ile NC_009708.1 tRNAscan-SE exon 324437 324513 . + . ID=id32;Parent=rna17;anticodon=(pos:324471..324473);gbkey=tRNA;product=tRNA-Ile NC_009708.1 RefSeq gene 324565 324640 . + . ID=gene306;Name=YPSIP31758_RS02800;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02800;old_locus_tag=YpsIP31758_4205 NC_009708.1 tRNAscan-SE tRNA 324565 324640 . + . ID=rna18;Parent=gene306;anticodon=(pos:324598..324600);gbkey=tRNA;product=tRNA-Ala NC_009708.1 tRNAscan-SE exon 324565 324640 . + . ID=id33;Parent=rna18;anticodon=(pos:324598..324600);gbkey=tRNA;product=tRNA-Ala NC_009708.1 RefSeq gene 324850 327783 . + . ID=gene307;Name=YPSIP31758_RS02805;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS02805;old_locus_tag=YpsIP31758_4206 NC_009708.1 RefSeq rRNA 324850 327783 . + . ID=rna19;Parent=gene307;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq exon 324850 327783 . + . ID=id34;Parent=rna19;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq gene 327875 327990 . + . ID=gene308;Name=YPSIP31758_RS02810;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS02810;old_locus_tag=YpsIP31758_4300 NC_009708.1 cmsearch rRNA 327875 327990 . + . ID=rna20;Parent=gene308;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 327875 327990 . + . ID=id35;Parent=rna20;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq gene 328006 328081 . + . ID=gene309;Name=YPSIP31758_RS02815;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS02815;old_locus_tag=YpsIP31758_4207 NC_009708.1 tRNAscan-SE tRNA 328006 328081 . + . ID=rna21;Parent=gene309;anticodon=(pos:328039..328041);gbkey=tRNA;product=tRNA-Thr NC_009708.1 tRNAscan-SE exon 328006 328081 . + . ID=id36;Parent=rna21;anticodon=(pos:328039..328041);gbkey=tRNA;product=tRNA-Thr NC_009708.1 RefSeq repeat_region 328114 328247 . + . ID=id37;gbkey=repeat_region NC_009708.1 RefSeq gene 328122 328237 . + . ID=gene310;Name=YPSIP31758_RS02820;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS02820;old_locus_tag=YpsIP31758_4208 NC_009708.1 cmsearch rRNA 328122 328237 . + . ID=rna22;Parent=gene310;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 328122 328237 . + . ID=id38;Parent=rna22;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq repeat_region 328537 329852 . + . ID=id39;gbkey=repeat_region NC_009708.1 RefSeq gene 328572 329780 . - . ID=gene311;Name=YPSIP31758_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02825;old_locus_tag=YpsIP31758_0291 NC_009708.1 Protein Homology CDS 328572 329780 . - 0 ID=cds288;Parent=gene311;Dbxref=Genbank:WP_011991005.1;Name=WP_011991005.1;gbkey=CDS;product=transposase;protein_id=WP_011991005.1;transl_table=11 NC_009708.1 RefSeq gene 329959 330231 . - . ID=gene312;Name=YPSIP31758_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02830 NC_009708.1 Protein Homology CDS 329959 330231 . - 0 ID=cds289;Parent=gene312;Dbxref=Genbank:WP_012303443.1;Name=WP_012303443.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303443.1;transl_table=11 NC_009708.1 RefSeq gene 330299 331228 . + . ID=gene313;Name=YPSIP31758_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02835;old_locus_tag=YpsIP31758_0292 NC_009708.1 Protein Homology CDS 330299 331228 . + 0 ID=cds290;Parent=gene313;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11 NC_009708.1 RefSeq gene 331648 333246 . + . ID=gene314;Name=YPSIP31758_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02840;old_locus_tag=YpsIP31758_0294 NC_009708.1 Protein Homology CDS 331648 333246 . + 0 ID=cds291;Parent=gene314;Dbxref=Genbank:WP_012104348.1;Name=WP_012104348.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_012104348.1;transl_table=11 NC_009708.1 RefSeq gene 333293 334600 . + . ID=gene315;Name=YPSIP31758_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02845;old_locus_tag=YpsIP31758_0295 NC_009708.1 Protein Homology CDS 333293 334600 . + 0 ID=cds292;Parent=gene315;Dbxref=Genbank:WP_011193211.1;Name=WP_011193211.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_011193211.1;transl_table=11 NC_009708.1 RefSeq repeat_region 334641 334818 . + . ID=id40;gbkey=repeat_region NC_009708.1 RefSeq gene 334856 336583 . + . ID=gene316;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02850;old_locus_tag=YpsIP31758_0296 NC_009708.1 Protein Homology CDS 334856 336583 . + 0 ID=cds293;Parent=gene316;Dbxref=Genbank:WP_002212079.1;Name=WP_002212079.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_002212079.1;transl_table=11 NC_009708.1 RefSeq gene 336703 337545 . - . ID=gene317;Name=YPSIP31758_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02855;old_locus_tag=YpsIP31758_0297 NC_009708.1 Protein Homology CDS 336703 337545 . - 0 ID=cds294;Parent=gene317;Dbxref=Genbank:WP_002230619.1;Name=WP_002230619.1;Note=regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002230619.1;transl_table=11 NC_009708.1 RefSeq gene 337760 341455 . + . ID=gene318;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02860;old_locus_tag=YpsIP31758_0298 NC_009708.1 Protein Homology CDS 337760 341455 . + 0 ID=cds295;Parent=gene318;Dbxref=Genbank:WP_041175719.1;Name=WP_041175719.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_041175719.1;transl_table=11 NC_009708.1 RefSeq gene 341552 346408 . - . ID=gene319;Name=YPSIP31758_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02865;old_locus_tag=YpsIP31758_0299 NC_009708.1 Protein Homology CDS 341552 346408 . - 0 ID=cds296;Parent=gene319;Dbxref=Genbank:WP_012104352.1;Name=WP_012104352.1;gbkey=CDS;product=hemolysin;protein_id=WP_012104352.1;transl_table=11 NC_009708.1 RefSeq gene 346478 348166 . - . ID=gene320;Name=YPSIP31758_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02870;old_locus_tag=YpsIP31758_0300 NC_009708.1 Protein Homology CDS 346478 348166 . - 0 ID=cds297;Parent=gene320;Dbxref=Genbank:WP_012104353.1;Name=WP_012104353.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_012104353.1;transl_table=11 NC_009708.1 RefSeq gene 348611 349996 . - . ID=gene321;Name=YPSIP31758_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02875;old_locus_tag=YpsIP31758_0301 NC_009708.1 Protein Homology CDS 348611 349996 . - 0 ID=cds298;Parent=gene321;Dbxref=Genbank:WP_011193207.1;Name=WP_011193207.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_011193207.1;transl_table=11 NC_009708.1 RefSeq gene 350366 352012 . + . ID=gene322;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02880;old_locus_tag=YpsIP31758_0302 NC_009708.1 Protein Homology CDS 350366 352012 . + 0 ID=cds299;Parent=gene322;Dbxref=Genbank:WP_002212085.1;Name=WP_002212085.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NC_009708.1 RefSeq gene 352139 352546 . + . ID=gene323;Name=YPSIP31758_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02885;old_locus_tag=YpsIP31758_0303 NC_009708.1 Protein Homology CDS 352139 352546 . + 0 ID=cds300;Parent=gene323;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11 NC_009708.1 RefSeq gene 352689 353579 . - . ID=gene324;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02890;old_locus_tag=YpsIP31758_0304 NC_009708.1 Protein Homology CDS 352689 353579 . - 0 ID=cds301;Parent=gene324;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11 NC_009708.1 RefSeq gene 353593 355170 . - . ID=gene325;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02895;old_locus_tag=YpsIP31758_0305 NC_009708.1 Protein Homology CDS 353593 355170 . - 0 ID=cds302;Parent=gene325;Dbxref=Genbank:WP_011193206.1;Name=WP_011193206.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_011193206.1;transl_table=11 NC_009708.1 RefSeq gene 355357 356568 . - . ID=gene326;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02900;old_locus_tag=YpsIP31758_0306 NC_009708.1 Protein Homology CDS 355357 356568 . - 0 ID=cds303;Parent=gene326;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11 NC_009708.1 RefSeq gene 357165 357392 . + . ID=gene327;Name=YPSIP31758_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02905 NC_009708.1 Protein Homology CDS 357165 357392 . + 0 ID=cds304;Parent=gene327;Dbxref=Genbank:WP_042593159.1;Name=WP_042593159.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042593159.1;transl_table=11 NC_009708.1 RefSeq gene 357396 358505 . + . ID=gene328;Name=YPSIP31758_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02910;old_locus_tag=YpsIP31758_0308 NC_009708.1 Protein Homology CDS 357396 358505 . + 0 ID=cds305;Parent=gene328;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NC_009708.1 RefSeq gene 358576 359847 . + . ID=gene329;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02915;old_locus_tag=YpsIP31758_0309 NC_009708.1 Protein Homology CDS 358576 359847 . + 0 ID=cds306;Parent=gene329;Dbxref=Genbank:WP_002212092.1;Name=WP_002212092.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NC_009708.1 RefSeq gene 360088 360999 . + . ID=gene330;Name=YPSIP31758_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02920;old_locus_tag=YpsIP31758_0310 NC_009708.1 Protein Homology CDS 360088 360999 . + 0 ID=cds307;Parent=gene330;Dbxref=Genbank:WP_012104355.1;Name=WP_012104355.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_012104355.1;transl_table=11 NC_009708.1 RefSeq gene 361471 361749 . + . ID=gene331;Name=YPSIP31758_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02925 NC_009708.1 Protein Homology CDS 361471 361749 . + 0 ID=cds308;Parent=gene331;Dbxref=Genbank:WP_011193204.1;Name=WP_011193204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193204.1;transl_table=11 NC_009708.1 RefSeq gene 361901 362419 . - . ID=gene332;Name=YPSIP31758_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02930;old_locus_tag=YpsIP31758_0312 NC_009708.1 Protein Homology CDS 361901 362419 . - 0 ID=cds309;Parent=gene332;Dbxref=Genbank:WP_002212097.1;Name=WP_002212097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212097.1;transl_table=11 NC_009708.1 RefSeq gene 362943 363440 . + . ID=gene333;Name=YPSIP31758_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02935;old_locus_tag=YpsIP31758_0313 NC_009708.1 Protein Homology CDS 362943 363440 . + 0 ID=cds310;Parent=gene333;Dbxref=Genbank:WP_002212098.1;Name=WP_002212098.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212098.1;transl_table=11 NC_009708.1 RefSeq gene 363508 364989 . + . ID=gene334;Name=YPSIP31758_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02940;old_locus_tag=YpsIP31758_0314 NC_009708.1 Protein Homology CDS 363508 364989 . + 0 ID=cds311;Parent=gene334;Dbxref=Genbank:WP_002230616.1;Name=WP_002230616.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002230616.1;transl_table=11 NC_009708.1 RefSeq gene 364996 365436 . + . ID=gene335;Name=YPSIP31758_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02945;old_locus_tag=YpsIP31758_0315 NC_009708.1 Protein Homology CDS 364996 365436 . + 0 ID=cds312;Parent=gene335;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11 NC_009708.1 RefSeq gene 365436 367256 . + . ID=gene336;Name=YPSIP31758_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02950;old_locus_tag=YpsIP31758_0316 NC_009708.1 Protein Homology CDS 365436 367256 . + 0 ID=cds313;Parent=gene336;Dbxref=Genbank:WP_011193201.1;Name=WP_011193201.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011193201.1;transl_table=11 NC_009708.1 RefSeq gene 367220 368308 . + . ID=gene337;Name=YPSIP31758_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02955;old_locus_tag=YpsIP31758_0317 NC_009708.1 Protein Homology CDS 367220 368308 . + 0 ID=cds314;Parent=gene337;Dbxref=Genbank:WP_041175720.1;Name=WP_041175720.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_041175720.1;transl_table=11 NC_009708.1 RefSeq gene 368434 369750 . + . ID=gene338;Name=YPSIP31758_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02960;old_locus_tag=YpsIP31758_0318 NC_009708.1 Protein Homology CDS 368434 369750 . + 0 ID=cds315;Parent=gene338;Dbxref=Genbank:WP_011193200.1;Name=WP_011193200.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193200.1;transl_table=11 NC_009708.1 RefSeq gene 369750 370295 . + . ID=gene339;Name=YPSIP31758_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02965;old_locus_tag=YpsIP31758_0319 NC_009708.1 Protein Homology CDS 369750 370295 . + 0 ID=cds316;Parent=gene339;Dbxref=Genbank:WP_012104358.1;Name=WP_012104358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104358.1;transl_table=11 NC_009708.1 RefSeq gene 370298 371644 . + . ID=gene340;Name=YPSIP31758_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02970;old_locus_tag=YpsIP31758_0320 NC_009708.1 Protein Homology CDS 370298 371644 . + 0 ID=cds317;Parent=gene340;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11 NC_009708.1 RefSeq gene 371659 372411 . + . ID=gene341;Name=YPSIP31758_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02975;old_locus_tag=YpsIP31758_0321 NC_009708.1 Protein Homology CDS 371659 372411 . + 0 ID=cds318;Parent=gene341;Dbxref=Genbank:WP_002355154.1;Name=WP_002355154.1;gbkey=CDS;product=chemotaxis protein MotB;protein_id=WP_002355154.1;transl_table=11 NC_009708.1 RefSeq gene 372422 375025 . + . ID=gene342;Name=YPSIP31758_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02980;old_locus_tag=YpsIP31758_0322 NC_009708.1 Protein Homology CDS 372422 375025 . + 0 ID=cds319;Parent=gene342;Dbxref=Genbank:WP_002212107.1;Name=WP_002212107.1;gbkey=CDS;product=ATP-dependent Clp protease ClpV;protein_id=WP_002212107.1;transl_table=11 NC_009708.1 RefSeq gene 375022 375819 . + . ID=gene343;Name=YPSIP31758_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02985;old_locus_tag=YpsIP31758_0323 NC_009708.1 Protein Homology CDS 375022 375819 . + 0 ID=cds320;Parent=gene343;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11 NC_009708.1 RefSeq gene 375816 376502 . + . ID=gene344;Name=YPSIP31758_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02990;old_locus_tag=YpsIP31758_0324 NC_009708.1 Protein Homology CDS 375816 376502 . + 0 ID=cds321;Parent=gene344;Dbxref=Genbank:WP_002212109.1;Name=WP_002212109.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212109.1;transl_table=11 NC_009708.1 RefSeq gene 376508 377896 . + . ID=gene345;Name=YPSIP31758_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS02995;old_locus_tag=YpsIP31758_0325 NC_009708.1 Protein Homology CDS 376508 377896 . + 0 ID=cds322;Parent=gene345;Dbxref=Genbank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212110.1;transl_table=11 NC_009708.1 RefSeq gene 377928 381461 . + . ID=gene346;Name=YPSIP31758_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03000;old_locus_tag=YpsIP31758_0326 NC_009708.1 Protein Homology CDS 377928 381461 . + 0 ID=cds323;Parent=gene346;Dbxref=Genbank:WP_012104359.1;Name=WP_012104359.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_012104359.1;transl_table=11 NC_009708.1 RefSeq gene 381613 382926 . + . ID=gene347;Name=YPSIP31758_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03005;old_locus_tag=YpsIP31758_0327 NC_009708.1 Protein Homology CDS 381613 382926 . + 0 ID=cds324;Parent=gene347;Dbxref=Genbank:WP_011193197.1;Name=WP_011193197.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193197.1;transl_table=11 NC_009708.1 RefSeq repeat_region 382721 383176 . + . ID=id41;gbkey=repeat_region NC_009708.1 RefSeq gene 382948 385170 . + . ID=gene348;Name=YPSIP31758_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03010;old_locus_tag=YpsIP31758_0328 NC_009708.1 Protein Homology CDS 382948 385170 . + 0 ID=cds325;Parent=gene348;Dbxref=Genbank:WP_012104360.1;Name=WP_012104360.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_012104360.1;transl_table=11 NC_009708.1 RefSeq repeat_region 383223 384766 . + . ID=id42;gbkey=repeat_region NC_009708.1 RefSeq gene 385176 385634 . + . ID=gene349;Name=YPSIP31758_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03015;old_locus_tag=YpsIP31758_0329 NC_009708.1 Protein Homology CDS 385176 385634 . + 0 ID=cds326;Parent=gene349;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11 NC_009708.1 RefSeq repeat_region 385459 389472 . + . ID=id43;gbkey=repeat_region NC_009708.1 RefSeq gene 385627 388488 . + . ID=gene350;Name=YPSIP31758_RS03020;end_range=388488,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03020;old_locus_tag=YpsIP31758_0330;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 385627 388488 . + 0 ID=cds327;Parent=gene350;end_range=388488,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 388519 389499 . + . ID=gene351;Name=YPSIP31758_RS22530;end_range=389499,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22530;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 388519 389499 . + 0 ID=cds328;Parent=gene351;end_range=389499,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 389845 390717 . + . ID=gene352;Name=YPSIP31758_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03025;old_locus_tag=YpsIP31758_0331 NC_009708.1 Protein Homology CDS 389845 390717 . + 0 ID=cds329;Parent=gene352;Dbxref=Genbank:WP_012104362.1;Name=WP_012104362.1;gbkey=CDS;product=toxin;protein_id=WP_012104362.1;transl_table=11 NC_009708.1 RefSeq gene 391151 391336 . - . ID=gene353;Name=YPSIP31758_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03030 NC_009708.1 GeneMarkS+ CDS 391151 391336 . - 0 ID=cds330;Parent=gene353;Dbxref=Genbank:WP_041175721.1;Name=WP_041175721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175721.1;transl_table=11 NC_009708.1 RefSeq repeat_region 391167 395180 . + . ID=id44;gbkey=repeat_region NC_009708.1 RefSeq gene 391335 394196 . + . ID=gene354;Name=YPSIP31758_RS03035;end_range=394196,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03035;old_locus_tag=YpsIP31758_0333;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 391335 394196 . + 0 ID=cds331;Parent=gene354;end_range=394196,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 395591 396100 . + . ID=gene355;Name=YPSIP31758_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03040;old_locus_tag=YpsIP31758_0334 NC_009708.1 Protein Homology CDS 395591 396100 . + 0 ID=cds332;Parent=gene355;Dbxref=Genbank:WP_012104365.1;Name=WP_012104365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104365.1;transl_table=11 NC_009708.1 RefSeq gene 396154 396297 . - . ID=gene356;Name=YPSIP31758_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03045 NC_009708.1 Protein Homology CDS 396154 396297 . - 0 ID=cds333;Parent=gene356;Dbxref=Genbank:WP_041175821.1;Name=WP_041175821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175821.1;transl_table=11 NC_009708.1 RefSeq repeat_region 396284 396403 . + . ID=id45;gbkey=repeat_region NC_009708.1 RefSeq gene 396504 396728 . - . ID=gene357;Name=YPSIP31758_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03050;old_locus_tag=YpsIP31758_0336 NC_009708.1 Protein Homology CDS 396504 396728 . - 0 ID=cds334;Parent=gene357;Dbxref=Genbank:WP_002213866.1;Name=WP_002213866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213866.1;transl_table=11 NC_009708.1 RefSeq gene 396810 397217 . - . ID=gene358;Name=YPSIP31758_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03055;old_locus_tag=YpsIP31758_0337 NC_009708.1 Protein Homology CDS 396810 397217 . - 0 ID=cds335;Parent=gene358;Dbxref=Genbank:WP_012104367.1;Name=WP_012104367.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_012104367.1;transl_table=11 NC_009708.1 RefSeq repeat_region 397351 397806 . + . ID=id46;gbkey=repeat_region NC_009708.1 RefSeq gene 397578 399776 . + . ID=gene359;Name=YPSIP31758_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03065;old_locus_tag=YpsIP31758_0339 NC_009708.1 Protein Homology CDS 397578 399776 . + 0 ID=cds336;Parent=gene359;Dbxref=Genbank:WP_012104368.1;Name=WP_012104368.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_012104368.1;transl_table=11 NC_009708.1 RefSeq repeat_region 397853 399396 . + . ID=id47;gbkey=repeat_region NC_009708.1 RefSeq gene 399779 400201 . + . ID=gene360;Name=YPSIP31758_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03070;old_locus_tag=YpsIP31758_0340 NC_009708.1 Protein Homology CDS 399779 400201 . + 0 ID=cds337;Parent=gene360;Dbxref=Genbank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213861.1;transl_table=11 NC_009708.1 RefSeq gene 400246 404412 . + . ID=gene361;Name=YPSIP31758_RS03075;end_range=404412,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03075;old_locus_tag=YpsIP31758_0341;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 400246 404412 . + 0 ID=cds338;Parent=gene361;end_range=404412,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 404826 405155 . + . ID=gene362;Name=YPSIP31758_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03080 NC_009708.1 Protein Homology CDS 404826 405155 . + 0 ID=cds339;Parent=gene362;Dbxref=Genbank:WP_032466790.1;Name=WP_032466790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466790.1;transl_table=11 NC_009708.1 RefSeq repeat_region 405371 405561 . + . ID=id48;gbkey=repeat_region NC_009708.1 RefSeq gene 405383 405616 . + . ID=gene363;Name=YPSIP31758_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03085 NC_009708.1 Protein Homology CDS 405383 405616 . + 0 ID=cds340;Parent=gene363;Dbxref=Genbank:WP_041175823.1;Name=WP_041175823.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_041175823.1;transl_table=11 NC_009708.1 RefSeq repeat_region 405666 405785 . + . ID=id49;gbkey=repeat_region NC_009708.1 RefSeq gene 405893 406792 . - . ID=gene364;Name=YPSIP31758_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03090;old_locus_tag=YpsIP31758_0344 NC_009708.1 Protein Homology CDS 405893 406792 . - 0 ID=cds341;Parent=gene364;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11 NC_009708.1 RefSeq gene 406789 407919 . - . ID=gene365;Name=YPSIP31758_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03095;old_locus_tag=YpsIP31758_0345 NC_009708.1 Protein Homology CDS 406789 407919 . - 0 ID=cds342;Parent=gene365;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11 NC_009708.1 RefSeq gene 408189 409055 . + . ID=gene366;Name=YPSIP31758_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03100;old_locus_tag=YpsIP31758_0347 NC_009708.1 Protein Homology CDS 408189 409055 . + 0 ID=cds343;Parent=gene366;Dbxref=Genbank:WP_012104371.1;Name=WP_012104371.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_012104371.1;transl_table=11 NC_009708.1 RefSeq gene 409216 409719 . - . ID=gene367;Name=YPSIP31758_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03105;old_locus_tag=YpsIP31758_0348 NC_009708.1 Protein Homology CDS 409216 409719 . - 0 ID=cds344;Parent=gene367;Dbxref=Genbank:WP_012104372.1;Name=WP_012104372.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_012104372.1;transl_table=11 NC_009708.1 RefSeq gene 409725 410654 . - . ID=gene368;Name=YPSIP31758_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03110;old_locus_tag=YpsIP31758_0349 NC_009708.1 Protein Homology CDS 409725 410654 . - 0 ID=cds345;Parent=gene368;Dbxref=Genbank:WP_012104373.1;Name=WP_012104373.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_012104373.1;transl_table=11 NC_009708.1 RefSeq gene 410859 411560 . - . ID=gene369;Name=YPSIP31758_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03115;old_locus_tag=YpsIP31758_0350 NC_009708.1 Protein Homology CDS 410859 411560 . - 0 ID=cds346;Parent=gene369;Dbxref=Genbank:WP_011193185.1;Name=WP_011193185.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_011193185.1;transl_table=11 NC_009708.1 RefSeq gene 412033 412614 . + . ID=gene370;Name=YPSIP31758_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03120;old_locus_tag=YpsIP31758_0352 NC_009708.1 Protein Homology CDS 412033 412614 . + 0 ID=cds347;Parent=gene370;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11 NC_009708.1 RefSeq gene 412629 413750 . + . ID=gene371;Name=YPSIP31758_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03125;old_locus_tag=YpsIP31758_0353 NC_009708.1 Protein Homology CDS 412629 413750 . + 0 ID=cds348;Parent=gene371;Dbxref=Genbank:WP_012104376.1;Name=WP_012104376.1;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_012104376.1;transl_table=11 NC_009708.1 RefSeq gene 413769 414917 . + . ID=gene372;Name=YPSIP31758_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03130;old_locus_tag=YpsIP31758_0354 NC_009708.1 Protein Homology CDS 413769 414917 . + 0 ID=cds349;Parent=gene372;Dbxref=Genbank:WP_012104377.1;Name=WP_012104377.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_012104377.1;transl_table=11 NC_009708.1 RefSeq gene 414929 415723 . + . ID=gene373;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03135;old_locus_tag=YpsIP31758_0355 NC_009708.1 Protein Homology CDS 414929 415723 . + 0 ID=cds350;Parent=gene373;Dbxref=Genbank:WP_002213853.1;Name=WP_002213853.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_002213853.1;transl_table=11 NC_009708.1 RefSeq gene 415720 416535 . + . ID=gene374;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03140;old_locus_tag=YpsIP31758_0356 NC_009708.1 Protein Homology CDS 415720 416535 . + 0 ID=cds351;Parent=gene374;Dbxref=Genbank:WP_011193182.1;Name=WP_011193182.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_011193182.1;transl_table=11 NC_009708.1 RefSeq repeat_region 416910 417076 . + . ID=id50;gbkey=repeat_region NC_009708.1 RefSeq gene 417154 417411 . - . ID=gene375;Name=YPSIP31758_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03145;old_locus_tag=YpsIP31758_0357 NC_009708.1 Protein Homology CDS 417154 417411 . - 0 ID=cds352;Parent=gene375;Dbxref=Genbank:WP_012104378.1;Name=WP_012104378.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_012104378.1;transl_table=11 NC_009708.1 RefSeq gene 417811 419166 . + . ID=gene376;Name=YPSIP31758_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03150;old_locus_tag=YpsIP31758_0358 NC_009708.1 Protein Homology CDS 417811 419166 . + 0 ID=cds353;Parent=gene376;Dbxref=Genbank:WP_002210039.1;Name=WP_002210039.1;gbkey=CDS;product=xanthine/uracil permease;protein_id=WP_002210039.1;transl_table=11 NC_009708.1 RefSeq gene 419483 421132 . + . ID=gene377;Name=YPSIP31758_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03155;old_locus_tag=YpsIP31758_0359 NC_009708.1 Protein Homology CDS 419483 421132 . + 0 ID=cds354;Parent=gene377;Dbxref=Genbank:WP_002215816.1;Name=WP_002215816.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002215816.1;transl_table=11 NC_009708.1 RefSeq gene 421350 422537 . - . ID=gene378;Name=YPSIP31758_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03160;old_locus_tag=YpsIP31758_0360 NC_009708.1 Protein Homology CDS 421350 422537 . - 0 ID=cds355;Parent=gene378;Dbxref=Genbank:WP_012104379.1;Name=WP_012104379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104379.1;transl_table=11 NC_009708.1 RefSeq gene 422689 423609 . - . ID=gene379;Name=YPSIP31758_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03165;old_locus_tag=YpsIP31758_0361 NC_009708.1 Protein Homology CDS 422689 423609 . - 0 ID=cds356;Parent=gene379;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11 NC_009708.1 RefSeq gene 424461 425450 . + . ID=gene380;Name=YPSIP31758_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03170;old_locus_tag=YpsIP31758_0364 NC_009708.1 Protein Homology CDS 424461 425450 . + 0 ID=cds357;Parent=gene380;Dbxref=Genbank:WP_012104382.1;Name=WP_012104382.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_012104382.1;transl_table=11 NC_009708.1 RefSeq gene 425654 427150 . + . ID=gene381;Name=YPSIP31758_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03175;old_locus_tag=YpsIP31758_0365 NC_009708.1 Protein Homology CDS 425654 427150 . + 0 ID=cds358;Parent=gene381;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NC_009708.1 RefSeq gene 427143 428132 . + . ID=gene382;Name=YPSIP31758_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03180;old_locus_tag=YpsIP31758_0366 NC_009708.1 Protein Homology CDS 427143 428132 . + 0 ID=cds359;Parent=gene382;Dbxref=Genbank:WP_002210045.1;Name=WP_002210045.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NC_009708.1 RefSeq gene 428134 429087 . + . ID=gene383;Name=YPSIP31758_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03185;old_locus_tag=YpsIP31758_0367 NC_009708.1 Protein Homology CDS 428134 429087 . + 0 ID=cds360;Parent=gene383;Dbxref=Genbank:WP_011193178.1;Name=WP_011193178.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_011193178.1;transl_table=11 NC_009708.1 RefSeq gene 429106 430743 . + . ID=gene384;Name=YPSIP31758_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03190;old_locus_tag=YpsIP31758_0368 NC_009708.1 Protein Homology CDS 429106 430743 . + 0 ID=cds361;Parent=gene384;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11 NC_009708.1 RefSeq gene 430740 431345 . + . ID=gene385;Name=YPSIP31758_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03195;old_locus_tag=YpsIP31758_0369 NC_009708.1 Protein Homology CDS 430740 431345 . + 0 ID=cds362;Parent=gene385;Dbxref=Genbank:WP_011193177.1;Name=WP_011193177.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_011193177.1;transl_table=11 NC_009708.1 RefSeq gene 431552 432403 . - . ID=gene386;Name=YPSIP31758_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03200;old_locus_tag=YpsIP31758_0370 NC_009708.1 Protein Homology CDS 431552 432403 . - 0 ID=cds363;Parent=gene386;Dbxref=Genbank:WP_012104383.1;Name=WP_012104383.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_012104383.1;transl_table=11 NC_009708.1 RefSeq gene 432657 434003 . + . ID=gene387;Name=YPSIP31758_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03205;old_locus_tag=YpsIP31758_0371 NC_009708.1 Protein Homology CDS 432657 434003 . + 0 ID=cds364;Parent=gene387;Dbxref=Genbank:WP_002210050.1;Name=WP_002210050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210050.1;transl_table=11 NC_009708.1 RefSeq gene 434155 435330 . - . ID=gene388;Name=YPSIP31758_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03210;old_locus_tag=YpsIP31758_0372 NC_009708.1 Protein Homology CDS 434155 435330 . - 0 ID=cds365;Parent=gene388;Dbxref=Genbank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_002210051.1;transl_table=11 NC_009708.1 RefSeq repeat_region 435582 435758 . + . ID=id51;gbkey=repeat_region NC_009708.1 cmsearch region 435824 436237 . - . ID=id52;Note=cspA;gbkey=misc_feature NC_009708.1 RefSeq gene 435851 436063 . - . ID=gene389;Name=YPSIP31758_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03215;old_locus_tag=YpsIP31758_0374 NC_009708.1 Protein Homology CDS 435851 436063 . - 0 ID=cds366;Parent=gene389;Dbxref=Genbank:WP_002210052.1;Name=WP_002210052.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210052.1;transl_table=11 NC_009708.1 RefSeq repeat_region 435879 437032 . + . ID=id53;gbkey=repeat_region NC_009708.1 cmsearch region 436286 436709 . - . ID=id54;Note=cspA;gbkey=misc_feature NC_009708.1 RefSeq gene 436323 436535 . - . ID=gene390;Name=YPSIP31758_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03220;old_locus_tag=YpsIP31758_0375 NC_009708.1 Protein Homology CDS 436323 436535 . - 0 ID=cds367;Parent=gene390;Dbxref=Genbank:WP_012104384.1;Name=WP_012104384.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012104384.1;transl_table=11 NC_009708.1 cmsearch region 436758 437187 . - . ID=id55;Note=cspA;gbkey=misc_feature NC_009708.1 RefSeq gene 436795 437007 . - . ID=gene391;Name=YPSIP31758_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03225;old_locus_tag=YpsIP31758_0376 NC_009708.1 Protein Homology CDS 436795 437007 . - 0 ID=cds368;Parent=gene391;Dbxref=Genbank:WP_011193172.1;Name=WP_011193172.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_011193172.1;transl_table=11 NC_009708.1 RefSeq gene 437101 437250 . - . ID=gene392;Name=YPSIP31758_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03230 NC_009708.1 Protein Homology CDS 437101 437250 . - 0 ID=cds369;Parent=gene392;Dbxref=Genbank:WP_041175722.1;Name=WP_041175722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175722.1;transl_table=11 NC_009708.1 RefSeq gene 437542 438009 . - . ID=gene393;Name=YPSIP31758_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03235;old_locus_tag=YpsIP31758_0378 NC_009708.1 Protein Homology CDS 437542 438009 . - 0 ID=cds370;Parent=gene393;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11 NC_009708.1 RefSeq gene 438485 439297 . + . ID=gene394;Name=YPSIP31758_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03240;old_locus_tag=YpsIP31758_0379 NC_009708.1 Protein Homology CDS 438485 439297 . + 0 ID=cds371;Parent=gene394;Dbxref=Genbank:WP_012104386.1;Name=WP_012104386.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_012104386.1;transl_table=11 NC_009708.1 RefSeq gene 439362 440252 . + . ID=gene395;Name=YPSIP31758_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03245;old_locus_tag=YpsIP31758_0380 NC_009708.1 Protein Homology CDS 439362 440252 . + 0 ID=cds372;Parent=gene395;Dbxref=Genbank:WP_011193170.1;Name=WP_011193170.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_011193170.1;transl_table=11 NC_009708.1 RefSeq gene 440444 440839 . + . ID=gene396;Name=YPSIP31758_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03250;old_locus_tag=YpsIP31758_0381 NC_009708.1 Protein Homology CDS 440444 440839 . + 0 ID=cds373;Parent=gene396;Dbxref=Genbank:WP_012104387.1;Name=WP_012104387.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_012104387.1;transl_table=11 NC_009708.1 RefSeq gene 440993 442357 . + . ID=gene397;Name=YPSIP31758_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03255;old_locus_tag=YpsIP31758_0382 NC_009708.1 Protein Homology CDS 440993 442357 . + 0 ID=cds374;Parent=gene397;Dbxref=Genbank:WP_012104388.1;Name=WP_012104388.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012104388.1;transl_table=11 NC_009708.1 RefSeq gene 442447 443121 . + . ID=gene398;Name=YPSIP31758_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03260;old_locus_tag=YpsIP31758_0383 NC_009708.1 Protein Homology CDS 442447 443121 . + 0 ID=cds375;Parent=gene398;Dbxref=Genbank:WP_011193167.1;Name=WP_011193167.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_011193167.1;transl_table=11 NC_009708.1 RefSeq gene 443187 443663 . + . ID=gene399;Name=YPSIP31758_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03265;old_locus_tag=YpsIP31758_0384 NC_009708.1 Protein Homology CDS 443187 443663 . + 0 ID=cds376;Parent=gene399;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11 NC_009708.1 RefSeq repeat_region 443823 444077 . + . ID=id56;gbkey=repeat_region NC_009708.1 RefSeq gene 444441 444737 . - . ID=gene400;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03270;old_locus_tag=YpsIP31758_0385 NC_009708.1 Protein Homology CDS 444441 444737 . - 0 ID=cds377;Parent=gene400;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11 NC_009708.1 RefSeq gene 444762 445727 . - . ID=gene401;Name=YPSIP31758_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03275;old_locus_tag=YpsIP31758_0386 NC_009708.1 Protein Homology CDS 444762 445727 . - 0 ID=cds378;Parent=gene401;Dbxref=Genbank:WP_002210062.1;Name=WP_002210062.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_002210062.1;transl_table=11 NC_009708.1 RefSeq gene 446333 447214 . - . ID=gene402;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03280;old_locus_tag=YpsIP31758_0388 NC_009708.1 Protein Homology CDS 446333 447214 . - 0 ID=cds379;Parent=gene402;Dbxref=Genbank:WP_002220963.1;Name=WP_002220963.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NC_009708.1 RefSeq gene 447290 448744 . - . ID=gene403;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03285;old_locus_tag=YpsIP31758_0389 NC_009708.1 Protein Homology CDS 447290 448744 . - 0 ID=cds380;Parent=gene403;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NC_009708.1 RefSeq gene 448734 448976 . - . ID=gene404;Name=YPSIP31758_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03290;old_locus_tag=YpsIP31758_0390 NC_009708.1 Protein Homology CDS 448734 448976 . - 0 ID=cds381;Parent=gene404;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11 NC_009708.1 RefSeq repeat_region 448991 449535 . + . ID=id57;gbkey=repeat_region NC_009708.1 RefSeq gene 450583 451932 . - . ID=gene405;Name=YPSIP31758_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03295;old_locus_tag=YpsIP31758_0391 NC_009708.1 Protein Homology CDS 450583 451932 . - 0 ID=cds382;Parent=gene405;Dbxref=Genbank:WP_012104390.1;Name=WP_012104390.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_012104390.1;transl_table=11 NC_009708.1 RefSeq gene 451944 452408 . - . ID=gene406;Name=YPSIP31758_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03300;old_locus_tag=YpsIP31758_0392 NC_009708.1 Protein Homology CDS 451944 452408 . - 0 ID=cds383;Parent=gene406;Dbxref=Genbank:WP_012104391.1;Name=WP_012104391.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_012104391.1;transl_table=11 NC_009708.1 RefSeq gene 452566 453018 . - . ID=gene407;Name=YPSIP31758_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03305;old_locus_tag=YpsIP31758_0393 NC_009708.1 Protein Homology CDS 452566 453018 . - 0 ID=cds384;Parent=gene407;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NC_009708.1 RefSeq gene 453289 453900 . - . ID=gene408;Name=YPSIP31758_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03310;old_locus_tag=YpsIP31758_0394 NC_009708.1 Protein Homology CDS 453289 453900 . - 0 ID=cds385;Parent=gene408;Dbxref=Genbank:WP_012104392.1;Name=WP_012104392.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_012104392.1;transl_table=11 NC_009708.1 RefSeq gene 453900 455000 . - . ID=gene409;Name=YPSIP31758_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03315;old_locus_tag=YpsIP31758_0395 NC_009708.1 Protein Homology CDS 453900 455000 . - 0 ID=cds386;Parent=gene409;Dbxref=Genbank:WP_012104393.1;Name=WP_012104393.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=TMAO/DMSO reductase;protein_id=WP_012104393.1;transl_table=11 NC_009708.1 RefSeq gene 455223 456200 . - . ID=gene410;Name=YPSIP31758_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03320;old_locus_tag=YpsIP31758_0396 NC_009708.1 Protein Homology CDS 455223 456200 . - 0 ID=cds387;Parent=gene410;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11 NC_009708.1 RefSeq gene 456601 458517 . + . ID=gene411;Name=YPSIP31758_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03325;old_locus_tag=YpsIP31758_0397 NC_009708.1 Protein Homology CDS 456601 458517 . + 0 ID=cds388;Parent=gene411;Dbxref=Genbank:WP_012104394.1;Name=WP_012104394.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104394.1;transl_table=11 NC_009708.1 RefSeq gene 458854 459897 . + . ID=gene412;Name=YPSIP31758_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03330;old_locus_tag=YpsIP31758_0398 NC_009708.1 Protein Homology CDS 458854 459897 . + 0 ID=cds389;Parent=gene412;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NC_009708.1 RefSeq gene 460101 461096 . + . ID=gene413;Name=YPSIP31758_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03335;old_locus_tag=YpsIP31758_0399 NC_009708.1 Protein Homology CDS 460101 461096 . + 0 ID=cds390;Parent=gene413;Dbxref=Genbank:WP_002210076.1;Name=WP_002210076.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NC_009708.1 RefSeq gene 461093 461581 . + . ID=gene414;Name=YPSIP31758_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03340;old_locus_tag=YpsIP31758_0400 NC_009708.1 Protein Homology CDS 461093 461581 . + 0 ID=cds391;Parent=gene414;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NC_009708.1 RefSeq gene 461595 462188 . + . ID=gene415;Name=YPSIP31758_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03345;old_locus_tag=YpsIP31758_0401 NC_009708.1 Protein Homology CDS 461595 462188 . + 0 ID=cds392;Parent=gene415;Dbxref=Genbank:WP_002210078.1;Name=WP_002210078.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210078.1;transl_table=11 NC_009708.1 RefSeq gene 462178 463647 . + . ID=gene416;Name=YPSIP31758_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03350;old_locus_tag=YpsIP31758_0402 NC_009708.1 Protein Homology CDS 462178 463647 . + 0 ID=cds393;Parent=gene416;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NC_009708.1 RefSeq gene 463762 467658 . + . ID=gene417;Name=YPSIP31758_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03355;old_locus_tag=YpsIP31758_0403 NC_009708.1 Protein Homology CDS 463762 467658 . + 0 ID=cds394;Parent=gene417;Dbxref=Genbank:WP_041175723.1;Name=WP_041175723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175723.1;transl_table=11 NC_009708.1 RefSeq gene 467655 468524 . + . ID=gene418;Name=YPSIP31758_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03360;old_locus_tag=YpsIP31758_0404 NC_009708.1 Protein Homology CDS 467655 468524 . + 0 ID=cds395;Parent=gene418;Dbxref=Genbank:WP_012104396.1;Name=WP_012104396.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_012104396.1;transl_table=11 NC_009708.1 RefSeq gene 468536 469981 . + . ID=gene419;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03365;old_locus_tag=YpsIP31758_0405 NC_009708.1 Protein Homology CDS 468536 469981 . + 0 ID=cds396;Parent=gene419;Dbxref=Genbank:WP_012104397.1;Name=WP_012104397.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_012104397.1;transl_table=11 NC_009708.1 RefSeq gene 470970 473102 . - . ID=gene420;Name=YPSIP31758_RS03370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03370;partial=true;pseudo=true;start_range=.,470970 NC_009708.1 Protein Homology CDS 470970 473102 . - 0 ID=cds397;Parent=gene420;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=toxin;pseudo=true;start_range=.,470970;transl_table=11 NC_009708.1 RefSeq repeat_region 471087 473120 . + . ID=id58;gbkey=repeat_region NC_009708.1 RefSeq gene 474141 476171 . - . ID=gene421;Name=YPSIP31758_RS03375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03375;partial=true;pseudo=true;start_range=.,474141 NC_009708.1 Protein Homology CDS 474141 476171 . - 0 ID=cds398;Parent=gene421;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=toxin;pseudo=true;start_range=.,474141;transl_table=11 NC_009708.1 RefSeq repeat_region 474193 476140 . + . ID=id59;gbkey=repeat_region NC_009708.1 RefSeq gene 476928 478931 . - . ID=gene422;Name=YPSIP31758_RS03380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03380;partial=true;pseudo=true;start_range=.,476928 NC_009708.1 Protein Homology CDS 476928 478931 . - 0 ID=cds399;Parent=gene422;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=toxin;pseudo=true;start_range=.,476928;transl_table=11 NC_009708.1 RefSeq repeat_region 476929 478949 . + . ID=id60;gbkey=repeat_region NC_009708.1 RefSeq gene 478956 481832 . - . ID=gene423;Name=YPSIP31758_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03385;old_locus_tag=YpsIP31758_0409 NC_009708.1 Protein Homology CDS 478956 481832 . - 0 ID=cds400;Parent=gene423;Dbxref=Genbank:WP_012104401.1;Name=WP_012104401.1;gbkey=CDS;product=toxin;protein_id=WP_012104401.1;transl_table=11 NC_009708.1 RefSeq repeat_region 479817 481696 . + . ID=id61;gbkey=repeat_region NC_009708.1 RefSeq gene 482047 482406 . - . ID=gene424;Name=YPSIP31758_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03390;old_locus_tag=YpsIP31758_0411 NC_009708.1 Protein Homology CDS 482047 482406 . - 0 ID=cds401;Parent=gene424;Dbxref=Genbank:WP_012104402.1;Name=WP_012104402.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104402.1;transl_table=11 NC_009708.1 RefSeq gene 482403 482804 . - . ID=gene425;Name=YPSIP31758_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03395;old_locus_tag=YpsIP31758_0412 NC_009708.1 Protein Homology CDS 482403 482804 . - 0 ID=cds402;Parent=gene425;Dbxref=Genbank:WP_012104403.1;Name=WP_012104403.1;gbkey=CDS;product=peptidase M15;protein_id=WP_012104403.1;transl_table=11 NC_009708.1 RefSeq gene 482817 483119 . - . ID=gene426;Name=YPSIP31758_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03400;old_locus_tag=YpsIP31758_0413 NC_009708.1 Protein Homology CDS 482817 483119 . - 0 ID=cds403;Parent=gene426;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11 NC_009708.1 RefSeq gene 483253 487770 . - . ID=gene427;Name=YPSIP31758_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03405;old_locus_tag=YpsIP31758_0414 NC_009708.1 Protein Homology CDS 483253 487770 . - 0 ID=cds404;Parent=gene427;Dbxref=Genbank:WP_012104404.1;Name=WP_012104404.1;gbkey=CDS;product=toxin;protein_id=WP_012104404.1;transl_table=11 NC_009708.1 RefSeq gene 487828 491421 . - . ID=gene428;Name=YPSIP31758_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03410;old_locus_tag=YpsIP31758_0415 NC_009708.1 Protein Homology CDS 487828 491421 . - 0 ID=cds405;Parent=gene428;Dbxref=Genbank:WP_012104405.1;Name=WP_012104405.1;gbkey=CDS;product=toxin;protein_id=WP_012104405.1;transl_table=11 NC_009708.1 RefSeq gene 491461 494124 . - . ID=gene429;Name=YPSIP31758_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03415;old_locus_tag=YpsIP31758_0416 NC_009708.1 Protein Homology CDS 491461 494124 . - 0 ID=cds406;Parent=gene429;Dbxref=Genbank:WP_012104406.1;Name=WP_012104406.1;gbkey=CDS;product=toxin;protein_id=WP_012104406.1;transl_table=11 NC_009708.1 RefSeq gene 494332 495219 . - . ID=gene430;Name=YPSIP31758_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03420;old_locus_tag=YpsIP31758_0417 NC_009708.1 Protein Homology CDS 494332 495219 . - 0 ID=cds407;Parent=gene430;Dbxref=Genbank:WP_012104408.1;Name=WP_012104408.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012104408.1;transl_table=11 NC_009708.1 RefSeq gene 495481 496392 . - . ID=gene431;Name=YPSIP31758_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03425;old_locus_tag=YpsIP31758_0418 NC_009708.1 Protein Homology CDS 495481 496392 . - 0 ID=cds408;Parent=gene431;Dbxref=Genbank:WP_012104409.1;Name=WP_012104409.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104409.1;transl_table=11 NC_009708.1 RefSeq gene 496695 496898 . + . ID=gene432;Name=YPSIP31758_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03430;old_locus_tag=YpsIP31758_0419 NC_009708.1 Protein Homology CDS 496695 496898 . + 0 ID=cds409;Parent=gene432;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11 NC_009708.1 RefSeq gene 496906 497841 . + . ID=gene433;Name=YPSIP31758_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03435;old_locus_tag=YpsIP31758_0420 NC_009708.1 Protein Homology CDS 496906 497841 . + 0 ID=cds410;Parent=gene433;Dbxref=Genbank:WP_012104410.1;Name=WP_012104410.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_012104410.1;transl_table=11 NC_009708.1 RefSeq gene 497843 499798 . + . ID=gene434;Name=YPSIP31758_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03440;old_locus_tag=YpsIP31758_0421 NC_009708.1 Protein Homology CDS 497843 499798 . + 0 ID=cds411;Parent=gene434;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NC_009708.1 RefSeq gene 500065 501534 . + . ID=gene435;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03445;old_locus_tag=YpsIP31758_0422 NC_009708.1 Protein Homology CDS 500065 501534 . + 0 ID=cds412;Parent=gene435;Dbxref=Genbank:WP_011193154.1;Name=WP_011193154.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_011193154.1;transl_table=11 NC_009708.1 RefSeq gene 501729 502202 . + . ID=gene436;Name=YPSIP31758_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03450;old_locus_tag=YpsIP31758_0423 NC_009708.1 Protein Homology CDS 501729 502202 . + 0 ID=cds413;Parent=gene436;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11 NC_009708.1 RefSeq gene 502207 502488 . + . ID=gene437;Name=YPSIP31758_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03455;old_locus_tag=YpsIP31758_0424 NC_009708.1 Protein Homology CDS 502207 502488 . + 0 ID=cds414;Parent=gene437;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11 NC_009708.1 RefSeq gene 502584 503132 . - . ID=gene438;Name=YPSIP31758_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03460;old_locus_tag=YpsIP31758_0425 NC_009708.1 Protein Homology CDS 502584 503132 . - 0 ID=cds415;Parent=gene438;Dbxref=Genbank:WP_011193153.1;Name=WP_011193153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193153.1;transl_table=11 NC_009708.1 RefSeq gene 503311 504651 . + . ID=gene439;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YPSIP31758_RS03465;old_locus_tag=YpsIP31758_0426 NC_009708.1 Protein Homology CDS 503311 504651 . + 0 ID=cds416;Parent=gene439;Dbxref=Genbank:WP_011193152.1;Name=WP_011193152.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_011193152.1;transl_table=11 NC_009708.1 RefSeq gene 504775 505419 . + . ID=gene440;Name=YPSIP31758_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03470;old_locus_tag=YpsIP31758_0427 NC_009708.1 Protein Homology CDS 504775 505419 . + 0 ID=cds417;Parent=gene440;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NC_009708.1 RefSeq gene 505627 506013 . + . ID=gene441;Name=YPSIP31758_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03475;old_locus_tag=YpsIP31758_0428 NC_009708.1 Protein Homology CDS 505627 506013 . + 0 ID=cds418;Parent=gene441;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11 NC_009708.1 RefSeq gene 506237 506647 . - . ID=gene442;Name=YPSIP31758_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03480;old_locus_tag=YpsIP31758_0429 NC_009708.1 Protein Homology CDS 506237 506647 . - 0 ID=cds419;Parent=gene442;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NC_009708.1 RefSeq gene 507000 508667 . - . ID=gene443;Name=YPSIP31758_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03485;old_locus_tag=YpsIP31758_0430 NC_009708.1 Protein Homology CDS 507000 508667 . - 0 ID=cds420;Parent=gene443;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11 NC_009708.1 RefSeq gene 508778 510193 . - . ID=gene444;Name=YPSIP31758_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03490;old_locus_tag=YpsIP31758_0431 NC_009708.1 Protein Homology CDS 508778 510193 . - 0 ID=cds421;Parent=gene444;Dbxref=Genbank:WP_012104411.1;Name=WP_012104411.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_012104411.1;transl_table=11 NC_009708.1 RefSeq gene 510604 511557 . - . ID=gene445;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03495;old_locus_tag=YpsIP31758_0432 NC_009708.1 Protein Homology CDS 510604 511557 . - 0 ID=cds422;Parent=gene445;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11 NC_009708.1 RefSeq gene 511791 512267 . - . ID=gene446;Name=YPSIP31758_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03500;old_locus_tag=YpsIP31758_0433 NC_009708.1 Protein Homology CDS 511791 512267 . - 0 ID=cds423;Parent=gene446;Dbxref=Genbank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210107.1;transl_table=11 NC_009708.1 RefSeq gene 512566 512952 . - . ID=gene447;Name=YPSIP31758_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03505;old_locus_tag=YpsIP31758_0434 NC_009708.1 Protein Homology CDS 512566 512952 . - 0 ID=cds424;Parent=gene447;Dbxref=Genbank:WP_011193150.1;Name=WP_011193150.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_011193150.1;transl_table=11 NC_009708.1 RefSeq gene 513090 513554 . - . ID=gene448;Name=YPSIP31758_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03510;old_locus_tag=YpsIP31758_0435 NC_009708.1 Protein Homology CDS 513090 513554 . - 0 ID=cds425;Parent=gene448;Dbxref=Genbank:WP_012104412.1;Name=WP_012104412.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_012104412.1;transl_table=11 NC_009708.1 RefSeq gene 513566 514501 . - . ID=gene449;Name=YPSIP31758_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03515;old_locus_tag=YpsIP31758_0436 NC_009708.1 Protein Homology CDS 513566 514501 . - 0 ID=cds426;Parent=gene449;Dbxref=Genbank:WP_012104413.1;Name=WP_012104413.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_012104413.1;transl_table=11 NC_009708.1 RefSeq gene 514839 515111 . - . ID=gene450;Name=YPSIP31758_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03520;old_locus_tag=YpsIP31758_0437 NC_009708.1 Protein Homology CDS 514839 515111 . - 0 ID=cds427;Parent=gene450;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11 NC_009708.1 RefSeq gene 515108 515962 . - . ID=gene451;Name=YPSIP31758_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03525;old_locus_tag=YpsIP31758_0438 NC_009708.1 Protein Homology CDS 515108 515962 . - 0 ID=cds428;Parent=gene451;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11 NC_009708.1 RefSeq gene 516268 516750 . - . ID=gene452;Name=YPSIP31758_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03530;old_locus_tag=YpsIP31758_0439 NC_009708.1 Protein Homology CDS 516268 516750 . - 0 ID=cds429;Parent=gene452;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11 NC_009708.1 RefSeq gene 516868 517155 . - . ID=gene453;Name=YPSIP31758_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03535;old_locus_tag=YpsIP31758_0440 NC_009708.1 Protein Homology CDS 516868 517155 . - 0 ID=cds430;Parent=gene453;Dbxref=Genbank:WP_004392031.1;Name=WP_004392031.1;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=ribosome hibernation promoting factor HPF;protein_id=WP_004392031.1;transl_table=11 NC_009708.1 RefSeq gene 517179 518612 . - . ID=gene454;Name=YPSIP31758_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03540;old_locus_tag=YpsIP31758_0441 NC_009708.1 Protein Homology CDS 517179 518612 . - 0 ID=cds431;Parent=gene454;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11 NC_009708.1 RefSeq gene 518674 519399 . - . ID=gene455;Name=YPSIP31758_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03545;old_locus_tag=YpsIP31758_0442 NC_009708.1 Protein Homology CDS 518674 519399 . - 0 ID=cds432;Parent=gene455;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NC_009708.1 RefSeq gene 519406 519951 . - . ID=gene456;Name=YPSIP31758_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03550;old_locus_tag=YpsIP31758_0443 NC_009708.1 Protein Homology CDS 519406 519951 . - 0 ID=cds433;Parent=gene456;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11 NC_009708.1 RefSeq gene 519935 520498 . - . ID=gene457;Name=YPSIP31758_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03555;old_locus_tag=YpsIP31758_0444 NC_009708.1 Protein Homology CDS 519935 520498 . - 0 ID=cds434;Parent=gene457;Dbxref=Genbank:WP_011193147.1;Name=WP_011193147.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011193147.1;transl_table=11 NC_009708.1 RefSeq gene 520495 521058 . - . ID=gene458;Name=YPSIP31758_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03560;old_locus_tag=YpsIP31758_0445 NC_009708.1 Protein Homology CDS 520495 521058 . - 0 ID=cds435;Parent=gene458;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NC_009708.1 RefSeq repeat_region 521096 521222 . + . ID=id62;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 521236 521362 . + . ID=id63;gbkey=repeat_region NC_009708.1 RefSeq gene 521468 522454 . - . ID=gene459;Name=YPSIP31758_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03565;old_locus_tag=YpsIP31758_0446 NC_009708.1 Protein Homology CDS 521468 522454 . - 0 ID=cds436;Parent=gene459;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NC_009708.1 RefSeq gene 522565 523539 . - . ID=gene460;Name=YPSIP31758_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03570;old_locus_tag=YpsIP31758_0447 NC_009708.1 Protein Homology CDS 522565 523539 . - 0 ID=cds437;Parent=gene460;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11 NC_009708.1 RefSeq gene 523804 524622 . + . ID=gene461;Name=YPSIP31758_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03575;old_locus_tag=YpsIP31758_0448 NC_009708.1 Protein Homology CDS 523804 524622 . + 0 ID=cds438;Parent=gene461;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11 NC_009708.1 RefSeq gene 524840 525622 . + . ID=gene462;Name=YPSIP31758_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03580;old_locus_tag=YpsIP31758_0449 NC_009708.1 Protein Homology CDS 524840 525622 . + 0 ID=cds439;Parent=gene462;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11 NC_009708.1 RefSeq gene 525627 526184 . + . ID=gene463;Name=YPSIP31758_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03585;old_locus_tag=YpsIP31758_0450 NC_009708.1 Protein Homology CDS 525627 526184 . + 0 ID=cds440;Parent=gene463;Dbxref=Genbank:WP_011193146.1;Name=WP_011193146.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_011193146.1;transl_table=11 NC_009708.1 RefSeq gene 526197 526820 . + . ID=gene464;Name=YPSIP31758_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03590;old_locus_tag=YpsIP31758_0451 NC_009708.1 Protein Homology CDS 526197 526820 . + 0 ID=cds441;Parent=gene464;Dbxref=Genbank:WP_002210124.1;Name=WP_002210124.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter substrate-binding protein;protein_id=WP_002210124.1;transl_table=11 NC_009708.1 RefSeq gene 526856 527158 . + . ID=gene465;Name=YPSIP31758_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03595;old_locus_tag=YpsIP31758_0452 NC_009708.1 Protein Homology CDS 526856 527158 . + 0 ID=cds442;Parent=gene465;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11 NC_009708.1 RefSeq gene 527305 527559 . + . ID=gene466;Name=YPSIP31758_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03600;old_locus_tag=YpsIP31758_0453 NC_009708.1 Protein Homology CDS 527305 527559 . + 0 ID=cds443;Parent=gene466;Dbxref=Genbank:WP_012104414.1;Name=WP_012104414.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104414.1;transl_table=11 NC_009708.1 RefSeq gene 527713 528975 . + . ID=gene467;Name=YPSIP31758_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03605;old_locus_tag=YpsIP31758_0454 NC_009708.1 Protein Homology CDS 527713 528975 . + 0 ID=cds444;Parent=gene467;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NC_009708.1 RefSeq gene 529156 530244 . - . ID=gene468;Name=YPSIP31758_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03610;old_locus_tag=YpsIP31758_0455 NC_009708.1 Protein Homology CDS 529156 530244 . - 0 ID=cds445;Parent=gene468;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11 NC_009708.1 RefSeq gene 530334 531707 . - . ID=gene469;Name=YPSIP31758_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03615;old_locus_tag=YpsIP31758_0456 NC_009708.1 Protein Homology CDS 530334 531707 . - 0 ID=cds446;Parent=gene469;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11 NC_009708.1 RefSeq gene 531978 532382 . - . ID=gene470;Name=YPSIP31758_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03620;old_locus_tag=YpsIP31758_0457 NC_009708.1 Protein Homology CDS 531978 532382 . - 0 ID=cds447;Parent=gene470;Dbxref=Genbank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210130.1;transl_table=11 NC_009708.1 RefSeq gene 532606 533733 . + . ID=gene471;Name=YPSIP31758_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03625;old_locus_tag=YpsIP31758_0458 NC_009708.1 Protein Homology CDS 532606 533733 . + 0 ID=cds448;Parent=gene471;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11 NC_009708.1 RefSeq gene 534047 534475 . + . ID=gene472;Name=YPSIP31758_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03630;old_locus_tag=YpsIP31758_0459 NC_009708.1 Protein Homology CDS 534047 534475 . + 0 ID=cds449;Parent=gene472;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NC_009708.1 RefSeq gene 534490 534882 . + . ID=gene473;Name=YPSIP31758_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03635;old_locus_tag=YpsIP31758_0461 NC_009708.1 Protein Homology CDS 534490 534882 . + 0 ID=cds450;Parent=gene473;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NC_009708.1 RefSeq gene 534879 535076 . - . ID=gene474;Name=YPSIP31758_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03640;old_locus_tag=YpsIP31758_0460 NC_009708.1 Protein Homology CDS 534879 535076 . - 0 ID=cds451;Parent=gene474;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NC_009708.1 RefSeq gene 535256 535897 . + . ID=gene475;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03645;old_locus_tag=YpsIP31758_0462 NC_009708.1 Protein Homology CDS 535256 535897 . + 0 ID=cds452;Parent=gene475;Dbxref=Genbank:WP_012104415.1;Name=WP_012104415.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_012104415.1;transl_table=11 NC_009708.1 RefSeq gene 535903 536418 . + . ID=gene476;Name=YPSIP31758_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03650;old_locus_tag=YpsIP31758_0463 NC_009708.1 Protein Homology CDS 535903 536418 . + 0 ID=cds453;Parent=gene476;Dbxref=Genbank:WP_012104417.1;Name=WP_012104417.1;gbkey=CDS;product=peptidase;protein_id=WP_012104417.1;transl_table=11 NC_009708.1 RefSeq gene 536571 537056 . - . ID=gene477;Name=YPSIP31758_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03655;old_locus_tag=YpsIP31758_0464 NC_009708.1 Protein Homology CDS 536571 537056 . - 0 ID=cds454;Parent=gene477;Dbxref=Genbank:WP_011193144.1;Name=WP_011193144.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193144.1;transl_table=11 NC_009708.1 RefSeq repeat_region 537426 537595 . + . ID=id64;gbkey=repeat_region NC_009708.1 RefSeq gene 537656 539074 . - . ID=gene478;Name=YPSIP31758_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03660;old_locus_tag=YpsIP31758_0465 NC_009708.1 Protein Homology CDS 537656 539074 . - 0 ID=cds455;Parent=gene478;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11 NC_009708.1 RefSeq gene 539084 543541 . - . ID=gene479;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03665;old_locus_tag=YpsIP31758_0466 NC_009708.1 Protein Homology CDS 539084 543541 . - 0 ID=cds456;Parent=gene479;Dbxref=Genbank:WP_012104419.1;Name=WP_012104419.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_012104419.1;transl_table=11 NC_009708.1 RefSeq gene 544363 545286 . + . ID=gene480;Name=YPSIP31758_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03670;old_locus_tag=YpsIP31758_0468 NC_009708.1 Protein Homology CDS 544363 545286 . + 0 ID=cds457;Parent=gene480;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11 NC_009708.1 RefSeq gene 545321 545539 . + . ID=gene481;Name=YPSIP31758_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03675 NC_009708.1 Protein Homology CDS 545321 545539 . + 0 ID=cds458;Parent=gene481;Dbxref=Genbank:WP_012303491.1;Name=WP_012303491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303491.1;transl_table=11 NC_009708.1 RefSeq gene 545570 547906 . + . ID=gene482;Name=YPSIP31758_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03680;old_locus_tag=YpsIP31758_0469 NC_009708.1 Protein Homology CDS 545570 547906 . + 0 ID=cds459;Parent=gene482;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11 NC_009708.1 RefSeq gene 547912 548024 . - . ID=gene483;Name=YPSIP31758_RS22405;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22405 NC_009708.1 RefSeq transcript 547912 548024 . - . ID=rna23;Parent=gene483;gbkey=misc_RNA;product=SraH RNA NC_009708.1 RefSeq exon 547912 548024 . - . ID=id65;Parent=rna23;gbkey=misc_RNA;product=SraH RNA NC_009708.1 RefSeq gene 547924 548118 . + . ID=gene484;Name=YPSIP31758_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03685 NC_009708.1 Protein Homology CDS 547924 548118 . + 0 ID=cds460;Parent=gene484;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11 NC_009708.1 RefSeq gene 548148 548801 . + . ID=gene485;Name=YPSIP31758_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03690;old_locus_tag=YpsIP31758_0470 NC_009708.1 Protein Homology CDS 548148 548801 . + 0 ID=cds461;Parent=gene485;Dbxref=Genbank:WP_012104420.1;Name=WP_012104420.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_012104420.1;transl_table=11 NC_009708.1 RefSeq gene 548798 549523 . + . ID=gene486;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03695;old_locus_tag=YpsIP31758_0471 NC_009708.1 Protein Homology CDS 548798 549523 . + 0 ID=cds462;Parent=gene486;Dbxref=Genbank:WP_012104421.1;Name=WP_012104421.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_012104421.1;transl_table=11 NC_009708.1 RefSeq gene 549730 550305 . - . ID=gene487;Name=YPSIP31758_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03700;old_locus_tag=YpsIP31758_0472 NC_009708.1 Protein Homology CDS 549730 550305 . - 0 ID=cds463;Parent=gene487;Dbxref=Genbank:WP_012104422.1;Name=WP_012104422.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104422.1;transl_table=11 NC_009708.1 RefSeq gene 550316 550906 . - . ID=gene488;Name=YPSIP31758_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03705;old_locus_tag=YpsIP31758_0473 NC_009708.1 Protein Homology CDS 550316 550906 . - 0 ID=cds464;Parent=gene488;Dbxref=Genbank:WP_011193139.1;Name=WP_011193139.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_011193139.1;transl_table=11 NC_009708.1 RefSeq gene 551177 551530 . - . ID=gene489;Name=YPSIP31758_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03710;old_locus_tag=YpsIP31758_0474 NC_009708.1 Protein Homology CDS 551177 551530 . - 0 ID=cds465;Parent=gene489;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11 NC_009708.1 RefSeq gene 551629 553602 . - . ID=gene490;Name=YPSIP31758_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03715;old_locus_tag=YpsIP31758_0475 NC_009708.1 Protein Homology CDS 551629 553602 . - 0 ID=cds466;Parent=gene490;Dbxref=Genbank:WP_012303495.1;Name=WP_012303495.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_012303495.1;transl_table=11 NC_009708.1 RefSeq gene 553665 554564 . + . ID=gene491;Name=YPSIP31758_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03720;old_locus_tag=YpsIP31758_0476 NC_009708.1 Protein Homology CDS 553665 554564 . + 0 ID=cds467;Parent=gene491;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NC_009708.1 RefSeq gene 554584 554962 . + . ID=gene492;Name=YPSIP31758_RS22630;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=YPSIP31758_RS22630 NC_009708.1 cmsearch ncRNA 554584 554962 . + . ID=rna24;Parent=gene492;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_009708.1 cmsearch exon 554584 554962 . + . ID=id66;Parent=rna24;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_009708.1 RefSeq gene 554644 554946 . + . ID=gene493;Name=YPSIP31758_RS22410;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22410 NC_009708.1 RefSeq transcript 554644 554946 . + . ID=rna25;Parent=gene493;gbkey=misc_RNA;product=RNase P class A NC_009708.1 RefSeq exon 554644 554946 . + . ID=id67;Parent=rna25;gbkey=misc_RNA;product=RNase P class A NC_009708.1 RefSeq gene 555162 555866 . - . ID=gene494;Name=YPSIP31758_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03725;old_locus_tag=YpsIP31758_0477 NC_009708.1 Protein Homology CDS 555162 555866 . - 0 ID=cds468;Parent=gene494;Dbxref=Genbank:WP_011193137.1;Name=WP_011193137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193137.1;transl_table=11 NC_009708.1 RefSeq gene 556128 557021 . + . ID=gene495;Name=YPSIP31758_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03730;old_locus_tag=YpsIP31758_0478 NC_009708.1 Protein Homology CDS 556128 557021 . + 0 ID=cds469;Parent=gene495;Dbxref=Genbank:WP_002210151.1;Name=WP_002210151.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11 NC_009708.1 RefSeq gene 557152 558138 . - . ID=gene496;Name=YPSIP31758_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03735;old_locus_tag=YpsIP31758_0479 NC_009708.1 Protein Homology CDS 557152 558138 . - 0 ID=cds470;Parent=gene496;Dbxref=Genbank:WP_012104424.1;Name=WP_012104424.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104424.1;transl_table=11 NC_009708.1 RefSeq gene 558224 558619 . - . ID=gene497;Name=YPSIP31758_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03740;old_locus_tag=YpsIP31758_0480 NC_009708.1 Protein Homology CDS 558224 558619 . - 0 ID=cds471;Parent=gene497;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11 NC_009708.1 RefSeq gene 558923 559207 . - . ID=gene498;Name=YPSIP31758_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03745;old_locus_tag=YpsIP31758_0481 NC_009708.1 Protein Homology CDS 558923 559207 . - 0 ID=cds472;Parent=gene498;Dbxref=Genbank:WP_011193134.1;Name=WP_011193134.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_011193134.1;transl_table=11 NC_009708.1 RefSeq gene 559204 559599 . - . ID=gene499;Name=YPSIP31758_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03750;old_locus_tag=YpsIP31758_0482 NC_009708.1 Protein Homology CDS 559204 559599 . - 0 ID=cds473;Parent=gene499;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11 NC_009708.1 RefSeq gene 559602 559907 . - . ID=gene500;Name=YPSIP31758_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03755;old_locus_tag=YpsIP31758_0483 NC_009708.1 Protein Homology CDS 559602 559907 . - 0 ID=cds474;Parent=gene500;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11 NC_009708.1 RefSeq gene 559912 560058 . - . ID=gene501;Name=YPSIP31758_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03760;old_locus_tag=YpsIP31758_0484 NC_009708.1 Protein Homology CDS 559912 560058 . - 0 ID=cds475;Parent=gene501;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11 NC_009708.1 RefSeq gene 560062 560442 . - . ID=gene502;Name=YPSIP31758_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03765;old_locus_tag=YpsIP31758_0485 NC_009708.1 Protein Homology CDS 560062 560442 . - 0 ID=cds476;Parent=gene502;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11 NC_009708.1 RefSeq gene 560668 561057 . - . ID=gene503;Name=YPSIP31758_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03770;old_locus_tag=YpsIP31758_0486 NC_009708.1 Protein Homology CDS 560668 561057 . - 0 ID=cds477;Parent=gene503;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11 NC_009708.1 RefSeq gene 561054 561752 . - . ID=gene504;Name=YPSIP31758_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03775;old_locus_tag=YpsIP31758_0487 NC_009708.1 Protein Homology CDS 561054 561752 . - 0 ID=cds478;Parent=gene504;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11 NC_009708.1 RefSeq gene 562030 562563 . - . ID=gene505;Name=YPSIP31758_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03780;old_locus_tag=YpsIP31758_0488 NC_009708.1 Protein Homology CDS 562030 562563 . - 0 ID=cds479;Parent=gene505;Dbxref=Genbank:WP_041175724.1;Name=WP_041175724.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175724.1;transl_table=11 NC_009708.1 RefSeq gene 562812 563606 . - . ID=gene506;Name=YPSIP31758_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03785;old_locus_tag=YpsIP31758_0489 NC_009708.1 Protein Homology CDS 562812 563606 . - 0 ID=cds480;Parent=gene506;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11 NC_009708.1 RefSeq gene 563869 565170 . - . ID=gene507;Name=YPSIP31758_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03790;old_locus_tag=YpsIP31758_0490 NC_009708.1 Protein Homology CDS 563869 565170 . - 0 ID=cds481;Parent=gene507;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11 NC_009708.1 RefSeq gene 565220 565387 . + . ID=gene508;Name=YPSIP31758_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03795 NC_009708.1 Protein Homology CDS 565220 565387 . + 0 ID=cds482;Parent=gene508;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11 NC_009708.1 RefSeq gene 565918 567327 . + . ID=gene509;Name=YPSIP31758_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03800;old_locus_tag=YpsIP31758_0491 NC_009708.1 Protein Homology CDS 565918 567327 . + 0 ID=cds483;Parent=gene509;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11 NC_009708.1 RefSeq gene 567526 568977 . + . ID=gene510;Name=YPSIP31758_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03805;old_locus_tag=YpsIP31758_0492 NC_009708.1 Protein Homology CDS 567526 568977 . + 0 ID=cds484;Parent=gene510;Dbxref=Genbank:WP_012104426.1;Name=WP_012104426.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_012104426.1;transl_table=11 NC_009708.1 RefSeq gene 568988 570478 . + . ID=gene511;Name=YPSIP31758_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03810;old_locus_tag=YpsIP31758_0493 NC_009708.1 Protein Homology CDS 568988 570478 . + 0 ID=cds485;Parent=gene511;Dbxref=Genbank:WP_012104427.1;Name=WP_012104427.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_012104427.1;transl_table=11 NC_009708.1 RefSeq gene 570631 571161 . + . ID=gene512;Name=YPSIP31758_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03815;old_locus_tag=YpsIP31758_0494 NC_009708.1 Protein Homology CDS 570631 571161 . + 0 ID=cds486;Parent=gene512;Dbxref=Genbank:WP_012104428.1;Name=WP_012104428.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104428.1;transl_table=11 NC_009708.1 RefSeq gene 571228 572484 . - . ID=gene513;Name=YPSIP31758_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03820;old_locus_tag=YpsIP31758_0495 NC_009708.1 Protein Homology CDS 571228 572484 . - 0 ID=cds487;Parent=gene513;Dbxref=Genbank:WP_012104429.1;Name=WP_012104429.1;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=WP_012104429.1;transl_table=11 NC_009708.1 RefSeq repeat_region 572692 573408 . + . ID=id68;gbkey=repeat_region NC_009708.1 RefSeq gene 572838 573296 . + . ID=gene514;Name=YPSIP31758_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03825;old_locus_tag=YpsIP31758_0496 NC_009708.1 Protein Homology CDS 572838 573296 . + 0 ID=cds488;Parent=gene514;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 573730 574725 . - . ID=gene515;Name=YPSIP31758_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03830;old_locus_tag=YpsIP31758_0497 NC_009708.1 Protein Homology CDS 573730 574725 . - 0 ID=cds489;Parent=gene515;Dbxref=Genbank:WP_012104430.1;Name=WP_012104430.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_012104430.1;transl_table=11 NC_009708.1 RefSeq gene 574928 575437 . - . ID=gene516;Name=YPSIP31758_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03835;old_locus_tag=YpsIP31758_0498 NC_009708.1 Protein Homology CDS 574928 575437 . - 0 ID=cds490;Parent=gene516;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11 NC_009708.1 RefSeq gene 575710 578553 . - . ID=gene517;Name=YPSIP31758_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03840;old_locus_tag=YpsIP31758_0499 NC_009708.1 Protein Homology CDS 575710 578553 . - 0 ID=cds491;Parent=gene517;Dbxref=Genbank:WP_041175725.1;Name=WP_041175725.1;gbkey=CDS;product=autotransporter;protein_id=WP_041175725.1;transl_table=11 NC_009708.1 RefSeq repeat_region 576872 577212 . + . ID=id69;gbkey=repeat_region NC_009708.1 RefSeq gene 579199 580386 . + . ID=gene518;Name=YPSIP31758_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03845;old_locus_tag=YpsIP31758_0500 NC_009708.1 Protein Homology CDS 579199 580386 . + 0 ID=cds492;Parent=gene518;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11 NC_009708.1 RefSeq gene 580502 582523 . - . ID=gene519;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03850;old_locus_tag=YpsIP31758_0501 NC_009708.1 Protein Homology CDS 580502 582523 . - 0 ID=cds493;Parent=gene519;Dbxref=Genbank:WP_012104432.1;Name=WP_012104432.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_012104432.1;transl_table=11 NC_009708.1 RefSeq gene 582736 583305 . - . ID=gene520;Name=YPSIP31758_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03855;old_locus_tag=YpsIP31758_0502 NC_009708.1 Protein Homology CDS 582736 583305 . - 0 ID=cds494;Parent=gene520;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11 NC_009708.1 RefSeq gene 583401 583634 . + . ID=gene521;Name=YPSIP31758_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03860 NC_009708.1 Protein Homology CDS 583401 583634 . + 0 ID=cds495;Parent=gene521;Dbxref=Genbank:WP_002214938.1;Name=WP_002214938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214938.1;transl_table=11 NC_009708.1 RefSeq gene 583696 585195 . - . ID=gene522;Name=YPSIP31758_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03865;old_locus_tag=YpsIP31758_0503 NC_009708.1 Protein Homology CDS 583696 585195 . - 0 ID=cds496;Parent=gene522;Dbxref=Genbank:WP_012104433.1;Name=WP_012104433.1;gbkey=CDS;product=kinase;protein_id=WP_012104433.1;transl_table=11 NC_009708.1 RefSeq gene 585227 586960 . - . ID=gene523;Name=YPSIP31758_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03870;old_locus_tag=YpsIP31758_0504 NC_009708.1 Protein Homology CDS 585227 586960 . - 0 ID=cds497;Parent=gene523;Dbxref=Genbank:WP_012104434.1;Name=WP_012104434.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104434.1;transl_table=11 NC_009708.1 RefSeq gene 586960 588000 . - . ID=gene524;Name=YPSIP31758_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03875;old_locus_tag=YpsIP31758_0505 NC_009708.1 Protein Homology CDS 586960 588000 . - 0 ID=cds498;Parent=gene524;Dbxref=Genbank:WP_002230582.1;Name=WP_002230582.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230582.1;transl_table=11 NC_009708.1 RefSeq gene 588102 588740 . - . ID=gene525;Name=YPSIP31758_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03880;old_locus_tag=YpsIP31758_0506 NC_009708.1 Protein Homology CDS 588102 588740 . - 0 ID=cds499;Parent=gene525;Dbxref=Genbank:WP_012104435.1;Name=WP_012104435.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_012104435.1;transl_table=11 NC_009708.1 RefSeq gene 588742 589383 . - . ID=gene526;Name=YPSIP31758_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03885;old_locus_tag=YpsIP31758_0507 NC_009708.1 Protein Homology CDS 588742 589383 . - 0 ID=cds500;Parent=gene526;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11 NC_009708.1 RefSeq gene 589416 590054 . - . ID=gene527;Name=YPSIP31758_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03890;old_locus_tag=YpsIP31758_0508 NC_009708.1 Protein Homology CDS 589416 590054 . - 0 ID=cds501;Parent=gene527;Dbxref=Genbank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002210395.1;transl_table=11 NC_009708.1 RefSeq gene 590769 592457 . + . ID=gene528;Name=YPSIP31758_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03895;old_locus_tag=YpsIP31758_0509 NC_009708.1 Protein Homology CDS 590769 592457 . + 0 ID=cds502;Parent=gene528;Dbxref=Genbank:WP_012104436.1;Name=WP_012104436.1;gbkey=CDS;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_012104436.1;transl_table=11 NC_009708.1 RefSeq gene 592502 601786 . + . ID=gene529;Name=YPSIP31758_RS22535;end_range=601786,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22535;old_locus_tag=YpsIP31758_0510;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 592502 601786 . + 0 ID=cds503;Parent=gene529;end_range=601786,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=adhesin;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 598809 601769 . + . ID=id70;gbkey=repeat_region NC_009708.1 RefSeq gene 602554 602907 . + . ID=gene530;Name=YPSIP31758_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03905 NC_009708.1 Protein Homology CDS 602554 602907 . + 0 ID=cds504;Parent=gene530;Dbxref=Genbank:WP_011193122.1;Name=WP_011193122.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193122.1;transl_table=11 NC_009708.1 RefSeq repeat_region 603013 603117 . + . ID=id71;gbkey=repeat_region NC_009708.1 RefSeq gene 603192 603509 . + . ID=gene531;Name=YPSIP31758_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03910;old_locus_tag=YpsIP31758_0512 NC_009708.1 Protein Homology CDS 603192 603509 . + 0 ID=cds505;Parent=gene531;Dbxref=Genbank:WP_011193121.1;Name=WP_011193121.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193121.1;transl_table=11 NC_009708.1 RefSeq gene 603514 603762 . + . ID=gene532;Name=YPSIP31758_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03915;old_locus_tag=YpsIP31758_0513 NC_009708.1 Protein Homology CDS 603514 603762 . + 0 ID=cds506;Parent=gene532;Dbxref=Genbank:WP_012104439.1;Name=WP_012104439.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104439.1;transl_table=11 NC_009708.1 RefSeq repeat_region 603847 606807 . + . ID=id72;gbkey=repeat_region NC_009708.1 RefSeq gene 604455 606875 . + . ID=gene533;Name=YPSIP31758_RS03920;end_range=606875,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03920;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 604455 606875 . + 0 ID=cds507;Parent=gene533;end_range=606875,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=adhesin;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 607589 608065 . + . ID=gene534;Name=YPSIP31758_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03925;old_locus_tag=YpsIP31758_0515 NC_009708.1 Protein Homology CDS 607589 608065 . + 0 ID=cds508;Parent=gene534;Dbxref=Genbank:WP_012104441.1;Name=WP_012104441.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104441.1;transl_table=11 NC_009708.1 RefSeq gene 608410 609021 . + . ID=gene535;Name=YPSIP31758_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22540;old_locus_tag=YpsIP31758_0517 NC_009708.1 Protein Homology CDS 608410 609021 . + 0 ID=cds509;Parent=gene535;Dbxref=Genbank:WP_012104443.1;Name=WP_012104443.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104443.1;transl_table=11 NC_009708.1 RefSeq gene 609028 609333 . + . ID=gene536;Name=YPSIP31758_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03935 NC_009708.1 Protein Homology CDS 609028 609333 . + 0 ID=cds510;Parent=gene536;Dbxref=Genbank:WP_041175726.1;Name=WP_041175726.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175726.1;transl_table=11 NC_009708.1 RefSeq gene 609436 610098 . + . ID=gene537;Name=YPSIP31758_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03940;old_locus_tag=YpsIP31758_0518 NC_009708.1 Protein Homology CDS 609436 610098 . + 0 ID=cds511;Parent=gene537;Dbxref=Genbank:WP_012104444.1;Name=WP_012104444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104444.1;transl_table=11 NC_009708.1 RefSeq gene 610100 610633 . + . ID=gene538;Name=YPSIP31758_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03945 NC_009708.1 Protein Homology CDS 610100 610633 . + 0 ID=cds512;Parent=gene538;Dbxref=Genbank:WP_041175727.1;Name=WP_041175727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175727.1;transl_table=11 NC_009708.1 RefSeq repeat_region 610680 611897 . + . ID=id73;gbkey=repeat_region NC_009708.1 RefSeq gene 610759 611904 . + . ID=gene539;Name=YPSIP31758_RS03950;end_range=611904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03950;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 610759 611904 . + 0 ID=cds513;Parent=gene539;end_range=611904,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 612135 612239 . + . ID=id74;gbkey=repeat_region NC_009708.1 RefSeq gene 612687 613076 . + . ID=gene540;Name=YPSIP31758_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03955;old_locus_tag=YpsIP31758_0520 NC_009708.1 Protein Homology CDS 612687 613076 . + 0 ID=cds514;Parent=gene540;Dbxref=Genbank:WP_011193124.1;Name=WP_011193124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193124.1;transl_table=11 NC_009708.1 RefSeq repeat_region 613289 614543 . + . ID=id75;gbkey=repeat_region NC_009708.1 RefSeq gene 613738 614544 . + . ID=gene541;Name=YPSIP31758_RS03960;end_range=614544,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS03960;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 613738 614544 . + 0 ID=cds515;Parent=gene541;end_range=614544,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 614846 617131 . - . ID=gene542;Name=YPSIP31758_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03965;old_locus_tag=YpsIP31758_0522 NC_009708.1 Protein Homology CDS 614846 617131 . - 0 ID=cds516;Parent=gene542;Dbxref=Genbank:WP_012104447.1;Name=WP_012104447.1;gbkey=CDS;product=autotransporter;protein_id=WP_012104447.1;transl_table=11 NC_009708.1 RefSeq gene 617191 618186 . - . ID=gene543;Name=YPSIP31758_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03970;old_locus_tag=YpsIP31758_0523 NC_009708.1 Protein Homology CDS 617191 618186 . - 0 ID=cds517;Parent=gene543;Dbxref=Genbank:WP_012104448.1;Name=WP_012104448.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104448.1;transl_table=11 NC_009708.1 RefSeq gene 618288 619667 . - . ID=gene544;Name=YPSIP31758_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03975;old_locus_tag=YpsIP31758_0524 NC_009708.1 Protein Homology CDS 618288 619667 . - 0 ID=cds518;Parent=gene544;Dbxref=Genbank:WP_012104450.1;Name=WP_012104450.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104450.1;transl_table=11 NC_009708.1 RefSeq gene 619993 621108 . + . ID=gene545;Name=YPSIP31758_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03980;old_locus_tag=YpsIP31758_0525 NC_009708.1 Protein Homology CDS 619993 621108 . + 0 ID=cds519;Parent=gene545;Dbxref=Genbank:WP_012104451.1;Name=WP_012104451.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012104451.1;transl_table=11 NC_009708.1 RefSeq gene 621191 624544 . + . ID=gene546;Name=YPSIP31758_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03985;old_locus_tag=YpsIP31758_0526 NC_009708.1 Protein Homology CDS 621191 624544 . + 0 ID=cds520;Parent=gene546;Dbxref=Genbank:WP_012104452.1;Name=WP_012104452.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104452.1;transl_table=11 NC_009708.1 RefSeq gene 624653 625639 . + . ID=gene547;Name=YPSIP31758_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03990;old_locus_tag=YpsIP31758_0527 NC_009708.1 Protein Homology CDS 624653 625639 . + 0 ID=cds521;Parent=gene547;Dbxref=Genbank:WP_011193115.1;Name=WP_011193115.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011193115.1;transl_table=11 NC_009708.1 RefSeq gene 625716 626960 . + . ID=gene548;Name=YPSIP31758_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS03995;old_locus_tag=YpsIP31758_0528 NC_009708.1 Protein Homology CDS 625716 626960 . + 0 ID=cds522;Parent=gene548;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11 NC_009708.1 RefSeq gene 627014 627895 . + . ID=gene549;Name=YPSIP31758_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04000;old_locus_tag=YpsIP31758_0529 NC_009708.1 Protein Homology CDS 627014 627895 . + 0 ID=cds523;Parent=gene549;Dbxref=Genbank:WP_011193113.1;Name=WP_011193113.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011193113.1;transl_table=11 NC_009708.1 RefSeq gene 627895 628713 . + . ID=gene550;Name=YPSIP31758_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04005;old_locus_tag=YpsIP31758_0530 NC_009708.1 Protein Homology CDS 627895 628713 . + 0 ID=cds524;Parent=gene550;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11 NC_009708.1 RefSeq gene 628710 629225 . + . ID=gene551;Name=YPSIP31758_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04010;old_locus_tag=YpsIP31758_0531 NC_009708.1 Protein Homology CDS 628710 629225 . + 0 ID=cds525;Parent=gene551;Dbxref=Genbank:WP_012104453.1;Name=WP_012104453.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104453.1;transl_table=11 NC_009708.1 RefSeq gene 629276 631459 . + . ID=gene552;Name=YPSIP31758_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04015;old_locus_tag=YpsIP31758_0532 NC_009708.1 Protein Homology CDS 629276 631459 . + 0 ID=cds526;Parent=gene552;Dbxref=Genbank:WP_012104454.1;Name=WP_012104454.1;gbkey=CDS;product=glycosidase;protein_id=WP_012104454.1;transl_table=11 NC_009708.1 RefSeq gene 631523 633049 . - . ID=gene553;Name=YPSIP31758_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04020;old_locus_tag=YpsIP31758_0533 NC_009708.1 Protein Homology CDS 631523 633049 . - 0 ID=cds527;Parent=gene553;Dbxref=Genbank:WP_041175728.1;Name=WP_041175728.1;gbkey=CDS;product=transporter;protein_id=WP_041175728.1;transl_table=11 NC_009708.1 RefSeq gene 633054 634955 . - . ID=gene554;Name=YPSIP31758_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04025;old_locus_tag=YpsIP31758_0534 NC_009708.1 Protein Homology CDS 633054 634955 . - 0 ID=cds528;Parent=gene554;Dbxref=Genbank:WP_012104456.1;Name=WP_012104456.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_012104456.1;transl_table=11 NC_009708.1 RefSeq gene 634939 635988 . - . ID=gene555;Name=YPSIP31758_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04030;old_locus_tag=YpsIP31758_0535 NC_009708.1 Protein Homology CDS 634939 635988 . - 0 ID=cds529;Parent=gene555;Dbxref=Genbank:WP_011193108.1;Name=WP_011193108.1;gbkey=CDS;product=hemolysin D;protein_id=WP_011193108.1;transl_table=11 NC_009708.1 RefSeq gene 635998 636333 . - . ID=gene556;Name=YPSIP31758_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04035 NC_009708.1 Protein Homology CDS 635998 636333 . - 0 ID=cds530;Parent=gene556;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11 NC_009708.1 RefSeq gene 636330 636530 . - . ID=gene557;Name=YPSIP31758_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04040;old_locus_tag=YpsIP31758_0537 NC_009708.1 Protein Homology CDS 636330 636530 . - 0 ID=cds531;Parent=gene557;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NC_009708.1 RefSeq gene 636703 636810 . - . ID=gene558;Name=YPSIP31758_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04045 NC_009708.1 Protein Homology CDS 636703 636810 . - 0 ID=cds532;Parent=gene558;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11 NC_009708.1 RefSeq gene 637296 638528 . + . ID=gene559;Name=YPSIP31758_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04050;old_locus_tag=YpsIP31758_0538 NC_009708.1 Protein Homology CDS 637296 638528 . + 0 ID=cds533;Parent=gene559;Dbxref=Genbank:WP_041175729.1;Name=WP_041175729.1;gbkey=CDS;product=aminotransferase;protein_id=WP_041175729.1;transl_table=11 NC_009708.1 RefSeq gene 638521 639972 . + . ID=gene560;Name=YPSIP31758_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04055;old_locus_tag=YpsIP31758_0539 NC_009708.1 Protein Homology CDS 638521 639972 . + 0 ID=cds534;Parent=gene560;Dbxref=Genbank:WP_011193107.1;Name=WP_011193107.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_011193107.1;transl_table=11 NC_009708.1 RefSeq gene 639985 640422 . + . ID=gene561;Name=YPSIP31758_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04060;old_locus_tag=YpsIP31758_0540 NC_009708.1 Protein Homology CDS 639985 640422 . + 0 ID=cds535;Parent=gene561;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11 NC_009708.1 RefSeq gene 640556 641188 . + . ID=gene562;Name=YPSIP31758_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04065;old_locus_tag=YpsIP31758_0541 NC_009708.1 Protein Homology CDS 640556 641188 . + 0 ID=cds536;Parent=gene562;Dbxref=Genbank:WP_011193106.1;Name=WP_011193106.1;gbkey=CDS;product=histidine kinase;protein_id=WP_011193106.1;transl_table=11 NC_009708.1 RefSeq gene 641199 641579 . + . ID=gene563;Name=YPSIP31758_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04070;old_locus_tag=YpsIP31758_0542 NC_009708.1 Protein Homology CDS 641199 641579 . + 0 ID=cds537;Parent=gene563;Dbxref=Genbank:WP_012104458.1;Name=WP_012104458.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_012104458.1;transl_table=11 NC_009708.1 RefSeq gene 641864 642268 . + . ID=gene564;Name=YPSIP31758_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04075;old_locus_tag=YpsIP31758_0543 NC_009708.1 Protein Homology CDS 641864 642268 . + 0 ID=cds538;Parent=gene564;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11 NC_009708.1 RefSeq gene 642483 642785 . - . ID=gene565;Name=YPSIP31758_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04080;old_locus_tag=YpsIP31758_0544 NC_009708.1 Protein Homology CDS 642483 642785 . - 0 ID=cds539;Parent=gene565;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NC_009708.1 RefSeq gene 643045 643761 . - . ID=gene566;Name=YPSIP31758_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04085;old_locus_tag=YpsIP31758_0545 NC_009708.1 Protein Homology CDS 643045 643761 . - 0 ID=cds540;Parent=gene566;Dbxref=Genbank:WP_011193105.1;Name=WP_011193105.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_011193105.1;transl_table=11 NC_009708.1 RefSeq gene 643923 644879 . + . ID=gene567;Name=YPSIP31758_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04090;old_locus_tag=YpsIP31758_0547 NC_009708.1 Protein Homology CDS 643923 644879 . + 0 ID=cds541;Parent=gene567;Dbxref=Genbank:WP_012104459.1;Name=WP_012104459.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012104459.1;transl_table=11 NC_009708.1 RefSeq gene 645306 645863 . + . ID=gene568;Name=YPSIP31758_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04095;old_locus_tag=YpsIP31758_0548 NC_009708.1 Protein Homology CDS 645306 645863 . + 0 ID=cds542;Parent=gene568;Dbxref=Genbank:WP_012104460.1;Name=WP_012104460.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_012104460.1;transl_table=11 NC_009708.1 RefSeq gene 645860 645991 . - . ID=gene569;Name=YPSIP31758_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04100 NC_009708.1 Protein Homology CDS 645860 645991 . - 0 ID=cds543;Parent=gene569;Dbxref=Genbank:WP_032487993.1;Name=WP_032487993.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032487993.1;transl_table=11 NC_009708.1 RefSeq gene 646217 646416 . - . ID=gene570;Name=YPSIP31758_RS04105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04105;pseudo=true NC_009708.1 Protein Homology CDS 646217 646416 . - 0 ID=cds544;Parent=gene570;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 646840 647376 . + . ID=gene571;Name=YPSIP31758_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04110 NC_009708.1 Protein Homology CDS 646840 647376 . + 0 ID=cds545;Parent=gene571;Dbxref=Genbank:WP_041175832.1;Name=WP_041175832.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175832.1;transl_table=11 NC_009708.1 RefSeq gene 647385 647915 . + . ID=gene572;Name=YPSIP31758_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04115;old_locus_tag=YpsIP31758_0550 NC_009708.1 Protein Homology CDS 647385 647915 . + 0 ID=cds546;Parent=gene572;Dbxref=Genbank:WP_012104462.1;Name=WP_012104462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104462.1;transl_table=11 NC_009708.1 RefSeq gene 647929 648402 . + . ID=gene573;Name=YPSIP31758_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04120;old_locus_tag=YpsIP31758_0551 NC_009708.1 Protein Homology CDS 647929 648402 . + 0 ID=cds547;Parent=gene573;Dbxref=Genbank:WP_012104463.1;Name=WP_012104463.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104463.1;transl_table=11 NC_009708.1 RefSeq repeat_region 648431 649052 . + . ID=id76;gbkey=repeat_region NC_009708.1 RefSeq gene 648718 649056 . + . ID=gene574;Name=YPSIP31758_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04125;old_locus_tag=YpsIP31758_0552 NC_009708.1 Protein Homology CDS 648718 649056 . + 0 ID=cds548;Parent=gene574;Dbxref=Genbank:WP_012104464.1;Name=WP_012104464.1;gbkey=CDS;product=terminase;protein_id=WP_012104464.1;transl_table=11 NC_009708.1 RefSeq gene 649302 649378 . - . ID=gene575;Name=YPSIP31758_RS04130;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS04130;old_locus_tag=YpsIP31758_4209 NC_009708.1 tRNAscan-SE tRNA 649302 649378 . - . ID=rna26;Parent=gene575;anticodon=(pos:complement(649342..649344));gbkey=tRNA;product=tRNA-Met NC_009708.1 tRNAscan-SE exon 649302 649378 . - . ID=id77;Parent=rna26;anticodon=(pos:complement(649342..649344));gbkey=tRNA;product=tRNA-Met NC_009708.1 RefSeq gene 649574 651412 . - . ID=gene576;Name=YPSIP31758_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04135;old_locus_tag=YpsIP31758_0553 NC_009708.1 Protein Homology CDS 649574 651412 . - 0 ID=cds549;Parent=gene576;Dbxref=Genbank:WP_002210359.1;Name=WP_002210359.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NC_009708.1 RefSeq gene 651570 653318 . - . ID=gene577;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04140;old_locus_tag=YpsIP31758_0554 NC_009708.1 Protein Homology CDS 651570 653318 . - 0 ID=cds550;Parent=gene577;Dbxref=Genbank:WP_002210358.1;Name=WP_002210358.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NC_009708.1 RefSeq gene 653454 653669 . - . ID=gene578;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04145;old_locus_tag=YpsIP31758_0555 NC_009708.1 Protein Homology CDS 653454 653669 . - 0 ID=cds551;Parent=gene578;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NC_009708.1 RefSeq gene 654075 655088 . + . ID=gene579;Name=YPSIP31758_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04150;old_locus_tag=YpsIP31758_0556 NC_009708.1 Protein Homology CDS 654075 655088 . + 0 ID=cds552;Parent=gene579;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11 NC_009708.1 RefSeq gene 655334 655984 . - . ID=gene580;Name=YPSIP31758_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04155;old_locus_tag=YpsIP31758_0557 NC_009708.1 Protein Homology CDS 655334 655984 . - 0 ID=cds553;Parent=gene580;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11 NC_009708.1 RefSeq gene 656092 656451 . + . ID=gene581;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04160;old_locus_tag=YpsIP31758_0558 NC_009708.1 Protein Homology CDS 656092 656451 . + 0 ID=cds554;Parent=gene581;Dbxref=Genbank:WP_002212199.1;Name=WP_002212199.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002212199.1;transl_table=11 NC_009708.1 RefSeq gene 656725 657543 . + . ID=gene582;Name=YPSIP31758_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04165;old_locus_tag=YpsIP31758_0559 NC_009708.1 Protein Homology CDS 656725 657543 . + 0 ID=cds555;Parent=gene582;Dbxref=Genbank:WP_002212198.1;Name=WP_002212198.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_002212198.1;transl_table=11 NC_009708.1 RefSeq gene 657779 659017 . - . ID=gene583;Name=YPSIP31758_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04170;old_locus_tag=YpsIP31758_0560 NC_009708.1 Protein Homology CDS 657779 659017 . - 0 ID=cds556;Parent=gene583;Dbxref=Genbank:WP_011193101.1;Name=WP_011193101.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_011193101.1;transl_table=11 NC_009708.1 RefSeq gene 659195 659815 . - . ID=gene584;Name=YPSIP31758_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04175;old_locus_tag=YpsIP31758_0561 NC_009708.1 Protein Homology CDS 659195 659815 . - 0 ID=cds557;Parent=gene584;Dbxref=Genbank:WP_011193100.1;Name=WP_011193100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193100.1;transl_table=11 NC_009708.1 RefSeq gene 660119 661426 . + . ID=gene585;Name=YPSIP31758_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04180;old_locus_tag=YpsIP31758_0562 NC_009708.1 Protein Homology CDS 660119 661426 . + 0 ID=cds558;Parent=gene585;Dbxref=Genbank:WP_002212195.1;Name=WP_002212195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212195.1;transl_table=11 NC_009708.1 RefSeq gene 661598 664453 . + . ID=gene586;Name=YPSIP31758_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04185;old_locus_tag=YpsIP31758_0563 NC_009708.1 Protein Homology CDS 661598 664453 . + 0 ID=cds559;Parent=gene586;Dbxref=Genbank:WP_012104465.1;Name=WP_012104465.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_012104465.1;transl_table=11 NC_009708.1 RefSeq gene 664588 666018 . + . ID=gene587;Name=YPSIP31758_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04190;old_locus_tag=YpsIP31758_0564 NC_009708.1 Protein Homology CDS 664588 666018 . + 0 ID=cds560;Parent=gene587;Dbxref=Genbank:WP_011193099.1;Name=WP_011193099.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_011193099.1;transl_table=11 NC_009708.1 RefSeq gene 666055 667305 . + . ID=gene588;Name=YPSIP31758_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04195;old_locus_tag=YpsIP31758_0565 NC_009708.1 Protein Homology CDS 666055 667305 . + 0 ID=cds561;Parent=gene588;Dbxref=Genbank:WP_002212192.1;Name=WP_002212192.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_002212192.1;transl_table=11 NC_009708.1 RefSeq repeat_region 667341 667516 . + . ID=id78;gbkey=repeat_region NC_009708.1 RefSeq gene 667630 667911 . - . ID=gene589;Name=YPSIP31758_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04200;old_locus_tag=YpsIP31758_0566 NC_009708.1 Protein Homology CDS 667630 667911 . - 0 ID=cds562;Parent=gene589;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11 NC_009708.1 RefSeq gene 668067 668319 . + . ID=gene590;Name=YPSIP31758_RS04205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04205;pseudo=true NC_009708.1 Protein Homology CDS 668067 668319 . + 0 ID=cds563;Parent=gene590;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 668481 669134 . + . ID=gene591;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04210;old_locus_tag=YpsIP31758_0567 NC_009708.1 Protein Homology CDS 668481 669134 . + 0 ID=cds564;Parent=gene591;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NC_009708.1 RefSeq gene 669576 670358 . + . ID=gene592;Name=YPSIP31758_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04215;old_locus_tag=YpsIP31758_0570 NC_009708.1 Protein Homology CDS 669576 670358 . + 0 ID=cds565;Parent=gene592;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11 NC_009708.1 RefSeq repeat_region 670359 670729 . + . ID=id79;gbkey=repeat_region NC_009708.1 RefSeq gene 670765 671925 . - . ID=gene593;Name=YPSIP31758_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04220;old_locus_tag=YpsIP31758_0571 NC_009708.1 Protein Homology CDS 670765 671925 . - 0 ID=cds566;Parent=gene593;Dbxref=Genbank:WP_012104467.1;Name=WP_012104467.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104467.1;transl_table=11 NC_009708.1 RefSeq gene 671935 672618 . - . ID=gene594;Name=YPSIP31758_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04225;old_locus_tag=YpsIP31758_0572 NC_009708.1 Protein Homology CDS 671935 672618 . - 0 ID=cds567;Parent=gene594;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11 NC_009708.1 RefSeq gene 672687 672857 . + . ID=gene595;Name=YPSIP31758_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04230 NC_009708.1 Protein Homology CDS 672687 672857 . + 0 ID=cds568;Parent=gene595;Dbxref=Genbank:WP_012303541.1;Name=WP_012303541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303541.1;transl_table=11 NC_009708.1 RefSeq gene 672922 674316 . - . ID=gene596;Name=YPSIP31758_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04235;old_locus_tag=YpsIP31758_0573 NC_009708.1 Protein Homology CDS 672922 674316 . - 0 ID=cds569;Parent=gene596;Dbxref=Genbank:WP_011193098.1;Name=WP_011193098.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_011193098.1;transl_table=11 NC_009708.1 RefSeq gene 674712 675344 . + . ID=gene597;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04240;old_locus_tag=YpsIP31758_0574 NC_009708.1 Protein Homology CDS 674712 675344 . + 0 ID=cds570;Parent=gene597;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11 NC_009708.1 RefSeq gene 675378 675803 . + . ID=gene598;Name=YPSIP31758_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04245;old_locus_tag=YpsIP31758_0575 NC_009708.1 Protein Homology CDS 675378 675803 . + 0 ID=cds571;Parent=gene598;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11 NC_009708.1 RefSeq gene 675884 676711 . + . ID=gene599;Name=YPSIP31758_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04250;old_locus_tag=YpsIP31758_0576 NC_009708.1 Protein Homology CDS 675884 676711 . + 0 ID=cds572;Parent=gene599;Dbxref=Genbank:WP_012104468.1;Name=WP_012104468.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_012104468.1;transl_table=11 NC_009708.1 RefSeq gene 676711 677292 . + . ID=gene600;Name=YPSIP31758_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04255;old_locus_tag=YpsIP31758_0577 NC_009708.1 Protein Homology CDS 676711 677292 . + 0 ID=cds573;Parent=gene600;Dbxref=Genbank:WP_011193096.1;Name=WP_011193096.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_011193096.1;transl_table=11 NC_009708.1 RefSeq gene 677394 679289 . + . ID=gene601;Name=YPSIP31758_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04260;old_locus_tag=YpsIP31758_0578 NC_009708.1 Protein Homology CDS 677394 679289 . + 0 ID=cds574;Parent=gene601;Dbxref=Genbank:WP_002212181.1;Name=WP_002212181.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NC_009708.1 RefSeq gene 679293 680204 . + . ID=gene602;Name=YPSIP31758_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04265;old_locus_tag=YpsIP31758_0579 NC_009708.1 Protein Homology CDS 679293 680204 . + 0 ID=cds575;Parent=gene602;Dbxref=Genbank:WP_011193094.1;Name=WP_011193094.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011193094.1;transl_table=11 NC_009708.1 RefSeq gene 680262 680846 . - . ID=gene603;Name=YPSIP31758_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04270;old_locus_tag=YpsIP31758_0580 NC_009708.1 Protein Homology CDS 680262 680846 . - 0 ID=cds576;Parent=gene603;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11 NC_009708.1 RefSeq gene 680919 681167 . - . ID=gene604;Name=YPSIP31758_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04275 NC_009708.1 Protein Homology CDS 680919 681167 . - 0 ID=cds577;Parent=gene604;Dbxref=Genbank:WP_002216196.1;Name=WP_002216196.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216196.1;transl_table=11 NC_009708.1 RefSeq gene 681150 683423 . + . ID=gene605;Name=YPSIP31758_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04280;old_locus_tag=YpsIP31758_0581 NC_009708.1 Protein Homology CDS 681150 683423 . + 0 ID=cds578;Parent=gene605;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NC_009708.1 RefSeq gene 683712 684443 . + . ID=gene606;Name=YPSIP31758_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04285;old_locus_tag=YpsIP31758_0582 NC_009708.1 Protein Homology CDS 683712 684443 . + 0 ID=cds579;Parent=gene606;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11 NC_009708.1 RefSeq gene 684622 686046 . + . ID=gene607;Name=YPSIP31758_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04290;old_locus_tag=YpsIP31758_0583 NC_009708.1 Protein Homology CDS 684622 686046 . + 0 ID=cds580;Parent=gene607;Dbxref=Genbank:WP_012104470.1;Name=WP_012104470.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_012104470.1;transl_table=11 NC_009708.1 RefSeq gene 686324 686872 . - . ID=gene608;Name=YPSIP31758_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04295;old_locus_tag=YpsIP31758_0584 NC_009708.1 Protein Homology CDS 686324 686872 . - 0 ID=cds581;Parent=gene608;Dbxref=Genbank:WP_012104471.1;Name=WP_012104471.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104471.1;transl_table=11 NC_009708.1 RefSeq gene 687316 689679 . + . ID=gene609;Name=YPSIP31758_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04300;old_locus_tag=YpsIP31758_0585 NC_009708.1 Protein Homology CDS 687316 689679 . + 0 ID=cds582;Parent=gene609;Dbxref=Genbank:WP_012104472.1;Name=WP_012104472.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_012104472.1;transl_table=11 NC_009708.1 RefSeq gene 689701 690534 . - . ID=gene610;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04305;old_locus_tag=YpsIP31758_0586 NC_009708.1 Protein Homology CDS 689701 690534 . - 0 ID=cds583;Parent=gene610;Dbxref=Genbank:WP_041175731.1;Name=WP_041175731.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_041175731.1;transl_table=11 NC_009708.1 RefSeq gene 690681 690890 . + . ID=gene611;Name=YPSIP31758_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04310 NC_009708.1 Protein Homology CDS 690681 690890 . + 0 ID=cds584;Parent=gene611;Dbxref=Genbank:WP_041175732.1;Name=WP_041175732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175732.1;transl_table=11 NC_009708.1 RefSeq gene 690953 692110 . - . ID=gene612;Name=YPSIP31758_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04315;old_locus_tag=YpsIP31758_0587 NC_009708.1 Protein Homology CDS 690953 692110 . - 0 ID=cds585;Parent=gene612;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11 NC_009708.1 RefSeq gene 692508 693401 . + . ID=gene613;Name=YPSIP31758_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04320;old_locus_tag=YpsIP31758_0588 NC_009708.1 Protein Homology CDS 692508 693401 . + 0 ID=cds586;Parent=gene613;Dbxref=Genbank:WP_002213786.1;Name=WP_002213786.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NC_009708.1 RefSeq gene 693493 694155 . - . ID=gene614;Name=YPSIP31758_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04325;old_locus_tag=YpsIP31758_0589 NC_009708.1 Protein Homology CDS 693493 694155 . - 0 ID=cds587;Parent=gene614;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11 NC_009708.1 RefSeq gene 694348 695559 . - . ID=gene615;Name=YPSIP31758_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04330;old_locus_tag=YpsIP31758_0590 NC_009708.1 Protein Homology CDS 694348 695559 . - 0 ID=cds588;Parent=gene615;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NC_009708.1 RefSeq gene 696416 697129 . + . ID=gene616;Name=YPSIP31758_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04335;old_locus_tag=YpsIP31758_0591 NC_009708.1 Protein Homology CDS 696416 697129 . + 0 ID=cds589;Parent=gene616;Dbxref=Genbank:WP_012104474.1;Name=WP_012104474.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_012104474.1;transl_table=11 NC_009708.1 RefSeq gene 697133 697564 . + . ID=gene617;Name=YPSIP31758_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04340;old_locus_tag=YpsIP31758_0592 NC_009708.1 Protein Homology CDS 697133 697564 . + 0 ID=cds590;Parent=gene617;Dbxref=Genbank:WP_002212170.1;Name=WP_002212170.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_002212170.1;transl_table=11 NC_009708.1 RefSeq gene 697661 699217 . - . ID=gene618;Name=YPSIP31758_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04345;old_locus_tag=YpsIP31758_0593 NC_009708.1 Protein Homology CDS 697661 699217 . - 0 ID=cds591;Parent=gene618;Dbxref=Genbank:WP_012104475.1;Name=WP_012104475.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104475.1;transl_table=11 NC_009708.1 RefSeq gene 699242 699814 . - . ID=gene619;Name=YPSIP31758_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04350;old_locus_tag=YpsIP31758_0594 NC_009708.1 Protein Homology CDS 699242 699814 . - 0 ID=cds592;Parent=gene619;Dbxref=Genbank:WP_002212168.1;Name=WP_002212168.1;gbkey=CDS;product=pseudopilin;protein_id=WP_002212168.1;transl_table=11 NC_009708.1 RefSeq gene 699798 700271 . - . ID=gene620;Name=YPSIP31758_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04355;old_locus_tag=YpsIP31758_0595 NC_009708.1 Protein Homology CDS 699798 700271 . - 0 ID=cds593;Parent=gene620;Dbxref=Genbank:WP_049756379.1;Name=WP_049756379.1;gbkey=CDS;product=pilus assembly protein TadE;protein_id=WP_049756379.1;transl_table=11 NC_009708.1 RefSeq gene 700268 701038 . - . ID=gene621;Name=YPSIP31758_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04360;old_locus_tag=YpsIP31758_0596 NC_009708.1 Protein Homology CDS 700268 701038 . - 0 ID=cds594;Parent=gene621;Dbxref=Genbank:WP_012104477.1;Name=WP_012104477.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_012104477.1;transl_table=11 NC_009708.1 RefSeq gene 701022 701855 . - . ID=gene622;Name=YPSIP31758_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04365;old_locus_tag=YpsIP31758_0597 NC_009708.1 Protein Homology CDS 701022 701855 . - 0 ID=cds595;Parent=gene622;Dbxref=Genbank:WP_012104478.1;Name=WP_012104478.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_012104478.1;transl_table=11 NC_009708.1 RefSeq gene 701852 702727 . - . ID=gene623;Name=YPSIP31758_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04370;old_locus_tag=YpsIP31758_0598 NC_009708.1 Protein Homology CDS 701852 702727 . - 0 ID=cds596;Parent=gene623;Dbxref=Genbank:WP_012104479.1;Name=WP_012104479.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_012104479.1;transl_table=11 NC_009708.1 RefSeq gene 702724 704010 . - . ID=gene624;Name=YPSIP31758_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04375;old_locus_tag=YpsIP31758_0599 NC_009708.1 Protein Homology CDS 702724 704010 . - 0 ID=cds597;Parent=gene624;Dbxref=Genbank:WP_002213785.1;Name=WP_002213785.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002213785.1;transl_table=11 NC_009708.1 RefSeq gene 704022 705149 . - . ID=gene625;Name=YPSIP31758_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04380;old_locus_tag=YpsIP31758_0600 NC_009708.1 Protein Homology CDS 704022 705149 . - 0 ID=cds598;Parent=gene625;Dbxref=Genbank:WP_002213784.1;Name=WP_002213784.1;gbkey=CDS;product=pilus assembly protein CpaE;protein_id=WP_002213784.1;transl_table=11 NC_009708.1 RefSeq gene 705160 705450 . - . ID=gene626;Name=YPSIP31758_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04385 NC_009708.1 Protein Homology CDS 705160 705450 . - 0 ID=cds599;Parent=gene626;Dbxref=Genbank:WP_038400842.1;Name=WP_038400842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400842.1;transl_table=11 NC_009708.1 RefSeq gene 705447 706766 . - . ID=gene627;Name=YPSIP31758_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04390;old_locus_tag=YpsIP31758_0601 NC_009708.1 Protein Homology CDS 705447 706766 . - 0 ID=cds600;Parent=gene627;Dbxref=Genbank:WP_012104480.1;Name=WP_012104480.1;gbkey=CDS;product=secretin;protein_id=WP_012104480.1;transl_table=11 NC_009708.1 RefSeq gene 706763 707584 . - . ID=gene628;Name=YPSIP31758_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04395;old_locus_tag=YpsIP31758_0602 NC_009708.1 Protein Homology CDS 706763 707584 . - 0 ID=cds601;Parent=gene628;Dbxref=Genbank:WP_012104481.1;Name=WP_012104481.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_012104481.1;transl_table=11 NC_009708.1 RefSeq gene 707636 708058 . - . ID=gene629;Name=YPSIP31758_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04400;old_locus_tag=YpsIP31758_0603 NC_009708.1 Protein Homology CDS 707636 708058 . - 0 ID=cds602;Parent=gene629;Dbxref=Genbank:WP_025381406.1;Name=WP_025381406.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_025381406.1;transl_table=11 NC_009708.1 RefSeq gene 708122 708319 . - . ID=gene630;Name=YPSIP31758_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04405;old_locus_tag=YpsIP31758_0604 NC_009708.1 Protein Homology CDS 708122 708319 . - 0 ID=cds603;Parent=gene630;Dbxref=Genbank:WP_012104483.1;Name=WP_012104483.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_012104483.1;transl_table=11 NC_009708.1 RefSeq gene 708541 709128 . - . ID=gene631;Name=YPSIP31758_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04410;old_locus_tag=YpsIP31758_0605 NC_009708.1 Protein Homology CDS 708541 709128 . - 0 ID=cds604;Parent=gene631;Dbxref=Genbank:WP_012104484.1;Name=WP_012104484.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104484.1;transl_table=11 NC_009708.1 RefSeq gene 710040 710306 . - . ID=gene632;Name=YPSIP31758_RS04415;end_range=710306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04415;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 710040 710306 . - 0 ID=cds605;Parent=gene632;end_range=710306,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 710102 710431 . + . ID=id80;gbkey=repeat_region NC_009708.1 RefSeq gene 710841 719240 . + . ID=gene633;Name=YPSIP31758_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22545;old_locus_tag=YpsIP31758_0608 NC_009708.1 Protein Homology CDS 710841 719240 . + 0 ID=cds606;Parent=gene633;Dbxref=Genbank:WP_049756380.1;Name=WP_049756380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756380.1;transl_table=11 NC_009708.1 RefSeq repeat_region 712782 713789 . + . ID=id81;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 713863 714092 . + . ID=id82;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 714166 718409 . + . ID=id83;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 719346 719675 . + . ID=id84;gbkey=repeat_region NC_009708.1 RefSeq gene 719838 721232 . - . ID=gene634;Name=YPSIP31758_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04425;old_locus_tag=YpsIP31758_0610 NC_009708.1 Protein Homology CDS 719838 721232 . - 0 ID=cds607;Parent=gene634;Dbxref=Genbank:WP_012104488.1;Name=WP_012104488.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104488.1;transl_table=11 NC_009708.1 RefSeq gene 721297 722712 . - . ID=gene635;Name=YPSIP31758_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04430;old_locus_tag=YpsIP31758_0611 NC_009708.1 Protein Homology CDS 721297 722712 . - 0 ID=cds608;Parent=gene635;Dbxref=Genbank:WP_012104489.1;Name=WP_012104489.1;gbkey=CDS;product=chitinase;protein_id=WP_012104489.1;transl_table=11 NC_009708.1 RefSeq gene 723871 724401 . + . ID=gene636;Name=YPSIP31758_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04435;old_locus_tag=YpsIP31758_0613 NC_009708.1 Protein Homology CDS 723871 724401 . + 0 ID=cds609;Parent=gene636;Dbxref=Genbank:WP_011192686.1;Name=WP_011192686.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_011192686.1;transl_table=11 NC_009708.1 RefSeq gene 724708 727188 . + . ID=gene637;Name=YPSIP31758_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04440;old_locus_tag=YpsIP31758_0614 NC_009708.1 Protein Homology CDS 724708 727188 . + 0 ID=cds610;Parent=gene637;Dbxref=Genbank:WP_012104491.1;Name=WP_012104491.1;gbkey=CDS;product=fimbrial protein SteB;protein_id=WP_012104491.1;transl_table=11 NC_009708.1 RefSeq gene 727206 727925 . + . ID=gene638;Name=YPSIP31758_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04445;old_locus_tag=YpsIP31758_0615 NC_009708.1 Protein Homology CDS 727206 727925 . + 0 ID=cds611;Parent=gene638;Dbxref=Genbank:WP_012104492.1;Name=WP_012104492.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_012104492.1;transl_table=11 NC_009708.1 RefSeq gene 727950 729053 . + . ID=gene639;Name=YPSIP31758_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04450;old_locus_tag=YpsIP31758_0616 NC_009708.1 Protein Homology CDS 727950 729053 . + 0 ID=cds612;Parent=gene639;Dbxref=Genbank:WP_012104493.1;Name=WP_012104493.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_012104493.1;transl_table=11 NC_009708.1 RefSeq repeat_region 729102 729235 . + . ID=id85;gbkey=repeat_region NC_009708.1 RefSeq gene 729265 730344 . - . ID=gene640;Name=YPSIP31758_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04455;old_locus_tag=YpsIP31758_0617 NC_009708.1 Protein Homology CDS 729265 730344 . - 0 ID=cds613;Parent=gene640;Dbxref=Genbank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11 NC_009708.1 RefSeq gene 731200 732195 . + . ID=gene641;Name=YPSIP31758_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04460;old_locus_tag=YpsIP31758_0619 NC_009708.1 Protein Homology CDS 731200 732195 . + 0 ID=cds614;Parent=gene641;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11 NC_009708.1 RefSeq gene 732287 732856 . - . ID=gene642;Name=YPSIP31758_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04465;old_locus_tag=YpsIP31758_0620 NC_009708.1 Protein Homology CDS 732287 732856 . - 0 ID=cds615;Parent=gene642;Dbxref=Genbank:WP_011193073.1;Name=WP_011193073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193073.1;transl_table=11 NC_009708.1 RefSeq gene 733059 735155 . - . ID=gene643;Name=YPSIP31758_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04470;old_locus_tag=YpsIP31758_0622 NC_009708.1 Protein Homology CDS 733059 735155 . - 0 ID=cds616;Parent=gene643;Dbxref=Genbank:WP_012104496.1;Name=WP_012104496.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_012104496.1;transl_table=11 NC_009708.1 RefSeq gene 735142 736275 . - . ID=gene644;Name=YPSIP31758_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04475;old_locus_tag=YpsIP31758_0623 NC_009708.1 Protein Homology CDS 735142 736275 . - 0 ID=cds617;Parent=gene644;Dbxref=Genbank:WP_012104497.1;Name=WP_012104497.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_012104497.1;transl_table=11 NC_009708.1 RefSeq gene 736275 737048 . - . ID=gene645;Name=YPSIP31758_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04480;old_locus_tag=YpsIP31758_0624 NC_009708.1 Protein Homology CDS 736275 737048 . - 0 ID=cds618;Parent=gene645;Dbxref=Genbank:WP_012104498.1;Name=WP_012104498.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_012104498.1;transl_table=11 NC_009708.1 RefSeq gene 737055 737327 . - . ID=gene646;Name=YPSIP31758_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04485;old_locus_tag=YpsIP31758_0625 NC_009708.1 Protein Homology CDS 737055 737327 . - 0 ID=cds619;Parent=gene646;Dbxref=Genbank:WP_012104499.1;Name=WP_012104499.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_012104499.1;transl_table=11 NC_009708.1 RefSeq gene 737329 738099 . - . ID=gene647;Name=YPSIP31758_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04490;old_locus_tag=YpsIP31758_0626 NC_009708.1 Protein Homology CDS 737329 738099 . - 0 ID=cds620;Parent=gene647;Dbxref=Genbank:WP_012104500.1;Name=WP_012104500.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_012104500.1;transl_table=11 NC_009708.1 RefSeq gene 738096 738509 . - . ID=gene648;Name=YPSIP31758_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04495;old_locus_tag=YpsIP31758_0627 NC_009708.1 Protein Homology CDS 738096 738509 . - 0 ID=cds621;Parent=gene648;Dbxref=Genbank:WP_012104501.1;Name=WP_012104501.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_012104501.1;transl_table=11 NC_009708.1 RefSeq gene 738502 739380 . - . ID=gene649;Name=YPSIP31758_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04500;old_locus_tag=YpsIP31758_0628 NC_009708.1 Protein Homology CDS 738502 739380 . - 0 ID=cds622;Parent=gene649;Dbxref=Genbank:WP_012104502.1;Name=WP_012104502.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_012104502.1;transl_table=11 NC_009708.1 RefSeq gene 739894 740922 . + . ID=gene650;Name=YPSIP31758_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04505;old_locus_tag=YpsIP31758_0629 NC_009708.1 Protein Homology CDS 739894 740922 . + 0 ID=cds623;Parent=gene650;Dbxref=Genbank:WP_012104503.1;Name=WP_012104503.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_012104503.1;transl_table=11 NC_009708.1 RefSeq gene 740939 741319 . + . ID=gene651;Name=YPSIP31758_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04510;old_locus_tag=YpsIP31758_0630 NC_009708.1 Protein Homology CDS 740939 741319 . + 0 ID=cds624;Parent=gene651;Dbxref=Genbank:WP_012104504.1;Name=WP_012104504.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_012104504.1;transl_table=11 NC_009708.1 RefSeq gene 741329 742969 . + . ID=gene652;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04515;old_locus_tag=YpsIP31758_0631 NC_009708.1 Protein Homology CDS 741329 742969 . + 0 ID=cds625;Parent=gene652;Dbxref=Genbank:WP_012104505.1;Name=WP_012104505.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=WP_012104505.1;transl_table=11 NC_009708.1 RefSeq gene 742941 743984 . + . ID=gene653;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04520;old_locus_tag=YpsIP31758_0632 NC_009708.1 Protein Homology CDS 742941 743984 . + 0 ID=cds626;Parent=gene653;Dbxref=Genbank:WP_012104506.1;Name=WP_012104506.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_012104506.1;transl_table=11 NC_009708.1 RefSeq gene 743989 744705 . + . ID=gene654;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04525;old_locus_tag=YpsIP31758_0633 NC_009708.1 Protein Homology CDS 743989 744705 . + 0 ID=cds627;Parent=gene654;Dbxref=Genbank:WP_012104507.1;Name=WP_012104507.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_012104507.1;transl_table=11 NC_009708.1 RefSeq gene 744698 746038 . + . ID=gene655;Name=YPSIP31758_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04530;old_locus_tag=YpsIP31758_0634 NC_009708.1 Protein Homology CDS 744698 746038 . + 0 ID=cds628;Parent=gene655;Dbxref=Genbank:WP_012104508.1;Name=WP_012104508.1;gbkey=CDS;product=ATP synthase;protein_id=WP_012104508.1;transl_table=11 NC_009708.1 RefSeq gene 746042 746479 . + . ID=gene656;Name=YPSIP31758_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04535;old_locus_tag=YpsIP31758_0635 NC_009708.1 Protein Homology CDS 746042 746479 . + 0 ID=cds629;Parent=gene656;Dbxref=Genbank:WP_012104509.1;Name=WP_012104509.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_012104509.1;transl_table=11 NC_009708.1 RefSeq gene 746749 747174 . - . ID=gene657;Name=YPSIP31758_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04540;old_locus_tag=YpsIP31758_0636 NC_009708.1 Protein Homology CDS 746749 747174 . - 0 ID=cds630;Parent=gene657;Dbxref=Genbank:WP_012104510.1;Name=WP_012104510.1;gbkey=CDS;product=flagellar protein FlgN;protein_id=WP_012104510.1;transl_table=11 NC_009708.1 RefSeq gene 747181 747447 . - . ID=gene658;Name=YPSIP31758_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04545;old_locus_tag=YpsIP31758_0637 NC_009708.1 Protein Homology CDS 747181 747447 . - 0 ID=cds631;Parent=gene658;Dbxref=Genbank:WP_012104511.1;Name=WP_012104511.1;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_012104511.1;transl_table=11 NC_009708.1 RefSeq gene 747657 748505 . - . ID=gene659;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04550;old_locus_tag=YpsIP31758_0638 NC_009708.1 Protein Homology CDS 747657 748505 . - 0 ID=cds632;Parent=gene659;Dbxref=Genbank:WP_041175836.1;Name=WP_041175836.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_041175836.1;transl_table=11 NC_009708.1 RefSeq gene 748563 748928 . + . ID=gene660;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04555;old_locus_tag=YpsIP31758_0639 NC_009708.1 Protein Homology CDS 748563 748928 . + 0 ID=cds633;Parent=gene660;Dbxref=Genbank:WP_012104513.1;Name=WP_012104513.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_012104513.1;transl_table=11 NC_009708.1 RefSeq gene 748931 749356 . + . ID=gene661;Name=YPSIP31758_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04560;old_locus_tag=YpsIP31758_0640 NC_009708.1 Protein Homology CDS 748931 749356 . + 0 ID=cds634;Parent=gene661;Dbxref=Genbank:WP_012104514.1;Name=WP_012104514.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_012104514.1;transl_table=11 NC_009708.1 RefSeq gene 749359 750015 . + . ID=gene662;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04565;old_locus_tag=YpsIP31758_0641 NC_009708.1 Protein Homology CDS 749359 750015 . + 0 ID=cds635;Parent=gene662;Dbxref=Genbank:WP_012104515.1;Name=WP_012104515.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_012104515.1;transl_table=11 NC_009708.1 RefSeq gene 750070 751278 . + . ID=gene663;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04570;old_locus_tag=YpsIP31758_0642 NC_009708.1 Protein Homology CDS 750070 751278 . + 0 ID=cds636;Parent=gene663;Dbxref=Genbank:WP_012104516.1;Name=WP_012104516.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_012104516.1;transl_table=11 NC_009708.1 RefSeq gene 751278 752009 . + . ID=gene664;Name=YPSIP31758_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04575;old_locus_tag=YpsIP31758_0643 NC_009708.1 Protein Homology CDS 751278 752009 . + 0 ID=cds637;Parent=gene664;Dbxref=Genbank:WP_012104517.1;Name=WP_012104517.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_012104517.1;transl_table=11 NC_009708.1 RefSeq gene 752077 752862 . + . ID=gene665;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04580;old_locus_tag=YpsIP31758_0644 NC_009708.1 Protein Homology CDS 752077 752862 . + 0 ID=cds638;Parent=gene665;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NC_009708.1 RefSeq gene 752897 753562 . + . ID=gene666;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04585;old_locus_tag=YpsIP31758_0645 NC_009708.1 Protein Homology CDS 752897 753562 . + 0 ID=cds639;Parent=gene666;Dbxref=Genbank:WP_011193059.1;Name=WP_011193059.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein;protein_id=WP_011193059.1;transl_table=11 NC_009708.1 RefSeq gene 753692 754759 . + . ID=gene667;Name=YPSIP31758_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04590;old_locus_tag=YpsIP31758_0646 NC_009708.1 Protein Homology CDS 753692 754759 . + 0 ID=cds640;Parent=gene667;Dbxref=Genbank:WP_048677807.1;Name=WP_048677807.1;gbkey=CDS;product=flagellar P-ring protein FlgI;protein_id=WP_048677807.1;transl_table=11 NC_009708.1 RefSeq gene 754769 755062 . + . ID=gene668;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04595;old_locus_tag=YpsIP31758_0647 NC_009708.1 Protein Homology CDS 754769 755062 . + 0 ID=cds641;Parent=gene668;Dbxref=Genbank:WP_012104519.1;Name=WP_012104519.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_012104519.1;transl_table=11 NC_009708.1 RefSeq gene 755165 756526 . + . ID=gene669;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04600;old_locus_tag=YpsIP31758_0648 NC_009708.1 Protein Homology CDS 755165 756526 . + 0 ID=cds642;Parent=gene669;Dbxref=Genbank:WP_012104520.1;Name=WP_012104520.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_012104520.1;transl_table=11 NC_009708.1 RefSeq gene 756558 757475 . + . ID=gene670;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04605;old_locus_tag=YpsIP31758_0649 NC_009708.1 Protein Homology CDS 756558 757475 . + 0 ID=cds643;Parent=gene670;Dbxref=Genbank:WP_012104521.1;Name=WP_012104521.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_012104521.1;transl_table=11 NC_009708.1 RefSeq gene 757487 758500 . + . ID=gene671;Name=YPSIP31758_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04610;old_locus_tag=YpsIP31758_0650 NC_009708.1 Protein Homology CDS 757487 758500 . + 0 ID=cds644;Parent=gene671;Dbxref=Genbank:WP_012104522.1;Name=WP_012104522.1;gbkey=CDS;product=flagellar hook associated protein lafW;protein_id=WP_012104522.1;transl_table=11 NC_009708.1 RefSeq gene 758664 759110 . - . ID=gene672;Name=YPSIP31758_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04615;old_locus_tag=YpsIP31758_0651 NC_009708.1 Protein Homology CDS 758664 759110 . - 0 ID=cds645;Parent=gene672;Dbxref=Genbank:WP_012104523.1;Name=WP_012104523.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104523.1;transl_table=11 NC_009708.1 RefSeq gene 759091 760137 . - . ID=gene673;Name=YPSIP31758_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04620;old_locus_tag=YpsIP31758_0652 NC_009708.1 Protein Homology CDS 759091 760137 . - 0 ID=cds646;Parent=gene673;Dbxref=Genbank:WP_012104524.1;Name=WP_012104524.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104524.1;transl_table=11 NC_009708.1 RefSeq repeat_region 760696 761287 . + . ID=id86;gbkey=repeat_region NC_009708.1 RefSeq gene 760761 761954 . + . ID=gene674;Name=YPSIP31758_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04625;old_locus_tag=YpsIP31758_0653 NC_009708.1 Protein Homology CDS 760761 761954 . + 0 ID=cds647;Parent=gene674;Dbxref=Genbank:WP_012104525.1;Name=WP_012104525.1;gbkey=CDS;product=flagellin;protein_id=WP_012104525.1;transl_table=11 NC_009708.1 RefSeq repeat_region 762079 762288 . + . ID=id87;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 762541 763132 . + . ID=id88;gbkey=repeat_region NC_009708.1 RefSeq gene 762606 763790 . + . ID=gene675;Name=YPSIP31758_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04630;old_locus_tag=YpsIP31758_0654 NC_009708.1 Protein Homology CDS 762606 763790 . + 0 ID=cds648;Parent=gene675;Dbxref=Genbank:WP_012104526.1;Name=WP_012104526.1;gbkey=CDS;product=flagellin;protein_id=WP_012104526.1;transl_table=11 NC_009708.1 RefSeq gene 764010 765296 . + . ID=gene676;Name=YPSIP31758_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04635;old_locus_tag=YpsIP31758_0655 NC_009708.1 Protein Homology CDS 764010 765296 . + 0 ID=cds649;Parent=gene676;Dbxref=Genbank:WP_012104527.1;Name=WP_012104527.1;gbkey=CDS;product=flagellar hook protein;protein_id=WP_012104527.1;transl_table=11 NC_009708.1 RefSeq gene 765306 765689 . + . ID=gene677;Name=YPSIP31758_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04640;old_locus_tag=YpsIP31758_0656 NC_009708.1 Protein Homology CDS 765306 765689 . + 0 ID=cds650;Parent=gene677;Dbxref=Genbank:WP_012104528.1;Name=WP_012104528.1;gbkey=CDS;product=flagellar export chaperone FliS;protein_id=WP_012104528.1;transl_table=11 NC_009708.1 RefSeq gene 765691 766017 . + . ID=gene678;Name=YPSIP31758_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04645;old_locus_tag=YpsIP31758_0657 NC_009708.1 Protein Homology CDS 765691 766017 . + 0 ID=cds651;Parent=gene678;Dbxref=Genbank:WP_012104529.1;Name=WP_012104529.1;gbkey=CDS;product=flagellar protein lafD;protein_id=WP_012104529.1;transl_table=11 NC_009708.1 RefSeq gene 766019 767116 . + . ID=gene679;Name=YPSIP31758_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04650;old_locus_tag=YpsIP31758_0658 NC_009708.1 Protein Homology CDS 766019 767116 . + 0 ID=cds652;Parent=gene679;Dbxref=Genbank:WP_012104530.1;Name=WP_012104530.1;gbkey=CDS;product=flagellar hook-length control protein;protein_id=WP_012104530.1;transl_table=11 NC_009708.1 RefSeq gene 767142 767612 . + . ID=gene680;Name=YPSIP31758_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04655;old_locus_tag=YpsIP31758_0659 NC_009708.1 Protein Homology CDS 767142 767612 . + 0 ID=cds653;Parent=gene680;Dbxref=Genbank:WP_012104531.1;Name=WP_012104531.1;gbkey=CDS;product=flagellar protein;protein_id=WP_012104531.1;transl_table=11 NC_009708.1 RefSeq gene 767618 768313 . + . ID=gene681;Name=YPSIP31758_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04660;old_locus_tag=YpsIP31758_0660 NC_009708.1 Protein Homology CDS 767618 768313 . + 0 ID=cds654;Parent=gene681;Dbxref=Genbank:WP_012104532.1;Name=WP_012104532.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;product=DNA-directed RNA polymerase sigma-70 factor;protein_id=WP_012104532.1;transl_table=11 NC_009708.1 RefSeq gene 768329 769195 . + . ID=gene682;Name=YPSIP31758_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04665;old_locus_tag=YpsIP31758_0661 NC_009708.1 Protein Homology CDS 768329 769195 . + 0 ID=cds655;Parent=gene682;Dbxref=Genbank:WP_012104533.1;Name=WP_012104533.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_012104533.1;transl_table=11 NC_009708.1 RefSeq gene 769195 770106 . + . ID=gene683;Name=YPSIP31758_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04670;old_locus_tag=YpsIP31758_0662 NC_009708.1 Protein Homology CDS 769195 770106 . + 0 ID=cds656;Parent=gene683;Dbxref=Genbank:WP_012104534.1;Name=WP_012104534.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104534.1;transl_table=11 NC_009708.1 RefSeq gene 770175 770365 . + . ID=gene684;Name=YPSIP31758_RS04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04675;pseudo=true NC_009708.1 Protein Homology CDS 770175 770365 . + 0 ID=cds657;Parent=gene684;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 770490 770752 . + . ID=gene685;Name=YPSIP31758_RS04680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04680;partial=true;pseudo=true;start_range=.,770490 NC_009708.1 Protein Homology CDS 770490 770752 . + 0 ID=cds658;Parent=gene685;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,770490;transl_table=11 NC_009708.1 RefSeq gene 770749 771204 . + . ID=gene686;Name=YPSIP31758_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04685;old_locus_tag=YpsIP31758_0664 NC_009708.1 Protein Homology CDS 770749 771204 . + 0 ID=cds659;Parent=gene686;Dbxref=Genbank:WP_012104535.1;Name=WP_012104535.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104535.1;transl_table=11 NC_009708.1 RefSeq gene 771302 771559 . + . ID=gene687;Name=YPSIP31758_RS04690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04690;pseudo=true NC_009708.1 Protein Homology CDS 771302 771559 . + 0 ID=cds660;Parent=gene687;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:771362..771364%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 771723 772190 . - . ID=gene688;Name=YPSIP31758_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04695;old_locus_tag=YpsIP31758_0665 NC_009708.1 Protein Homology CDS 771723 772190 . - 0 ID=cds661;Parent=gene688;Dbxref=Genbank:WP_012104536.1;Name=WP_012104536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104536.1;transl_table=11 NC_009708.1 RefSeq gene 772439 772741 . - . ID=gene689;Name=YPSIP31758_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04700 NC_009708.1 Protein Homology CDS 772439 772741 . - 0 ID=cds662;Parent=gene689;Dbxref=Genbank:WP_041175733.1;Name=WP_041175733.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175733.1;transl_table=11 NC_009708.1 RefSeq gene 773496 776063 . - . ID=gene690;Name=YPSIP31758_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04705;old_locus_tag=YpsIP31758_0666 NC_009708.1 Protein Homology CDS 773496 776063 . - 0 ID=cds663;Parent=gene690;Dbxref=Genbank:WP_012104537.1;Name=WP_012104537.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_012104537.1;transl_table=11 NC_009708.1 RefSeq gene 776518 777813 . + . ID=gene691;Name=YPSIP31758_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04710;old_locus_tag=YpsIP31758_0667 NC_009708.1 Protein Homology CDS 776518 777813 . + 0 ID=cds664;Parent=gene691;Dbxref=Genbank:WP_041175734.1;Name=WP_041175734.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_041175734.1;transl_table=11 NC_009708.1 RefSeq gene 777826 780945 . + . ID=gene692;Name=YPSIP31758_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04715;old_locus_tag=YpsIP31758_0668 NC_009708.1 Protein Homology CDS 777826 780945 . + 0 ID=cds665;Parent=gene692;Dbxref=Genbank:WP_012104540.1;Name=WP_012104540.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_012104540.1;transl_table=11 NC_009708.1 RefSeq gene 781073 781525 . - . ID=gene693;Name=YPSIP31758_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04720;old_locus_tag=YpsIP31758_0669 NC_009708.1 Protein Homology CDS 781073 781525 . - 0 ID=cds666;Parent=gene693;Dbxref=Genbank:WP_012104543.1;Name=WP_012104543.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104543.1;transl_table=11 NC_009708.1 RefSeq gene 781784 781891 . - . ID=gene694;Name=YPSIP31758_RS04725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04725;partial=true;pseudo=true;start_range=.,781784 NC_009708.1 Protein Homology CDS 781784 781891 . - 0 ID=cds667;Parent=gene694;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,781784;transl_table=11 NC_009708.1 RefSeq gene 782224 783714 . - . ID=gene695;Name=YPSIP31758_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04730;old_locus_tag=YpsIP31758_0671 NC_009708.1 Protein Homology CDS 782224 783714 . - 0 ID=cds668;Parent=gene695;Dbxref=Genbank:WP_012104544.1;Name=WP_012104544.1;gbkey=CDS;product=enterotoxin;protein_id=WP_012104544.1;transl_table=11 NC_009708.1 RefSeq gene 783989 784576 . + . ID=gene696;Name=YPSIP31758_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04735;old_locus_tag=YpsIP31758_0672 NC_009708.1 Protein Homology CDS 783989 784576 . + 0 ID=cds669;Parent=gene696;Dbxref=Genbank:WP_012104545.1;Name=WP_012104545.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104545.1;transl_table=11 NC_009708.1 RefSeq repeat_region 788623 794081 . + . ID=id89;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 794180 794672 . + . ID=id90;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 795016 795626 . + . ID=id91;gbkey=repeat_region NC_009708.1 RefSeq gene 795427 798558 . + . ID=gene697;Name=YPSIP31758_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22550 NC_009708.1 Protein Homology CDS 795427 798558 . + 0 ID=cds670;Parent=gene697;Dbxref=Genbank:WP_042659843.1;Name=WP_042659843.1;gbkey=CDS;product=transporter;protein_id=WP_042659843.1;transl_table=11 NC_009708.1 RefSeq gene 798823 799779 . - . ID=gene698;Name=YPSIP31758_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04745;old_locus_tag=YpsIP31758_0675 NC_009708.1 Protein Homology CDS 798823 799779 . - 0 ID=cds671;Parent=gene698;Dbxref=Genbank:WP_012104548.1;Name=WP_012104548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104548.1;transl_table=11 NC_009708.1 RefSeq gene 800106 800960 . - . ID=gene699;Name=YPSIP31758_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04750;old_locus_tag=YpsIP31758_0676 NC_009708.1 Protein Homology CDS 800106 800960 . - 0 ID=cds672;Parent=gene699;Dbxref=Genbank:WP_012104549.1;Name=WP_012104549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104549.1;transl_table=11 NC_009708.1 RefSeq gene 801187 803061 . - . ID=gene700;Name=YPSIP31758_RS04755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04755;pseudo=true NC_009708.1 Protein Homology CDS 801187 803061 . - 0 ID=cds673;Parent=gene700;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(801847..801849)%2Caa:Other),(pos:complement(801787..801789)%2Caa:Other),(pos:complement(801769..801771)%2Caa:Other),(pos:complement(801763..801765)%2Caa:Other),(pos:complement(801751..801753)%2Caa:Other);transl_table=11 NC_009708.1 RefSeq repeat_region 801706 801810 . + . ID=id92;gbkey=repeat_region NC_009708.1 RefSeq gene 803777 805333 . + . ID=gene701;Name=YPSIP31758_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04760;old_locus_tag=YpsIP31758_0678 NC_009708.1 Protein Homology CDS 803777 805333 . + 0 ID=cds674;Parent=gene701;Dbxref=Genbank:WP_012104550.1;Name=WP_012104550.1;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=WP_012104550.1;transl_table=11 NC_009708.1 RefSeq repeat_region 805338 805637 . + . ID=id93;gbkey=repeat_region NC_009708.1 RefSeq gene 805864 807096 . + . ID=gene702;Name=YPSIP31758_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04765;old_locus_tag=YpsIP31758_0680 NC_009708.1 Protein Homology CDS 805864 807096 . + 0 ID=cds675;Parent=gene702;Dbxref=Genbank:WP_002211633.1;Name=WP_002211633.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_002211633.1;transl_table=11 NC_009708.1 RefSeq gene 807480 809552 . + . ID=gene703;Name=YPSIP31758_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04770;old_locus_tag=YpsIP31758_0681 NC_009708.1 Protein Homology CDS 807480 809552 . + 0 ID=cds676;Parent=gene703;Dbxref=Genbank:WP_012104552.1;Name=WP_012104552.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_012104552.1;transl_table=11 NC_009708.1 RefSeq gene 809703 813039 . + . ID=gene704;Name=YPSIP31758_RS04775;end_range=813039,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04775;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 809703 813039 . + 0 ID=cds677;Parent=gene704;end_range=813039,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=peptide synthetase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 813124 819581 . + . ID=gene705;Name=YPSIP31758_RS04780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04780;pseudo=true NC_009708.1 Protein Homology CDS 813124 819581 . + 0 ID=cds678;Parent=gene705;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide synthetase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 819589 821277 . + . ID=gene706;Name=YPSIP31758_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04785 NC_009708.1 Protein Homology CDS 819589 821277 . + 0 ID=cds679;Parent=gene706;Dbxref=Genbank:WP_041175736.1;Name=WP_041175736.1;gbkey=CDS;product=siderophore biosysnthesis protein;protein_id=WP_041175736.1;transl_table=11 NC_009708.1 RefSeq gene 821290 826956 . + . ID=gene707;Name=YPSIP31758_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04790;old_locus_tag=YpsIP31758_0684 NC_009708.1 Protein Homology CDS 821290 826956 . + 0 ID=cds680;Parent=gene707;Dbxref=Genbank:WP_012104554.1;Name=WP_012104554.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_012104554.1;transl_table=11 NC_009708.1 RefSeq gene 826953 828023 . + . ID=gene708;Name=YPSIP31758_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04795;old_locus_tag=YpsIP31758_0685 NC_009708.1 Protein Homology CDS 826953 828023 . + 0 ID=cds681;Parent=gene708;Dbxref=Genbank:WP_012104555.1;Name=WP_012104555.1;gbkey=CDS;product=saccharopine dehydrogenase;protein_id=WP_012104555.1;transl_table=11 NC_009708.1 RefSeq gene 828020 829147 . + . ID=gene709;Name=YPSIP31758_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04800;old_locus_tag=YpsIP31758_0686 NC_009708.1 Protein Homology CDS 828020 829147 . + 0 ID=cds682;Parent=gene709;Dbxref=Genbank:WP_012104556.1;Name=WP_012104556.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_012104556.1;transl_table=11 NC_009708.1 RefSeq gene 829140 829904 . + . ID=gene710;Name=YPSIP31758_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04805;old_locus_tag=YpsIP31758_0687 NC_009708.1 Protein Homology CDS 829140 829904 . + 0 ID=cds683;Parent=gene710;Dbxref=Genbank:WP_012104557.1;Name=WP_012104557.1;gbkey=CDS;product=thioesterase;protein_id=WP_012104557.1;transl_table=11 NC_009708.1 RefSeq gene 829894 831198 . + . ID=gene711;Name=YPSIP31758_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04810;old_locus_tag=YpsIP31758_0688 NC_009708.1 Protein Homology CDS 829894 831198 . + 0 ID=cds684;Parent=gene711;Dbxref=Genbank:WP_012104558.1;Name=WP_012104558.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012104558.1;transl_table=11 NC_009708.1 RefSeq gene 831198 832970 . + . ID=gene712;Name=YPSIP31758_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04815;old_locus_tag=YpsIP31758_0689 NC_009708.1 Protein Homology CDS 831198 832970 . + 0 ID=cds685;Parent=gene712;Dbxref=Genbank:WP_012104559.1;Name=WP_012104559.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_012104559.1;transl_table=11 NC_009708.1 RefSeq gene 832963 834720 . + . ID=gene713;Name=YPSIP31758_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04820;old_locus_tag=YpsIP31758_0690 NC_009708.1 Protein Homology CDS 832963 834720 . + 0 ID=cds686;Parent=gene713;Dbxref=Genbank:WP_012104560.1;Name=WP_012104560.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_012104560.1;transl_table=11 NC_009708.1 RefSeq gene 835062 835937 . - . ID=gene714;Name=YPSIP31758_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04825;old_locus_tag=YpsIP31758_0691 NC_009708.1 Protein Homology CDS 835062 835937 . - 0 ID=cds687;Parent=gene714;Dbxref=Genbank:WP_002211395.1;Name=WP_002211395.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211395.1;transl_table=11 NC_009708.1 RefSeq gene 836373 836771 . - . ID=gene715;Name=YPSIP31758_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04830;old_locus_tag=YpsIP31758_0692 NC_009708.1 Protein Homology CDS 836373 836771 . - 0 ID=cds688;Parent=gene715;Dbxref=Genbank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11 NC_009708.1 RefSeq gene 838308 839651 . + . ID=gene716;Name=YPSIP31758_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04835;old_locus_tag=YpsIP31758_0693 NC_009708.1 Protein Homology CDS 838308 839651 . + 0 ID=cds689;Parent=gene716;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11 NC_009708.1 RefSeq gene 840677 844456 . + . ID=gene717;Name=YPSIP31758_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04840;old_locus_tag=YpsIP31758_0694 NC_009708.1 Protein Homology CDS 840677 844456 . + 0 ID=cds690;Parent=gene717;Dbxref=Genbank:WP_012104561.1;Name=WP_012104561.1;gbkey=CDS;product=autotransporter;protein_id=WP_012104561.1;transl_table=11 NC_009708.1 RefSeq repeat_region 842330 844506 . + . ID=id94;gbkey=repeat_region NC_009708.1 RefSeq gene 845108 848893 . + . ID=gene718;Name=YPSIP31758_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04845;old_locus_tag=YpsIP31758_0695 NC_009708.1 Protein Homology CDS 845108 848893 . + 0 ID=cds691;Parent=gene718;Dbxref=Genbank:WP_041175737.1;Name=WP_041175737.1;gbkey=CDS;product=autotransporter;protein_id=WP_041175737.1;transl_table=11 NC_009708.1 RefSeq repeat_region 846735 848943 . + . ID=id95;gbkey=repeat_region NC_009708.1 RefSeq gene 849479 851704 . + . ID=gene719;Name=YPSIP31758_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04850;old_locus_tag=YpsIP31758_0696 NC_009708.1 Protein Homology CDS 849479 851704 . + 0 ID=cds692;Parent=gene719;Dbxref=Genbank:WP_012104563.1;Name=WP_012104563.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_012104563.1;transl_table=11 NC_009708.1 RefSeq gene 851730 853049 . + . ID=gene720;Name=YPSIP31758_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04855;old_locus_tag=YpsIP31758_0697 NC_009708.1 Protein Homology CDS 851730 853049 . + 0 ID=cds693;Parent=gene720;Dbxref=Genbank:WP_012104564.1;Name=WP_012104564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104564.1;transl_table=11 NC_009708.1 RefSeq gene 853063 857214 . + . ID=gene721;Name=YPSIP31758_RS04860;end_range=857214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04860;old_locus_tag=YpsIP31758_0698;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 853063 857214 . + 0 ID=cds694;Parent=gene721;end_range=857214,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 856559 857177 . + . ID=id96;gbkey=repeat_region NC_009708.1 RefSeq gene 857561 857923 . + . ID=gene722;Name=YPSIP31758_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04865;old_locus_tag=YpsIP31758_0699 NC_009708.1 Protein Homology CDS 857561 857923 . + 0 ID=cds695;Parent=gene722;Dbxref=Genbank:WP_012104566.1;Name=WP_012104566.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104566.1;transl_table=11 NC_009708.1 RefSeq gene 858074 858712 . + . ID=gene723;Name=YPSIP31758_RS04870;end_range=858712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS04870;partial=true;pseudo=true;start_range=.,858074 NC_009708.1 Protein Homology CDS 858074 858712 . + 0 ID=cds696;Parent=gene723;end_range=858712,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,858074;transl_table=11 NC_009708.1 RefSeq repeat_region 858093 858711 . + . ID=id97;gbkey=repeat_region NC_009708.1 RefSeq gene 859027 859542 . + . ID=gene724;Name=YPSIP31758_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04875;old_locus_tag=YpsIP31758_0701 NC_009708.1 Protein Homology CDS 859027 859542 . + 0 ID=cds697;Parent=gene724;Dbxref=Genbank:WP_012104567.1;Name=WP_012104567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104567.1;transl_table=11 NC_009708.1 RefSeq gene 859673 860011 . + . ID=gene725;Name=YPSIP31758_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04880;old_locus_tag=YpsIP31758_0702 NC_009708.1 Protein Homology CDS 859673 860011 . + 0 ID=cds698;Parent=gene725;Dbxref=Genbank:WP_012104568.1;Name=WP_012104568.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104568.1;transl_table=11 NC_009708.1 RefSeq gene 860252 860776 . + . ID=gene726;Name=YPSIP31758_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04885;old_locus_tag=YpsIP31758_0703 NC_009708.1 Protein Homology CDS 860252 860776 . + 0 ID=cds699;Parent=gene726;Dbxref=Genbank:WP_012104569.1;Name=WP_012104569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104569.1;transl_table=11 NC_009708.1 RefSeq gene 861195 861437 . + . ID=gene727;Name=YPSIP31758_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04890 NC_009708.1 Protein Homology CDS 861195 861437 . + 0 ID=cds700;Parent=gene727;Dbxref=Genbank:WP_032466586.1;Name=WP_032466586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466586.1;transl_table=11 NC_009708.1 RefSeq gene 861982 862395 . + . ID=gene728;Name=YPSIP31758_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04895;old_locus_tag=YpsIP31758_0705 NC_009708.1 Protein Homology CDS 861982 862395 . + 0 ID=cds701;Parent=gene728;Dbxref=Genbank:WP_012104571.1;Name=WP_012104571.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104571.1;transl_table=11 NC_009708.1 RefSeq gene 862574 863953 . - . ID=gene729;Name=YPSIP31758_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04900;old_locus_tag=YpsIP31758_0706 NC_009708.1 Protein Homology CDS 862574 863953 . - 0 ID=cds702;Parent=gene729;Dbxref=Genbank:WP_011193006.1;Name=WP_011193006.1;gbkey=CDS;product=sodium/sulfate symporter;protein_id=WP_011193006.1;transl_table=11 NC_009708.1 RefSeq gene 864235 865254 . - . ID=gene730;Name=YPSIP31758_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04905;old_locus_tag=YpsIP31758_0707 NC_009708.1 Protein Homology CDS 864235 865254 . - 0 ID=cds703;Parent=gene730;Dbxref=Genbank:WP_012303625.1;Name=WP_012303625.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_012303625.1;transl_table=11 NC_009708.1 RefSeq gene 865548 866621 . + . ID=gene731;Name=YPSIP31758_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04910;old_locus_tag=YpsIP31758_0708 NC_009708.1 Protein Homology CDS 865548 866621 . + 0 ID=cds704;Parent=gene731;Dbxref=Genbank:WP_012104573.1;Name=WP_012104573.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104573.1;transl_table=11 NC_009708.1 RefSeq gene 866783 868207 . + . ID=gene732;Name=YPSIP31758_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04915;old_locus_tag=YpsIP31758_0709 NC_009708.1 Protein Homology CDS 866783 868207 . + 0 ID=cds705;Parent=gene732;Dbxref=Genbank:WP_002211645.1;Name=WP_002211645.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_002211645.1;transl_table=11 NC_009708.1 RefSeq gene 868514 870694 . - . ID=gene733;Name=YPSIP31758_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04920;old_locus_tag=YpsIP31758_0710 NC_009708.1 Protein Homology CDS 868514 870694 . - 0 ID=cds706;Parent=gene733;Dbxref=Genbank:WP_002211646.1;Name=WP_002211646.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002211646.1;transl_table=11 NC_009708.1 RefSeq gene 870766 872094 . - . ID=gene734;Name=YPSIP31758_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04925;old_locus_tag=YpsIP31758_0711 NC_009708.1 Protein Homology CDS 870766 872094 . - 0 ID=cds707;Parent=gene734;Dbxref=Genbank:WP_011193002.1;Name=WP_011193002.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_011193002.1;transl_table=11 NC_009708.1 RefSeq gene 872091 873839 . - . ID=gene735;Name=YPSIP31758_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04930;old_locus_tag=YpsIP31758_0712 NC_009708.1 Protein Homology CDS 872091 873839 . - 0 ID=cds708;Parent=gene735;Dbxref=Genbank:WP_012104576.1;Name=WP_012104576.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_012104576.1;transl_table=11 NC_009708.1 RefSeq gene 873836 874786 . - . ID=gene736;Name=YPSIP31758_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04935;old_locus_tag=YpsIP31758_0713 NC_009708.1 Protein Homology CDS 873836 874786 . - 0 ID=cds709;Parent=gene736;Dbxref=Genbank:WP_002211649.1;Name=WP_002211649.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_002211649.1;transl_table=11 NC_009708.1 RefSeq gene 874770 876542 . - . ID=gene737;Name=YPSIP31758_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04940;old_locus_tag=YpsIP31758_0714 NC_009708.1 Protein Homology CDS 874770 876542 . - 0 ID=cds710;Parent=gene737;Dbxref=Genbank:WP_011192999.1;Name=WP_011192999.1;gbkey=CDS;product=aerobactin synthase IucA;protein_id=WP_011192999.1;transl_table=11 NC_009708.1 RefSeq gene 876682 877905 . + . ID=gene738;Name=YPSIP31758_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04945;old_locus_tag=YpsIP31758_0715 NC_009708.1 Protein Homology CDS 876682 877905 . + 0 ID=cds711;Parent=gene738;Dbxref=Genbank:WP_012104577.1;Name=WP_012104577.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012104577.1;transl_table=11 NC_009708.1 RefSeq gene 878195 879028 . - . ID=gene739;Name=YPSIP31758_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04950;old_locus_tag=YpsIP31758_0716 NC_009708.1 Protein Homology CDS 878195 879028 . - 0 ID=cds712;Parent=gene739;Dbxref=Genbank:WP_012104578.1;Name=WP_012104578.1;gbkey=CDS;product=dioxygenase;protein_id=WP_012104578.1;transl_table=11 NC_009708.1 RefSeq gene 879419 880777 . - . ID=gene740;Name=YPSIP31758_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04955;old_locus_tag=YpsIP31758_0718 NC_009708.1 Protein Homology CDS 879419 880777 . - 0 ID=cds713;Parent=gene740;Dbxref=Genbank:WP_011192996.1;Name=WP_011192996.1;gbkey=CDS;product=peptidase;protein_id=WP_011192996.1;transl_table=11 NC_009708.1 RefSeq gene 881339 882082 . + . ID=gene741;Name=YPSIP31758_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04960;old_locus_tag=YpsIP31758_0720 NC_009708.1 Protein Homology CDS 881339 882082 . + 0 ID=cds714;Parent=gene741;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NC_009708.1 RefSeq gene 882063 882713 . - . ID=gene742;Name=YPSIP31758_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04965;old_locus_tag=YpsIP31758_0719 NC_009708.1 Protein Homology CDS 882063 882713 . - 0 ID=cds715;Parent=gene742;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NC_009708.1 RefSeq gene 883884 884534 . + . ID=gene743;Name=YPSIP31758_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04970;old_locus_tag=YpsIP31758_0721 NC_009708.1 Protein Homology CDS 883884 884534 . + 0 ID=cds716;Parent=gene743;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11 NC_009708.1 RefSeq gene 884985 885380 . + . ID=gene744;Name=YPSIP31758_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04975;old_locus_tag=YpsIP31758_0723 NC_009708.1 Protein Homology CDS 884985 885380 . + 0 ID=cds717;Parent=gene744;Dbxref=Genbank:WP_012104581.1;Name=WP_012104581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104581.1;transl_table=11 NC_009708.1 RefSeq gene 885448 885711 . + . ID=gene745;Name=YPSIP31758_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04980;old_locus_tag=YpsIP31758_0724 NC_009708.1 Protein Homology CDS 885448 885711 . + 0 ID=cds718;Parent=gene745;Dbxref=Genbank:WP_011192994.1;Name=WP_011192994.1;gbkey=CDS;product=transposase;protein_id=WP_011192994.1;transl_table=11 NC_009708.1 RefSeq gene 885868 886239 . + . ID=gene746;Name=YPSIP31758_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04985 NC_009708.1 Protein Homology CDS 885868 886239 . + 0 ID=cds719;Parent=gene746;Dbxref=Genbank:WP_012413951.1;Name=WP_012413951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413951.1;transl_table=11 NC_009708.1 RefSeq gene 886282 886437 . + . ID=gene747;Name=YPSIP31758_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04990 NC_009708.1 Protein Homology CDS 886282 886437 . + 0 ID=cds720;Parent=gene747;Dbxref=Genbank:WP_012303633.1;Name=WP_012303633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303633.1;transl_table=11 NC_009708.1 RefSeq repeat_region 887216 895993 . + . ID=id98;gbkey=repeat_region NC_009708.1 RefSeq gene 887643 888143 . + . ID=gene748;Name=YPSIP31758_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS04995;old_locus_tag=YpsIP31758_0726 NC_009708.1 Protein Homology CDS 887643 888143 . + 0 ID=cds721;Parent=gene748;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_009708.1 RefSeq gene 888186 889736 . + . ID=gene749;Name=YPSIP31758_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05000;old_locus_tag=YpsIP31758_0727 NC_009708.1 Protein Homology CDS 888186 889736 . + 0 ID=cds722;Parent=gene749;Dbxref=Genbank:WP_012104583.1;Name=WP_012104583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104583.1;transl_table=11 NC_009708.1 RefSeq gene 889748 891100 . + . ID=gene750;Name=YPSIP31758_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05005;old_locus_tag=YpsIP31758_0728 NC_009708.1 Protein Homology CDS 889748 891100 . + 0 ID=cds723;Parent=gene750;Dbxref=Genbank:WP_012104584.1;Name=WP_012104584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104584.1;transl_table=11 NC_009708.1 RefSeq gene 891097 891783 . + . ID=gene751;Name=YPSIP31758_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05010;old_locus_tag=YpsIP31758_0729 NC_009708.1 Protein Homology CDS 891097 891783 . + 0 ID=cds724;Parent=gene751;Dbxref=Genbank:WP_012104585.1;Name=WP_012104585.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104585.1;transl_table=11 NC_009708.1 RefSeq gene 891783 893519 . + . ID=gene752;Name=YPSIP31758_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05015;old_locus_tag=YpsIP31758_0730 NC_009708.1 Protein Homology CDS 891783 893519 . + 0 ID=cds725;Parent=gene752;Dbxref=Genbank:WP_012104586.1;Name=WP_012104586.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104586.1;transl_table=11 NC_009708.1 RefSeq gene 893523 894014 . + . ID=gene753;Name=YPSIP31758_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05020;old_locus_tag=YpsIP31758_0731 NC_009708.1 Protein Homology CDS 893523 894014 . + 0 ID=cds726;Parent=gene753;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_009708.1 RefSeq gene 894308 896956 . + . ID=gene754;Name=YPSIP31758_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05025;old_locus_tag=YpsIP31758_0732 NC_009708.1 Protein Homology CDS 894308 896956 . + 0 ID=cds727;Parent=gene754;Dbxref=Genbank:WP_012104587.1;Name=WP_012104587.1;gbkey=CDS;product=ATPase;protein_id=WP_012104587.1;transl_table=11 NC_009708.1 RefSeq repeat_region 896081 896634 . + . ID=id99;gbkey=repeat_region NC_009708.1 RefSeq gene 896953 899301 . + . ID=gene755;Name=YPSIP31758_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05030;old_locus_tag=YpsIP31758_0733 NC_009708.1 Protein Homology CDS 896953 899301 . + 0 ID=cds728;Parent=gene755;Dbxref=Genbank:WP_012104588.1;Name=WP_012104588.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012104588.1;transl_table=11 NC_009708.1 RefSeq repeat_region 899023 899217 . + . ID=id100;gbkey=repeat_region NC_009708.1 RefSeq gene 899316 901538 . + . ID=gene756;Name=YPSIP31758_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05035;old_locus_tag=YpsIP31758_0734 NC_009708.1 Protein Homology CDS 899316 901538 . + 0 ID=cds729;Parent=gene756;Dbxref=Genbank:WP_012104589.1;Name=WP_012104589.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_012104589.1;transl_table=11 NC_009708.1 RefSeq gene 901683 902021 . + . ID=gene757;Name=YPSIP31758_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05040 NC_009708.1 Protein Homology CDS 901683 902021 . + 0 ID=cds730;Parent=gene757;Dbxref=Genbank:WP_038823087.1;Name=WP_038823087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038823087.1;transl_table=11 NC_009708.1 RefSeq gene 902119 902313 . + . ID=gene758;Name=YPSIP31758_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05045 NC_009708.1 Protein Homology CDS 902119 902313 . + 0 ID=cds731;Parent=gene758;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NC_009708.1 RefSeq repeat_region 902281 905765 . + . ID=id101;gbkey=repeat_region NC_009708.1 RefSeq gene 902495 902617 . + . ID=gene759;Name=YPSIP31758_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05050 NC_009708.1 Protein Homology CDS 902495 902617 . + 0 ID=cds732;Parent=gene759;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NC_009708.1 RefSeq gene 902671 902913 . + . ID=gene760;Name=YPSIP31758_RS05055;end_range=902913,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05055;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 902671 902913 . + 0 ID=cds733;Parent=gene760;end_range=902913,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 903081 903302 . + . ID=gene761;Name=YPSIP31758_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05060 NC_009708.1 GeneMarkS+ CDS 903081 903302 . + 0 ID=cds734;Parent=gene761;Dbxref=Genbank:WP_041175739.1;Name=WP_041175739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175739.1;transl_table=11 NC_009708.1 RefSeq gene 903648 904283 . + . ID=gene762;Name=YPSIP31758_RS05065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05065;pseudo=true NC_009708.1 Protein Homology CDS 903648 904283 . + 0 ID=cds735;Parent=gene762;gbkey=CDS;product=type IV secretion protein Rhs;pseudo=true;transl_except=(pos:903750..903752%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 904299 906596 . + . ID=gene763;Name=YPSIP31758_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05070;old_locus_tag=YpsIP31758_0738 NC_009708.1 Protein Homology CDS 904299 906596 . + 0 ID=cds736;Parent=gene763;Dbxref=Genbank:WP_012104590.1;Name=WP_012104590.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104590.1;transl_table=11 NC_009708.1 RefSeq gene 906583 907350 . + . ID=gene764;Name=YPSIP31758_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05075;old_locus_tag=YpsIP31758_0739 NC_009708.1 Protein Homology CDS 906583 907350 . + 0 ID=cds737;Parent=gene764;Dbxref=Genbank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11 NC_009708.1 RefSeq repeat_region 907385 909345 . + . ID=id102;gbkey=repeat_region NC_009708.1 RefSeq gene 907599 907721 . + . ID=gene765;Name=YPSIP31758_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05080 NC_009708.1 Protein Homology CDS 907599 907721 . + 0 ID=cds738;Parent=gene765;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NC_009708.1 RefSeq gene 907775 908143 . + . ID=gene766;Name=YPSIP31758_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05085;old_locus_tag=YpsIP31758_0741 NC_009708.1 Protein Homology CDS 907775 908143 . + 0 ID=cds739;Parent=gene766;Dbxref=Genbank:WP_012104591.1;Name=WP_012104591.1;gbkey=CDS;product=transposase;protein_id=WP_012104591.1;transl_table=11 NC_009708.1 RefSeq gene 908752 909381 . + . ID=gene767;Name=YPSIP31758_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05090 NC_009708.1 Protein Homology CDS 908752 909381 . + 0 ID=cds740;Parent=gene767;Dbxref=Genbank:WP_041175740.1;Name=WP_041175740.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_041175740.1;transl_table=11 NC_009708.1 RefSeq repeat_region 909404 909988 . + . ID=id103;gbkey=repeat_region NC_009708.1 RefSeq gene 909405 909713 . + . ID=gene768;Name=YPSIP31758_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05095;old_locus_tag=YpsIP31758_0743 NC_009708.1 Protein Homology CDS 909405 909713 . + 0 ID=cds741;Parent=gene768;Dbxref=Genbank:WP_002228972.1;Name=WP_002228972.1;gbkey=CDS;product=integrase;protein_id=WP_002228972.1;transl_table=11 NC_009708.1 RefSeq gene 910172 910411 . - . ID=gene769;Name=YPSIP31758_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05100;old_locus_tag=YpsIP31758_0744 NC_009708.1 Protein Homology CDS 910172 910411 . - 0 ID=cds742;Parent=gene769;Dbxref=Genbank:WP_004722488.1;Name=WP_004722488.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_004722488.1;transl_table=11 NC_009708.1 RefSeq gene 910446 910769 . - . ID=gene770;Name=YPSIP31758_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05105;old_locus_tag=YpsIP31758_0745 NC_009708.1 Protein Homology CDS 910446 910769 . - 0 ID=cds743;Parent=gene770;Dbxref=Genbank:WP_012104593.1;Name=WP_012104593.1;gbkey=CDS;product=RelE toxin protein;protein_id=WP_012104593.1;transl_table=11 NC_009708.1 RefSeq gene 910969 911835 . - . ID=gene771;Name=YPSIP31758_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05110;old_locus_tag=YpsIP31758_0746 NC_009708.1 Protein Homology CDS 910969 911835 . - 0 ID=cds744;Parent=gene771;Dbxref=Genbank:WP_012104594.1;Name=WP_012104594.1;gbkey=CDS;product=restriction methylase;protein_id=WP_012104594.1;transl_table=11 NC_009708.1 RefSeq gene 911931 912251 . - . ID=gene772;Name=YPSIP31758_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05115;old_locus_tag=YpsIP31758_0747 NC_009708.1 Protein Homology CDS 911931 912251 . - 0 ID=cds745;Parent=gene772;Dbxref=Genbank:WP_012104595.1;Name=WP_012104595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104595.1;transl_table=11 NC_009708.1 RefSeq gene 912263 912619 . - . ID=gene773;Name=YPSIP31758_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05120;old_locus_tag=YpsIP31758_0748 NC_009708.1 Protein Homology CDS 912263 912619 . - 0 ID=cds746;Parent=gene773;Dbxref=Genbank:WP_012104596.1;Name=WP_012104596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104596.1;transl_table=11 NC_009708.1 RefSeq gene 912675 913007 . - . ID=gene774;Name=YPSIP31758_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05125;old_locus_tag=YpsIP31758_0749 NC_009708.1 Protein Homology CDS 912675 913007 . - 0 ID=cds747;Parent=gene774;Dbxref=Genbank:WP_012104597.1;Name=WP_012104597.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104597.1;transl_table=11 NC_009708.1 RefSeq gene 913001 913474 . - . ID=gene775;Name=YPSIP31758_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05130;old_locus_tag=YpsIP31758_0750 NC_009708.1 Protein Homology CDS 913001 913474 . - 0 ID=cds748;Parent=gene775;Dbxref=Genbank:WP_041175841.1;Name=WP_041175841.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_041175841.1;transl_table=11 NC_009708.1 RefSeq gene 913506 913937 . - . ID=gene776;Name=YPSIP31758_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05135;old_locus_tag=YpsIP31758_0752 NC_009708.1 Protein Homology CDS 913506 913937 . - 0 ID=cds749;Parent=gene776;Dbxref=Genbank:WP_012104600.1;Name=WP_012104600.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_012104600.1;transl_table=11 NC_009708.1 RefSeq gene 914065 914325 . - . ID=gene777;Name=YPSIP31758_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05140;old_locus_tag=YpsIP31758_0753 NC_009708.1 Protein Homology CDS 914065 914325 . - 0 ID=cds750;Parent=gene777;Dbxref=Genbank:WP_012104601.1;Name=WP_012104601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104601.1;transl_table=11 NC_009708.1 RefSeq gene 914325 915146 . - . ID=gene778;Name=YPSIP31758_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05145;old_locus_tag=YpsIP31758_0754 NC_009708.1 Protein Homology CDS 914325 915146 . - 0 ID=cds751;Parent=gene778;Dbxref=Genbank:WP_012104602.1;Name=WP_012104602.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104602.1;transl_table=11 NC_009708.1 RefSeq gene 915243 915686 . - . ID=gene779;Name=YPSIP31758_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05150;old_locus_tag=YpsIP31758_0755 NC_009708.1 Protein Homology CDS 915243 915686 . - 0 ID=cds752;Parent=gene779;Dbxref=Genbank:WP_041175842.1;Name=WP_041175842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175842.1;transl_table=11 NC_009708.1 RefSeq gene 915814 916350 . - . ID=gene780;Name=YPSIP31758_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05155;old_locus_tag=YpsIP31758_0756 NC_009708.1 Protein Homology CDS 915814 916350 . - 0 ID=cds753;Parent=gene780;Dbxref=Genbank:WP_012104605.1;Name=WP_012104605.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104605.1;transl_table=11 NC_009708.1 RefSeq gene 916473 917093 . - . ID=gene781;Name=YPSIP31758_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05160;old_locus_tag=YpsIP31758_0757 NC_009708.1 Protein Homology CDS 916473 917093 . - 0 ID=cds754;Parent=gene781;Dbxref=Genbank:WP_012104606.1;Name=WP_012104606.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104606.1;transl_table=11 NC_009708.1 RefSeq gene 917099 917800 . - . ID=gene782;Name=YPSIP31758_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05165;old_locus_tag=YpsIP31758_0758 NC_009708.1 Protein Homology CDS 917099 917800 . - 0 ID=cds755;Parent=gene782;Dbxref=Genbank:WP_012104607.1;Name=WP_012104607.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104607.1;transl_table=11 NC_009708.1 RefSeq gene 918013 918888 . - . ID=gene783;Name=YPSIP31758_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05170;old_locus_tag=YpsIP31758_0759 NC_009708.1 Protein Homology CDS 918013 918888 . - 0 ID=cds756;Parent=gene783;Dbxref=Genbank:WP_012104608.1;Name=WP_012104608.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104608.1;transl_table=11 NC_009708.1 RefSeq gene 918996 919883 . - . ID=gene784;Name=YPSIP31758_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05175;old_locus_tag=YpsIP31758_0760 NC_009708.1 Protein Homology CDS 918996 919883 . - 0 ID=cds757;Parent=gene784;Dbxref=Genbank:WP_012104609.1;Name=WP_012104609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104609.1;transl_table=11 NC_009708.1 RefSeq gene 920298 920492 . - . ID=gene785;Name=YPSIP31758_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05180 NC_009708.1 GeneMarkS+ CDS 920298 920492 . - 0 ID=cds758;Parent=gene785;Dbxref=Genbank:WP_041175741.1;Name=WP_041175741.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175741.1;transl_table=11 NC_009708.1 RefSeq gene 921173 921802 . + . ID=gene786;Name=YPSIP31758_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05185;old_locus_tag=YpsIP31758_0762 NC_009708.1 Protein Homology CDS 921173 921802 . + 0 ID=cds759;Parent=gene786;Dbxref=Genbank:WP_012104611.1;Name=WP_012104611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104611.1;transl_table=11 NC_009708.1 RefSeq gene 921909 922118 . + . ID=gene787;Name=YPSIP31758_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05190;old_locus_tag=YpsIP31758_0763 NC_009708.1 Protein Homology CDS 921909 922118 . + 0 ID=cds760;Parent=gene787;Dbxref=Genbank:WP_012104612.1;Name=WP_012104612.1;gbkey=CDS;product=Rha family transcriptional regulator;protein_id=WP_012104612.1;transl_table=11 NC_009708.1 RefSeq gene 922218 922744 . + . ID=gene788;Name=YPSIP31758_RS05195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05195;pseudo=true NC_009708.1 Protein Homology CDS 922218 922744 . + 0 ID=cds761;Parent=gene788;exception=annotated by transcript or proteomic data;gbkey=CDS;product=secretoglobin family protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 923029 923625 . + . ID=gene789;Name=YPSIP31758_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05200;old_locus_tag=YpsIP31758_0767 NC_009708.1 Protein Homology CDS 923029 923625 . + 0 ID=cds762;Parent=gene789;Dbxref=Genbank:WP_012104616.1;Name=WP_012104616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104616.1;transl_table=11 NC_009708.1 RefSeq gene 924053 924703 . + . ID=gene790;Name=YPSIP31758_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05205;old_locus_tag=YpsIP31758_0768 NC_009708.1 Protein Homology CDS 924053 924703 . + 0 ID=cds763;Parent=gene790;Dbxref=Genbank:WP_041175843.1;Name=WP_041175843.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175843.1;transl_table=11 NC_009708.1 RefSeq gene 924799 925350 . - . ID=gene791;Name=YPSIP31758_RS05210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05210;old_locus_tag=YpsIP31758_0769;partial=true;pseudo=true;start_range=.,924799 NC_009708.1 Protein Homology CDS 924799 925350 . - 0 ID=cds764;Parent=gene791;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,924799;transl_table=11 NC_009708.1 RefSeq gene 926036 927595 . + . ID=gene792;Name=YPSIP31758_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05215;old_locus_tag=YpsIP31758_0770 NC_009708.1 Protein Homology CDS 926036 927595 . + 0 ID=cds765;Parent=gene792;Dbxref=Genbank:WP_012104619.1;Name=WP_012104619.1;gbkey=CDS;product=recombinase;protein_id=WP_012104619.1;transl_table=11 NC_009708.1 RefSeq gene 927592 928482 . + . ID=gene793;Name=YPSIP31758_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05220;old_locus_tag=YpsIP31758_0771 NC_009708.1 Protein Homology CDS 927592 928482 . + 0 ID=cds766;Parent=gene793;Dbxref=Genbank:WP_012104620.1;Name=WP_012104620.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_012104620.1;transl_table=11 NC_009708.1 RefSeq gene 928475 929359 . + . ID=gene794;Name=YPSIP31758_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05225;old_locus_tag=YpsIP31758_0772 NC_009708.1 Protein Homology CDS 928475 929359 . + 0 ID=cds767;Parent=gene794;Dbxref=Genbank:WP_012104621.1;Name=WP_012104621.1;gbkey=CDS;product=RepB plasmid partitioning protein;protein_id=WP_012104621.1;transl_table=11 NC_009708.1 RefSeq gene 929701 930088 . - . ID=gene795;Name=YPSIP31758_RS05230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05230;pseudo=true NC_009708.1 Protein Homology CDS 929701 930088 . - 0 ID=cds768;Parent=gene795;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 930649 931306 . - . ID=gene796;Name=YPSIP31758_RS05235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05235;pseudo=true NC_009708.1 Protein Homology CDS 930649 931306 . - 0 ID=cds769;Parent=gene796;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 931614 931850 . - . ID=gene797;Name=YPSIP31758_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05240;old_locus_tag=YpsIP31758_0776 NC_009708.1 Protein Homology CDS 931614 931850 . - 0 ID=cds770;Parent=gene797;Dbxref=Genbank:WP_049756381.1;Name=WP_049756381.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756381.1;transl_table=11 NC_009708.1 RefSeq gene 932854 933354 . + . ID=gene798;Name=YPSIP31758_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05245;old_locus_tag=YpsIP31758_0777 NC_009708.1 Protein Homology CDS 932854 933354 . + 0 ID=cds771;Parent=gene798;Dbxref=Genbank:WP_012104625.1;Name=WP_012104625.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104625.1;transl_table=11 NC_009708.1 RefSeq gene 933405 934952 . + . ID=gene799;Name=YPSIP31758_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05250;old_locus_tag=YpsIP31758_0778 NC_009708.1 Protein Homology CDS 933405 934952 . + 0 ID=cds772;Parent=gene799;Dbxref=Genbank:WP_041175846.1;Name=WP_041175846.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_041175846.1;transl_table=11 NC_009708.1 RefSeq gene 935078 936430 . + . ID=gene800;Name=YPSIP31758_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05255;old_locus_tag=YpsIP31758_0779 NC_009708.1 Protein Homology CDS 935078 936430 . + 0 ID=cds773;Parent=gene800;Dbxref=Genbank:WP_012104627.1;Name=WP_012104627.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104627.1;transl_table=11 NC_009708.1 RefSeq gene 936427 937113 . + . ID=gene801;Name=YPSIP31758_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05260;old_locus_tag=YpsIP31758_0780 NC_009708.1 Protein Homology CDS 936427 937113 . + 0 ID=cds774;Parent=gene801;Dbxref=Genbank:WP_012104628.1;Name=WP_012104628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104628.1;transl_table=11 NC_009708.1 RefSeq gene 937113 938834 . + . ID=gene802;Name=YPSIP31758_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05265;old_locus_tag=YpsIP31758_0781 NC_009708.1 Protein Homology CDS 937113 938834 . + 0 ID=cds775;Parent=gene802;Dbxref=Genbank:WP_012104629.1;Name=WP_012104629.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104629.1;transl_table=11 NC_009708.1 RefSeq gene 938848 939339 . + . ID=gene803;Name=YPSIP31758_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05270;old_locus_tag=YpsIP31758_0782 NC_009708.1 Protein Homology CDS 938848 939339 . + 0 ID=cds776;Parent=gene803;Dbxref=Genbank:WP_004877984.1;Name=WP_004877984.1;gbkey=CDS;product=type VI secretion system effector%2C Hcp1 family;protein_id=WP_004877984.1;transl_table=11 NC_009708.1 RefSeq gene 939886 942534 . + . ID=gene804;Name=YPSIP31758_RS05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05275;pseudo=true NC_009708.1 Protein Homology CDS 939886 942534 . + 0 ID=cds777;Parent=gene804;gbkey=CDS;product=ATPase;pseudo=true;transl_except=(pos:941383..941385%2Caa:Other);transl_table=11 NC_009708.1 RefSeq repeat_region 942527 944795 . + . ID=id104;gbkey=repeat_region NC_009708.1 RefSeq gene 942531 945029 . + . ID=gene805;Name=YPSIP31758_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05280;old_locus_tag=YpsIP31758_0785 NC_009708.1 Protein Homology CDS 942531 945029 . + 0 ID=cds778;Parent=gene805;Dbxref=Genbank:WP_012104631.1;Name=WP_012104631.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012104631.1;transl_table=11 NC_009708.1 RefSeq gene 945147 946418 . + . ID=gene806;Name=YPSIP31758_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05285;old_locus_tag=YpsIP31758_0786 NC_009708.1 Protein Homology CDS 945147 946418 . + 0 ID=cds779;Parent=gene806;Dbxref=Genbank:WP_012104632.1;Name=WP_012104632.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104632.1;transl_table=11 NC_009708.1 RefSeq gene 946422 946817 . + . ID=gene807;Name=YPSIP31758_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05290;old_locus_tag=YpsIP31758_0787 NC_009708.1 Protein Homology CDS 946422 946817 . + 0 ID=cds780;Parent=gene807;Dbxref=Genbank:WP_032467135.1;Name=WP_032467135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467135.1;transl_table=11 NC_009708.1 RefSeq repeat_region 947128 949353 . + . ID=id105;gbkey=repeat_region NC_009708.1 RefSeq gene 947132 949834 . + . ID=gene808;Name=YPSIP31758_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05295;old_locus_tag=YpsIP31758_0788 NC_009708.1 Protein Homology CDS 947132 949834 . + 0 ID=cds781;Parent=gene808;Dbxref=Genbank:WP_012104633.1;Name=WP_012104633.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012104633.1;transl_table=11 NC_009708.1 RefSeq gene 949837 950253 . + . ID=gene809;Name=YPSIP31758_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05300;old_locus_tag=YpsIP31758_0789 NC_009708.1 Protein Homology CDS 949837 950253 . + 0 ID=cds782;Parent=gene809;Dbxref=Genbank:WP_011192084.1;Name=WP_011192084.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192084.1;transl_table=11 NC_009708.1 RefSeq gene 950262 952009 . + . ID=gene810;Name=YPSIP31758_RS05305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05305;pseudo=true NC_009708.1 Protein Homology CDS 950262 952009 . + 0 ID=cds783;Parent=gene810;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptidoglycan-binding protein LysM;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 952014 952532 . + . ID=gene811;Name=YPSIP31758_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05310;old_locus_tag=YpsIP31758_0792 NC_009708.1 Protein Homology CDS 952014 952532 . + 0 ID=cds784;Parent=gene811;Dbxref=Genbank:WP_012104636.1;Name=WP_012104636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104636.1;transl_table=11 NC_009708.1 RefSeq gene 953312 954544 . + . ID=gene812;Name=YPSIP31758_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05315;old_locus_tag=YpsIP31758_0794 NC_009708.1 Protein Homology CDS 953312 954544 . + 0 ID=cds785;Parent=gene812;Dbxref=Genbank:WP_012104638.1;Name=WP_012104638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104638.1;transl_table=11 NC_009708.1 RefSeq gene 954541 957963 . + . ID=gene813;Name=YPSIP31758_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05320;old_locus_tag=YpsIP31758_0795 NC_009708.1 Protein Homology CDS 954541 957963 . + 0 ID=cds786;Parent=gene813;Dbxref=Genbank:WP_012104639.1;Name=WP_012104639.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_012104639.1;transl_table=11 NC_009708.1 RefSeq gene 958005 959609 . + . ID=gene814;Name=YPSIP31758_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05325;old_locus_tag=YpsIP31758_0796 NC_009708.1 Protein Homology CDS 958005 959609 . + 0 ID=cds787;Parent=gene814;Dbxref=Genbank:WP_012104640.1;Name=WP_012104640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104640.1;transl_table=11 NC_009708.1 RefSeq gene 959627 960685 . + . ID=gene815;Name=YPSIP31758_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05330;old_locus_tag=YpsIP31758_0797 NC_009708.1 Protein Homology CDS 959627 960685 . + 0 ID=cds788;Parent=gene815;Dbxref=Genbank:WP_012104641.1;Name=WP_012104641.1;gbkey=CDS;product=PAAR domain-containing protein;protein_id=WP_012104641.1;transl_table=11 NC_009708.1 RefSeq gene 960700 961155 . + . ID=gene816;Name=YPSIP31758_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05335;old_locus_tag=YpsIP31758_0798 NC_009708.1 Protein Homology CDS 960700 961155 . + 0 ID=cds789;Parent=gene816;Dbxref=Genbank:WP_002211939.1;Name=WP_002211939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211939.1;transl_table=11 NC_009708.1 RefSeq gene 961400 963163 . + . ID=gene817;Name=YPSIP31758_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05340;old_locus_tag=YpsIP31758_0800 NC_009708.1 Protein Homology CDS 961400 963163 . + 0 ID=cds790;Parent=gene817;Dbxref=Genbank:WP_012104643.1;Name=WP_012104643.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_012104643.1;transl_table=11 NC_009708.1 RefSeq gene 963127 964212 . + . ID=gene818;Name=YPSIP31758_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05345;old_locus_tag=YpsIP31758_0801 NC_009708.1 Protein Homology CDS 963127 964212 . + 0 ID=cds791;Parent=gene818;Dbxref=Genbank:WP_012104644.1;Name=WP_012104644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104644.1;transl_table=11 NC_009708.1 RefSeq gene 964187 964768 . + . ID=gene819;Name=YPSIP31758_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05350;old_locus_tag=YpsIP31758_0802 NC_009708.1 Protein Homology CDS 964187 964768 . + 0 ID=cds792;Parent=gene819;Dbxref=Genbank:WP_012104645.1;Name=WP_012104645.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_012104645.1;transl_table=11 NC_009708.1 RefSeq gene 964768 965217 . + . ID=gene820;Name=YPSIP31758_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05355;old_locus_tag=YpsIP31758_0803 NC_009708.1 Protein Homology CDS 964768 965217 . + 0 ID=cds793;Parent=gene820;Dbxref=Genbank:WP_012104646.1;Name=WP_012104646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104646.1;transl_table=11 NC_009708.1 RefSeq gene 965286 965702 . + . ID=gene821;Name=YPSIP31758_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22555 NC_009708.1 Protein Homology CDS 965286 965702 . + 0 ID=cds794;Parent=gene821;Dbxref=Genbank:WP_049756382.1;Name=WP_049756382.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756382.1;transl_table=11 NC_009708.1 RefSeq gene 965818 967215 . + . ID=gene822;Name=YPSIP31758_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05365;old_locus_tag=YpsIP31758_0805 NC_009708.1 Protein Homology CDS 965818 967215 . + 0 ID=cds795;Parent=gene822;Dbxref=Genbank:WP_012104648.1;Name=WP_012104648.1;gbkey=CDS;product=type VI secretion protein ImpA;protein_id=WP_012104648.1;transl_table=11 NC_009708.1 RefSeq gene 967310 967942 . + . ID=gene823;Name=YPSIP31758_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05370;old_locus_tag=YpsIP31758_0806 NC_009708.1 Protein Homology CDS 967310 967942 . + 0 ID=cds796;Parent=gene823;Dbxref=Genbank:WP_012104649.1;Name=WP_012104649.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104649.1;transl_table=11 NC_009708.1 RefSeq gene 968006 969856 . + . ID=gene824;Name=YPSIP31758_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05375;old_locus_tag=YpsIP31758_0807 NC_009708.1 Protein Homology CDS 968006 969856 . + 0 ID=cds797;Parent=gene824;Dbxref=Genbank:WP_012104650.1;Name=WP_012104650.1;gbkey=CDS;product=DNA helicase II;protein_id=WP_012104650.1;transl_table=11 NC_009708.1 RefSeq gene 970166 975733 . - . ID=gene825;Name=YPSIP31758_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05380;old_locus_tag=YpsIP31758_0808 NC_009708.1 Protein Homology CDS 970166 975733 . - 0 ID=cds798;Parent=gene825;Dbxref=Genbank:WP_041175742.1;Name=WP_041175742.1;gbkey=CDS;product=helicase;protein_id=WP_041175742.1;transl_table=11 NC_009708.1 RefSeq gene 976127 977386 . - . ID=gene826;Name=YPSIP31758_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05385;old_locus_tag=YpsIP31758_0809 NC_009708.1 Protein Homology CDS 976127 977386 . - 0 ID=cds799;Parent=gene826;Dbxref=Genbank:WP_012104652.1;Name=WP_012104652.1;gbkey=CDS;product=integrase;protein_id=WP_012104652.1;transl_table=11 NC_009708.1 RefSeq gene 977583 977658 . - . ID=gene827;Name=YPSIP31758_RS05390;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS05390;old_locus_tag=YpsIP31758_4210 NC_009708.1 tRNAscan-SE tRNA 977583 977658 . - . ID=rna27;Parent=gene827;anticodon=(pos:complement(977623..977625));gbkey=tRNA;product=tRNA-Phe NC_009708.1 tRNAscan-SE exon 977583 977658 . - . ID=id106;Parent=rna27;anticodon=(pos:complement(977623..977625));gbkey=tRNA;product=tRNA-Phe NC_009708.1 RefSeq gene 978327 980489 . + . ID=gene828;Name=YPSIP31758_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05395;old_locus_tag=YpsIP31758_0811 NC_009708.1 Protein Homology CDS 978327 980489 . + 0 ID=cds800;Parent=gene828;Dbxref=Genbank:WP_012104654.1;Name=WP_012104654.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_012104654.1;transl_table=11 NC_009708.1 RefSeq gene 981070 982029 . + . ID=gene829;Name=YPSIP31758_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05400;old_locus_tag=YpsIP31758_0812 NC_009708.1 Protein Homology CDS 981070 982029 . + 0 ID=cds801;Parent=gene829;Dbxref=Genbank:WP_012104655.1;Name=WP_012104655.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012104655.1;transl_table=11 NC_009708.1 RefSeq gene 982075 983574 . + . ID=gene830;Name=YPSIP31758_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05405;old_locus_tag=YpsIP31758_0813 NC_009708.1 Protein Homology CDS 982075 983574 . + 0 ID=cds802;Parent=gene830;Dbxref=Genbank:WP_012104656.1;Name=WP_012104656.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_012104656.1;transl_table=11 NC_009708.1 RefSeq gene 983655 984590 . + . ID=gene831;Name=YPSIP31758_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05410;old_locus_tag=YpsIP31758_0814 NC_009708.1 Protein Homology CDS 983655 984590 . + 0 ID=cds803;Parent=gene831;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11 NC_009708.1 RefSeq repeat_region 984644 984776 . + . ID=id107;gbkey=repeat_region NC_009708.1 RefSeq gene 984781 986814 . - . ID=gene832;Name=YPSIP31758_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05415;old_locus_tag=YpsIP31758_0815 NC_009708.1 Protein Homology CDS 984781 986814 . - 0 ID=cds804;Parent=gene832;Dbxref=Genbank:WP_041175847.1;Name=WP_041175847.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_041175847.1;transl_table=11 NC_009708.1 RefSeq gene 986918 988018 . - . ID=gene833;Name=YPSIP31758_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05420;old_locus_tag=YpsIP31758_0816 NC_009708.1 Protein Homology CDS 986918 988018 . - 0 ID=cds805;Parent=gene833;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NC_009708.1 RefSeq gene 988318 989394 . - . ID=gene834;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05425;old_locus_tag=YpsIP31758_0817 NC_009708.1 Protein Homology CDS 988318 989394 . - 0 ID=cds806;Parent=gene834;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11 NC_009708.1 RefSeq repeat_region 989434 989542 . + . ID=id108;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 989558 989666 . + . ID=id109;gbkey=repeat_region NC_009708.1 RefSeq gene 989701 989973 . - . ID=gene835;Name=YPSIP31758_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05430;old_locus_tag=YpsIP31758_0818 NC_009708.1 Protein Homology CDS 989701 989973 . - 0 ID=cds807;Parent=gene835;Dbxref=Genbank:WP_002230648.1;Name=WP_002230648.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002230648.1;transl_table=11 NC_009708.1 RefSeq gene 990151 991266 . - . ID=gene836;Name=YPSIP31758_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05435;old_locus_tag=YpsIP31758_0819 NC_009708.1 Protein Homology CDS 990151 991266 . - 0 ID=cds808;Parent=gene836;Dbxref=Genbank:WP_012104658.1;Name=WP_012104658.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_012104658.1;transl_table=11 NC_009708.1 RefSeq gene 991679 992398 . + . ID=gene837;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=YPSIP31758_RS05440;old_locus_tag=YpsIP31758_0820 NC_009708.1 Protein Homology CDS 991679 992398 . + 0 ID=cds809;Parent=gene837;Dbxref=Genbank:WP_012104659.1;Name=WP_012104659.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_012104659.1;transl_table=11 NC_009708.1 RefSeq gene 992398 992724 . + . ID=gene838;Name=YPSIP31758_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05445;old_locus_tag=YpsIP31758_0821 NC_009708.1 Protein Homology CDS 992398 992724 . + 0 ID=cds810;Parent=gene838;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11 NC_009708.1 RefSeq gene 992835 993761 . + . ID=gene839;Name=YPSIP31758_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05450;old_locus_tag=YpsIP31758_0822 NC_009708.1 Protein Homology CDS 992835 993761 . + 0 ID=cds811;Parent=gene839;Dbxref=Genbank:WP_012104660.1;Name=WP_012104660.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_012104660.1;transl_table=11 NC_009708.1 RefSeq gene 993873 994607 . + . ID=gene840;Name=YPSIP31758_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05455;old_locus_tag=YpsIP31758_0823 NC_009708.1 Protein Homology CDS 993873 994607 . + 0 ID=cds812;Parent=gene840;Dbxref=Genbank:WP_012104662.1;Name=WP_012104662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104662.1;transl_table=11 NC_009708.1 RefSeq gene 995114 1004446 . + . ID=gene841;Name=YPSIP31758_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05460;old_locus_tag=YpsIP31758_0824 NC_009708.1 Protein Homology CDS 995114 1004446 . + 0 ID=cds813;Parent=gene841;Dbxref=Genbank:WP_041175743.1;Name=WP_041175743.1;gbkey=CDS;product=pore forming RTX toxin family protein;protein_id=WP_041175743.1;transl_table=11 NC_009708.1 RefSeq gene 1004615 1005745 . - . ID=gene842;Name=YPSIP31758_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05465;old_locus_tag=YpsIP31758_0825 NC_009708.1 Protein Homology CDS 1004615 1005745 . - 0 ID=cds814;Parent=gene842;Dbxref=Genbank:WP_002209987.1;Name=WP_002209987.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002209987.1;transl_table=11 NC_009708.1 RefSeq gene 1005738 1006331 . - . ID=gene843;Name=YPSIP31758_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05470;old_locus_tag=YpsIP31758_0826 NC_009708.1 Protein Homology CDS 1005738 1006331 . - 0 ID=cds815;Parent=gene843;Dbxref=Genbank:WP_011192977.1;Name=WP_011192977.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_011192977.1;transl_table=11 NC_009708.1 RefSeq gene 1006431 1006721 . - . ID=gene844;Name=YPSIP31758_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05475;old_locus_tag=YpsIP31758_0827 NC_009708.1 Protein Homology CDS 1006431 1006721 . - 0 ID=cds816;Parent=gene844;Dbxref=Genbank:WP_011192976.1;Name=WP_011192976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192976.1;transl_table=11 NC_009708.1 RefSeq gene 1006718 1007272 . - . ID=gene845;Name=YPSIP31758_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05480;old_locus_tag=YpsIP31758_0828 NC_009708.1 Protein Homology CDS 1006718 1007272 . - 0 ID=cds817;Parent=gene845;Dbxref=Genbank:WP_011192975.1;Name=WP_011192975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192975.1;transl_table=11 NC_009708.1 RefSeq gene 1007560 1008381 . - . ID=gene846;Name=YPSIP31758_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05485;old_locus_tag=YpsIP31758_0829 NC_009708.1 Protein Homology CDS 1007560 1008381 . - 0 ID=cds818;Parent=gene846;Dbxref=Genbank:WP_012104665.1;Name=WP_012104665.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_012104665.1;transl_table=11 NC_009708.1 RefSeq gene 1008514 1009212 . - . ID=gene847;Name=YPSIP31758_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05490;old_locus_tag=YpsIP31758_0830 NC_009708.1 Protein Homology CDS 1008514 1009212 . - 0 ID=cds819;Parent=gene847;Dbxref=Genbank:WP_012104666.1;Name=WP_012104666.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_012104666.1;transl_table=11 NC_009708.1 RefSeq gene 1009232 1010356 . + . ID=gene848;Name=YPSIP31758_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05495;old_locus_tag=YpsIP31758_0831 NC_009708.1 Protein Homology CDS 1009232 1010356 . + 0 ID=cds820;Parent=gene848;Dbxref=Genbank:WP_012104667.1;Name=WP_012104667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104667.1;transl_table=11 NC_009708.1 RefSeq gene 1010465 1011580 . - . ID=gene849;Name=YPSIP31758_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05500;old_locus_tag=YpsIP31758_0832 NC_009708.1 Protein Homology CDS 1010465 1011580 . - 0 ID=cds821;Parent=gene849;Dbxref=Genbank:WP_002209980.1;Name=WP_002209980.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11 NC_009708.1 RefSeq gene 1011584 1012468 . - . ID=gene850;Name=YPSIP31758_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05505;old_locus_tag=YpsIP31758_0833 NC_009708.1 Protein Homology CDS 1011584 1012468 . - 0 ID=cds822;Parent=gene850;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NC_009708.1 RefSeq gene 1012648 1013070 . - . ID=gene851;Name=YPSIP31758_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05510;old_locus_tag=YpsIP31758_0834 NC_009708.1 Protein Homology CDS 1012648 1013070 . - 0 ID=cds823;Parent=gene851;Dbxref=Genbank:WP_002209978.1;Name=WP_002209978.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_002209978.1;transl_table=11 NC_009708.1 RefSeq gene 1013070 1013633 . - . ID=gene852;Name=YPSIP31758_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05515;old_locus_tag=YpsIP31758_0835 NC_009708.1 Protein Homology CDS 1013070 1013633 . - 0 ID=cds824;Parent=gene852;Dbxref=Genbank:WP_011192971.1;Name=WP_011192971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192971.1;transl_table=11 NC_009708.1 RefSeq gene 1013749 1014708 . - . ID=gene853;Name=YPSIP31758_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05520;old_locus_tag=YpsIP31758_0836 NC_009708.1 Protein Homology CDS 1013749 1014708 . - 0 ID=cds825;Parent=gene853;Dbxref=Genbank:WP_012104668.1;Name=WP_012104668.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_012104668.1;transl_table=11 NC_009708.1 RefSeq gene 1014734 1015465 . - . ID=gene854;Name=YPSIP31758_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05525;old_locus_tag=YpsIP31758_0837 NC_009708.1 Protein Homology CDS 1014734 1015465 . - 0 ID=cds826;Parent=gene854;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11 NC_009708.1 RefSeq gene 1015708 1016415 . - . ID=gene855;Name=YPSIP31758_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05530;old_locus_tag=YpsIP31758_0839 NC_009708.1 Protein Homology CDS 1015708 1016415 . - 0 ID=cds827;Parent=gene855;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11 NC_009708.1 RefSeq gene 1016513 1017025 . - . ID=gene856;Name=YPSIP31758_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05535;old_locus_tag=YpsIP31758_0840 NC_009708.1 Protein Homology CDS 1016513 1017025 . - 0 ID=cds828;Parent=gene856;Dbxref=Genbank:WP_012104670.1;Name=WP_012104670.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_012104670.1;transl_table=11 NC_009708.1 RefSeq gene 1017217 1018371 . - . ID=gene857;Name=YPSIP31758_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05540;old_locus_tag=YpsIP31758_0841 NC_009708.1 Protein Homology CDS 1017217 1018371 . - 0 ID=cds829;Parent=gene857;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11 NC_009708.1 RefSeq gene 1019578 1021557 . + . ID=gene858;Name=YPSIP31758_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05545;old_locus_tag=YpsIP31758_0843 NC_009708.1 Protein Homology CDS 1019578 1021557 . + 0 ID=cds830;Parent=gene858;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NC_009708.1 RefSeq gene 1021717 1022037 . + . ID=gene859;Name=YPSIP31758_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05550;old_locus_tag=YpsIP31758_0844 NC_009708.1 Protein Homology CDS 1021717 1022037 . + 0 ID=cds831;Parent=gene859;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1022110 1022280 . + . ID=id110;gbkey=repeat_region NC_009708.1 RefSeq gene 1022327 1023079 . - . ID=gene860;Name=YPSIP31758_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05555;old_locus_tag=YpsIP31758_0845 NC_009708.1 Protein Homology CDS 1022327 1023079 . - 0 ID=cds832;Parent=gene860;Dbxref=Genbank:WP_011192969.1;Name=WP_011192969.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192969.1;transl_table=11 NC_009708.1 RefSeq gene 1023553 1025547 . + . ID=gene861;Name=YPSIP31758_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05560;old_locus_tag=YpsIP31758_0847 NC_009708.1 Protein Homology CDS 1023553 1025547 . + 0 ID=cds833;Parent=gene861;Dbxref=Genbank:WP_011192968.1;Name=WP_011192968.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_011192968.1;transl_table=11 NC_009708.1 RefSeq gene 1025944 1026960 . + . ID=gene862;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05565;old_locus_tag=YpsIP31758_0848 NC_009708.1 Protein Homology CDS 1025944 1026960 . + 0 ID=cds834;Parent=gene862;Dbxref=Genbank:WP_002209964.1;Name=WP_002209964.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NC_009708.1 RefSeq gene 1027063 1028226 . + . ID=gene863;Name=YPSIP31758_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05570;old_locus_tag=YpsIP31758_0849 NC_009708.1 Protein Homology CDS 1027063 1028226 . + 0 ID=cds835;Parent=gene863;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NC_009708.1 RefSeq gene 1028346 1029425 . + . ID=gene864;Name=YPSIP31758_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05575;old_locus_tag=YpsIP31758_0850 NC_009708.1 Protein Homology CDS 1028346 1029425 . + 0 ID=cds836;Parent=gene864;Dbxref=Genbank:WP_002209962.1;Name=WP_002209962.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1029450 1029839 . + . ID=id111;gbkey=repeat_region NC_009708.1 RefSeq gene 1029642 1029932 . - . ID=gene865;Name=YPSIP31758_RS05580;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS05580 NC_009708.1 RefSeq gene 1030049 1030918 . + . ID=gene866;Name=YPSIP31758_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05585;old_locus_tag=YpsIP31758_0851 NC_009708.1 Protein Homology CDS 1030049 1030918 . + 0 ID=cds837;Parent=gene866;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11 NC_009708.1 RefSeq gene 1031163 1031780 . + . ID=gene867;Name=YPSIP31758_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05590;old_locus_tag=YpsIP31758_0852 NC_009708.1 Protein Homology CDS 1031163 1031780 . + 0 ID=cds838;Parent=gene867;Dbxref=Genbank:WP_002209960.1;Name=WP_002209960.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein ArgO;protein_id=WP_002209960.1;transl_table=11 NC_009708.1 RefSeq gene 1031970 1032749 . + . ID=gene868;Name=YPSIP31758_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05595;old_locus_tag=YpsIP31758_0853 NC_009708.1 Protein Homology CDS 1031970 1032749 . + 0 ID=cds839;Parent=gene868;Dbxref=Genbank:WP_011192966.1;Name=WP_011192966.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192966.1;transl_table=11 NC_009708.1 RefSeq gene 1032760 1033668 . - . ID=gene869;Name=YPSIP31758_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05600;old_locus_tag=YpsIP31758_0854 NC_009708.1 Protein Homology CDS 1032760 1033668 . - 0 ID=cds840;Parent=gene869;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11 NC_009708.1 RefSeq gene 1034010 1034666 . + . ID=gene870;Name=YPSIP31758_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05605;old_locus_tag=YpsIP31758_0855 NC_009708.1 Protein Homology CDS 1034010 1034666 . + 0 ID=cds841;Parent=gene870;Dbxref=Genbank:WP_002209957.1;Name=WP_002209957.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A 1;protein_id=WP_002209957.1;transl_table=11 NC_009708.1 RefSeq gene 1034973 1036214 . + . ID=gene871;Name=YPSIP31758_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05610;old_locus_tag=YpsIP31758_0856 NC_009708.1 Protein Homology CDS 1034973 1036214 . + 0 ID=cds842;Parent=gene871;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1036257 1036426 . + . ID=id112;gbkey=repeat_region NC_009708.1 RefSeq gene 1036479 1037075 . - . ID=gene872;Name=YPSIP31758_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05615;old_locus_tag=YpsIP31758_0857 NC_009708.1 Protein Homology CDS 1036479 1037075 . - 0 ID=cds843;Parent=gene872;Dbxref=Genbank:WP_011192965.1;Name=WP_011192965.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_011192965.1;transl_table=11 NC_009708.1 RefSeq gene 1037218 1037399 . - . ID=gene873;Name=YPSIP31758_RS22415;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22415 NC_009708.1 RefSeq transcript 1037218 1037399 . - . ID=rna28;Parent=gene873;gbkey=misc_RNA;product=6S / SsrS RNA NC_009708.1 RefSeq exon 1037218 1037399 . - . ID=id113;Parent=rna28;gbkey=misc_RNA;product=6S / SsrS RNA NC_009708.1 RefSeq gene 1037455 1037784 . - . ID=gene874;Name=YPSIP31758_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05620;old_locus_tag=YpsIP31758_0858 NC_009708.1 Protein Homology CDS 1037455 1037784 . - 0 ID=cds844;Parent=gene874;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NC_009708.1 RefSeq gene 1038121 1038699 . + . ID=gene875;Name=YPSIP31758_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05625;old_locus_tag=YpsIP31758_0859 NC_009708.1 Protein Homology CDS 1038121 1038699 . + 0 ID=cds845;Parent=gene875;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11 NC_009708.1 RefSeq gene 1038787 1040100 . + . ID=gene876;Name=YPSIP31758_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05630;old_locus_tag=YpsIP31758_0860 NC_009708.1 Protein Homology CDS 1038787 1040100 . + 0 ID=cds846;Parent=gene876;Dbxref=Genbank:WP_012104672.1;Name=WP_012104672.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_012104672.1;transl_table=11 NC_009708.1 RefSeq gene 1040305 1041483 . + . ID=gene877;Name=YPSIP31758_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05635;old_locus_tag=YpsIP31758_0861 NC_009708.1 Protein Homology CDS 1040305 1041483 . + 0 ID=cds847;Parent=gene877;Dbxref=Genbank:WP_011192963.1;Name=WP_011192963.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_011192963.1;transl_table=11 NC_009708.1 RefSeq gene 1041656 1042876 . + . ID=gene878;Name=YPSIP31758_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05640;old_locus_tag=YpsIP31758_0862 NC_009708.1 Protein Homology CDS 1041656 1042876 . + 0 ID=cds848;Parent=gene878;Dbxref=Genbank:WP_012104673.1;Name=WP_012104673.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_012104673.1;transl_table=11 NC_009708.1 RefSeq gene 1043597 1044694 . + . ID=gene879;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05645;old_locus_tag=YpsIP31758_0863 NC_009708.1 Protein Homology CDS 1043597 1044694 . + 0 ID=cds849;Parent=gene879;Dbxref=Genbank:WP_011192962.1;Name=WP_011192962.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_011192962.1;transl_table=11 NC_009708.1 RefSeq gene 1044763 1045149 . + . ID=gene880;Name=YPSIP31758_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05650;old_locus_tag=YpsIP31758_0864 NC_009708.1 Protein Homology CDS 1044763 1045149 . + 0 ID=cds850;Parent=gene880;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11 NC_009708.1 RefSeq gene 1045361 1048240 . + . ID=gene881;Name=YPSIP31758_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05655;old_locus_tag=YpsIP31758_0865 NC_009708.1 Protein Homology CDS 1045361 1048240 . + 0 ID=cds851;Parent=gene881;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1048275 1048447 . + . ID=id114;gbkey=repeat_region NC_009708.1 RefSeq gene 1048618 1049055 . + . ID=gene882;Name=YPSIP31758_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05660;old_locus_tag=YpsIP31758_0867 NC_009708.1 Protein Homology CDS 1048618 1049055 . + 0 ID=cds852;Parent=gene882;Dbxref=Genbank:WP_002209946.1;Name=WP_002209946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209946.1;transl_table=11 NC_009708.1 RefSeq gene 1050115 1050271 . + . ID=gene883;Name=YPSIP31758_RS05665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05665;pseudo=true NC_009708.1 Protein Homology CDS 1050115 1050271 . + 0 ID=cds853;Parent=gene883;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemagglutinin;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 1050268 1052265 . + . ID=gene884;Name=YPSIP31758_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05670;old_locus_tag=YpsIP31758_0868 NC_009708.1 Protein Homology CDS 1050268 1052265 . + 0 ID=cds854;Parent=gene884;Dbxref=Genbank:WP_041175744.1;Name=WP_041175744.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175744.1;transl_table=11 NC_009708.1 RefSeq gene 1052369 1053472 . + . ID=gene885;Name=YPSIP31758_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05675;old_locus_tag=YpsIP31758_0869 NC_009708.1 Protein Homology CDS 1052369 1053472 . + 0 ID=cds855;Parent=gene885;Dbxref=Genbank:WP_012104675.1;Name=WP_012104675.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104675.1;transl_table=11 NC_009708.1 RefSeq gene 1053674 1054375 . + . ID=gene886;Name=YPSIP31758_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05680;old_locus_tag=YpsIP31758_0870 NC_009708.1 Protein Homology CDS 1053674 1054375 . + 0 ID=cds856;Parent=gene886;Dbxref=Genbank:WP_002209942.1;Name=WP_002209942.1;gbkey=CDS;product=hemolysin III;protein_id=WP_002209942.1;transl_table=11 NC_009708.1 RefSeq gene 1054684 1055181 . + . ID=gene887;Name=YPSIP31758_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05685;old_locus_tag=YpsIP31758_0871 NC_009708.1 Protein Homology CDS 1054684 1055181 . + 0 ID=cds857;Parent=gene887;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11 NC_009708.1 RefSeq gene 1055254 1056246 . - . ID=gene888;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05690;old_locus_tag=YpsIP31758_0872 NC_009708.1 Protein Homology CDS 1055254 1056246 . - 0 ID=cds858;Parent=gene888;Dbxref=Genbank:WP_011192958.1;Name=WP_011192958.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_011192958.1;transl_table=11 NC_009708.1 RefSeq gene 1056562 1056828 . + . ID=gene889;Name=YPSIP31758_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05695;old_locus_tag=YpsIP31758_0873 NC_009708.1 Protein Homology CDS 1056562 1056828 . + 0 ID=cds859;Parent=gene889;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11 NC_009708.1 RefSeq gene 1056809 1057234 . + . ID=gene890;Name=YPSIP31758_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05700;old_locus_tag=YpsIP31758_0874 NC_009708.1 Protein Homology CDS 1056809 1057234 . + 0 ID=cds860;Parent=gene890;Dbxref=Genbank:WP_012104676.1;Name=WP_012104676.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104676.1;transl_table=11 NC_009708.1 RefSeq gene 1057234 1057932 . + . ID=gene891;Name=YPSIP31758_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05705;old_locus_tag=YpsIP31758_0875 NC_009708.1 Protein Homology CDS 1057234 1057932 . + 0 ID=cds861;Parent=gene891;Dbxref=Genbank:WP_012104677.1;Name=WP_012104677.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_012104677.1;transl_table=11 NC_009708.1 RefSeq gene 1057957 1059390 . + . ID=gene892;Name=YPSIP31758_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05710;old_locus_tag=YpsIP31758_0876 NC_009708.1 Protein Homology CDS 1057957 1059390 . + 0 ID=cds862;Parent=gene892;Dbxref=Genbank:WP_012104678.1;Name=WP_012104678.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_012104678.1;transl_table=11 NC_009708.1 RefSeq gene 1059475 1060932 . + . ID=gene893;Name=YPSIP31758_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05715;old_locus_tag=YpsIP31758_0877 NC_009708.1 Protein Homology CDS 1059475 1060932 . + 0 ID=cds863;Parent=gene893;Dbxref=Genbank:WP_012104679.1;Name=WP_012104679.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104679.1;transl_table=11 NC_009708.1 RefSeq gene 1061017 1061535 . - . ID=gene894;Name=YPSIP31758_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05720;old_locus_tag=YpsIP31758_0878 NC_009708.1 Protein Homology CDS 1061017 1061535 . - 0 ID=cds864;Parent=gene894;Dbxref=Genbank:WP_011192956.1;Name=WP_011192956.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_011192956.1;transl_table=11 NC_009708.1 RefSeq gene 1061642 1062541 . + . ID=gene895;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05725;old_locus_tag=YpsIP31758_0879 NC_009708.1 Protein Homology CDS 1061642 1062541 . + 0 ID=cds865;Parent=gene895;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NC_009708.1 RefSeq gene 1062572 1063288 . + . ID=gene896;Name=YPSIP31758_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05730;old_locus_tag=YpsIP31758_0880 NC_009708.1 Protein Homology CDS 1062572 1063288 . + 0 ID=cds866;Parent=gene896;Dbxref=Genbank:WP_002209932.1;Name=WP_002209932.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_002209932.1;transl_table=11 NC_009708.1 RefSeq gene 1063295 1065028 . + . ID=gene897;Name=YPSIP31758_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05735;old_locus_tag=YpsIP31758_0881 NC_009708.1 Protein Homology CDS 1063295 1065028 . + 0 ID=cds867;Parent=gene897;Dbxref=Genbank:WP_002209931.1;Name=WP_002209931.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NC_009708.1 RefSeq gene 1065373 1066305 . + . ID=gene898;Name=YPSIP31758_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05740 NC_009708.1 Protein Homology CDS 1065373 1066305 . + 0 ID=cds868;Parent=gene898;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11 NC_009708.1 RefSeq gene 1066315 1067832 . + . ID=gene899;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05745;old_locus_tag=YpsIP31758_0883 NC_009708.1 Protein Homology CDS 1066315 1067832 . + 0 ID=cds869;Parent=gene899;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NC_009708.1 RefSeq gene 1068026 1068099 . + . ID=gene900;Name=YPSIP31758_RS05750;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS05750;old_locus_tag=YpsIP31758_4211 NC_009708.1 tRNAscan-SE tRNA 1068026 1068099 . + . ID=rna29;Parent=gene900;anticodon=(pos:1068058..1068060);gbkey=tRNA;product=tRNA-Gly NC_009708.1 tRNAscan-SE exon 1068026 1068099 . + . ID=id115;Parent=rna29;anticodon=(pos:1068058..1068060);gbkey=tRNA;product=tRNA-Gly NC_009708.1 RefSeq gene 1068265 1069479 . + . ID=gene901;Name=YPSIP31758_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05755;old_locus_tag=YpsIP31758_0884 NC_009708.1 Protein Homology CDS 1068265 1069479 . + 0 ID=cds870;Parent=gene901;Dbxref=Genbank:WP_011192954.1;Name=WP_011192954.1;gbkey=CDS;product=integrase;protein_id=WP_011192954.1;transl_table=11 NC_009708.1 RefSeq gene 1069561 1069746 . - . ID=gene902;Name=YPSIP31758_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05760;old_locus_tag=YpsIP31758_0885 NC_009708.1 Protein Homology CDS 1069561 1069746 . - 0 ID=cds871;Parent=gene902;Dbxref=Genbank:WP_012104680.1;Name=WP_012104680.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104680.1;transl_table=11 NC_009708.1 RefSeq gene 1069847 1069972 . - . ID=gene903;Name=YPSIP31758_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05765;old_locus_tag=YpsIP31758_0886 NC_009708.1 Protein Homology CDS 1069847 1069972 . - 0 ID=cds872;Parent=gene903;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11 NC_009708.1 RefSeq gene 1070344 1070604 . + . ID=gene904;Name=YPSIP31758_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05770 NC_009708.1 Protein Homology CDS 1070344 1070604 . + 0 ID=cds873;Parent=gene904;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11 NC_009708.1 RefSeq gene 1070667 1071029 . + . ID=gene905;Name=YPSIP31758_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05775;old_locus_tag=YpsIP31758_0887 NC_009708.1 Protein Homology CDS 1070667 1071029 . + 0 ID=cds874;Parent=gene905;Dbxref=Genbank:WP_011192920.1;Name=WP_011192920.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_011192920.1;transl_table=11 NC_009708.1 RefSeq gene 1071193 1071495 . + . ID=gene906;Name=YPSIP31758_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05780;old_locus_tag=YpsIP31758_0888 NC_009708.1 Protein Homology CDS 1071193 1071495 . + 0 ID=cds875;Parent=gene906;Dbxref=Genbank:WP_012104682.1;Name=WP_012104682.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104682.1;transl_table=11 NC_009708.1 RefSeq gene 1071495 1071893 . + . ID=gene907;Name=YPSIP31758_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05785;old_locus_tag=YpsIP31758_0889 NC_009708.1 Protein Homology CDS 1071495 1071893 . + 0 ID=cds876;Parent=gene907;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11 NC_009708.1 RefSeq gene 1072293 1074584 . - . ID=gene908;Name=YPSIP31758_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05790;old_locus_tag=YpsIP31758_0890 NC_009708.1 Protein Homology CDS 1072293 1074584 . - 0 ID=cds877;Parent=gene908;Dbxref=Genbank:WP_012104683.1;Name=WP_012104683.1;gbkey=CDS;product=DNA primase;protein_id=WP_012104683.1;transl_table=11 NC_009708.1 RefSeq gene 1074884 1075210 . + . ID=gene909;Name=YPSIP31758_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05795;old_locus_tag=YpsIP31758_0891 NC_009708.1 Protein Homology CDS 1074884 1075210 . + 0 ID=cds878;Parent=gene909;Dbxref=Genbank:WP_002209922.1;Name=WP_002209922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209922.1;transl_table=11 NC_009708.1 RefSeq gene 1075203 1075355 . + . ID=gene910;Name=YPSIP31758_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05800;old_locus_tag=YpsIP31758_0892 NC_009708.1 Protein Homology CDS 1075203 1075355 . + 0 ID=cds879;Parent=gene910;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NC_009708.1 RefSeq gene 1075369 1075569 . - . ID=gene911;Name=YPSIP31758_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05805;old_locus_tag=YpsIP31758_0893 NC_009708.1 Protein Homology CDS 1075369 1075569 . - 0 ID=cds880;Parent=gene911;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11 NC_009708.1 RefSeq gene 1075751 1076083 . - . ID=gene912;Name=YPSIP31758_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05810 NC_009708.1 Protein Homology CDS 1075751 1076083 . - 0 ID=cds881;Parent=gene912;Dbxref=Genbank:WP_038835201.1;Name=WP_038835201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038835201.1;transl_table=11 NC_009708.1 RefSeq gene 1076198 1076431 . - . ID=gene913;Name=YPSIP31758_RS05815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05815;partial=true;pseudo=true;start_range=.,1076198 NC_009708.1 Protein Homology CDS 1076198 1076431 . - 0 ID=cds882;Parent=gene913;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1076198;transl_table=11 NC_009708.1 RefSeq gene 1076444 1076809 . - . ID=gene914;Name=YPSIP31758_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05820;old_locus_tag=YpsIP31758_0895 NC_009708.1 Protein Homology CDS 1076444 1076809 . - 0 ID=cds883;Parent=gene914;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NC_009708.1 RefSeq gene 1077078 1078220 . + . ID=gene915;Name=YPSIP31758_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05825;old_locus_tag=YpsIP31758_0896 NC_009708.1 Protein Homology CDS 1077078 1078220 . + 0 ID=cds884;Parent=gene915;Dbxref=Genbank:WP_002209918.1;Name=WP_002209918.1;gbkey=CDS;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11 NC_009708.1 RefSeq gene 1078699 1080231 . + . ID=gene916;Name=YPSIP31758_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05830;old_locus_tag=YpsIP31758_0897 NC_009708.1 Protein Homology CDS 1078699 1080231 . + 0 ID=cds885;Parent=gene916;Dbxref=Genbank:WP_012104685.1;Name=WP_012104685.1;gbkey=CDS;product=PAAR/S-type pyocin domain-containing protein;protein_id=WP_012104685.1;transl_table=11 NC_009708.1 RefSeq gene 1080231 1080425 . + . ID=gene917;Name=YPSIP31758_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05835 NC_009708.1 Protein Homology CDS 1080231 1080425 . + 0 ID=cds886;Parent=gene917;Dbxref=Genbank:WP_033852438.1;Name=WP_033852438.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033852438.1;transl_table=11 NC_009708.1 RefSeq gene 1080798 1081001 . + . ID=gene918;Name=YPSIP31758_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05840 NC_009708.1 Protein Homology CDS 1080798 1081001 . + 0 ID=cds887;Parent=gene918;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NC_009708.1 RefSeq gene 1081048 1081332 . + . ID=gene919;Name=YPSIP31758_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05845;old_locus_tag=YpsIP31758_0899 NC_009708.1 Protein Homology CDS 1081048 1081332 . + 0 ID=cds888;Parent=gene919;Dbxref=Genbank:WP_011192913.1;Name=WP_011192913.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_011192913.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1081142 1081396 . + . ID=id116;gbkey=repeat_region NC_009708.1 RefSeq gene 1081742 1083901 . + . ID=gene920;Name=YPSIP31758_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05850;old_locus_tag=YpsIP31758_0900 NC_009708.1 Protein Homology CDS 1081742 1083901 . + 0 ID=cds889;Parent=gene920;Dbxref=Genbank:WP_012303725.1;Name=WP_012303725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303725.1;transl_table=11 NC_009708.1 RefSeq gene 1083871 1084638 . + . ID=gene921;Name=YPSIP31758_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05855;old_locus_tag=YpsIP31758_0901 NC_009708.1 Protein Homology CDS 1083871 1084638 . + 0 ID=cds890;Parent=gene921;Dbxref=Genbank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209913.1;transl_table=11 NC_009708.1 RefSeq gene 1084951 1085163 . + . ID=gene922;Name=YPSIP31758_RS05860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS05860;pseudo=true NC_009708.1 Protein Homology CDS 1084951 1085163 . + 0 ID=cds891;Parent=gene922;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1085041..1085043%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 1085244 1086023 . + . ID=gene923;Name=YPSIP31758_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05865;old_locus_tag=YpsIP31758_0902 NC_009708.1 Protein Homology CDS 1085244 1086023 . + 0 ID=cds892;Parent=gene923;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11 NC_009708.1 RefSeq gene 1086279 1086545 . + . ID=gene924;Name=YPSIP31758_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05870;old_locus_tag=YpsIP31758_0903 NC_009708.1 Protein Homology CDS 1086279 1086545 . + 0 ID=cds893;Parent=gene924;Dbxref=Genbank:WP_002209911.1;Name=WP_002209911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209911.1;transl_table=11 NC_009708.1 RefSeq gene 1086644 1086964 . - . ID=gene925;Name=YPSIP31758_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05875;old_locus_tag=YpsIP31758_0904 NC_009708.1 Protein Homology CDS 1086644 1086964 . - 0 ID=cds894;Parent=gene925;Dbxref=Genbank:WP_002209910.1;Name=WP_002209910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209910.1;transl_table=11 NC_009708.1 RefSeq gene 1086964 1087644 . - . ID=gene926;Name=YPSIP31758_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05880;old_locus_tag=YpsIP31758_0905 NC_009708.1 Protein Homology CDS 1086964 1087644 . - 0 ID=cds895;Parent=gene926;Dbxref=Genbank:WP_002209909.1;Name=WP_002209909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_002209909.1;transl_table=11 NC_009708.1 RefSeq gene 1088087 1088944 . - . ID=gene927;Name=YPSIP31758_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05885;old_locus_tag=YpsIP31758_0906 NC_009708.1 Protein Homology CDS 1088087 1088944 . - 0 ID=cds896;Parent=gene927;Dbxref=Genbank:WP_012104689.1;Name=WP_012104689.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104689.1;transl_table=11 NC_009708.1 RefSeq gene 1089320 1089838 . - . ID=gene928;Name=YPSIP31758_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05890;old_locus_tag=YpsIP31758_0907 NC_009708.1 Protein Homology CDS 1089320 1089838 . - 0 ID=cds897;Parent=gene928;Dbxref=Genbank:WP_012104690.1;Name=WP_012104690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104690.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1090434 1090603 . + . ID=id117;gbkey=repeat_region NC_009708.1 RefSeq gene 1090788 1091789 . - . ID=gene929;Name=YPSIP31758_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05895;old_locus_tag=YpsIP31758_0909 NC_009708.1 Protein Homology CDS 1090788 1091789 . - 0 ID=cds898;Parent=gene929;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11 NC_009708.1 RefSeq gene 1092223 1093227 . - . ID=gene930;Name=YPSIP31758_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05900;old_locus_tag=YpsIP31758_0911 NC_009708.1 Protein Homology CDS 1092223 1093227 . - 0 ID=cds899;Parent=gene930;Dbxref=Genbank:WP_032467017.1;Name=WP_032467017.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_032467017.1;transl_table=11 NC_009708.1 RefSeq gene 1093298 1094806 . - . ID=gene931;Name=YPSIP31758_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05905;old_locus_tag=YpsIP31758_0912 NC_009708.1 Protein Homology CDS 1093298 1094806 . - 0 ID=cds900;Parent=gene931;Dbxref=Genbank:WP_012104694.1;Name=WP_012104694.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=enolase;protein_id=WP_012104694.1;transl_table=11 NC_009708.1 RefSeq gene 1095345 1096451 . - . ID=gene932;Name=YPSIP31758_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05910;old_locus_tag=YpsIP31758_0913 NC_009708.1 Protein Homology CDS 1095345 1096451 . - 0 ID=cds901;Parent=gene932;Dbxref=Genbank:WP_002223743.1;Name=WP_002223743.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002223743.1;transl_table=11 NC_009708.1 RefSeq gene 1096814 1098049 . + . ID=gene933;Name=YPSIP31758_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05915;old_locus_tag=YpsIP31758_0914 NC_009708.1 Protein Homology CDS 1096814 1098049 . + 0 ID=cds902;Parent=gene933;Dbxref=Genbank:WP_012104695.1;Name=WP_012104695.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_012104695.1;transl_table=11 NC_009708.1 RefSeq gene 1098209 1099516 . + . ID=gene934;Name=YPSIP31758_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05920;old_locus_tag=YpsIP31758_0915 NC_009708.1 Protein Homology CDS 1098209 1099516 . + 0 ID=cds903;Parent=gene934;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NC_009708.1 RefSeq gene 1099528 1100379 . + . ID=gene935;Name=YPSIP31758_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05925;old_locus_tag=YpsIP31758_0916 NC_009708.1 Protein Homology CDS 1099528 1100379 . + 0 ID=cds904;Parent=gene935;Dbxref=Genbank:WP_002209899.1;Name=WP_002209899.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NC_009708.1 RefSeq gene 1100384 1101586 . + . ID=gene936;Name=YPSIP31758_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05930;old_locus_tag=YpsIP31758_0917 NC_009708.1 Protein Homology CDS 1100384 1101586 . + 0 ID=cds905;Parent=gene936;Dbxref=Genbank:WP_002209898.1;Name=WP_002209898.1;gbkey=CDS;product=galactosidase;protein_id=WP_002209898.1;transl_table=11 NC_009708.1 RefSeq gene 1101637 1103697 . + . ID=gene937;Name=YPSIP31758_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05935;old_locus_tag=YpsIP31758_0918 NC_009708.1 Protein Homology CDS 1101637 1103697 . + 0 ID=cds906;Parent=gene937;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NC_009708.1 RefSeq gene 1103809 1104120 . + . ID=gene938;Name=YPSIP31758_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05940;old_locus_tag=YpsIP31758_0919 NC_009708.1 Protein Homology CDS 1103809 1104120 . + 0 ID=cds907;Parent=gene938;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11 NC_009708.1 RefSeq gene 1104525 1105784 . - . ID=gene939;Name=YPSIP31758_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05945;old_locus_tag=YpsIP31758_0920 NC_009708.1 Protein Homology CDS 1104525 1105784 . - 0 ID=cds908;Parent=gene939;Dbxref=Genbank:WP_011192907.1;Name=WP_011192907.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_011192907.1;transl_table=11 NC_009708.1 RefSeq gene 1106056 1107129 . + . ID=gene940;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05950;old_locus_tag=YpsIP31758_0922 NC_009708.1 Protein Homology CDS 1106056 1107129 . + 0 ID=cds909;Parent=gene940;Dbxref=Genbank:WP_012104696.1;Name=WP_012104696.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_012104696.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1107228 1107399 . + . ID=id118;gbkey=repeat_region NC_009708.1 RefSeq gene 1107442 1109817 . - . ID=gene941;Name=YPSIP31758_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05955;old_locus_tag=YpsIP31758_0924 NC_009708.1 Protein Homology CDS 1107442 1109817 . - 0 ID=cds910;Parent=gene941;Dbxref=Genbank:WP_012104697.1;Name=WP_012104697.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_012104697.1;transl_table=11 NC_009708.1 RefSeq gene 1109966 1111273 . - . ID=gene942;Name=YPSIP31758_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05960;old_locus_tag=YpsIP31758_0926 NC_009708.1 Protein Homology CDS 1109966 1111273 . - 0 ID=cds911;Parent=gene942;Dbxref=Genbank:WP_011192905.1;Name=WP_011192905.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_011192905.1;transl_table=11 NC_009708.1 RefSeq gene 1111667 1112749 . + . ID=gene943;Name=YPSIP31758_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05965;old_locus_tag=YpsIP31758_0927 NC_009708.1 Protein Homology CDS 1111667 1112749 . + 0 ID=cds912;Parent=gene943;Dbxref=Genbank:WP_012104699.1;Name=WP_012104699.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_012104699.1;transl_table=11 NC_009708.1 RefSeq gene 1112739 1113020 . + . ID=gene944;Name=YPSIP31758_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05970 NC_009708.1 Protein Homology CDS 1112739 1113020 . + 0 ID=cds913;Parent=gene944;Dbxref=Genbank:WP_041175745.1;Name=WP_041175745.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175745.1;transl_table=11 NC_009708.1 RefSeq gene 1112990 1113568 . - . ID=gene945;Name=YPSIP31758_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05975;old_locus_tag=YpsIP31758_0928 NC_009708.1 Protein Homology CDS 1112990 1113568 . - 0 ID=cds914;Parent=gene945;Dbxref=Genbank:WP_012104700.1;Name=WP_012104700.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_012104700.1;transl_table=11 NC_009708.1 RefSeq gene 1113592 1114446 . - . ID=gene946;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05980;old_locus_tag=YpsIP31758_0929 NC_009708.1 Protein Homology CDS 1113592 1114446 . - 0 ID=cds915;Parent=gene946;Dbxref=Genbank:WP_011192902.1;Name=WP_011192902.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_011192902.1;transl_table=11 NC_009708.1 RefSeq gene 1114557 1116044 . - . ID=gene947;Name=YPSIP31758_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05985;old_locus_tag=YpsIP31758_0930 NC_009708.1 Protein Homology CDS 1114557 1116044 . - 0 ID=cds916;Parent=gene947;Dbxref=Genbank:WP_012104701.1;Name=WP_012104701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104701.1;transl_table=11 NC_009708.1 RefSeq gene 1116167 1117774 . - . ID=gene948;Name=YPSIP31758_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05990;old_locus_tag=YpsIP31758_0931 NC_009708.1 Protein Homology CDS 1116167 1117774 . - 0 ID=cds917;Parent=gene948;Dbxref=Genbank:WP_002209886.1;Name=WP_002209886.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209886.1;transl_table=11 NC_009708.1 RefSeq gene 1117795 1119021 . - . ID=gene949;Name=YPSIP31758_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS05995;old_locus_tag=YpsIP31758_0932 NC_009708.1 Protein Homology CDS 1117795 1119021 . - 0 ID=cds918;Parent=gene949;Dbxref=Genbank:WP_011192899.1;Name=WP_011192899.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_011192899.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1119192 1119363 . + . ID=id119;gbkey=repeat_region NC_009708.1 RefSeq gene 1119452 1120510 . - . ID=gene950;Name=YPSIP31758_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06000;old_locus_tag=YpsIP31758_0933 NC_009708.1 Protein Homology CDS 1119452 1120510 . - 0 ID=cds919;Parent=gene950;Dbxref=Genbank:WP_012104703.1;Name=WP_012104703.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_012104703.1;transl_table=11 NC_009708.1 RefSeq gene 1120526 1121281 . - . ID=gene951;Name=YPSIP31758_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06005;old_locus_tag=YpsIP31758_0935 NC_009708.1 Protein Homology CDS 1120526 1121281 . - 0 ID=cds920;Parent=gene951;Dbxref=Genbank:WP_012104704.1;Name=WP_012104704.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_012104704.1;transl_table=11 NC_009708.1 RefSeq gene 1121477 1122643 . - . ID=gene952;Name=YPSIP31758_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06010;old_locus_tag=YpsIP31758_0936 NC_009708.1 Protein Homology CDS 1121477 1122643 . - 0 ID=cds921;Parent=gene952;Dbxref=Genbank:WP_012104705.1;Name=WP_012104705.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_012104705.1;transl_table=11 NC_009708.1 RefSeq gene 1122646 1123086 . - . ID=gene953;Name=YPSIP31758_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06015;old_locus_tag=YpsIP31758_0937 NC_009708.1 Protein Homology CDS 1122646 1123086 . - 0 ID=cds922;Parent=gene953;Dbxref=Genbank:WP_012104706.1;Name=WP_012104706.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_012104706.1;transl_table=11 NC_009708.1 RefSeq gene 1123172 1124062 . - . ID=gene954;Name=YPSIP31758_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06020;old_locus_tag=YpsIP31758_0938 NC_009708.1 Protein Homology CDS 1123172 1124062 . - 0 ID=cds923;Parent=gene954;Dbxref=Genbank:WP_002209880.1;Name=WP_002209880.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NC_009708.1 RefSeq gene 1124052 1124840 . - . ID=gene955;Name=YPSIP31758_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06025;old_locus_tag=YpsIP31758_0939 NC_009708.1 Protein Homology CDS 1124052 1124840 . - 0 ID=cds924;Parent=gene955;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NC_009708.1 RefSeq gene 1124887 1125384 . - . ID=gene956;Name=YPSIP31758_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06030;old_locus_tag=YpsIP31758_0940 NC_009708.1 Protein Homology CDS 1124887 1125384 . - 0 ID=cds925;Parent=gene956;Dbxref=Genbank:WP_002209878.1;Name=WP_002209878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NC_009708.1 RefSeq gene 1125402 1126568 . - . ID=gene957;Name=YPSIP31758_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06035;old_locus_tag=YpsIP31758_0941 NC_009708.1 Protein Homology CDS 1125402 1126568 . - 0 ID=cds926;Parent=gene957;Dbxref=Genbank:WP_011192898.1;Name=WP_011192898.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_011192898.1;transl_table=11 NC_009708.1 RefSeq gene 1126565 1127863 . - . ID=gene958;Name=YPSIP31758_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06040;old_locus_tag=YpsIP31758_0942 NC_009708.1 Protein Homology CDS 1126565 1127863 . - 0 ID=cds927;Parent=gene958;Dbxref=Genbank:WP_012104707.1;Name=WP_012104707.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose-bisphosphate aldolase;protein_id=WP_012104707.1;transl_table=11 NC_009708.1 RefSeq gene 1127913 1128689 . - . ID=gene959;Name=YPSIP31758_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06045;old_locus_tag=YpsIP31758_0943 NC_009708.1 Protein Homology CDS 1127913 1128689 . - 0 ID=cds928;Parent=gene959;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11 NC_009708.1 RefSeq gene 1129529 1131082 . + . ID=gene960;Name=YPSIP31758_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06050;old_locus_tag=YpsIP31758_0945 NC_009708.1 Protein Homology CDS 1129529 1131082 . + 0 ID=cds929;Parent=gene960;Dbxref=Genbank:WP_002209873.1;Name=WP_002209873.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209873.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1131282 1131470 . + . ID=id120;gbkey=repeat_region NC_009708.1 RefSeq gene 1131522 1134635 . - . ID=gene961;Name=YPSIP31758_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06055;old_locus_tag=YpsIP31758_0946 NC_009708.1 Protein Homology CDS 1131522 1134635 . - 0 ID=cds930;Parent=gene961;Dbxref=Genbank:WP_041175746.1;Name=WP_041175746.1;gbkey=CDS;product=chondroitin lyase;protein_id=WP_041175746.1;transl_table=11 NC_009708.1 RefSeq gene 1134705 1136891 . - . ID=gene962;Name=YPSIP31758_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06060;old_locus_tag=YpsIP31758_0947 NC_009708.1 Protein Homology CDS 1134705 1136891 . - 0 ID=cds931;Parent=gene962;Dbxref=Genbank:WP_012104710.1;Name=WP_012104710.1;gbkey=CDS;product=autotransporter;protein_id=WP_012104710.1;transl_table=11 NC_009708.1 RefSeq gene 1137006 1137956 . - . ID=gene963;Name=YPSIP31758_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06065;old_locus_tag=YpsIP31758_0948 NC_009708.1 Protein Homology CDS 1137006 1137956 . - 0 ID=cds932;Parent=gene963;Dbxref=Genbank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209868.1;transl_table=11 NC_009708.1 RefSeq gene 1137978 1138172 . - . ID=gene964;Name=YPSIP31758_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06070 NC_009708.1 Protein Homology CDS 1137978 1138172 . - 0 ID=cds933;Parent=gene964;Dbxref=Genbank:WP_002214083.1;Name=WP_002214083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214083.1;transl_table=11 NC_009708.1 RefSeq gene 1138559 1138747 . - . ID=gene965;Name=YPSIP31758_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06075;old_locus_tag=YpsIP31758_0949 NC_009708.1 Protein Homology CDS 1138559 1138747 . - 0 ID=cds934;Parent=gene965;Dbxref=Genbank:WP_012104711.1;Name=WP_012104711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104711.1;transl_table=11 NC_009708.1 RefSeq gene 1139242 1139997 . + . ID=gene966;Name=YPSIP31758_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06080;old_locus_tag=YpsIP31758_0950 NC_009708.1 Protein Homology CDS 1139242 1139997 . + 0 ID=cds935;Parent=gene966;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NC_009708.1 RefSeq gene 1140740 1141156 . + . ID=gene967;Name=YPSIP31758_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06085;old_locus_tag=YpsIP31758_0951 NC_009708.1 Protein Homology CDS 1140740 1141156 . + 0 ID=cds936;Parent=gene967;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11 NC_009708.1 RefSeq gene 1141326 1141727 . + . ID=gene968;Name=YPSIP31758_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06090 NC_009708.1 Protein Homology CDS 1141326 1141727 . + 0 ID=cds937;Parent=gene968;Dbxref=Genbank:WP_032466598.1;Name=WP_032466598.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_032466598.1;transl_table=11 NC_009708.1 RefSeq gene 1141808 1143730 . + . ID=gene969;Name=YPSIP31758_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06095;old_locus_tag=YpsIP31758_0953 NC_009708.1 Protein Homology CDS 1141808 1143730 . + 0 ID=cds938;Parent=gene969;Dbxref=Genbank:WP_002220086.1;Name=WP_002220086.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_002220086.1;transl_table=11 NC_009708.1 RefSeq gene 1143727 1145238 . + . ID=gene970;Name=YPSIP31758_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06100;old_locus_tag=YpsIP31758_0954 NC_009708.1 Protein Homology CDS 1143727 1145238 . + 0 ID=cds939;Parent=gene970;Dbxref=Genbank:WP_012104715.1;Name=WP_012104715.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_012104715.1;transl_table=11 NC_009708.1 RefSeq gene 1145381 1146427 . + . ID=gene971;Name=YPSIP31758_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06105;old_locus_tag=YpsIP31758_0955 NC_009708.1 Protein Homology CDS 1145381 1146427 . + 0 ID=cds940;Parent=gene971;Dbxref=Genbank:WP_041175849.1;Name=WP_041175849.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_041175849.1;transl_table=11 NC_009708.1 RefSeq gene 1146447 1146884 . + . ID=gene972;Name=YPSIP31758_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06110;old_locus_tag=YpsIP31758_0956 NC_009708.1 Protein Homology CDS 1146447 1146884 . + 0 ID=cds941;Parent=gene972;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11 NC_009708.1 RefSeq gene 1146889 1147431 . + . ID=gene973;Name=YPSIP31758_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06115 NC_009708.1 Protein Homology CDS 1146889 1147431 . + 0 ID=cds942;Parent=gene973;Dbxref=Genbank:WP_038824412.1;Name=WP_038824412.1;gbkey=CDS;product=general secretion pathway protein GspH;protein_id=WP_038824412.1;transl_table=11 NC_009708.1 RefSeq gene 1147523 1147813 . + . ID=gene974;Name=YPSIP31758_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06120;old_locus_tag=YpsIP31758_0957 NC_009708.1 Protein Homology CDS 1147523 1147813 . + 0 ID=cds943;Parent=gene974;Dbxref=Genbank:WP_012303740.1;Name=WP_012303740.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_012303740.1;transl_table=11 NC_009708.1 RefSeq gene 1147806 1148402 . + . ID=gene975;Name=YPSIP31758_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06125;old_locus_tag=YpsIP31758_0958 NC_009708.1 Protein Homology CDS 1147806 1148402 . + 0 ID=cds944;Parent=gene975;Dbxref=Genbank:WP_012104718.1;Name=WP_012104718.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_012104718.1;transl_table=11 NC_009708.1 RefSeq gene 1148411 1149367 . + . ID=gene976;Name=YPSIP31758_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06130;old_locus_tag=YpsIP31758_0959 NC_009708.1 Protein Homology CDS 1148411 1149367 . + 0 ID=cds945;Parent=gene976;Dbxref=Genbank:WP_012104719.1;Name=WP_012104719.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_012104719.1;transl_table=11 NC_009708.1 RefSeq gene 1149351 1150541 . + . ID=gene977;Name=YPSIP31758_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06135;old_locus_tag=YpsIP31758_0960 NC_009708.1 Protein Homology CDS 1149351 1150541 . + 0 ID=cds946;Parent=gene977;Dbxref=Genbank:WP_041175747.1;Name=WP_041175747.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_041175747.1;transl_table=11 NC_009708.1 RefSeq gene 1150550 1150999 . + . ID=gene978;Name=YPSIP31758_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06140;old_locus_tag=YpsIP31758_0961 NC_009708.1 Protein Homology CDS 1150550 1150999 . + 0 ID=cds947;Parent=gene978;Dbxref=Genbank:WP_033852486.1;Name=WP_033852486.1;gbkey=CDS;product=membrane protein;protein_id=WP_033852486.1;transl_table=11 NC_009708.1 RefSeq gene 1151028 1151867 . + . ID=gene979;Name=YPSIP31758_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06145;old_locus_tag=YpsIP31758_0963 NC_009708.1 Protein Homology CDS 1151028 1151867 . + 0 ID=cds948;Parent=gene979;Dbxref=Genbank:WP_041175850.1;Name=WP_041175850.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_041175850.1;transl_table=11 NC_009708.1 RefSeq gene 1151851 1152216 . - . ID=gene980;Name=YPSIP31758_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06150;old_locus_tag=YpsIP31758_0962 NC_009708.1 Protein Homology CDS 1151851 1152216 . - 0 ID=cds949;Parent=gene980;Dbxref=Genbank:WP_012104723.1;Name=WP_012104723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104723.1;transl_table=11 NC_009708.1 RefSeq gene 1152502 1153161 . + . ID=gene981;Name=YPSIP31758_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06155;old_locus_tag=YpsIP31758_0964 NC_009708.1 Protein Homology CDS 1152502 1153161 . + 0 ID=cds950;Parent=gene981;Dbxref=Genbank:WP_012104724.1;Name=WP_012104724.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104724.1;transl_table=11 NC_009708.1 RefSeq gene 1153218 1153619 . + . ID=gene982;Name=YPSIP31758_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06160;old_locus_tag=YpsIP31758_0965 NC_009708.1 Protein Homology CDS 1153218 1153619 . + 0 ID=cds951;Parent=gene982;Dbxref=Genbank:WP_012104725.1;Name=WP_012104725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104725.1;transl_table=11 NC_009708.1 RefSeq gene 1153774 1155465 . + . ID=gene983;Name=YPSIP31758_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06165;old_locus_tag=YpsIP31758_0967 NC_009708.1 Protein Homology CDS 1153774 1155465 . + 0 ID=cds952;Parent=gene983;Dbxref=Genbank:WP_012104726.1;Name=WP_012104726.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_012104726.1;transl_table=11 NC_009708.1 RefSeq gene 1155451 1156086 . - . ID=gene984;Name=YPSIP31758_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06170;old_locus_tag=YpsIP31758_0966 NC_009708.1 Protein Homology CDS 1155451 1156086 . - 0 ID=cds953;Parent=gene984;Dbxref=Genbank:WP_002209852.1;Name=WP_002209852.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002209852.1;transl_table=11 NC_009708.1 RefSeq gene 1156199 1157086 . - . ID=gene985;Name=YPSIP31758_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06175;old_locus_tag=YpsIP31758_0968 NC_009708.1 Protein Homology CDS 1156199 1157086 . - 0 ID=cds954;Parent=gene985;Dbxref=Genbank:WP_012104727.1;Name=WP_012104727.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_012104727.1;transl_table=11 NC_009708.1 RefSeq gene 1157193 1158101 . + . ID=gene986;Name=YPSIP31758_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06180;old_locus_tag=YpsIP31758_0969 NC_009708.1 Protein Homology CDS 1157193 1158101 . + 0 ID=cds955;Parent=gene986;Dbxref=Genbank:WP_002209849.1;Name=WP_002209849.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NC_009708.1 RefSeq gene 1158470 1159630 . + . ID=gene987;Name=YPSIP31758_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06185;old_locus_tag=YpsIP31758_0971 NC_009708.1 Protein Homology CDS 1158470 1159630 . + 0 ID=cds956;Parent=gene987;Dbxref=Genbank:WP_002209848.1;Name=WP_002209848.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11 NC_009708.1 RefSeq gene 1159627 1160568 . - . ID=gene988;Name=YPSIP31758_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06190;old_locus_tag=YpsIP31758_0970 NC_009708.1 Protein Homology CDS 1159627 1160568 . - 0 ID=cds957;Parent=gene988;Dbxref=Genbank:WP_002209847.1;Name=WP_002209847.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209847.1;transl_table=11 NC_009708.1 RefSeq gene 1160783 1162045 . + . ID=gene989;Name=YPSIP31758_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06195;old_locus_tag=YpsIP31758_0973 NC_009708.1 Protein Homology CDS 1160783 1162045 . + 0 ID=cds958;Parent=gene989;Dbxref=Genbank:WP_002209846.1;Name=WP_002209846.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_002209846.1;transl_table=11 NC_009708.1 RefSeq gene 1162042 1163064 . - . ID=gene990;Name=YPSIP31758_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06200;old_locus_tag=YpsIP31758_0972 NC_009708.1 Protein Homology CDS 1162042 1163064 . - 0 ID=cds959;Parent=gene990;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11 NC_009708.1 RefSeq gene 1163414 1165675 . + . ID=gene991;Name=YPSIP31758_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06205;old_locus_tag=YpsIP31758_0974 NC_009708.1 Protein Homology CDS 1163414 1165675 . + 0 ID=cds960;Parent=gene991;Dbxref=Genbank:WP_012104728.1;Name=WP_012104728.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_012104728.1;transl_table=11 NC_009708.1 RefSeq gene 1165923 1166017 . + . ID=gene992;Name=YPSIP31758_RS22420;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22420 NC_009708.1 RefSeq transcript 1165923 1166017 . + . ID=rna30;Parent=gene992;gbkey=misc_RNA;product=sraE/rygA/rygB family RNA NC_009708.1 RefSeq exon 1165923 1166017 . + . ID=id121;Parent=rna30;gbkey=misc_RNA;product=sraE/rygA/rygB family RNA NC_009708.1 RefSeq gene 1166123 1168279 . + . ID=gene993;Name=YPSIP31758_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06210;old_locus_tag=YpsIP31758_0975 NC_009708.1 Protein Homology CDS 1166123 1168279 . + 0 ID=cds961;Parent=gene993;Dbxref=Genbank:WP_011192876.1;Name=WP_011192876.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=bifunctional protein Aas;protein_id=WP_011192876.1;transl_table=11 NC_009708.1 RefSeq gene 1168276 1169496 . + . ID=gene994;Name=YPSIP31758_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06215;old_locus_tag=YpsIP31758_0976 NC_009708.1 Protein Homology CDS 1168276 1169496 . + 0 ID=cds962;Parent=gene994;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NC_009708.1 RefSeq gene 1169525 1169758 . - . ID=gene995;Name=YPSIP31758_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06220;old_locus_tag=YpsIP31758_0977 NC_009708.1 Protein Homology CDS 1169525 1169758 . - 0 ID=cds963;Parent=gene995;Dbxref=Genbank:WP_002228641.1;Name=WP_002228641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228641.1;transl_table=11 NC_009708.1 RefSeq gene 1169837 1170088 . + . ID=gene996;Name=YPSIP31758_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06225;old_locus_tag=YpsIP31758_0978 NC_009708.1 Protein Homology CDS 1169837 1170088 . + 0 ID=cds964;Parent=gene996;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1170241 1170409 . + . ID=id122;gbkey=repeat_region NC_009708.1 RefSeq gene 1170465 1171505 . - . ID=gene997;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06230;old_locus_tag=YpsIP31758_0979 NC_009708.1 Protein Homology CDS 1170465 1171505 . - 0 ID=cds965;Parent=gene997;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NC_009708.1 RefSeq gene 1171876 1172562 . - . ID=gene998;Name=YPSIP31758_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06235;old_locus_tag=YpsIP31758_0980 NC_009708.1 Protein Homology CDS 1171876 1172562 . - 0 ID=cds966;Parent=gene998;Dbxref=Genbank:WP_002209838.1;Name=WP_002209838.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_002209838.1;transl_table=11 NC_009708.1 RefSeq gene 1172795 1172986 . + . ID=gene999;Name=YPSIP31758_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06240 NC_009708.1 Protein Homology CDS 1172795 1172986 . + 0 ID=cds967;Parent=gene999;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11 NC_009708.1 RefSeq gene 1172961 1173233 . + . ID=gene1000;Name=YPSIP31758_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06245 NC_009708.1 Protein Homology CDS 1172961 1173233 . + 0 ID=cds968;Parent=gene1000;Dbxref=Genbank:WP_041175748.1;Name=WP_041175748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175748.1;transl_table=11 NC_009708.1 RefSeq gene 1173259 1173786 . + . ID=gene1001;Name=YPSIP31758_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06250;old_locus_tag=YpsIP31758_0981 NC_009708.1 Protein Homology CDS 1173259 1173786 . + 0 ID=cds969;Parent=gene1001;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NC_009708.1 RefSeq gene 1173799 1176045 . + . ID=gene1002;Name=YPSIP31758_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06255;old_locus_tag=YpsIP31758_0982 NC_009708.1 Protein Homology CDS 1173799 1176045 . + 0 ID=cds970;Parent=gene1002;Dbxref=Genbank:WP_011192874.1;Name=WP_011192874.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_011192874.1;transl_table=11 NC_009708.1 RefSeq gene 1176296 1177168 . + . ID=gene1003;Name=YPSIP31758_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06260;old_locus_tag=YpsIP31758_0983 NC_009708.1 Protein Homology CDS 1176296 1177168 . + 0 ID=cds971;Parent=gene1003;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NC_009708.1 RefSeq gene 1177175 1177969 . + . ID=gene1004;Name=YPSIP31758_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06265;old_locus_tag=YpsIP31758_0984 NC_009708.1 Protein Homology CDS 1177175 1177969 . + 0 ID=cds972;Parent=gene1004;Dbxref=Genbank:WP_011192873.1;Name=WP_011192873.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_011192873.1;transl_table=11 NC_009708.1 RefSeq gene 1178067 1178282 . + . ID=gene1005;Name=YPSIP31758_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06270 NC_009708.1 Protein Homology CDS 1178067 1178282 . + 0 ID=cds973;Parent=gene1005;Dbxref=Genbank:WP_041175851.1;Name=WP_041175851.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175851.1;transl_table=11 NC_009708.1 RefSeq gene 1178269 1178838 . + . ID=gene1006;Name=YPSIP31758_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06275;old_locus_tag=YpsIP31758_0985 NC_009708.1 Protein Homology CDS 1178269 1178838 . + 0 ID=cds974;Parent=gene1006;Dbxref=Genbank:WP_002228638.1;Name=WP_002228638.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002228638.1;transl_table=11 NC_009708.1 RefSeq gene 1178829 1179437 . + . ID=gene1007;Name=YPSIP31758_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06280;old_locus_tag=YpsIP31758_0986 NC_009708.1 Protein Homology CDS 1178829 1179437 . + 0 ID=cds975;Parent=gene1007;Dbxref=Genbank:WP_012104729.1;Name=WP_012104729.1;gbkey=CDS;product=cleavage protein;protein_id=WP_012104729.1;transl_table=11 NC_009708.1 RefSeq gene 1179434 1179904 . + . ID=gene1008;Name=YPSIP31758_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06285;old_locus_tag=YpsIP31758_0987 NC_009708.1 Protein Homology CDS 1179434 1179904 . + 0 ID=cds976;Parent=gene1008;Dbxref=Genbank:WP_012104730.1;Name=WP_012104730.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104730.1;transl_table=11 NC_009708.1 RefSeq gene 1179937 1180302 . + . ID=gene1009;Name=YPSIP31758_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06290;old_locus_tag=YpsIP31758_0988 NC_009708.1 Protein Homology CDS 1179937 1180302 . + 0 ID=cds977;Parent=gene1009;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11 NC_009708.1 RefSeq gene 1180437 1183808 . + . ID=gene1010;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06295;old_locus_tag=YpsIP31758_0989 NC_009708.1 Protein Homology CDS 1180437 1183808 . + 0 ID=cds978;Parent=gene1010;Dbxref=Genbank:WP_011192871.1;Name=WP_011192871.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_011192871.1;transl_table=11 NC_009708.1 RefSeq gene 1183890 1186778 . + . ID=gene1011;Name=YPSIP31758_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06300;old_locus_tag=YpsIP31758_0990 NC_009708.1 Protein Homology CDS 1183890 1186778 . + 0 ID=cds979;Parent=gene1011;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11 NC_009708.1 RefSeq gene 1186775 1190437 . + . ID=gene1012;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06305;old_locus_tag=YpsIP31758_0991 NC_009708.1 Protein Homology CDS 1186775 1190437 . + 0 ID=cds980;Parent=gene1012;Dbxref=Genbank:WP_012104732.1;Name=WP_012104732.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_012104732.1;transl_table=11 NC_009708.1 RefSeq gene 1190434 1192407 . + . ID=gene1013;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06310;old_locus_tag=YpsIP31758_0992 NC_009708.1 Protein Homology CDS 1190434 1192407 . + 0 ID=cds981;Parent=gene1013;Dbxref=Genbank:WP_012104733.1;Name=WP_012104733.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_012104733.1;transl_table=11 NC_009708.1 RefSeq gene 1192562 1193887 . - . ID=gene1014;Name=YPSIP31758_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06315;old_locus_tag=YpsIP31758_0993 NC_009708.1 Protein Homology CDS 1192562 1193887 . - 0 ID=cds982;Parent=gene1014;Dbxref=Genbank:WP_002211624.1;Name=WP_002211624.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=amino-acid acetyltransferase;protein_id=WP_002211624.1;transl_table=11 NC_009708.1 RefSeq gene 1194123 1195373 . + . ID=gene1015;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06320;old_locus_tag=YpsIP31758_0994 NC_009708.1 Protein Homology CDS 1194123 1195373 . + 0 ID=cds983;Parent=gene1015;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11 NC_009708.1 RefSeq gene 1195603 1195679 . - . ID=gene1016;Name=YPSIP31758_RS06325;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS06325;old_locus_tag=YpsIP31758_4212 NC_009708.1 tRNAscan-SE tRNA 1195603 1195679 . - . ID=rna31;Parent=gene1016;anticodon=(pos:complement(1195643..1195645));gbkey=tRNA;product=tRNA-Met NC_009708.1 tRNAscan-SE exon 1195603 1195679 . - . ID=id123;Parent=rna31;anticodon=(pos:complement(1195643..1195645));gbkey=tRNA;product=tRNA-Met NC_009708.1 RefSeq gene 1195740 1195816 . - . ID=gene1017;Name=YPSIP31758_RS06330;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS06330;old_locus_tag=YpsIP31758_4213 NC_009708.1 tRNAscan-SE tRNA 1195740 1195816 . - . ID=rna32;Parent=gene1017;anticodon=(pos:complement(1195780..1195782));gbkey=tRNA;product=tRNA-Met NC_009708.1 tRNAscan-SE exon 1195740 1195816 . - . ID=id124;Parent=rna32;anticodon=(pos:complement(1195780..1195782));gbkey=tRNA;product=tRNA-Met NC_009708.1 RefSeq gene 1195984 1196060 . - . ID=gene1018;Name=YPSIP31758_RS06335;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS06335;old_locus_tag=YpsIP31758_4214 NC_009708.1 tRNAscan-SE tRNA 1195984 1196060 . - . ID=rna33;Parent=gene1018;anticodon=(pos:complement(1196024..1196026));gbkey=tRNA;product=tRNA-Met NC_009708.1 tRNAscan-SE exon 1195984 1196060 . - . ID=id125;Parent=rna33;anticodon=(pos:complement(1196024..1196026));gbkey=tRNA;product=tRNA-Met NC_009708.1 RefSeq gene 1196275 1197447 . + . ID=gene1019;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06340;old_locus_tag=YpsIP31758_0995 NC_009708.1 Protein Homology CDS 1196275 1197447 . + 0 ID=cds984;Parent=gene1019;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11 NC_009708.1 RefSeq gene 1197590 1198417 . + . ID=gene1020;Name=YPSIP31758_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06345;old_locus_tag=YpsIP31758_0996 NC_009708.1 Protein Homology CDS 1197590 1198417 . + 0 ID=cds985;Parent=gene1020;Dbxref=Genbank:WP_012104734.1;Name=WP_012104734.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_012104734.1;transl_table=11 NC_009708.1 RefSeq gene 1198467 1198910 . - . ID=gene1021;Name=YPSIP31758_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06350;old_locus_tag=YpsIP31758_0997 NC_009708.1 Protein Homology CDS 1198467 1198910 . - 0 ID=cds986;Parent=gene1021;Dbxref=Genbank:WP_041175749.1;Name=WP_041175749.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_041175749.1;transl_table=11 NC_009708.1 RefSeq gene 1199043 1200248 . - . ID=gene1022;Name=YPSIP31758_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06355;old_locus_tag=YpsIP31758_0998 NC_009708.1 Protein Homology CDS 1199043 1200248 . - 0 ID=cds987;Parent=gene1022;Dbxref=Genbank:WP_012104737.1;Name=WP_012104737.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_012104737.1;transl_table=11 NC_009708.1 RefSeq gene 1200711 1200817 . - . ID=gene1023;Name=gcvB;gbkey=Gene;gene=gcvB;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22425 NC_009708.1 RefSeq transcript 1200711 1200817 . - . ID=rna34;Parent=gene1023;gbkey=misc_RNA;gene=gcvB;product=gcvB RNA NC_009708.1 RefSeq exon 1200711 1200817 . - . ID=id126;Parent=rna34;gbkey=misc_RNA;gene=gcvB;product=gcvB RNA NC_009708.1 RefSeq gene 1200946 1201863 . + . ID=gene1024;Name=YPSIP31758_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06360;old_locus_tag=YpsIP31758_0999 NC_009708.1 Protein Homology CDS 1200946 1201863 . + 0 ID=cds988;Parent=gene1024;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11 NC_009708.1 RefSeq gene 1202044 1202424 . + . ID=gene1025;Name=YPSIP31758_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06365;old_locus_tag=YpsIP31758_1000 NC_009708.1 Protein Homology CDS 1202044 1202424 . + 0 ID=cds989;Parent=gene1025;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11 NC_009708.1 RefSeq gene 1202417 1203523 . + . ID=gene1026;Name=YPSIP31758_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06370;old_locus_tag=YpsIP31758_1001 NC_009708.1 Protein Homology CDS 1202417 1203523 . + 0 ID=cds990;Parent=gene1026;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1203566 1203743 . + . ID=id127;gbkey=repeat_region NC_009708.1 RefSeq gene 1203774 1204529 . - . ID=gene1027;Name=YPSIP31758_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06375;old_locus_tag=YpsIP31758_1002 NC_009708.1 Protein Homology CDS 1203774 1204529 . - 0 ID=cds991;Parent=gene1027;Dbxref=Genbank:WP_011192868.1;Name=WP_011192868.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_011192868.1;transl_table=11 NC_009708.1 RefSeq gene 1204789 1206153 . - . ID=gene1028;Name=YPSIP31758_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06380;old_locus_tag=YpsIP31758_1003 NC_009708.1 Protein Homology CDS 1204789 1206153 . - 0 ID=cds992;Parent=gene1028;Dbxref=Genbank:WP_002212121.1;Name=WP_002212121.1;gbkey=CDS;product=LOG family protein;protein_id=WP_002212121.1;transl_table=11 NC_009708.1 RefSeq gene 1206306 1207151 . - . ID=gene1029;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06385;old_locus_tag=YpsIP31758_1004 NC_009708.1 Protein Homology CDS 1206306 1207151 . - 0 ID=cds993;Parent=gene1029;Dbxref=Genbank:WP_011192866.1;Name=WP_011192866.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_011192866.1;transl_table=11 NC_009708.1 RefSeq gene 1207283 1207834 . + . ID=gene1030;Name=YPSIP31758_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06390;old_locus_tag=YpsIP31758_1005 NC_009708.1 Protein Homology CDS 1207283 1207834 . + 0 ID=cds994;Parent=gene1030;Dbxref=Genbank:WP_012104738.1;Name=WP_012104738.1;gbkey=CDS;product=protein Syd;protein_id=WP_012104738.1;transl_table=11 NC_009708.1 RefSeq gene 1208063 1208385 . + . ID=gene1031;Name=YPSIP31758_RS22430;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22430 NC_009708.1 RefSeq transcript 1208063 1208385 . + . ID=rna35;Parent=gene1031;gbkey=misc_RNA;product=CsrB/RsmB RNA family NC_009708.1 RefSeq exon 1208063 1208385 . + . ID=id128;Parent=rna35;gbkey=misc_RNA;product=CsrB/RsmB RNA family NC_009708.1 RefSeq gene 1208542 1208874 . + . ID=gene1032;Name=YPSIP31758_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06395;old_locus_tag=YpsIP31758_1006 NC_009708.1 Protein Homology CDS 1208542 1208874 . + 0 ID=cds995;Parent=gene1032;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11 NC_009708.1 RefSeq gene 1208874 1209647 . + . ID=gene1033;Name=YPSIP31758_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06400;old_locus_tag=YpsIP31758_1007 NC_009708.1 Protein Homology CDS 1208874 1209647 . + 0 ID=cds996;Parent=gene1033;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11 NC_009708.1 RefSeq gene 1209675 1210124 . + . ID=gene1034;Name=YPSIP31758_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06405;old_locus_tag=YpsIP31758_1008 NC_009708.1 Protein Homology CDS 1209675 1210124 . + 0 ID=cds997;Parent=gene1034;Dbxref=Genbank:WP_012104739.1;Name=WP_012104739.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_012104739.1;transl_table=11 NC_009708.1 RefSeq gene 1210214 1210603 . - . ID=gene1035;Name=YPSIP31758_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06410;old_locus_tag=YpsIP31758_1009 NC_009708.1 Protein Homology CDS 1210214 1210603 . - 0 ID=cds998;Parent=gene1035;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11 NC_009708.1 RefSeq gene 1210727 1211551 . - . ID=gene1036;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06415;old_locus_tag=YpsIP31758_1010 NC_009708.1 Protein Homology CDS 1210727 1211551 . - 0 ID=cds999;Parent=gene1036;Dbxref=Genbank:WP_002212128.1;Name=WP_002212128.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NC_009708.1 RefSeq gene 1211726 1214407 . - . ID=gene1037;Name=YPSIP31758_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06420;old_locus_tag=YpsIP31758_1011 NC_009708.1 Protein Homology CDS 1211726 1214407 . - 0 ID=cds1000;Parent=gene1037;Dbxref=Genbank:WP_002212129.1;Name=WP_002212129.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_002212129.1;transl_table=11 NC_009708.1 RefSeq gene 1214467 1215258 . - . ID=gene1038;Name=YPSIP31758_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06425;old_locus_tag=YpsIP31758_1012 NC_009708.1 Protein Homology CDS 1214467 1215258 . - 0 ID=cds1001;Parent=gene1038;Dbxref=Genbank:WP_012104740.1;Name=WP_012104740.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_012104740.1;transl_table=11 NC_009708.1 RefSeq gene 1215459 1215665 . + . ID=gene1039;Name=YPSIP31758_RS22435;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22435 NC_009708.1 RefSeq transcript 1215459 1215665 . + . ID=rna36;Parent=gene1039;gbkey=misc_RNA;product=t44 RNA NC_009708.1 RefSeq exon 1215459 1215665 . + . ID=id129;Parent=rna36;gbkey=misc_RNA;product=t44 RNA NC_009708.1 RefSeq gene 1215693 1216418 . + . ID=gene1040;Name=YPSIP31758_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06430;old_locus_tag=YpsIP31758_1013 NC_009708.1 Protein Homology CDS 1215693 1216418 . + 0 ID=cds1002;Parent=gene1040;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NC_009708.1 RefSeq gene 1216546 1217403 . + . ID=gene1041;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06435;old_locus_tag=YpsIP31758_1014 NC_009708.1 Protein Homology CDS 1216546 1217403 . + 0 ID=cds1003;Parent=gene1041;Dbxref=Genbank:WP_002212132.1;Name=WP_002212132.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NC_009708.1 RefSeq gene 1217612 1218337 . + . ID=gene1042;Name=YPSIP31758_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06440;old_locus_tag=YpsIP31758_1015 NC_009708.1 Protein Homology CDS 1217612 1218337 . + 0 ID=cds1004;Parent=gene1042;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11 NC_009708.1 RefSeq gene 1218473 1219030 . + . ID=gene1043;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06445;old_locus_tag=YpsIP31758_1016 NC_009708.1 Protein Homology CDS 1218473 1219030 . + 0 ID=cds1005;Parent=gene1043;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11 NC_009708.1 RefSeq gene 1219244 1220440 . + . ID=gene1044;Name=YPSIP31758_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06450;old_locus_tag=YpsIP31758_1017 NC_009708.1 Protein Homology CDS 1219244 1220440 . + 0 ID=cds1006;Parent=gene1044;Dbxref=Genbank:WP_002212135.1;Name=WP_002212135.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11 NC_009708.1 RefSeq gene 1220663 1221421 . + . ID=gene1045;Name=YPSIP31758_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06455;old_locus_tag=YpsIP31758_1018 NC_009708.1 Protein Homology CDS 1220663 1221421 . + 0 ID=cds1007;Parent=gene1045;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11 NC_009708.1 RefSeq gene 1221431 1222279 . + . ID=gene1046;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06460;old_locus_tag=YpsIP31758_1019 NC_009708.1 Protein Homology CDS 1221431 1222279 . + 0 ID=cds1008;Parent=gene1046;Dbxref=Genbank:WP_002212137.1;Name=WP_002212137.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_002212137.1;transl_table=11 NC_009708.1 RefSeq gene 1222308 1223663 . + . ID=gene1047;Name=YPSIP31758_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06465;old_locus_tag=YpsIP31758_1020 NC_009708.1 Protein Homology CDS 1222308 1223663 . + 0 ID=cds1009;Parent=gene1047;Dbxref=Genbank:WP_002212138.1;Name=WP_002212138.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=protease RseP;protein_id=WP_002212138.1;transl_table=11 NC_009708.1 RefSeq gene 1223700 1226087 . + . ID=gene1048;Name=YPSIP31758_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06470;old_locus_tag=YpsIP31758_1021 NC_009708.1 Protein Homology CDS 1223700 1226087 . + 0 ID=cds1010;Parent=gene1048;Dbxref=Genbank:WP_002212139.1;Name=WP_002212139.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NC_009708.1 RefSeq gene 1226245 1226742 . + . ID=gene1049;Name=YPSIP31758_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06475;old_locus_tag=YpsIP31758_1022 NC_009708.1 Protein Homology CDS 1226245 1226742 . + 0 ID=cds1011;Parent=gene1049;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11 NC_009708.1 RefSeq gene 1226746 1227768 . + . ID=gene1050;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06480;old_locus_tag=YpsIP31758_1023 NC_009708.1 Protein Homology CDS 1226746 1227768 . + 0 ID=cds1012;Parent=gene1050;Dbxref=Genbank:WP_012104741.1;Name=WP_012104741.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_012104741.1;transl_table=11 NC_009708.1 RefSeq gene 1227926 1228456 . + . ID=gene1051;Name=YPSIP31758_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06485;old_locus_tag=YpsIP31758_1024 NC_009708.1 Protein Homology CDS 1227926 1228456 . + 0 ID=cds1013;Parent=gene1051;Dbxref=Genbank:WP_002217656.1;Name=WP_002217656.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002217656.1;transl_table=11 NC_009708.1 RefSeq gene 1228460 1229248 . + . ID=gene1052;Name=YPSIP31758_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06490;old_locus_tag=YpsIP31758_1025 NC_009708.1 Protein Homology CDS 1228460 1229248 . + 0 ID=cds1014;Parent=gene1052;Dbxref=Genbank:WP_002212143.1;Name=WP_002212143.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NC_009708.1 RefSeq gene 1229252 1230436 . + . ID=gene1053;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06495;old_locus_tag=YpsIP31758_1026 NC_009708.1 Protein Homology CDS 1229252 1230436 . + 0 ID=cds1015;Parent=gene1053;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NC_009708.1 RefSeq gene 1230433 1231029 . + . ID=gene1054;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06500;old_locus_tag=YpsIP31758_1027 NC_009708.1 Protein Homology CDS 1230433 1231029 . + 0 ID=cds1016;Parent=gene1054;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NC_009708.1 RefSeq gene 1231192 1234674 . + . ID=gene1055;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06505;old_locus_tag=YpsIP31758_1028 NC_009708.1 Protein Homology CDS 1231192 1234674 . + 0 ID=cds1017;Parent=gene1055;Dbxref=Genbank:WP_012104742.1;Name=WP_012104742.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_012104742.1;transl_table=11 NC_009708.1 RefSeq gene 1234687 1235646 . + . ID=gene1056;Name=YPSIP31758_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06510;old_locus_tag=YpsIP31758_1029 NC_009708.1 Protein Homology CDS 1234687 1235646 . + 0 ID=cds1018;Parent=gene1056;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NC_009708.1 RefSeq gene 1235830 1236228 . + . ID=gene1057;Name=YPSIP31758_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06515;old_locus_tag=YpsIP31758_1030 NC_009708.1 Protein Homology CDS 1235830 1236228 . + 0 ID=cds1019;Parent=gene1057;Dbxref=Genbank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;product=lyase;protein_id=WP_002212148.1;transl_table=11 NC_009708.1 RefSeq gene 1236230 1237612 . + . ID=gene1058;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06520;old_locus_tag=YpsIP31758_1031 NC_009708.1 Protein Homology CDS 1236230 1237612 . + 0 ID=cds1020;Parent=gene1058;Dbxref=Genbank:WP_041175750.1;Name=WP_041175750.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthetase;protein_id=WP_041175750.1;transl_table=11 NC_009708.1 RefSeq gene 1237868 1238185 . + . ID=gene1059;Name=YPSIP31758_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06525;old_locus_tag=YpsIP31758_1032 NC_009708.1 Protein Homology CDS 1237868 1238185 . + 0 ID=cds1021;Parent=gene1059;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11 NC_009708.1 RefSeq gene 1238450 1238710 . - . ID=gene1060;Name=YPSIP31758_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06530;old_locus_tag=YpsIP31758_1033 NC_009708.1 Protein Homology CDS 1238450 1238710 . - 0 ID=cds1022;Parent=gene1060;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NC_009708.1 RefSeq gene 1238697 1238897 . - . ID=gene1061;Name=YPSIP31758_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06535;old_locus_tag=YpsIP31758_1034 NC_009708.1 Protein Homology CDS 1238697 1238897 . - 0 ID=cds1023;Parent=gene1061;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11 NC_009708.1 RefSeq gene 1239139 1239687 . + . ID=gene1062;Name=YPSIP31758_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06540;old_locus_tag=YpsIP31758_1035 NC_009708.1 Protein Homology CDS 1239139 1239687 . + 0 ID=cds1024;Parent=gene1062;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11 NC_009708.1 RefSeq gene 1239690 1240106 . + . ID=gene1063;Name=YPSIP31758_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06545;old_locus_tag=YpsIP31758_1036 NC_009708.1 Protein Homology CDS 1239690 1240106 . + 0 ID=cds1025;Parent=gene1063;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11 NC_009708.1 RefSeq gene 1240191 1240874 . + . ID=gene1064;Name=YPSIP31758_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06550;old_locus_tag=YpsIP31758_1037 NC_009708.1 Protein Homology CDS 1240191 1240874 . + 0 ID=cds1026;Parent=gene1064;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11 NC_009708.1 RefSeq gene 1241008 1242726 . - . ID=gene1065;Name=YPSIP31758_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06555;old_locus_tag=YpsIP31758_1038 NC_009708.1 Protein Homology CDS 1241008 1242726 . - 0 ID=cds1027;Parent=gene1065;Dbxref=Genbank:WP_012104744.1;Name=WP_012104744.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_012104744.1;transl_table=11 NC_009708.1 RefSeq gene 1242830 1243537 . - . ID=gene1066;Name=YPSIP31758_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06560;old_locus_tag=YpsIP31758_1039 NC_009708.1 Protein Homology CDS 1242830 1243537 . - 0 ID=cds1028;Parent=gene1066;Dbxref=Genbank:WP_012104745.1;Name=WP_012104745.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_012104745.1;transl_table=11 NC_009708.1 RefSeq gene 1243534 1243941 . - . ID=gene1067;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06565;old_locus_tag=YpsIP31758_1040 NC_009708.1 Protein Homology CDS 1243534 1243941 . - 0 ID=cds1029;Parent=gene1067;Dbxref=Genbank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_002212158.1;transl_table=11 NC_009708.1 RefSeq gene 1244059 1244874 . - . ID=gene1068;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06570;old_locus_tag=YpsIP31758_1041 NC_009708.1 Protein Homology CDS 1244059 1244874 . - 0 ID=cds1030;Parent=gene1068;Dbxref=Genbank:WP_012104746.1;Name=WP_012104746.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_012104746.1;transl_table=11 NC_009708.1 RefSeq gene 1244938 1245591 . - . ID=gene1069;Name=YPSIP31758_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06575;old_locus_tag=YpsIP31758_1042 NC_009708.1 Protein Homology CDS 1244938 1245591 . - 0 ID=cds1031;Parent=gene1069;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11 NC_009708.1 RefSeq gene 1245584 1246615 . - . ID=gene1070;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06580;old_locus_tag=YpsIP31758_1043 NC_009708.1 Protein Homology CDS 1245584 1246615 . - 0 ID=cds1032;Parent=gene1070;Dbxref=Genbank:WP_002212161.1;Name=WP_002212161.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002212161.1;transl_table=11 NC_009708.1 RefSeq gene 1246802 1247368 . + . ID=gene1071;Name=YPSIP31758_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06585;old_locus_tag=YpsIP31758_1044 NC_009708.1 Protein Homology CDS 1246802 1247368 . + 0 ID=cds1033;Parent=gene1071;Dbxref=Genbank:WP_002220062.1;Name=WP_002220062.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1247534 1253151 . + . ID=id130;gbkey=repeat_region NC_009708.1 RefSeq gene 1247807 1249355 . + . ID=gene1072;Name=YPSIP31758_RS06595;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS06595;old_locus_tag=YpsIP31758_4215 NC_009708.1 RefSeq rRNA 1247807 1249355 . + . ID=rna37;Parent=gene1072;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq exon 1247807 1249355 . + . ID=id131;Parent=rna37;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq gene 1249489 1249564 . + . ID=gene1073;Name=YPSIP31758_RS06600;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS06600;old_locus_tag=YpsIP31758_4216 NC_009708.1 tRNAscan-SE tRNA 1249489 1249564 . + . ID=rna38;Parent=gene1073;anticodon=(pos:1249523..1249525);gbkey=tRNA;product=tRNA-Glu NC_009708.1 tRNAscan-SE exon 1249489 1249564 . + . ID=id132;Parent=rna38;anticodon=(pos:1249523..1249525);gbkey=tRNA;product=tRNA-Glu NC_009708.1 RefSeq gene 1249808 1252741 . + . ID=gene1074;Name=YPSIP31758_RS06605;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS06605;old_locus_tag=YpsIP31758_4217 NC_009708.1 RefSeq rRNA 1249808 1252741 . + . ID=rna39;Parent=gene1074;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq exon 1249808 1252741 . + . ID=id133;Parent=rna39;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq gene 1252833 1252948 . + . ID=gene1075;Name=YPSIP31758_RS06610;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS06610;old_locus_tag=YpsIP31758_4218 NC_009708.1 cmsearch rRNA 1252833 1252948 . + . ID=rna40;Parent=gene1075;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 1252833 1252948 . + . ID=id134;Parent=rna40;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq gene 1253074 1253150 . + . ID=gene1076;Name=YPSIP31758_RS06615;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS06615;old_locus_tag=YpsIP31758_4219 NC_009708.1 tRNAscan-SE tRNA 1253074 1253150 . + . ID=rna41;Parent=gene1076;anticodon=(pos:1253108..1253110);gbkey=tRNA;product=tRNA-Asp NC_009708.1 tRNAscan-SE exon 1253074 1253150 . + . ID=id135;Parent=rna41;anticodon=(pos:1253108..1253110);gbkey=tRNA;product=tRNA-Asp NC_009708.1 RefSeq gene 1253586 1254389 . + . ID=gene1077;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06620;old_locus_tag=YpsIP31758_1048 NC_009708.1 Protein Homology CDS 1253586 1254389 . + 0 ID=cds1034;Parent=gene1077;Dbxref=Genbank:WP_012104747.1;Name=WP_012104747.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_012104747.1;transl_table=11 NC_009708.1 RefSeq gene 1254442 1254888 . + . ID=gene1078;Name=YPSIP31758_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06625;old_locus_tag=YpsIP31758_1049 NC_009708.1 Protein Homology CDS 1254442 1254888 . + 0 ID=cds1035;Parent=gene1078;Dbxref=Genbank:WP_041175751.1;Name=WP_041175751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175751.1;transl_table=11 NC_009708.1 RefSeq gene 1255270 1256031 . + . ID=gene1079;Name=YPSIP31758_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06630;old_locus_tag=YpsIP31758_1050 NC_009708.1 Protein Homology CDS 1255270 1256031 . + 0 ID=cds1036;Parent=gene1079;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11 NC_009708.1 RefSeq gene 1256074 1257453 . - . ID=gene1080;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=YPSIP31758_RS06635;old_locus_tag=YpsIP31758_1051 NC_009708.1 Protein Homology CDS 1256074 1257453 . - 0 ID=cds1037;Parent=gene1080;Dbxref=Genbank:WP_012104749.1;Name=WP_012104749.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_012104749.1;transl_table=11 NC_009708.1 RefSeq gene 1257525 1258280 . - . ID=gene1081;Name=YPSIP31758_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06640;old_locus_tag=YpsIP31758_1052 NC_009708.1 Protein Homology CDS 1257525 1258280 . - 0 ID=cds1038;Parent=gene1081;Dbxref=Genbank:WP_011192852.1;Name=WP_011192852.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_011192852.1;transl_table=11 NC_009708.1 RefSeq gene 1258325 1259044 . + . ID=gene1082;Name=YPSIP31758_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06645;old_locus_tag=YpsIP31758_1053 NC_009708.1 Protein Homology CDS 1258325 1259044 . + 0 ID=cds1039;Parent=gene1082;Dbxref=Genbank:WP_002210698.1;Name=WP_002210698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210698.1;transl_table=11 NC_009708.1 RefSeq gene 1259099 1259563 . - . ID=gene1083;Name=YPSIP31758_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06650;old_locus_tag=YpsIP31758_1054 NC_009708.1 Protein Homology CDS 1259099 1259563 . - 0 ID=cds1040;Parent=gene1083;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NC_009708.1 RefSeq gene 1259633 1260397 . + . ID=gene1084;Name=YPSIP31758_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06655;old_locus_tag=YpsIP31758_1055 NC_009708.1 Protein Homology CDS 1259633 1260397 . + 0 ID=cds1041;Parent=gene1084;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NC_009708.1 RefSeq gene 1260510 1260586 . + . ID=gene1085;Name=YPSIP31758_RS06660;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS06660;old_locus_tag=YpsIP31758_4220 NC_009708.1 tRNAscan-SE tRNA 1260510 1260586 . + . ID=rna42;Parent=gene1085;anticodon=(pos:1260544..1260546);gbkey=tRNA;product=tRNA-Asp NC_009708.1 tRNAscan-SE exon 1260510 1260586 . + . ID=id136;Parent=rna42;anticodon=(pos:1260544..1260546);gbkey=tRNA;product=tRNA-Asp NC_009708.1 RefSeq gene 1260643 1262127 . - . ID=gene1086;Name=YPSIP31758_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06665;old_locus_tag=YpsIP31758_1056 NC_009708.1 Protein Homology CDS 1260643 1262127 . - 0 ID=cds1042;Parent=gene1086;Dbxref=Genbank:WP_002210701.1;Name=WP_002210701.1;gbkey=CDS;product=permease;protein_id=WP_002210701.1;transl_table=11 NC_009708.1 RefSeq gene 1262448 1263398 . + . ID=gene1087;Name=YPSIP31758_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06670;old_locus_tag=YpsIP31758_1058 NC_009708.1 Protein Homology CDS 1262448 1263398 . + 0 ID=cds1043;Parent=gene1087;Dbxref=Genbank:WP_011192850.1;Name=WP_011192850.1;gbkey=CDS;product=allantoinase;protein_id=WP_011192850.1;transl_table=11 NC_009708.1 RefSeq gene 1263459 1264463 . - . ID=gene1088;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06675;old_locus_tag=YpsIP31758_1059 NC_009708.1 Protein Homology CDS 1263459 1264463 . - 0 ID=cds1044;Parent=gene1088;Dbxref=Genbank:WP_011192849.1;Name=WP_011192849.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_011192849.1;transl_table=11 NC_009708.1 RefSeq gene 1264511 1265677 . - . ID=gene1089;Name=YPSIP31758_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06680;old_locus_tag=YpsIP31758_1060 NC_009708.1 Protein Homology CDS 1264511 1265677 . - 0 ID=cds1045;Parent=gene1089;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11 NC_009708.1 RefSeq gene 1265670 1266869 . - . ID=gene1090;Name=YPSIP31758_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06685;old_locus_tag=YpsIP31758_1061 NC_009708.1 Protein Homology CDS 1265670 1266869 . - 0 ID=cds1046;Parent=gene1090;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11 NC_009708.1 RefSeq gene 1267545 1268516 . - . ID=gene1091;Name=YPSIP31758_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06690;old_locus_tag=YpsIP31758_1062 NC_009708.1 Protein Homology CDS 1267545 1268516 . - 0 ID=cds1047;Parent=gene1091;Dbxref=Genbank:WP_012104754.1;Name=WP_012104754.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_012104754.1;transl_table=11 NC_009708.1 RefSeq gene 1268605 1270755 . - . ID=gene1092;Name=YPSIP31758_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06695;old_locus_tag=YpsIP31758_1063 NC_009708.1 Protein Homology CDS 1268605 1270755 . - 0 ID=cds1048;Parent=gene1092;Dbxref=Genbank:WP_011192848.1;Name=WP_011192848.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_011192848.1;transl_table=11 NC_009708.1 RefSeq gene 1270737 1271141 . - . ID=gene1093;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06700;old_locus_tag=YpsIP31758_1064 NC_009708.1 Protein Homology CDS 1270737 1271141 . - 0 ID=cds1049;Parent=gene1093;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11 NC_009708.1 RefSeq gene 1271155 1271391 . - . ID=gene1094;Name=YPSIP31758_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06705;old_locus_tag=YpsIP31758_1065 NC_009708.1 Protein Homology CDS 1271155 1271391 . - 0 ID=cds1050;Parent=gene1094;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11 NC_009708.1 RefSeq gene 1271913 1272278 . + . ID=gene1095;Name=YPSIP31758_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06710;old_locus_tag=YpsIP31758_1066 NC_009708.1 Protein Homology CDS 1271913 1272278 . + 0 ID=cds1051;Parent=gene1095;Dbxref=Genbank:WP_011192847.1;Name=WP_011192847.1;gbkey=CDS;product=acid shock protein;protein_id=WP_011192847.1;transl_table=11 NC_009708.1 RefSeq gene 1272757 1273092 . + . ID=gene1096;Name=YPSIP31758_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06715;old_locus_tag=YpsIP31758_1067 NC_009708.1 Protein Homology CDS 1272757 1273092 . + 0 ID=cds1052;Parent=gene1096;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11 NC_009708.1 RefSeq gene 1273190 1273639 . - . ID=gene1097;Name=YPSIP31758_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06720;old_locus_tag=YpsIP31758_1068 NC_009708.1 Protein Homology CDS 1273190 1273639 . - 0 ID=cds1053;Parent=gene1097;Dbxref=Genbank:WP_012104755.1;Name=WP_012104755.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104755.1;transl_table=11 NC_009708.1 RefSeq gene 1273804 1274142 . - . ID=gene1098;Name=YPSIP31758_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06725;old_locus_tag=YpsIP31758_1069 NC_009708.1 Protein Homology CDS 1273804 1274142 . - 0 ID=cds1054;Parent=gene1098;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11 NC_009708.1 cmsearch region 1274472 1274933 . + . ID=id137;Note=cspA;gbkey=misc_feature NC_009708.1 RefSeq gene 1274650 1274862 . + . ID=gene1099;Name=YPSIP31758_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06730;old_locus_tag=YpsIP31758_1070 NC_009708.1 Protein Homology CDS 1274650 1274862 . + 0 ID=cds1055;Parent=gene1099;Dbxref=Genbank:WP_002212220.1;Name=WP_002212220.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_002212220.1;transl_table=11 NC_009708.1 RefSeq gene 1275651 1277228 . + . ID=gene1100;Name=YPSIP31758_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06735;old_locus_tag=YpsIP31758_1071 NC_009708.1 Protein Homology CDS 1275651 1277228 . + 0 ID=cds1056;Parent=gene1100;Dbxref=Genbank:WP_012104756.1;Name=WP_012104756.1;gbkey=CDS;product=nickel ABC transporter substrate-binding protein;protein_id=WP_012104756.1;transl_table=11 NC_009708.1 RefSeq gene 1277213 1278196 . + . ID=gene1101;Name=YPSIP31758_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06740;old_locus_tag=YpsIP31758_1072 NC_009708.1 Protein Homology CDS 1277213 1278196 . + 0 ID=cds1057;Parent=gene1101;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11 NC_009708.1 RefSeq gene 1278193 1278999 . + . ID=gene1102;Name=YPSIP31758_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06745;old_locus_tag=YpsIP31758_1073 NC_009708.1 Protein Homology CDS 1278193 1278999 . + 0 ID=cds1058;Parent=gene1102;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NC_009708.1 RefSeq gene 1278999 1279805 . + . ID=gene1103;Name=YPSIP31758_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06750;old_locus_tag=YpsIP31758_1074 NC_009708.1 Protein Homology CDS 1278999 1279805 . + 0 ID=cds1059;Parent=gene1103;Dbxref=Genbank:WP_002212225.1;Name=WP_002212225.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002212225.1;transl_table=11 NC_009708.1 RefSeq gene 1279798 1280463 . + . ID=gene1104;Name=YPSIP31758_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06755;old_locus_tag=YpsIP31758_1075 NC_009708.1 Protein Homology CDS 1279798 1280463 . + 0 ID=cds1060;Parent=gene1104;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11 NC_009708.1 RefSeq gene 1281662 1281964 . + . ID=gene1105;Name=YPSIP31758_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06760;old_locus_tag=YpsIP31758_1077 NC_009708.1 Protein Homology CDS 1281662 1281964 . + 0 ID=cds1061;Parent=gene1105;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NC_009708.1 RefSeq gene 1282017 1282451 . + . ID=gene1106;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06765;old_locus_tag=YpsIP31758_1078 NC_009708.1 Protein Homology CDS 1282017 1282451 . + 0 ID=cds1062;Parent=gene1106;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NC_009708.1 RefSeq gene 1282541 1284259 . + . ID=gene1107;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06770;old_locus_tag=YpsIP31758_1079 NC_009708.1 Protein Homology CDS 1282541 1284259 . + 0 ID=cds1063;Parent=gene1107;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NC_009708.1 RefSeq gene 1284555 1285250 . + . ID=gene1108;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06775;old_locus_tag=YpsIP31758_1080 NC_009708.1 Protein Homology CDS 1284555 1285250 . + 0 ID=cds1064;Parent=gene1108;Dbxref=Genbank:WP_011192844.1;Name=WP_011192844.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_011192844.1;transl_table=11 NC_009708.1 RefSeq gene 1285272 1285958 . + . ID=gene1109;Name=YPSIP31758_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06780;old_locus_tag=YpsIP31758_1081 NC_009708.1 Protein Homology CDS 1285272 1285958 . + 0 ID=cds1065;Parent=gene1109;Dbxref=Genbank:WP_012104757.1;Name=WP_012104757.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_012104757.1;transl_table=11 NC_009708.1 RefSeq gene 1286084 1286746 . + . ID=gene1110;Name=YPSIP31758_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06785;old_locus_tag=YpsIP31758_1082 NC_009708.1 Protein Homology CDS 1286084 1286746 . + 0 ID=cds1066;Parent=gene1110;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NC_009708.1 RefSeq gene 1286743 1287708 . + . ID=gene1111;Name=YPSIP31758_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06790;old_locus_tag=YpsIP31758_1083 NC_009708.1 Protein Homology CDS 1286743 1287708 . + 0 ID=cds1067;Parent=gene1111;Dbxref=Genbank:WP_011192842.1;Name=WP_011192842.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_011192842.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1287793 1287953 . + . ID=id138;gbkey=repeat_region NC_009708.1 RefSeq gene 1288087 1289079 . + . ID=gene1112;Name=YPSIP31758_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06795;old_locus_tag=YpsIP31758_1084 NC_009708.1 Protein Homology CDS 1288087 1289079 . + 0 ID=cds1068;Parent=gene1112;Dbxref=Genbank:WP_012104759.1;Name=WP_012104759.1;gbkey=CDS;product=urea transporter;protein_id=WP_012104759.1;transl_table=11 NC_009708.1 RefSeq gene 1289228 1290286 . + . ID=gene1113;Name=YPSIP31758_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06800;old_locus_tag=YpsIP31758_1085 NC_009708.1 Protein Homology CDS 1289228 1290286 . + 0 ID=cds1069;Parent=gene1113;Dbxref=Genbank:WP_011192840.1;Name=WP_011192840.1;gbkey=CDS;product=nickel transporter;protein_id=WP_011192840.1;transl_table=11 NC_009708.1 RefSeq gene 1290451 1290780 . - . ID=gene1114;Name=YPSIP31758_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06805;old_locus_tag=YpsIP31758_1086 NC_009708.1 Protein Homology CDS 1290451 1290780 . - 0 ID=cds1070;Parent=gene1114;Dbxref=Genbank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_002212235.1;transl_table=11 NC_009708.1 RefSeq gene 1290779 1291009 . + . ID=gene1115;Name=YPSIP31758_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06810 NC_009708.1 Protein Homology CDS 1290779 1291009 . + 0 ID=cds1071;Parent=gene1115;Dbxref=Genbank:WP_032466576.1;Name=WP_032466576.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466576.1;transl_table=11 NC_009708.1 RefSeq gene 1291399 1292574 . + . ID=gene1116;Name=YPSIP31758_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06815;old_locus_tag=YpsIP31758_1087 NC_009708.1 Protein Homology CDS 1291399 1292574 . + 0 ID=cds1072;Parent=gene1116;Dbxref=Genbank:WP_011192839.1;Name=WP_011192839.1;gbkey=CDS;product=voltage-gated potassium channel TrkA;protein_id=WP_011192839.1;transl_table=11 NC_009708.1 RefSeq gene 1292672 1293076 . - . ID=gene1117;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06820;old_locus_tag=YpsIP31758_1088 NC_009708.1 Protein Homology CDS 1292672 1293076 . - 0 ID=cds1073;Parent=gene1117;Dbxref=Genbank:WP_002212237.1;Name=WP_002212237.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_002212237.1;transl_table=11 NC_009708.1 RefSeq gene 1293092 1293472 . - . ID=gene1118;Name=YPSIP31758_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06825;old_locus_tag=YpsIP31758_1089 NC_009708.1 Protein Homology CDS 1293092 1293472 . - 0 ID=cds1074;Parent=gene1118;Dbxref=Genbank:WP_011192838.1;Name=WP_011192838.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_011192838.1;transl_table=11 NC_009708.1 RefSeq gene 1293561 1293740 . - . ID=gene1119;Name=YPSIP31758_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06830;old_locus_tag=YpsIP31758_1090 NC_009708.1 Protein Homology CDS 1293561 1293740 . - 0 ID=cds1075;Parent=gene1119;Dbxref=Genbank:WP_012104765.1;Name=WP_012104765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104765.1;transl_table=11 NC_009708.1 RefSeq gene 1294513 1294830 . + . ID=gene1120;Name=YPSIP31758_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06835;old_locus_tag=YpsIP31758_1091 NC_009708.1 Protein Homology CDS 1294513 1294830 . + 0 ID=cds1076;Parent=gene1120;Dbxref=Genbank:WP_011192837.1;Name=WP_011192837.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_011192837.1;transl_table=11 NC_009708.1 RefSeq gene 1294841 1296202 . + . ID=gene1121;Name=YPSIP31758_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06840;old_locus_tag=YpsIP31758_1092 NC_009708.1 Protein Homology CDS 1294841 1296202 . + 0 ID=cds1077;Parent=gene1121;Dbxref=Genbank:WP_002212241.1;Name=WP_002212241.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NC_009708.1 RefSeq gene 1296369 1296716 . + . ID=gene1122;Name=YPSIP31758_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06845;old_locus_tag=YpsIP31758_1093 NC_009708.1 Protein Homology CDS 1296369 1296716 . + 0 ID=cds1078;Parent=gene1122;Dbxref=Genbank:WP_012104766.1;Name=WP_012104766.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIA;protein_id=WP_012104766.1;transl_table=11 NC_009708.1 RefSeq gene 1296765 1297595 . + . ID=gene1123;Name=YPSIP31758_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06850;old_locus_tag=YpsIP31758_1094 NC_009708.1 Protein Homology CDS 1296765 1297595 . + 0 ID=cds1079;Parent=gene1123;Dbxref=Genbank:WP_002212243.1;Name=WP_002212243.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212243.1;transl_table=11 NC_009708.1 RefSeq gene 1297647 1298408 . + . ID=gene1124;Name=YPSIP31758_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06855;old_locus_tag=YpsIP31758_1095 NC_009708.1 Protein Homology CDS 1297647 1298408 . + 0 ID=cds1080;Parent=gene1124;Dbxref=Genbank:WP_002212244.1;Name=WP_002212244.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11 NC_009708.1 RefSeq gene 1298415 1298591 . - . ID=gene1125;Name=YPSIP31758_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06860;old_locus_tag=YpsIP31758_1096 NC_009708.1 Protein Homology CDS 1298415 1298591 . - 0 ID=cds1081;Parent=gene1125;Dbxref=Genbank:WP_012104767.1;Name=WP_012104767.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104767.1;transl_table=11 NC_009708.1 RefSeq gene 1298705 1299073 . - . ID=gene1126;Name=YPSIP31758_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06865 NC_009708.1 Protein Homology CDS 1298705 1299073 . - 0 ID=cds1082;Parent=gene1126;Dbxref=Genbank:WP_041175752.1;Name=WP_041175752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175752.1;transl_table=11 NC_009708.1 RefSeq gene 1299568 1300095 . + . ID=gene1127;Name=YPSIP31758_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06870;old_locus_tag=YpsIP31758_1098 NC_009708.1 Protein Homology CDS 1299568 1300095 . + 0 ID=cds1083;Parent=gene1127;Dbxref=Genbank:WP_011192836.1;Name=WP_011192836.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_011192836.1;transl_table=11 NC_009708.1 RefSeq gene 1300168 1301811 . + . ID=gene1128;Name=YPSIP31758_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06875;old_locus_tag=YpsIP31758_1099 NC_009708.1 Protein Homology CDS 1300168 1301811 . + 0 ID=cds1084;Parent=gene1128;Dbxref=Genbank:WP_012104769.1;Name=WP_012104769.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_012104769.1;transl_table=11 NC_009708.1 RefSeq gene 1302029 1302142 . + . ID=gene1129;Name=YPSIP31758_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06880 NC_009708.1 Protein Homology CDS 1302029 1302142 . + 0 ID=cds1085;Parent=gene1129;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11 NC_009708.1 RefSeq gene 1302185 1302427 . + . ID=gene1130;Name=YPSIP31758_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06885;old_locus_tag=YpsIP31758_1100 NC_009708.1 Protein Homology CDS 1302185 1302427 . + 0 ID=cds1086;Parent=gene1130;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NC_009708.1 RefSeq gene 1302555 1302983 . - . ID=gene1131;Name=YPSIP31758_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06890;old_locus_tag=YpsIP31758_1101 NC_009708.1 Protein Homology CDS 1302555 1302983 . - 0 ID=cds1087;Parent=gene1131;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11 NC_009708.1 RefSeq gene 1303078 1303764 . - . ID=gene1132;Name=YPSIP31758_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06895;old_locus_tag=YpsIP31758_1102 NC_009708.1 Protein Homology CDS 1303078 1303764 . - 0 ID=cds1088;Parent=gene1132;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1303815 1304593 . + . ID=id139;gbkey=repeat_region NC_009708.1 RefSeq gene 1304629 1307355 . - . ID=gene1133;Name=YPSIP31758_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06900;old_locus_tag=YpsIP31758_1103 NC_009708.1 Protein Homology CDS 1304629 1307355 . - 0 ID=cds1089;Parent=gene1133;Dbxref=Genbank:WP_012104770.1;Name=WP_012104770.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_012104770.1;transl_table=11 NC_009708.1 RefSeq gene 1307365 1308015 . - . ID=gene1134;Name=YPSIP31758_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06905;old_locus_tag=YpsIP31758_1104 NC_009708.1 Protein Homology CDS 1307365 1308015 . - 0 ID=cds1090;Parent=gene1134;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11 NC_009708.1 RefSeq gene 1308179 1310245 . - . ID=gene1135;Name=YPSIP31758_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06910;old_locus_tag=YpsIP31758_1106 NC_009708.1 Protein Homology CDS 1308179 1310245 . - 0 ID=cds1091;Parent=gene1135;Dbxref=Genbank:WP_012104771.1;Name=WP_012104771.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_012104771.1;transl_table=11 NC_009708.1 RefSeq gene 1310339 1312027 . - . ID=gene1136;Name=YPSIP31758_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06915;old_locus_tag=YpsIP31758_1108 NC_009708.1 Protein Homology CDS 1310339 1312027 . - 0 ID=cds1092;Parent=gene1136;Dbxref=Genbank:WP_012104772.1;Name=WP_012104772.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_012104772.1;transl_table=11 NC_009708.1 RefSeq gene 1312028 1312117 . - . ID=gene1137;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06920 NC_009708.1 Protein Homology CDS 1312028 1312117 . - 0 ID=cds1093;Parent=gene1137;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11 NC_009708.1 RefSeq gene 1312114 1312356 . - . ID=gene1138;Name=YPSIP31758_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06925 NC_009708.1 Protein Homology CDS 1312114 1312356 . - 0 ID=cds1094;Parent=gene1138;Dbxref=Genbank:WP_041175753.1;Name=WP_041175753.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175753.1;transl_table=11 NC_009708.1 RefSeq gene 1312522 1312728 . + . ID=gene1139;Name=YPSIP31758_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06930;old_locus_tag=YpsIP31758_1109 NC_009708.1 Protein Homology CDS 1312522 1312728 . + 0 ID=cds1095;Parent=gene1139;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11 NC_009708.1 RefSeq gene 1313079 1313585 . + . ID=gene1140;Name=YPSIP31758_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06935;old_locus_tag=YpsIP31758_1111 NC_009708.1 Protein Homology CDS 1313079 1313585 . + 0 ID=cds1096;Parent=gene1140;Dbxref=Genbank:WP_012104774.1;Name=WP_012104774.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104774.1;transl_table=11 NC_009708.1 RefSeq gene 1313691 1315154 . + . ID=gene1141;Name=YPSIP31758_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06940;old_locus_tag=YpsIP31758_1112 NC_009708.1 Protein Homology CDS 1313691 1315154 . + 0 ID=cds1097;Parent=gene1141;Dbxref=Genbank:WP_012104775.1;Name=WP_012104775.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_012104775.1;transl_table=11 NC_009708.1 RefSeq gene 1315145 1316182 . + . ID=gene1142;Name=YPSIP31758_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06945;old_locus_tag=YpsIP31758_1113 NC_009708.1 Protein Homology CDS 1315145 1316182 . + 0 ID=cds1098;Parent=gene1142;Dbxref=Genbank:WP_012104776.1;Name=WP_012104776.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_012104776.1;transl_table=11 NC_009708.1 RefSeq gene 1316325 1317068 . + . ID=gene1143;Name=YPSIP31758_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06950;old_locus_tag=YpsIP31758_1114 NC_009708.1 Protein Homology CDS 1316325 1317068 . + 0 ID=cds1099;Parent=gene1143;Dbxref=Genbank:WP_025471060.1;Name=WP_025471060.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_025471060.1;transl_table=11 NC_009708.1 RefSeq gene 1317688 1318344 . + . ID=gene1144;Name=YPSIP31758_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06955;old_locus_tag=YpsIP31758_1115 NC_009708.1 Protein Homology CDS 1317688 1318344 . + 0 ID=cds1100;Parent=gene1144;Dbxref=Genbank:WP_011192830.1;Name=WP_011192830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192830.1;transl_table=11 NC_009708.1 RefSeq gene 1318338 1319288 . + . ID=gene1145;Name=YPSIP31758_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06960;old_locus_tag=YpsIP31758_1116 NC_009708.1 Protein Homology CDS 1318338 1319288 . + 0 ID=cds1101;Parent=gene1145;Dbxref=Genbank:WP_012104777.1;Name=WP_012104777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104777.1;transl_table=11 NC_009708.1 RefSeq gene 1319285 1320022 . + . ID=gene1146;Name=YPSIP31758_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06965;old_locus_tag=YpsIP31758_1117 NC_009708.1 Protein Homology CDS 1319285 1320022 . + 0 ID=cds1102;Parent=gene1146;Dbxref=Genbank:WP_002209659.1;Name=WP_002209659.1;gbkey=CDS;product=LamB/YcsF family protein;protein_id=WP_002209659.1;transl_table=11 NC_009708.1 RefSeq gene 1320107 1320838 . + . ID=gene1147;Name=YPSIP31758_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06970;old_locus_tag=YpsIP31758_1118 NC_009708.1 Protein Homology CDS 1320107 1320838 . + 0 ID=cds1103;Parent=gene1147;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11 NC_009708.1 RefSeq gene 1320835 1321854 . + . ID=gene1148;Name=YPSIP31758_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06975;old_locus_tag=YpsIP31758_1119 NC_009708.1 Protein Homology CDS 1320835 1321854 . + 0 ID=cds1104;Parent=gene1148;Dbxref=Genbank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209661.1;transl_table=11 NC_009708.1 RefSeq gene 1321864 1322511 . + . ID=gene1149;Name=YPSIP31758_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06980;old_locus_tag=YpsIP31758_1120 NC_009708.1 Protein Homology CDS 1321864 1322511 . + 0 ID=cds1105;Parent=gene1149;Dbxref=Genbank:WP_012104778.1;Name=WP_012104778.1;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=WP_012104778.1;transl_table=11 NC_009708.1 RefSeq gene 1322602 1323288 . - . ID=gene1150;Name=YPSIP31758_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06985;old_locus_tag=YpsIP31758_1121 NC_009708.1 Protein Homology CDS 1322602 1323288 . - 0 ID=cds1106;Parent=gene1150;Dbxref=Genbank:WP_012104779.1;Name=WP_012104779.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_012104779.1;transl_table=11 NC_009708.1 RefSeq gene 1323641 1324024 . + . ID=gene1151;Name=YPSIP31758_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06990;old_locus_tag=YpsIP31758_1122 NC_009708.1 Protein Homology CDS 1323641 1324024 . + 0 ID=cds1107;Parent=gene1151;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NC_009708.1 RefSeq gene 1324203 1325165 . + . ID=gene1152;Name=YPSIP31758_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS06995;old_locus_tag=YpsIP31758_1123 NC_009708.1 Protein Homology CDS 1324203 1325165 . + 0 ID=cds1108;Parent=gene1152;Dbxref=Genbank:WP_012104780.1;Name=WP_012104780.1;gbkey=CDS;product=phospholipase A;protein_id=WP_012104780.1;transl_table=11 NC_009708.1 RefSeq gene 1325158 1325262 . + . ID=gene1153;Name=YPSIP31758_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07000 NC_009708.1 Protein Homology CDS 1325158 1325262 . + 0 ID=cds1109;Parent=gene1153;Dbxref=Genbank:WP_041175754.1;Name=WP_041175754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175754.1;transl_table=11 NC_009708.1 RefSeq gene 1325249 1325905 . + . ID=gene1154;Name=YPSIP31758_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07005;old_locus_tag=YpsIP31758_1125 NC_009708.1 Protein Homology CDS 1325249 1325905 . + 0 ID=cds1110;Parent=gene1154;Dbxref=Genbank:WP_012104782.1;Name=WP_012104782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104782.1;transl_table=11 NC_009708.1 RefSeq gene 1326036 1327361 . - . ID=gene1155;Name=YPSIP31758_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07010;old_locus_tag=YpsIP31758_1126 NC_009708.1 Protein Homology CDS 1326036 1327361 . - 0 ID=cds1111;Parent=gene1155;Dbxref=Genbank:WP_012104783.1;Name=WP_012104783.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=RNA helicase;protein_id=WP_012104783.1;transl_table=11 NC_009708.1 RefSeq gene 1327613 1328359 . + . ID=gene1156;Name=YPSIP31758_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07015;old_locus_tag=YpsIP31758_1127 NC_009708.1 Protein Homology CDS 1327613 1328359 . + 0 ID=cds1112;Parent=gene1156;Dbxref=Genbank:WP_002209670.1;Name=WP_002209670.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002209670.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1328427 1328603 . + . ID=id140;gbkey=repeat_region NC_009708.1 RefSeq gene 1328642 1330279 . - . ID=gene1157;Name=YPSIP31758_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07020;old_locus_tag=YpsIP31758_1128 NC_009708.1 Protein Homology CDS 1328642 1330279 . - 0 ID=cds1113;Parent=gene1157;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11 NC_009708.1 RefSeq gene 1330467 1331042 . + . ID=gene1158;Name=YPSIP31758_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07025;old_locus_tag=YpsIP31758_1129 NC_009708.1 Protein Homology CDS 1330467 1331042 . + 0 ID=cds1114;Parent=gene1158;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11 NC_009708.1 RefSeq gene 1331068 1331724 . + . ID=gene1159;Name=YPSIP31758_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07030;old_locus_tag=YpsIP31758_1130 NC_009708.1 Protein Homology CDS 1331068 1331724 . + 0 ID=cds1115;Parent=gene1159;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11 NC_009708.1 RefSeq gene 1331724 1332680 . + . ID=gene1160;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07035;old_locus_tag=YpsIP31758_1131 NC_009708.1 Protein Homology CDS 1331724 1332680 . + 0 ID=cds1116;Parent=gene1160;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11 NC_009708.1 RefSeq gene 1332677 1333132 . + . ID=gene1161;Name=YPSIP31758_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07040;old_locus_tag=YpsIP31758_1132 NC_009708.1 Protein Homology CDS 1332677 1333132 . + 0 ID=cds1117;Parent=gene1161;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NC_009708.1 RefSeq gene 1333153 1334007 . - . ID=gene1162;Name=YPSIP31758_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07045;old_locus_tag=YpsIP31758_1133 NC_009708.1 Protein Homology CDS 1333153 1334007 . - 0 ID=cds1118;Parent=gene1162;Dbxref=Genbank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209676.1;transl_table=11 NC_009708.1 RefSeq gene 1334507 1336306 . + . ID=gene1163;Name=YPSIP31758_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07050;old_locus_tag=YpsIP31758_1134 NC_009708.1 Protein Homology CDS 1334507 1336306 . + 0 ID=cds1119;Parent=gene1163;Dbxref=Genbank:WP_002209677.1;Name=WP_002209677.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NC_009708.1 RefSeq gene 1336316 1337314 . + . ID=gene1164;Name=YPSIP31758_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07055;old_locus_tag=YpsIP31758_1135 NC_009708.1 Protein Homology CDS 1336316 1337314 . + 0 ID=cds1120;Parent=gene1164;Dbxref=Genbank:WP_012104784.1;Name=WP_012104784.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase;protein_id=WP_012104784.1;transl_table=11 NC_009708.1 RefSeq gene 1337666 1338346 . + . ID=gene1165;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07060;old_locus_tag=YpsIP31758_1136 NC_009708.1 Protein Homology CDS 1337666 1338346 . + 0 ID=cds1121;Parent=gene1165;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11 NC_009708.1 RefSeq gene 1338343 1339254 . + . ID=gene1166;Name=YPSIP31758_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07065;old_locus_tag=YpsIP31758_1137 NC_009708.1 Protein Homology CDS 1338343 1339254 . + 0 ID=cds1122;Parent=gene1166;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NC_009708.1 RefSeq gene 1339264 1339989 . + . ID=gene1167;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07070;old_locus_tag=YpsIP31758_1138 NC_009708.1 Protein Homology CDS 1339264 1339989 . + 0 ID=cds1123;Parent=gene1167;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NC_009708.1 RefSeq gene 1340148 1340879 . + . ID=gene1168;Name=YPSIP31758_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07075;old_locus_tag=YpsIP31758_1139 NC_009708.1 Protein Homology CDS 1340148 1340879 . + 0 ID=cds1124;Parent=gene1168;Dbxref=Genbank:WP_012104785.1;Name=WP_012104785.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_012104785.1;transl_table=11 NC_009708.1 RefSeq gene 1340879 1341259 . + . ID=gene1169;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07080;old_locus_tag=YpsIP31758_1140 NC_009708.1 Protein Homology CDS 1340879 1341259 . + 0 ID=cds1125;Parent=gene1169;Dbxref=Genbank:WP_011192825.1;Name=WP_011192825.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_011192825.1;transl_table=11 NC_009708.1 RefSeq gene 1341365 1341625 . - . ID=gene1170;Name=YPSIP31758_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07085;old_locus_tag=YpsIP31758_1141 NC_009708.1 Protein Homology CDS 1341365 1341625 . - 0 ID=cds1126;Parent=gene1170;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11 NC_009708.1 RefSeq gene 1341787 1342626 . - . ID=gene1171;Name=YPSIP31758_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07090;old_locus_tag=YpsIP31758_1142 NC_009708.1 Protein Homology CDS 1341787 1342626 . - 0 ID=cds1127;Parent=gene1171;Dbxref=Genbank:WP_002211566.1;Name=WP_002211566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NC_009708.1 RefSeq gene 1342834 1343721 . + . ID=gene1172;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=YPSIP31758_RS07095;old_locus_tag=YpsIP31758_1143 NC_009708.1 Protein Homology CDS 1342834 1343721 . + 0 ID=cds1128;Parent=gene1172;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NC_009708.1 RefSeq gene 1343948 1344643 . + . ID=gene1173;Name=YPSIP31758_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07100;old_locus_tag=YpsIP31758_1144 NC_009708.1 Protein Homology CDS 1343948 1344643 . + 0 ID=cds1129;Parent=gene1173;Dbxref=Genbank:WP_002211564.1;Name=WP_002211564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211564.1;transl_table=11 NC_009708.1 RefSeq gene 1344714 1345316 . + . ID=gene1174;Name=YPSIP31758_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07105;old_locus_tag=YpsIP31758_1145 NC_009708.1 Protein Homology CDS 1344714 1345316 . + 0 ID=cds1130;Parent=gene1174;Dbxref=Genbank:WP_012104787.1;Name=WP_012104787.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_012104787.1;transl_table=11 NC_009708.1 RefSeq gene 1345443 1346903 . - . ID=gene1175;Name=YPSIP31758_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07110;old_locus_tag=YpsIP31758_1146 NC_009708.1 Protein Homology CDS 1345443 1346903 . - 0 ID=cds1131;Parent=gene1175;Dbxref=Genbank:WP_002211562.1;Name=WP_002211562.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002211562.1;transl_table=11 NC_009708.1 RefSeq gene 1347219 1351109 . + . ID=gene1176;Name=YPSIP31758_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07115;old_locus_tag=YpsIP31758_1147 NC_009708.1 Protein Homology CDS 1347219 1351109 . + 0 ID=cds1132;Parent=gene1176;Dbxref=Genbank:WP_011192822.1;Name=WP_011192822.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_011192822.1;transl_table=11 NC_009708.1 RefSeq gene 1351350 1351799 . - . ID=gene1177;Name=YPSIP31758_RS07120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS07120;pseudo=true NC_009708.1 Protein Homology CDS 1351350 1351799 . - 0 ID=cds1133;Parent=gene1177;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1351554..1351556)%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 1352251 1352811 . - . ID=gene1178;Name=YPSIP31758_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07125;old_locus_tag=YpsIP31758_1149 NC_009708.1 Protein Homology CDS 1352251 1352811 . - 0 ID=cds1134;Parent=gene1178;Dbxref=Genbank:WP_011192821.1;Name=WP_011192821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192821.1;transl_table=11 NC_009708.1 RefSeq gene 1353391 1353555 . - . ID=gene1179;Name=YPSIP31758_RS22440;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22440 NC_009708.1 RefSeq transcript 1353391 1353555 . - . ID=rna43;Parent=gene1179;gbkey=misc_RNA;product=tke1 RNA NC_009708.1 RefSeq exon 1353391 1353555 . - . ID=id141;Parent=rna43;gbkey=misc_RNA;product=tke1 RNA NC_009708.1 RefSeq gene 1354006 1355442 . + . ID=gene1180;Name=YPSIP31758_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07130;old_locus_tag=YpsIP31758_1150 NC_009708.1 Protein Homology CDS 1354006 1355442 . + 0 ID=cds1135;Parent=gene1180;Dbxref=Genbank:WP_002216114.1;Name=WP_002216114.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11 NC_009708.1 RefSeq gene 1355446 1356498 . + . ID=gene1181;Name=YPSIP31758_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07135;old_locus_tag=YpsIP31758_1151 NC_009708.1 Protein Homology CDS 1355446 1356498 . + 0 ID=cds1136;Parent=gene1181;Dbxref=Genbank:WP_012104789.1;Name=WP_012104789.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104789.1;transl_table=11 NC_009708.1 RefSeq gene 1356461 1357798 . + . ID=gene1182;Name=YPSIP31758_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07140;old_locus_tag=YpsIP31758_1152 NC_009708.1 Protein Homology CDS 1356461 1357798 . + 0 ID=cds1137;Parent=gene1182;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11 NC_009708.1 RefSeq gene 1357958 1359580 . + . ID=gene1183;Name=YPSIP31758_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07145;old_locus_tag=YpsIP31758_1154 NC_009708.1 Protein Homology CDS 1357958 1359580 . + 0 ID=cds1138;Parent=gene1183;Dbxref=Genbank:WP_012104790.1;Name=WP_012104790.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_012104790.1;transl_table=11 NC_009708.1 RefSeq gene 1359595 1359933 . + . ID=gene1184;Name=YPSIP31758_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07150;old_locus_tag=YpsIP31758_1155 NC_009708.1 Protein Homology CDS 1359595 1359933 . + 0 ID=cds1139;Parent=gene1184;Dbxref=Genbank:WP_002231018.1;Name=WP_002231018.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002231018.1;transl_table=11 NC_009708.1 RefSeq gene 1360130 1361029 . - . ID=gene1185;Name=YPSIP31758_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07155;old_locus_tag=YpsIP31758_1156 NC_009708.1 Protein Homology CDS 1360130 1361029 . - 0 ID=cds1140;Parent=gene1185;Dbxref=Genbank:WP_011192818.1;Name=WP_011192818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192818.1;transl_table=11 NC_009708.1 RefSeq gene 1361493 1362683 . - . ID=gene1186;Name=YPSIP31758_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07160;old_locus_tag=YpsIP31758_1157 NC_009708.1 Protein Homology CDS 1361493 1362683 . - 0 ID=cds1141;Parent=gene1186;Dbxref=Genbank:WP_012104791.1;Name=WP_012104791.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2;protein_id=WP_012104791.1;transl_table=11 NC_009708.1 RefSeq gene 1363224 1364477 . + . ID=gene1187;Name=YPSIP31758_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07165;old_locus_tag=YpsIP31758_1158 NC_009708.1 Protein Homology CDS 1363224 1364477 . + 0 ID=cds1142;Parent=gene1187;Dbxref=Genbank:WP_012104792.1;Name=WP_012104792.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_012104792.1;transl_table=11 NC_009708.1 RefSeq gene 1364629 1364811 . + . ID=gene1188;Name=YPSIP31758_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07170;old_locus_tag=YpsIP31758_1159 NC_009708.1 Protein Homology CDS 1364629 1364811 . + 0 ID=cds1143;Parent=gene1188;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11 NC_009708.1 RefSeq gene 1364929 1365468 . + . ID=gene1189;Name=YPSIP31758_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07175;old_locus_tag=YpsIP31758_1160 NC_009708.1 Protein Homology CDS 1364929 1365468 . + 0 ID=cds1144;Parent=gene1189;Dbxref=Genbank:WP_012104793.1;Name=WP_012104793.1;gbkey=CDS;product=attachment protein;protein_id=WP_012104793.1;transl_table=11 NC_009708.1 RefSeq gene 1365838 1366995 . + . ID=gene1190;Name=YPSIP31758_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07180;old_locus_tag=YpsIP31758_1162 NC_009708.1 Protein Homology CDS 1365838 1366995 . + 0 ID=cds1145;Parent=gene1190;Dbxref=Genbank:WP_002213316.1;Name=WP_002213316.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=WP_002213316.1;transl_table=11 NC_009708.1 RefSeq gene 1366992 1368353 . - . ID=gene1191;Name=YPSIP31758_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07185;old_locus_tag=YpsIP31758_1161 NC_009708.1 Protein Homology CDS 1366992 1368353 . - 0 ID=cds1146;Parent=gene1191;Dbxref=Genbank:WP_002213314.1;Name=WP_002213314.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_002213314.1;transl_table=11 NC_009708.1 RefSeq gene 1368495 1369169 . + . ID=gene1192;Name=YPSIP31758_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07190;old_locus_tag=YpsIP31758_1163 NC_009708.1 Protein Homology CDS 1368495 1369169 . + 0 ID=cds1147;Parent=gene1192;Dbxref=Genbank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213310.1;transl_table=11 NC_009708.1 RefSeq gene 1369160 1370182 . + . ID=gene1193;Name=YPSIP31758_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07195;old_locus_tag=YpsIP31758_1164 NC_009708.1 Protein Homology CDS 1369160 1370182 . + 0 ID=cds1148;Parent=gene1193;Dbxref=Genbank:WP_002213308.1;Name=WP_002213308.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002213308.1;transl_table=11 NC_009708.1 RefSeq gene 1370281 1371084 . - . ID=gene1194;Name=YPSIP31758_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07200;old_locus_tag=YpsIP31758_1165 NC_009708.1 Protein Homology CDS 1370281 1371084 . - 0 ID=cds1149;Parent=gene1194;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11 NC_009708.1 RefSeq gene 1371203 1371976 . + . ID=gene1195;Name=YPSIP31758_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07205;old_locus_tag=YpsIP31758_1166 NC_009708.1 Protein Homology CDS 1371203 1371976 . + 0 ID=cds1150;Parent=gene1195;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NC_009708.1 RefSeq gene 1372132 1372626 . + . ID=gene1196;Name=YPSIP31758_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07210;old_locus_tag=YpsIP31758_1167 NC_009708.1 Protein Homology CDS 1372132 1372626 . + 0 ID=cds1151;Parent=gene1196;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NC_009708.1 RefSeq gene 1372680 1373909 . + . ID=gene1197;Name=YPSIP31758_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07215;old_locus_tag=YpsIP31758_1168 NC_009708.1 Protein Homology CDS 1372680 1373909 . + 0 ID=cds1152;Parent=gene1197;Dbxref=Genbank:WP_011192814.1;Name=WP_011192814.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_011192814.1;transl_table=11 NC_009708.1 RefSeq gene 1373940 1374326 . + . ID=gene1198;Name=YPSIP31758_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07220;old_locus_tag=YpsIP31758_1169 NC_009708.1 Protein Homology CDS 1373940 1374326 . + 0 ID=cds1153;Parent=gene1198;Dbxref=Genbank:WP_002209835.1;Name=WP_002209835.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NC_009708.1 RefSeq gene 1374596 1374919 . + . ID=gene1199;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07225;old_locus_tag=YpsIP31758_1170 NC_009708.1 Protein Homology CDS 1374596 1374919 . + 0 ID=cds1154;Parent=gene1199;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11 NC_009708.1 RefSeq gene 1375032 1375556 . + . ID=gene1200;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07230;old_locus_tag=YpsIP31758_1171 NC_009708.1 Protein Homology CDS 1375032 1375556 . + 0 ID=cds1155;Parent=gene1200;Dbxref=Genbank:WP_011192812.1;Name=WP_011192812.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_011192812.1;transl_table=11 NC_009708.1 RefSeq gene 1375799 1377733 . + . ID=gene1201;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07235;old_locus_tag=YpsIP31758_1172 NC_009708.1 Protein Homology CDS 1375799 1377733 . + 0 ID=cds1156;Parent=gene1201;Dbxref=Genbank:WP_012104797.1;Name=WP_012104797.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_012104797.1;transl_table=11 NC_009708.1 RefSeq gene 1377736 1378071 . + . ID=gene1202;Name=YPSIP31758_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07240;old_locus_tag=YpsIP31758_1173 NC_009708.1 Protein Homology CDS 1377736 1378071 . + 0 ID=cds1157;Parent=gene1202;Dbxref=Genbank:WP_002209831.1;Name=WP_002209831.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002209831.1;transl_table=11 NC_009708.1 RefSeq gene 1378101 1378301 . + . ID=gene1203;Name=YPSIP31758_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07245;old_locus_tag=YpsIP31758_1174 NC_009708.1 Protein Homology CDS 1378101 1378301 . + 0 ID=cds1158;Parent=gene1203;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11 NC_009708.1 RefSeq gene 1378441 1379739 . + . ID=gene1204;Name=YPSIP31758_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07250;old_locus_tag=YpsIP31758_1175 NC_009708.1 Protein Homology CDS 1378441 1379739 . + 0 ID=cds1159;Parent=gene1204;Dbxref=Genbank:WP_012104798.1;Name=WP_012104798.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_012104798.1;transl_table=11 NC_009708.1 RefSeq gene 1379818 1380735 . + . ID=gene1205;Name=YPSIP31758_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07255;old_locus_tag=YpsIP31758_1176 NC_009708.1 Protein Homology CDS 1379818 1380735 . + 0 ID=cds1160;Parent=gene1205;Dbxref=Genbank:WP_012104799.1;Name=WP_012104799.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_012104799.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1380771 1380941 . + . ID=id142;gbkey=repeat_region NC_009708.1 RefSeq gene 1381005 1384358 . - . ID=gene1206;Name=YPSIP31758_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07260;old_locus_tag=YpsIP31758_1177 NC_009708.1 Protein Homology CDS 1381005 1384358 . - 0 ID=cds1161;Parent=gene1206;Dbxref=Genbank:WP_012104800.1;Name=WP_012104800.1;gbkey=CDS;product=pertactin;protein_id=WP_012104800.1;transl_table=11 NC_009708.1 RefSeq gene 1384916 1389541 . - . ID=gene1207;Name=YPSIP31758_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07265;old_locus_tag=YpsIP31758_1179 NC_009708.1 Protein Homology CDS 1384916 1389541 . - 0 ID=cds1162;Parent=gene1207;Dbxref=Genbank:WP_012104803.1;Name=WP_012104803.1;gbkey=CDS;product=autotransporter;protein_id=WP_012104803.1;transl_table=11 NC_009708.1 RefSeq gene 1389825 1390082 . - . ID=gene1208;Name=YPSIP31758_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07270 NC_009708.1 Protein Homology CDS 1389825 1390082 . - 0 ID=cds1163;Parent=gene1208;Dbxref=Genbank:WP_041175755.1;Name=WP_041175755.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175755.1;transl_table=11 NC_009708.1 RefSeq gene 1390257 1392677 . + . ID=gene1209;Name=YPSIP31758_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07275;old_locus_tag=YpsIP31758_1181 NC_009708.1 Protein Homology CDS 1390257 1392677 . + 0 ID=cds1164;Parent=gene1209;Dbxref=Genbank:WP_012104804.1;Name=WP_012104804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104804.1;transl_table=11 NC_009708.1 RefSeq gene 1393004 1393432 . + . ID=gene1210;Name=YPSIP31758_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07280;old_locus_tag=YpsIP31758_1182 NC_009708.1 Protein Homology CDS 1393004 1393432 . + 0 ID=cds1165;Parent=gene1210;Dbxref=Genbank:WP_012104805.1;Name=WP_012104805.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_012104805.1;transl_table=11 NC_009708.1 RefSeq gene 1393694 1394890 . + . ID=gene1211;Name=YPSIP31758_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07285;old_locus_tag=YpsIP31758_1183 NC_009708.1 Protein Homology CDS 1393694 1394890 . + 0 ID=cds1166;Parent=gene1211;Dbxref=Genbank:WP_012104806.1;Name=WP_012104806.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_012104806.1;transl_table=11 NC_009708.1 RefSeq gene 1395044 1395793 . + . ID=gene1212;Name=YPSIP31758_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07290;old_locus_tag=YpsIP31758_1184 NC_009708.1 Protein Homology CDS 1395044 1395793 . + 0 ID=cds1167;Parent=gene1212;Dbxref=Genbank:WP_011192803.1;Name=WP_011192803.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_011192803.1;transl_table=11 NC_009708.1 RefSeq gene 1395783 1396874 . + . ID=gene1213;Name=YPSIP31758_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07295;old_locus_tag=YpsIP31758_1185 NC_009708.1 Protein Homology CDS 1395783 1396874 . + 0 ID=cds1168;Parent=gene1213;Dbxref=Genbank:WP_012104807.1;Name=WP_012104807.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_012104807.1;transl_table=11 NC_009708.1 RefSeq gene 1396978 1398105 . + . ID=gene1214;Name=YPSIP31758_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07300;old_locus_tag=YpsIP31758_1186 NC_009708.1 Protein Homology CDS 1396978 1398105 . + 0 ID=cds1169;Parent=gene1214;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11 NC_009708.1 RefSeq gene 1398314 1399588 . + . ID=gene1215;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07305;old_locus_tag=YpsIP31758_1187 NC_009708.1 Protein Homology CDS 1398314 1399588 . + 0 ID=cds1170;Parent=gene1215;Dbxref=Genbank:WP_012104808.1;Name=WP_012104808.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_012104808.1;transl_table=11 NC_009708.1 RefSeq gene 1399602 1400237 . + . ID=gene1216;Name=YPSIP31758_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07310;old_locus_tag=YpsIP31758_1188 NC_009708.1 Protein Homology CDS 1399602 1400237 . + 0 ID=cds1171;Parent=gene1216;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11 NC_009708.1 RefSeq gene 1400249 1401430 . + . ID=gene1217;Name=YPSIP31758_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07315;old_locus_tag=YpsIP31758_1189 NC_009708.1 Protein Homology CDS 1400249 1401430 . + 0 ID=cds1172;Parent=gene1217;Dbxref=Genbank:WP_011192801.1;Name=WP_011192801.1;gbkey=CDS;product=outer membrane biogenesis protein BamB;protein_id=WP_011192801.1;transl_table=11 NC_009708.1 RefSeq gene 1401578 1403065 . + . ID=gene1218;Name=YPSIP31758_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07320;old_locus_tag=YpsIP31758_1190 NC_009708.1 Protein Homology CDS 1401578 1403065 . + 0 ID=cds1173;Parent=gene1218;Dbxref=Genbank:WP_002209813.1;Name=WP_002209813.1;gbkey=CDS;product=GTPase Der;protein_id=WP_002209813.1;transl_table=11 NC_009708.1 RefSeq gene 1403434 1404390 . + . ID=gene1219;Name=YPSIP31758_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07325;old_locus_tag=YpsIP31758_1191 NC_009708.1 Protein Homology CDS 1403434 1404390 . + 0 ID=cds1174;Parent=gene1219;Dbxref=Genbank:WP_012104809.1;Name=WP_012104809.1;gbkey=CDS;product=transporter;protein_id=WP_012104809.1;transl_table=11 NC_009708.1 RefSeq gene 1404439 1404663 . + . ID=gene1220;Name=YPSIP31758_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07330;old_locus_tag=YpsIP31758_1192 NC_009708.1 Protein Homology CDS 1404439 1404663 . + 0 ID=cds1175;Parent=gene1220;Dbxref=Genbank:WP_011192798.1;Name=WP_011192798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192798.1;transl_table=11 NC_009708.1 RefSeq gene 1404750 1406126 . - . ID=gene1221;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07335;old_locus_tag=YpsIP31758_1193 NC_009708.1 Protein Homology CDS 1404750 1406126 . - 0 ID=cds1176;Parent=gene1221;Dbxref=Genbank:WP_012104810.1;Name=WP_012104810.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_012104810.1;transl_table=11 NC_009708.1 RefSeq gene 1406296 1407759 . + . ID=gene1222;Name=YPSIP31758_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07340;old_locus_tag=YpsIP31758_1194 NC_009708.1 Protein Homology CDS 1406296 1407759 . + 0 ID=cds1177;Parent=gene1222;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NC_009708.1 RefSeq gene 1407831 1407956 . - . ID=gene1223;Name=YPSIP31758_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07345;old_locus_tag=YpsIP31758_1195 NC_009708.1 Protein Homology CDS 1407831 1407956 . - 0 ID=cds1178;Parent=gene1223;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11 NC_009708.1 RefSeq gene 1407939 1409516 . + . ID=gene1224;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07350;old_locus_tag=YpsIP31758_1196 NC_009708.1 Protein Homology CDS 1407939 1409516 . + 0 ID=cds1179;Parent=gene1224;Dbxref=Genbank:WP_011192796.1;Name=WP_011192796.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_011192796.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1409585 1409895 . + . ID=id143;gbkey=repeat_region NC_009708.1 RefSeq gene 1409955 1410434 . - . ID=gene1225;Name=YPSIP31758_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07355;old_locus_tag=YpsIP31758_1198 NC_009708.1 Protein Homology CDS 1409955 1410434 . - 0 ID=cds1180;Parent=gene1225;Dbxref=Genbank:WP_011192795.1;Name=WP_011192795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192795.1;transl_table=11 NC_009708.1 RefSeq gene 1410458 1410856 . - . ID=gene1226;Name=YPSIP31758_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07360;old_locus_tag=YpsIP31758_1199 NC_009708.1 Protein Homology CDS 1410458 1410856 . - 0 ID=cds1181;Parent=gene1226;Dbxref=Genbank:WP_012104812.1;Name=WP_012104812.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104812.1;transl_table=11 NC_009708.1 RefSeq gene 1410918 1411313 . - . ID=gene1227;Name=YPSIP31758_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07365 NC_009708.1 Protein Homology CDS 1410918 1411313 . - 0 ID=cds1182;Parent=gene1227;Dbxref=Genbank:WP_033849904.1;Name=WP_033849904.1;gbkey=CDS;product=membrane protein;protein_id=WP_033849904.1;transl_table=11 NC_009708.1 RefSeq gene 1411372 1411767 . - . ID=gene1228;Name=YPSIP31758_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07370 NC_009708.1 Protein Homology CDS 1411372 1411767 . - 0 ID=cds1183;Parent=gene1228;Dbxref=Genbank:WP_033849906.1;Name=WP_033849906.1;gbkey=CDS;product=membrane protein;protein_id=WP_033849906.1;transl_table=11 NC_009708.1 RefSeq gene 1411764 1412645 . - . ID=gene1229;Name=YPSIP31758_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07375 NC_009708.1 Protein Homology CDS 1411764 1412645 . - 0 ID=cds1184;Parent=gene1229;Dbxref=Genbank:WP_012104813.1;Name=WP_012104813.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104813.1;transl_table=11 NC_009708.1 RefSeq gene 1412743 1413219 . - . ID=gene1230;Name=YPSIP31758_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07385;old_locus_tag=YpsIP31758_1201 NC_009708.1 Protein Homology CDS 1412743 1413219 . - 0 ID=cds1185;Parent=gene1230;Dbxref=Genbank:WP_025380838.1;Name=WP_025380838.1;gbkey=CDS;product=membrane protein;protein_id=WP_025380838.1;transl_table=11 NC_009708.1 RefSeq gene 1413200 1414048 . - . ID=gene1231;Name=YPSIP31758_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07390;old_locus_tag=YpsIP31758_1202 NC_009708.1 Protein Homology CDS 1413200 1414048 . - 0 ID=cds1186;Parent=gene1231;Dbxref=Genbank:WP_012104815.1;Name=WP_012104815.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104815.1;transl_table=11 NC_009708.1 RefSeq gene 1414643 1415443 . + . ID=gene1232;Name=YPSIP31758_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07395;old_locus_tag=YpsIP31758_1203 NC_009708.1 Protein Homology CDS 1414643 1415443 . + 0 ID=cds1187;Parent=gene1232;Dbxref=Genbank:WP_012104816.1;Name=WP_012104816.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_012104816.1;transl_table=11 NC_009708.1 RefSeq gene 1415471 1416391 . - . ID=gene1233;Name=YPSIP31758_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07400;old_locus_tag=YpsIP31758_1204 NC_009708.1 Protein Homology CDS 1415471 1416391 . - 0 ID=cds1188;Parent=gene1233;Dbxref=Genbank:WP_012104817.1;Name=WP_012104817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104817.1;transl_table=11 NC_009708.1 RefSeq gene 1416622 1417131 . + . ID=gene1234;Name=YPSIP31758_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07405;old_locus_tag=YpsIP31758_1206 NC_009708.1 Protein Homology CDS 1416622 1417131 . + 0 ID=cds1189;Parent=gene1234;Dbxref=Genbank:WP_012104818.1;Name=WP_012104818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104818.1;transl_table=11 NC_009708.1 RefSeq gene 1417418 1418308 . - . ID=gene1235;Name=YPSIP31758_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07410;old_locus_tag=YpsIP31758_1207 NC_009708.1 Protein Homology CDS 1417418 1418308 . - 0 ID=cds1190;Parent=gene1235;Dbxref=Genbank:WP_002209799.1;Name=WP_002209799.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_002209799.1;transl_table=11 NC_009708.1 RefSeq gene 1418759 1418844 . - . ID=gene1236;Name=YPSIP31758_RS22445;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22445 NC_009708.1 RefSeq transcript 1418759 1418844 . - . ID=rna44;Parent=gene1236;gbkey=misc_RNA;product=RyeE RNA NC_009708.1 RefSeq exon 1418759 1418844 . - . ID=id144;Parent=rna44;gbkey=misc_RNA;product=RyeE RNA NC_009708.1 RefSeq gene 1418946 1420340 . - . ID=gene1237;Name=YPSIP31758_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07415;old_locus_tag=YpsIP31758_1208 NC_009708.1 Protein Homology CDS 1418946 1420340 . - 0 ID=cds1191;Parent=gene1237;Dbxref=Genbank:WP_012104819.1;Name=WP_012104819.1;gbkey=CDS;product=protease;protein_id=WP_012104819.1;transl_table=11 NC_009708.1 RefSeq gene 1420638 1420976 . - . ID=gene1238;Name=YPSIP31758_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07420;old_locus_tag=YpsIP31758_1209 NC_009708.1 Protein Homology CDS 1420638 1420976 . - 0 ID=cds1192;Parent=gene1238;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11 NC_009708.1 RefSeq gene 1421113 1421832 . - . ID=gene1239;Name=YPSIP31758_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07425;old_locus_tag=YpsIP31758_1210 NC_009708.1 Protein Homology CDS 1421113 1421832 . - 0 ID=cds1193;Parent=gene1239;Dbxref=Genbank:WP_011192786.1;Name=WP_011192786.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_011192786.1;transl_table=11 NC_009708.1 RefSeq gene 1421842 1423224 . - . ID=gene1240;Name=YPSIP31758_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07430;old_locus_tag=YpsIP31758_1211 NC_009708.1 Protein Homology CDS 1421842 1423224 . - 0 ID=cds1194;Parent=gene1240;Dbxref=Genbank:WP_041175852.1;Name=WP_041175852.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_041175852.1;transl_table=11 NC_009708.1 RefSeq gene 1423258 1424655 . - . ID=gene1241;Name=YPSIP31758_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07435;old_locus_tag=YpsIP31758_1212 NC_009708.1 Protein Homology CDS 1423258 1424655 . - 0 ID=cds1195;Parent=gene1241;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11 NC_009708.1 RefSeq gene 1424689 1427763 . - . ID=gene1242;Name=YPSIP31758_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07440;old_locus_tag=YpsIP31758_1213 NC_009708.1 Protein Homology CDS 1424689 1427763 . - 0 ID=cds1196;Parent=gene1242;Dbxref=Genbank:WP_011192783.1;Name=WP_011192783.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_011192783.1;transl_table=11 NC_009708.1 RefSeq gene 1427760 1430918 . - . ID=gene1243;Name=YPSIP31758_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07445;old_locus_tag=YpsIP31758_1214 NC_009708.1 Protein Homology CDS 1427760 1430918 . - 0 ID=cds1197;Parent=gene1243;Dbxref=Genbank:WP_011192782.1;Name=WP_011192782.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_011192782.1;transl_table=11 NC_009708.1 RefSeq gene 1430918 1432252 . - . ID=gene1244;Name=YPSIP31758_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07450;old_locus_tag=YpsIP31758_1215 NC_009708.1 Protein Homology CDS 1430918 1432252 . - 0 ID=cds1198;Parent=gene1244;Dbxref=Genbank:WP_012104821.1;Name=WP_012104821.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_012104821.1;transl_table=11 NC_009708.1 RefSeq gene 1432668 1433753 . - . ID=gene1245;Name=YPSIP31758_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07455;old_locus_tag=YpsIP31758_1216 NC_009708.1 Protein Homology CDS 1432668 1433753 . - 0 ID=cds1199;Parent=gene1245;Dbxref=Genbank:WP_011192780.1;Name=WP_011192780.1;gbkey=CDS;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=WP_011192780.1;transl_table=11 NC_009708.1 RefSeq gene 1434136 1435641 . - . ID=gene1246;Name=YPSIP31758_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07460;old_locus_tag=YpsIP31758_1217 NC_009708.1 Protein Homology CDS 1434136 1435641 . - 0 ID=cds1200;Parent=gene1246;Dbxref=Genbank:WP_012104822.1;Name=WP_012104822.1;gbkey=CDS;product=decarboxylase;protein_id=WP_012104822.1;transl_table=11 NC_009708.1 RefSeq gene 1435823 1437112 . + . ID=gene1247;Name=YPSIP31758_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07465;old_locus_tag=YpsIP31758_1218 NC_009708.1 Protein Homology CDS 1435823 1437112 . + 0 ID=cds1201;Parent=gene1247;Dbxref=Genbank:WP_012104823.1;Name=WP_012104823.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_012104823.1;transl_table=11 NC_009708.1 RefSeq gene 1437165 1438193 . + . ID=gene1248;Name=YPSIP31758_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07470;old_locus_tag=YpsIP31758_1219 NC_009708.1 Protein Homology CDS 1437165 1438193 . + 0 ID=cds1202;Parent=gene1248;Dbxref=Genbank:WP_002209788.1;Name=WP_002209788.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_002209788.1;transl_table=11 NC_009708.1 RefSeq gene 1438240 1439505 . + . ID=gene1249;Name=YPSIP31758_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07475;old_locus_tag=YpsIP31758_1220 NC_009708.1 Protein Homology CDS 1438240 1439505 . + 0 ID=cds1203;Parent=gene1249;Dbxref=Genbank:WP_012104825.1;Name=WP_012104825.1;gbkey=CDS;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_012104825.1;transl_table=11 NC_009708.1 RefSeq gene 1439588 1440415 . + . ID=gene1250;Name=YPSIP31758_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07480;old_locus_tag=YpsIP31758_1221 NC_009708.1 Protein Homology CDS 1439588 1440415 . + 0 ID=cds1204;Parent=gene1250;Dbxref=Genbank:WP_041175853.1;Name=WP_041175853.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_041175853.1;transl_table=11 NC_009708.1 RefSeq gene 1440686 1442038 . - . ID=gene1251;Name=YPSIP31758_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07485;old_locus_tag=YpsIP31758_1223 NC_009708.1 Protein Homology CDS 1440686 1442038 . - 0 ID=cds1205;Parent=gene1251;Dbxref=Genbank:WP_012104828.1;Name=WP_012104828.1;gbkey=CDS;product=chaperone;protein_id=WP_012104828.1;transl_table=11 NC_009708.1 RefSeq gene 1442180 1443655 . - . ID=gene1252;Name=YPSIP31758_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07490;old_locus_tag=YpsIP31758_1224 NC_009708.1 Protein Homology CDS 1442180 1443655 . - 0 ID=cds1206;Parent=gene1252;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11 NC_009708.1 RefSeq gene 1443707 1443895 . - . ID=gene1253;Name=YPSIP31758_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07495;old_locus_tag=YpsIP31758_1225 NC_009708.1 Protein Homology CDS 1443707 1443895 . - 0 ID=cds1207;Parent=gene1253;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11 NC_009708.1 RefSeq gene 1444084 1445643 . - . ID=gene1254;Name=YPSIP31758_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07500;old_locus_tag=YpsIP31758_1226 NC_009708.1 Protein Homology CDS 1444084 1445643 . - 0 ID=cds1208;Parent=gene1254;Dbxref=Genbank:WP_002209783.1;Name=WP_002209783.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NC_009708.1 RefSeq gene 1445654 1447717 . - . ID=gene1255;Name=YPSIP31758_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07505;old_locus_tag=YpsIP31758_1227 NC_009708.1 Protein Homology CDS 1445654 1447717 . - 0 ID=cds1209;Parent=gene1255;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11 NC_009708.1 RefSeq gene 1448001 1450232 . + . ID=gene1256;Name=YPSIP31758_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07510;old_locus_tag=YpsIP31758_1228 NC_009708.1 Protein Homology CDS 1448001 1450232 . + 0 ID=cds1210;Parent=gene1256;Dbxref=Genbank:WP_012104829.1;Name=WP_012104829.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_012104829.1;transl_table=11 NC_009708.1 RefSeq gene 1450292 1451944 . + . ID=gene1257;Name=YPSIP31758_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07515;old_locus_tag=YpsIP31758_1229 NC_009708.1 Protein Homology CDS 1450292 1451944 . + 0 ID=cds1211;Parent=gene1257;Dbxref=Genbank:WP_032465662.1;Name=WP_032465662.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_032465662.1;transl_table=11 NC_009708.1 RefSeq gene 1451972 1452784 . + . ID=gene1258;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07520;old_locus_tag=YpsIP31758_1230 NC_009708.1 Protein Homology CDS 1451972 1452784 . + 0 ID=cds1212;Parent=gene1258;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11 NC_009708.1 RefSeq gene 1453499 1454221 . + . ID=gene1259;Name=YPSIP31758_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07525 NC_009708.1 Protein Homology CDS 1453499 1454221 . + 0 ID=cds1213;Parent=gene1259;Dbxref=Genbank:WP_002214662.1;Name=WP_002214662.1;gbkey=CDS;product=N-methylation of lysine residues in flagellin;protein_id=WP_002214662.1;transl_table=11 NC_009708.1 RefSeq gene 1454315 1454860 . - . ID=gene1260;Name=YPSIP31758_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07530;old_locus_tag=YpsIP31758_1232 NC_009708.1 Protein Homology CDS 1454315 1454860 . - 0 ID=cds1214;Parent=gene1260;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NC_009708.1 RefSeq gene 1455089 1455727 . - . ID=gene1261;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07535;old_locus_tag=YpsIP31758_1233 NC_009708.1 Protein Homology CDS 1455089 1455727 . - 0 ID=cds1215;Parent=gene1261;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NC_009708.1 RefSeq gene 1455842 1456885 . - . ID=gene1262;Name=YPSIP31758_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07540;old_locus_tag=YpsIP31758_1234 NC_009708.1 Protein Homology CDS 1455842 1456885 . - 0 ID=cds1216;Parent=gene1262;Dbxref=Genbank:WP_012104831.1;Name=WP_012104831.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_012104831.1;transl_table=11 NC_009708.1 RefSeq gene 1457320 1457946 . + . ID=gene1263;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07545;old_locus_tag=YpsIP31758_1235 NC_009708.1 Protein Homology CDS 1457320 1457946 . + 0 ID=cds1217;Parent=gene1263;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NC_009708.1 RefSeq gene 1458058 1459344 . + . ID=gene1264;Name=YPSIP31758_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07550;old_locus_tag=YpsIP31758_1236 NC_009708.1 Protein Homology CDS 1458058 1459344 . + 0 ID=cds1218;Parent=gene1264;Dbxref=Genbank:WP_011192769.1;Name=WP_011192769.1;gbkey=CDS;product=uracil transporter;protein_id=WP_011192769.1;transl_table=11 NC_009708.1 RefSeq gene 1459603 1460310 . + . ID=gene1265;Name=YPSIP31758_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07555;old_locus_tag=YpsIP31758_1237 NC_009708.1 Protein Homology CDS 1459603 1460310 . + 0 ID=cds1219;Parent=gene1265;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NC_009708.1 RefSeq gene 1460523 1460879 . - . ID=gene1266;Name=YPSIP31758_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07560;old_locus_tag=YpsIP31758_1238 NC_009708.1 Protein Homology CDS 1460523 1460879 . - 0 ID=cds1220;Parent=gene1266;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11 NC_009708.1 RefSeq gene 1460986 1462470 . - . ID=gene1267;Name=YPSIP31758_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07565;old_locus_tag=YpsIP31758_1239 NC_009708.1 Protein Homology CDS 1460986 1462470 . - 0 ID=cds1221;Parent=gene1267;Dbxref=Genbank:WP_012104832.1;Name=WP_012104832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104832.1;transl_table=11 NC_009708.1 RefSeq gene 1462801 1463865 . + . ID=gene1268;Name=YPSIP31758_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07570;old_locus_tag=YpsIP31758_1240 NC_009708.1 Protein Homology CDS 1462801 1463865 . + 0 ID=cds1222;Parent=gene1268;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11 NC_009708.1 RefSeq gene 1463955 1464128 . - . ID=gene1269;Name=YPSIP31758_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07575;old_locus_tag=YpsIP31758_1241 NC_009708.1 Protein Homology CDS 1463955 1464128 . - 0 ID=cds1223;Parent=gene1269;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11 NC_009708.1 RefSeq gene 1464466 1465166 . + . ID=gene1270;Name=YPSIP31758_RS07580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS07580;pseudo=true NC_009708.1 Protein Homology CDS 1464466 1465166 . + 0 ID=cds1224;Parent=gene1270;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 1465170 1465589 . + . ID=gene1271;Name=YPSIP31758_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07585 NC_009708.1 Protein Homology CDS 1465170 1465589 . + 0 ID=cds1225;Parent=gene1271;Dbxref=Genbank:WP_025384480.1;Name=WP_025384480.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025384480.1;transl_table=11 NC_009708.1 RefSeq gene 1465833 1466303 . - . ID=gene1272;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07590;old_locus_tag=YpsIP31758_1245 NC_009708.1 Protein Homology CDS 1465833 1466303 . - 0 ID=cds1226;Parent=gene1272;Dbxref=Genbank:WP_002224836.1;Name=WP_002224836.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_002224836.1;transl_table=11 NC_009708.1 RefSeq gene 1466306 1466875 . - . ID=gene1273;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07595;old_locus_tag=YpsIP31758_1246 NC_009708.1 Protein Homology CDS 1466306 1466875 . - 0 ID=cds1227;Parent=gene1273;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11 NC_009708.1 RefSeq gene 1467040 1467921 . + . ID=gene1274;Name=YPSIP31758_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07600;old_locus_tag=YpsIP31758_1247 NC_009708.1 Protein Homology CDS 1467040 1467921 . + 0 ID=cds1228;Parent=gene1274;Dbxref=Genbank:WP_002227834.1;Name=WP_002227834.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NC_009708.1 RefSeq gene 1467939 1468997 . + . ID=gene1275;Name=YPSIP31758_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07605;old_locus_tag=YpsIP31758_1248 NC_009708.1 Protein Homology CDS 1467939 1468997 . + 0 ID=cds1229;Parent=gene1275;Dbxref=Genbank:WP_011192764.1;Name=WP_011192764.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_011192764.1;transl_table=11 NC_009708.1 RefSeq gene 1469068 1469781 . + . ID=gene1276;Name=YPSIP31758_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07610;old_locus_tag=YpsIP31758_1249 NC_009708.1 Protein Homology CDS 1469068 1469781 . + 0 ID=cds1230;Parent=gene1276;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NC_009708.1 RefSeq gene 1470001 1470870 . + . ID=gene1277;Name=YPSIP31758_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07615;old_locus_tag=YpsIP31758_1250 NC_009708.1 Protein Homology CDS 1470001 1470870 . + 0 ID=cds1231;Parent=gene1277;Dbxref=Genbank:WP_012104834.1;Name=WP_012104834.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104834.1;transl_table=11 NC_009708.1 RefSeq gene 1470964 1471416 . + . ID=gene1278;Name=YPSIP31758_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07620;old_locus_tag=YpsIP31758_1251 NC_009708.1 Protein Homology CDS 1470964 1471416 . + 0 ID=cds1232;Parent=gene1278;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11 NC_009708.1 RefSeq gene 1471418 1473469 . + . ID=gene1279;Name=YPSIP31758_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07625;old_locus_tag=YpsIP31758_1252 NC_009708.1 Protein Homology CDS 1471418 1473469 . + 0 ID=cds1233;Parent=gene1279;Dbxref=Genbank:WP_012104835.1;Name=WP_012104835.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=methionine tRNA cytidine acetyltransferase;protein_id=WP_012104835.1;transl_table=11 NC_009708.1 RefSeq gene 1473723 1473917 . - . ID=gene1280;Name=YPSIP31758_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07630;old_locus_tag=YpsIP31758_1253 NC_009708.1 Protein Homology CDS 1473723 1473917 . - 0 ID=cds1234;Parent=gene1280;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11 NC_009708.1 RefSeq gene 1473985 1474662 . - . ID=gene1281;Name=YPSIP31758_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07635;old_locus_tag=YpsIP31758_1254 NC_009708.1 Protein Homology CDS 1473985 1474662 . - 0 ID=cds1235;Parent=gene1281;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11 NC_009708.1 RefSeq gene 1474659 1475786 . - . ID=gene1282;Name=YPSIP31758_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07640;old_locus_tag=YpsIP31758_1255 NC_009708.1 Protein Homology CDS 1474659 1475786 . - 0 ID=cds1236;Parent=gene1282;Dbxref=Genbank:WP_012104836.1;Name=WP_012104836.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_012104836.1;transl_table=11 NC_009708.1 RefSeq gene 1475788 1476186 . - . ID=gene1283;Name=YPSIP31758_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07645;old_locus_tag=YpsIP31758_1256 NC_009708.1 Protein Homology CDS 1475788 1476186 . - 0 ID=cds1237;Parent=gene1283;Dbxref=Genbank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;product=reductase;protein_id=WP_002208548.1;transl_table=11 NC_009708.1 RefSeq gene 1476346 1476819 . - . ID=gene1284;Name=YPSIP31758_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07650;old_locus_tag=YpsIP31758_1257 NC_009708.1 Protein Homology CDS 1476346 1476819 . - 0 ID=cds1238;Parent=gene1284;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11 NC_009708.1 RefSeq gene 1477130 1478218 . + . ID=gene1285;Name=YPSIP31758_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07655;old_locus_tag=YpsIP31758_1258 NC_009708.1 Protein Homology CDS 1477130 1478218 . + 0 ID=cds1239;Parent=gene1285;Dbxref=Genbank:WP_011192761.1;Name=WP_011192761.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_011192761.1;transl_table=11 NC_009708.1 RefSeq gene 1478313 1480082 . + . ID=gene1286;Name=YPSIP31758_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07660;old_locus_tag=YpsIP31758_1259 NC_009708.1 Protein Homology CDS 1478313 1480082 . + 0 ID=cds1240;Parent=gene1286;Dbxref=Genbank:WP_002231049.1;Name=WP_002231049.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002231049.1;transl_table=11 NC_009708.1 RefSeq gene 1480075 1481145 . + . ID=gene1287;Name=YPSIP31758_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07665;old_locus_tag=YpsIP31758_1260 NC_009708.1 Protein Homology CDS 1480075 1481145 . + 0 ID=cds1241;Parent=gene1287;Dbxref=Genbank:WP_002208544.1;Name=WP_002208544.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208544.1;transl_table=11 NC_009708.1 RefSeq gene 1481626 1483296 . + . ID=gene1288;Name=YPSIP31758_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07670;old_locus_tag=YpsIP31758_1263 NC_009708.1 Protein Homology CDS 1481626 1483296 . + 0 ID=cds1242;Parent=gene1288;Dbxref=Genbank:WP_002378486.1;Name=WP_002378486.1;gbkey=CDS;product=sulfatase;protein_id=WP_002378486.1;transl_table=11 NC_009708.1 RefSeq gene 1483354 1484529 . + . ID=gene1289;Name=YPSIP31758_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07675;old_locus_tag=YpsIP31758_1264 NC_009708.1 Protein Homology CDS 1483354 1484529 . + 0 ID=cds1243;Parent=gene1289;Dbxref=Genbank:WP_002208542.1;Name=WP_002208542.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002208542.1;transl_table=11 NC_009708.1 RefSeq gene 1485276 1485824 . - . ID=gene1290;Name=YPSIP31758_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07680;old_locus_tag=YpsIP31758_1266 NC_009708.1 Protein Homology CDS 1485276 1485824 . - 0 ID=cds1244;Parent=gene1290;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11 NC_009708.1 RefSeq gene 1486113 1486697 . - . ID=gene1291;Name=YPSIP31758_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07685;old_locus_tag=YpsIP31758_1267 NC_009708.1 Protein Homology CDS 1486113 1486697 . - 0 ID=cds1245;Parent=gene1291;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NC_009708.1 RefSeq gene 1486928 1490059 . - . ID=gene1292;Name=YPSIP31758_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07690;old_locus_tag=YpsIP31758_1268 NC_009708.1 Protein Homology CDS 1486928 1490059 . - 0 ID=cds1246;Parent=gene1292;Dbxref=Genbank:WP_011192758.1;Name=WP_011192758.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_011192758.1;transl_table=11 NC_009708.1 RefSeq gene 1490474 1490752 . + . ID=gene1293;Name=YPSIP31758_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07695;old_locus_tag=YpsIP31758_1269 NC_009708.1 Protein Homology CDS 1490474 1490752 . + 0 ID=cds1247;Parent=gene1293;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11 NC_009708.1 RefSeq gene 1490765 1491394 . - . ID=gene1294;Name=YPSIP31758_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07700;old_locus_tag=YpsIP31758_1270 NC_009708.1 Protein Homology CDS 1490765 1491394 . - 0 ID=cds1248;Parent=gene1294;Dbxref=Genbank:WP_012104839.1;Name=WP_012104839.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104839.1;transl_table=11 NC_009708.1 RefSeq gene 1492233 1492736 . + . ID=gene1295;Name=YPSIP31758_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07705;old_locus_tag=YpsIP31758_1271 NC_009708.1 Protein Homology CDS 1492233 1492736 . + 0 ID=cds1249;Parent=gene1295;Dbxref=Genbank:WP_002231048.1;Name=WP_002231048.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002231048.1;transl_table=11 NC_009708.1 RefSeq gene 1492726 1492992 . + . ID=gene1296;Name=YPSIP31758_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07710;old_locus_tag=YpsIP31758_1272 NC_009708.1 Protein Homology CDS 1492726 1492992 . + 0 ID=cds1250;Parent=gene1296;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11 NC_009708.1 RefSeq gene 1492989 1495481 . + . ID=gene1297;Name=YPSIP31758_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07715;old_locus_tag=YpsIP31758_1273 NC_009708.1 Protein Homology CDS 1492989 1495481 . + 0 ID=cds1251;Parent=gene1297;Dbxref=Genbank:WP_011171900.1;Name=WP_011171900.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_011171900.1;transl_table=11 NC_009708.1 RefSeq gene 1495564 1496031 . + . ID=gene1298;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07720;old_locus_tag=YpsIP31758_1274 NC_009708.1 Protein Homology CDS 1495564 1496031 . + 0 ID=cds1252;Parent=gene1298;Dbxref=Genbank:WP_002208532.1;Name=WP_002208532.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_002208532.1;transl_table=11 NC_009708.1 RefSeq gene 1496059 1496658 . + . ID=gene1299;Name=YPSIP31758_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07725;old_locus_tag=YpsIP31758_1275 NC_009708.1 Protein Homology CDS 1496059 1496658 . + 0 ID=cds1253;Parent=gene1299;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11 NC_009708.1 RefSeq gene 1496843 1497439 . + . ID=gene1300;Name=YPSIP31758_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07730;old_locus_tag=YpsIP31758_1276 NC_009708.1 Protein Homology CDS 1496843 1497439 . + 0 ID=cds1254;Parent=gene1300;Dbxref=Genbank:WP_002208529.1;Name=WP_002208529.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1497474 1497583 . + . ID=id145;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 1497614 1497723 . + . ID=id146;gbkey=repeat_region NC_009708.1 RefSeq gene 1497898 1500177 . + . ID=gene1301;Name=YPSIP31758_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07735;old_locus_tag=YpsIP31758_1277 NC_009708.1 Protein Homology CDS 1497898 1500177 . + 0 ID=cds1255;Parent=gene1301;Dbxref=Genbank:WP_011192757.1;Name=WP_011192757.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=malic enzyme;protein_id=WP_011192757.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1500186 1500358 . + . ID=id147;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 1500366 1500578 . + . ID=id148;gbkey=repeat_region NC_009708.1 RefSeq gene 1500599 1501057 . - . ID=gene1302;Name=YPSIP31758_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07740;old_locus_tag=YpsIP31758_1279 NC_009708.1 Protein Homology CDS 1500599 1501057 . - 0 ID=cds1256;Parent=gene1302;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11 NC_009708.1 RefSeq gene 1501057 1501986 . - . ID=gene1303;Name=YPSIP31758_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07745;old_locus_tag=YpsIP31758_1280 NC_009708.1 Protein Homology CDS 1501057 1501986 . - 0 ID=cds1257;Parent=gene1303;Dbxref=Genbank:WP_012104841.1;Name=WP_012104841.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_012104841.1;transl_table=11 NC_009708.1 RefSeq gene 1502268 1502693 . + . ID=gene1304;Name=YPSIP31758_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07750;old_locus_tag=YpsIP31758_1281 NC_009708.1 Protein Homology CDS 1502268 1502693 . + 0 ID=cds1258;Parent=gene1304;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1502510 1502982 . + . ID=id149;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 1503379 1503528 . + . ID=id150;gbkey=repeat_region NC_009708.1 RefSeq gene 1503396 1503581 . - . ID=gene1305;Name=YPSIP31758_RS22560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22560;partial=true;pseudo=true;start_range=.,1503396 NC_009708.1 Protein Homology CDS 1503396 1503581 . - 0 ID=cds1259;Parent=gene1305;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1503396;transl_table=11 NC_009708.1 RefSeq gene 1503672 1504334 . + . ID=gene1306;Name=YPSIP31758_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07760;old_locus_tag=YpsIP31758_1283 NC_009708.1 Protein Homology CDS 1503672 1504334 . + 0 ID=cds1260;Parent=gene1306;Dbxref=Genbank:WP_032466931.1;Name=WP_032466931.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466931.1;transl_table=11 NC_009708.1 RefSeq gene 1504331 1505038 . + . ID=gene1307;Name=YPSIP31758_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07765;old_locus_tag=YpsIP31758_1284 NC_009708.1 Protein Homology CDS 1504331 1505038 . + 0 ID=cds1261;Parent=gene1307;Dbxref=Genbank:WP_012104842.1;Name=WP_012104842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104842.1;transl_table=11 NC_009708.1 RefSeq gene 1505041 1505766 . + . ID=gene1308;Name=YPSIP31758_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07770;old_locus_tag=YpsIP31758_1285 NC_009708.1 Protein Homology CDS 1505041 1505766 . + 0 ID=cds1262;Parent=gene1308;Dbxref=Genbank:WP_011192754.1;Name=WP_011192754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192754.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1505910 1506269 . + . ID=id151;gbkey=repeat_region NC_009708.1 RefSeq gene 1505911 1506093 . + . ID=gene1309;Name=YPSIP31758_RS07775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS07775;old_locus_tag=YpsIP31758_1286;partial=true;pseudo=true;start_range=.,1505911 NC_009708.1 Protein Homology CDS 1505911 1506093 . + 0 ID=cds1263;Parent=gene1309;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=acetyltransferase;pseudo=true;start_range=.,1505911;transl_table=11 NC_009708.1 RefSeq gene 1506274 1506458 . - . ID=gene1310;Name=YPSIP31758_RS07780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS07780;pseudo=true NC_009708.1 Protein Homology CDS 1506274 1506458 . - 0 ID=cds1264;Parent=gene1310;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 1506305 1506423 . + . ID=id152;gbkey=repeat_region NC_009708.1 RefSeq gene 1506564 1506980 . + . ID=gene1311;Name=YPSIP31758_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07785;old_locus_tag=YpsIP31758_1287 NC_009708.1 Protein Homology CDS 1506564 1506980 . + 0 ID=cds1265;Parent=gene1311;Dbxref=Genbank:WP_011192753.1;Name=WP_011192753.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192753.1;transl_table=11 NC_009708.1 RefSeq gene 1507072 1509351 . - . ID=gene1312;Name=YPSIP31758_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07790;old_locus_tag=YpsIP31758_1288 NC_009708.1 Protein Homology CDS 1507072 1509351 . - 0 ID=cds1266;Parent=gene1312;Dbxref=Genbank:WP_012104844.1;Name=WP_012104844.1;gbkey=CDS;product=autotransporter;protein_id=WP_012104844.1;transl_table=11 NC_009708.1 RefSeq gene 1509856 1510269 . - . ID=gene1313;Name=YPSIP31758_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07795;old_locus_tag=YpsIP31758_1289 NC_009708.1 Protein Homology CDS 1509856 1510269 . - 0 ID=cds1267;Parent=gene1313;Dbxref=Genbank:WP_012104845.1;Name=WP_012104845.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104845.1;transl_table=11 NC_009708.1 RefSeq gene 1510632 1511243 . + . ID=gene1314;Name=YPSIP31758_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07800;old_locus_tag=YpsIP31758_1290 NC_009708.1 Protein Homology CDS 1510632 1511243 . + 0 ID=cds1268;Parent=gene1314;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11 NC_009708.1 RefSeq gene 1511421 1512320 . + . ID=gene1315;Name=YPSIP31758_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07805;old_locus_tag=YpsIP31758_1292 NC_009708.1 Protein Homology CDS 1511421 1512320 . + 0 ID=cds1269;Parent=gene1315;Dbxref=Genbank:WP_012104846.1;Name=WP_012104846.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_012104846.1;transl_table=11 NC_009708.1 RefSeq gene 1512418 1513311 . - . ID=gene1316;Name=YPSIP31758_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07810;old_locus_tag=YpsIP31758_1293 NC_009708.1 Protein Homology CDS 1512418 1513311 . - 0 ID=cds1270;Parent=gene1316;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11 NC_009708.1 RefSeq gene 1513374 1513997 . - . ID=gene1317;Name=YPSIP31758_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07815;old_locus_tag=YpsIP31758_1294 NC_009708.1 Protein Homology CDS 1513374 1513997 . - 0 ID=cds1271;Parent=gene1317;Dbxref=Genbank:WP_038825373.1;Name=WP_038825373.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_038825373.1;transl_table=11 NC_009708.1 RefSeq gene 1514579 1515451 . + . ID=gene1318;Name=YPSIP31758_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07820;old_locus_tag=YpsIP31758_1295 NC_009708.1 Protein Homology CDS 1514579 1515451 . + 0 ID=cds1272;Parent=gene1318;Dbxref=Genbank:WP_002208516.1;Name=WP_002208516.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208516.1;transl_table=11 NC_009708.1 RefSeq gene 1515533 1516003 . + . ID=gene1319;Name=YPSIP31758_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07825;old_locus_tag=YpsIP31758_1296 NC_009708.1 Protein Homology CDS 1515533 1516003 . + 0 ID=cds1273;Parent=gene1319;Dbxref=Genbank:WP_011192748.1;Name=WP_011192748.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_011192748.1;transl_table=11 NC_009708.1 RefSeq gene 1516043 1516195 . + . ID=gene1320;Name=YPSIP31758_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07830 NC_009708.1 Protein Homology CDS 1516043 1516195 . + 0 ID=cds1274;Parent=gene1320;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11 NC_009708.1 RefSeq gene 1516192 1517070 . + . ID=gene1321;Name=YPSIP31758_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07835;old_locus_tag=YpsIP31758_1297 NC_009708.1 Protein Homology CDS 1516192 1517070 . + 0 ID=cds1275;Parent=gene1321;Dbxref=Genbank:WP_011192747.1;Name=WP_011192747.1;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_011192747.1;transl_table=11 NC_009708.1 RefSeq gene 1517681 1519213 . + . ID=gene1322;Name=YPSIP31758_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07840;old_locus_tag=YpsIP31758_1298 NC_009708.1 Protein Homology CDS 1517681 1519213 . + 0 ID=cds1276;Parent=gene1322;Dbxref=Genbank:WP_002231046.1;Name=WP_002231046.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002231046.1;transl_table=11 NC_009708.1 RefSeq gene 1519546 1520583 . + . ID=gene1323;Name=YPSIP31758_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07845;old_locus_tag=YpsIP31758_1299 NC_009708.1 Protein Homology CDS 1519546 1520583 . + 0 ID=cds1277;Parent=gene1323;Dbxref=Genbank:WP_012104848.1;Name=WP_012104848.1;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=WP_012104848.1;transl_table=11 NC_009708.1 RefSeq gene 1520583 1521416 . + . ID=gene1324;Name=YPSIP31758_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07850;old_locus_tag=YpsIP31758_1300 NC_009708.1 Protein Homology CDS 1520583 1521416 . + 0 ID=cds1278;Parent=gene1324;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11 NC_009708.1 RefSeq gene 1521416 1522291 . + . ID=gene1325;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07855;old_locus_tag=YpsIP31758_1301 NC_009708.1 Protein Homology CDS 1521416 1522291 . + 0 ID=cds1279;Parent=gene1325;Dbxref=Genbank:WP_002208510.1;Name=WP_002208510.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_002208510.1;transl_table=11 NC_009708.1 RefSeq gene 1522281 1523372 . + . ID=gene1326;Name=YPSIP31758_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07860;old_locus_tag=YpsIP31758_1302 NC_009708.1 Protein Homology CDS 1522281 1523372 . + 0 ID=cds1280;Parent=gene1326;Dbxref=Genbank:WP_011192745.1;Name=WP_011192745.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_011192745.1;transl_table=11 NC_009708.1 RefSeq gene 1523543 1524421 . + . ID=gene1327;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07865;old_locus_tag=YpsIP31758_1303 NC_009708.1 Protein Homology CDS 1523543 1524421 . + 0 ID=cds1281;Parent=gene1327;Dbxref=Genbank:WP_002208508.1;Name=WP_002208508.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=WP_002208508.1;transl_table=11 NC_009708.1 RefSeq gene 1524614 1525321 . - . ID=gene1328;Name=YPSIP31758_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07870;old_locus_tag=YpsIP31758_1304 NC_009708.1 Protein Homology CDS 1524614 1525321 . - 0 ID=cds1282;Parent=gene1328;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11 NC_009708.1 RefSeq gene 1525318 1526862 . - . ID=gene1329;Name=YPSIP31758_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07875;old_locus_tag=YpsIP31758_1305 NC_009708.1 Protein Homology CDS 1525318 1526862 . - 0 ID=cds1283;Parent=gene1329;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1526918 1527086 . + . ID=id153;gbkey=repeat_region NC_009708.1 RefSeq gene 1527095 1528513 . - . ID=gene1330;Name=YPSIP31758_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07880;old_locus_tag=YpsIP31758_1306 NC_009708.1 Protein Homology CDS 1527095 1528513 . - 0 ID=cds1284;Parent=gene1330;Dbxref=Genbank:WP_011192743.1;Name=WP_011192743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192743.1;transl_table=11 NC_009708.1 RefSeq gene 1529214 1530395 . + . ID=gene1331;Name=YPSIP31758_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07885;old_locus_tag=YpsIP31758_1307 NC_009708.1 Protein Homology CDS 1529214 1530395 . + 0 ID=cds1285;Parent=gene1331;Dbxref=Genbank:WP_012104850.1;Name=WP_012104850.1;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_012104850.1;transl_table=11 NC_009708.1 RefSeq gene 1530429 1531649 . + . ID=gene1332;Name=YPSIP31758_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07890;old_locus_tag=YpsIP31758_1308 NC_009708.1 Protein Homology CDS 1530429 1531649 . + 0 ID=cds1286;Parent=gene1332;Dbxref=Genbank:WP_011192741.1;Name=WP_011192741.1;gbkey=CDS;product=peptidase M24;protein_id=WP_011192741.1;transl_table=11 NC_009708.1 RefSeq gene 1531792 1531989 . + . ID=gene1333;Name=YPSIP31758_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07895 NC_009708.1 Protein Homology CDS 1531792 1531989 . + 0 ID=cds1287;Parent=gene1333;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11 NC_009708.1 RefSeq gene 1531986 1533446 . + . ID=gene1334;Name=YPSIP31758_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07900;old_locus_tag=YpsIP31758_1309 NC_009708.1 Protein Homology CDS 1531986 1533446 . + 0 ID=cds1288;Parent=gene1334;Dbxref=Genbank:WP_011192740.1;Name=WP_011192740.1;gbkey=CDS;product=sodium:solute symporter;protein_id=WP_011192740.1;transl_table=11 NC_009708.1 RefSeq gene 1533506 1535152 . + . ID=gene1335;Name=YPSIP31758_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07905;old_locus_tag=YpsIP31758_1310 NC_009708.1 Protein Homology CDS 1533506 1535152 . + 0 ID=cds1289;Parent=gene1335;Dbxref=Genbank:WP_012104851.1;Name=WP_012104851.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_012104851.1;transl_table=11 NC_009708.1 RefSeq gene 1535407 1537443 . - . ID=gene1336;Name=YPSIP31758_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07910;old_locus_tag=YpsIP31758_1311 NC_009708.1 Protein Homology CDS 1535407 1537443 . - 0 ID=cds1290;Parent=gene1336;Dbxref=Genbank:WP_011192738.1;Name=WP_011192738.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=Macrolide export ATP-binding/permease MacB 2;protein_id=WP_011192738.1;transl_table=11 NC_009708.1 RefSeq gene 1537447 1538652 . - . ID=gene1337;Name=YPSIP31758_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07915;old_locus_tag=YpsIP31758_1312 NC_009708.1 Protein Homology CDS 1537447 1538652 . - 0 ID=cds1291;Parent=gene1337;Dbxref=Genbank:WP_012104852.1;Name=WP_012104852.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_012104852.1;transl_table=11 NC_009708.1 RefSeq gene 1538840 1539523 . + . ID=gene1338;Name=YPSIP31758_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07920;old_locus_tag=YpsIP31758_1313 NC_009708.1 Protein Homology CDS 1538840 1539523 . + 0 ID=cds1292;Parent=gene1338;Dbxref=Genbank:WP_012104853.1;Name=WP_012104853.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_012104853.1;transl_table=11 NC_009708.1 RefSeq gene 1539549 1540898 . + . ID=gene1339;Name=YPSIP31758_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07925;old_locus_tag=YpsIP31758_1314 NC_009708.1 Protein Homology CDS 1539549 1540898 . + 0 ID=cds1293;Parent=gene1339;Dbxref=Genbank:WP_011192737.1;Name=WP_011192737.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_011192737.1;transl_table=11 NC_009708.1 RefSeq gene 1541081 1541590 . - . ID=gene1340;Name=YPSIP31758_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07930;old_locus_tag=YpsIP31758_1315 NC_009708.1 Protein Homology CDS 1541081 1541590 . - 0 ID=cds1294;Parent=gene1340;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NC_009708.1 RefSeq gene 1541639 1543366 . - . ID=gene1341;Name=YPSIP31758_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07935;old_locus_tag=YpsIP31758_1316 NC_009708.1 Protein Homology CDS 1541639 1543366 . - 0 ID=cds1295;Parent=gene1341;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11 NC_009708.1 RefSeq gene 1543415 1543672 . - . ID=gene1342;Name=YPSIP31758_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07940;old_locus_tag=YpsIP31758_1317 NC_009708.1 Protein Homology CDS 1543415 1543672 . - 0 ID=cds1296;Parent=gene1342;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11 NC_009708.1 RefSeq gene 1544171 1545139 . - . ID=gene1343;Name=YPSIP31758_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07945;old_locus_tag=YpsIP31758_1318 NC_009708.1 Protein Homology CDS 1544171 1545139 . - 0 ID=cds1297;Parent=gene1343;Dbxref=Genbank:WP_002222180.1;Name=WP_002222180.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11 NC_009708.1 RefSeq gene 1545296 1546030 . - . ID=gene1344;Name=YPSIP31758_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07950;old_locus_tag=YpsIP31758_1319 NC_009708.1 Protein Homology CDS 1545296 1546030 . - 0 ID=cds1298;Parent=gene1344;Dbxref=Genbank:WP_002231042.1;Name=WP_002231042.1;gbkey=CDS;product=cysteine biosynthesis protein CysZ;protein_id=WP_002231042.1;transl_table=11 NC_009708.1 RefSeq gene 1546279 1547265 . + . ID=gene1345;Name=YPSIP31758_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07955;old_locus_tag=YpsIP31758_1320 NC_009708.1 Protein Homology CDS 1546279 1547265 . + 0 ID=cds1299;Parent=gene1345;Dbxref=Genbank:WP_002227089.1;Name=WP_002227089.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_002227089.1;transl_table=11 NC_009708.1 RefSeq gene 1547356 1549368 . + . ID=gene1346;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07960;old_locus_tag=YpsIP31758_1321 NC_009708.1 Protein Homology CDS 1547356 1549368 . + 0 ID=cds1300;Parent=gene1346;Dbxref=Genbank:WP_012104854.1;Name=WP_012104854.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=WP_012104854.1;transl_table=11 NC_009708.1 RefSeq gene 1549388 1549603 . + . ID=gene1347;Name=YPSIP31758_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07965;old_locus_tag=YpsIP31758_1322 NC_009708.1 Protein Homology CDS 1549388 1549603 . + 0 ID=cds1301;Parent=gene1347;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11 NC_009708.1 RefSeq gene 1549704 1550051 . - . ID=gene1348;Name=YPSIP31758_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07970;old_locus_tag=YpsIP31758_1323 NC_009708.1 Protein Homology CDS 1549704 1550051 . - 0 ID=cds1302;Parent=gene1348;Dbxref=Genbank:WP_011192734.1;Name=WP_011192734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192734.1;transl_table=11 NC_009708.1 RefSeq gene 1550200 1550805 . - . ID=gene1349;Name=YPSIP31758_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07975;old_locus_tag=YpsIP31758_1324 NC_009708.1 Protein Homology CDS 1550200 1550805 . - 0 ID=cds1303;Parent=gene1349;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11 NC_009708.1 RefSeq gene 1550998 1551073 . - . ID=gene1350;Name=YPSIP31758_RS07980;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS07980;old_locus_tag=YpsIP31758_4221 NC_009708.1 tRNAscan-SE tRNA 1550998 1551073 . - . ID=rna45;Parent=gene1350;anticodon=(pos:complement(1551038..1551040));gbkey=tRNA;product=tRNA-Ala NC_009708.1 tRNAscan-SE exon 1550998 1551073 . - . ID=id154;Parent=rna45;anticodon=(pos:complement(1551038..1551040));gbkey=tRNA;product=tRNA-Ala NC_009708.1 RefSeq gene 1551151 1551226 . - . ID=gene1351;Name=YPSIP31758_RS07985;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS07985;old_locus_tag=YpsIP31758_4222 NC_009708.1 tRNAscan-SE tRNA 1551151 1551226 . - . ID=rna46;Parent=gene1351;anticodon=(pos:complement(1551191..1551193));gbkey=tRNA;product=tRNA-Ala NC_009708.1 tRNAscan-SE exon 1551151 1551226 . - . ID=id155;Parent=rna46;anticodon=(pos:complement(1551191..1551193));gbkey=tRNA;product=tRNA-Ala NC_009708.1 RefSeq gene 1551458 1552873 . - . ID=gene1352;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS07990;old_locus_tag=YpsIP31758_1325 NC_009708.1 Protein Homology CDS 1551458 1552873 . - 0 ID=cds1304;Parent=gene1352;Dbxref=Genbank:WP_012104855.1;Name=WP_012104855.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_012104855.1;transl_table=11 NC_009708.1 RefSeq gene 1553148 1553223 . + . ID=gene1353;Name=YPSIP31758_RS07995;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS07995;old_locus_tag=YpsIP31758_4223 NC_009708.1 tRNAscan-SE tRNA 1553148 1553223 . + . ID=rna47;Parent=gene1353;anticodon=(pos:1553181..1553183);gbkey=tRNA;product=tRNA-Val NC_009708.1 tRNAscan-SE exon 1553148 1553223 . + . ID=id156;Parent=rna47;anticodon=(pos:1553181..1553183);gbkey=tRNA;product=tRNA-Val NC_009708.1 RefSeq gene 1553260 1553335 . + . ID=gene1354;Name=YPSIP31758_RS08000;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS08000;old_locus_tag=YpsIP31758_4224 NC_009708.1 tRNAscan-SE tRNA 1553260 1553335 . + . ID=rna48;Parent=gene1354;anticodon=(pos:1553293..1553295);gbkey=tRNA;product=tRNA-Val NC_009708.1 tRNAscan-SE exon 1553260 1553335 . + . ID=id157;Parent=rna48;anticodon=(pos:1553293..1553295);gbkey=tRNA;product=tRNA-Val NC_009708.1 RefSeq gene 1553380 1553455 . + . ID=gene1355;Name=YPSIP31758_RS08005;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS08005;old_locus_tag=YpsIP31758_4225 NC_009708.1 tRNAscan-SE tRNA 1553380 1553455 . + . ID=rna49;Parent=gene1355;anticodon=(pos:1553413..1553415);gbkey=tRNA;product=tRNA-Val NC_009708.1 tRNAscan-SE exon 1553380 1553455 . + . ID=id158;Parent=rna49;anticodon=(pos:1553413..1553415);gbkey=tRNA;product=tRNA-Val NC_009708.1 RefSeq gene 1553655 1553730 . + . ID=gene1356;Name=YPSIP31758_RS08010;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS08010;old_locus_tag=YpsIP31758_4226 NC_009708.1 tRNAscan-SE tRNA 1553655 1553730 . + . ID=rna50;Parent=gene1356;anticodon=(pos:1553688..1553690);gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 1553655 1553730 . + . ID=id159;Parent=rna50;anticodon=(pos:1553688..1553690);gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq repeat_region 1553803 1553904 . + . ID=id160;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 1554045 1554146 . + . ID=id161;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 1554318 1554506 . + . ID=id162;gbkey=repeat_region NC_009708.1 RefSeq gene 1554532 1555716 . - . ID=gene1357;Name=YPSIP31758_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08015;old_locus_tag=YpsIP31758_1326 NC_009708.1 Protein Homology CDS 1554532 1555716 . - 0 ID=cds1305;Parent=gene1357;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11 NC_009708.1 RefSeq gene 1556167 1557396 . + . ID=gene1358;Name=YPSIP31758_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08020;old_locus_tag=YpsIP31758_1327 NC_009708.1 Protein Homology CDS 1556167 1557396 . + 0 ID=cds1306;Parent=gene1358;Dbxref=Genbank:WP_002211621.1;Name=WP_002211621.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_002211621.1;transl_table=11 NC_009708.1 RefSeq gene 1557489 1557803 . - . ID=gene1359;Name=YPSIP31758_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08025 NC_009708.1 Protein Homology CDS 1557489 1557803 . - 0 ID=cds1307;Parent=gene1359;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11 NC_009708.1 RefSeq gene 1558073 1559062 . - . ID=gene1360;Name=YPSIP31758_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08030;old_locus_tag=YpsIP31758_1329 NC_009708.1 Protein Homology CDS 1558073 1559062 . - 0 ID=cds1308;Parent=gene1360;Dbxref=Genbank:WP_011192731.1;Name=WP_011192731.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_011192731.1;transl_table=11 NC_009708.1 RefSeq gene 1559217 1560095 . - . ID=gene1361;Name=YPSIP31758_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08035;old_locus_tag=YpsIP31758_1330 NC_009708.1 Protein Homology CDS 1559217 1560095 . - 0 ID=cds1309;Parent=gene1361;Dbxref=Genbank:WP_012104856.1;Name=WP_012104856.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104856.1;transl_table=11 NC_009708.1 RefSeq gene 1560197 1560673 . + . ID=gene1362;Name=YPSIP31758_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08040;old_locus_tag=YpsIP31758_1331 NC_009708.1 Protein Homology CDS 1560197 1560673 . + 0 ID=cds1310;Parent=gene1362;Dbxref=Genbank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002211616.1;transl_table=11 NC_009708.1 RefSeq gene 1560854 1561825 . + . ID=gene1363;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08045;old_locus_tag=YpsIP31758_1332 NC_009708.1 Protein Homology CDS 1560854 1561825 . + 0 ID=cds1311;Parent=gene1363;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NC_009708.1 RefSeq gene 1561903 1563150 . - . ID=gene1364;Name=YPSIP31758_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08050;old_locus_tag=YpsIP31758_1333 NC_009708.1 Protein Homology CDS 1561903 1563150 . - 0 ID=cds1312;Parent=gene1364;Dbxref=Genbank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211614.1;transl_table=11 NC_009708.1 RefSeq gene 1563416 1564651 . + . ID=gene1365;Name=YPSIP31758_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08055;old_locus_tag=YpsIP31758_1334 NC_009708.1 Protein Homology CDS 1563416 1564651 . + 0 ID=cds1313;Parent=gene1365;Dbxref=Genbank:WP_002231034.1;Name=WP_002231034.1;gbkey=CDS;product=aspartate aminotransferase;protein_id=WP_002231034.1;transl_table=11 NC_009708.1 RefSeq gene 1564877 1565401 . + . ID=gene1366;Name=YPSIP31758_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08060;old_locus_tag=YpsIP31758_1335 NC_009708.1 Protein Homology CDS 1564877 1565401 . + 0 ID=cds1314;Parent=gene1366;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11 NC_009708.1 RefSeq gene 1565496 1565927 . - . ID=gene1367;Name=YPSIP31758_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08065;old_locus_tag=YpsIP31758_1336 NC_009708.1 Protein Homology CDS 1565496 1565927 . - 0 ID=cds1315;Parent=gene1367;Dbxref=Genbank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_002211610.1;transl_table=11 NC_009708.1 RefSeq gene 1566517 1567188 . + . ID=gene1368;Name=YPSIP31758_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08070;old_locus_tag=YpsIP31758_1337 NC_009708.1 Protein Homology CDS 1566517 1567188 . + 0 ID=cds1316;Parent=gene1368;Dbxref=Genbank:WP_012104857.1;Name=WP_012104857.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104857.1;transl_table=11 NC_009708.1 RefSeq gene 1567215 1567571 . + . ID=gene1369;Name=YPSIP31758_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08075;old_locus_tag=YpsIP31758_1338 NC_009708.1 Protein Homology CDS 1567215 1567571 . + 0 ID=cds1317;Parent=gene1369;Dbxref=Genbank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215846.1;transl_table=11 NC_009708.1 RefSeq gene 1567568 1568224 . + . ID=gene1370;Name=YPSIP31758_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08080;old_locus_tag=YpsIP31758_1339 NC_009708.1 Protein Homology CDS 1567568 1568224 . + 0 ID=cds1318;Parent=gene1370;Dbxref=Genbank:WP_012104858.1;Name=WP_012104858.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104858.1;transl_table=11 NC_009708.1 RefSeq gene 1568469 1569038 . - . ID=gene1371;Name=YPSIP31758_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08085;old_locus_tag=YpsIP31758_1340 NC_009708.1 Protein Homology CDS 1568469 1569038 . - 0 ID=cds1319;Parent=gene1371;Dbxref=Genbank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_002211606.1;transl_table=11 NC_009708.1 RefSeq gene 1569035 1569631 . - . ID=gene1372;Name=YPSIP31758_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08090;old_locus_tag=YpsIP31758_1341 NC_009708.1 Protein Homology CDS 1569035 1569631 . - 0 ID=cds1320;Parent=gene1372;Dbxref=Genbank:WP_041175854.1;Name=WP_041175854.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_041175854.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1569657 1570131 . + . ID=id163;gbkey=repeat_region NC_009708.1 RefSeq gene 1570237 1571013 . - . ID=gene1373;Name=YPSIP31758_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08095;old_locus_tag=YpsIP31758_1342 NC_009708.1 Protein Homology CDS 1570237 1571013 . - 0 ID=cds1321;Parent=gene1373;Dbxref=Genbank:WP_002211604.1;Name=WP_002211604.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211604.1;transl_table=11 NC_009708.1 RefSeq gene 1571015 1571632 . - . ID=gene1374;Name=YPSIP31758_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08100;old_locus_tag=YpsIP31758_1343 NC_009708.1 Protein Homology CDS 1571015 1571632 . - 0 ID=cds1322;Parent=gene1374;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11 NC_009708.1 RefSeq gene 1571644 1574070 . - . ID=gene1375;Name=YPSIP31758_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08105;old_locus_tag=YpsIP31758_1344 NC_009708.1 Protein Homology CDS 1571644 1574070 . - 0 ID=cds1323;Parent=gene1375;Dbxref=Genbank:WP_011192724.1;Name=WP_011192724.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_011192724.1;transl_table=11 NC_009708.1 RefSeq gene 1574901 1575749 . + . ID=gene1376;Name=YPSIP31758_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08110;old_locus_tag=YpsIP31758_1345 NC_009708.1 Protein Homology CDS 1574901 1575749 . + 0 ID=cds1324;Parent=gene1376;Dbxref=Genbank:WP_012104860.1;Name=WP_012104860.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104860.1;transl_table=11 NC_009708.1 RefSeq gene 1575749 1576024 . + . ID=gene1377;Name=YPSIP31758_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08115 NC_009708.1 Protein Homology CDS 1575749 1576024 . + 0 ID=cds1325;Parent=gene1377;Dbxref=Genbank:WP_041175756.1;Name=WP_041175756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175756.1;transl_table=11 NC_009708.1 RefSeq gene 1576060 1576539 . - . ID=gene1378;Name=YPSIP31758_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08120;old_locus_tag=YpsIP31758_1346 NC_009708.1 Protein Homology CDS 1576060 1576539 . - 0 ID=cds1326;Parent=gene1378;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11 NC_009708.1 RefSeq gene 1577005 1577529 . + . ID=gene1379;Name=YPSIP31758_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08125;old_locus_tag=YpsIP31758_1347 NC_009708.1 Protein Homology CDS 1577005 1577529 . + 0 ID=cds1327;Parent=gene1379;Dbxref=Genbank:WP_012104861.1;Name=WP_012104861.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104861.1;transl_table=11 NC_009708.1 RefSeq gene 1577589 1578638 . - . ID=gene1380;Name=YPSIP31758_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08130;old_locus_tag=YpsIP31758_1348 NC_009708.1 Protein Homology CDS 1577589 1578638 . - 0 ID=cds1328;Parent=gene1380;Dbxref=Genbank:WP_011192722.1;Name=WP_011192722.1;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_011192722.1;transl_table=11 NC_009708.1 RefSeq gene 1578635 1580221 . - . ID=gene1381;Name=YPSIP31758_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08135;old_locus_tag=YpsIP31758_1349 NC_009708.1 Protein Homology CDS 1578635 1580221 . - 0 ID=cds1329;Parent=gene1381;Dbxref=Genbank:WP_011192721.1;Name=WP_011192721.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_011192721.1;transl_table=11 NC_009708.1 RefSeq gene 1580277 1581296 . - . ID=gene1382;Name=YPSIP31758_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08140;old_locus_tag=YpsIP31758_1350 NC_009708.1 Protein Homology CDS 1580277 1581296 . - 0 ID=cds1330;Parent=gene1382;Dbxref=Genbank:WP_011192720.1;Name=WP_011192720.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_011192720.1;transl_table=11 NC_009708.1 RefSeq gene 1581625 1582719 . + . ID=gene1383;Name=YPSIP31758_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08145;old_locus_tag=YpsIP31758_1351 NC_009708.1 Protein Homology CDS 1581625 1582719 . + 0 ID=cds1331;Parent=gene1383;Dbxref=Genbank:WP_011192719.1;Name=WP_011192719.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_011192719.1;transl_table=11 NC_009708.1 RefSeq gene 1583960 1584562 . + . ID=gene1384;Name=YPSIP31758_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08150;old_locus_tag=YpsIP31758_1353 NC_009708.1 Protein Homology CDS 1583960 1584562 . + 0 ID=cds1332;Parent=gene1384;Dbxref=Genbank:WP_011192718.1;Name=WP_011192718.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_011192718.1;transl_table=11 NC_009708.1 RefSeq gene 1584935 1585417 . - . ID=gene1385;Name=YPSIP31758_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08155;old_locus_tag=YpsIP31758_1354 NC_009708.1 Protein Homology CDS 1584935 1585417 . - 0 ID=cds1333;Parent=gene1385;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11 NC_009708.1 RefSeq gene 1585414 1587096 . - . ID=gene1386;Name=YPSIP31758_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08160;old_locus_tag=YpsIP31758_1355 NC_009708.1 Protein Homology CDS 1585414 1587096 . - 0 ID=cds1334;Parent=gene1386;Dbxref=Genbank:WP_012104863.1;Name=WP_012104863.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104863.1;transl_table=11 NC_009708.1 RefSeq gene 1587097 1587798 . - . ID=gene1387;Name=YPSIP31758_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08165;old_locus_tag=YpsIP31758_1356 NC_009708.1 Protein Homology CDS 1587097 1587798 . - 0 ID=cds1335;Parent=gene1387;Dbxref=Genbank:WP_012104864.1;Name=WP_012104864.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104864.1;transl_table=11 NC_009708.1 RefSeq gene 1587795 1589132 . - . ID=gene1388;Name=YPSIP31758_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08170;old_locus_tag=YpsIP31758_1357 NC_009708.1 Protein Homology CDS 1587795 1589132 . - 0 ID=cds1336;Parent=gene1388;Dbxref=Genbank:WP_012104865.1;Name=WP_012104865.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_012104865.1;transl_table=11 NC_009708.1 RefSeq gene 1589172 1590203 . - . ID=gene1389;Name=YPSIP31758_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08175;old_locus_tag=YpsIP31758_1358 NC_009708.1 Protein Homology CDS 1589172 1590203 . - 0 ID=cds1337;Parent=gene1389;Dbxref=Genbank:WP_011192714.1;Name=WP_011192714.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192714.1;transl_table=11 NC_009708.1 RefSeq gene 1590210 1591403 . - . ID=gene1390;Name=YPSIP31758_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08180;old_locus_tag=YpsIP31758_1359 NC_009708.1 Protein Homology CDS 1590210 1591403 . - 0 ID=cds1338;Parent=gene1390;Dbxref=Genbank:WP_011192713.1;Name=WP_011192713.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192713.1;transl_table=11 NC_009708.1 RefSeq gene 1591502 1592527 . - . ID=gene1391;Name=YPSIP31758_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08185;old_locus_tag=YpsIP31758_1360 NC_009708.1 Protein Homology CDS 1591502 1592527 . - 0 ID=cds1339;Parent=gene1391;Dbxref=Genbank:WP_011192712.1;Name=WP_011192712.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011192712.1;transl_table=11 NC_009708.1 RefSeq gene 1592527 1594407 . - . ID=gene1392;Name=YPSIP31758_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08190;old_locus_tag=YpsIP31758_1361 NC_009708.1 Protein Homology CDS 1592527 1594407 . - 0 ID=cds1340;Parent=gene1392;Dbxref=Genbank:WP_002211582.1;Name=WP_002211582.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211582.1;transl_table=11 NC_009708.1 RefSeq gene 1595191 1597848 . + . ID=gene1393;Name=YPSIP31758_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08195;old_locus_tag=YpsIP31758_1362 NC_009708.1 Protein Homology CDS 1595191 1597848 . + 0 ID=cds1341;Parent=gene1393;Dbxref=Genbank:WP_012104866.1;Name=WP_012104866.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_012104866.1;transl_table=11 NC_009708.1 RefSeq gene 1598059 1598604 . + . ID=gene1394;Name=YPSIP31758_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08200;old_locus_tag=YpsIP31758_1363 NC_009708.1 Protein Homology CDS 1598059 1598604 . + 0 ID=cds1342;Parent=gene1394;Dbxref=Genbank:WP_012104867.1;Name=WP_012104867.1;gbkey=CDS;product=frimbrial protein;protein_id=WP_012104867.1;transl_table=11 NC_009708.1 RefSeq gene 1598761 1599522 . + . ID=gene1395;Name=YPSIP31758_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08205;old_locus_tag=YpsIP31758_1364 NC_009708.1 Protein Homology CDS 1598761 1599522 . + 0 ID=cds1343;Parent=gene1395;Dbxref=Genbank:WP_012104868.1;Name=WP_012104868.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_012104868.1;transl_table=11 NC_009708.1 RefSeq gene 1599650 1601188 . + . ID=gene1396;Name=YPSIP31758_RS08210;end_range=1601188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS08210;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 1599650 1601188 . + 0 ID=cds1344;Parent=gene1396;end_range=1601188,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 1601120 1602322 . + . ID=gene1397;Name=YPSIP31758_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08215 NC_009708.1 Protein Homology CDS 1601120 1602322 . + 0 ID=cds1345;Parent=gene1397;Dbxref=Genbank:WP_042592899.1;Name=WP_042592899.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_042592899.1;transl_table=11 NC_009708.1 RefSeq gene 1602307 1602915 . + . ID=gene1398;Name=YPSIP31758_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08220;old_locus_tag=YpsIP31758_1366 NC_009708.1 Protein Homology CDS 1602307 1602915 . + 0 ID=cds1346;Parent=gene1398;Dbxref=Genbank:WP_011192708.1;Name=WP_011192708.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192708.1;transl_table=11 NC_009708.1 RefSeq gene 1603021 1603545 . + . ID=gene1399;Name=YPSIP31758_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08225;old_locus_tag=YpsIP31758_1367 NC_009708.1 Protein Homology CDS 1603021 1603545 . + 0 ID=cds1347;Parent=gene1399;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11 NC_009708.1 RefSeq gene 1603569 1605071 . + . ID=gene1400;Name=YPSIP31758_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08230;old_locus_tag=YpsIP31758_1368 NC_009708.1 Protein Homology CDS 1603569 1605071 . + 0 ID=cds1348;Parent=gene1400;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11 NC_009708.1 RefSeq gene 1605404 1605889 . + . ID=gene1401;Name=YPSIP31758_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08235;old_locus_tag=YpsIP31758_1369 NC_009708.1 Protein Homology CDS 1605404 1605889 . + 0 ID=cds1349;Parent=gene1401;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NC_009708.1 RefSeq gene 1606163 1606702 . + . ID=gene1402;Name=YPSIP31758_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08240;old_locus_tag=YpsIP31758_1370 NC_009708.1 Protein Homology CDS 1606163 1606702 . + 0 ID=cds1350;Parent=gene1402;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11 NC_009708.1 RefSeq gene 1606706 1608055 . + . ID=gene1403;Name=YPSIP31758_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08245;old_locus_tag=YpsIP31758_1371 NC_009708.1 Protein Homology CDS 1606706 1608055 . + 0 ID=cds1351;Parent=gene1403;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11 NC_009708.1 RefSeq gene 1608052 1609428 . + . ID=gene1404;Name=YPSIP31758_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08250;old_locus_tag=YpsIP31758_1372 NC_009708.1 Protein Homology CDS 1608052 1609428 . + 0 ID=cds1352;Parent=gene1404;Dbxref=Genbank:WP_012104870.1;Name=WP_012104870.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104870.1;transl_table=11 NC_009708.1 RefSeq gene 1609437 1613264 . + . ID=gene1405;Name=YPSIP31758_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08255;old_locus_tag=YpsIP31758_1373 NC_009708.1 Protein Homology CDS 1609437 1613264 . + 0 ID=cds1353;Parent=gene1405;Dbxref=Genbank:WP_011192705.1;Name=WP_011192705.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_011192705.1;transl_table=11 NC_009708.1 RefSeq gene 1613591 1616341 . + . ID=gene1406;Name=YPSIP31758_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08260;old_locus_tag=YpsIP31758_1374 NC_009708.1 Protein Homology CDS 1613591 1616341 . + 0 ID=cds1354;Parent=gene1406;Dbxref=Genbank:WP_012104871.1;Name=WP_012104871.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012104871.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1615804 1616299 . + . ID=id164;gbkey=repeat_region NC_009708.1 RefSeq gene 1616440 1616700 . + . ID=gene1407;Name=YPSIP31758_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08265;old_locus_tag=YpsIP31758_1375 NC_009708.1 Protein Homology CDS 1616440 1616700 . + 0 ID=cds1355;Parent=gene1407;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11 NC_009708.1 RefSeq gene 1616706 1617548 . + . ID=gene1408;Name=YPSIP31758_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08270;old_locus_tag=YpsIP31758_1376 NC_009708.1 Protein Homology CDS 1616706 1617548 . + 0 ID=cds1356;Parent=gene1408;Dbxref=Genbank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354537.1;transl_table=11 NC_009708.1 RefSeq gene 1617568 1618374 . + . ID=gene1409;Name=YPSIP31758_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08275;old_locus_tag=YpsIP31758_1377 NC_009708.1 Protein Homology CDS 1617568 1618374 . + 0 ID=cds1357;Parent=gene1409;Dbxref=Genbank:WP_012104872.1;Name=WP_012104872.1;gbkey=CDS;product=ImpE family protein;protein_id=WP_012104872.1;transl_table=11 NC_009708.1 RefSeq gene 1618438 1618917 . + . ID=gene1410;Name=YPSIP31758_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08280;old_locus_tag=YpsIP31758_1378 NC_009708.1 Protein Homology CDS 1618438 1618917 . + 0 ID=cds1358;Parent=gene1410;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11 NC_009708.1 RefSeq gene 1618942 1619289 . + . ID=gene1411;Name=YPSIP31758_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08285;old_locus_tag=YpsIP31758_1379 NC_009708.1 Protein Homology CDS 1618942 1619289 . + 0 ID=cds1359;Parent=gene1411;Dbxref=Genbank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209687.1;transl_table=11 NC_009708.1 RefSeq gene 1619364 1619705 . - . ID=gene1412;Name=YPSIP31758_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08290;old_locus_tag=YpsIP31758_1380 NC_009708.1 Protein Homology CDS 1619364 1619705 . - 0 ID=cds1360;Parent=gene1412;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11 NC_009708.1 RefSeq gene 1620081 1622120 . - . ID=gene1413;Name=YPSIP31758_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08295;old_locus_tag=YpsIP31758_1381 NC_009708.1 Protein Homology CDS 1620081 1622120 . - 0 ID=cds1361;Parent=gene1413;Dbxref=Genbank:WP_012413816.1;Name=WP_012413816.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413816.1;transl_table=11 NC_009708.1 RefSeq gene 1622125 1622667 . - . ID=gene1414;Name=YPSIP31758_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08300;old_locus_tag=YpsIP31758_1382 NC_009708.1 Protein Homology CDS 1622125 1622667 . - 0 ID=cds1362;Parent=gene1414;Dbxref=Genbank:WP_012104874.1;Name=WP_012104874.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104874.1;transl_table=11 NC_009708.1 RefSeq gene 1622954 1623028 . + . ID=gene1415;Name=YPSIP31758_RS08305;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS08305;old_locus_tag=YpsIP31758_4227 NC_009708.1 tRNAscan-SE tRNA 1622954 1623028 . + . ID=rna51;Parent=gene1415;anticodon=(pos:1622987..1622989);gbkey=tRNA;product=tRNA-Arg NC_009708.1 tRNAscan-SE exon 1622954 1623028 . + . ID=id165;Parent=rna51;anticodon=(pos:1622987..1622989);gbkey=tRNA;product=tRNA-Arg NC_009708.1 RefSeq gene 1623343 1623522 . - . ID=gene1416;Name=YPSIP31758_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08310;old_locus_tag=YpsIP31758_1383 NC_009708.1 GeneMarkS+ CDS 1623343 1623522 . - 0 ID=cds1363;Parent=gene1416;Dbxref=Genbank:WP_012104875.1;Name=WP_012104875.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104875.1;transl_table=11 NC_009708.1 RefSeq gene 1623610 1624554 . - . ID=gene1417;Name=YPSIP31758_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08315;old_locus_tag=YpsIP31758_1384 NC_009708.1 Protein Homology CDS 1623610 1624554 . - 0 ID=cds1364;Parent=gene1417;Dbxref=Genbank:WP_012104876.1;Name=WP_012104876.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104876.1;transl_table=11 NC_009708.1 RefSeq gene 1624575 1625438 . - . ID=gene1418;Name=YPSIP31758_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08320;old_locus_tag=YpsIP31758_1385 NC_009708.1 Protein Homology CDS 1624575 1625438 . - 0 ID=cds1365;Parent=gene1418;Dbxref=Genbank:WP_012104877.1;Name=WP_012104877.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104877.1;transl_table=11 NC_009708.1 RefSeq gene 1626290 1626757 . + . ID=gene1419;Name=YPSIP31758_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08325;old_locus_tag=YpsIP31758_1386 NC_009708.1 Protein Homology CDS 1626290 1626757 . + 0 ID=cds1366;Parent=gene1419;Dbxref=Genbank:WP_002209692.1;Name=WP_002209692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209692.1;transl_table=11 NC_009708.1 RefSeq gene 1627202 1627858 . + . ID=gene1420;Name=YPSIP31758_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08330;old_locus_tag=YpsIP31758_1387 NC_009708.1 Protein Homology CDS 1627202 1627858 . + 0 ID=cds1367;Parent=gene1420;Dbxref=Genbank:WP_012104878.1;Name=WP_012104878.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmA;protein_id=WP_012104878.1;transl_table=11 NC_009708.1 RefSeq gene 1627828 1628487 . + . ID=gene1421;Name=YPSIP31758_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08335;old_locus_tag=YpsIP31758_1388 NC_009708.1 Protein Homology CDS 1627828 1628487 . + 0 ID=cds1368;Parent=gene1421;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11 NC_009708.1 RefSeq gene 1628550 1629287 . + . ID=gene1422;Name=YPSIP31758_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08340;old_locus_tag=YpsIP31758_1389 NC_009708.1 Protein Homology CDS 1628550 1629287 . + 0 ID=cds1369;Parent=gene1422;Dbxref=Genbank:WP_002209695.1;Name=WP_002209695.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_002209695.1;transl_table=11 NC_009708.1 RefSeq gene 1629284 1629646 . + . ID=gene1423;Name=YPSIP31758_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08345;old_locus_tag=YpsIP31758_1390 NC_009708.1 Protein Homology CDS 1629284 1629646 . + 0 ID=cds1370;Parent=gene1423;Dbxref=Genbank:WP_012104879.1;Name=WP_012104879.1;gbkey=CDS;product=hemagglutination activity protein;protein_id=WP_012104879.1;transl_table=11 NC_009708.1 RefSeq gene 1629643 1630137 . + . ID=gene1424;Name=YPSIP31758_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08350;old_locus_tag=YpsIP31758_1391 NC_009708.1 Protein Homology CDS 1629643 1630137 . + 0 ID=cds1371;Parent=gene1424;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11 NC_009708.1 RefSeq gene 1630134 1632104 . + . ID=gene1425;Name=YPSIP31758_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08355;old_locus_tag=YpsIP31758_1392 NC_009708.1 Protein Homology CDS 1630134 1632104 . + 0 ID=cds1372;Parent=gene1425;Dbxref=Genbank:WP_011192697.1;Name=WP_011192697.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=heme lyase subunit CcmF;protein_id=WP_011192697.1;transl_table=11 NC_009708.1 RefSeq gene 1632101 1632667 . + . ID=gene1426;Name=YPSIP31758_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08360;old_locus_tag=YpsIP31758_1393 NC_009708.1 Protein Homology CDS 1632101 1632667 . + 0 ID=cds1373;Parent=gene1426;Dbxref=Genbank:WP_002209699.1;Name=WP_002209699.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=WP_002209699.1;transl_table=11 NC_009708.1 RefSeq gene 1632664 1633176 . + . ID=gene1427;Name=YPSIP31758_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08365;old_locus_tag=YpsIP31758_1394 NC_009708.1 Protein Homology CDS 1632664 1633176 . + 0 ID=cds1374;Parent=gene1427;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NC_009708.1 RefSeq gene 1633176 1634402 . + . ID=gene1428;Name=YPSIP31758_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08370;old_locus_tag=YpsIP31758_1395 NC_009708.1 Protein Homology CDS 1633176 1634402 . + 0 ID=cds1375;Parent=gene1428;Dbxref=Genbank:WP_012104880.1;Name=WP_012104880.1;gbkey=CDS;product=cytochrome C;protein_id=WP_012104880.1;transl_table=11 NC_009708.1 RefSeq gene 1634438 1635202 . + . ID=gene1429;Name=YPSIP31758_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08375;old_locus_tag=YpsIP31758_1396 NC_009708.1 Protein Homology CDS 1634438 1635202 . + 0 ID=cds1376;Parent=gene1429;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11 NC_009708.1 RefSeq gene 1635309 1636574 . - . ID=gene1430;Name=YPSIP31758_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08380;old_locus_tag=YpsIP31758_1397 NC_009708.1 Protein Homology CDS 1635309 1636574 . - 0 ID=cds1377;Parent=gene1430;Dbxref=Genbank:WP_011192695.1;Name=WP_011192695.1;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=WP_011192695.1;transl_table=11 NC_009708.1 RefSeq gene 1637000 1637284 . + . ID=gene1431;Name=YPSIP31758_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08385;old_locus_tag=YpsIP31758_1398 NC_009708.1 Protein Homology CDS 1637000 1637284 . + 0 ID=cds1378;Parent=gene1431;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11 NC_009708.1 RefSeq gene 1637571 1638881 . + . ID=gene1432;Name=YPSIP31758_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08390;old_locus_tag=YpsIP31758_1399 NC_009708.1 Protein Homology CDS 1637571 1638881 . + 0 ID=cds1379;Parent=gene1432;Dbxref=Genbank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_002209704.1;transl_table=11 NC_009708.1 RefSeq gene 1638881 1641205 . + . ID=gene1433;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08395;old_locus_tag=YpsIP31758_1400 NC_009708.1 Protein Homology CDS 1638881 1641205 . + 0 ID=cds1380;Parent=gene1433;Dbxref=Genbank:WP_002209705.1;Name=WP_002209705.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002209705.1;transl_table=11 NC_009708.1 RefSeq gene 1641790 1642281 . + . ID=gene1434;Name=YPSIP31758_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08400;old_locus_tag=YpsIP31758_1402 NC_009708.1 Protein Homology CDS 1641790 1642281 . + 0 ID=cds1381;Parent=gene1434;Dbxref=Genbank:WP_012104883.1;Name=WP_012104883.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_012104883.1;transl_table=11 NC_009708.1 RefSeq gene 1642533 1643063 . - . ID=gene1435;Name=YPSIP31758_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08405;old_locus_tag=YpsIP31758_1403 NC_009708.1 Protein Homology CDS 1642533 1643063 . - 0 ID=cds1382;Parent=gene1435;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11 NC_009708.1 RefSeq gene 1643433 1644365 . + . ID=gene1436;Name=YPSIP31758_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08410;old_locus_tag=YpsIP31758_1404 NC_009708.1 Protein Homology CDS 1643433 1644365 . + 0 ID=cds1383;Parent=gene1436;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NC_009708.1 RefSeq gene 1644442 1645527 . + . ID=gene1437;Name=YPSIP31758_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08415;old_locus_tag=YpsIP31758_1405 NC_009708.1 Protein Homology CDS 1644442 1645527 . + 0 ID=cds1384;Parent=gene1437;Dbxref=Genbank:WP_002209711.1;Name=WP_002209711.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NC_009708.1 RefSeq gene 1645533 1646360 . + . ID=gene1438;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08420;old_locus_tag=YpsIP31758_1406 NC_009708.1 Protein Homology CDS 1645533 1646360 . + 0 ID=cds1385;Parent=gene1438;Dbxref=Genbank:WP_002225365.1;Name=WP_002225365.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11 NC_009708.1 RefSeq gene 1646364 1647170 . + . ID=gene1439;Name=YPSIP31758_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08425;old_locus_tag=YpsIP31758_1407 NC_009708.1 Protein Homology CDS 1646364 1647170 . + 0 ID=cds1386;Parent=gene1439;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11 NC_009708.1 RefSeq gene 1647270 1647812 . + . ID=gene1440;Name=YPSIP31758_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08430;old_locus_tag=YpsIP31758_1408 NC_009708.1 Protein Homology CDS 1647270 1647812 . + 0 ID=cds1387;Parent=gene1440;Dbxref=Genbank:WP_012104884.1;Name=WP_012104884.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104884.1;transl_table=11 NC_009708.1 RefSeq gene 1647870 1648148 . + . ID=gene1441;Name=YPSIP31758_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08435;old_locus_tag=YpsIP31758_1409 NC_009708.1 Protein Homology CDS 1647870 1648148 . + 0 ID=cds1388;Parent=gene1441;Dbxref=Genbank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209715.1;transl_table=11 NC_009708.1 RefSeq gene 1648326 1650395 . - . ID=gene1442;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=YPSIP31758_RS08440;old_locus_tag=YpsIP31758_1410 NC_009708.1 Protein Homology CDS 1648326 1650395 . - 0 ID=cds1389;Parent=gene1442;Dbxref=Genbank:WP_012104886.1;Name=WP_012104886.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_012104886.1;transl_table=11 NC_009708.1 RefSeq gene 1650567 1651790 . + . ID=gene1443;Name=YPSIP31758_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08445;old_locus_tag=YpsIP31758_1411 NC_009708.1 Protein Homology CDS 1650567 1651790 . + 0 ID=cds1390;Parent=gene1443;Dbxref=Genbank:WP_011192688.1;Name=WP_011192688.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_011192688.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1651854 1652030 . + . ID=id166;gbkey=repeat_region NC_009708.1 RefSeq gene 1652197 1652889 . - . ID=gene1444;Name=YPSIP31758_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08450;old_locus_tag=YpsIP31758_1412 NC_009708.1 Protein Homology CDS 1652197 1652889 . - 0 ID=cds1391;Parent=gene1444;Dbxref=Genbank:WP_012104888.1;Name=WP_012104888.1;gbkey=CDS;product=racemase;protein_id=WP_012104888.1;transl_table=11 NC_009708.1 RefSeq gene 1653680 1654210 . + . ID=gene1445;Name=YPSIP31758_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08455;old_locus_tag=YpsIP31758_1413 NC_009708.1 Protein Homology CDS 1653680 1654210 . + 0 ID=cds1392;Parent=gene1445;Dbxref=Genbank:WP_011192686.1;Name=WP_011192686.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_011192686.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1654472 1654643 . + . ID=id167;gbkey=repeat_region NC_009708.1 RefSeq gene 1654738 1655775 . - . ID=gene1446;Name=YPSIP31758_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08460;old_locus_tag=YpsIP31758_1414 NC_009708.1 Protein Homology CDS 1654738 1655775 . - 0 ID=cds1393;Parent=gene1446;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11 NC_009708.1 RefSeq gene 1656060 1656977 . - . ID=gene1447;Name=YPSIP31758_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08465;old_locus_tag=YpsIP31758_1415 NC_009708.1 Protein Homology CDS 1656060 1656977 . - 0 ID=cds1394;Parent=gene1447;Dbxref=Genbank:WP_012104889.1;Name=WP_012104889.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_012104889.1;transl_table=11 NC_009708.1 RefSeq gene 1657055 1657174 . + . ID=gene1448;Name=YPSIP31758_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08470;old_locus_tag=YpsIP31758_1416 NC_009708.1 Protein Homology CDS 1657055 1657174 . + 0 ID=cds1395;Parent=gene1448;Dbxref=Genbank:WP_012104890.1;Name=WP_012104890.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104890.1;transl_table=11 NC_009708.1 RefSeq gene 1657161 1657946 . + . ID=gene1449;Name=YPSIP31758_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08475;old_locus_tag=YpsIP31758_1417 NC_009708.1 Protein Homology CDS 1657161 1657946 . + 0 ID=cds1396;Parent=gene1449;Dbxref=Genbank:WP_012104891.1;Name=WP_012104891.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_012104891.1;transl_table=11 NC_009708.1 RefSeq gene 1657993 1659120 . + . ID=gene1450;Name=YPSIP31758_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08480;old_locus_tag=YpsIP31758_1418 NC_009708.1 Protein Homology CDS 1657993 1659120 . + 0 ID=cds1397;Parent=gene1450;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11 NC_009708.1 RefSeq gene 1659290 1660300 . + . ID=gene1451;Name=YPSIP31758_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08485;old_locus_tag=YpsIP31758_1419 NC_009708.1 Protein Homology CDS 1659290 1660300 . + 0 ID=cds1398;Parent=gene1451;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NC_009708.1 RefSeq gene 1660369 1661199 . + . ID=gene1452;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=YPSIP31758_RS08490;old_locus_tag=YpsIP31758_1420 NC_009708.1 Protein Homology CDS 1660369 1661199 . + 0 ID=cds1399;Parent=gene1452;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11 NC_009708.1 RefSeq gene 1661356 1662018 . + . ID=gene1453;Name=YPSIP31758_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08495;old_locus_tag=YpsIP31758_1421 NC_009708.1 Protein Homology CDS 1661356 1662018 . + 0 ID=cds1400;Parent=gene1453;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11 NC_009708.1 RefSeq gene 1662249 1663163 . + . ID=gene1454;Name=YPSIP31758_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08500;old_locus_tag=YpsIP31758_1422 NC_009708.1 Protein Homology CDS 1662249 1663163 . + 0 ID=cds1401;Parent=gene1454;Dbxref=Genbank:WP_002209729.1;Name=WP_002209729.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NC_009708.1 RefSeq gene 1663412 1664716 . + . ID=gene1455;Name=YPSIP31758_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08505;old_locus_tag=YpsIP31758_1423 NC_009708.1 Protein Homology CDS 1663412 1664716 . + 0 ID=cds1402;Parent=gene1455;Dbxref=Genbank:WP_002209730.1;Name=WP_002209730.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NC_009708.1 RefSeq gene 1664836 1665558 . + . ID=gene1456;Name=YPSIP31758_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08510;old_locus_tag=YpsIP31758_1424 NC_009708.1 Protein Homology CDS 1664836 1665558 . + 0 ID=cds1403;Parent=gene1456;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NC_009708.1 RefSeq gene 1665870 1666379 . + . ID=gene1457;Name=YPSIP31758_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08515;old_locus_tag=YpsIP31758_1425 NC_009708.1 Protein Homology CDS 1665870 1666379 . + 0 ID=cds1404;Parent=gene1457;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NC_009708.1 RefSeq gene 1666392 1667909 . + . ID=gene1458;Name=YPSIP31758_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08520;old_locus_tag=YpsIP31758_1426 NC_009708.1 Protein Homology CDS 1666392 1667909 . + 0 ID=cds1405;Parent=gene1458;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NC_009708.1 RefSeq gene 1668171 1668743 . + . ID=gene1459;Name=YPSIP31758_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08525;old_locus_tag=YpsIP31758_1427 NC_009708.1 Protein Homology CDS 1668171 1668743 . + 0 ID=cds1406;Parent=gene1459;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11 NC_009708.1 RefSeq gene 1669247 1670029 . + . ID=gene1460;Name=YPSIP31758_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08530;old_locus_tag=YpsIP31758_1428 NC_009708.1 Protein Homology CDS 1669247 1670029 . + 0 ID=cds1407;Parent=gene1460;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11 NC_009708.1 RefSeq gene 1670125 1670811 . + . ID=gene1461;Name=YPSIP31758_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08535;old_locus_tag=YpsIP31758_1429 NC_009708.1 Protein Homology CDS 1670125 1670811 . + 0 ID=cds1408;Parent=gene1461;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NC_009708.1 RefSeq gene 1670808 1671524 . + . ID=gene1462;Name=YPSIP31758_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08540;old_locus_tag=YpsIP31758_1430 NC_009708.1 Protein Homology CDS 1670808 1671524 . + 0 ID=cds1409;Parent=gene1462;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11 NC_009708.1 RefSeq gene 1671538 1672335 . + . ID=gene1463;Name=YPSIP31758_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08545;old_locus_tag=YpsIP31758_1431 NC_009708.1 Protein Homology CDS 1671538 1672335 . + 0 ID=cds1410;Parent=gene1463;Dbxref=Genbank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_002209738.1;transl_table=11 NC_009708.1 RefSeq gene 1672466 1673374 . - . ID=gene1464;Name=YPSIP31758_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08550;old_locus_tag=YpsIP31758_1432 NC_009708.1 Protein Homology CDS 1672466 1673374 . - 0 ID=cds1411;Parent=gene1464;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11 NC_009708.1 RefSeq gene 1673728 1674420 . + . ID=gene1465;Name=YPSIP31758_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08555;old_locus_tag=YpsIP31758_1433 NC_009708.1 Protein Homology CDS 1673728 1674420 . + 0 ID=cds1412;Parent=gene1465;Dbxref=Genbank:WP_012104892.1;Name=WP_012104892.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_012104892.1;transl_table=11 NC_009708.1 RefSeq gene 1674608 1675159 . + . ID=gene1466;Name=YPSIP31758_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08560;old_locus_tag=YpsIP31758_1434 NC_009708.1 Protein Homology CDS 1674608 1675159 . + 0 ID=cds1413;Parent=gene1466;Dbxref=Genbank:WP_002264676.1;Name=WP_002264676.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002264676.1;transl_table=11 NC_009708.1 RefSeq gene 1675381 1675929 . + . ID=gene1467;Name=YPSIP31758_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08565;old_locus_tag=YpsIP31758_1436 NC_009708.1 Protein Homology CDS 1675381 1675929 . + 0 ID=cds1414;Parent=gene1467;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11 NC_009708.1 RefSeq gene 1676046 1677302 . - . ID=gene1468;Name=YPSIP31758_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08570;old_locus_tag=YpsIP31758_1437 NC_009708.1 Protein Homology CDS 1676046 1677302 . - 0 ID=cds1415;Parent=gene1468;Dbxref=Genbank:WP_002222248.1;Name=WP_002222248.1;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;protein_id=WP_002222248.1;transl_table=11 NC_009708.1 RefSeq gene 1677315 1677602 . - . ID=gene1469;Name=YPSIP31758_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08575;old_locus_tag=YpsIP31758_1438 NC_009708.1 Protein Homology CDS 1677315 1677602 . - 0 ID=cds1416;Parent=gene1469;Dbxref=Genbank:WP_002264679.1;Name=WP_002264679.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002264679.1;transl_table=11 NC_009708.1 RefSeq gene 1677771 1678214 . - . ID=gene1470;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08580;old_locus_tag=YpsIP31758_1440 NC_009708.1 Protein Homology CDS 1677771 1678214 . - 0 ID=cds1417;Parent=gene1470;Dbxref=Genbank:WP_011192680.1;Name=WP_011192680.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_011192680.1;transl_table=11 NC_009708.1 RefSeq gene 1678581 1679615 . + . ID=gene1471;Name=YPSIP31758_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08585;old_locus_tag=YpsIP31758_1441 NC_009708.1 Protein Homology CDS 1678581 1679615 . + 0 ID=cds1418;Parent=gene1471;Dbxref=Genbank:WP_011192679.1;Name=WP_011192679.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011192679.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1679698 1679867 . + . ID=id168;gbkey=repeat_region NC_009708.1 RefSeq gene 1679881 1682019 . - . ID=gene1472;Name=YPSIP31758_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08590;old_locus_tag=YpsIP31758_1442 NC_009708.1 Protein Homology CDS 1679881 1682019 . - 0 ID=cds1419;Parent=gene1472;Dbxref=Genbank:WP_002265141.1;Name=WP_002265141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NC_009708.1 RefSeq gene 1682202 1683404 . - . ID=gene1473;Name=YPSIP31758_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08595;old_locus_tag=YpsIP31758_1443 NC_009708.1 Protein Homology CDS 1682202 1683404 . - 0 ID=cds1420;Parent=gene1473;Dbxref=Genbank:WP_012104893.1;Name=WP_012104893.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_012104893.1;transl_table=11 NC_009708.1 RefSeq gene 1683394 1683585 . - . ID=gene1474;Name=YPSIP31758_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08600 NC_009708.1 Protein Homology CDS 1683394 1683585 . - 0 ID=cds1421;Parent=gene1474;Dbxref=Genbank:WP_011192677.1;Name=WP_011192677.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192677.1;transl_table=11 NC_009708.1 RefSeq gene 1683826 1684281 . + . ID=gene1475;Name=YPSIP31758_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08605;old_locus_tag=YpsIP31758_1444 NC_009708.1 Protein Homology CDS 1683826 1684281 . + 0 ID=cds1422;Parent=gene1475;Dbxref=Genbank:WP_011192676.1;Name=WP_011192676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192676.1;transl_table=11 NC_009708.1 RefSeq gene 1684681 1685175 . + . ID=gene1476;Name=YPSIP31758_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08610;old_locus_tag=YpsIP31758_1445 NC_009708.1 Protein Homology CDS 1684681 1685175 . + 0 ID=cds1423;Parent=gene1476;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11 NC_009708.1 RefSeq gene 1685340 1685996 . + . ID=gene1477;Name=YPSIP31758_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08615;old_locus_tag=YpsIP31758_1446 NC_009708.1 Protein Homology CDS 1685340 1685996 . + 0 ID=cds1424;Parent=gene1477;Dbxref=Genbank:WP_012104894.1;Name=WP_012104894.1;gbkey=CDS;product=phosphatase;protein_id=WP_012104894.1;transl_table=11 NC_009708.1 RefSeq gene 1686288 1688120 . + . ID=gene1478;Name=YPSIP31758_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08620;old_locus_tag=YpsIP31758_1447 NC_009708.1 Protein Homology CDS 1686288 1688120 . + 0 ID=cds1425;Parent=gene1478;Dbxref=Genbank:WP_012104895.1;Name=WP_012104895.1;gbkey=CDS;product=citrate transporter;protein_id=WP_012104895.1;transl_table=11 NC_009708.1 RefSeq gene 1688597 1688788 . + . ID=gene1479;Name=YPSIP31758_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08625 NC_009708.1 Protein Homology CDS 1688597 1688788 . + 0 ID=cds1426;Parent=gene1479;Dbxref=Genbank:WP_038401858.1;Name=WP_038401858.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401858.1;transl_table=11 NC_009708.1 RefSeq gene 1688835 1689428 . - . ID=gene1480;Name=YPSIP31758_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08630;old_locus_tag=YpsIP31758_1449 NC_009708.1 Protein Homology CDS 1688835 1689428 . - 0 ID=cds1427;Parent=gene1480;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11 NC_009708.1 RefSeq gene 1689579 1690793 . - . ID=gene1481;Name=YPSIP31758_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08635;old_locus_tag=YpsIP31758_1450 NC_009708.1 Protein Homology CDS 1689579 1690793 . - 0 ID=cds1428;Parent=gene1481;Dbxref=Genbank:WP_011192671.1;Name=WP_011192671.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase AlaT;protein_id=WP_011192671.1;transl_table=11 NC_009708.1 RefSeq gene 1690926 1691198 . + . ID=gene1482;Name=YPSIP31758_RS08640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS08640;pseudo=true NC_009708.1 Protein Homology CDS 1690926 1691198 . + 0 ID=cds1429;Parent=gene1482;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1690932..1690934%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 1691650 1692579 . + . ID=gene1483;Name=YPSIP31758_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08645;old_locus_tag=YpsIP31758_1452 NC_009708.1 Protein Homology CDS 1691650 1692579 . + 0 ID=cds1430;Parent=gene1483;Dbxref=Genbank:WP_012104898.1;Name=WP_012104898.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104898.1;transl_table=11 NC_009708.1 RefSeq gene 1693257 1693757 . + . ID=gene1484;Name=YPSIP31758_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08650;old_locus_tag=YpsIP31758_1454 NC_009708.1 Protein Homology CDS 1693257 1693757 . + 0 ID=cds1431;Parent=gene1484;Dbxref=Genbank:WP_002210279.1;Name=WP_002210279.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NC_009708.1 RefSeq gene 1693859 1694542 . + . ID=gene1485;Name=YPSIP31758_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08655;old_locus_tag=YpsIP31758_1455 NC_009708.1 Protein Homology CDS 1693859 1694542 . + 0 ID=cds1432;Parent=gene1485;Dbxref=Genbank:WP_012104900.1;Name=WP_012104900.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_012104900.1;transl_table=11 NC_009708.1 RefSeq gene 1694685 1696481 . + . ID=gene1486;Name=YPSIP31758_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08660;old_locus_tag=YpsIP31758_1456 NC_009708.1 Protein Homology CDS 1694685 1696481 . + 0 ID=cds1433;Parent=gene1486;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NC_009708.1 RefSeq gene 1696484 1697047 . + . ID=gene1487;Name=YPSIP31758_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08665 NC_009708.1 Protein Homology CDS 1696484 1697047 . + 0 ID=cds1434;Parent=gene1487;Dbxref=Genbank:WP_011192670.1;Name=WP_011192670.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_011192670.1;transl_table=11 NC_009708.1 RefSeq gene 1697044 1698429 . + . ID=gene1488;Name=YPSIP31758_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08670;old_locus_tag=YpsIP31758_1458 NC_009708.1 Protein Homology CDS 1697044 1698429 . + 0 ID=cds1435;Parent=gene1488;Dbxref=Genbank:WP_002210276.1;Name=WP_002210276.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_002210276.1;transl_table=11 NC_009708.1 RefSeq gene 1698516 1701260 . + . ID=gene1489;Name=YPSIP31758_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08675;old_locus_tag=YpsIP31758_1459 NC_009708.1 Protein Homology CDS 1698516 1701260 . + 0 ID=cds1436;Parent=gene1489;Dbxref=Genbank:WP_012104901.1;Name=WP_012104901.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit G;protein_id=WP_012104901.1;transl_table=11 NC_009708.1 RefSeq gene 1701257 1702234 . + . ID=gene1490;Name=YPSIP31758_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08680;old_locus_tag=YpsIP31758_1460 NC_009708.1 Protein Homology CDS 1701257 1702234 . + 0 ID=cds1437;Parent=gene1490;Dbxref=Genbank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_002210274.1;transl_table=11 NC_009708.1 RefSeq gene 1702249 1702791 . + . ID=gene1491;Name=YPSIP31758_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08685;old_locus_tag=YpsIP31758_1461 NC_009708.1 Protein Homology CDS 1702249 1702791 . + 0 ID=cds1438;Parent=gene1491;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11 NC_009708.1 RefSeq gene 1702804 1703349 . + . ID=gene1492;Name=YPSIP31758_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08690;old_locus_tag=YpsIP31758_1462 NC_009708.1 Protein Homology CDS 1702804 1703349 . + 0 ID=cds1439;Parent=gene1492;Dbxref=Genbank:WP_002210272.1;Name=WP_002210272.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NC_009708.1 RefSeq gene 1703346 1703648 . + . ID=gene1493;Name=YPSIP31758_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08695;old_locus_tag=YpsIP31758_1463 NC_009708.1 Protein Homology CDS 1703346 1703648 . + 0 ID=cds1440;Parent=gene1493;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11 NC_009708.1 RefSeq gene 1703645 1705489 . + . ID=gene1494;Name=YPSIP31758_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08700;old_locus_tag=YpsIP31758_1464 NC_009708.1 Protein Homology CDS 1703645 1705489 . + 0 ID=cds1441;Parent=gene1494;Dbxref=Genbank:WP_011192667.1;Name=WP_011192667.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_011192667.1;transl_table=11 NC_009708.1 RefSeq gene 1705529 1707061 . + . ID=gene1495;Name=YPSIP31758_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08705;old_locus_tag=YpsIP31758_1465 NC_009708.1 Protein Homology CDS 1705529 1707061 . + 0 ID=cds1442;Parent=gene1495;Dbxref=Genbank:WP_012104902.1;Name=WP_012104902.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_012104902.1;transl_table=11 NC_009708.1 RefSeq gene 1707068 1708531 . + . ID=gene1496;Name=YPSIP31758_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08710;old_locus_tag=YpsIP31758_1466 NC_009708.1 Protein Homology CDS 1707068 1708531 . + 0 ID=cds1443;Parent=gene1496;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11 NC_009708.1 RefSeq gene 1708769 1709962 . + . ID=gene1497;Name=YPSIP31758_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08715;old_locus_tag=YpsIP31758_1467 NC_009708.1 Protein Homology CDS 1708769 1709962 . + 0 ID=cds1444;Parent=gene1497;Dbxref=Genbank:WP_012104903.1;Name=WP_012104903.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104903.1;transl_table=11 NC_009708.1 RefSeq gene 1710300 1710767 . - . ID=gene1498;Name=YPSIP31758_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08720;old_locus_tag=YpsIP31758_1468 NC_009708.1 Protein Homology CDS 1710300 1710767 . - 0 ID=cds1445;Parent=gene1498;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11 NC_009708.1 RefSeq gene 1710845 1711381 . - . ID=gene1499;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08725;old_locus_tag=YpsIP31758_1469 NC_009708.1 Protein Homology CDS 1710845 1711381 . - 0 ID=cds1446;Parent=gene1499;Dbxref=Genbank:WP_012104905.1;Name=WP_012104905.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_012104905.1;transl_table=11 NC_009708.1 RefSeq gene 1711430 1712194 . - . ID=gene1500;Name=YPSIP31758_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08730;old_locus_tag=YpsIP31758_1470 NC_009708.1 Protein Homology CDS 1711430 1712194 . - 0 ID=cds1447;Parent=gene1500;Dbxref=Genbank:WP_012104907.1;Name=WP_012104907.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_012104907.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1712223 1712398 . + . ID=id169;gbkey=repeat_region NC_009708.1 RefSeq gene 1712954 1714237 . - . ID=gene1501;Name=YPSIP31758_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08735;old_locus_tag=YpsIP31758_1472 NC_009708.1 Protein Homology CDS 1712954 1714237 . - 0 ID=cds1448;Parent=gene1501;Dbxref=Genbank:WP_012104908.1;Name=WP_012104908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104908.1;transl_table=11 NC_009708.1 RefSeq gene 1714706 1715698 . + . ID=gene1502;Name=YPSIP31758_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08740;old_locus_tag=YpsIP31758_1473 NC_009708.1 Protein Homology CDS 1714706 1715698 . + 0 ID=cds1449;Parent=gene1502;Dbxref=Genbank:WP_012104909.1;Name=WP_012104909.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012104909.1;transl_table=11 NC_009708.1 RefSeq gene 1716023 1716143 . + . ID=gene1503;Name=YPSIP31758_RS08745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS08745;pseudo=true NC_009708.1 Protein Homology CDS 1716023 1716143 . + 0 ID=cds1450;Parent=gene1503;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 1716162 1717112 . + . ID=gene1504;Name=YPSIP31758_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08750;old_locus_tag=YpsIP31758_1475 NC_009708.1 Protein Homology CDS 1716162 1717112 . + 0 ID=cds1451;Parent=gene1504;Dbxref=Genbank:WP_012104911.1;Name=WP_012104911.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_012104911.1;transl_table=11 NC_009708.1 RefSeq gene 1717691 1719562 . + . ID=gene1505;Name=YPSIP31758_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08755;old_locus_tag=YpsIP31758_1476 NC_009708.1 Protein Homology CDS 1717691 1719562 . + 0 ID=cds1452;Parent=gene1505;Dbxref=Genbank:WP_012104912.1;Name=WP_012104912.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_012104912.1;transl_table=11 NC_009708.1 RefSeq gene 1719628 1719840 . + . ID=gene1506;Name=YPSIP31758_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08760 NC_009708.1 Protein Homology CDS 1719628 1719840 . + 0 ID=cds1453;Parent=gene1506;Dbxref=Genbank:WP_002215888.1;Name=WP_002215888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215888.1;transl_table=11 NC_009708.1 RefSeq gene 1719781 1719924 . - . ID=gene1507;Name=YPSIP31758_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08765;old_locus_tag=YpsIP31758_1477 NC_009708.1 Protein Homology CDS 1719781 1719924 . - 0 ID=cds1454;Parent=gene1507;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11 NC_009708.1 RefSeq gene 1720492 1720800 . + . ID=gene1508;Name=YPSIP31758_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08770;old_locus_tag=YpsIP31758_1479 NC_009708.1 Protein Homology CDS 1720492 1720800 . + 0 ID=cds1455;Parent=gene1508;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11 NC_009708.1 RefSeq gene 1721355 1721999 . + . ID=gene1509;Name=YPSIP31758_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08775;old_locus_tag=YpsIP31758_1480 NC_009708.1 Protein Homology CDS 1721355 1721999 . + 0 ID=cds1456;Parent=gene1509;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11 NC_009708.1 RefSeq gene 1722532 1723899 . + . ID=gene1510;Name=YPSIP31758_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08780;old_locus_tag=YpsIP31758_1481 NC_009708.1 Protein Homology CDS 1722532 1723899 . + 0 ID=cds1457;Parent=gene1510;Dbxref=Genbank:WP_012104913.1;Name=WP_012104913.1;gbkey=CDS;product=isochorismate synthase;protein_id=WP_012104913.1;transl_table=11 NC_009708.1 RefSeq gene 1724127 1725830 . + . ID=gene1511;Name=YPSIP31758_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08785;old_locus_tag=YpsIP31758_1482 NC_009708.1 Protein Homology CDS 1724127 1725830 . + 0 ID=cds1458;Parent=gene1511;Dbxref=Genbank:WP_012104914.1;Name=WP_012104914.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_012104914.1;transl_table=11 NC_009708.1 RefSeq gene 1725827 1726645 . + . ID=gene1512;Name=YPSIP31758_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08790;old_locus_tag=YpsIP31758_1483 NC_009708.1 Protein Homology CDS 1725827 1726645 . + 0 ID=cds1459;Parent=gene1512;Dbxref=Genbank:WP_012104915.1;Name=WP_012104915.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_012104915.1;transl_table=11 NC_009708.1 RefSeq gene 1726659 1727516 . + . ID=gene1513;Name=YPSIP31758_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08795;old_locus_tag=YpsIP31758_1484 NC_009708.1 Protein Homology CDS 1726659 1727516 . + 0 ID=cds1460;Parent=gene1513;Dbxref=Genbank:WP_002210245.1;Name=WP_002210245.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=naphthoate synthase;protein_id=WP_002210245.1;transl_table=11 NC_009708.1 RefSeq gene 1727516 1728487 . + . ID=gene1514;Name=YPSIP31758_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08800;old_locus_tag=YpsIP31758_1485 NC_009708.1 Protein Homology CDS 1727516 1728487 . + 0 ID=cds1461;Parent=gene1514;Dbxref=Genbank:WP_012104916.1;Name=WP_012104916.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_012104916.1;transl_table=11 NC_009708.1 RefSeq gene 1728475 1729890 . + . ID=gene1515;Name=YPSIP31758_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08805;old_locus_tag=YpsIP31758_1486 NC_009708.1 Protein Homology CDS 1728475 1729890 . + 0 ID=cds1462;Parent=gene1515;Dbxref=Genbank:WP_012104917.1;Name=WP_012104917.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_012104917.1;transl_table=11 NC_009708.1 RefSeq gene 1729956 1730915 . + . ID=gene1516;Name=YPSIP31758_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08810;old_locus_tag=YpsIP31758_1487 NC_009708.1 Protein Homology CDS 1729956 1730915 . + 0 ID=cds1463;Parent=gene1516;Dbxref=Genbank:WP_012104918.1;Name=WP_012104918.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_012104918.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1730960 1731133 . + . ID=id170;gbkey=repeat_region NC_009708.1 RefSeq gene 1731297 1731557 . - . ID=gene1517;Name=YPSIP31758_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08815;old_locus_tag=YpsIP31758_1488 NC_009708.1 Protein Homology CDS 1731297 1731557 . - 0 ID=cds1464;Parent=gene1517;Dbxref=Genbank:WP_012104920.1;Name=WP_012104920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104920.1;transl_table=11 NC_009708.1 RefSeq gene 1731845 1732855 . + . ID=gene1518;Name=YPSIP31758_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08820;old_locus_tag=YpsIP31758_1491 NC_009708.1 Protein Homology CDS 1731845 1732855 . + 0 ID=cds1465;Parent=gene1518;Dbxref=Genbank:WP_002230969.1;Name=WP_002230969.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_002230969.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1733400 1733566 . + . ID=id171;gbkey=repeat_region NC_009708.1 RefSeq gene 1733652 1734956 . + . ID=gene1519;Name=YPSIP31758_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08825;old_locus_tag=YpsIP31758_1492 NC_009708.1 Protein Homology CDS 1733652 1734956 . + 0 ID=cds1466;Parent=gene1519;Dbxref=Genbank:WP_012104922.1;Name=WP_012104922.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_012104922.1;transl_table=11 NC_009708.1 RefSeq gene 1735184 1735906 . - . ID=gene1520;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08830;old_locus_tag=YpsIP31758_1493 NC_009708.1 Protein Homology CDS 1735184 1735906 . - 0 ID=cds1467;Parent=gene1520;Dbxref=Genbank:WP_011192649.1;Name=WP_011192649.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_011192649.1;transl_table=11 NC_009708.1 RefSeq gene 1735903 1736559 . - . ID=gene1521;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08835;old_locus_tag=YpsIP31758_1494 NC_009708.1 Protein Homology CDS 1735903 1736559 . - 0 ID=cds1468;Parent=gene1521;Dbxref=Genbank:WP_002210236.1;Name=WP_002210236.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_002210236.1;transl_table=11 NC_009708.1 RefSeq gene 1736594 1737337 . - . ID=gene1522;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08840;old_locus_tag=YpsIP31758_1495 NC_009708.1 Protein Homology CDS 1736594 1737337 . - 0 ID=cds1469;Parent=gene1522;Dbxref=Genbank:WP_011192648.1;Name=WP_011192648.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_011192648.1;transl_table=11 NC_009708.1 RefSeq gene 1737907 1739034 . - . ID=gene1523;Name=YPSIP31758_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08845;old_locus_tag=YpsIP31758_1496 NC_009708.1 Protein Homology CDS 1737907 1739034 . - 0 ID=cds1470;Parent=gene1523;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11 NC_009708.1 RefSeq gene 1739354 1739857 . - . ID=gene1524;Name=YPSIP31758_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08850;old_locus_tag=YpsIP31758_1497 NC_009708.1 Protein Homology CDS 1739354 1739857 . - 0 ID=cds1471;Parent=gene1524;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11 NC_009708.1 RefSeq gene 1740114 1740890 . - . ID=gene1525;Name=YPSIP31758_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08855;old_locus_tag=YpsIP31758_1498 NC_009708.1 Protein Homology CDS 1740114 1740890 . - 0 ID=cds1472;Parent=gene1525;Dbxref=Genbank:WP_012104924.1;Name=WP_012104924.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_012104924.1;transl_table=11 NC_009708.1 RefSeq gene 1740913 1741410 . - . ID=gene1526;Name=YPSIP31758_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08860;old_locus_tag=YpsIP31758_1499 NC_009708.1 Protein Homology CDS 1740913 1741410 . - 0 ID=cds1473;Parent=gene1526;Dbxref=Genbank:WP_012104925.1;Name=WP_012104925.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_012104925.1;transl_table=11 NC_009708.1 RefSeq gene 1741426 1742313 . - . ID=gene1527;Name=YPSIP31758_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08865;old_locus_tag=YpsIP31758_1500 NC_009708.1 Protein Homology CDS 1741426 1742313 . - 0 ID=cds1474;Parent=gene1527;Dbxref=Genbank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002213809.1;transl_table=11 NC_009708.1 RefSeq gene 1742718 1743242 . + . ID=gene1528;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08870;old_locus_tag=YpsIP31758_1501 NC_009708.1 Protein Homology CDS 1742718 1743242 . + 0 ID=cds1475;Parent=gene1528;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11 NC_009708.1 RefSeq gene 1743558 1744496 . + . ID=gene1529;Name=YPSIP31758_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08875;old_locus_tag=YpsIP31758_1502 NC_009708.1 Protein Homology CDS 1743558 1744496 . + 0 ID=cds1476;Parent=gene1529;Dbxref=Genbank:WP_012104926.1;Name=WP_012104926.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_012104926.1;transl_table=11 NC_009708.1 RefSeq gene 1744734 1745306 . + . ID=gene1530;Name=YPSIP31758_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08880;old_locus_tag=YpsIP31758_1503 NC_009708.1 Protein Homology CDS 1744734 1745306 . + 0 ID=cds1477;Parent=gene1530;Dbxref=Genbank:WP_012104927.1;Name=WP_012104927.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104927.1;transl_table=11 NC_009708.1 RefSeq gene 1745493 1746155 . + . ID=gene1531;Name=YPSIP31758_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08885;old_locus_tag=YpsIP31758_1505 NC_009708.1 Protein Homology CDS 1745493 1746155 . + 0 ID=cds1478;Parent=gene1531;Dbxref=Genbank:WP_012104929.1;Name=WP_012104929.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104929.1;transl_table=11 NC_009708.1 RefSeq gene 1746984 1748051 . + . ID=gene1532;Name=YPSIP31758_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08890;old_locus_tag=YpsIP31758_1506 NC_009708.1 Protein Homology CDS 1746984 1748051 . + 0 ID=cds1479;Parent=gene1532;Dbxref=Genbank:WP_024063275.1;Name=WP_024063275.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_024063275.1;transl_table=11 NC_009708.1 RefSeq gene 1748226 1749143 . + . ID=gene1533;Name=YPSIP31758_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08895;old_locus_tag=YpsIP31758_1507 NC_009708.1 Protein Homology CDS 1748226 1749143 . + 0 ID=cds1480;Parent=gene1533;Dbxref=Genbank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210223.1;transl_table=11 NC_009708.1 RefSeq gene 1749200 1750690 . + . ID=gene1534;Name=YPSIP31758_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08900;old_locus_tag=YpsIP31758_1508 NC_009708.1 Protein Homology CDS 1749200 1750690 . + 0 ID=cds1481;Parent=gene1534;Dbxref=Genbank:WP_012104931.1;Name=WP_012104931.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_012104931.1;transl_table=11 NC_009708.1 RefSeq gene 1750687 1751679 . + . ID=gene1535;Name=YPSIP31758_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08905;old_locus_tag=YpsIP31758_1509 NC_009708.1 Protein Homology CDS 1750687 1751679 . + 0 ID=cds1482;Parent=gene1535;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NC_009708.1 RefSeq gene 1751829 1752833 . - . ID=gene1536;Name=YPSIP31758_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08910;old_locus_tag=YpsIP31758_1510 NC_009708.1 Protein Homology CDS 1751829 1752833 . - 0 ID=cds1483;Parent=gene1536;Dbxref=Genbank:WP_011192641.1;Name=WP_011192641.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011192641.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1752900 1753031 . + . ID=id172;gbkey=repeat_region NC_009708.1 RefSeq gene 1753205 1754146 . - . ID=gene1537;Name=YPSIP31758_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08915;old_locus_tag=YpsIP31758_1511 NC_009708.1 Protein Homology CDS 1753205 1754146 . - 0 ID=cds1484;Parent=gene1537;Dbxref=Genbank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210219.1;transl_table=11 NC_009708.1 RefSeq gene 1754249 1755334 . + . ID=gene1538;Name=YPSIP31758_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08920;old_locus_tag=YpsIP31758_1512 NC_009708.1 Protein Homology CDS 1754249 1755334 . + 0 ID=cds1485;Parent=gene1538;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1755368 1755544 . + . ID=id173;gbkey=repeat_region NC_009708.1 RefSeq gene 1755403 1755585 . + . ID=gene1539;Name=YPSIP31758_RS08925;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS08925 NC_009708.1 RefSeq gene 1755964 1757610 . + . ID=gene1540;Name=YPSIP31758_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08930;old_locus_tag=YpsIP31758_1515 NC_009708.1 Protein Homology CDS 1755964 1757610 . + 0 ID=cds1486;Parent=gene1540;Dbxref=Genbank:WP_012104934.1;Name=WP_012104934.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_012104934.1;transl_table=11 NC_009708.1 RefSeq gene 1757727 1758851 . + . ID=gene1541;Name=YPSIP31758_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08935;old_locus_tag=YpsIP31758_1516 NC_009708.1 Protein Homology CDS 1757727 1758851 . + 0 ID=cds1487;Parent=gene1541;Dbxref=Genbank:WP_002213815.1;Name=WP_002213815.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002213815.1;transl_table=11 NC_009708.1 RefSeq gene 1758944 1759909 . + . ID=gene1542;Name=YPSIP31758_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08940;old_locus_tag=YpsIP31758_1517 NC_009708.1 Protein Homology CDS 1758944 1759909 . + 0 ID=cds1488;Parent=gene1542;Dbxref=Genbank:WP_012104935.1;Name=WP_012104935.1;gbkey=CDS;product=dioxygenase subunit beta;protein_id=WP_012104935.1;transl_table=11 NC_009708.1 RefSeq gene 1760564 1762252 . + . ID=gene1543;Name=YPSIP31758_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08945;old_locus_tag=YpsIP31758_1518 NC_009708.1 Protein Homology CDS 1760564 1762252 . + 0 ID=cds1489;Parent=gene1543;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1767120 1767371 . + . ID=id174;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 1767731 1768584 . + . ID=id175;gbkey=repeat_region NC_009708.1 RefSeq gene 1768116 1769420 . + . ID=gene1544;Name=YPSIP31758_RS22565;end_range=1769420,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22565;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 1768116 1769420 . + 0 ID=cds1490;Parent=gene1544;end_range=1769420,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hemagglutinin;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 1770275 1770523 . + . ID=gene1545;Name=YPSIP31758_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08955 NC_009708.1 Protein Homology CDS 1770275 1770523 . + 0 ID=cds1491;Parent=gene1545;Dbxref=Genbank:WP_038402736.1;Name=WP_038402736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038402736.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1770544 1771639 . + . ID=id176;gbkey=repeat_region NC_009708.1 RefSeq gene 1771411 1771803 . + . ID=gene1546;Name=YPSIP31758_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08960 NC_009708.1 Protein Homology CDS 1771411 1771803 . + 0 ID=cds1492;Parent=gene1546;Dbxref=Genbank:WP_041175855.1;Name=WP_041175855.1;gbkey=CDS;product=adhesin;protein_id=WP_041175855.1;transl_table=11 NC_009708.1 RefSeq gene 1772154 1772606 . + . ID=gene1547;Name=YPSIP31758_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08965;old_locus_tag=YpsIP31758_1522 NC_009708.1 Protein Homology CDS 1772154 1772606 . + 0 ID=cds1493;Parent=gene1547;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NC_009708.1 RefSeq gene 1772871 1773950 . - . ID=gene1548;Name=YPSIP31758_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08970;old_locus_tag=YpsIP31758_1524 NC_009708.1 Protein Homology CDS 1772871 1773950 . - 0 ID=cds1494;Parent=gene1548;Dbxref=Genbank:WP_011192635.1;Name=WP_011192635.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192635.1;transl_table=11 NC_009708.1 RefSeq gene 1774050 1775438 . - . ID=gene1549;Name=YPSIP31758_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08975;old_locus_tag=YpsIP31758_1525 NC_009708.1 Protein Homology CDS 1774050 1775438 . - 0 ID=cds1495;Parent=gene1549;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11 NC_009708.1 RefSeq gene 1775455 1776495 . - . ID=gene1550;Name=YPSIP31758_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08980;old_locus_tag=YpsIP31758_1526 NC_009708.1 Protein Homology CDS 1775455 1776495 . - 0 ID=cds1496;Parent=gene1550;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NC_009708.1 RefSeq gene 1776767 1778053 . + . ID=gene1551;Name=YPSIP31758_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08985;old_locus_tag=YpsIP31758_1527 NC_009708.1 Protein Homology CDS 1776767 1778053 . + 0 ID=cds1497;Parent=gene1551;Dbxref=Genbank:WP_002210199.1;Name=WP_002210199.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002210199.1;transl_table=11 NC_009708.1 RefSeq gene 1778162 1779037 . + . ID=gene1552;Name=YPSIP31758_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08990;old_locus_tag=YpsIP31758_1528 NC_009708.1 Protein Homology CDS 1778162 1779037 . + 0 ID=cds1498;Parent=gene1552;Dbxref=Genbank:WP_012104939.1;Name=WP_012104939.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012104939.1;transl_table=11 NC_009708.1 RefSeq gene 1779038 1779862 . + . ID=gene1553;Name=YPSIP31758_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS08995;old_locus_tag=YpsIP31758_1529 NC_009708.1 Protein Homology CDS 1779038 1779862 . + 0 ID=cds1499;Parent=gene1553;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NC_009708.1 RefSeq gene 1780009 1781064 . + . ID=gene1554;Name=YPSIP31758_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09000;old_locus_tag=YpsIP31758_1530 NC_009708.1 Protein Homology CDS 1780009 1781064 . + 0 ID=cds1500;Parent=gene1554;Dbxref=Genbank:WP_011192632.1;Name=WP_011192632.1;gbkey=CDS;product=glycosidase;protein_id=WP_011192632.1;transl_table=11 NC_009708.1 RefSeq gene 1781091 1782029 . + . ID=gene1555;Name=YPSIP31758_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09005;old_locus_tag=YpsIP31758_1531 NC_009708.1 Protein Homology CDS 1781091 1782029 . + 0 ID=cds1501;Parent=gene1555;Dbxref=Genbank:WP_012104940.1;Name=WP_012104940.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104940.1;transl_table=11 NC_009708.1 RefSeq gene 1782152 1783267 . + . ID=gene1556;Name=YPSIP31758_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09010;old_locus_tag=YpsIP31758_1532 NC_009708.1 Protein Homology CDS 1782152 1783267 . + 0 ID=cds1502;Parent=gene1556;Dbxref=Genbank:WP_012104941.1;Name=WP_012104941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104941.1;transl_table=11 NC_009708.1 RefSeq gene 1783306 1784580 . + . ID=gene1557;Name=YPSIP31758_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09015;old_locus_tag=YpsIP31758_1533 NC_009708.1 Protein Homology CDS 1783306 1784580 . + 0 ID=cds1503;Parent=gene1557;Dbxref=Genbank:WP_002210193.1;Name=WP_002210193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210193.1;transl_table=11 NC_009708.1 RefSeq gene 1785139 1786383 . - . ID=gene1558;Name=YPSIP31758_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09020;old_locus_tag=YpsIP31758_1534 NC_009708.1 Protein Homology CDS 1785139 1786383 . - 0 ID=cds1504;Parent=gene1558;Dbxref=Genbank:WP_012104942.1;Name=WP_012104942.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_012104942.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1786721 1788193 . + . ID=id177;gbkey=repeat_region NC_009708.1 RefSeq gene 1788553 1789533 . + . ID=gene1559;Name=YPSIP31758_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09025;old_locus_tag=YpsIP31758_1535 NC_009708.1 Protein Homology CDS 1788553 1789533 . + 0 ID=cds1505;Parent=gene1559;Dbxref=Genbank:WP_012104943.1;Name=WP_012104943.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_012104943.1;transl_table=11 NC_009708.1 RefSeq gene 1789530 1792817 . + . ID=gene1560;Name=YPSIP31758_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09030;old_locus_tag=YpsIP31758_1536 NC_009708.1 Protein Homology CDS 1789530 1792817 . + 0 ID=cds1506;Parent=gene1560;Dbxref=Genbank:WP_012104944.1;Name=WP_012104944.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_012104944.1;transl_table=11 NC_009708.1 RefSeq gene 1792973 1794319 . + . ID=gene1561;Name=YPSIP31758_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09035;old_locus_tag=YpsIP31758_1537 NC_009708.1 Protein Homology CDS 1792973 1794319 . + 0 ID=cds1507;Parent=gene1561;Dbxref=Genbank:WP_012104945.1;Name=WP_012104945.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_012104945.1;transl_table=11 NC_009708.1 RefSeq gene 1794316 1795266 . + . ID=gene1562;Name=YPSIP31758_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09040;old_locus_tag=YpsIP31758_1538 NC_009708.1 Protein Homology CDS 1794316 1795266 . + 0 ID=cds1508;Parent=gene1562;Dbxref=Genbank:WP_012104946.1;Name=WP_012104946.1;gbkey=CDS;product=CRISPR type I-F system protein Csy2;protein_id=WP_012104946.1;transl_table=11 NC_009708.1 RefSeq gene 1795284 1796288 . + . ID=gene1563;Name=YPSIP31758_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09045;old_locus_tag=YpsIP31758_1539 NC_009708.1 Protein Homology CDS 1795284 1796288 . + 0 ID=cds1509;Parent=gene1563;Dbxref=Genbank:WP_002211867.1;Name=WP_002211867.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_002211867.1;transl_table=11 NC_009708.1 RefSeq gene 1796299 1796853 . + . ID=gene1564;Name=YPSIP31758_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09050;old_locus_tag=YpsIP31758_1540 NC_009708.1 Protein Homology CDS 1796299 1796853 . + 0 ID=cds1510;Parent=gene1564;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11 NC_009708.1 RefSeq gene 1796931 1797950 . - . ID=gene1565;Name=YPSIP31758_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09055;old_locus_tag=YpsIP31758_1541 NC_009708.1 Protein Homology CDS 1796931 1797950 . - 0 ID=cds1511;Parent=gene1565;Dbxref=Genbank:WP_012104947.1;Name=WP_012104947.1;gbkey=CDS;product=NADP-dependent aryl-alcohol dehydrogenase;protein_id=WP_012104947.1;transl_table=11 NC_009708.1 RefSeq gene 1797961 1798464 . - . ID=gene1566;Name=YPSIP31758_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09060;old_locus_tag=YpsIP31758_1542 NC_009708.1 Protein Homology CDS 1797961 1798464 . - 0 ID=cds1512;Parent=gene1566;Dbxref=Genbank:WP_011192622.1;Name=WP_011192622.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_011192622.1;transl_table=11 NC_009708.1 RefSeq gene 1798511 1799869 . - . ID=gene1567;Name=YPSIP31758_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09065;old_locus_tag=YpsIP31758_1543 NC_009708.1 Protein Homology CDS 1798511 1799869 . - 0 ID=cds1513;Parent=gene1567;Dbxref=Genbank:WP_012104948.1;Name=WP_012104948.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012104948.1;transl_table=11 NC_009708.1 RefSeq gene 1799993 1800202 . + . ID=gene1568;Name=YPSIP31758_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09070 NC_009708.1 Protein Homology CDS 1799993 1800202 . + 0 ID=cds1514;Parent=gene1568;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11 NC_009708.1 RefSeq gene 1800317 1801243 . + . ID=gene1569;Name=YPSIP31758_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09075;old_locus_tag=YpsIP31758_1545 NC_009708.1 Protein Homology CDS 1800317 1801243 . + 0 ID=cds1515;Parent=gene1569;Dbxref=Genbank:WP_012104949.1;Name=WP_012104949.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012104949.1;transl_table=11 NC_009708.1 RefSeq gene 1801729 1802466 . + . ID=gene1570;Name=YPSIP31758_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09080;old_locus_tag=YpsIP31758_1547 NC_009708.1 Protein Homology CDS 1801729 1802466 . + 0 ID=cds1516;Parent=gene1570;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NC_009708.1 RefSeq gene 1802459 1803103 . - . ID=gene1571;Name=YPSIP31758_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09085;old_locus_tag=YpsIP31758_1546 NC_009708.1 Protein Homology CDS 1802459 1803103 . - 0 ID=cds1517;Parent=gene1571;Dbxref=Genbank:WP_012104951.1;Name=WP_012104951.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_012104951.1;transl_table=11 NC_009708.1 RefSeq gene 1803534 1804460 . + . ID=gene1572;Name=YPSIP31758_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09090;old_locus_tag=YpsIP31758_1548 NC_009708.1 Protein Homology CDS 1803534 1804460 . + 0 ID=cds1518;Parent=gene1572;Dbxref=Genbank:WP_012104952.1;Name=WP_012104952.1;gbkey=CDS;product=DMT superfamliy metabolite exporter;protein_id=WP_012104952.1;transl_table=11 NC_009708.1 RefSeq gene 1804592 1806319 . - . ID=gene1573;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=nhaP2,ycgO;locus_tag=YPSIP31758_RS09095;old_locus_tag=YpsIP31758_1549 NC_009708.1 Protein Homology CDS 1804592 1806319 . - 0 ID=cds1519;Parent=gene1573;Dbxref=Genbank:WP_011192618.1;Name=WP_011192618.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=K+/H+ antiporter NhaP2;protein_id=WP_011192618.1;transl_table=11 NC_009708.1 RefSeq gene 1806663 1806908 . - . ID=gene1574;Name=YPSIP31758_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09100;old_locus_tag=YpsIP31758_1550 NC_009708.1 Protein Homology CDS 1806663 1806908 . - 0 ID=cds1520;Parent=gene1574;Dbxref=Genbank:WP_011192617.1;Name=WP_011192617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192617.1;transl_table=11 NC_009708.1 RefSeq gene 1807468 1807851 . - . ID=gene1575;Name=YPSIP31758_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09105 NC_009708.1 Protein Homology CDS 1807468 1807851 . - 0 ID=cds1521;Parent=gene1575;Dbxref=Genbank:WP_012303967.1;Name=WP_012303967.1;gbkey=CDS;product=glucan biosynthesis protein;protein_id=WP_012303967.1;transl_table=11 NC_009708.1 RefSeq gene 1808370 1809923 . + . ID=gene1576;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;gene_synonym=opgG;locus_tag=YPSIP31758_RS09110;old_locus_tag=YpsIP31758_1552 NC_009708.1 Protein Homology CDS 1808370 1809923 . + 0 ID=cds1522;Parent=gene1576;Dbxref=Genbank:WP_032466951.1;Name=WP_032466951.1;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan;gbkey=CDS;gene=mdoG;product=glucan biosynthesis protein G;protein_id=WP_032466951.1;transl_table=11 NC_009708.1 RefSeq gene 1809916 1812525 . + . ID=gene1577;Name=YPSIP31758_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09115;old_locus_tag=YpsIP31758_1553 NC_009708.1 Protein Homology CDS 1809916 1812525 . + 0 ID=cds1523;Parent=gene1577;Dbxref=Genbank:WP_012303969.1;Name=WP_012303969.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;gbkey=CDS;product=glucosyltransferase;protein_id=WP_012303969.1;transl_table=11 NC_009708.1 RefSeq gene 1812657 1812890 . + . ID=gene1578;Name=YPSIP31758_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09120 NC_009708.1 Protein Homology CDS 1812657 1812890 . + 0 ID=cds1524;Parent=gene1578;Dbxref=Genbank:WP_041175856.1;Name=WP_041175856.1;gbkey=CDS;product=lipoprotein;protein_id=WP_041175856.1;transl_table=11 NC_009708.1 RefSeq gene 1813069 1814607 . - . ID=gene1579;Name=YPSIP31758_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09125;old_locus_tag=YpsIP31758_1555 NC_009708.1 Protein Homology CDS 1813069 1814607 . - 0 ID=cds1525;Parent=gene1579;Dbxref=Genbank:WP_011192613.1;Name=WP_011192613.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_011192613.1;transl_table=11 NC_009708.1 RefSeq gene 1815346 1816269 . - . ID=gene1580;Name=YPSIP31758_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09130;old_locus_tag=YpsIP31758_1556 NC_009708.1 Protein Homology CDS 1815346 1816269 . - 0 ID=cds1526;Parent=gene1580;Dbxref=Genbank:WP_038401393.1;Name=WP_038401393.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=WP_038401393.1;transl_table=11 NC_009708.1 RefSeq gene 1816717 1816878 . + . ID=gene1581;Name=YPSIP31758_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09135 NC_009708.1 Protein Homology CDS 1816717 1816878 . + 0 ID=cds1527;Parent=gene1581;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11 NC_009708.1 RefSeq gene 1817208 1817372 . + . ID=gene1582;Name=YPSIP31758_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09140 NC_009708.1 Protein Homology CDS 1817208 1817372 . + 0 ID=cds1528;Parent=gene1582;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11 NC_009708.1 RefSeq gene 1817559 1817687 . + . ID=gene1583;Name=YPSIP31758_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09145;old_locus_tag=YpsIP31758_1559 NC_009708.1 Protein Homology CDS 1817559 1817687 . + 0 ID=cds1529;Parent=gene1583;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11 NC_009708.1 RefSeq gene 1817731 1818798 . + . ID=gene1584;Name=YPSIP31758_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09150;old_locus_tag=YpsIP31758_1560 NC_009708.1 Protein Homology CDS 1817731 1818798 . + 0 ID=cds1530;Parent=gene1584;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11 NC_009708.1 RefSeq gene 1818947 1820005 . + . ID=gene1585;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=YPSIP31758_RS09155;old_locus_tag=YpsIP31758_1561 NC_009708.1 Protein Homology CDS 1818947 1820005 . + 0 ID=cds1531;Parent=gene1585;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11 NC_009708.1 RefSeq gene 1820577 1821161 . - . ID=gene1586;Name=YPSIP31758_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09160;old_locus_tag=YpsIP31758_1563 NC_009708.1 Protein Homology CDS 1820577 1821161 . - 0 ID=cds1532;Parent=gene1586;Dbxref=Genbank:WP_002230951.1;Name=WP_002230951.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002230951.1;transl_table=11 NC_009708.1 RefSeq gene 1821428 1822543 . - . ID=gene1587;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09165;old_locus_tag=YpsIP31758_1564 NC_009708.1 Protein Homology CDS 1821428 1822543 . - 0 ID=cds1533;Parent=gene1587;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NC_009708.1 RefSeq gene 1822794 1823048 . - . ID=gene1588;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=YPSIP31758_RS09170;old_locus_tag=YpsIP31758_1565 NC_009708.1 Protein Homology CDS 1822794 1823048 . - 0 ID=cds1534;Parent=gene1588;Dbxref=Genbank:WP_011192611.1;Name=WP_011192611.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_011192611.1;transl_table=11 NC_009708.1 RefSeq gene 1823227 1823355 . + . ID=gene1589;Name=YPSIP31758_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09175 NC_009708.1 Protein Homology CDS 1823227 1823355 . + 0 ID=cds1535;Parent=gene1589;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11 NC_009708.1 RefSeq gene 1823554 1823799 . - . ID=gene1590;Name=YPSIP31758_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09180;old_locus_tag=YpsIP31758_1566 NC_009708.1 Protein Homology CDS 1823554 1823799 . - 0 ID=cds1536;Parent=gene1590;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NC_009708.1 RefSeq gene 1824112 1825158 . - . ID=gene1591;Name=YPSIP31758_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09185;old_locus_tag=YpsIP31758_1567 NC_009708.1 Protein Homology CDS 1824112 1825158 . - 0 ID=cds1537;Parent=gene1591;Dbxref=Genbank:WP_012104959.1;Name=WP_012104959.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_012104959.1;transl_table=11 NC_009708.1 RefSeq gene 1825393 1825680 . + . ID=gene1592;Name=YPSIP31758_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09190;old_locus_tag=YpsIP31758_1568 NC_009708.1 Protein Homology CDS 1825393 1825680 . + 0 ID=cds1538;Parent=gene1592;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11 NC_009708.1 RefSeq gene 1825938 1829579 . - . ID=gene1593;Name=YPSIP31758_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09195;old_locus_tag=YpsIP31758_1569 NC_009708.1 Protein Homology CDS 1825938 1829579 . - 0 ID=cds1539;Parent=gene1593;Dbxref=Genbank:WP_041175757.1;Name=WP_041175757.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_041175757.1;transl_table=11 NC_009708.1 RefSeq gene 1830163 1831125 . + . ID=gene1594;Name=YPSIP31758_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09200;old_locus_tag=YpsIP31758_1570 NC_009708.1 Protein Homology CDS 1830163 1831125 . + 0 ID=cds1540;Parent=gene1594;Dbxref=Genbank:WP_012104961.1;Name=WP_012104961.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=23S rRNA pseudouridylate synthase C;protein_id=WP_012104961.1;transl_table=11 NC_009708.1 RefSeq gene 1831248 1831844 . - . ID=gene1595;Name=YPSIP31758_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09205;old_locus_tag=YpsIP31758_1571 NC_009708.1 Protein Homology CDS 1831248 1831844 . - 0 ID=cds1541;Parent=gene1595;Dbxref=Genbank:WP_012104962.1;Name=WP_012104962.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_012104962.1;transl_table=11 NC_009708.1 RefSeq gene 1831986 1832510 . + . ID=gene1596;Name=YPSIP31758_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09210;old_locus_tag=YpsIP31758_1573 NC_009708.1 Protein Homology CDS 1831986 1832510 . + 0 ID=cds1542;Parent=gene1596;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11 NC_009708.1 RefSeq gene 1832523 1832690 . + . ID=gene1597;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09215;old_locus_tag=YpsIP31758_1574 NC_009708.1 Protein Homology CDS 1832523 1832690 . + 0 ID=cds1543;Parent=gene1597;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NC_009708.1 RefSeq gene 1832754 1833758 . + . ID=gene1598;Name=YPSIP31758_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09220;old_locus_tag=YpsIP31758_1575 NC_009708.1 Protein Homology CDS 1832754 1833758 . + 0 ID=cds1544;Parent=gene1598;Dbxref=Genbank:WP_032465670.1;Name=WP_032465670.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_032465670.1;transl_table=11 NC_009708.1 RefSeq gene 1833765 1834715 . + . ID=gene1599;Name=YPSIP31758_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09225;old_locus_tag=YpsIP31758_1576 NC_009708.1 Protein Homology CDS 1833765 1834715 . + 0 ID=cds1545;Parent=gene1599;Dbxref=Genbank:WP_002210933.1;Name=WP_002210933.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NC_009708.1 RefSeq gene 1834753 1835682 . + . ID=gene1600;Name=YPSIP31758_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09230;old_locus_tag=YpsIP31758_1577 NC_009708.1 Protein Homology CDS 1834753 1835682 . + 0 ID=cds1546;Parent=gene1600;Dbxref=Genbank:WP_012104963.1;Name=WP_012104963.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_012104963.1;transl_table=11 NC_009708.1 RefSeq gene 1835696 1836430 . + . ID=gene1601;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09235;old_locus_tag=YpsIP31758_1578 NC_009708.1 Protein Homology CDS 1835696 1836430 . + 0 ID=cds1547;Parent=gene1601;Dbxref=Genbank:WP_012104964.1;Name=WP_012104964.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_012104964.1;transl_table=11 NC_009708.1 RefSeq gene 1836584 1836820 . + . ID=gene1602;Name=YPSIP31758_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09240;old_locus_tag=YpsIP31758_1579 NC_009708.1 Protein Homology CDS 1836584 1836820 . + 0 ID=cds1548;Parent=gene1602;Dbxref=Genbank:WP_002220787.1;Name=WP_002220787.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NC_009708.1 RefSeq gene 1836951 1838156 . + . ID=gene1603;Name=YPSIP31758_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09245;old_locus_tag=YpsIP31758_1580 NC_009708.1 Protein Homology CDS 1836951 1838156 . + 0 ID=cds1549;Parent=gene1603;Dbxref=Genbank:WP_042659576.1;Name=WP_042659576.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_042659576.1;transl_table=11 NC_009708.1 RefSeq gene 1838518 1839324 . + . ID=gene1604;Name=YPSIP31758_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09250;old_locus_tag=YpsIP31758_1581 NC_009708.1 Protein Homology CDS 1838518 1839324 . + 0 ID=cds1550;Parent=gene1604;Dbxref=Genbank:WP_012104967.1;Name=WP_012104967.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_012104967.1;transl_table=11 NC_009708.1 RefSeq gene 1839441 1840466 . + . ID=gene1605;Name=YPSIP31758_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09255;old_locus_tag=YpsIP31758_1582 NC_009708.1 Protein Homology CDS 1839441 1840466 . + 0 ID=cds1551;Parent=gene1605;Dbxref=Genbank:WP_012104968.1;Name=WP_012104968.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_012104968.1;transl_table=11 NC_009708.1 RefSeq gene 1840456 1841094 . + . ID=gene1606;Name=YPSIP31758_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09260;old_locus_tag=YpsIP31758_1583 NC_009708.1 Protein Homology CDS 1840456 1841094 . + 0 ID=cds1552;Parent=gene1606;Dbxref=Genbank:WP_011192604.1;Name=WP_011192604.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_011192604.1;transl_table=11 NC_009708.1 RefSeq gene 1841094 1842116 . + . ID=gene1607;Name=YPSIP31758_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09265;old_locus_tag=YpsIP31758_1584 NC_009708.1 Protein Homology CDS 1841094 1842116 . + 0 ID=cds1553;Parent=gene1607;Dbxref=Genbank:WP_012104969.1;Name=WP_012104969.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_012104969.1;transl_table=11 NC_009708.1 RefSeq gene 1842131 1842940 . + . ID=gene1608;Name=YPSIP31758_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09270;old_locus_tag=YpsIP31758_1585 NC_009708.1 Protein Homology CDS 1842131 1842940 . + 0 ID=cds1554;Parent=gene1608;Dbxref=Genbank:WP_012104970.1;Name=WP_012104970.1;gbkey=CDS;product=DNAse;protein_id=WP_012104970.1;transl_table=11 NC_009708.1 RefSeq gene 1843245 1844678 . + . ID=gene1609;Name=YPSIP31758_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09275;old_locus_tag=YpsIP31758_1586 NC_009708.1 Protein Homology CDS 1843245 1844678 . + 0 ID=cds1555;Parent=gene1609;Dbxref=Genbank:WP_012104971.1;Name=WP_012104971.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIBC;protein_id=WP_012104971.1;transl_table=11 NC_009708.1 RefSeq gene 1845059 1845877 . + . ID=gene1610;Name=YPSIP31758_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09280;old_locus_tag=YpsIP31758_1587 NC_009708.1 Protein Homology CDS 1845059 1845877 . + 0 ID=cds1556;Parent=gene1610;Dbxref=Genbank:WP_002215853.1;Name=WP_002215853.1;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NC_009708.1 RefSeq gene 1846051 1846404 . + . ID=gene1611;Name=YPSIP31758_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09285;old_locus_tag=YpsIP31758_1588 NC_009708.1 Protein Homology CDS 1846051 1846404 . + 0 ID=cds1557;Parent=gene1611;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NC_009708.1 RefSeq gene 1846439 1846828 . + . ID=gene1612;Name=YPSIP31758_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09290;old_locus_tag=YpsIP31758_1589 NC_009708.1 Protein Homology CDS 1846439 1846828 . + 0 ID=cds1558;Parent=gene1612;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11 NC_009708.1 RefSeq gene 1846869 1847444 . + . ID=gene1613;Name=YPSIP31758_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09295;old_locus_tag=YpsIP31758_1590 NC_009708.1 Protein Homology CDS 1846869 1847444 . + 0 ID=cds1559;Parent=gene1613;Dbxref=Genbank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11 NC_009708.1 RefSeq gene 1847425 1848291 . + . ID=gene1614;Name=YPSIP31758_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09300;old_locus_tag=YpsIP31758_1591 NC_009708.1 Protein Homology CDS 1847425 1848291 . + 0 ID=cds1560;Parent=gene1614;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NC_009708.1 RefSeq gene 1848374 1849393 . + . ID=gene1615;Name=YPSIP31758_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09305;old_locus_tag=YpsIP31758_1592 NC_009708.1 Protein Homology CDS 1848374 1849393 . + 0 ID=cds1561;Parent=gene1615;Dbxref=Genbank:WP_038401407.1;Name=WP_038401407.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_038401407.1;transl_table=11 NC_009708.1 RefSeq gene 1849521 1850063 . + . ID=gene1616;Name=YPSIP31758_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09310;old_locus_tag=YpsIP31758_1593 NC_009708.1 Protein Homology CDS 1849521 1850063 . + 0 ID=cds1562;Parent=gene1616;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11 NC_009708.1 RefSeq gene 1850437 1851741 . + . ID=gene1617;Name=YPSIP31758_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09315;old_locus_tag=YpsIP31758_1594 NC_009708.1 Protein Homology CDS 1850437 1851741 . + 0 ID=cds1563;Parent=gene1617;Dbxref=Genbank:WP_002213097.1;Name=WP_002213097.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_002213097.1;transl_table=11 NC_009708.1 RefSeq gene 1852267 1852971 . + . ID=gene1618;Name=YPSIP31758_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09320;old_locus_tag=YpsIP31758_1595 NC_009708.1 Protein Homology CDS 1852267 1852971 . + 0 ID=cds1564;Parent=gene1618;Dbxref=Genbank:WP_012104973.1;Name=WP_012104973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104973.1;transl_table=11 NC_009708.1 RefSeq gene 1852979 1853392 . + . ID=gene1619;Name=YPSIP31758_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09325;old_locus_tag=YpsIP31758_1596 NC_009708.1 Protein Homology CDS 1852979 1853392 . + 0 ID=cds1565;Parent=gene1619;Dbxref=Genbank:WP_012104974.1;Name=WP_012104974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104974.1;transl_table=11 NC_009708.1 RefSeq gene 1853703 1854242 . + . ID=gene1620;Name=YPSIP31758_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09330;old_locus_tag=YpsIP31758_1597 NC_009708.1 Protein Homology CDS 1853703 1854242 . + 0 ID=cds1566;Parent=gene1620;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11 NC_009708.1 RefSeq gene 1854481 1857927 . - . ID=gene1621;Name=YPSIP31758_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09335;old_locus_tag=YpsIP31758_1598 NC_009708.1 Protein Homology CDS 1854481 1857927 . - 0 ID=cds1567;Parent=gene1621;Dbxref=Genbank:WP_012104976.1;Name=WP_012104976.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_012104976.1;transl_table=11 NC_009708.1 RefSeq gene 1858197 1859399 . + . ID=gene1622;Name=YPSIP31758_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09340;old_locus_tag=YpsIP31758_1600 NC_009708.1 Protein Homology CDS 1858197 1859399 . + 0 ID=cds1568;Parent=gene1622;Dbxref=Genbank:WP_011192589.1;Name=WP_011192589.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_011192589.1;transl_table=11 NC_009708.1 RefSeq gene 1859392 1860096 . + . ID=gene1623;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09345;old_locus_tag=YpsIP31758_1601 NC_009708.1 Protein Homology CDS 1859392 1860096 . + 0 ID=cds1569;Parent=gene1623;Dbxref=Genbank:WP_002210923.1;Name=WP_002210923.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NC_009708.1 RefSeq gene 1860096 1861343 . + . ID=gene1624;Name=YPSIP31758_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09350;old_locus_tag=YpsIP31758_1602 NC_009708.1 Protein Homology CDS 1860096 1861343 . + 0 ID=cds1570;Parent=gene1624;Dbxref=Genbank:WP_012104977.1;Name=WP_012104977.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_012104977.1;transl_table=11 NC_009708.1 RefSeq gene 1861362 1862276 . + . ID=gene1625;Name=YPSIP31758_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09355;old_locus_tag=YpsIP31758_1603 NC_009708.1 Protein Homology CDS 1861362 1862276 . + 0 ID=cds1571;Parent=gene1625;Dbxref=Genbank:WP_012104978.1;Name=WP_012104978.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_012104978.1;transl_table=11 NC_009708.1 RefSeq gene 1862325 1863161 . + . ID=gene1626;Name=YPSIP31758_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09360;old_locus_tag=YpsIP31758_1604 NC_009708.1 Protein Homology CDS 1862325 1863161 . + 0 ID=cds1572;Parent=gene1626;Dbxref=Genbank:WP_012104979.1;Name=WP_012104979.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_012104979.1;transl_table=11 NC_009708.1 RefSeq gene 1863491 1864726 . + . ID=gene1627;Name=YPSIP31758_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09365;old_locus_tag=YpsIP31758_1605 NC_009708.1 Protein Homology CDS 1863491 1864726 . + 0 ID=cds1573;Parent=gene1627;Dbxref=Genbank:WP_012104980.1;Name=WP_012104980.1;gbkey=CDS;product=peptidase T;protein_id=WP_012104980.1;transl_table=11 NC_009708.1 RefSeq gene 1864959 1866080 . - . ID=gene1628;Name=YPSIP31758_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09370;old_locus_tag=YpsIP31758_1606 NC_009708.1 Protein Homology CDS 1864959 1866080 . - 0 ID=cds1574;Parent=gene1628;Dbxref=Genbank:WP_012104981.1;Name=WP_012104981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104981.1;transl_table=11 NC_009708.1 RefSeq gene 1866164 1867618 . - . ID=gene1629;Name=YPSIP31758_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09375;old_locus_tag=YpsIP31758_1607 NC_009708.1 Protein Homology CDS 1866164 1867618 . - 0 ID=cds1575;Parent=gene1629;Dbxref=Genbank:WP_012104982.1;Name=WP_012104982.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_012104982.1;transl_table=11 NC_009708.1 RefSeq gene 1867624 1868295 . - . ID=gene1630;Name=YPSIP31758_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09380;old_locus_tag=YpsIP31758_1608 NC_009708.1 Protein Homology CDS 1867624 1868295 . - 0 ID=cds1576;Parent=gene1630;Dbxref=Genbank:WP_002230788.1;Name=WP_002230788.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002230788.1;transl_table=11 NC_009708.1 RefSeq gene 1868506 1869129 . - . ID=gene1631;Name=YPSIP31758_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09385;old_locus_tag=YpsIP31758_1609 NC_009708.1 Protein Homology CDS 1868506 1869129 . - 0 ID=cds1577;Parent=gene1631;Dbxref=Genbank:WP_012104984.1;Name=WP_012104984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104984.1;transl_table=11 NC_009708.1 RefSeq gene 1869308 1870678 . - . ID=gene1632;Name=YPSIP31758_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09390;old_locus_tag=YpsIP31758_1610 NC_009708.1 Protein Homology CDS 1869308 1870678 . - 0 ID=cds1578;Parent=gene1632;Dbxref=Genbank:WP_002230790.1;Name=WP_002230790.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002230790.1;transl_table=11 NC_009708.1 RefSeq gene 1870739 1871365 . - . ID=gene1633;Name=YPSIP31758_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09395;old_locus_tag=YpsIP31758_1611 NC_009708.1 Protein Homology CDS 1870739 1871365 . - 0 ID=cds1579;Parent=gene1633;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11 NC_009708.1 RefSeq gene 1871423 1872538 . - . ID=gene1634;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09400;old_locus_tag=YpsIP31758_1612 NC_009708.1 Protein Homology CDS 1871423 1872538 . - 0 ID=cds1580;Parent=gene1634;Dbxref=Genbank:WP_012104985.1;Name=WP_012104985.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_012104985.1;transl_table=11 NC_009708.1 RefSeq gene 1872725 1873171 . - . ID=gene1635;Name=YPSIP31758_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09405;old_locus_tag=YpsIP31758_1613 NC_009708.1 Protein Homology CDS 1872725 1873171 . - 0 ID=cds1581;Parent=gene1635;Dbxref=Genbank:WP_012104986.1;Name=WP_012104986.1;gbkey=CDS;product=phosphatase;protein_id=WP_012104986.1;transl_table=11 NC_009708.1 RefSeq gene 1873164 1873790 . - . ID=gene1636;Name=YPSIP31758_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09410;old_locus_tag=YpsIP31758_1614 NC_009708.1 Protein Homology CDS 1873164 1873790 . - 0 ID=cds1582;Parent=gene1636;Dbxref=Genbank:WP_012104987.1;Name=WP_012104987.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_012104987.1;transl_table=11 NC_009708.1 RefSeq gene 1873921 1875174 . + . ID=gene1637;Name=YPSIP31758_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09415;old_locus_tag=YpsIP31758_1615 NC_009708.1 Protein Homology CDS 1873921 1875174 . + 0 ID=cds1583;Parent=gene1637;Dbxref=Genbank:WP_002210910.1;Name=WP_002210910.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NC_009708.1 RefSeq gene 1875320 1876363 . - . ID=gene1638;Name=YPSIP31758_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09420;old_locus_tag=YpsIP31758_1616 NC_009708.1 Protein Homology CDS 1875320 1876363 . - 0 ID=cds1584;Parent=gene1638;Dbxref=Genbank:WP_002210909.1;Name=WP_002210909.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_002210909.1;transl_table=11 NC_009708.1 RefSeq gene 1876623 1876883 . - . ID=gene1639;Name=YPSIP31758_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09425;old_locus_tag=YpsIP31758_1617 NC_009708.1 Protein Homology CDS 1876623 1876883 . - 0 ID=cds1585;Parent=gene1639;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NC_009708.1 RefSeq gene 1877003 1878583 . - . ID=gene1640;Name=YPSIP31758_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09430;old_locus_tag=YpsIP31758_1618 NC_009708.1 Protein Homology CDS 1877003 1878583 . - 0 ID=cds1586;Parent=gene1640;Dbxref=Genbank:WP_012104988.1;Name=WP_012104988.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_012104988.1;transl_table=11 NC_009708.1 RefSeq gene 1879503 1880360 . - . ID=gene1641;Name=YPSIP31758_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09435;old_locus_tag=YpsIP31758_1619 NC_009708.1 Protein Homology CDS 1879503 1880360 . - 0 ID=cds1587;Parent=gene1641;Dbxref=Genbank:WP_012104989.1;Name=WP_012104989.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_012104989.1;transl_table=11 NC_009708.1 RefSeq gene 1880520 1880903 . + . ID=gene1642;Name=YPSIP31758_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09440;old_locus_tag=YpsIP31758_1620 NC_009708.1 Protein Homology CDS 1880520 1880903 . + 0 ID=cds1588;Parent=gene1642;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NC_009708.1 RefSeq gene 1880961 1881128 . + . ID=gene1643;Name=YPSIP31758_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09445;old_locus_tag=YpsIP31758_1621 NC_009708.1 Protein Homology CDS 1880961 1881128 . + 0 ID=cds1589;Parent=gene1643;Dbxref=Genbank:WP_012104990.1;Name=WP_012104990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104990.1;transl_table=11 NC_009708.1 RefSeq gene 1881435 1882760 . + . ID=gene1644;Name=YPSIP31758_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09450;old_locus_tag=YpsIP31758_1622 NC_009708.1 Protein Homology CDS 1881435 1882760 . + 0 ID=cds1590;Parent=gene1644;Dbxref=Genbank:WP_011192581.1;Name=WP_011192581.1;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=WP_011192581.1;transl_table=11 NC_009708.1 RefSeq gene 1883076 1883279 . - . ID=gene1645;Name=YPSIP31758_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09455;old_locus_tag=YpsIP31758_1623 NC_009708.1 Protein Homology CDS 1883076 1883279 . - 0 ID=cds1591;Parent=gene1645;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11 NC_009708.1 RefSeq gene 1883582 1884481 . - . ID=gene1646;Name=YPSIP31758_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09460;old_locus_tag=YpsIP31758_1624 NC_009708.1 Protein Homology CDS 1883582 1884481 . - 0 ID=cds1592;Parent=gene1646;Dbxref=Genbank:WP_012104991.1;Name=WP_012104991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104991.1;transl_table=11 NC_009708.1 RefSeq gene 1884573 1885022 . - . ID=gene1647;Name=YPSIP31758_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09465;old_locus_tag=YpsIP31758_1625 NC_009708.1 Protein Homology CDS 1884573 1885022 . - 0 ID=cds1593;Parent=gene1647;Dbxref=Genbank:WP_002210900.1;Name=WP_002210900.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NC_009708.1 RefSeq gene 1885483 1886016 . - . ID=gene1648;Name=YPSIP31758_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09470;old_locus_tag=YpsIP31758_1627 NC_009708.1 Protein Homology CDS 1885483 1886016 . - 0 ID=cds1594;Parent=gene1648;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11 NC_009708.1 RefSeq gene 1886300 1887310 . - . ID=gene1649;Name=YPSIP31758_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09475;old_locus_tag=YpsIP31758_1628 NC_009708.1 Protein Homology CDS 1886300 1887310 . - 0 ID=cds1595;Parent=gene1649;Dbxref=Genbank:WP_012104993.1;Name=WP_012104993.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_012104993.1;transl_table=11 NC_009708.1 RefSeq gene 1887718 1890918 . - . ID=gene1650;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09480;old_locus_tag=YpsIP31758_1629 NC_009708.1 Protein Homology CDS 1887718 1890918 . - 0 ID=cds1596;Parent=gene1650;Dbxref=Genbank:WP_012104994.1;Name=WP_012104994.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_012104994.1;transl_table=11 NC_009708.1 cmsearch region 1891278 1891720 . + . ID=id178;Note=cspA;gbkey=misc_feature NC_009708.1 RefSeq gene 1891459 1891671 . + . ID=gene1651;Name=YPSIP31758_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09485;old_locus_tag=YpsIP31758_5000 NC_009708.1 Protein Homology CDS 1891459 1891671 . + 0 ID=cds1597;Parent=gene1651;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11 NC_009708.1 RefSeq gene 1891886 1892077 . + . ID=gene1652;Name=YPSIP31758_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09490;old_locus_tag=YpsIP31758_1630 NC_009708.1 Protein Homology CDS 1891886 1892077 . + 0 ID=cds1598;Parent=gene1652;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NC_009708.1 RefSeq gene 1892260 1893966 . - . ID=gene1653;Name=YPSIP31758_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09495;old_locus_tag=YpsIP31758_1631 NC_009708.1 Protein Homology CDS 1892260 1893966 . - 0 ID=cds1599;Parent=gene1653;Dbxref=Genbank:WP_041175857.1;Name=WP_041175857.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_041175857.1;transl_table=11 NC_009708.1 RefSeq gene 1894597 1894773 . + . ID=gene1654;Name=YPSIP31758_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09500 NC_009708.1 Protein Homology CDS 1894597 1894773 . + 0 ID=cds1600;Parent=gene1654;Dbxref=Genbank:WP_032466480.1;Name=WP_032466480.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466480.1;transl_table=11 NC_009708.1 RefSeq gene 1895125 1895823 . + . ID=gene1655;Name=YPSIP31758_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09505;old_locus_tag=YpsIP31758_1632 NC_009708.1 Protein Homology CDS 1895125 1895823 . + 0 ID=cds1601;Parent=gene1655;Dbxref=Genbank:WP_011192576.1;Name=WP_011192576.1;gbkey=CDS;product=magnesium transporter;protein_id=WP_011192576.1;transl_table=11 NC_009708.1 RefSeq gene 1896228 1898927 . + . ID=gene1656;Name=YPSIP31758_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09510;old_locus_tag=YpsIP31758_1633 NC_009708.1 Protein Homology CDS 1896228 1898927 . + 0 ID=cds1602;Parent=gene1656;Dbxref=Genbank:WP_012104996.1;Name=WP_012104996.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_012104996.1;transl_table=11 NC_009708.1 RefSeq gene 1900115 1900465 . + . ID=gene1657;Name=YPSIP31758_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09515;old_locus_tag=YpsIP31758_1634 NC_009708.1 Protein Homology CDS 1900115 1900465 . + 0 ID=cds1603;Parent=gene1657;Dbxref=Genbank:WP_011192574.1;Name=WP_011192574.1;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;gbkey=CDS;product=flagellar transcriptional regulator FlhD;protein_id=WP_011192574.1;transl_table=11 NC_009708.1 RefSeq gene 1900469 1901050 . + . ID=gene1658;Name=YPSIP31758_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09520;old_locus_tag=YpsIP31758_1635 NC_009708.1 Protein Homology CDS 1900469 1901050 . + 0 ID=cds1604;Parent=gene1658;Dbxref=Genbank:WP_002210889.1;Name=WP_002210889.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210889.1;transl_table=11 NC_009708.1 RefSeq gene 1901255 1902142 . + . ID=gene1659;Name=YPSIP31758_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09525;old_locus_tag=YpsIP31758_1636 NC_009708.1 Protein Homology CDS 1901255 1902142 . + 0 ID=cds1605;Parent=gene1659;Dbxref=Genbank:WP_011192573.1;Name=WP_011192573.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_011192573.1;transl_table=11 NC_009708.1 RefSeq gene 1902139 1903017 . + . ID=gene1660;Name=YPSIP31758_RS09530;end_range=1903017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS09530;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 1902139 1903017 . + 0 ID=cds1606;Parent=gene1660;end_range=1903017,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 1903457 1905604 . + . ID=gene1661;Name=YPSIP31758_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09535;old_locus_tag=YpsIP31758_1638 NC_009708.1 Protein Homology CDS 1903457 1905604 . + 0 ID=cds1607;Parent=gene1661;Dbxref=Genbank:WP_041175758.1;Name=WP_041175758.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_041175758.1;transl_table=11 NC_009708.1 RefSeq gene 1905767 1906264 . + . ID=gene1662;Name=YPSIP31758_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09540;old_locus_tag=YpsIP31758_1639 NC_009708.1 Protein Homology CDS 1905767 1906264 . + 0 ID=cds1608;Parent=gene1662;Dbxref=Genbank:WP_011192570.1;Name=WP_011192570.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_011192570.1;transl_table=11 NC_009708.1 RefSeq gene 1906884 1909748 . + . ID=gene1663;Name=YPSIP31758_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09545;old_locus_tag=YpsIP31758_1640 NC_009708.1 Protein Homology CDS 1906884 1909748 . + 0 ID=cds1609;Parent=gene1663;Dbxref=Genbank:WP_012105000.1;Name=WP_012105000.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105000.1;transl_table=11 NC_009708.1 RefSeq gene 1909817 1910518 . + . ID=gene1664;Name=YPSIP31758_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09550;old_locus_tag=YpsIP31758_1641 NC_009708.1 Protein Homology CDS 1909817 1910518 . + 0 ID=cds1610;Parent=gene1664;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11 NC_009708.1 RefSeq gene 1910759 1912432 . + . ID=gene1665;Name=YPSIP31758_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09555;old_locus_tag=YpsIP31758_1642 NC_009708.1 Protein Homology CDS 1910759 1912432 . + 0 ID=cds1611;Parent=gene1665;Dbxref=Genbank:WP_011192568.1;Name=WP_011192568.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_011192568.1;transl_table=11 NC_009708.1 RefSeq gene 1912616 1914226 . + . ID=gene1666;Name=YPSIP31758_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09560;old_locus_tag=YpsIP31758_1643 NC_009708.1 Protein Homology CDS 1912616 1914226 . + 0 ID=cds1612;Parent=gene1666;Dbxref=Genbank:WP_002220817.1;Name=WP_002220817.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002220817.1;transl_table=11 NC_009708.1 RefSeq gene 1914399 1915271 . + . ID=gene1667;Name=YPSIP31758_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09565;old_locus_tag=YpsIP31758_1644 NC_009708.1 Protein Homology CDS 1914399 1915271 . + 0 ID=cds1613;Parent=gene1667;Dbxref=Genbank:WP_002214065.1;Name=WP_002214065.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_002214065.1;transl_table=11 NC_009708.1 RefSeq gene 1915271 1916320 . + . ID=gene1668;Name=YPSIP31758_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09570;old_locus_tag=YpsIP31758_1645 NC_009708.1 Protein Homology CDS 1915271 1916320 . + 0 ID=cds1614;Parent=gene1668;Dbxref=Genbank:WP_002210874.1;Name=WP_002210874.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_002210874.1;transl_table=11 NC_009708.1 RefSeq gene 1916421 1916810 . + . ID=gene1669;Name=YPSIP31758_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09575;old_locus_tag=YpsIP31758_1646 NC_009708.1 Protein Homology CDS 1916421 1916810 . + 0 ID=cds1615;Parent=gene1669;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11 NC_009708.1 RefSeq gene 1916820 1917464 . + . ID=gene1670;Name=YPSIP31758_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09580;old_locus_tag=YpsIP31758_1647 NC_009708.1 Protein Homology CDS 1916820 1917464 . + 0 ID=cds1616;Parent=gene1670;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NC_009708.1 RefSeq gene 1917778 1917897 . - . ID=gene1671;Name=YPSIP31758_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09585;old_locus_tag=YpsIP31758_1648 NC_009708.1 Protein Homology CDS 1917778 1917897 . - 0 ID=cds1617;Parent=gene1671;Dbxref=Genbank:WP_012105001.1;Name=WP_012105001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105001.1;transl_table=11 NC_009708.1 RefSeq gene 1918028 1918792 . + . ID=gene1672;Name=YPSIP31758_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09590;old_locus_tag=YpsIP31758_1649 NC_009708.1 Protein Homology CDS 1918028 1918792 . + 0 ID=cds1618;Parent=gene1672;Dbxref=Genbank:WP_011192565.1;Name=WP_011192565.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011192565.1;transl_table=11 NC_009708.1 RefSeq gene 1919149 1921791 . + . ID=gene1673;Name=YPSIP31758_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09595;old_locus_tag=YpsIP31758_1650 NC_009708.1 Protein Homology CDS 1919149 1921791 . + 0 ID=cds1619;Parent=gene1673;Dbxref=Genbank:WP_012105002.1;Name=WP_012105002.1;gbkey=CDS;product=hemagglutination repeat-containing protein;protein_id=WP_012105002.1;transl_table=11 NC_009708.1 RefSeq gene 1921891 1922844 . + . ID=gene1674;Name=YPSIP31758_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09600;old_locus_tag=YpsIP31758_1651 NC_009708.1 Protein Homology CDS 1921891 1922844 . + 0 ID=cds1620;Parent=gene1674;Dbxref=Genbank:WP_012105003.1;Name=WP_012105003.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105003.1;transl_table=11 NC_009708.1 RefSeq gene 1923462 1924691 . - . ID=gene1675;Name=YPSIP31758_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09605;old_locus_tag=YpsIP31758_1652 NC_009708.1 Protein Homology CDS 1923462 1924691 . - 0 ID=cds1621;Parent=gene1675;Dbxref=Genbank:WP_002210868.1;Name=WP_002210868.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_002210868.1;transl_table=11 NC_009708.1 RefSeq gene 1925093 1925287 . - . ID=gene1676;Name=YPSIP31758_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09610 NC_009708.1 Protein Homology CDS 1925093 1925287 . - 0 ID=cds1622;Parent=gene1676;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NC_009708.1 RefSeq gene 1925836 1926084 . + . ID=gene1677;Name=YPSIP31758_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09615;old_locus_tag=YpsIP31758_1654 NC_009708.1 Protein Homology CDS 1925836 1926084 . + 0 ID=cds1623;Parent=gene1677;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1926147 1926307 . + . ID=id179;gbkey=repeat_region NC_009708.1 RefSeq gene 1926477 1927733 . + . ID=gene1678;Name=YPSIP31758_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09620;old_locus_tag=YpsIP31758_1656 NC_009708.1 Protein Homology CDS 1926477 1927733 . + 0 ID=cds1624;Parent=gene1678;Dbxref=Genbank:WP_002210864.1;Name=WP_002210864.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210864.1;transl_table=11 NC_009708.1 RefSeq gene 1927888 1928121 . + . ID=gene1679;Name=YPSIP31758_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09625;old_locus_tag=YpsIP31758_1657 NC_009708.1 Protein Homology CDS 1927888 1928121 . + 0 ID=cds1625;Parent=gene1679;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11 NC_009708.1 RefSeq gene 1928909 1929298 . + . ID=gene1680;Name=YPSIP31758_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09630;old_locus_tag=YpsIP31758_1659 NC_009708.1 Protein Homology CDS 1928909 1929298 . + 0 ID=cds1626;Parent=gene1680;Dbxref=Genbank:WP_002215943.1;Name=WP_002215943.1;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002215943.1;transl_table=11 NC_009708.1 RefSeq gene 1929408 1929647 . - . ID=gene1681;Name=YPSIP31758_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09635;old_locus_tag=YpsIP31758_1660 NC_009708.1 Protein Homology CDS 1929408 1929647 . - 0 ID=cds1627;Parent=gene1681;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11 NC_009708.1 RefSeq gene 1929855 1930844 . - . ID=gene1682;Name=YPSIP31758_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09640;old_locus_tag=YpsIP31758_1661 NC_009708.1 Protein Homology CDS 1929855 1930844 . - 0 ID=cds1628;Parent=gene1682;Dbxref=Genbank:WP_011192561.1;Name=WP_011192561.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_011192561.1;transl_table=11 NC_009708.1 RefSeq gene 1931050 1933497 . - . ID=gene1683;Name=YPSIP31758_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09645;old_locus_tag=YpsIP31758_1663 NC_009708.1 Protein Homology CDS 1931050 1933497 . - 0 ID=cds1629;Parent=gene1683;Dbxref=Genbank:WP_012105004.1;Name=WP_012105004.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105004.1;transl_table=11 NC_009708.1 RefSeq gene 1933567 1934319 . - . ID=gene1684;Name=YPSIP31758_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09650;old_locus_tag=YpsIP31758_1664 NC_009708.1 Protein Homology CDS 1933567 1934319 . - 0 ID=cds1630;Parent=gene1684;Dbxref=Genbank:WP_012105005.1;Name=WP_012105005.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_012105005.1;transl_table=11 NC_009708.1 RefSeq gene 1934350 1934907 . - . ID=gene1685;Name=YPSIP31758_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09655;old_locus_tag=YpsIP31758_1665 NC_009708.1 Protein Homology CDS 1934350 1934907 . - 0 ID=cds1631;Parent=gene1685;Dbxref=Genbank:WP_002216611.1;Name=WP_002216611.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002216611.1;transl_table=11 NC_009708.1 RefSeq gene 1934928 1935419 . - . ID=gene1686;Name=YPSIP31758_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09660;old_locus_tag=YpsIP31758_1666 NC_009708.1 Protein Homology CDS 1934928 1935419 . - 0 ID=cds1632;Parent=gene1686;Dbxref=Genbank:WP_002210853.1;Name=WP_002210853.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210853.1;transl_table=11 NC_009708.1 RefSeq gene 1935464 1936018 . - . ID=gene1687;Name=YPSIP31758_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09665;old_locus_tag=YpsIP31758_1667 NC_009708.1 Protein Homology CDS 1935464 1936018 . - 0 ID=cds1633;Parent=gene1687;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11 NC_009708.1 RefSeq gene 1936499 1939150 . - . ID=gene1688;Name=YPSIP31758_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09670;old_locus_tag=YpsIP31758_1668 NC_009708.1 Protein Homology CDS 1936499 1939150 . - 0 ID=cds1634;Parent=gene1688;Dbxref=Genbank:WP_012105006.1;Name=WP_012105006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105006.1;transl_table=11 NC_009708.1 RefSeq gene 1939119 1940366 . - . ID=gene1689;Name=YPSIP31758_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09675;old_locus_tag=YpsIP31758_1669 NC_009708.1 Protein Homology CDS 1939119 1940366 . - 0 ID=cds1635;Parent=gene1689;Dbxref=Genbank:WP_012105007.1;Name=WP_012105007.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105007.1;transl_table=11 NC_009708.1 RefSeq gene 1940598 1941095 . + . ID=gene1690;Name=YPSIP31758_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09680;old_locus_tag=YpsIP31758_1670 NC_009708.1 Protein Homology CDS 1940598 1941095 . + 0 ID=cds1636;Parent=gene1690;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11 NC_009708.1 RefSeq gene 1941191 1941904 . + . ID=gene1691;Name=YPSIP31758_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09685;old_locus_tag=YpsIP31758_1671 NC_009708.1 Protein Homology CDS 1941191 1941904 . + 0 ID=cds1637;Parent=gene1691;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NC_009708.1 RefSeq gene 1941924 1943996 . + . ID=gene1692;Name=YPSIP31758_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09690;old_locus_tag=YpsIP31758_1672 NC_009708.1 Protein Homology CDS 1941924 1943996 . + 0 ID=cds1638;Parent=gene1692;Dbxref=Genbank:WP_012105008.1;Name=WP_012105008.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_012105008.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1944040 1944760 . + . ID=id180;gbkey=repeat_region NC_009708.1 RefSeq gene 1944190 1944648 . + . ID=gene1693;Name=YPSIP31758_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09695;old_locus_tag=YpsIP31758_1673 NC_009708.1 Protein Homology CDS 1944190 1944648 . + 0 ID=cds1639;Parent=gene1693;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 1945180 1946061 . + . ID=gene1694;Name=YPSIP31758_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09700;old_locus_tag=YpsIP31758_1674 NC_009708.1 Protein Homology CDS 1945180 1946061 . + 0 ID=cds1640;Parent=gene1694;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NC_009708.1 RefSeq gene 1946719 1947261 . + . ID=gene1695;Name=YPSIP31758_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09705;old_locus_tag=YpsIP31758_1675 NC_009708.1 Protein Homology CDS 1946719 1947261 . + 0 ID=cds1641;Parent=gene1695;Dbxref=Genbank:WP_012105009.1;Name=WP_012105009.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_012105009.1;transl_table=11 NC_009708.1 RefSeq gene 1947473 1948159 . + . ID=gene1696;Name=YPSIP31758_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09710;old_locus_tag=YpsIP31758_1676 NC_009708.1 Protein Homology CDS 1947473 1948159 . + 0 ID=cds1642;Parent=gene1696;Dbxref=Genbank:WP_041175759.1;Name=WP_041175759.1;gbkey=CDS;product=fimbrial assembly protein;protein_id=WP_041175759.1;transl_table=11 NC_009708.1 RefSeq gene 1948241 1950853 . + . ID=gene1697;Name=YPSIP31758_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09715;old_locus_tag=YpsIP31758_1677 NC_009708.1 Protein Homology CDS 1948241 1950853 . + 0 ID=cds1643;Parent=gene1697;Dbxref=Genbank:WP_011192555.1;Name=WP_011192555.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192555.1;transl_table=11 NC_009708.1 RefSeq gene 1950850 1952013 . + . ID=gene1698;Name=YPSIP31758_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09720;old_locus_tag=YpsIP31758_1678 NC_009708.1 Protein Homology CDS 1950850 1952013 . + 0 ID=cds1644;Parent=gene1698;Dbxref=Genbank:WP_002215120.1;Name=WP_002215120.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11 NC_009708.1 RefSeq gene 1952010 1952813 . + . ID=gene1699;Name=YPSIP31758_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09725;old_locus_tag=YpsIP31758_1679 NC_009708.1 Protein Homology CDS 1952010 1952813 . + 0 ID=cds1645;Parent=gene1699;Dbxref=Genbank:WP_012105011.1;Name=WP_012105011.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_012105011.1;transl_table=11 NC_009708.1 RefSeq gene 1952867 1954234 . - . ID=gene1700;Name=YPSIP31758_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09730;old_locus_tag=YpsIP31758_1680 NC_009708.1 Protein Homology CDS 1952867 1954234 . - 0 ID=cds1646;Parent=gene1700;Dbxref=Genbank:WP_002210842.1;Name=WP_002210842.1;gbkey=CDS;product=multidrug MFS transporter;protein_id=WP_002210842.1;transl_table=11 NC_009708.1 RefSeq gene 1954601 1955767 . + . ID=gene1701;Name=YPSIP31758_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09735;old_locus_tag=YpsIP31758_1682 NC_009708.1 Protein Homology CDS 1954601 1955767 . + 0 ID=cds1647;Parent=gene1701;Dbxref=Genbank:WP_011192552.1;Name=WP_011192552.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_011192552.1;transl_table=11 NC_009708.1 RefSeq gene 1955954 1956745 . + . ID=gene1702;Name=YPSIP31758_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09740;old_locus_tag=YpsIP31758_1683 NC_009708.1 Protein Homology CDS 1955954 1956745 . + 0 ID=cds1648;Parent=gene1702;Dbxref=Genbank:WP_002210840.1;Name=WP_002210840.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002210840.1;transl_table=11 NC_009708.1 RefSeq gene 1957131 1957982 . + . ID=gene1703;Name=YPSIP31758_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09745;old_locus_tag=YpsIP31758_1684 NC_009708.1 Protein Homology CDS 1957131 1957982 . + 0 ID=cds1649;Parent=gene1703;Dbxref=Genbank:WP_011192551.1;Name=WP_011192551.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011192551.1;transl_table=11 NC_009708.1 RefSeq gene 1958197 1959588 . - . ID=gene1704;Name=YPSIP31758_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09750;old_locus_tag=YpsIP31758_1685 NC_009708.1 Protein Homology CDS 1958197 1959588 . - 0 ID=cds1650;Parent=gene1704;Dbxref=Genbank:WP_012105013.1;Name=WP_012105013.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_012105013.1;transl_table=11 NC_009708.1 RefSeq gene 1959792 1960340 . - . ID=gene1705;Name=YPSIP31758_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09755;old_locus_tag=YpsIP31758_1686 NC_009708.1 Protein Homology CDS 1959792 1960340 . - 0 ID=cds1651;Parent=gene1705;Dbxref=Genbank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210837.1;transl_table=11 NC_009708.1 RefSeq gene 1960838 1961548 . - . ID=gene1706;Name=YPSIP31758_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09760;old_locus_tag=YpsIP31758_1687 NC_009708.1 Protein Homology CDS 1960838 1961548 . - 0 ID=cds1652;Parent=gene1706;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11 NC_009708.1 RefSeq gene 1961846 1963138 . - . ID=gene1707;Name=YPSIP31758_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09765;old_locus_tag=YpsIP31758_1688 NC_009708.1 Protein Homology CDS 1961846 1963138 . - 0 ID=cds1653;Parent=gene1707;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NC_009708.1 RefSeq gene 1963154 1964281 . - . ID=gene1708;Name=YPSIP31758_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09770;old_locus_tag=YpsIP31758_1689 NC_009708.1 Protein Homology CDS 1963154 1964281 . - 0 ID=cds1654;Parent=gene1708;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NC_009708.1 RefSeq gene 1964295 1965215 . - . ID=gene1709;Name=YPSIP31758_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09775;old_locus_tag=YpsIP31758_1690 NC_009708.1 Protein Homology CDS 1964295 1965215 . - 0 ID=cds1655;Parent=gene1709;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NC_009708.1 RefSeq gene 1965208 1966098 . - . ID=gene1710;Name=YPSIP31758_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09780;old_locus_tag=YpsIP31758_1691 NC_009708.1 Protein Homology CDS 1965208 1966098 . - 0 ID=cds1656;Parent=gene1710;Dbxref=Genbank:WP_002210832.1;Name=WP_002210832.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NC_009708.1 RefSeq gene 1966139 1967806 . - . ID=gene1711;Name=YPSIP31758_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09785;old_locus_tag=YpsIP31758_1692 NC_009708.1 Protein Homology CDS 1966139 1967806 . - 0 ID=cds1657;Parent=gene1711;Dbxref=Genbank:WP_012105014.1;Name=WP_012105014.1;gbkey=CDS;product=pectate disaccharide-lyase;protein_id=WP_012105014.1;transl_table=11 NC_009708.1 RefSeq gene 1968151 1968912 . - . ID=gene1712;Name=YPSIP31758_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09790;old_locus_tag=YpsIP31758_1693 NC_009708.1 Protein Homology CDS 1968151 1968912 . - 0 ID=cds1658;Parent=gene1712;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11 NC_009708.1 RefSeq gene 1969004 1969840 . - . ID=gene1713;Name=YPSIP31758_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09795;old_locus_tag=YpsIP31758_1694 NC_009708.1 Protein Homology CDS 1969004 1969840 . - 0 ID=cds1659;Parent=gene1713;Dbxref=Genbank:WP_012105015.1;Name=WP_012105015.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_012105015.1;transl_table=11 NC_009708.1 RefSeq gene 1970176 1970508 . + . ID=gene1714;Name=YPSIP31758_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09800;old_locus_tag=YpsIP31758_1696 NC_009708.1 Protein Homology CDS 1970176 1970508 . + 0 ID=cds1660;Parent=gene1714;Dbxref=Genbank:WP_012105016.1;Name=WP_012105016.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_012105016.1;transl_table=11 NC_009708.1 RefSeq repeat_region 1970628 1970758 . + . ID=id181;gbkey=repeat_region NC_009708.1 RefSeq gene 1970790 1971455 . - . ID=gene1715;Name=YPSIP31758_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09805;old_locus_tag=YpsIP31758_1697 NC_009708.1 Protein Homology CDS 1970790 1971455 . - 0 ID=cds1661;Parent=gene1715;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11 NC_009708.1 RefSeq gene 1971866 1972420 . + . ID=gene1716;Name=YPSIP31758_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09810;old_locus_tag=YpsIP31758_1699 NC_009708.1 Protein Homology CDS 1971866 1972420 . + 0 ID=cds1662;Parent=gene1716;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11 NC_009708.1 RefSeq gene 1972549 1973424 . - . ID=gene1717;Name=YPSIP31758_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09815;old_locus_tag=YpsIP31758_1700 NC_009708.1 Protein Homology CDS 1972549 1973424 . - 0 ID=cds1663;Parent=gene1717;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11 NC_009708.1 RefSeq gene 1973449 1973661 . - . ID=gene1718;Name=YPSIP31758_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09820;old_locus_tag=YpsIP31758_1701 NC_009708.1 Protein Homology CDS 1973449 1973661 . - 0 ID=cds1664;Parent=gene1718;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11 NC_009708.1 RefSeq gene 1973729 1974622 . - . ID=gene1719;Name=YPSIP31758_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09825;old_locus_tag=YpsIP31758_1702 NC_009708.1 Protein Homology CDS 1973729 1974622 . - 0 ID=cds1665;Parent=gene1719;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11 NC_009708.1 RefSeq gene 1974619 1975503 . - . ID=gene1720;Name=YPSIP31758_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09830;old_locus_tag=YpsIP31758_1703 NC_009708.1 Protein Homology CDS 1974619 1975503 . - 0 ID=cds1666;Parent=gene1720;Dbxref=Genbank:WP_011192548.1;Name=WP_011192548.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192548.1;transl_table=11 NC_009708.1 RefSeq gene 1975503 1976393 . - . ID=gene1721;Name=YPSIP31758_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09835;old_locus_tag=YpsIP31758_1704 NC_009708.1 Protein Homology CDS 1975503 1976393 . - 0 ID=cds1667;Parent=gene1721;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11 NC_009708.1 RefSeq gene 1976390 1977358 . - . ID=gene1722;Name=YPSIP31758_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09840;old_locus_tag=YpsIP31758_1705 NC_009708.1 Protein Homology CDS 1976390 1977358 . - 0 ID=cds1668;Parent=gene1722;Dbxref=Genbank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_002211842.1;transl_table=11 NC_009708.1 RefSeq gene 1977570 1978232 . + . ID=gene1723;Name=YPSIP31758_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09845;old_locus_tag=YpsIP31758_1706 NC_009708.1 Protein Homology CDS 1977570 1978232 . + 0 ID=cds1669;Parent=gene1723;Dbxref=Genbank:WP_002216686.1;Name=WP_002216686.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_002216686.1;transl_table=11 NC_009708.1 RefSeq gene 1978354 1979037 . - . ID=gene1724;Name=YPSIP31758_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09850;old_locus_tag=YpsIP31758_1707 NC_009708.1 Protein Homology CDS 1978354 1979037 . - 0 ID=cds1670;Parent=gene1724;Dbxref=Genbank:WP_012105020.1;Name=WP_012105020.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105020.1;transl_table=11 NC_009708.1 RefSeq gene 1979356 1979607 . + . ID=gene1725;Name=YPSIP31758_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09855 NC_009708.1 Protein Homology CDS 1979356 1979607 . + 0 ID=cds1671;Parent=gene1725;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NC_009708.1 RefSeq gene 1979679 1980056 . - . ID=gene1726;Name=YPSIP31758_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09860 NC_009708.1 Protein Homology CDS 1979679 1980056 . - 0 ID=cds1672;Parent=gene1726;Dbxref=Genbank:WP_011192547.1;Name=WP_011192547.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192547.1;transl_table=11 NC_009708.1 RefSeq gene 1980366 1980578 . - . ID=gene1727;Name=YPSIP31758_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09865;old_locus_tag=YpsIP31758_1711 NC_009708.1 Protein Homology CDS 1980366 1980578 . - 0 ID=cds1673;Parent=gene1727;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11 NC_009708.1 RefSeq gene 1980969 1982897 . + . ID=gene1728;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09870;old_locus_tag=YpsIP31758_1712 NC_009708.1 Protein Homology CDS 1980969 1982897 . + 0 ID=cds1674;Parent=gene1728;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NC_009708.1 RefSeq gene 1983102 1983452 . + . ID=gene1729;Name=YPSIP31758_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09875 NC_009708.1 Protein Homology CDS 1983102 1983452 . + 0 ID=cds1675;Parent=gene1729;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11 NC_009708.1 RefSeq gene 1983549 1983746 . + . ID=gene1730;Name=YPSIP31758_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09880;old_locus_tag=YpsIP31758_1714 NC_009708.1 Protein Homology CDS 1983549 1983746 . + 0 ID=cds1676;Parent=gene1730;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NC_009708.1 RefSeq gene 1983784 1984140 . + . ID=gene1731;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09885;old_locus_tag=YpsIP31758_1715 NC_009708.1 Protein Homology CDS 1983784 1984140 . + 0 ID=cds1677;Parent=gene1731;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NC_009708.1 RefSeq gene 1984639 1985622 . + . ID=gene1732;Name=YPSIP31758_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09890;old_locus_tag=YpsIP31758_1716 NC_009708.1 Protein Homology CDS 1984639 1985622 . + 0 ID=cds1678;Parent=gene1732;Dbxref=Genbank:WP_011192546.1;Name=WP_011192546.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_011192546.1;transl_table=11 NC_009708.1 RefSeq gene 1985636 1988023 . + . ID=gene1733;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09895;old_locus_tag=YpsIP31758_1717 NC_009708.1 Protein Homology CDS 1985636 1988023 . + 0 ID=cds1679;Parent=gene1733;Dbxref=Genbank:WP_012105021.1;Name=WP_012105021.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_012105021.1;transl_table=11 NC_009708.1 RefSeq gene 1988028 1988324 . + . ID=gene1734;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09900;old_locus_tag=YpsIP31758_1718 NC_009708.1 Protein Homology CDS 1988028 1988324 . + 0 ID=cds1680;Parent=gene1734;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NC_009708.1 RefSeq gene 1988658 1989116 . + . ID=gene1735;Name=YPSIP31758_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09905;old_locus_tag=YpsIP31758_1719 NC_009708.1 Protein Homology CDS 1988658 1989116 . + 0 ID=cds1681;Parent=gene1735;Dbxref=Genbank:WP_012105022.1;Name=WP_012105022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105022.1;transl_table=11 NC_009708.1 RefSeq gene 1989343 1990350 . + . ID=gene1736;Name=YPSIP31758_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09910;old_locus_tag=YpsIP31758_1720 NC_009708.1 Protein Homology CDS 1989343 1990350 . + 0 ID=cds1682;Parent=gene1736;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11 NC_009708.1 RefSeq gene 1990420 1990974 . + . ID=gene1737;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09915;old_locus_tag=YpsIP31758_1721 NC_009708.1 Protein Homology CDS 1990420 1990974 . + 0 ID=cds1683;Parent=gene1737;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NC_009708.1 RefSeq gene 1990999 1991757 . + . ID=gene1738;Name=YPSIP31758_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09920;old_locus_tag=YpsIP31758_1722 NC_009708.1 Protein Homology CDS 1990999 1991757 . + 0 ID=cds1684;Parent=gene1738;Dbxref=Genbank:WP_002211826.1;Name=WP_002211826.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_002211826.1;transl_table=11 NC_009708.1 RefSeq gene 1992107 1993261 . + . ID=gene1739;Name=YPSIP31758_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09925;old_locus_tag=YpsIP31758_1723 NC_009708.1 Protein Homology CDS 1992107 1993261 . + 0 ID=cds1685;Parent=gene1739;Dbxref=Genbank:WP_002211825.1;Name=WP_002211825.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_002211825.1;transl_table=11 NC_009708.1 RefSeq gene 1993248 1994078 . + . ID=gene1740;Name=YPSIP31758_RS09930;end_range=1994078,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS09930;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 1993248 1994078 . + 0 ID=cds1686;Parent=gene1740;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;end_range=1994078,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 1994076 1994792 . + . ID=id182;gbkey=repeat_region NC_009708.1 RefSeq gene 1994224 1994682 . + . ID=gene1741;Name=YPSIP31758_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09935;old_locus_tag=YpsIP31758_1725 NC_009708.1 Protein Homology CDS 1994224 1994682 . + 0 ID=cds1687;Parent=gene1741;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 1994939 1996942 . + . ID=gene1742;Name=YPSIP31758_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09940;old_locus_tag=YpsIP31758_1727 NC_009708.1 Protein Homology CDS 1994939 1996942 . + 0 ID=cds1688;Parent=gene1742;Dbxref=Genbank:WP_011192542.1;Name=WP_011192542.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_011192542.1;transl_table=11 NC_009708.1 RefSeq gene 1996939 1997844 . + . ID=gene1743;Name=YPSIP31758_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09945;old_locus_tag=YpsIP31758_1728 NC_009708.1 Protein Homology CDS 1996939 1997844 . + 0 ID=cds1689;Parent=gene1743;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11 NC_009708.1 RefSeq gene 1997841 1999505 . + . ID=gene1744;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09950;old_locus_tag=YpsIP31758_1729 NC_009708.1 Protein Homology CDS 1997841 1999505 . + 0 ID=cds1690;Parent=gene1744;Dbxref=Genbank:WP_002211821.1;Name=WP_002211821.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_002211821.1;transl_table=11 NC_009708.1 RefSeq gene 1999502 1999846 . + . ID=gene1745;Name=YPSIP31758_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09955;old_locus_tag=YpsIP31758_1730 NC_009708.1 Protein Homology CDS 1999502 1999846 . + 0 ID=cds1691;Parent=gene1745;Dbxref=Genbank:WP_011192541.1;Name=WP_011192541.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_011192541.1;transl_table=11 NC_009708.1 RefSeq gene 1999843 2000229 . + . ID=gene1746;Name=YPSIP31758_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09960;old_locus_tag=YpsIP31758_1731 NC_009708.1 Protein Homology CDS 1999843 2000229 . + 0 ID=cds1692;Parent=gene1746;Dbxref=Genbank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11 NC_009708.1 RefSeq gene 2000509 2000973 . + . ID=gene1747;Name=YPSIP31758_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09965;old_locus_tag=YpsIP31758_1732 NC_009708.1 Protein Homology CDS 2000509 2000973 . + 0 ID=cds1693;Parent=gene1747;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11 NC_009708.1 RefSeq gene 2001098 2002114 . + . ID=gene1748;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09970;old_locus_tag=YpsIP31758_1733 NC_009708.1 Protein Homology CDS 2001098 2002114 . + 0 ID=cds1694;Parent=gene1748;Dbxref=Genbank:WP_002211816.1;Name=WP_002211816.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_002211816.1;transl_table=11 NC_009708.1 RefSeq gene 2002166 2003629 . + . ID=gene1749;Name=YPSIP31758_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09975;old_locus_tag=YpsIP31758_1734 NC_009708.1 Protein Homology CDS 2002166 2003629 . + 0 ID=cds1695;Parent=gene1749;Dbxref=Genbank:WP_011192539.1;Name=WP_011192539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192539.1;transl_table=11 NC_009708.1 RefSeq gene 2003798 2004844 . - . ID=gene1750;Name=YPSIP31758_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09980;old_locus_tag=YpsIP31758_1735 NC_009708.1 Protein Homology CDS 2003798 2004844 . - 0 ID=cds1696;Parent=gene1750;Dbxref=Genbank:WP_011192538.1;Name=WP_011192538.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_011192538.1;transl_table=11 NC_009708.1 RefSeq gene 2005001 2005822 . - . ID=gene1751;Name=YPSIP31758_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09985;old_locus_tag=YpsIP31758_1736 NC_009708.1 Protein Homology CDS 2005001 2005822 . - 0 ID=cds1697;Parent=gene1751;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11 NC_009708.1 RefSeq gene 2006178 2008562 . + . ID=gene1752;Name=YPSIP31758_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09990;old_locus_tag=YpsIP31758_1737 NC_009708.1 Protein Homology CDS 2006178 2008562 . + 0 ID=cds1698;Parent=gene1752;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NC_009708.1 RefSeq gene 2008789 2008897 . - . ID=gene1753;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22450 NC_009708.1 RefSeq transcript 2008789 2008897 . - . ID=rna52;Parent=gene1753;gbkey=misc_RNA;gene=rprA;product=rprA RNA NC_009708.1 RefSeq exon 2008789 2008897 . - . ID=id183;Parent=rna52;gbkey=misc_RNA;gene=rprA;product=rprA RNA NC_009708.1 RefSeq gene 2009162 2010265 . - . ID=gene1754;Name=YPSIP31758_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS09995;old_locus_tag=YpsIP31758_1738 NC_009708.1 Protein Homology CDS 2009162 2010265 . - 0 ID=cds1699;Parent=gene1754;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11 NC_009708.1 RefSeq gene 2010903 2013959 . + . ID=gene1755;Name=YPSIP31758_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10000;old_locus_tag=YpsIP31758_1739 NC_009708.1 Protein Homology CDS 2010903 2013959 . + 0 ID=cds1700;Parent=gene1755;Dbxref=Genbank:WP_012105024.1;Name=WP_012105024.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105024.1;transl_table=11 NC_009708.1 RefSeq gene 2014113 2014529 . + . ID=gene1756;Name=YPSIP31758_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10005;old_locus_tag=YpsIP31758_1740 NC_009708.1 Protein Homology CDS 2014113 2014529 . + 0 ID=cds1701;Parent=gene1756;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11 NC_009708.1 RefSeq gene 2014809 2014967 . + . ID=gene1757;Name=YPSIP31758_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10010 NC_009708.1 Protein Homology CDS 2014809 2014967 . + 0 ID=cds1702;Parent=gene1757;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11 NC_009708.1 RefSeq gene 2015145 2015516 . + . ID=gene1758;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10015;old_locus_tag=YpsIP31758_1741 NC_009708.1 Protein Homology CDS 2015145 2015516 . + 0 ID=cds1703;Parent=gene1758;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11 NC_009708.1 RefSeq gene 2015531 2017042 . + . ID=gene1759;Name=YPSIP31758_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10020;old_locus_tag=YpsIP31758_1742 NC_009708.1 Protein Homology CDS 2015531 2017042 . + 0 ID=cds1704;Parent=gene1759;Dbxref=Genbank:WP_012105025.1;Name=WP_012105025.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=cysteine desulfurase activator complex subunit SufB;protein_id=WP_012105025.1;transl_table=11 NC_009708.1 RefSeq gene 2017227 2017973 . + . ID=gene1760;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10025;old_locus_tag=YpsIP31758_1743 NC_009708.1 Protein Homology CDS 2017227 2017973 . + 0 ID=cds1705;Parent=gene1760;Dbxref=Genbank:WP_012105026.1;Name=WP_012105026.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_012105026.1;transl_table=11 NC_009708.1 RefSeq gene 2017948 2019273 . + . ID=gene1761;Name=YPSIP31758_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10030;old_locus_tag=YpsIP31758_1744 NC_009708.1 Protein Homology CDS 2017948 2019273 . + 0 ID=cds1706;Parent=gene1761;Dbxref=Genbank:WP_012105027.1;Name=WP_012105027.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_012105027.1;transl_table=11 NC_009708.1 RefSeq gene 2019270 2020490 . + . ID=gene1762;Name=YPSIP31758_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10035;old_locus_tag=YpsIP31758_1745 NC_009708.1 Protein Homology CDS 2019270 2020490 . + 0 ID=cds1707;Parent=gene1762;Dbxref=Genbank:WP_012105028.1;Name=WP_012105028.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_012105028.1;transl_table=11 NC_009708.1 RefSeq gene 2020579 2021001 . + . ID=gene1763;Name=YPSIP31758_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10040;old_locus_tag=YpsIP31758_1746 NC_009708.1 Protein Homology CDS 2020579 2021001 . + 0 ID=cds1708;Parent=gene1763;Dbxref=Genbank:WP_012105029.1;Name=WP_012105029.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_012105029.1;transl_table=11 NC_009708.1 RefSeq gene 2021272 2022336 . + . ID=gene1764;Name=YPSIP31758_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10045;old_locus_tag=YpsIP31758_1747 NC_009708.1 Protein Homology CDS 2021272 2022336 . + 0 ID=cds1709;Parent=gene1764;Dbxref=Genbank:WP_002223648.1;Name=WP_002223648.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002223648.1;transl_table=11 NC_009708.1 RefSeq gene 2022697 2022933 . - . ID=gene1765;Name=YPSIP31758_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10050;old_locus_tag=YpsIP31758_1748 NC_009708.1 Protein Homology CDS 2022697 2022933 . - 0 ID=cds1710;Parent=gene1765;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11 NC_009708.1 RefSeq gene 2023254 2024666 . - . ID=gene1766;Name=YPSIP31758_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10055;old_locus_tag=YpsIP31758_1749 NC_009708.1 Protein Homology CDS 2023254 2024666 . - 0 ID=cds1711;Parent=gene1766;Dbxref=Genbank:WP_002210936.1;Name=WP_002210936.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002210936.1;transl_table=11 NC_009708.1 RefSeq gene 2025241 2025317 . - . ID=gene1767;Name=YPSIP31758_RS10060;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS10060;old_locus_tag=YpsIP31758_4228 NC_009708.1 tRNAscan-SE tRNA 2025241 2025317 . - . ID=rna53;Parent=gene1767;anticodon=(pos:complement(2025281..2025283));gbkey=tRNA;product=tRNA-Val NC_009708.1 tRNAscan-SE exon 2025241 2025317 . - . ID=id184;Parent=rna53;anticodon=(pos:complement(2025281..2025283));gbkey=tRNA;product=tRNA-Val NC_009708.1 RefSeq gene 2025468 2025544 . - . ID=gene1768;Name=YPSIP31758_RS10065;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS10065;old_locus_tag=YpsIP31758_4229 NC_009708.1 tRNAscan-SE tRNA 2025468 2025544 . - . ID=rna54;Parent=gene1768;anticodon=(pos:complement(2025508..2025510));gbkey=tRNA;product=tRNA-Val NC_009708.1 tRNAscan-SE exon 2025468 2025544 . - . ID=id185;Parent=rna54;anticodon=(pos:complement(2025508..2025510));gbkey=tRNA;product=tRNA-Val NC_009708.1 RefSeq gene 2025604 2025680 . - . ID=gene1769;Name=YPSIP31758_RS10070;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS10070;old_locus_tag=YpsIP31758_4230 NC_009708.1 tRNAscan-SE tRNA 2025604 2025680 . - . ID=rna55;Parent=gene1769;anticodon=(pos:complement(2025644..2025646));gbkey=tRNA;product=tRNA-Val NC_009708.1 tRNAscan-SE exon 2025604 2025680 . - . ID=id186;Parent=rna55;anticodon=(pos:complement(2025644..2025646));gbkey=tRNA;product=tRNA-Val NC_009708.1 RefSeq gene 2025923 2027296 . - . ID=gene1770;Name=YPSIP31758_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10075;old_locus_tag=YpsIP31758_1750 NC_009708.1 Protein Homology CDS 2025923 2027296 . - 0 ID=cds1712;Parent=gene1770;Dbxref=Genbank:WP_012105030.1;Name=WP_012105030.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_012105030.1;transl_table=11 NC_009708.1 RefSeq gene 2027545 2028201 . + . ID=gene1771;Name=YPSIP31758_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10080;old_locus_tag=YpsIP31758_1751 NC_009708.1 Protein Homology CDS 2027545 2028201 . + 0 ID=cds1713;Parent=gene1771;Dbxref=Genbank:WP_012105032.1;Name=WP_012105032.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_012105032.1;transl_table=11 NC_009708.1 RefSeq gene 2028252 2029403 . - . ID=gene1772;Name=YPSIP31758_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10085;old_locus_tag=YpsIP31758_1752 NC_009708.1 Protein Homology CDS 2028252 2029403 . - 0 ID=cds1714;Parent=gene1772;Dbxref=Genbank:WP_002210940.1;Name=WP_002210940.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11 NC_009708.1 RefSeq gene 2029883 2031085 . - . ID=gene1773;Name=YPSIP31758_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10090;old_locus_tag=YpsIP31758_1753 NC_009708.1 Protein Homology CDS 2029883 2031085 . - 0 ID=cds1715;Parent=gene1773;Dbxref=Genbank:WP_002210941.1;Name=WP_002210941.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002210941.1;transl_table=11 NC_009708.1 RefSeq gene 2031376 2032308 . + . ID=gene1774;Name=YPSIP31758_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10095;old_locus_tag=YpsIP31758_1754 NC_009708.1 Protein Homology CDS 2031376 2032308 . + 0 ID=cds1716;Parent=gene1774;Dbxref=Genbank:WP_012105034.1;Name=WP_012105034.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012105034.1;transl_table=11 NC_009708.1 RefSeq gene 2032411 2033436 . - . ID=gene1775;Name=YPSIP31758_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10100;old_locus_tag=YpsIP31758_1755 NC_009708.1 Protein Homology CDS 2032411 2033436 . - 0 ID=cds1717;Parent=gene1775;Dbxref=Genbank:WP_002210943.1;Name=WP_002210943.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_002210943.1;transl_table=11 NC_009708.1 RefSeq gene 2033963 2034541 . - . ID=gene1776;Name=YPSIP31758_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10105;old_locus_tag=YpsIP31758_1756 NC_009708.1 Protein Homology CDS 2033963 2034541 . - 0 ID=cds1718;Parent=gene1776;Dbxref=Genbank:WP_011192530.1;Name=WP_011192530.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_011192530.1;transl_table=11 NC_009708.1 RefSeq gene 2034902 2035753 . - . ID=gene1777;Name=YPSIP31758_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10110;old_locus_tag=YpsIP31758_1757 NC_009708.1 Protein Homology CDS 2034902 2035753 . - 0 ID=cds1719;Parent=gene1777;Dbxref=Genbank:WP_012105035.1;Name=WP_012105035.1;gbkey=CDS;product=hydrolase;protein_id=WP_012105035.1;transl_table=11 NC_009708.1 RefSeq gene 2035872 2036093 . + . ID=gene1778;Name=YPSIP31758_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10115 NC_009708.1 Protein Homology CDS 2035872 2036093 . + 0 ID=cds1720;Parent=gene1778;Dbxref=Genbank:WP_012304028.1;Name=WP_012304028.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304028.1;transl_table=11 NC_009708.1 RefSeq gene 2036193 2036543 . + . ID=gene1779;Name=YPSIP31758_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10120;old_locus_tag=YpsIP31758_1758 NC_009708.1 Protein Homology CDS 2036193 2036543 . + 0 ID=cds1721;Parent=gene1779;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NC_009708.1 RefSeq gene 2036636 2036839 . + . ID=gene1780;Name=YPSIP31758_RS10125;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS10125 NC_009708.1 RefSeq repeat_region 2036643 2036815 . + . ID=id187;gbkey=repeat_region NC_009708.1 RefSeq gene 2036854 2037534 . - . ID=gene1781;Name=YPSIP31758_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10130;old_locus_tag=YpsIP31758_1759 NC_009708.1 Protein Homology CDS 2036854 2037534 . - 0 ID=cds1722;Parent=gene1781;Dbxref=Genbank:WP_011906187.1;Name=WP_011906187.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_011906187.1;transl_table=11 NC_009708.1 RefSeq gene 2037613 2038020 . - . ID=gene1782;Name=YPSIP31758_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10135;old_locus_tag=YpsIP31758_1760 NC_009708.1 Protein Homology CDS 2037613 2038020 . - 0 ID=cds1723;Parent=gene1782;Dbxref=Genbank:WP_011192527.1;Name=WP_011192527.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=glyoxalase I;protein_id=WP_011192527.1;transl_table=11 NC_009708.1 RefSeq gene 2038459 2038692 . - . ID=gene1783;Name=YPSIP31758_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10140;old_locus_tag=YpsIP31758_1761 NC_009708.1 Protein Homology CDS 2038459 2038692 . - 0 ID=cds1724;Parent=gene1783;Dbxref=Genbank:WP_025384021.1;Name=WP_025384021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025384021.1;transl_table=11 NC_009708.1 RefSeq gene 2038865 2039962 . - . ID=gene1784;Name=YPSIP31758_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10145;old_locus_tag=YpsIP31758_1762 NC_009708.1 Protein Homology CDS 2038865 2039962 . - 0 ID=cds1725;Parent=gene1784;Dbxref=Genbank:WP_002210950.1;Name=WP_002210950.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_002210950.1;transl_table=11 NC_009708.1 RefSeq gene 2040050 2040649 . - . ID=gene1785;Name=YPSIP31758_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10150;old_locus_tag=YpsIP31758_1763 NC_009708.1 Protein Homology CDS 2040050 2040649 . - 0 ID=cds1726;Parent=gene1785;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NC_009708.1 RefSeq gene 2040892 2042529 . - . ID=gene1786;Name=YPSIP31758_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10155;old_locus_tag=YpsIP31758_1764 NC_009708.1 Protein Homology CDS 2040892 2042529 . - 0 ID=cds1727;Parent=gene1786;Dbxref=Genbank:WP_012105038.1;Name=WP_012105038.1;gbkey=CDS;product=metal dependent hydrolase;protein_id=WP_012105038.1;transl_table=11 NC_009708.1 RefSeq gene 2042703 2042942 . + . ID=gene1787;Name=YPSIP31758_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10160 NC_009708.1 Protein Homology CDS 2042703 2042942 . + 0 ID=cds1728;Parent=gene1787;Dbxref=Genbank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210953.1;transl_table=11 NC_009708.1 RefSeq gene 2043074 2043970 . + . ID=gene1788;Name=YPSIP31758_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10165;old_locus_tag=YpsIP31758_1766 NC_009708.1 Protein Homology CDS 2043074 2043970 . + 0 ID=cds1729;Parent=gene1788;Dbxref=Genbank:WP_012105039.1;Name=WP_012105039.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_012105039.1;transl_table=11 NC_009708.1 RefSeq gene 2044768 2045199 . + . ID=gene1789;Name=YPSIP31758_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10170;old_locus_tag=YpsIP31758_1767 NC_009708.1 Protein Homology CDS 2044768 2045199 . + 0 ID=cds1730;Parent=gene1789;Dbxref=Genbank:WP_002210955.1;Name=WP_002210955.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_002210955.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2045256 2045975 . + . ID=id188;gbkey=repeat_region NC_009708.1 RefSeq gene 2045367 2045825 . - . ID=gene1790;Name=YPSIP31758_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10175;old_locus_tag=YpsIP31758_1768 NC_009708.1 Protein Homology CDS 2045367 2045825 . - 0 ID=cds1731;Parent=gene1790;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_009708.1 RefSeq gene 2046053 2046520 . - . ID=gene1791;Name=YPSIP31758_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10180;old_locus_tag=YpsIP31758_1769 NC_009708.1 Protein Homology CDS 2046053 2046520 . - 0 ID=cds1732;Parent=gene1791;Dbxref=Genbank:WP_012105040.1;Name=WP_012105040.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105040.1;transl_table=11 NC_009708.1 RefSeq gene 2047076 2048188 . + . ID=gene1792;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=YPSIP31758_RS10185;old_locus_tag=YpsIP31758_1770 NC_009708.1 Protein Homology CDS 2047076 2048188 . + 0 ID=cds1733;Parent=gene1792;Dbxref=Genbank:WP_002218322.1;Name=WP_002218322.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NC_009708.1 RefSeq gene 2048246 2048560 . + . ID=gene1793;Name=YPSIP31758_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10190;old_locus_tag=YpsIP31758_1771 NC_009708.1 Protein Homology CDS 2048246 2048560 . + 0 ID=cds1734;Parent=gene1793;Dbxref=Genbank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002218323.1;transl_table=11 NC_009708.1 RefSeq gene 2048651 2049304 . + . ID=gene1794;Name=YPSIP31758_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10195;old_locus_tag=YpsIP31758_1772 NC_009708.1 Protein Homology CDS 2048651 2049304 . + 0 ID=cds1735;Parent=gene1794;Dbxref=Genbank:WP_012105041.1;Name=WP_012105041.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_012105041.1;transl_table=11 NC_009708.1 RefSeq gene 2049486 2050760 . + . ID=gene1795;Name=YPSIP31758_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10200;old_locus_tag=YpsIP31758_1773 NC_009708.1 Protein Homology CDS 2049486 2050760 . + 0 ID=cds1736;Parent=gene1795;Dbxref=Genbank:WP_011192524.1;Name=WP_011192524.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_011192524.1;transl_table=11 NC_009708.1 RefSeq gene 2050915 2051775 . + . ID=gene1796;Name=YPSIP31758_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10205;old_locus_tag=YpsIP31758_1774 NC_009708.1 Protein Homology CDS 2050915 2051775 . + 0 ID=cds1737;Parent=gene1796;Dbxref=Genbank:WP_002210961.1;Name=WP_002210961.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_002210961.1;transl_table=11 NC_009708.1 RefSeq gene 2051835 2052440 . - . ID=gene1797;Name=YPSIP31758_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10210;old_locus_tag=YpsIP31758_1775 NC_009708.1 Protein Homology CDS 2051835 2052440 . - 0 ID=cds1738;Parent=gene1797;Dbxref=Genbank:WP_002210962.1;Name=WP_002210962.1;gbkey=CDS;product=glutathionine S-transferase;protein_id=WP_002210962.1;transl_table=11 NC_009708.1 RefSeq gene 2052685 2052948 . - . ID=gene1798;Name=YPSIP31758_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10215;old_locus_tag=YpsIP31758_1776 NC_009708.1 Protein Homology CDS 2052685 2052948 . - 0 ID=cds1739;Parent=gene1798;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11 NC_009708.1 RefSeq gene 2053194 2053784 . - . ID=gene1799;Name=YPSIP31758_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10220;old_locus_tag=YpsIP31758_1777 NC_009708.1 Protein Homology CDS 2053194 2053784 . - 0 ID=cds1740;Parent=gene1799;Dbxref=Genbank:WP_002210965.1;Name=WP_002210965.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210965.1;transl_table=11 NC_009708.1 RefSeq gene 2054040 2055545 . - . ID=gene1800;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=YPSIP31758_RS10225;old_locus_tag=YpsIP31758_1778 NC_009708.1 Protein Homology CDS 2054040 2055545 . - 0 ID=cds1741;Parent=gene1800;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11 NC_009708.1 RefSeq gene 2056191 2057471 . - . ID=gene1801;Name=YPSIP31758_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10230;old_locus_tag=YpsIP31758_1779 NC_009708.1 Protein Homology CDS 2056191 2057471 . - 0 ID=cds1742;Parent=gene1801;Dbxref=Genbank:WP_012105042.1;Name=WP_012105042.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105042.1;transl_table=11 NC_009708.1 RefSeq gene 2057861 2058676 . - . ID=gene1802;Name=YPSIP31758_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10235;old_locus_tag=YpsIP31758_1780 NC_009708.1 Protein Homology CDS 2057861 2058676 . - 0 ID=cds1743;Parent=gene1802;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11 NC_009708.1 RefSeq gene 2058676 2059668 . - . ID=gene1803;Name=YPSIP31758_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10240;old_locus_tag=YpsIP31758_1781 NC_009708.1 Protein Homology CDS 2058676 2059668 . - 0 ID=cds1744;Parent=gene1803;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11 NC_009708.1 RefSeq gene 2059668 2060558 . - . ID=gene1804;Name=YPSIP31758_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10245;old_locus_tag=YpsIP31758_1782 NC_009708.1 Protein Homology CDS 2059668 2060558 . - 0 ID=cds1745;Parent=gene1804;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11 NC_009708.1 RefSeq gene 2060545 2061510 . - . ID=gene1805;Name=YPSIP31758_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10250;old_locus_tag=YpsIP31758_1783 NC_009708.1 Protein Homology CDS 2060545 2061510 . - 0 ID=cds1746;Parent=gene1805;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11 NC_009708.1 RefSeq gene 2061507 2063150 . - . ID=gene1806;Name=YPSIP31758_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10255;old_locus_tag=YpsIP31758_1784 NC_009708.1 Protein Homology CDS 2061507 2063150 . - 0 ID=cds1747;Parent=gene1806;Dbxref=Genbank:WP_011192522.1;Name=WP_011192522.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein sapA;protein_id=WP_011192522.1;transl_table=11 NC_009708.1 RefSeq gene 2063286 2063473 . - . ID=gene1807;Name=YPSIP31758_RS10260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS10260;pseudo=true NC_009708.1 Protein Homology CDS 2063286 2063473 . - 0 ID=cds1748;Parent=gene1807;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2063571 2063671 . + . ID=gene1808;Name=YPSIP31758_RS22455;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22455 NC_009708.1 RefSeq transcript 2063571 2063671 . + . ID=rna56;Parent=gene1808;gbkey=misc_RNA;product=RyhB RNA NC_009708.1 RefSeq exon 2063571 2063671 . + . ID=id189;Parent=rna56;gbkey=misc_RNA;product=RyhB RNA NC_009708.1 RefSeq gene 2063730 2064758 . - . ID=gene1809;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10265;old_locus_tag=YpsIP31758_1785 NC_009708.1 Protein Homology CDS 2063730 2064758 . - 0 ID=cds1749;Parent=gene1809;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11 NC_009708.1 RefSeq gene 2065003 2065668 . + . ID=gene1810;Name=YPSIP31758_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10270;old_locus_tag=YpsIP31758_1786 NC_009708.1 Protein Homology CDS 2065003 2065668 . + 0 ID=cds1750;Parent=gene1810;Dbxref=Genbank:WP_002210975.1;Name=WP_002210975.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_002210975.1;transl_table=11 NC_009708.1 RefSeq gene 2065830 2066057 . + . ID=gene1811;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10275;old_locus_tag=YpsIP31758_1787 NC_009708.1 Protein Homology CDS 2065830 2066057 . + 0 ID=cds1751;Parent=gene1811;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11 NC_009708.1 RefSeq gene 2066057 2066416 . + . ID=gene1812;Name=YPSIP31758_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10280;old_locus_tag=YpsIP31758_1788 NC_009708.1 Protein Homology CDS 2066057 2066416 . + 0 ID=cds1752;Parent=gene1812;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11 NC_009708.1 RefSeq gene 2066504 2066743 . + . ID=gene1813;Name=YPSIP31758_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10285;old_locus_tag=YpsIP31758_1789 NC_009708.1 Protein Homology CDS 2066504 2066743 . + 0 ID=cds1753;Parent=gene1813;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11 NC_009708.1 RefSeq gene 2066724 2068121 . + . ID=gene1814;Name=YPSIP31758_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10290;old_locus_tag=YpsIP31758_1790 NC_009708.1 Protein Homology CDS 2066724 2068121 . + 0 ID=cds1754;Parent=gene1814;Dbxref=Genbank:WP_012105043.1;Name=WP_012105043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105043.1;transl_table=11 NC_009708.1 RefSeq gene 2068118 2069179 . + . ID=gene1815;Name=YPSIP31758_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10295;old_locus_tag=YpsIP31758_1791 NC_009708.1 Protein Homology CDS 2068118 2069179 . + 0 ID=cds1755;Parent=gene1815;Dbxref=Genbank:WP_012105044.1;Name=WP_012105044.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105044.1;transl_table=11 NC_009708.1 RefSeq gene 2069189 2069647 . - . ID=gene1816;Name=YPSIP31758_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10300;old_locus_tag=YpsIP31758_1792 NC_009708.1 Protein Homology CDS 2069189 2069647 . - 0 ID=cds1756;Parent=gene1816;Dbxref=Genbank:WP_002210981.1;Name=WP_002210981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210981.1;transl_table=11 NC_009708.1 RefSeq gene 2069709 2070155 . - . ID=gene1817;Name=YPSIP31758_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10305;old_locus_tag=YpsIP31758_1793 NC_009708.1 Protein Homology CDS 2069709 2070155 . - 0 ID=cds1757;Parent=gene1817;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11 NC_009708.1 RefSeq gene 2070492 2072069 . + . ID=gene1818;Name=YPSIP31758_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10310;old_locus_tag=YpsIP31758_1794 NC_009708.1 Protein Homology CDS 2070492 2072069 . + 0 ID=cds1758;Parent=gene1818;Dbxref=Genbank:WP_011192519.1;Name=WP_011192519.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192519.1;transl_table=11 NC_009708.1 RefSeq gene 2072230 2072733 . - . ID=gene1819;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10315;old_locus_tag=YpsIP31758_1795 NC_009708.1 Protein Homology CDS 2072230 2072733 . - 0 ID=cds1759;Parent=gene1819;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NC_009708.1 RefSeq gene 2072896 2073870 . + . ID=gene1820;Name=YPSIP31758_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10320;old_locus_tag=YpsIP31758_1796 NC_009708.1 Protein Homology CDS 2072896 2073870 . + 0 ID=cds1760;Parent=gene1820;Dbxref=Genbank:WP_012105045.1;Name=WP_012105045.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=L-Ala-D/L-Glu epimerase;protein_id=WP_012105045.1;transl_table=11 NC_009708.1 RefSeq gene 2073912 2074619 . - . ID=gene1821;Name=YPSIP31758_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10325;old_locus_tag=YpsIP31758_1797 NC_009708.1 Protein Homology CDS 2073912 2074619 . - 0 ID=cds1761;Parent=gene1821;Dbxref=Genbank:WP_002220315.1;Name=WP_002220315.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_002220315.1;transl_table=11 NC_009708.1 RefSeq gene 2075059 2076675 . + . ID=gene1822;Name=YPSIP31758_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10330;old_locus_tag=YpsIP31758_1798 NC_009708.1 Protein Homology CDS 2075059 2076675 . + 0 ID=cds1762;Parent=gene1822;Dbxref=Genbank:WP_012105046.1;Name=WP_012105046.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_012105046.1;transl_table=11 NC_009708.1 RefSeq gene 2076918 2077901 . + . ID=gene1823;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10335;old_locus_tag=YpsIP31758_1799 NC_009708.1 Protein Homology CDS 2076918 2077901 . + 0 ID=cds1763;Parent=gene1823;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NC_009708.1 RefSeq gene 2078016 2078225 . + . ID=gene1824;Name=YPSIP31758_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10340 NC_009708.1 Protein Homology CDS 2078016 2078225 . + 0 ID=cds1764;Parent=gene1824;Dbxref=Genbank:WP_002223628.1;Name=WP_002223628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223628.1;transl_table=11 NC_009708.1 RefSeq gene 2078275 2079114 . - . ID=gene1825;Name=YPSIP31758_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10345;old_locus_tag=YpsIP31758_1800 NC_009708.1 Protein Homology CDS 2078275 2079114 . - 0 ID=cds1765;Parent=gene1825;Dbxref=Genbank:WP_012105047.1;Name=WP_012105047.1;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=WP_012105047.1;transl_table=11 NC_009708.1 RefSeq gene 2079426 2080430 . - . ID=gene1826;Name=YPSIP31758_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10350;old_locus_tag=YpsIP31758_1801 NC_009708.1 Protein Homology CDS 2079426 2080430 . - 0 ID=cds1766;Parent=gene1826;Dbxref=Genbank:WP_012105048.1;Name=WP_012105048.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_012105048.1;transl_table=11 NC_009708.1 RefSeq gene 2080701 2081642 . - . ID=gene1827;Name=YPSIP31758_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10355;old_locus_tag=YpsIP31758_1802 NC_009708.1 Protein Homology CDS 2080701 2081642 . - 0 ID=cds1767;Parent=gene1827;Dbxref=Genbank:WP_002210992.1;Name=WP_002210992.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_002210992.1;transl_table=11 NC_009708.1 RefSeq gene 2081927 2085460 . - . ID=gene1828;Name=YPSIP31758_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10360;old_locus_tag=YpsIP31758_1803 NC_009708.1 Protein Homology CDS 2081927 2085460 . - 0 ID=cds1768;Parent=gene1828;Dbxref=Genbank:WP_011192515.1;Name=WP_011192515.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_011192515.1;transl_table=11 NC_009708.1 RefSeq gene 2085939 2086271 . + . ID=gene1829;Name=YPSIP31758_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10365;old_locus_tag=YpsIP31758_1804 NC_009708.1 Protein Homology CDS 2085939 2086271 . + 0 ID=cds1769;Parent=gene1829;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11 NC_009708.1 RefSeq gene 2086331 2086990 . - . ID=gene1830;Name=YPSIP31758_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10370;old_locus_tag=YpsIP31758_1805 NC_009708.1 Protein Homology CDS 2086331 2086990 . - 0 ID=cds1770;Parent=gene1830;Dbxref=Genbank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002210995.1;transl_table=11 NC_009708.1 RefSeq gene 2087323 2087634 . + . ID=gene1831;Name=YPSIP31758_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10375 NC_009708.1 Protein Homology CDS 2087323 2087634 . + 0 ID=cds1771;Parent=gene1831;Dbxref=Genbank:WP_002210996.1;Name=WP_002210996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210996.1;transl_table=11 NC_009708.1 RefSeq gene 2087692 2088144 . - . ID=gene1832;Name=YPSIP31758_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10380;old_locus_tag=YpsIP31758_1807 NC_009708.1 Protein Homology CDS 2087692 2088144 . - 0 ID=cds1772;Parent=gene1832;Dbxref=Genbank:WP_012105050.1;Name=WP_012105050.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_012105050.1;transl_table=11 NC_009708.1 RefSeq gene 2088214 2089206 . - . ID=gene1833;Name=YPSIP31758_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10385;old_locus_tag=YpsIP31758_1808 NC_009708.1 Protein Homology CDS 2088214 2089206 . - 0 ID=cds1773;Parent=gene1833;Dbxref=Genbank:WP_012105052.1;Name=WP_012105052.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_012105052.1;transl_table=11 NC_009708.1 RefSeq gene 2089472 2092204 . + . ID=gene1834;Name=YPSIP31758_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10390;old_locus_tag=YpsIP31758_1809 NC_009708.1 Protein Homology CDS 2089472 2092204 . + 0 ID=cds1774;Parent=gene1834;Dbxref=Genbank:WP_012105053.1;Name=WP_012105053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105053.1;transl_table=11 NC_009708.1 RefSeq gene 2092201 2092395 . + . ID=gene1835;Name=YPSIP31758_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10395;old_locus_tag=YpsIP31758_1810 NC_009708.1 Protein Homology CDS 2092201 2092395 . + 0 ID=cds1775;Parent=gene1835;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11 NC_009708.1 RefSeq gene 2092405 2092776 . + . ID=gene1836;Name=YPSIP31758_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10400;old_locus_tag=YpsIP31758_1811 NC_009708.1 Protein Homology CDS 2092405 2092776 . + 0 ID=cds1776;Parent=gene1836;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11 NC_009708.1 RefSeq gene 2093031 2094422 . - . ID=gene1837;Name=YPSIP31758_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10405;old_locus_tag=YpsIP31758_1812 NC_009708.1 Protein Homology CDS 2093031 2094422 . - 0 ID=cds1777;Parent=gene1837;Dbxref=Genbank:WP_012105054.1;Name=WP_012105054.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_012105054.1;transl_table=11 NC_009708.1 RefSeq gene 2094632 2095588 . + . ID=gene1838;Name=YPSIP31758_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10410;old_locus_tag=YpsIP31758_1813 NC_009708.1 Protein Homology CDS 2094632 2095588 . + 0 ID=cds1778;Parent=gene1838;Dbxref=Genbank:WP_002211003.1;Name=WP_002211003.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211003.1;transl_table=11 NC_009708.1 RefSeq gene 2095709 2096314 . - . ID=gene1839;Name=YPSIP31758_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10415;old_locus_tag=YpsIP31758_1814 NC_009708.1 Protein Homology CDS 2095709 2096314 . - 0 ID=cds1779;Parent=gene1839;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NC_009708.1 RefSeq gene 2096782 2100624 . + . ID=gene1840;Name=YPSIP31758_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10420;old_locus_tag=YpsIP31758_1815 NC_009708.1 Protein Homology CDS 2096782 2100624 . + 0 ID=cds1780;Parent=gene1840;Dbxref=Genbank:WP_032466941.1;Name=WP_032466941.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_032466941.1;transl_table=11 NC_009708.1 RefSeq gene 2100963 2101292 . + . ID=gene1841;Name=YPSIP31758_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10425;old_locus_tag=YpsIP31758_1816 NC_009708.1 Protein Homology CDS 2100963 2101292 . + 0 ID=cds1781;Parent=gene1841;Dbxref=Genbank:WP_002214609.1;Name=WP_002214609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214609.1;transl_table=11 NC_009708.1 RefSeq gene 2101289 2101612 . + . ID=gene1842;Name=YPSIP31758_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10430;old_locus_tag=YpsIP31758_1817 NC_009708.1 Protein Homology CDS 2101289 2101612 . + 0 ID=cds1782;Parent=gene1842;Dbxref=Genbank:WP_002211007.1;Name=WP_002211007.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211007.1;transl_table=11 NC_009708.1 RefSeq gene 2101668 2102504 . - . ID=gene1843;Name=YPSIP31758_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10435;old_locus_tag=YpsIP31758_1818 NC_009708.1 Protein Homology CDS 2101668 2102504 . - 0 ID=cds1783;Parent=gene1843;Dbxref=Genbank:WP_012105056.1;Name=WP_012105056.1;gbkey=CDS;product=peptidase;protein_id=WP_012105056.1;transl_table=11 NC_009708.1 RefSeq gene 2102838 2103122 . - . ID=gene1844;Name=YPSIP31758_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10440;old_locus_tag=YpsIP31758_1819 NC_009708.1 Protein Homology CDS 2102838 2103122 . - 0 ID=cds1784;Parent=gene1844;Dbxref=Genbank:WP_012105057.1;Name=WP_012105057.1;gbkey=CDS;product=acid-shock protein;protein_id=WP_012105057.1;transl_table=11 NC_009708.1 RefSeq gene 2103119 2103331 . - . ID=gene1845;Name=YPSIP31758_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10445 NC_009708.1 Protein Homology CDS 2103119 2103331 . - 0 ID=cds1785;Parent=gene1845;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11 NC_009708.1 RefSeq gene 2103726 2104280 . + . ID=gene1846;Name=YPSIP31758_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10450;old_locus_tag=YpsIP31758_1820 NC_009708.1 Protein Homology CDS 2103726 2104280 . + 0 ID=cds1786;Parent=gene1846;Dbxref=Genbank:WP_002211010.1;Name=WP_002211010.1;gbkey=CDS;product=cytochrome B561;protein_id=WP_002211010.1;transl_table=11 NC_009708.1 RefSeq gene 2104306 2104884 . + . ID=gene1847;Name=YPSIP31758_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10455;old_locus_tag=YpsIP31758_1821 NC_009708.1 Protein Homology CDS 2104306 2104884 . + 0 ID=cds1787;Parent=gene1847;Dbxref=Genbank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211011.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2104921 2105095 . + . ID=id190;gbkey=repeat_region NC_009708.1 RefSeq gene 2105448 2105606 . + . ID=gene1848;Name=YPSIP31758_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10460;old_locus_tag=YpsIP31758_1822 NC_009708.1 Protein Homology CDS 2105448 2105606 . + 0 ID=cds1788;Parent=gene1848;Dbxref=Genbank:WP_012105058.1;Name=WP_012105058.1;gbkey=CDS;product=invertase;protein_id=WP_012105058.1;transl_table=11 NC_009708.1 RefSeq gene 2105710 2108694 . - . ID=gene1849;Name=YPSIP31758_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10465;old_locus_tag=YpsIP31758_1823 NC_009708.1 Protein Homology CDS 2105710 2108694 . - 0 ID=cds1789;Parent=gene1849;Dbxref=Genbank:WP_012105059.1;Name=WP_012105059.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_012105059.1;transl_table=11 NC_009708.1 RefSeq gene 2109533 2111032 . - . ID=gene1850;Name=YPSIP31758_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10470;old_locus_tag=YpsIP31758_1824 NC_009708.1 Protein Homology CDS 2109533 2111032 . - 0 ID=cds1790;Parent=gene1850;Dbxref=Genbank:WP_012105060.1;Name=WP_012105060.1;gbkey=CDS;product=peptidase M32;protein_id=WP_012105060.1;transl_table=11 NC_009708.1 RefSeq gene 2111126 2112430 . - . ID=gene1851;Name=YPSIP31758_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10475;old_locus_tag=YpsIP31758_1825 NC_009708.1 Protein Homology CDS 2111126 2112430 . - 0 ID=cds1791;Parent=gene1851;Dbxref=Genbank:WP_002232819.1;Name=WP_002232819.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002232819.1;transl_table=11 NC_009708.1 RefSeq gene 2112430 2113176 . - . ID=gene1852;Name=YPSIP31758_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10480;old_locus_tag=YpsIP31758_1826 NC_009708.1 Protein Homology CDS 2112430 2113176 . - 0 ID=cds1792;Parent=gene1852;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11 NC_009708.1 RefSeq gene 2113473 2113889 . + . ID=gene1853;Name=YPSIP31758_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10485;old_locus_tag=YpsIP31758_1827 NC_009708.1 Protein Homology CDS 2113473 2113889 . + 0 ID=cds1793;Parent=gene1853;Dbxref=Genbank:WP_012105061.1;Name=WP_012105061.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105061.1;transl_table=11 NC_009708.1 RefSeq gene 2113913 2115304 . - . ID=gene1854;Name=YPSIP31758_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10490;old_locus_tag=YpsIP31758_1828 NC_009708.1 Protein Homology CDS 2113913 2115304 . - 0 ID=cds1794;Parent=gene1854;Dbxref=Genbank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_002211017.1;transl_table=11 NC_009708.1 RefSeq gene 2115574 2116527 . - . ID=gene1855;Name=YPSIP31758_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10495;old_locus_tag=YpsIP31758_1829 NC_009708.1 Protein Homology CDS 2115574 2116527 . - 0 ID=cds1795;Parent=gene1855;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11 NC_009708.1 RefSeq gene 2116733 2116936 . + . ID=gene1856;Name=YPSIP31758_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10500 NC_009708.1 Protein Homology CDS 2116733 2116936 . + 0 ID=cds1796;Parent=gene1856;Dbxref=Genbank:WP_011192504.1;Name=WP_011192504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192504.1;transl_table=11 NC_009708.1 RefSeq gene 2117057 2118583 . + . ID=gene1857;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10505;old_locus_tag=YpsIP31758_1830 NC_009708.1 Protein Homology CDS 2117057 2118583 . + 0 ID=cds1797;Parent=gene1857;Dbxref=Genbank:WP_012105062.1;Name=WP_012105062.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_012105062.1;transl_table=11 NC_009708.1 RefSeq gene 2118656 2120050 . + . ID=gene1858;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10510;old_locus_tag=YpsIP31758_1831 NC_009708.1 Protein Homology CDS 2118656 2120050 . + 0 ID=cds1798;Parent=gene1858;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11 NC_009708.1 RefSeq gene 2120141 2121097 . - . ID=gene1859;Name=YPSIP31758_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10515;old_locus_tag=YpsIP31758_1832 NC_009708.1 Protein Homology CDS 2120141 2121097 . - 0 ID=cds1799;Parent=gene1859;Dbxref=Genbank:WP_002211021.1;Name=WP_002211021.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein E;protein_id=WP_002211021.1;transl_table=11 NC_009708.1 RefSeq gene 2121232 2121984 . - . ID=gene1860;Name=YPSIP31758_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10520;old_locus_tag=YpsIP31758_1833 NC_009708.1 Protein Homology CDS 2121232 2121984 . - 0 ID=cds1800;Parent=gene1860;Dbxref=Genbank:WP_011192502.1;Name=WP_011192502.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate/nitrate reduction transcriptional regulator;protein_id=WP_011192502.1;transl_table=11 NC_009708.1 RefSeq gene 2122057 2122575 . - . ID=gene1861;Name=YPSIP31758_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10525;old_locus_tag=YpsIP31758_1834 NC_009708.1 Protein Homology CDS 2122057 2122575 . - 0 ID=cds1801;Parent=gene1861;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11 NC_009708.1 RefSeq gene 2122833 2124278 . + . ID=gene1862;Name=YPSIP31758_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10530;old_locus_tag=YpsIP31758_1835 NC_009708.1 Protein Homology CDS 2122833 2124278 . + 0 ID=cds1802;Parent=gene1862;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NC_009708.1 RefSeq gene 2124825 2125836 . + . ID=gene1863;Name=YPSIP31758_RS10535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS10535;pseudo=true NC_009708.1 Protein Homology CDS 2124825 2125836 . + 0 ID=cds1803;Parent=gene1863;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2125836 2127221 . + . ID=gene1864;Name=YPSIP31758_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10540 NC_009708.1 Protein Homology CDS 2125836 2127221 . + 0 ID=cds1804;Parent=gene1864;Dbxref=Genbank:WP_041175761.1;Name=WP_041175761.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175761.1;transl_table=11 NC_009708.1 RefSeq gene 2127367 2128041 . + . ID=gene1865;Name=YPSIP31758_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10545;old_locus_tag=YpsIP31758_1837 NC_009708.1 Protein Homology CDS 2127367 2128041 . + 0 ID=cds1805;Parent=gene1865;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11 NC_009708.1 RefSeq gene 2128108 2128395 . - . ID=gene1866;Name=YPSIP31758_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10550;old_locus_tag=YpsIP31758_1838 NC_009708.1 Protein Homology CDS 2128108 2128395 . - 0 ID=cds1806;Parent=gene1866;Dbxref=Genbank:WP_029793741.1;Name=WP_029793741.1;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;gbkey=CDS;product=acetolactate synthase 1 regulatory subunit;protein_id=WP_029793741.1;transl_table=11 NC_009708.1 RefSeq gene 2128457 2130124 . - . ID=gene1867;Name=YPSIP31758_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10555;old_locus_tag=YpsIP31758_1839 NC_009708.1 Protein Homology CDS 2128457 2130124 . - 0 ID=cds1807;Parent=gene1867;Dbxref=Genbank:WP_002211027.1;Name=WP_002211027.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211027.1;transl_table=11 NC_009708.1 RefSeq gene 2130712 2131506 . + . ID=gene1868;Name=YPSIP31758_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10560;old_locus_tag=YpsIP31758_1841 NC_009708.1 Protein Homology CDS 2130712 2131506 . + 0 ID=cds1808;Parent=gene1868;Dbxref=Genbank:WP_012105065.1;Name=WP_012105065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105065.1;transl_table=11 NC_009708.1 RefSeq gene 2131675 2134215 . - . ID=gene1869;Name=YPSIP31758_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10565;old_locus_tag=YpsIP31758_1842 NC_009708.1 Protein Homology CDS 2131675 2134215 . - 0 ID=cds1809;Parent=gene1869;Dbxref=Genbank:WP_012105066.1;Name=WP_012105066.1;gbkey=CDS;product=virulence factor;protein_id=WP_012105066.1;transl_table=11 NC_009708.1 RefSeq gene 2134212 2137283 . - . ID=gene1870;Name=YPSIP31758_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10570;old_locus_tag=YpsIP31758_1843 NC_009708.1 Protein Homology CDS 2134212 2137283 . - 0 ID=cds1810;Parent=gene1870;Dbxref=Genbank:WP_012105067.1;Name=WP_012105067.1;gbkey=CDS;product=virulence factor SrfB;protein_id=WP_012105067.1;transl_table=11 NC_009708.1 RefSeq gene 2137288 2138766 . - . ID=gene1871;Name=YPSIP31758_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10575;old_locus_tag=YpsIP31758_1844 NC_009708.1 Protein Homology CDS 2137288 2138766 . - 0 ID=cds1811;Parent=gene1871;Dbxref=Genbank:WP_012105068.1;Name=WP_012105068.1;gbkey=CDS;product=virulence factor;protein_id=WP_012105068.1;transl_table=11 NC_009708.1 RefSeq gene 2138972 2140462 . + . ID=gene1872;Name=YPSIP31758_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10580;old_locus_tag=YpsIP31758_1846 NC_009708.1 Protein Homology CDS 2138972 2140462 . + 0 ID=cds1812;Parent=gene1872;Dbxref=Genbank:WP_002223601.1;Name=WP_002223601.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_002223601.1;transl_table=11 NC_009708.1 RefSeq gene 2140887 2141705 . - . ID=gene1873;Name=YPSIP31758_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10585;old_locus_tag=YpsIP31758_1847 NC_009708.1 Protein Homology CDS 2140887 2141705 . - 0 ID=cds1813;Parent=gene1873;Dbxref=Genbank:WP_011192495.1;Name=WP_011192495.1;gbkey=CDS;product=sulfonate ABC transporter ATP-binding protein;protein_id=WP_011192495.1;transl_table=11 NC_009708.1 RefSeq gene 2141715 2142536 . - . ID=gene1874;Name=YPSIP31758_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10590;old_locus_tag=YpsIP31758_1848 NC_009708.1 Protein Homology CDS 2141715 2142536 . - 0 ID=cds1814;Parent=gene1874;Dbxref=Genbank:WP_002211034.1;Name=WP_002211034.1;gbkey=CDS;product=sulfonate ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NC_009708.1 RefSeq gene 2142540 2143571 . - . ID=gene1875;Name=YPSIP31758_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10595;old_locus_tag=YpsIP31758_1849 NC_009708.1 Protein Homology CDS 2142540 2143571 . - 0 ID=cds1815;Parent=gene1875;Dbxref=Genbank:WP_011192494.1;Name=WP_011192494.1;gbkey=CDS;product=myristoyl transferase;protein_id=WP_011192494.1;transl_table=11 NC_009708.1 RefSeq gene 2144326 2144979 . + . ID=gene1876;Name=YPSIP31758_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10600;old_locus_tag=YpsIP31758_1850 NC_009708.1 Protein Homology CDS 2144326 2144979 . + 0 ID=cds1816;Parent=gene1876;Dbxref=Genbank:WP_012105069.1;Name=WP_012105069.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105069.1;transl_table=11 NC_009708.1 RefSeq gene 2144976 2146514 . + . ID=gene1877;Name=YPSIP31758_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10605;old_locus_tag=YpsIP31758_1851 NC_009708.1 Protein Homology CDS 2144976 2146514 . + 0 ID=cds1817;Parent=gene1877;Dbxref=Genbank:WP_011192492.1;Name=WP_011192492.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192492.1;transl_table=11 NC_009708.1 RefSeq gene 2146559 2147602 . + . ID=gene1878;Name=YPSIP31758_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10610;old_locus_tag=YpsIP31758_1852 NC_009708.1 Protein Homology CDS 2146559 2147602 . + 0 ID=cds1818;Parent=gene1878;Dbxref=Genbank:WP_042592909.1;Name=WP_042592909.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_042592909.1;transl_table=11 NC_009708.1 RefSeq gene 2147801 2148751 . + . ID=gene1879;Name=YPSIP31758_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10615;old_locus_tag=YpsIP31758_1853 NC_009708.1 Protein Homology CDS 2147801 2148751 . + 0 ID=cds1819;Parent=gene1879;Dbxref=Genbank:WP_012105073.1;Name=WP_012105073.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_012105073.1;transl_table=11 NC_009708.1 RefSeq gene 2148895 2149365 . + . ID=gene1880;Name=YPSIP31758_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10620;old_locus_tag=YpsIP31758_1854 NC_009708.1 Protein Homology CDS 2148895 2149365 . + 0 ID=cds1820;Parent=gene1880;Dbxref=Genbank:WP_011192489.1;Name=WP_011192489.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192489.1;transl_table=11 NC_009708.1 RefSeq gene 2149429 2150445 . + . ID=gene1881;Name=YPSIP31758_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10625;old_locus_tag=YpsIP31758_1855 NC_009708.1 Protein Homology CDS 2149429 2150445 . + 0 ID=cds1821;Parent=gene1881;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NC_009708.1 RefSeq gene 2150590 2152044 . + . ID=gene1882;Name=YPSIP31758_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10630;old_locus_tag=YpsIP31758_1856 NC_009708.1 Protein Homology CDS 2150590 2152044 . + 0 ID=cds1822;Parent=gene1882;Dbxref=Genbank:WP_012105074.1;Name=WP_012105074.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_012105074.1;transl_table=11 NC_009708.1 RefSeq gene 2152031 2153209 . + . ID=gene1883;Name=YPSIP31758_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10635;old_locus_tag=YpsIP31758_1857 NC_009708.1 Protein Homology CDS 2152031 2153209 . + 0 ID=cds1823;Parent=gene1883;Dbxref=Genbank:WP_011192488.1;Name=WP_011192488.1;gbkey=CDS;product=aminotransferase;protein_id=WP_011192488.1;transl_table=11 NC_009708.1 RefSeq gene 2153357 2153489 . + . ID=gene1884;Name=YPSIP31758_RS10640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS10640;pseudo=true NC_009708.1 Protein Homology CDS 2153357 2153489 . + 0 ID=cds1824;Parent=gene1884;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2153920 2154375 . + . ID=gene1885;Name=YPSIP31758_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10645;old_locus_tag=YpsIP31758_1858 NC_009708.1 GeneMarkS+ CDS 2153920 2154375 . + 0 ID=cds1825;Parent=gene1885;Dbxref=Genbank:WP_012105075.1;Name=WP_012105075.1;gbkey=CDS;product=superantigen YpmA;protein_id=WP_012105075.1;transl_table=11 NC_009708.1 RefSeq gene 2154709 2155632 . - . ID=gene1886;Name=YPSIP31758_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10650;old_locus_tag=YpsIP31758_1859 NC_009708.1 Protein Homology CDS 2154709 2155632 . - 0 ID=cds1826;Parent=gene1886;Dbxref=Genbank:WP_012105076.1;Name=WP_012105076.1;gbkey=CDS;product=drug/metabolite transporter DMT permease;protein_id=WP_012105076.1;transl_table=11 NC_009708.1 RefSeq gene 2156206 2156649 . + . ID=gene1887;Name=YPSIP31758_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10655;old_locus_tag=YpsIP31758_1861 NC_009708.1 Protein Homology CDS 2156206 2156649 . + 0 ID=cds1827;Parent=gene1887;Dbxref=Genbank:WP_041175762.1;Name=WP_041175762.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175762.1;transl_table=11 NC_009708.1 RefSeq gene 2156744 2158264 . - . ID=gene1888;Name=YPSIP31758_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10660;old_locus_tag=YpsIP31758_1862 NC_009708.1 Protein Homology CDS 2156744 2158264 . - 0 ID=cds1828;Parent=gene1888;Dbxref=Genbank:WP_012105079.1;Name=WP_012105079.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_012105079.1;transl_table=11 NC_009708.1 RefSeq gene 2158560 2160377 . + . ID=gene1889;Name=YPSIP31758_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10665;old_locus_tag=YpsIP31758_1863 NC_009708.1 Protein Homology CDS 2158560 2160377 . + 0 ID=cds1829;Parent=gene1889;Dbxref=Genbank:WP_012105080.1;Name=WP_012105080.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_012105080.1;transl_table=11 NC_009708.1 RefSeq gene 2160491 2161240 . + . ID=gene1890;Name=YPSIP31758_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10670;old_locus_tag=YpsIP31758_1864 NC_009708.1 Protein Homology CDS 2160491 2161240 . + 0 ID=cds1830;Parent=gene1890;Dbxref=Genbank:WP_011192483.1;Name=WP_011192483.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;product=malonic semialdehyde reductase;protein_id=WP_011192483.1;transl_table=11 NC_009708.1 RefSeq gene 2161470 2161841 . + . ID=gene1891;Name=YPSIP31758_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10675;old_locus_tag=YpsIP31758_1865 NC_009708.1 Protein Homology CDS 2161470 2161841 . + 0 ID=cds1831;Parent=gene1891;Dbxref=Genbank:WP_032466936.1;Name=WP_032466936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466936.1;transl_table=11 NC_009708.1 RefSeq gene 2162055 2162300 . + . ID=gene1892;Name=YPSIP31758_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10680;old_locus_tag=YpsIP31758_1866 NC_009708.1 Protein Homology CDS 2162055 2162300 . + 0 ID=cds1832;Parent=gene1892;Dbxref=Genbank:WP_011192481.1;Name=WP_011192481.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192481.1;transl_table=11 NC_009708.1 RefSeq gene 2162446 2163726 . + . ID=gene1893;Name=YPSIP31758_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10685;old_locus_tag=YpsIP31758_1867 NC_009708.1 Protein Homology CDS 2162446 2163726 . + 0 ID=cds1833;Parent=gene1893;Dbxref=Genbank:WP_012413730.1;Name=WP_012413730.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_012413730.1;transl_table=11 NC_009708.1 RefSeq gene 2163832 2164500 . - . ID=gene1894;Name=YPSIP31758_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10690;old_locus_tag=YpsIP31758_1868 NC_009708.1 Protein Homology CDS 2163832 2164500 . - 0 ID=cds1834;Parent=gene1894;Dbxref=Genbank:WP_002210575.1;Name=WP_002210575.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002210575.1;transl_table=11 NC_009708.1 RefSeq gene 2164724 2165941 . - . ID=gene1895;Name=YPSIP31758_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10695;old_locus_tag=YpsIP31758_1869 NC_009708.1 Protein Homology CDS 2164724 2165941 . - 0 ID=cds1835;Parent=gene1895;Dbxref=Genbank:WP_002210576.1;Name=WP_002210576.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210576.1;transl_table=11 NC_009708.1 RefSeq gene 2166120 2167034 . - . ID=gene1896;Name=YPSIP31758_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10700;old_locus_tag=YpsIP31758_1870 NC_009708.1 Protein Homology CDS 2166120 2167034 . - 0 ID=cds1836;Parent=gene1896;Dbxref=Genbank:WP_012105081.1;Name=WP_012105081.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012105081.1;transl_table=11 NC_009708.1 RefSeq gene 2167247 2168545 . + . ID=gene1897;Name=YPSIP31758_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10705;old_locus_tag=YpsIP31758_1871 NC_009708.1 Protein Homology CDS 2167247 2168545 . + 0 ID=cds1837;Parent=gene1897;Dbxref=Genbank:WP_011192477.1;Name=WP_011192477.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192477.1;transl_table=11 NC_009708.1 RefSeq gene 2168751 2169686 . + . ID=gene1898;Name=YPSIP31758_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10710;old_locus_tag=YpsIP31758_1872 NC_009708.1 Protein Homology CDS 2168751 2169686 . + 0 ID=cds1838;Parent=gene1898;Dbxref=Genbank:WP_012105083.1;Name=WP_012105083.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_012105083.1;transl_table=11 NC_009708.1 RefSeq gene 2169766 2171163 . - . ID=gene1899;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10715;old_locus_tag=YpsIP31758_1873 NC_009708.1 Protein Homology CDS 2169766 2171163 . - 0 ID=cds1839;Parent=gene1899;Dbxref=Genbank:WP_012105084.1;Name=WP_012105084.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=WP_012105084.1;transl_table=11 NC_009708.1 RefSeq gene 2171447 2172622 . + . ID=gene1900;Name=YPSIP31758_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10720;old_locus_tag=YpsIP31758_1874 NC_009708.1 Protein Homology CDS 2171447 2172622 . + 0 ID=cds1840;Parent=gene1900;Dbxref=Genbank:WP_012105085.1;Name=WP_012105085.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_012105085.1;transl_table=11 NC_009708.1 RefSeq gene 2172862 2174406 . + . ID=gene1901;Name=YPSIP31758_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10725;old_locus_tag=YpsIP31758_1875 NC_009708.1 Protein Homology CDS 2172862 2174406 . + 0 ID=cds1841;Parent=gene1901;Dbxref=Genbank:WP_011192473.1;Name=WP_011192473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192473.1;transl_table=11 NC_009708.1 RefSeq gene 2174747 2175676 . + . ID=gene1902;Name=YPSIP31758_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10730;old_locus_tag=YpsIP31758_1876 NC_009708.1 Protein Homology CDS 2174747 2175676 . + 0 ID=cds1842;Parent=gene1902;Dbxref=Genbank:WP_012105086.1;Name=WP_012105086.1;gbkey=CDS;product=PEP phosphonomutase;protein_id=WP_012105086.1;transl_table=11 NC_009708.1 RefSeq gene 2175849 2177105 . - . ID=gene1903;Name=YPSIP31758_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10735;old_locus_tag=YpsIP31758_1877 NC_009708.1 Protein Homology CDS 2175849 2177105 . - 0 ID=cds1843;Parent=gene1903;Dbxref=Genbank:WP_012105087.1;Name=WP_012105087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105087.1;transl_table=11 NC_009708.1 RefSeq gene 2177494 2178498 . + . ID=gene1904;Name=YPSIP31758_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10740;old_locus_tag=YpsIP31758_1878 NC_009708.1 Protein Homology CDS 2177494 2178498 . + 0 ID=cds1844;Parent=gene1904;Dbxref=Genbank:WP_012105088.1;Name=WP_012105088.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_012105088.1;transl_table=11 NC_009708.1 RefSeq gene 2178673 2179701 . - . ID=gene1905;Name=YPSIP31758_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10745;old_locus_tag=YpsIP31758_1880 NC_009708.1 Protein Homology CDS 2178673 2179701 . - 0 ID=cds1845;Parent=gene1905;Dbxref=Genbank:WP_011192468.1;Name=WP_011192468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192468.1;transl_table=11 NC_009708.1 RefSeq gene 2179895 2180944 . - . ID=gene1906;Name=YPSIP31758_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10750;old_locus_tag=YpsIP31758_1881 NC_009708.1 Protein Homology CDS 2179895 2180944 . - 0 ID=cds1846;Parent=gene1906;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NC_009708.1 RefSeq gene 2181072 2182004 . - . ID=gene1907;Name=YPSIP31758_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10755;old_locus_tag=YpsIP31758_1882 NC_009708.1 Protein Homology CDS 2181072 2182004 . - 0 ID=cds1847;Parent=gene1907;Dbxref=Genbank:WP_011192467.1;Name=WP_011192467.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192467.1;transl_table=11 NC_009708.1 RefSeq gene 2182239 2183288 . - . ID=gene1908;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10760;old_locus_tag=YpsIP31758_1883 NC_009708.1 Protein Homology CDS 2182239 2183288 . - 0 ID=cds1848;Parent=gene1908;Dbxref=Genbank:WP_011192466.1;Name=WP_011192466.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_011192466.1;transl_table=11 NC_009708.1 RefSeq gene 2183306 2184877 . - . ID=gene1909;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10765;old_locus_tag=YpsIP31758_1884 NC_009708.1 Protein Homology CDS 2183306 2184877 . - 0 ID=cds1849;Parent=gene1909;Dbxref=Genbank:WP_012105090.1;Name=WP_012105090.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_012105090.1;transl_table=11 NC_009708.1 RefSeq gene 2184975 2185958 . - . ID=gene1910;Name=YPSIP31758_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10770;old_locus_tag=YpsIP31758_1885 NC_009708.1 Protein Homology CDS 2184975 2185958 . - 0 ID=cds1850;Parent=gene1910;Dbxref=Genbank:WP_002210589.1;Name=WP_002210589.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NC_009708.1 RefSeq gene 2186365 2188068 . + . ID=gene1911;Name=YPSIP31758_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10775;old_locus_tag=YpsIP31758_1886 NC_009708.1 Protein Homology CDS 2186365 2188068 . + 0 ID=cds1851;Parent=gene1911;Dbxref=Genbank:WP_012105091.1;Name=WP_012105091.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_012105091.1;transl_table=11 NC_009708.1 RefSeq gene 2188152 2189654 . + . ID=gene1912;Name=YPSIP31758_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10780;old_locus_tag=YpsIP31758_1887 NC_009708.1 Protein Homology CDS 2188152 2189654 . + 0 ID=cds1852;Parent=gene1912;Dbxref=Genbank:WP_012105092.1;Name=WP_012105092.1;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_012105092.1;transl_table=11 NC_009708.1 RefSeq gene 2189866 2192004 . - . ID=gene1913;Name=YPSIP31758_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10785;old_locus_tag=YpsIP31758_1889 NC_009708.1 Protein Homology CDS 2189866 2192004 . - 0 ID=cds1853;Parent=gene1913;Dbxref=Genbank:WP_012105093.1;Name=WP_012105093.1;gbkey=CDS;product=peptidase C39;protein_id=WP_012105093.1;transl_table=11 NC_009708.1 RefSeq gene 2192006 2193376 . - . ID=gene1914;Name=YPSIP31758_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10790;old_locus_tag=YpsIP31758_1890 NC_009708.1 Protein Homology CDS 2192006 2193376 . - 0 ID=cds1854;Parent=gene1914;Dbxref=Genbank:WP_011192461.1;Name=WP_011192461.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_011192461.1;transl_table=11 NC_009708.1 RefSeq gene 2193421 2195568 . - . ID=gene1915;Name=YPSIP31758_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10795;old_locus_tag=YpsIP31758_1891 NC_009708.1 Protein Homology CDS 2193421 2195568 . - 0 ID=cds1855;Parent=gene1915;Dbxref=Genbank:WP_012105094.1;Name=WP_012105094.1;gbkey=CDS;product=peptidase C39;protein_id=WP_012105094.1;transl_table=11 NC_009708.1 RefSeq gene 2196043 2196486 . + . ID=gene1916;Name=YPSIP31758_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10800;old_locus_tag=YpsIP31758_1893 NC_009708.1 Protein Homology CDS 2196043 2196486 . + 0 ID=cds1856;Parent=gene1916;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11 NC_009708.1 RefSeq gene 2196614 2197195 . + . ID=gene1917;Name=YPSIP31758_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10805;old_locus_tag=YpsIP31758_1894 NC_009708.1 Protein Homology CDS 2196614 2197195 . + 0 ID=cds1857;Parent=gene1917;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11 NC_009708.1 RefSeq gene 2197195 2197818 . + . ID=gene1918;Name=YPSIP31758_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10810;old_locus_tag=YpsIP31758_1895 NC_009708.1 Protein Homology CDS 2197195 2197818 . + 0 ID=cds1858;Parent=gene1918;Dbxref=Genbank:WP_011192459.1;Name=WP_011192459.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transporter RnfB;protein_id=WP_011192459.1;transl_table=11 NC_009708.1 RefSeq gene 2197811 2199907 . + . ID=gene1919;Name=YPSIP31758_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10815;old_locus_tag=YpsIP31758_1896 NC_009708.1 Protein Homology CDS 2197811 2199907 . + 0 ID=cds1859;Parent=gene1919;Dbxref=Genbank:WP_012105096.1;Name=WP_012105096.1;gbkey=CDS;product=electron transport complex subunit C;protein_id=WP_012105096.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2199486 2199888 . + . ID=id191;gbkey=repeat_region NC_009708.1 RefSeq gene 2200012 2200905 . - . ID=gene1920;Name=YPSIP31758_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10820;old_locus_tag=YpsIP31758_1897 NC_009708.1 Protein Homology CDS 2200012 2200905 . - 0 ID=cds1860;Parent=gene1920;Dbxref=Genbank:WP_002210598.1;Name=WP_002210598.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210598.1;transl_table=11 NC_009708.1 RefSeq gene 2201394 2202488 . + . ID=gene1921;Name=YPSIP31758_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10825;old_locus_tag=YpsIP31758_1898 NC_009708.1 Protein Homology CDS 2201394 2202488 . + 0 ID=cds1861;Parent=gene1921;Dbxref=Genbank:WP_032466417.1;Name=WP_032466417.1;gbkey=CDS;product=electron transporter RnfD;protein_id=WP_032466417.1;transl_table=11 NC_009708.1 RefSeq gene 2202498 2203127 . + . ID=gene1922;Name=YPSIP31758_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10830;old_locus_tag=YpsIP31758_1899 NC_009708.1 Protein Homology CDS 2202498 2203127 . + 0 ID=cds1862;Parent=gene1922;Dbxref=Genbank:WP_012105098.1;Name=WP_012105098.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex protein RsxA;protein_id=WP_012105098.1;transl_table=11 NC_009708.1 RefSeq gene 2203124 2203825 . + . ID=gene1923;Name=YPSIP31758_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10835;old_locus_tag=YpsIP31758_1900 NC_009708.1 Protein Homology CDS 2203124 2203825 . + 0 ID=cds1863;Parent=gene1923;Dbxref=Genbank:WP_002210601.1;Name=WP_002210601.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_002210601.1;transl_table=11 NC_009708.1 RefSeq gene 2203822 2204463 . + . ID=gene1924;Name=YPSIP31758_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10840;old_locus_tag=YpsIP31758_1901 NC_009708.1 Protein Homology CDS 2203822 2204463 . + 0 ID=cds1864;Parent=gene1924;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NC_009708.1 RefSeq gene 2204646 2205644 . - . ID=gene1925;Name=YPSIP31758_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10845;old_locus_tag=YpsIP31758_1902 NC_009708.1 Protein Homology CDS 2204646 2205644 . - 0 ID=cds1865;Parent=gene1925;Dbxref=Genbank:WP_012105099.1;Name=WP_012105099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105099.1;transl_table=11 NC_009708.1 RefSeq gene 2205682 2206992 . - . ID=gene1926;Name=YPSIP31758_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10850;old_locus_tag=YpsIP31758_1903 NC_009708.1 Protein Homology CDS 2205682 2206992 . - 0 ID=cds1866;Parent=gene1926;Dbxref=Genbank:WP_011192453.1;Name=WP_011192453.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011192453.1;transl_table=11 NC_009708.1 RefSeq gene 2207641 2209575 . + . ID=gene1927;Name=YPSIP31758_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10855;old_locus_tag=YpsIP31758_1904 NC_009708.1 Protein Homology CDS 2207641 2209575 . + 0 ID=cds1867;Parent=gene1927;Dbxref=Genbank:WP_012105100.1;Name=WP_012105100.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_012105100.1;transl_table=11 NC_009708.1 RefSeq gene 2209925 2211991 . + . ID=gene1928;Name=YPSIP31758_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10860;old_locus_tag=YpsIP31758_1905 NC_009708.1 Protein Homology CDS 2209925 2211991 . + 0 ID=cds1868;Parent=gene1928;Dbxref=Genbank:WP_002220371.1;Name=WP_002220371.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_002220371.1;transl_table=11 NC_009708.1 RefSeq gene 2211984 2212289 . + . ID=gene1929;Name=YPSIP31758_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10865;old_locus_tag=YpsIP31758_1907 NC_009708.1 Protein Homology CDS 2211984 2212289 . + 0 ID=cds1869;Parent=gene1929;Dbxref=Genbank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210607.1;transl_table=11 NC_009708.1 RefSeq gene 2212406 2213071 . - . ID=gene1930;Name=YPSIP31758_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10870;old_locus_tag=YpsIP31758_1908 NC_009708.1 Protein Homology CDS 2212406 2213071 . - 0 ID=cds1870;Parent=gene1930;Dbxref=Genbank:WP_012105101.1;Name=WP_012105101.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_012105101.1;transl_table=11 NC_009708.1 RefSeq gene 2213405 2213653 . + . ID=gene1931;Name=YPSIP31758_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10875;old_locus_tag=YpsIP31758_1909 NC_009708.1 Protein Homology CDS 2213405 2213653 . + 0 ID=cds1871;Parent=gene1931;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11 NC_009708.1 RefSeq gene 2213682 2214377 . - . ID=gene1932;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10880;old_locus_tag=YpsIP31758_1910 NC_009708.1 Protein Homology CDS 2213682 2214377 . - 0 ID=cds1872;Parent=gene1932;Dbxref=Genbank:WP_012105102.1;Name=WP_012105102.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_012105102.1;transl_table=11 NC_009708.1 RefSeq gene 2214857 2215072 . + . ID=gene1933;Name=YPSIP31758_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10885;old_locus_tag=YpsIP31758_1911 NC_009708.1 Protein Homology CDS 2214857 2215072 . + 0 ID=cds1873;Parent=gene1933;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11 NC_009708.1 RefSeq gene 2215352 2215678 . - . ID=gene1934;Name=YPSIP31758_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10890;old_locus_tag=YpsIP31758_1912 NC_009708.1 Protein Homology CDS 2215352 2215678 . - 0 ID=cds1874;Parent=gene1934;Dbxref=Genbank:WP_002210612.1;Name=WP_002210612.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_002210612.1;transl_table=11 NC_009708.1 RefSeq gene 2215678 2216415 . - . ID=gene1935;Name=YPSIP31758_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10895;old_locus_tag=YpsIP31758_1913 NC_009708.1 Protein Homology CDS 2215678 2216415 . - 0 ID=cds1875;Parent=gene1935;Dbxref=Genbank:WP_011192450.1;Name=WP_011192450.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_011192450.1;transl_table=11 NC_009708.1 RefSeq gene 2216885 2217184 . + . ID=gene1936;Name=YPSIP31758_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10900;old_locus_tag=YpsIP31758_1914 NC_009708.1 Protein Homology CDS 2216885 2217184 . + 0 ID=cds1876;Parent=gene1936;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NC_009708.1 RefSeq gene 2217306 2218475 . - . ID=gene1937;Name=YPSIP31758_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10905;old_locus_tag=YpsIP31758_1915 NC_009708.1 Protein Homology CDS 2217306 2218475 . - 0 ID=cds1877;Parent=gene1937;Dbxref=Genbank:WP_011192449.1;Name=WP_011192449.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192449.1;transl_table=11 NC_009708.1 RefSeq gene 2218482 2218793 . - . ID=gene1938;Name=YPSIP31758_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10910;old_locus_tag=YpsIP31758_1916 NC_009708.1 Protein Homology CDS 2218482 2218793 . - 0 ID=cds1878;Parent=gene1938;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11 NC_009708.1 RefSeq gene 2218974 2219735 . - . ID=gene1939;Name=YPSIP31758_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10915;old_locus_tag=YpsIP31758_1917 NC_009708.1 Protein Homology CDS 2218974 2219735 . - 0 ID=cds1879;Parent=gene1939;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NC_009708.1 RefSeq gene 2220241 2220831 . + . ID=gene1940;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10920;old_locus_tag=YpsIP31758_1919 NC_009708.1 Protein Homology CDS 2220241 2220831 . + 0 ID=cds1880;Parent=gene1940;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11 NC_009708.1 RefSeq gene 2220995 2223667 . - . ID=gene1941;Name=YPSIP31758_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10925;old_locus_tag=YpsIP31758_1920 NC_009708.1 Protein Homology CDS 2220995 2223667 . - 0 ID=cds1881;Parent=gene1941;Dbxref=Genbank:WP_012105103.1;Name=WP_012105103.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_012105103.1;transl_table=11 NC_009708.1 RefSeq gene 2224031 2224882 . - . ID=gene1942;Name=YPSIP31758_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10930;old_locus_tag=YpsIP31758_1921 NC_009708.1 Protein Homology CDS 2224031 2224882 . - 0 ID=cds1882;Parent=gene1942;Dbxref=Genbank:WP_012105104.1;Name=WP_012105104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105104.1;transl_table=11 NC_009708.1 RefSeq gene 2225219 2226193 . - . ID=gene1943;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10935;old_locus_tag=YpsIP31758_1922 NC_009708.1 Protein Homology CDS 2225219 2226193 . - 0 ID=cds1883;Parent=gene1943;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11 NC_009708.1 RefSeq gene 2226590 2229205 . - . ID=gene1944;Name=YPSIP31758_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10940;old_locus_tag=YpsIP31758_1923 NC_009708.1 Protein Homology CDS 2226590 2229205 . - 0 ID=cds1884;Parent=gene1944;Dbxref=Genbank:WP_012105105.1;Name=WP_012105105.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_012105105.1;transl_table=11 NC_009708.1 RefSeq gene 2229232 2229531 . - . ID=gene1945;Name=YPSIP31758_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10945 NC_009708.1 Protein Homology CDS 2229232 2229531 . - 0 ID=cds1885;Parent=gene1945;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NC_009708.1 RefSeq gene 2229624 2229875 . + . ID=gene1946;Name=YPSIP31758_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10950;old_locus_tag=YpsIP31758_1924 NC_009708.1 Protein Homology CDS 2229624 2229875 . + 0 ID=cds1886;Parent=gene1946;Dbxref=Genbank:WP_012105106.1;Name=WP_012105106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105106.1;transl_table=11 NC_009708.1 RefSeq gene 2229994 2231040 . - . ID=gene1947;Name=YPSIP31758_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10955;old_locus_tag=YpsIP31758_1925 NC_009708.1 Protein Homology CDS 2229994 2231040 . - 0 ID=cds1887;Parent=gene1947;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11 NC_009708.1 RefSeq gene 2231212 2231973 . + . ID=gene1948;Name=YPSIP31758_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10960;old_locus_tag=YpsIP31758_1926 NC_009708.1 Protein Homology CDS 2231212 2231973 . + 0 ID=cds1888;Parent=gene1948;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11 NC_009708.1 RefSeq gene 2231990 2232580 . + . ID=gene1949;Name=YPSIP31758_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10965;old_locus_tag=YpsIP31758_1927 NC_009708.1 Protein Homology CDS 2231990 2232580 . + 0 ID=cds1889;Parent=gene1949;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11 NC_009708.1 RefSeq gene 2232703 2233737 . - . ID=gene1950;Name=YPSIP31758_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10970;old_locus_tag=YpsIP31758_1928 NC_009708.1 Protein Homology CDS 2232703 2233737 . - 0 ID=cds1890;Parent=gene1950;Dbxref=Genbank:WP_002210627.1;Name=WP_002210627.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_002210627.1;transl_table=11 NC_009708.1 RefSeq gene 2234067 2234687 . - . ID=gene1951;Name=YPSIP31758_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10975;old_locus_tag=YpsIP31758_1929 NC_009708.1 Protein Homology CDS 2234067 2234687 . - 0 ID=cds1891;Parent=gene1951;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11 NC_009708.1 RefSeq gene 2234704 2235639 . - . ID=gene1952;Name=YPSIP31758_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10980;old_locus_tag=YpsIP31758_1930 NC_009708.1 Protein Homology CDS 2234704 2235639 . - 0 ID=cds1892;Parent=gene1952;Dbxref=Genbank:WP_002210629.1;Name=WP_002210629.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_002210629.1;transl_table=11 NC_009708.1 RefSeq gene 2235720 2235848 . + . ID=gene1953;Name=YPSIP31758_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10985 NC_009708.1 Protein Homology CDS 2235720 2235848 . + 0 ID=cds1893;Parent=gene1953;Dbxref=Genbank:WP_011192444.1;Name=WP_011192444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192444.1;transl_table=11 NC_009708.1 RefSeq gene 2235874 2235936 . + . ID=gene1954;Name=YPSIP31758_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10990;old_locus_tag=YpsIP31758_1931 NC_009708.1 Protein Homology CDS 2235874 2235936 . + 0 ID=cds1894;Parent=gene1954;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11 NC_009708.1 RefSeq gene 2236055 2237617 . + . ID=gene1955;Name=YPSIP31758_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS10995;old_locus_tag=YpsIP31758_1932 NC_009708.1 Protein Homology CDS 2236055 2237617 . + 0 ID=cds1895;Parent=gene1955;Dbxref=Genbank:WP_041175859.1;Name=WP_041175859.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase component I;protein_id=WP_041175859.1;transl_table=11 NC_009708.1 RefSeq gene 2237617 2238195 . + . ID=gene1956;Name=YPSIP31758_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11000;old_locus_tag=YpsIP31758_1933 NC_009708.1 Protein Homology CDS 2237617 2238195 . + 0 ID=cds1896;Parent=gene1956;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11 NC_009708.1 RefSeq gene 2238210 2239208 . + . ID=gene1957;Name=YPSIP31758_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11005;old_locus_tag=YpsIP31758_1934 NC_009708.1 Protein Homology CDS 2238210 2239208 . + 0 ID=cds1897;Parent=gene1957;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11 NC_009708.1 RefSeq gene 2239212 2240639 . + . ID=gene1958;Name=YPSIP31758_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11010;old_locus_tag=YpsIP31758_1935 NC_009708.1 Protein Homology CDS 2239212 2240639 . + 0 ID=cds1898;Parent=gene1958;Dbxref=Genbank:WP_012105108.1;Name=WP_012105108.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=phosphoribosylanthranilate isomerase;protein_id=WP_012105108.1;transl_table=11 NC_009708.1 RefSeq gene 2240774 2241964 . + . ID=gene1959;Name=YPSIP31758_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11015;old_locus_tag=YpsIP31758_1936 NC_009708.1 Protein Homology CDS 2240774 2241964 . + 0 ID=cds1899;Parent=gene1959;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NC_009708.1 RefSeq gene 2241964 2242770 . + . ID=gene1960;Name=YPSIP31758_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11020;old_locus_tag=YpsIP31758_1937 NC_009708.1 Protein Homology CDS 2241964 2242770 . + 0 ID=cds1900;Parent=gene1960;Dbxref=Genbank:WP_011192442.1;Name=WP_011192442.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_011192442.1;transl_table=11 NC_009708.1 RefSeq gene 2243113 2243427 . + . ID=gene1961;Name=YPSIP31758_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11025;old_locus_tag=YpsIP31758_1939 NC_009708.1 Protein Homology CDS 2243113 2243427 . + 0 ID=cds1901;Parent=gene1961;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11 NC_009708.1 RefSeq gene 2243574 2244221 . - . ID=gene1962;Name=YPSIP31758_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11030;old_locus_tag=YpsIP31758_1940 NC_009708.1 Protein Homology CDS 2243574 2244221 . - 0 ID=cds1902;Parent=gene1962;Dbxref=Genbank:WP_011171858.1;Name=WP_011171858.1;Note=receptor for colicin S4;gbkey=CDS;product=outer membrane protein W;protein_id=WP_011171858.1;transl_table=11 NC_009708.1 RefSeq gene 2244318 2244533 . - . ID=gene1963;Name=YPSIP31758_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11035;old_locus_tag=YpsIP31758_1941 NC_009708.1 Protein Homology CDS 2244318 2244533 . - 0 ID=cds1903;Parent=gene1963;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NC_009708.1 RefSeq gene 2244695 2245465 . + . ID=gene1964;Name=YPSIP31758_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11040;old_locus_tag=YpsIP31758_1942 NC_009708.1 Protein Homology CDS 2244695 2245465 . + 0 ID=cds1904;Parent=gene1964;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11 NC_009708.1 RefSeq gene 2245586 2247325 . - . ID=gene1965;Name=YPSIP31758_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11045;old_locus_tag=YpsIP31758_1943 NC_009708.1 Protein Homology CDS 2245586 2247325 . - 0 ID=cds1905;Parent=gene1965;Dbxref=Genbank:WP_011192440.1;Name=WP_011192440.1;gbkey=CDS;product=sulfate permease;protein_id=WP_011192440.1;transl_table=11 NC_009708.1 RefSeq gene 2247556 2248098 . + . ID=gene1966;Name=YPSIP31758_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11050;old_locus_tag=YpsIP31758_1944 NC_009708.1 Protein Homology CDS 2247556 2248098 . + 0 ID=cds1906;Parent=gene1966;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11 NC_009708.1 RefSeq gene 2248178 2248627 . + . ID=gene1967;Name=YPSIP31758_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11055;old_locus_tag=YpsIP31758_1945 NC_009708.1 Protein Homology CDS 2248178 2248627 . + 0 ID=cds1907;Parent=gene1967;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11 NC_009708.1 RefSeq gene 2248696 2249466 . - . ID=gene1968;Name=YPSIP31758_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11060;old_locus_tag=YpsIP31758_1946 NC_009708.1 Protein Homology CDS 2248696 2249466 . - 0 ID=cds1908;Parent=gene1968;Dbxref=Genbank:WP_012105110.1;Name=WP_012105110.1;gbkey=CDS;product=transporter TonB;protein_id=WP_012105110.1;transl_table=11 NC_009708.1 RefSeq gene 2249767 2250063 . + . ID=gene1969;Name=YPSIP31758_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11065;old_locus_tag=YpsIP31758_1947 NC_009708.1 Protein Homology CDS 2249767 2250063 . + 0 ID=cds1909;Parent=gene1969;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11 NC_009708.1 RefSeq gene 2250662 2250925 . - . ID=gene1970;Name=YPSIP31758_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11070;old_locus_tag=YpsIP31758_1949 NC_009708.1 Protein Homology CDS 2250662 2250925 . - 0 ID=cds1910;Parent=gene1970;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NC_009708.1 RefSeq gene 2251145 2251684 . - . ID=gene1971;Name=YPSIP31758_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11075;old_locus_tag=YpsIP31758_1951 NC_009708.1 Protein Homology CDS 2251145 2251684 . - 0 ID=cds1911;Parent=gene1971;Dbxref=Genbank:WP_002210646.1;Name=WP_002210646.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002210646.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2252422 2252596 . + . ID=id192;gbkey=repeat_region NC_009708.1 RefSeq gene 2252731 2254191 . + . ID=gene1972;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11080;old_locus_tag=YpsIP31758_1953 NC_009708.1 Protein Homology CDS 2252731 2254191 . + 0 ID=cds1912;Parent=gene1972;Dbxref=Genbank:WP_002210648.1;Name=WP_002210648.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_002210648.1;transl_table=11 NC_009708.1 RefSeq gene 2254356 2254679 . + . ID=gene1973;Name=YPSIP31758_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11085;old_locus_tag=YpsIP31758_1954 NC_009708.1 Protein Homology CDS 2254356 2254679 . + 0 ID=cds1913;Parent=gene1973;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NC_009708.1 RefSeq gene 2254978 2255193 . - . ID=gene1974;Name=YPSIP31758_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11090;old_locus_tag=YpsIP31758_1955 NC_009708.1 Protein Homology CDS 2254978 2255193 . - 0 ID=cds1914;Parent=gene1974;Dbxref=Genbank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NC_009708.1 RefSeq gene 2255764 2256765 . - . ID=gene1975;Name=YPSIP31758_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11095;old_locus_tag=YpsIP31758_1956 NC_009708.1 Protein Homology CDS 2255764 2256765 . - 0 ID=cds1915;Parent=gene1975;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11 NC_009708.1 RefSeq gene 2256762 2257763 . - . ID=gene1976;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11100;old_locus_tag=YpsIP31758_1957 NC_009708.1 Protein Homology CDS 2256762 2257763 . - 0 ID=cds1916;Parent=gene1976;Dbxref=Genbank:WP_012105111.1;Name=WP_012105111.1;gbkey=CDS;gene=oppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_012105111.1;transl_table=11 NC_009708.1 RefSeq gene 2257775 2258683 . - . ID=gene1977;Name=YPSIP31758_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11105;old_locus_tag=YpsIP31758_1958 NC_009708.1 Protein Homology CDS 2257775 2258683 . - 0 ID=cds1917;Parent=gene1977;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11 NC_009708.1 RefSeq gene 2258699 2259619 . - . ID=gene1978;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11110;old_locus_tag=YpsIP31758_1959 NC_009708.1 Protein Homology CDS 2258699 2259619 . - 0 ID=cds1918;Parent=gene1978;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11 NC_009708.1 RefSeq gene 2259706 2261343 . - . ID=gene1979;Name=YPSIP31758_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11115;old_locus_tag=YpsIP31758_1960 NC_009708.1 Protein Homology CDS 2259706 2261343 . - 0 ID=cds1919;Parent=gene1979;Dbxref=Genbank:WP_012105112.1;Name=WP_012105112.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_012105112.1;transl_table=11 NC_009708.1 RefSeq gene 2262181 2262825 . - . ID=gene1980;Name=YPSIP31758_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11120;old_locus_tag=YpsIP31758_1962 NC_009708.1 Protein Homology CDS 2262181 2262825 . - 0 ID=cds1920;Parent=gene1980;Dbxref=Genbank:WP_011192436.1;Name=WP_011192436.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192436.1;transl_table=11 NC_009708.1 RefSeq gene 2263660 2266335 . + . ID=gene1981;Name=YPSIP31758_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11125;old_locus_tag=YpsIP31758_1963 NC_009708.1 Protein Homology CDS 2263660 2266335 . + 0 ID=cds1921;Parent=gene1981;Dbxref=Genbank:WP_002210657.1;Name=WP_002210657.1;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_002210657.1;transl_table=11 NC_009708.1 RefSeq gene 2267086 2267676 . - . ID=gene1982;Name=YPSIP31758_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11130;old_locus_tag=YpsIP31758_1964 NC_009708.1 Protein Homology CDS 2267086 2267676 . - 0 ID=cds1922;Parent=gene1982;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NC_009708.1 RefSeq gene 2268426 2268833 . + . ID=gene1983;Name=YPSIP31758_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11135;old_locus_tag=YpsIP31758_1966 NC_009708.1 Protein Homology CDS 2268426 2268833 . + 0 ID=cds1923;Parent=gene1983;Dbxref=Genbank:WP_002223593.1;Name=WP_002223593.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002223593.1;transl_table=11 NC_009708.1 RefSeq gene 2268879 2269049 . + . ID=gene1984;Name=YPSIP31758_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11140 NC_009708.1 Protein Homology CDS 2268879 2269049 . + 0 ID=cds1924;Parent=gene1984;Dbxref=Genbank:WP_041175763.1;Name=WP_041175763.1;gbkey=CDS;product=transposase;protein_id=WP_041175763.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2268890 2269608 . + . ID=id193;gbkey=repeat_region NC_009708.1 RefSeq gene 2269039 2269497 . + . ID=gene1985;Name=YPSIP31758_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11145;old_locus_tag=YpsIP31758_1967 NC_009708.1 Protein Homology CDS 2269039 2269497 . + 0 ID=cds1925;Parent=gene1985;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_009708.1 RefSeq gene 2269978 2271324 . - . ID=gene1986;Name=YPSIP31758_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11150;old_locus_tag=YpsIP31758_1968 NC_009708.1 Protein Homology CDS 2269978 2271324 . - 0 ID=cds1926;Parent=gene1986;Dbxref=Genbank:WP_002210664.1;Name=WP_002210664.1;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_002210664.1;transl_table=11 NC_009708.1 RefSeq gene 2271631 2272647 . - . ID=gene1987;Name=YPSIP31758_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11155;old_locus_tag=YpsIP31758_1969 NC_009708.1 Protein Homology CDS 2271631 2272647 . - 0 ID=cds1927;Parent=gene1987;Dbxref=Genbank:WP_012105113.1;Name=WP_012105113.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105113.1;transl_table=11 NC_009708.1 RefSeq gene 2273981 2274445 . + . ID=gene1988;Name=YPSIP31758_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11160;old_locus_tag=YpsIP31758_1970 NC_009708.1 Protein Homology CDS 2273981 2274445 . + 0 ID=cds1928;Parent=gene1988;Dbxref=Genbank:WP_012105114.1;Name=WP_012105114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105114.1;transl_table=11 NC_009708.1 RefSeq gene 2274529 2275377 . + . ID=gene1989;Name=YPSIP31758_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11165;old_locus_tag=YpsIP31758_1971 NC_009708.1 Protein Homology CDS 2274529 2275377 . + 0 ID=cds1929;Parent=gene1989;Dbxref=Genbank:WP_012105115.1;Name=WP_012105115.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_012105115.1;transl_table=11 NC_009708.1 RefSeq gene 2275525 2275609 . + . ID=gene1990;Name=YPSIP31758_RS11170;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS11170;old_locus_tag=YpsIP31758_4231 NC_009708.1 tRNAscan-SE tRNA 2275525 2275609 . + . ID=rna57;Parent=gene1990;anticodon=(pos:2275559..2275561);gbkey=tRNA;product=tRNA-Tyr NC_009708.1 tRNAscan-SE exon 2275525 2275609 . + . ID=id194;Parent=rna57;anticodon=(pos:2275559..2275561);gbkey=tRNA;product=tRNA-Tyr NC_009708.1 RefSeq gene 2275675 2275759 . + . ID=gene1991;Name=YPSIP31758_RS11175;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS11175;old_locus_tag=YpsIP31758_4232 NC_009708.1 tRNAscan-SE tRNA 2275675 2275759 . + . ID=rna58;Parent=gene1991;anticodon=(pos:2275709..2275711);gbkey=tRNA;product=tRNA-Tyr NC_009708.1 tRNAscan-SE exon 2275675 2275759 . + . ID=id195;Parent=rna58;anticodon=(pos:2275709..2275711);gbkey=tRNA;product=tRNA-Tyr NC_009708.1 RefSeq gene 2275921 2276781 . - . ID=gene1992;Name=YPSIP31758_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11180;old_locus_tag=YpsIP31758_1974 NC_009708.1 Protein Homology CDS 2275921 2276781 . - 0 ID=cds1930;Parent=gene1992;Dbxref=Genbank:WP_002211665.1;Name=WP_002211665.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211665.1;transl_table=11 NC_009708.1 RefSeq gene 2277591 2278397 . + . ID=gene1993;Name=YPSIP31758_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11185;old_locus_tag=YpsIP31758_1976 NC_009708.1 Protein Homology CDS 2277591 2278397 . + 0 ID=cds1931;Parent=gene1993;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11 NC_009708.1 RefSeq gene 2278495 2278881 . + . ID=gene1994;Name=YPSIP31758_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11190;old_locus_tag=YpsIP31758_1977 NC_009708.1 Protein Homology CDS 2278495 2278881 . + 0 ID=cds1932;Parent=gene1994;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11 NC_009708.1 RefSeq gene 2278894 2279184 . - . ID=gene1995;Name=YPSIP31758_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11195;old_locus_tag=YpsIP31758_1978 NC_009708.1 Protein Homology CDS 2278894 2279184 . - 0 ID=cds1933;Parent=gene1995;Dbxref=Genbank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211669.1;transl_table=11 NC_009708.1 RefSeq gene 2279181 2281106 . - . ID=gene1996;Name=YPSIP31758_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11200;old_locus_tag=YpsIP31758_1979 NC_009708.1 Protein Homology CDS 2279181 2281106 . - 0 ID=cds1934;Parent=gene1996;Dbxref=Genbank:WP_012105118.1;Name=WP_012105118.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_012105118.1;transl_table=11 NC_009708.1 RefSeq gene 2281168 2282214 . - . ID=gene1997;Name=YPSIP31758_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11205;old_locus_tag=YpsIP31758_1980 NC_009708.1 Protein Homology CDS 2281168 2282214 . - 0 ID=cds1935;Parent=gene1997;Dbxref=Genbank:WP_011192432.1;Name=WP_011192432.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_011192432.1;transl_table=11 NC_009708.1 RefSeq gene 2282439 2282990 . - . ID=gene1998;Name=YPSIP31758_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11210;old_locus_tag=YpsIP31758_1981 NC_009708.1 Protein Homology CDS 2282439 2282990 . - 0 ID=cds1936;Parent=gene1998;Dbxref=Genbank:WP_002211673.1;Name=WP_002211673.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211673.1;transl_table=11 NC_009708.1 RefSeq gene 2283153 2285003 . + . ID=gene1999;Name=YPSIP31758_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11215;old_locus_tag=YpsIP31758_1982 NC_009708.1 Protein Homology CDS 2283153 2285003 . + 0 ID=cds1937;Parent=gene1999;Dbxref=Genbank:WP_012105119.1;Name=WP_012105119.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_012105119.1;transl_table=11 NC_009708.1 RefSeq gene 2285120 2286136 . + . ID=gene2000;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11220;old_locus_tag=YpsIP31758_1983 NC_009708.1 Protein Homology CDS 2285120 2286136 . + 0 ID=cds1938;Parent=gene2000;Dbxref=Genbank:WP_011192430.1;Name=WP_011192430.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_011192430.1;transl_table=11 NC_009708.1 RefSeq gene 2286151 2286798 . + . ID=gene2001;Name=YPSIP31758_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11225;old_locus_tag=YpsIP31758_1984 NC_009708.1 Protein Homology CDS 2286151 2286798 . + 0 ID=cds1939;Parent=gene2001;Dbxref=Genbank:WP_012105120.1;Name=WP_012105120.1;gbkey=CDS;product=nicotinamidase/pyrazinamidase;protein_id=WP_012105120.1;transl_table=11 NC_009708.1 RefSeq gene 2286932 2287204 . - . ID=gene2002;Name=YPSIP31758_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11230;old_locus_tag=YpsIP31758_1985 NC_009708.1 Protein Homology CDS 2286932 2287204 . - 0 ID=cds1940;Parent=gene2002;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11 NC_009708.1 RefSeq gene 2287275 2287688 . - . ID=gene2003;Name=YPSIP31758_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11235;old_locus_tag=YpsIP31758_1986 NC_009708.1 Protein Homology CDS 2287275 2287688 . - 0 ID=cds1941;Parent=gene2003;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NC_009708.1 RefSeq gene 2288036 2289031 . + . ID=gene2004;Name=YPSIP31758_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11240;old_locus_tag=YpsIP31758_1987 NC_009708.1 Protein Homology CDS 2288036 2289031 . + 0 ID=cds1942;Parent=gene2004;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NC_009708.1 RefSeq gene 2289346 2290221 . + . ID=gene2005;Name=YPSIP31758_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11245;old_locus_tag=YpsIP31758_1989 NC_009708.1 Protein Homology CDS 2289346 2290221 . + 0 ID=cds1943;Parent=gene2005;Dbxref=Genbank:WP_012105122.1;Name=WP_012105122.1;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;protein_id=WP_012105122.1;transl_table=11 NC_009708.1 RefSeq gene 2290294 2291064 . - . ID=gene2006;Name=YPSIP31758_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11250;old_locus_tag=YpsIP31758_1990 NC_009708.1 Protein Homology CDS 2290294 2291064 . - 0 ID=cds1944;Parent=gene2006;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11 NC_009708.1 RefSeq gene 2291487 2293421 . + . ID=gene2007;Name=YPSIP31758_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11255;old_locus_tag=YpsIP31758_1991 NC_009708.1 Protein Homology CDS 2291487 2293421 . + 0 ID=cds1945;Parent=gene2007;Dbxref=Genbank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_002211681.1;transl_table=11 NC_009708.1 RefSeq gene 2293571 2294845 . + . ID=gene2008;Name=YPSIP31758_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11260;old_locus_tag=YpsIP31758_1992 NC_009708.1 Protein Homology CDS 2293571 2294845 . + 0 ID=cds1946;Parent=gene2008;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11 NC_009708.1 RefSeq gene 2294953 2296071 . + . ID=gene2009;Name=YPSIP31758_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11265;old_locus_tag=YpsIP31758_1993 NC_009708.1 Protein Homology CDS 2294953 2296071 . + 0 ID=cds1947;Parent=gene2009;Dbxref=Genbank:WP_011192428.1;Name=WP_011192428.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192428.1;transl_table=11 NC_009708.1 RefSeq gene 2296106 2297011 . - . ID=gene2010;Name=YPSIP31758_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11270;old_locus_tag=YpsIP31758_1994 NC_009708.1 Protein Homology CDS 2296106 2297011 . - 0 ID=cds1948;Parent=gene2010;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NC_009708.1 RefSeq gene 2297209 2298078 . + . ID=gene2011;Name=YPSIP31758_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11275;old_locus_tag=YpsIP31758_1995 NC_009708.1 Protein Homology CDS 2297209 2298078 . + 0 ID=cds1949;Parent=gene2011;Dbxref=Genbank:WP_002211685.1;Name=WP_002211685.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002211685.1;transl_table=11 NC_009708.1 RefSeq gene 2298343 2299536 . + . ID=gene2012;Name=YPSIP31758_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11280;old_locus_tag=YpsIP31758_1996 NC_009708.1 Protein Homology CDS 2298343 2299536 . + 0 ID=cds1950;Parent=gene2012;Dbxref=Genbank:WP_011192426.1;Name=WP_011192426.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_011192426.1;transl_table=11 NC_009708.1 RefSeq gene 2299565 2300869 . - . ID=gene2013;Name=YPSIP31758_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11285;old_locus_tag=YpsIP31758_1997 NC_009708.1 Protein Homology CDS 2299565 2300869 . - 0 ID=cds1951;Parent=gene2013;Dbxref=Genbank:WP_002211686.1;Name=WP_002211686.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NC_009708.1 RefSeq gene 2301335 2302870 . + . ID=gene2014;Name=YPSIP31758_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11290;old_locus_tag=YpsIP31758_1998 NC_009708.1 Protein Homology CDS 2301335 2302870 . + 0 ID=cds1952;Parent=gene2014;Dbxref=Genbank:WP_011192425.1;Name=WP_011192425.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_011192425.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2302917 2303049 . + . ID=id196;gbkey=repeat_region NC_009708.1 RefSeq gene 2303088 2303807 . - . ID=gene2015;Name=YPSIP31758_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11295;old_locus_tag=YpsIP31758_1999 NC_009708.1 Protein Homology CDS 2303088 2303807 . - 0 ID=cds1953;Parent=gene2015;Dbxref=Genbank:WP_002211688.1;Name=WP_002211688.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_002211688.1;transl_table=11 NC_009708.1 RefSeq gene 2304051 2305625 . + . ID=gene2016;Name=YPSIP31758_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11300;old_locus_tag=YpsIP31758_2000 NC_009708.1 Protein Homology CDS 2304051 2305625 . + 0 ID=cds1954;Parent=gene2016;Dbxref=Genbank:WP_011192424.1;Name=WP_011192424.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_011192424.1;transl_table=11 NC_009708.1 RefSeq gene 2305861 2306391 . + . ID=gene2017;Name=YPSIP31758_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11305;old_locus_tag=YpsIP31758_2001 NC_009708.1 Protein Homology CDS 2305861 2306391 . + 0 ID=cds1955;Parent=gene2017;Dbxref=Genbank:WP_002227934.1;Name=WP_002227934.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_002227934.1;transl_table=11 NC_009708.1 RefSeq gene 2306808 2307164 . - . ID=gene2018;Name=YPSIP31758_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11310;old_locus_tag=YpsIP31758_2002 NC_009708.1 Protein Homology CDS 2306808 2307164 . - 0 ID=cds1956;Parent=gene2018;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NC_009708.1 RefSeq gene 2308256 2308996 . + . ID=gene2019;Name=YPSIP31758_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11315;old_locus_tag=YpsIP31758_2003 NC_009708.1 Protein Homology CDS 2308256 2308996 . + 0 ID=cds1957;Parent=gene2019;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NC_009708.1 RefSeq gene 2309013 2310212 . + . ID=gene2020;Name=YPSIP31758_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11320;old_locus_tag=YpsIP31758_2004 NC_009708.1 Protein Homology CDS 2309013 2310212 . + 0 ID=cds1958;Parent=gene2020;Dbxref=Genbank:WP_012105123.1;Name=WP_012105123.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_012105123.1;transl_table=11 NC_009708.1 RefSeq gene 2310216 2311388 . + . ID=gene2021;Name=YPSIP31758_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11325;old_locus_tag=YpsIP31758_2005 NC_009708.1 Protein Homology CDS 2310216 2311388 . + 0 ID=cds1959;Parent=gene2021;Dbxref=Genbank:WP_002214492.1;Name=WP_002214492.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NC_009708.1 RefSeq gene 2311473 2311919 . - . ID=gene2022;Name=YPSIP31758_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11330;old_locus_tag=YpsIP31758_2006 NC_009708.1 Protein Homology CDS 2311473 2311919 . - 0 ID=cds1960;Parent=gene2022;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11 NC_009708.1 RefSeq gene 2312022 2312678 . - . ID=gene2023;Name=YPSIP31758_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11335;old_locus_tag=YpsIP31758_2007 NC_009708.1 Protein Homology CDS 2312022 2312678 . - 0 ID=cds1961;Parent=gene2023;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11 NC_009708.1 RefSeq gene 2312749 2313834 . - . ID=gene2024;Name=YPSIP31758_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11340;old_locus_tag=YpsIP31758_2008 NC_009708.1 Protein Homology CDS 2312749 2313834 . - 0 ID=cds1962;Parent=gene2024;Dbxref=Genbank:WP_011192421.1;Name=WP_011192421.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192421.1;transl_table=11 NC_009708.1 RefSeq gene 2313975 2314247 . - . ID=gene2025;Name=YPSIP31758_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11345;old_locus_tag=YpsIP31758_2009 NC_009708.1 Protein Homology CDS 2313975 2314247 . - 0 ID=cds1963;Parent=gene2025;Dbxref=Genbank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211743.1;transl_table=11 NC_009708.1 RefSeq gene 2314968 2315654 . + . ID=gene2026;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11350;old_locus_tag=YpsIP31758_2010 NC_009708.1 Protein Homology CDS 2314968 2315654 . + 0 ID=cds1964;Parent=gene2026;Dbxref=Genbank:WP_002220631.1;Name=WP_002220631.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11 NC_009708.1 RefSeq gene 2315679 2316491 . + . ID=gene2027;Name=YPSIP31758_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11355;old_locus_tag=YpsIP31758_2011 NC_009708.1 Protein Homology CDS 2315679 2316491 . + 0 ID=cds1965;Parent=gene2027;Dbxref=Genbank:WP_002211179.1;Name=WP_002211179.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_002211179.1;transl_table=11 NC_009708.1 RefSeq gene 2316495 2316764 . + . ID=gene2028;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11360;old_locus_tag=YpsIP31758_2012 NC_009708.1 Protein Homology CDS 2316495 2316764 . + 0 ID=cds1966;Parent=gene2028;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11 NC_009708.1 RefSeq gene 2317001 2318122 . - . ID=gene2029;Name=YPSIP31758_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11365;old_locus_tag=YpsIP31758_2013 NC_009708.1 Protein Homology CDS 2317001 2318122 . - 0 ID=cds1967;Parent=gene2029;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NC_009708.1 RefSeq gene 2318282 2319970 . - . ID=gene2030;Name=YPSIP31758_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11370;old_locus_tag=YpsIP31758_2014 NC_009708.1 Protein Homology CDS 2318282 2319970 . - 0 ID=cds1968;Parent=gene2030;Dbxref=Genbank:WP_002220632.1;Name=WP_002220632.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002220632.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2320461 2320577 . + . ID=id197;gbkey=repeat_region NC_009708.1 RefSeq gene 2320613 2321218 . - . ID=gene2031;Name=YPSIP31758_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11375;old_locus_tag=YpsIP31758_2015 NC_009708.1 Protein Homology CDS 2320613 2321218 . - 0 ID=cds1969;Parent=gene2031;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11 NC_009708.1 RefSeq gene 2321355 2322053 . - . ID=gene2032;Name=YPSIP31758_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11380;old_locus_tag=YpsIP31758_2016 NC_009708.1 Protein Homology CDS 2321355 2322053 . - 0 ID=cds1970;Parent=gene2032;Dbxref=Genbank:WP_002211184.1;Name=WP_002211184.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_002211184.1;transl_table=11 NC_009708.1 RefSeq gene 2322125 2324029 . - . ID=gene2033;Name=YPSIP31758_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11385;old_locus_tag=YpsIP31758_2017 NC_009708.1 Protein Homology CDS 2322125 2324029 . - 0 ID=cds1971;Parent=gene2033;Dbxref=Genbank:WP_011192419.1;Name=WP_011192419.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_011192419.1;transl_table=11 NC_009708.1 RefSeq gene 2324160 2324504 . + . ID=gene2034;Name=YPSIP31758_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11390;old_locus_tag=YpsIP31758_2018 NC_009708.1 Protein Homology CDS 2324160 2324504 . + 0 ID=cds1972;Parent=gene2034;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11 NC_009708.1 RefSeq gene 2324636 2324965 . - . ID=gene2035;Name=YPSIP31758_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11395;old_locus_tag=YpsIP31758_2019 NC_009708.1 Protein Homology CDS 2324636 2324965 . - 0 ID=cds1973;Parent=gene2035;Dbxref=Genbank:WP_002211187.1;Name=WP_002211187.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_002211187.1;transl_table=11 NC_009708.1 RefSeq gene 2324952 2325395 . - . ID=gene2036;Name=YPSIP31758_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11400;old_locus_tag=YpsIP31758_2020 NC_009708.1 Protein Homology CDS 2324952 2325395 . - 0 ID=cds1974;Parent=gene2036;Dbxref=Genbank:WP_012105125.1;Name=WP_012105125.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_012105125.1;transl_table=11 NC_009708.1 RefSeq gene 2326083 2326724 . - . ID=gene2037;Name=YPSIP31758_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11405;old_locus_tag=YpsIP31758_2021 NC_009708.1 Protein Homology CDS 2326083 2326724 . - 0 ID=cds1975;Parent=gene2037;Dbxref=Genbank:WP_012105126.1;Name=WP_012105126.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_012105126.1;transl_table=11 NC_009708.1 RefSeq gene 2326731 2326922 . - . ID=gene2038;Name=YPSIP31758_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11410 NC_009708.1 Protein Homology CDS 2326731 2326922 . - 0 ID=cds1976;Parent=gene2038;Dbxref=Genbank:WP_002216963.1;Name=WP_002216963.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216963.1;transl_table=11 NC_009708.1 RefSeq gene 2326966 2328450 . - . ID=gene2039;Name=YPSIP31758_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11415;old_locus_tag=YpsIP31758_2022 NC_009708.1 Protein Homology CDS 2326966 2328450 . - 0 ID=cds1977;Parent=gene2039;Dbxref=Genbank:WP_011906215.1;Name=WP_011906215.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_011906215.1;transl_table=11 NC_009708.1 RefSeq gene 2328803 2329672 . + . ID=gene2040;Name=YPSIP31758_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11420;old_locus_tag=YpsIP31758_2023 NC_009708.1 Protein Homology CDS 2328803 2329672 . + 0 ID=cds1978;Parent=gene2040;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NC_009708.1 RefSeq gene 2330002 2331444 . + . ID=gene2041;Name=YPSIP31758_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11425;old_locus_tag=YpsIP31758_2024 NC_009708.1 Protein Homology CDS 2330002 2331444 . + 0 ID=cds1979;Parent=gene2041;Dbxref=Genbank:WP_002211193.1;Name=WP_002211193.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2331492 2331666 . + . ID=id198;gbkey=repeat_region NC_009708.1 RefSeq gene 2331784 2332746 . - . ID=gene2042;Name=YPSIP31758_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11430;old_locus_tag=YpsIP31758_2025 NC_009708.1 Protein Homology CDS 2331784 2332746 . - 0 ID=cds1980;Parent=gene2042;Dbxref=Genbank:WP_002211194.1;Name=WP_002211194.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_002211194.1;transl_table=11 NC_009708.1 RefSeq gene 2333013 2334329 . - . ID=gene2043;Name=YPSIP31758_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11435;old_locus_tag=YpsIP31758_2026 NC_009708.1 Protein Homology CDS 2333013 2334329 . - 0 ID=cds1981;Parent=gene2043;Dbxref=Genbank:WP_002228437.1;Name=WP_002228437.1;gbkey=CDS;product=peptidase;protein_id=WP_002228437.1;transl_table=11 NC_009708.1 RefSeq gene 2334350 2335306 . - . ID=gene2044;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=YPSIP31758_RS11440;old_locus_tag=YpsIP31758_2027 NC_009708.1 Protein Homology CDS 2334350 2335306 . - 0 ID=cds1982;Parent=gene2044;Dbxref=Genbank:WP_002227944.1;Name=WP_002227944.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_002227944.1;transl_table=11 NC_009708.1 RefSeq gene 2335382 2336140 . + . ID=gene2045;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=YPSIP31758_RS11445;old_locus_tag=YpsIP31758_2028 NC_009708.1 Protein Homology CDS 2335382 2336140 . + 0 ID=cds1983;Parent=gene2045;Dbxref=Genbank:WP_002228434.1;Name=WP_002228434.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_002228434.1;transl_table=11 NC_009708.1 RefSeq gene 2336137 2336922 . + . ID=gene2046;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=YPSIP31758_RS11450;old_locus_tag=YpsIP31758_2029 NC_009708.1 Protein Homology CDS 2336137 2336922 . + 0 ID=cds1984;Parent=gene2046;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11 NC_009708.1 RefSeq gene 2336978 2337982 . - . ID=gene2047;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11455;old_locus_tag=YpsIP31758_2030 NC_009708.1 Protein Homology CDS 2336978 2337982 . - 0 ID=cds1985;Parent=gene2047;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NC_009708.1 RefSeq gene 2338145 2338759 . - . ID=gene2048;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11460;old_locus_tag=YpsIP31758_2031 NC_009708.1 Protein Homology CDS 2338145 2338759 . - 0 ID=cds1986;Parent=gene2048;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11 NC_009708.1 RefSeq gene 2339066 2339587 . - . ID=gene2049;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11465;old_locus_tag=YpsIP31758_2032 NC_009708.1 Protein Homology CDS 2339066 2339587 . - 0 ID=cds1987;Parent=gene2049;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NC_009708.1 RefSeq gene 2339796 2340539 . - . ID=gene2050;Name=YPSIP31758_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11470;old_locus_tag=YpsIP31758_2033 NC_009708.1 Protein Homology CDS 2339796 2340539 . - 0 ID=cds1988;Parent=gene2050;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NC_009708.1 RefSeq gene 2340597 2341040 . - . ID=gene2051;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11475;old_locus_tag=YpsIP31758_2034 NC_009708.1 Protein Homology CDS 2340597 2341040 . - 0 ID=cds1989;Parent=gene2051;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11 NC_009708.1 RefSeq gene 2341040 2342836 . - . ID=gene2052;Name=YPSIP31758_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11480;old_locus_tag=YpsIP31758_2035 NC_009708.1 Protein Homology CDS 2341040 2342836 . - 0 ID=cds1990;Parent=gene2052;Dbxref=Genbank:WP_002211204.1;Name=WP_002211204.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2343457 2343798 . + . ID=id199;gbkey=repeat_region NC_009708.1 RefSeq gene 2343805 2344620 . + . ID=gene2053;Name=YPSIP31758_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11485;old_locus_tag=YpsIP31758_2036 NC_009708.1 Protein Homology CDS 2343805 2344620 . + 0 ID=cds1991;Parent=gene2053;Dbxref=Genbank:WP_012105129.1;Name=WP_012105129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105129.1;transl_table=11 NC_009708.1 RefSeq gene 2344800 2345195 . + . ID=gene2054;Name=YPSIP31758_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11490;old_locus_tag=YpsIP31758_2037 NC_009708.1 Protein Homology CDS 2344800 2345195 . + 0 ID=cds1992;Parent=gene2054;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11 NC_009708.1 RefSeq gene 2345386 2346189 . + . ID=gene2055;Name=YPSIP31758_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11495;old_locus_tag=YpsIP31758_2038 NC_009708.1 Protein Homology CDS 2345386 2346189 . + 0 ID=cds1993;Parent=gene2055;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11 NC_009708.1 RefSeq gene 2346186 2347157 . + . ID=gene2056;Name=YPSIP31758_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11500;old_locus_tag=YpsIP31758_2039 NC_009708.1 Protein Homology CDS 2346186 2347157 . + 0 ID=cds1994;Parent=gene2056;Dbxref=Genbank:WP_012105130.1;Name=WP_012105130.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_012105130.1;transl_table=11 NC_009708.1 RefSeq gene 2347350 2348114 . - . ID=gene2057;Name=YPSIP31758_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11505;old_locus_tag=YpsIP31758_2040 NC_009708.1 Protein Homology CDS 2347350 2348114 . - 0 ID=cds1995;Parent=gene2057;Dbxref=Genbank:WP_012105131.1;Name=WP_012105131.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_012105131.1;transl_table=11 NC_009708.1 RefSeq gene 2348346 2348921 . - . ID=gene2058;Name=YPSIP31758_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11510;old_locus_tag=YpsIP31758_2041 NC_009708.1 Protein Homology CDS 2348346 2348921 . - 0 ID=cds1996;Parent=gene2058;Dbxref=Genbank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211210.1;transl_table=11 NC_009708.1 RefSeq gene 2349486 2351216 . + . ID=gene2059;Name=YPSIP31758_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11515;old_locus_tag=YpsIP31758_2043 NC_009708.1 Protein Homology CDS 2349486 2351216 . + 0 ID=cds1997;Parent=gene2059;Dbxref=Genbank:WP_012105133.1;Name=WP_012105133.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_012105133.1;transl_table=11 NC_009708.1 RefSeq gene 2351366 2356093 . - . ID=gene2060;Name=YPSIP31758_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11520;old_locus_tag=YpsIP31758_2044 NC_009708.1 Protein Homology CDS 2351366 2356093 . - 0 ID=cds1998;Parent=gene2060;Dbxref=Genbank:WP_041175861.1;Name=WP_041175861.1;gbkey=CDS;product=hemolysin;protein_id=WP_041175861.1;transl_table=11 NC_009708.1 RefSeq gene 2356255 2357916 . - . ID=gene2061;Name=YPSIP31758_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11525;old_locus_tag=YpsIP31758_2045 NC_009708.1 Protein Homology CDS 2356255 2357916 . - 0 ID=cds1999;Parent=gene2061;Dbxref=Genbank:WP_041175764.1;Name=WP_041175764.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_041175764.1;transl_table=11 NC_009708.1 RefSeq gene 2358289 2359824 . - . ID=gene2062;Name=YPSIP31758_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11530;old_locus_tag=YpsIP31758_2046 NC_009708.1 Protein Homology CDS 2358289 2359824 . - 0 ID=cds2000;Parent=gene2062;Dbxref=Genbank:WP_012105136.1;Name=WP_012105136.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105136.1;transl_table=11 NC_009708.1 RefSeq gene 2360091 2361020 . - . ID=gene2063;Name=YPSIP31758_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11535;old_locus_tag=YpsIP31758_2047 NC_009708.1 Protein Homology CDS 2360091 2361020 . - 0 ID=cds2001;Parent=gene2063;Dbxref=Genbank:WP_012105137.1;Name=WP_012105137.1;gbkey=CDS;product=virulence factor MviM;protein_id=WP_012105137.1;transl_table=11 NC_009708.1 RefSeq gene 2361013 2361714 . - . ID=gene2064;Name=YPSIP31758_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11540;old_locus_tag=YpsIP31758_2048 NC_009708.1 Protein Homology CDS 2361013 2361714 . - 0 ID=cds2002;Parent=gene2064;Dbxref=Genbank:WP_011192403.1;Name=WP_011192403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192403.1;transl_table=11 NC_009708.1 RefSeq gene 2361722 2362306 . - . ID=gene2065;Name=YPSIP31758_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11545;old_locus_tag=YpsIP31758_2049 NC_009708.1 Protein Homology CDS 2361722 2362306 . - 0 ID=cds2003;Parent=gene2065;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NC_009708.1 RefSeq gene 2362600 2363805 . + . ID=gene2066;Name=YPSIP31758_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11550;old_locus_tag=YpsIP31758_2050 NC_009708.1 Protein Homology CDS 2362600 2363805 . + 0 ID=cds2004;Parent=gene2066;Dbxref=Genbank:WP_002211217.1;Name=WP_002211217.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_002211217.1;transl_table=11 NC_009708.1 RefSeq gene 2364222 2364785 . + . ID=gene2067;Name=YPSIP31758_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11555;old_locus_tag=YpsIP31758_2051 NC_009708.1 Protein Homology CDS 2364222 2364785 . + 0 ID=cds2005;Parent=gene2067;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2364859 2365185 . + . ID=id200;gbkey=repeat_region NC_009708.1 RefSeq gene 2365239 2365799 . - . ID=gene2068;Name=YPSIP31758_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11560;old_locus_tag=YpsIP31758_2052 NC_009708.1 Protein Homology CDS 2365239 2365799 . - 0 ID=cds2006;Parent=gene2068;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NC_009708.1 RefSeq gene 2365836 2366573 . - . ID=gene2069;Name=YPSIP31758_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11565;old_locus_tag=YpsIP31758_2053 NC_009708.1 Protein Homology CDS 2365836 2366573 . - 0 ID=cds2007;Parent=gene2069;Dbxref=Genbank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NC_009708.1 RefSeq gene 2366862 2366951 . + . ID=gene2070;Name=YPSIP31758_RS11570;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS11570;old_locus_tag=YpsIP31758_4233 NC_009708.1 tRNAscan-SE tRNA 2366862 2366951 . + . ID=rna59;Parent=gene2070;anticodon=(pos:2366896..2366898);gbkey=tRNA;product=tRNA-Ser NC_009708.1 tRNAscan-SE exon 2366862 2366951 . + . ID=id201;Parent=rna59;anticodon=(pos:2366896..2366898);gbkey=tRNA;product=tRNA-Ser NC_009708.1 RefSeq gene 2367158 2368270 . - . ID=gene2071;Name=YPSIP31758_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11575;old_locus_tag=YpsIP31758_2054 NC_009708.1 Protein Homology CDS 2367158 2368270 . - 0 ID=cds2008;Parent=gene2071;Dbxref=Genbank:WP_002211222.1;Name=WP_002211222.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NC_009708.1 RefSeq gene 2368284 2369114 . - . ID=gene2072;Name=YPSIP31758_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11580;old_locus_tag=YpsIP31758_2055 NC_009708.1 Protein Homology CDS 2368284 2369114 . - 0 ID=cds2009;Parent=gene2072;Dbxref=Genbank:WP_002211223.1;Name=WP_002211223.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11 NC_009708.1 RefSeq gene 2369328 2370395 . + . ID=gene2073;Name=YPSIP31758_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11585;old_locus_tag=YpsIP31758_2056 NC_009708.1 Protein Homology CDS 2369328 2370395 . + 0 ID=cds2010;Parent=gene2073;Dbxref=Genbank:WP_012105138.1;Name=WP_012105138.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_012105138.1;transl_table=11 NC_009708.1 RefSeq gene 2370392 2371258 . + . ID=gene2074;Name=YPSIP31758_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11590;old_locus_tag=YpsIP31758_2057 NC_009708.1 Protein Homology CDS 2370392 2371258 . + 0 ID=cds2011;Parent=gene2074;Dbxref=Genbank:WP_012105139.1;Name=WP_012105139.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_012105139.1;transl_table=11 NC_009708.1 RefSeq gene 2371255 2372091 . + . ID=gene2075;Name=YPSIP31758_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11595;old_locus_tag=YpsIP31758_2058 NC_009708.1 Protein Homology CDS 2371255 2372091 . + 0 ID=cds2012;Parent=gene2075;Dbxref=Genbank:WP_002211227.1;Name=WP_002211227.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NC_009708.1 RefSeq gene 2372111 2373193 . + . ID=gene2076;Name=YPSIP31758_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11600;old_locus_tag=YpsIP31758_2059 NC_009708.1 Protein Homology CDS 2372111 2373193 . + 0 ID=cds2013;Parent=gene2076;Dbxref=Genbank:WP_012105140.1;Name=WP_012105140.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012105140.1;transl_table=11 NC_009708.1 RefSeq gene 2373494 2374369 . + . ID=gene2077;Name=YPSIP31758_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11605;old_locus_tag=YpsIP31758_2060 NC_009708.1 Protein Homology CDS 2373494 2374369 . + 0 ID=cds2014;Parent=gene2077;Dbxref=Genbank:WP_002211229.1;Name=WP_002211229.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211229.1;transl_table=11 NC_009708.1 RefSeq gene 2374511 2374600 . + . ID=gene2078;Name=YPSIP31758_RS11610;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS11610;old_locus_tag=YpsIP31758_4234 NC_009708.1 tRNAscan-SE tRNA 2374511 2374600 . + . ID=rna60;Parent=gene2078;anticodon=(pos:2374545..2374547);gbkey=tRNA;product=tRNA-Ser NC_009708.1 tRNAscan-SE exon 2374511 2374600 . + . ID=id202;Parent=rna60;anticodon=(pos:2374545..2374547);gbkey=tRNA;product=tRNA-Ser NC_009708.1 RefSeq gene 2374928 2375205 . + . ID=gene2079;Name=YPSIP31758_RS11615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS11615;pseudo=true NC_009708.1 Protein Homology CDS 2374928 2375205 . + 0 ID=cds2015;Parent=gene2079;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2375444 2377141 . + . ID=gene2080;Name=YPSIP31758_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11620;old_locus_tag=YpsIP31758_2061 NC_009708.1 Protein Homology CDS 2375444 2377141 . + 0 ID=cds2016;Parent=gene2080;Dbxref=Genbank:WP_012105141.1;Name=WP_012105141.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_012105141.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2377182 2377355 . + . ID=id203;gbkey=repeat_region NC_009708.1 RefSeq gene 2377494 2378348 . - . ID=gene2081;Name=YPSIP31758_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11625;old_locus_tag=YpsIP31758_2062 NC_009708.1 Protein Homology CDS 2377494 2378348 . - 0 ID=cds2017;Parent=gene2081;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11 NC_009708.1 RefSeq gene 2378444 2379253 . - . ID=gene2082;Name=YPSIP31758_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11630;old_locus_tag=YpsIP31758_2063 NC_009708.1 Protein Homology CDS 2378444 2379253 . - 0 ID=cds2018;Parent=gene2082;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11 NC_009708.1 RefSeq gene 2379250 2379651 . - . ID=gene2083;Name=YPSIP31758_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11635;old_locus_tag=YpsIP31758_2064 NC_009708.1 Protein Homology CDS 2379250 2379651 . - 0 ID=cds2019;Parent=gene2083;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11 NC_009708.1 RefSeq gene 2379715 2380545 . - . ID=gene2084;Name=YPSIP31758_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11640;old_locus_tag=YpsIP31758_2065 NC_009708.1 Protein Homology CDS 2379715 2380545 . - 0 ID=cds2020;Parent=gene2084;Dbxref=Genbank:WP_012105142.1;Name=WP_012105142.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_012105142.1;transl_table=11 NC_009708.1 RefSeq gene 2380545 2381627 . - . ID=gene2085;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11645;old_locus_tag=YpsIP31758_2066 NC_009708.1 Protein Homology CDS 2380545 2381627 . - 0 ID=cds2021;Parent=gene2085;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NC_009708.1 RefSeq gene 2381660 2382922 . - . ID=gene2086;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11650;old_locus_tag=YpsIP31758_2067 NC_009708.1 Protein Homology CDS 2381660 2382922 . - 0 ID=cds2022;Parent=gene2086;Dbxref=Genbank:WP_002211237.1;Name=WP_002211237.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NC_009708.1 RefSeq gene 2383228 2383851 . + . ID=gene2087;Name=YPSIP31758_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11655;old_locus_tag=YpsIP31758_2068 NC_009708.1 Protein Homology CDS 2383228 2383851 . + 0 ID=cds2023;Parent=gene2087;Dbxref=Genbank:WP_012105143.1;Name=WP_012105143.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_012105143.1;transl_table=11 NC_009708.1 RefSeq gene 2383853 2384752 . + . ID=gene2088;Name=YPSIP31758_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11660;old_locus_tag=YpsIP31758_2069 NC_009708.1 Protein Homology CDS 2383853 2384752 . + 0 ID=cds2024;Parent=gene2088;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NC_009708.1 RefSeq gene 2384933 2385043 . + . ID=gene2089;Name=YPSIP31758_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11665 NC_009708.1 Protein Homology CDS 2384933 2385043 . + 0 ID=cds2025;Parent=gene2089;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11 NC_009708.1 RefSeq gene 2385093 2386040 . + . ID=gene2090;Name=YPSIP31758_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11670;old_locus_tag=YpsIP31758_2070 NC_009708.1 Protein Homology CDS 2385093 2386040 . + 0 ID=cds2026;Parent=gene2090;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11 NC_009708.1 RefSeq gene 2386138 2386251 . + . ID=gene2091;Name=YPSIP31758_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11675;old_locus_tag=YpsIP31758_2072 NC_009708.1 Protein Homology CDS 2386138 2386251 . + 0 ID=cds2027;Parent=gene2091;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11 NC_009708.1 RefSeq gene 2386242 2386514 . - . ID=gene2092;Name=YPSIP31758_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11680;old_locus_tag=YpsIP31758_2071 NC_009708.1 Protein Homology CDS 2386242 2386514 . - 0 ID=cds2028;Parent=gene2092;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11 NC_009708.1 RefSeq gene 2386876 2387466 . + . ID=gene2093;Name=YPSIP31758_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11685;old_locus_tag=YpsIP31758_2074 NC_009708.1 Protein Homology CDS 2386876 2387466 . + 0 ID=cds2029;Parent=gene2093;Dbxref=Genbank:WP_012105144.1;Name=WP_012105144.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_012105144.1;transl_table=11 NC_009708.1 RefSeq gene 2387631 2388722 . + . ID=gene2094;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11690;old_locus_tag=YpsIP31758_2075 NC_009708.1 Protein Homology CDS 2387631 2388722 . + 0 ID=cds2030;Parent=gene2094;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11 NC_009708.1 RefSeq gene 2388935 2389333 . + . ID=gene2095;Name=YPSIP31758_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11695;old_locus_tag=YpsIP31758_2076 NC_009708.1 Protein Homology CDS 2388935 2389333 . + 0 ID=cds2031;Parent=gene2095;Dbxref=Genbank:WP_011906219.1;Name=WP_011906219.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011906219.1;transl_table=11 NC_009708.1 RefSeq gene 2389351 2389860 . + . ID=gene2096;Name=YPSIP31758_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11700;old_locus_tag=YpsIP31758_2077 NC_009708.1 Protein Homology CDS 2389351 2389860 . + 0 ID=cds2032;Parent=gene2096;Dbxref=Genbank:WP_012105145.1;Name=WP_012105145.1;gbkey=CDS;product=integrase;protein_id=WP_012105145.1;transl_table=11 NC_009708.1 RefSeq gene 2389908 2390306 . - . ID=gene2097;Name=YPSIP31758_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11705;old_locus_tag=YpsIP31758_2078 NC_009708.1 Protein Homology CDS 2389908 2390306 . - 0 ID=cds2033;Parent=gene2097;Dbxref=Genbank:WP_012105146.1;Name=WP_012105146.1;gbkey=CDS;product=rhodanese;protein_id=WP_012105146.1;transl_table=11 NC_009708.1 RefSeq gene 2390314 2391210 . - . ID=gene2098;Name=YPSIP31758_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11710;old_locus_tag=YpsIP31758_2079 NC_009708.1 Protein Homology CDS 2390314 2391210 . - 0 ID=cds2034;Parent=gene2098;Dbxref=Genbank:WP_012105147.1;Name=WP_012105147.1;gbkey=CDS;product=esterase;protein_id=WP_012105147.1;transl_table=11 NC_009708.1 RefSeq gene 2391207 2391863 . - . ID=gene2099;Name=YPSIP31758_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11715;old_locus_tag=YpsIP31758_2080 NC_009708.1 Protein Homology CDS 2391207 2391863 . - 0 ID=cds2035;Parent=gene2099;Dbxref=Genbank:WP_041175765.1;Name=WP_041175765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175765.1;transl_table=11 NC_009708.1 RefSeq gene 2392066 2392449 . - . ID=gene2100;Name=YPSIP31758_RS11720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS11720;old_locus_tag=YpsIP31758_2081;partial=true;pseudo=true;start_range=.,2392066 NC_009708.1 Protein Homology CDS 2392066 2392449 . - 0 ID=cds2036;Parent=gene2100;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=flavodoxin;pseudo=true;start_range=.,2392066;transl_table=11 NC_009708.1 RefSeq gene 2392640 2393731 . - . ID=gene2101;Name=YPSIP31758_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11725;old_locus_tag=YpsIP31758_2082 NC_009708.1 Protein Homology CDS 2392640 2393731 . - 0 ID=cds2037;Parent=gene2101;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11 NC_009708.1 RefSeq gene 2393996 2394688 . + . ID=gene2102;Name=YPSIP31758_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11730;old_locus_tag=YpsIP31758_2084 NC_009708.1 Protein Homology CDS 2393996 2394688 . + 0 ID=cds2038;Parent=gene2102;Dbxref=Genbank:WP_012105151.1;Name=WP_012105151.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_012105151.1;transl_table=11 NC_009708.1 RefSeq gene 2394700 2396085 . + . ID=gene2103;Name=YPSIP31758_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11735;old_locus_tag=YpsIP31758_2085 NC_009708.1 Protein Homology CDS 2394700 2396085 . + 0 ID=cds2039;Parent=gene2103;Dbxref=Genbank:WP_012105152.1;Name=WP_012105152.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_012105152.1;transl_table=11 NC_009708.1 RefSeq gene 2396362 2396784 . + . ID=gene2104;Name=YPSIP31758_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11740;old_locus_tag=YpsIP31758_2086 NC_009708.1 Protein Homology CDS 2396362 2396784 . + 0 ID=cds2040;Parent=gene2104;Dbxref=Genbank:WP_002211255.1;Name=WP_002211255.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002211255.1;transl_table=11 NC_009708.1 RefSeq gene 2396839 2397309 . + . ID=gene2105;Name=YPSIP31758_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11745;old_locus_tag=YpsIP31758_2087 NC_009708.1 Protein Homology CDS 2396839 2397309 . + 0 ID=cds2041;Parent=gene2105;Dbxref=Genbank:WP_002211256.1;Name=WP_002211256.1;gbkey=CDS;product=cupin;protein_id=WP_002211256.1;transl_table=11 NC_009708.1 RefSeq gene 2397522 2398595 . + . ID=gene2106;Name=YPSIP31758_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11750;old_locus_tag=YpsIP31758_2089 NC_009708.1 Protein Homology CDS 2397522 2398595 . + 0 ID=cds2042;Parent=gene2106;Dbxref=Genbank:WP_002211257.1;Name=WP_002211257.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11 NC_009708.1 RefSeq gene 2399387 2400292 . + . ID=gene2107;Name=YPSIP31758_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11755;old_locus_tag=YpsIP31758_2090 NC_009708.1 Protein Homology CDS 2399387 2400292 . + 0 ID=cds2043;Parent=gene2107;Dbxref=Genbank:WP_012105154.1;Name=WP_012105154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105154.1;transl_table=11 NC_009708.1 RefSeq gene 2400298 2401230 . + . ID=gene2108;Name=YPSIP31758_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11760;old_locus_tag=YpsIP31758_2091 NC_009708.1 Protein Homology CDS 2400298 2401230 . + 0 ID=cds2044;Parent=gene2108;Dbxref=Genbank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NC_009708.1 RefSeq gene 2401217 2402167 . + . ID=gene2109;Name=YPSIP31758_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11765;old_locus_tag=YpsIP31758_2092 NC_009708.1 Protein Homology CDS 2401217 2402167 . + 0 ID=cds2045;Parent=gene2109;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NC_009708.1 RefSeq gene 2402508 2403188 . + . ID=gene2110;Name=YPSIP31758_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11770;old_locus_tag=YpsIP31758_2093 NC_009708.1 Protein Homology CDS 2402508 2403188 . + 0 ID=cds2046;Parent=gene2110;Dbxref=Genbank:WP_002211261.1;Name=WP_002211261.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211261.1;transl_table=11 NC_009708.1 RefSeq gene 2403293 2403952 . + . ID=gene2111;Name=YPSIP31758_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11775;old_locus_tag=YpsIP31758_2094 NC_009708.1 Protein Homology CDS 2403293 2403952 . + 0 ID=cds2047;Parent=gene2111;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11 NC_009708.1 RefSeq gene 2404087 2404725 . - . ID=gene2112;Name=YPSIP31758_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11780;old_locus_tag=YpsIP31758_2095 NC_009708.1 Protein Homology CDS 2404087 2404725 . - 0 ID=cds2048;Parent=gene2112;Dbxref=Genbank:WP_002211263.1;Name=WP_002211263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211263.1;transl_table=11 NC_009708.1 RefSeq gene 2404781 2404969 . + . ID=gene2113;Name=YPSIP31758_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11785 NC_009708.1 Protein Homology CDS 2404781 2404969 . + 0 ID=cds2049;Parent=gene2113;Dbxref=Genbank:WP_002211264.1;Name=WP_002211264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211264.1;transl_table=11 NC_009708.1 RefSeq gene 2404972 2407083 . - . ID=gene2114;Name=YPSIP31758_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11790;old_locus_tag=YpsIP31758_2096 NC_009708.1 Protein Homology CDS 2404972 2407083 . - 0 ID=cds2050;Parent=gene2114;Dbxref=Genbank:WP_012105156.1;Name=WP_012105156.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105156.1;transl_table=11 NC_009708.1 RefSeq gene 2407661 2409823 . + . ID=gene2115;Name=YPSIP31758_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11795;old_locus_tag=YpsIP31758_2097 NC_009708.1 Protein Homology CDS 2407661 2409823 . + 0 ID=cds2051;Parent=gene2115;Dbxref=Genbank:WP_012105157.1;Name=WP_012105157.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105157.1;transl_table=11 NC_009708.1 RefSeq gene 2409947 2411605 . + . ID=gene2116;Name=YPSIP31758_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11800;old_locus_tag=YpsIP31758_2098 NC_009708.1 Protein Homology CDS 2409947 2411605 . + 0 ID=cds2052;Parent=gene2116;Dbxref=Genbank:WP_041175862.1;Name=WP_041175862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175862.1;transl_table=11 NC_009708.1 RefSeq gene 2411775 2412239 . + . ID=gene2117;Name=YPSIP31758_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11805;old_locus_tag=YpsIP31758_2099 NC_009708.1 Protein Homology CDS 2411775 2412239 . + 0 ID=cds2053;Parent=gene2117;Dbxref=Genbank:WP_002211268.1;Name=WP_002211268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211268.1;transl_table=11 NC_009708.1 RefSeq gene 2412400 2413587 . - . ID=gene2118;Name=YPSIP31758_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11810;old_locus_tag=YpsIP31758_2100 NC_009708.1 Protein Homology CDS 2412400 2413587 . - 0 ID=cds2054;Parent=gene2118;Dbxref=Genbank:WP_012105159.1;Name=WP_012105159.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_012105159.1;transl_table=11 NC_009708.1 RefSeq gene 2413584 2414168 . - . ID=gene2119;Name=YPSIP31758_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11815;old_locus_tag=YpsIP31758_2101 NC_009708.1 Protein Homology CDS 2413584 2414168 . - 0 ID=cds2055;Parent=gene2119;Dbxref=Genbank:WP_012105160.1;Name=WP_012105160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105160.1;transl_table=11 NC_009708.1 RefSeq gene 2414165 2415319 . - . ID=gene2120;Name=YPSIP31758_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11820;old_locus_tag=YpsIP31758_2102 NC_009708.1 Protein Homology CDS 2414165 2415319 . - 0 ID=cds2056;Parent=gene2120;Dbxref=Genbank:WP_012105161.1;Name=WP_012105161.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_012105161.1;transl_table=11 NC_009708.1 RefSeq gene 2415319 2416281 . - . ID=gene2121;Name=YPSIP31758_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11825;old_locus_tag=YpsIP31758_2103 NC_009708.1 Protein Homology CDS 2415319 2416281 . - 0 ID=cds2057;Parent=gene2121;Dbxref=Genbank:WP_012105162.1;Name=WP_012105162.1;gbkey=CDS;product=NAD(P)H steroid dehydrogenase;protein_id=WP_012105162.1;transl_table=11 NC_009708.1 RefSeq gene 2416415 2417701 . - . ID=gene2122;Name=YPSIP31758_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11830;old_locus_tag=YpsIP31758_2104 NC_009708.1 Protein Homology CDS 2416415 2417701 . - 0 ID=cds2058;Parent=gene2122;Dbxref=Genbank:WP_012105163.1;Name=WP_012105163.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_012105163.1;transl_table=11 NC_009708.1 RefSeq gene 2417698 2418504 . - . ID=gene2123;Name=YPSIP31758_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11835;old_locus_tag=YpsIP31758_2106 NC_009708.1 Protein Homology CDS 2417698 2418504 . - 0 ID=cds2059;Parent=gene2123;Dbxref=Genbank:WP_012105164.1;Name=WP_012105164.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_012105164.1;transl_table=11 NC_009708.1 RefSeq gene 2418497 2419513 . - . ID=gene2124;Name=YPSIP31758_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11840;old_locus_tag=YpsIP31758_2107 NC_009708.1 Protein Homology CDS 2418497 2419513 . - 0 ID=cds2060;Parent=gene2124;Dbxref=Genbank:WP_011192380.1;Name=WP_011192380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192380.1;transl_table=11 NC_009708.1 RefSeq gene 2419527 2420534 . - . ID=gene2125;Name=YPSIP31758_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11845;old_locus_tag=YpsIP31758_2108 NC_009708.1 Protein Homology CDS 2419527 2420534 . - 0 ID=cds2061;Parent=gene2125;Dbxref=Genbank:WP_012105165.1;Name=WP_012105165.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_012105165.1;transl_table=11 NC_009708.1 RefSeq gene 2421531 2423165 . + . ID=gene2126;Name=YPSIP31758_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11850;old_locus_tag=YpsIP31758_2109 NC_009708.1 Protein Homology CDS 2421531 2423165 . + 0 ID=cds2062;Parent=gene2126;Dbxref=Genbank:WP_041175766.1;Name=WP_041175766.1;gbkey=CDS;product=chorismate-binding protein;protein_id=WP_041175766.1;transl_table=11 NC_009708.1 RefSeq gene 2423343 2423915 . - . ID=gene2127;Name=YPSIP31758_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11855;old_locus_tag=YpsIP31758_2110 NC_009708.1 Protein Homology CDS 2423343 2423915 . - 0 ID=cds2063;Parent=gene2127;Dbxref=Genbank:WP_012105167.1;Name=WP_012105167.1;gbkey=CDS;product=cold inducible protein Ves;protein_id=WP_012105167.1;transl_table=11 NC_009708.1 RefSeq gene 2423915 2425285 . - . ID=gene2128;Name=YPSIP31758_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11860;old_locus_tag=YpsIP31758_2111 NC_009708.1 Protein Homology CDS 2423915 2425285 . - 0 ID=cds2064;Parent=gene2128;Dbxref=Genbank:WP_002211279.1;Name=WP_002211279.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_002211279.1;transl_table=11 NC_009708.1 RefSeq gene 2425433 2426200 . + . ID=gene2129;Name=YPSIP31758_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11865;old_locus_tag=YpsIP31758_2112 NC_009708.1 Protein Homology CDS 2425433 2426200 . + 0 ID=cds2065;Parent=gene2129;Dbxref=Genbank:WP_002211280.1;Name=WP_002211280.1;gbkey=CDS;product=histidine utilization repressor;protein_id=WP_002211280.1;transl_table=11 NC_009708.1 RefSeq gene 2426411 2427631 . + . ID=gene2130;Name=YPSIP31758_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11870;old_locus_tag=YpsIP31758_2113 NC_009708.1 Protein Homology CDS 2426411 2427631 . + 0 ID=cds2066;Parent=gene2130;Dbxref=Genbank:WP_011192374.1;Name=WP_011192374.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_011192374.1;transl_table=11 NC_009708.1 RefSeq gene 2427628 2428434 . + . ID=gene2131;Name=YPSIP31758_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11875;old_locus_tag=YpsIP31758_2114 NC_009708.1 Protein Homology CDS 2427628 2428434 . + 0 ID=cds2067;Parent=gene2131;Dbxref=Genbank:WP_012105168.1;Name=WP_012105168.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_012105168.1;transl_table=11 NC_009708.1 RefSeq gene 2429029 2430111 . - . ID=gene2132;Name=YPSIP31758_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11880;old_locus_tag=YpsIP31758_2115 NC_009708.1 Protein Homology CDS 2429029 2430111 . - 0 ID=cds2068;Parent=gene2132;Dbxref=Genbank:WP_002230843.1;Name=WP_002230843.1;gbkey=CDS;product=porin;protein_id=WP_002230843.1;transl_table=11 NC_009708.1 RefSeq gene 2430838 2431830 . - . ID=gene2133;Name=YPSIP31758_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11885;old_locus_tag=YpsIP31758_2117 NC_009708.1 Protein Homology CDS 2430838 2431830 . - 0 ID=cds2069;Parent=gene2133;Dbxref=Genbank:WP_002212028.1;Name=WP_002212028.1;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=WP_002212028.1;transl_table=11 NC_009708.1 RefSeq gene 2431891 2433234 . - . ID=gene2134;Name=YPSIP31758_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11890;old_locus_tag=YpsIP31758_2118 NC_009708.1 Protein Homology CDS 2431891 2433234 . - 0 ID=cds2070;Parent=gene2134;Dbxref=Genbank:WP_012105170.1;Name=WP_012105170.1;gbkey=CDS;product=N-succinylarginine dihydrolase;protein_id=WP_012105170.1;transl_table=11 NC_009708.1 RefSeq gene 2433258 2434775 . - . ID=gene2135;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11895;old_locus_tag=YpsIP31758_2119 NC_009708.1 Protein Homology CDS 2433258 2434775 . - 0 ID=cds2071;Parent=gene2135;Dbxref=Genbank:WP_049756383.1;Name=WP_049756383.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_049756383.1;transl_table=11 NC_009708.1 RefSeq gene 2434772 2435824 . - . ID=gene2136;Name=YPSIP31758_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11900;old_locus_tag=YpsIP31758_2120 NC_009708.1 Protein Homology CDS 2434772 2435824 . - 0 ID=cds2072;Parent=gene2136;Dbxref=Genbank:WP_041175767.1;Name=WP_041175767.1;gbkey=CDS;product=arginine succinyltransferase;protein_id=WP_041175767.1;transl_table=11 NC_009708.1 RefSeq gene 2435854 2437098 . - . ID=gene2137;Name=YPSIP31758_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11905;old_locus_tag=YpsIP31758_2121 NC_009708.1 Protein Homology CDS 2435854 2437098 . - 0 ID=cds2073;Parent=gene2137;Dbxref=Genbank:WP_012105173.1;Name=WP_012105173.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;gbkey=CDS;product=succinylornithine aminotransferase;protein_id=WP_012105173.1;transl_table=11 NC_009708.1 RefSeq gene 2437296 2437439 . - . ID=gene2138;Name=YPSIP31758_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11910 NC_009708.1 Protein Homology CDS 2437296 2437439 . - 0 ID=cds2074;Parent=gene2138;Dbxref=Genbank:WP_002353347.1;Name=WP_002353347.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353347.1;transl_table=11 NC_009708.1 RefSeq gene 2437735 2439156 . - . ID=gene2139;Name=YPSIP31758_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11915;old_locus_tag=YpsIP31758_2122 NC_009708.1 Protein Homology CDS 2437735 2439156 . - 0 ID=cds2075;Parent=gene2139;Dbxref=Genbank:WP_002212033.1;Name=WP_002212033.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212033.1;transl_table=11 NC_009708.1 RefSeq gene 2439466 2441247 . + . ID=gene2140;Name=YPSIP31758_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11920;old_locus_tag=YpsIP31758_2123 NC_009708.1 Protein Homology CDS 2439466 2441247 . + 0 ID=cds2076;Parent=gene2140;Dbxref=Genbank:WP_012105174.1;Name=WP_012105174.1;gbkey=CDS;product=nitrate/nitrite two-component system sensor histidine kinase;protein_id=WP_012105174.1;transl_table=11 NC_009708.1 RefSeq gene 2441814 2442914 . + . ID=gene2141;Name=YPSIP31758_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11925;old_locus_tag=YpsIP31758_2124 NC_009708.1 Protein Homology CDS 2441814 2442914 . + 0 ID=cds2077;Parent=gene2141;Dbxref=Genbank:WP_002212036.1;Name=WP_002212036.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002212036.1;transl_table=11 NC_009708.1 RefSeq gene 2443017 2443805 . - . ID=gene2142;Name=YPSIP31758_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11930;old_locus_tag=YpsIP31758_2125 NC_009708.1 Protein Homology CDS 2443017 2443805 . - 0 ID=cds2078;Parent=gene2142;Dbxref=Genbank:WP_002212037.1;Name=WP_002212037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212037.1;transl_table=11 NC_009708.1 RefSeq gene 2443865 2444143 . - . ID=gene2143;Name=YPSIP31758_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11935;old_locus_tag=YpsIP31758_2126 NC_009708.1 Protein Homology CDS 2443865 2444143 . - 0 ID=cds2079;Parent=gene2143;Dbxref=Genbank:WP_012105175.1;Name=WP_012105175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105175.1;transl_table=11 NC_009708.1 RefSeq gene 2444582 2445292 . - . ID=gene2144;Name=YPSIP31758_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11940;old_locus_tag=YpsIP31758_2127 NC_009708.1 Protein Homology CDS 2444582 2445292 . - 0 ID=cds2080;Parent=gene2144;Dbxref=Genbank:WP_002367661.1;Name=WP_002367661.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002367661.1;transl_table=11 NC_009708.1 RefSeq gene 2445831 2446298 . - . ID=gene2145;Name=hmsS;gbkey=Gene;gene=hmsS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11945;old_locus_tag=YpsIP31758_2128 NC_009708.1 Protein Homology CDS 2445831 2446298 . - 0 ID=cds2081;Parent=gene2145;Dbxref=Genbank:WP_002212041.1;Name=WP_002212041.1;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsS;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_002212041.1;transl_table=11 NC_009708.1 RefSeq gene 2446295 2447629 . - . ID=gene2146;Name=YPSIP31758_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11950;old_locus_tag=YpsIP31758_2129 NC_009708.1 Protein Homology CDS 2446295 2447629 . - 0 ID=cds2082;Parent=gene2146;Dbxref=Genbank:WP_002224456.1;Name=WP_002224456.1;Note=predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein;gbkey=CDS;product=N-glycosyltransferase;protein_id=WP_002224456.1;transl_table=11 NC_009708.1 RefSeq gene 2447619 2449640 . - . ID=gene2147;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11955;old_locus_tag=YpsIP31758_2130 NC_009708.1 Protein Homology CDS 2447619 2449640 . - 0 ID=cds2083;Parent=gene2147;Dbxref=Genbank:WP_002212043.1;Name=WP_002212043.1;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export;gbkey=CDS;gene=pgaB;product=biofilm PGA synthesis lipoprotein PgaB;protein_id=WP_002212043.1;transl_table=11 NC_009708.1 RefSeq gene 2449653 2452121 . - . ID=gene2148;Name=hmsH;gbkey=Gene;gene=hmsH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11960;old_locus_tag=YpsIP31758_2131 NC_009708.1 Protein Homology CDS 2449653 2452121 . - 0 ID=cds2084;Parent=gene2148;Dbxref=Genbank:WP_012105176.1;Name=WP_012105176.1;Note=in Yersinia this protein is important for biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsH;product=outer membrane protein;protein_id=WP_012105176.1;transl_table=11 NC_009708.1 RefSeq gene 2452790 2454007 . - . ID=gene2149;Name=YPSIP31758_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11965;old_locus_tag=YpsIP31758_2132 NC_009708.1 Protein Homology CDS 2452790 2454007 . - 0 ID=cds2085;Parent=gene2149;Dbxref=Genbank:WP_011192365.1;Name=WP_011192365.1;gbkey=CDS;product=peptidase M24;protein_id=WP_011192365.1;transl_table=11 NC_009708.1 RefSeq gene 2454148 2455035 . - . ID=gene2150;Name=YPSIP31758_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11970;old_locus_tag=YpsIP31758_2133 NC_009708.1 Protein Homology CDS 2454148 2455035 . - 0 ID=cds2086;Parent=gene2150;Dbxref=Genbank:WP_002212046.1;Name=WP_002212046.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;product=tellurite resistance methyltransferase TehB;protein_id=WP_002212046.1;transl_table=11 NC_009708.1 RefSeq gene 2455208 2455519 . - . ID=gene2151;Name=YPSIP31758_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11975;old_locus_tag=YpsIP31758_2134 NC_009708.1 Protein Homology CDS 2455208 2455519 . - 0 ID=cds2087;Parent=gene2151;Dbxref=Genbank:WP_012105177.1;Name=WP_012105177.1;gbkey=CDS;product=cytochrome;protein_id=WP_012105177.1;transl_table=11 NC_009708.1 RefSeq gene 2455519 2456016 . - . ID=gene2152;Name=YPSIP31758_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11980;old_locus_tag=YpsIP31758_2135 NC_009708.1 Protein Homology CDS 2455519 2456016 . - 0 ID=cds2088;Parent=gene2152;Dbxref=Genbank:WP_002212048.1;Name=WP_002212048.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002212048.1;transl_table=11 NC_009708.1 RefSeq gene 2456006 2456719 . - . ID=gene2153;Name=YPSIP31758_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11985;old_locus_tag=YpsIP31758_2136 NC_009708.1 Protein Homology CDS 2456006 2456719 . - 0 ID=cds2089;Parent=gene2153;Dbxref=Genbank:WP_011192364.1;Name=WP_011192364.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_011192364.1;transl_table=11 NC_009708.1 RefSeq gene 2456723 2457871 . - . ID=gene2154;Name=YPSIP31758_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11990;old_locus_tag=YpsIP31758_2137 NC_009708.1 Protein Homology CDS 2456723 2457871 . - 0 ID=cds2090;Parent=gene2154;Dbxref=Genbank:WP_042592836.1;Name=WP_042592836.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_042592836.1;transl_table=11 NC_009708.1 RefSeq gene 2457894 2459186 . - . ID=gene2155;Name=YPSIP31758_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS11995;old_locus_tag=YpsIP31758_2138 NC_009708.1 Protein Homology CDS 2457894 2459186 . - 0 ID=cds2091;Parent=gene2155;Dbxref=Genbank:WP_002212051.1;Name=WP_002212051.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212051.1;transl_table=11 NC_009708.1 RefSeq gene 2459189 2460598 . - . ID=gene2156;Name=YPSIP31758_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12000;old_locus_tag=YpsIP31758_2139 NC_009708.1 Protein Homology CDS 2459189 2460598 . - 0 ID=cds2092;Parent=gene2156;Dbxref=Genbank:WP_002212052.1;Name=WP_002212052.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212052.1;transl_table=11 NC_009708.1 RefSeq gene 2460899 2461426 . - . ID=gene2157;Name=YPSIP31758_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12005;old_locus_tag=YpsIP31758_2140 NC_009708.1 Protein Homology CDS 2460899 2461426 . - 0 ID=cds2093;Parent=gene2157;Dbxref=Genbank:WP_002212053.1;Name=WP_002212053.1;gbkey=CDS;product=iron transporter;protein_id=WP_002212053.1;transl_table=11 NC_009708.1 RefSeq gene 2461630 2463549 . - . ID=gene2158;Name=YPSIP31758_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12010;old_locus_tag=YpsIP31758_2141 NC_009708.1 Protein Homology CDS 2461630 2463549 . - 0 ID=cds2094;Parent=gene2158;Dbxref=Genbank:WP_002213978.1;Name=WP_002213978.1;gbkey=CDS;product=iron permease;protein_id=WP_002213978.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2463975 2464142 . + . ID=id204;gbkey=repeat_region NC_009708.1 RefSeq gene 2464149 2465789 . - . ID=gene2159;Name=YPSIP31758_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12015;old_locus_tag=YpsIP31758_2142 NC_009708.1 Protein Homology CDS 2464149 2465789 . - 0 ID=cds2095;Parent=gene2159;Dbxref=Genbank:WP_012105179.1;Name=WP_012105179.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012105179.1;transl_table=11 NC_009708.1 RefSeq gene 2465900 2466907 . - . ID=gene2160;Name=YPSIP31758_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12020;old_locus_tag=YpsIP31758_2143 NC_009708.1 Protein Homology CDS 2465900 2466907 . - 0 ID=cds2096;Parent=gene2160;Dbxref=Genbank:WP_002212056.1;Name=WP_002212056.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002212056.1;transl_table=11 NC_009708.1 RefSeq gene 2468118 2468888 . + . ID=gene2161;Name=YPSIP31758_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12025;old_locus_tag=YpsIP31758_2145 NC_009708.1 Protein Homology CDS 2468118 2468888 . + 0 ID=cds2097;Parent=gene2161;Dbxref=Genbank:WP_002212058.1;Name=WP_002212058.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002212058.1;transl_table=11 NC_009708.1 RefSeq gene 2469635 2471164 . + . ID=gene2162;Name=YPSIP31758_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12030;old_locus_tag=YpsIP31758_2147 NC_009708.1 Protein Homology CDS 2469635 2471164 . + 0 ID=cds2098;Parent=gene2162;Dbxref=Genbank:WP_002212059.1;Name=WP_002212059.1;Note=involved in the transporte of L-asparagine;gbkey=CDS;product=L-asparagine permease;protein_id=WP_002212059.1;transl_table=11 NC_009708.1 RefSeq gene 2471360 2472520 . - . ID=gene2163;Name=YPSIP31758_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12035;old_locus_tag=YpsIP31758_2148 NC_009708.1 Protein Homology CDS 2471360 2472520 . - 0 ID=cds2099;Parent=gene2163;Dbxref=Genbank:WP_002212060.1;Name=WP_002212060.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002212060.1;transl_table=11 NC_009708.1 RefSeq gene 2472872 2473471 . + . ID=gene2164;Name=YPSIP31758_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12040;old_locus_tag=YpsIP31758_2149 NC_009708.1 Protein Homology CDS 2472872 2473471 . + 0 ID=cds2100;Parent=gene2164;Dbxref=Genbank:WP_002212061.1;Name=WP_002212061.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002212061.1;transl_table=11 NC_009708.1 RefSeq gene 2473776 2474738 . - . ID=gene2165;Name=YPSIP31758_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12045;old_locus_tag=YpsIP31758_2150 NC_009708.1 Protein Homology CDS 2473776 2474738 . - 0 ID=cds2101;Parent=gene2165;Dbxref=Genbank:WP_012105181.1;Name=WP_012105181.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012105181.1;transl_table=11 NC_009708.1 RefSeq gene 2474850 2475719 . + . ID=gene2166;Name=YPSIP31758_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12050;old_locus_tag=YpsIP31758_2151 NC_009708.1 Protein Homology CDS 2474850 2475719 . + 0 ID=cds2102;Parent=gene2166;Dbxref=Genbank:WP_002212063.1;Name=WP_002212063.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212063.1;transl_table=11 NC_009708.1 RefSeq gene 2475785 2477014 . + . ID=gene2167;Name=YPSIP31758_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12055;old_locus_tag=YpsIP31758_2152 NC_009708.1 Protein Homology CDS 2475785 2477014 . + 0 ID=cds2103;Parent=gene2167;Dbxref=Genbank:WP_012105182.1;Name=WP_012105182.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012105182.1;transl_table=11 NC_009708.1 RefSeq gene 2477234 2477794 . + . ID=gene2168;Name=YPSIP31758_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12060;old_locus_tag=YpsIP31758_2153 NC_009708.1 Protein Homology CDS 2477234 2477794 . + 0 ID=cds2104;Parent=gene2168;Dbxref=Genbank:WP_012105183.1;Name=WP_012105183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105183.1;transl_table=11 NC_009708.1 RefSeq gene 2477819 2478292 . + . ID=gene2169;Name=YPSIP31758_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12065;old_locus_tag=YpsIP31758_2154 NC_009708.1 Protein Homology CDS 2477819 2478292 . + 0 ID=cds2105;Parent=gene2169;Dbxref=Genbank:WP_011192359.1;Name=WP_011192359.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192359.1;transl_table=11 NC_009708.1 RefSeq gene 2478367 2479245 . - . ID=gene2170;Name=YPSIP31758_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12070;old_locus_tag=YpsIP31758_2155 NC_009708.1 Protein Homology CDS 2478367 2479245 . - 0 ID=cds2106;Parent=gene2170;Dbxref=Genbank:WP_012105184.1;Name=WP_012105184.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012105184.1;transl_table=11 NC_009708.1 RefSeq gene 2479340 2480182 . + . ID=gene2171;Name=YPSIP31758_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12075;old_locus_tag=YpsIP31758_2156 NC_009708.1 Protein Homology CDS 2479340 2480182 . + 0 ID=cds2107;Parent=gene2171;Dbxref=Genbank:WP_012105185.1;Name=WP_012105185.1;gbkey=CDS;product=citrate lyase;protein_id=WP_012105185.1;transl_table=11 NC_009708.1 RefSeq gene 2480247 2480774 . + . ID=gene2172;Name=YPSIP31758_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12080;old_locus_tag=YpsIP31758_2157 NC_009708.1 Protein Homology CDS 2480247 2480774 . + 0 ID=cds2108;Parent=gene2172;Dbxref=Genbank:WP_002212069.1;Name=WP_002212069.1;gbkey=CDS;product=molybdenum cofactor biosynthesis protein MoeC;protein_id=WP_002212069.1;transl_table=11 NC_009708.1 RefSeq gene 2480797 2482119 . + . ID=gene2173;Name=YPSIP31758_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12085;old_locus_tag=YpsIP31758_2158 NC_009708.1 Protein Homology CDS 2480797 2482119 . + 0 ID=cds2109;Parent=gene2173;Dbxref=Genbank:WP_012105187.1;Name=WP_012105187.1;gbkey=CDS;product=4-hydroxybutyrate CoA-transferase;protein_id=WP_012105187.1;transl_table=11 NC_009708.1 RefSeq gene 2482946 2483578 . + . ID=gene2174;Name=YPSIP31758_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12090;old_locus_tag=YpsIP31758_2160 NC_009708.1 Protein Homology CDS 2482946 2483578 . + 0 ID=cds2110;Parent=gene2174;Dbxref=Genbank:WP_002212073.1;Name=WP_002212073.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002212073.1;transl_table=11 NC_009708.1 RefSeq gene 2483694 2487554 . + . ID=gene2175;Name=YPSIP31758_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12095;old_locus_tag=YpsIP31758_2161 NC_009708.1 Protein Homology CDS 2483694 2487554 . + 0 ID=cds2111;Parent=gene2175;Dbxref=Genbank:WP_012105189.1;Name=WP_012105189.1;gbkey=CDS;product=histidine protein kinase;protein_id=WP_012105189.1;transl_table=11 NC_009708.1 RefSeq gene 2487935 2488465 . + . ID=gene2176;Name=YPSIP31758_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12100;old_locus_tag=YpsIP31758_2163 NC_009708.1 Protein Homology CDS 2487935 2488465 . + 0 ID=cds2112;Parent=gene2176;Dbxref=Genbank:WP_002213971.1;Name=WP_002213971.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002213971.1;transl_table=11 NC_009708.1 RefSeq gene 2488558 2489289 . + . ID=gene2177;Name=YPSIP31758_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12105;old_locus_tag=YpsIP31758_2164 NC_009708.1 Protein Homology CDS 2488558 2489289 . + 0 ID=cds2113;Parent=gene2177;Dbxref=Genbank:WP_012105190.1;Name=WP_012105190.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_012105190.1;transl_table=11 NC_009708.1 RefSeq gene 2489365 2491929 . + . ID=gene2178;Name=YPSIP31758_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12110;old_locus_tag=YpsIP31758_2165 NC_009708.1 Protein Homology CDS 2489365 2491929 . + 0 ID=cds2114;Parent=gene2178;Dbxref=Genbank:WP_012105191.1;Name=WP_012105191.1;gbkey=CDS;product=ferrous iron transporter B;protein_id=WP_012105191.1;transl_table=11 NC_009708.1 RefSeq gene 2491945 2493294 . + . ID=gene2179;Name=YPSIP31758_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12115;old_locus_tag=YpsIP31758_2166 NC_009708.1 Protein Homology CDS 2491945 2493294 . + 0 ID=cds2115;Parent=gene2179;Dbxref=Genbank:WP_002213964.1;Name=WP_002213964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213964.1;transl_table=11 NC_009708.1 RefSeq gene 2493291 2494031 . + . ID=gene2180;Name=YPSIP31758_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12120;old_locus_tag=YpsIP31758_2167 NC_009708.1 Protein Homology CDS 2493291 2494031 . + 0 ID=cds2116;Parent=gene2180;Dbxref=Genbank:WP_002227954.1;Name=WP_002227954.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002227954.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2494309 2494418 . + . ID=id205;gbkey=repeat_region NC_009708.1 RefSeq gene 2494339 2494414 . + . ID=gene2181;Name=YPSIP31758_RS12125;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS12125;old_locus_tag=YpsIP31758_4235 NC_009708.1 tRNAscan-SE tRNA 2494339 2494414 . + . ID=rna61;Parent=gene2181;anticodon=(pos:2494372..2494374);gbkey=tRNA;product=tRNA-Asn NC_009708.1 tRNAscan-SE exon 2494339 2494414 . + . ID=id206;Parent=rna61;anticodon=(pos:2494372..2494374);gbkey=tRNA;product=tRNA-Asn NC_009708.1 RefSeq gene 2494474 2494698 . + . ID=gene2182;Name=YPSIP31758_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12130;old_locus_tag=YpsIP31758_2168 NC_009708.1 Protein Homology CDS 2494474 2494698 . + 0 ID=cds2117;Parent=gene2182;Dbxref=Genbank:WP_002213183.1;Name=WP_002213183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213183.1;transl_table=11 NC_009708.1 RefSeq gene 2494708 2495850 . - . ID=gene2183;Name=YPSIP31758_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12135;old_locus_tag=YpsIP31758_2169 NC_009708.1 Protein Homology CDS 2494708 2495850 . - 0 ID=cds2118;Parent=gene2183;Dbxref=Genbank:WP_012105192.1;Name=WP_012105192.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105192.1;transl_table=11 NC_009708.1 RefSeq gene 2495875 2496702 . - . ID=gene2184;Name=YPSIP31758_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12140;old_locus_tag=YpsIP31758_2170 NC_009708.1 Protein Homology CDS 2495875 2496702 . - 0 ID=cds2119;Parent=gene2184;Dbxref=Genbank:WP_012105193.1;Name=WP_012105193.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012105193.1;transl_table=11 NC_009708.1 RefSeq gene 2496695 2497541 . - . ID=gene2185;Name=YPSIP31758_RS12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12145;old_locus_tag=YpsIP31758_2171;pseudo=true NC_009708.1 Protein Homology CDS 2496695 2497541 . - 0 ID=cds2120;Parent=gene2185;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter permease;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2497608 2498876 . - . ID=gene2186;Name=YPSIP31758_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12150;old_locus_tag=YpsIP31758_2172 NC_009708.1 Protein Homology CDS 2497608 2498876 . - 0 ID=cds2121;Parent=gene2186;Dbxref=Genbank:WP_012105195.1;Name=WP_012105195.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_012105195.1;transl_table=11 NC_009708.1 RefSeq gene 2498906 2499919 . - . ID=gene2187;Name=YPSIP31758_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12155;old_locus_tag=YpsIP31758_2173 NC_009708.1 Protein Homology CDS 2498906 2499919 . - 0 ID=cds2122;Parent=gene2187;Dbxref=Genbank:WP_012105196.1;Name=WP_012105196.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_012105196.1;transl_table=11 NC_009708.1 RefSeq gene 2500327 2500607 . + . ID=gene2188;Name=YPSIP31758_RS12160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12160;pseudo=true NC_009708.1 Protein Homology CDS 2500327 2500607 . + 0 ID=cds2123;Parent=gene2188;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2500580 2501374 . - . ID=gene2189;Name=YPSIP31758_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12165;old_locus_tag=YpsIP31758_2176 NC_009708.1 Protein Homology CDS 2500580 2501374 . - 0 ID=cds2124;Parent=gene2189;Dbxref=Genbank:WP_012105199.1;Name=WP_012105199.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_012105199.1;transl_table=11 NC_009708.1 RefSeq gene 2501561 2501665 . - . ID=gene2190;Name=YPSIP31758_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12170 NC_009708.1 Protein Homology CDS 2501561 2501665 . - 0 ID=cds2125;Parent=gene2190;Dbxref=Genbank:WP_002215419.1;Name=WP_002215419.1;gbkey=CDS;product=transposase;protein_id=WP_002215419.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2502053 2503732 . + . ID=id207;gbkey=repeat_region NC_009708.1 RefSeq gene 2502343 2502777 . + . ID=gene2191;Name=YPSIP31758_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12180;old_locus_tag=YpsIP31758_2177 NC_009708.1 Protein Homology CDS 2502343 2502777 . + 0 ID=cds2126;Parent=gene2191;Dbxref=Genbank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NC_009708.1 RefSeq gene 2502789 2503358 . + . ID=gene2192;Name=YPSIP31758_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12185;old_locus_tag=YpsIP31758_2178 NC_009708.1 Protein Homology CDS 2502789 2503358 . + 0 ID=cds2127;Parent=gene2192;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NC_009708.1 RefSeq gene 2503776 2504974 . - . ID=gene2193;Name=YPSIP31758_RS12190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12190;pseudo=true NC_009708.1 Protein Homology CDS 2503776 2504974 . - 0 ID=cds2128;Parent=gene2193;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 2504814 2505046 . + . ID=id208;gbkey=repeat_region NC_009708.1 RefSeq gene 2505022 2506098 . - . ID=gene2194;Name=YPSIP31758_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12195;old_locus_tag=YpsIP31758_2180 NC_009708.1 Protein Homology CDS 2505022 2506098 . - 0 ID=cds2129;Parent=gene2194;Dbxref=Genbank:WP_012105200.1;Name=WP_012105200.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105200.1;transl_table=11 NC_009708.1 RefSeq gene 2506164 2506454 . - . ID=gene2195;Name=YPSIP31758_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12200;old_locus_tag=YpsIP31758_2181 NC_009708.1 Protein Homology CDS 2506164 2506454 . - 0 ID=cds2130;Parent=gene2195;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11 NC_009708.1 RefSeq gene 2506435 2506706 . - . ID=gene2196;Name=YPSIP31758_RS12205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12205;pseudo=true NC_009708.1 Protein Homology CDS 2506435 2506706 . - 0 ID=cds2131;Parent=gene2196;exception=annotated by transcript or proteomic data;gbkey=CDS;product=toxin;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2506842 2507096 . + . ID=gene2197;Name=YPSIP31758_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12210;old_locus_tag=YpsIP31758_2183 NC_009708.1 Protein Homology CDS 2506842 2507096 . + 0 ID=cds2132;Parent=gene2197;Dbxref=Genbank:WP_002213211.1;Name=WP_002213211.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_002213211.1;transl_table=11 NC_009708.1 RefSeq gene 2507093 2507392 . + . ID=gene2198;Name=YPSIP31758_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12215;old_locus_tag=YpsIP31758_2184 NC_009708.1 Protein Homology CDS 2507093 2507392 . + 0 ID=cds2133;Parent=gene2198;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11 NC_009708.1 RefSeq gene 2507409 2507696 . + . ID=gene2199;Name=YPSIP31758_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12220;old_locus_tag=YpsIP31758_2185 NC_009708.1 Protein Homology CDS 2507409 2507696 . + 0 ID=cds2134;Parent=gene2199;Dbxref=Genbank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215413.1;transl_table=11 NC_009708.1 RefSeq gene 2508131 2508347 . + . ID=gene2200;Name=YPSIP31758_RS12225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12225;pseudo=true NC_009708.1 Protein Homology CDS 2508131 2508347 . + 0 ID=cds2135;Parent=gene2200;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2508344 2508649 . + . ID=gene2201;Name=YPSIP31758_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12230 NC_009708.1 Protein Homology CDS 2508344 2508649 . + 0 ID=cds2136;Parent=gene2201;Dbxref=Genbank:WP_041175768.1;Name=WP_041175768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175768.1;transl_table=11 NC_009708.1 RefSeq gene 2508630 2508908 . + . ID=gene2202;Name=YPSIP31758_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12235 NC_009708.1 Protein Homology CDS 2508630 2508908 . + 0 ID=cds2137;Parent=gene2202;Dbxref=Genbank:WP_002215410.1;Name=WP_002215410.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215410.1;transl_table=11 NC_009708.1 RefSeq gene 2509054 2510223 . + . ID=gene2203;Name=YPSIP31758_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12240;old_locus_tag=YpsIP31758_2187 NC_009708.1 Protein Homology CDS 2509054 2510223 . + 0 ID=cds2138;Parent=gene2203;Dbxref=Genbank:WP_012105202.1;Name=WP_012105202.1;gbkey=CDS;product=tail sheath protein;protein_id=WP_012105202.1;transl_table=11 NC_009708.1 RefSeq gene 2510235 2510750 . + . ID=gene2204;Name=YPSIP31758_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12245;old_locus_tag=YpsIP31758_2188 NC_009708.1 Protein Homology CDS 2510235 2510750 . + 0 ID=cds2139;Parent=gene2204;Dbxref=Genbank:WP_012105203.1;Name=WP_012105203.1;gbkey=CDS;product=major tail tube protein;protein_id=WP_012105203.1;transl_table=11 NC_009708.1 RefSeq gene 2510897 2511151 . + . ID=gene2205;Name=YPSIP31758_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12250;old_locus_tag=YpsIP31758_2189 NC_009708.1 Protein Homology CDS 2510897 2511151 . + 0 ID=cds2140;Parent=gene2205;Dbxref=Genbank:WP_042593125.1;Name=WP_042593125.1;gbkey=CDS;product=phage tail protein;protein_id=WP_042593125.1;transl_table=11 NC_009708.1 RefSeq gene 2511278 2514194 . + . ID=gene2206;Name=YPSIP31758_RS12255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12255;pseudo=true NC_009708.1 Protein Homology CDS 2511278 2514194 . + 0 ID=cds2141;Parent=gene2206;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2514206 2514670 . + . ID=gene2207;Name=YPSIP31758_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12260;old_locus_tag=YpsIP31758_2192 NC_009708.1 Protein Homology CDS 2514206 2514670 . + 0 ID=cds2142;Parent=gene2207;Dbxref=Genbank:WP_012105204.1;Name=WP_012105204.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_012105204.1;transl_table=11 NC_009708.1 RefSeq gene 2514667 2515761 . + . ID=gene2208;Name=YPSIP31758_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12265;old_locus_tag=YpsIP31758_2193 NC_009708.1 Protein Homology CDS 2514667 2515761 . + 0 ID=cds2143;Parent=gene2208;Dbxref=Genbank:WP_012105205.1;Name=WP_012105205.1;gbkey=CDS;product=late control protein D;protein_id=WP_012105205.1;transl_table=11 NC_009708.1 RefSeq gene 2515836 2516051 . + . ID=gene2209;Name=YPSIP31758_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12270;old_locus_tag=YpsIP31758_2194 NC_009708.1 Protein Homology CDS 2515836 2516051 . + 0 ID=cds2144;Parent=gene2209;Dbxref=Genbank:WP_012105206.1;Name=WP_012105206.1;gbkey=CDS;product=phage transcriptional activator%2C Ogr/Delta;protein_id=WP_012105206.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2516205 2516328 . + . ID=id209;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 2516546 2518225 . + . ID=id210;gbkey=repeat_region NC_009708.1 RefSeq gene 2516836 2517270 . + . ID=gene2210;Name=YPSIP31758_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12275;old_locus_tag=YpsIP31758_2195 NC_009708.1 Protein Homology CDS 2516836 2517270 . + 0 ID=cds2145;Parent=gene2210;Dbxref=Genbank:WP_012105207.1;Name=WP_012105207.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105207.1;transl_table=11 NC_009708.1 RefSeq gene 2517282 2517851 . + . ID=gene2211;Name=YPSIP31758_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12280;old_locus_tag=YpsIP31758_2196 NC_009708.1 Protein Homology CDS 2517282 2517851 . + 0 ID=cds2146;Parent=gene2211;Dbxref=Genbank:WP_012105208.1;Name=WP_012105208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105208.1;transl_table=11 NC_009708.1 RefSeq gene 2518391 2519047 . - . ID=gene2212;Name=YPSIP31758_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12285;old_locus_tag=YpsIP31758_2197 NC_009708.1 Protein Homology CDS 2518391 2519047 . - 0 ID=cds2147;Parent=gene2212;Dbxref=Genbank:WP_012105209.1;Name=WP_012105209.1;gbkey=CDS;product=tail fiber assembly protein;protein_id=WP_012105209.1;transl_table=11 NC_009708.1 RefSeq gene 2519047 2519499 . - . ID=gene2213;Name=YPSIP31758_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12290 NC_009708.1 Protein Homology CDS 2519047 2519499 . - 0 ID=cds2148;Parent=gene2213;Dbxref=Genbank:WP_041175863.1;Name=WP_041175863.1;gbkey=CDS;product=tail fiber protein;protein_id=WP_041175863.1;transl_table=11 NC_009708.1 RefSeq gene 2520267 2520911 . - . ID=gene2214;Name=YPSIP31758_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12300;old_locus_tag=YpsIP31758_2199 NC_009708.1 Protein Homology CDS 2520267 2520911 . - 0 ID=cds2149;Parent=gene2214;Dbxref=Genbank:WP_012105211.1;Name=WP_012105211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105211.1;transl_table=11 NC_009708.1 RefSeq gene 2520904 2522103 . - . ID=gene2215;Name=YPSIP31758_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12305;old_locus_tag=YpsIP31758_2200 NC_009708.1 Protein Homology CDS 2520904 2522103 . - 0 ID=cds2150;Parent=gene2215;Dbxref=Genbank:WP_012105212.1;Name=WP_012105212.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_012105212.1;transl_table=11 NC_009708.1 RefSeq gene 2522103 2522453 . - . ID=gene2216;Name=YPSIP31758_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12310;old_locus_tag=YpsIP31758_2201 NC_009708.1 Protein Homology CDS 2522103 2522453 . - 0 ID=cds2151;Parent=gene2216;Dbxref=Genbank:WP_012105213.1;Name=WP_012105213.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105213.1;transl_table=11 NC_009708.1 RefSeq gene 2522527 2523204 . - . ID=gene2217;Name=YPSIP31758_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12315;old_locus_tag=YpsIP31758_2202 NC_009708.1 Protein Homology CDS 2522527 2523204 . - 0 ID=cds2152;Parent=gene2217;Dbxref=Genbank:WP_012105214.1;Name=WP_012105214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105214.1;transl_table=11 NC_009708.1 RefSeq gene 2523212 2524105 . - . ID=gene2218;Name=YPSIP31758_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12320;old_locus_tag=YpsIP31758_2203 NC_009708.1 Protein Homology CDS 2523212 2524105 . - 0 ID=cds2153;Parent=gene2218;Dbxref=Genbank:WP_012105215.1;Name=WP_012105215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105215.1;transl_table=11 NC_009708.1 RefSeq gene 2524098 2524388 . - . ID=gene2219;Name=YPSIP31758_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12325;old_locus_tag=YpsIP31758_2204 NC_009708.1 Protein Homology CDS 2524098 2524388 . - 0 ID=cds2154;Parent=gene2219;Dbxref=Genbank:WP_012105216.1;Name=WP_012105216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105216.1;transl_table=11 NC_009708.1 RefSeq gene 2524388 2525056 . - . ID=gene2220;Name=YPSIP31758_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12330;old_locus_tag=YpsIP31758_2205 NC_009708.1 Protein Homology CDS 2524388 2525056 . - 0 ID=cds2155;Parent=gene2220;Dbxref=Genbank:WP_012105217.1;Name=WP_012105217.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105217.1;transl_table=11 NC_009708.1 RefSeq gene 2525056 2526912 . - . ID=gene2221;Name=YPSIP31758_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12335;old_locus_tag=YpsIP31758_2206 NC_009708.1 Protein Homology CDS 2525056 2526912 . - 0 ID=cds2156;Parent=gene2221;Dbxref=Genbank:WP_041175769.1;Name=WP_041175769.1;gbkey=CDS;product=lysozyme;protein_id=WP_041175769.1;transl_table=11 NC_009708.1 RefSeq gene 2527043 2527549 . - . ID=gene2222;Name=YPSIP31758_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12340 NC_009708.1 Protein Homology CDS 2527043 2527549 . - 0 ID=cds2157;Parent=gene2222;Dbxref=Genbank:WP_041175770.1;Name=WP_041175770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175770.1;transl_table=11 NC_009708.1 RefSeq gene 2527623 2527868 . - . ID=gene2223;Name=YPSIP31758_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12345 NC_009708.1 Protein Homology CDS 2527623 2527868 . - 0 ID=cds2158;Parent=gene2223;Dbxref=Genbank:WP_041175771.1;Name=WP_041175771.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_041175771.1;transl_table=11 NC_009708.1 RefSeq gene 2528182 2528571 . + . ID=gene2224;Name=YPSIP31758_RS12350;end_range=2528571,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12350;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 2528182 2528571 . + 0 ID=cds2159;Parent=gene2224;end_range=2528571,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2529153 2529625 . - . ID=gene2225;Name=YPSIP31758_RS12355;end_range=2529625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12355;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 2529153 2529625 . - 0 ID=cds2160;Parent=gene2225;end_range=2529625,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 2529596 2529760 . + . ID=id211;gbkey=repeat_region NC_009708.1 RefSeq gene 2529677 2529901 . - . ID=gene2226;Name=YPSIP31758_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12360;old_locus_tag=YpsIP31758_2211 NC_009708.1 Protein Homology CDS 2529677 2529901 . - 0 ID=cds2161;Parent=gene2226;Dbxref=Genbank:WP_012105222.1;Name=WP_012105222.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105222.1;transl_table=11 NC_009708.1 RefSeq gene 2529909 2530559 . - . ID=gene2227;Name=YPSIP31758_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22570;old_locus_tag=YpsIP31758_2212 NC_009708.1 Protein Homology CDS 2529909 2530559 . - 0 ID=cds2162;Parent=gene2227;Dbxref=Genbank:WP_012105223.1;Name=WP_012105223.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105223.1;transl_table=11 NC_009708.1 RefSeq gene 2530850 2531008 . + . ID=gene2228;Name=YPSIP31758_RS22575;end_range=2531008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22575;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 2530850 2531008 . + 0 ID=cds2163;Parent=gene2228;end_range=2531008,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2531255 2531710 . + . ID=gene2229;Name=YPSIP31758_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12375;old_locus_tag=YpsIP31758_2214 NC_009708.1 Protein Homology CDS 2531255 2531710 . + 0 ID=cds2164;Parent=gene2229;Dbxref=Genbank:WP_012105225.1;Name=WP_012105225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105225.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2531711 2531875 . + . ID=id212;gbkey=repeat_region NC_009708.1 RefSeq gene 2531956 2532345 . - . ID=gene2230;Name=YPSIP31758_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12380;old_locus_tag=YpsIP31758_2216 NC_009708.1 Protein Homology CDS 2531956 2532345 . - 0 ID=cds2165;Parent=gene2230;Dbxref=Genbank:WP_012105227.1;Name=WP_012105227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105227.1;transl_table=11 NC_009708.1 RefSeq gene 2532348 2532752 . - . ID=gene2231;Name=YPSIP31758_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12385;old_locus_tag=YpsIP31758_2217 NC_009708.1 Protein Homology CDS 2532348 2532752 . - 0 ID=cds2166;Parent=gene2231;Dbxref=Genbank:WP_012105228.1;Name=WP_012105228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105228.1;transl_table=11 NC_009708.1 RefSeq gene 2532759 2533916 . - . ID=gene2232;Name=YPSIP31758_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12390;old_locus_tag=YpsIP31758_2218 NC_009708.1 Protein Homology CDS 2532759 2533916 . - 0 ID=cds2167;Parent=gene2232;Dbxref=Genbank:WP_012105229.1;Name=WP_012105229.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105229.1;transl_table=11 NC_009708.1 RefSeq gene 2533900 2534460 . - . ID=gene2233;Name=YPSIP31758_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12395;old_locus_tag=YpsIP31758_2219 NC_009708.1 Protein Homology CDS 2533900 2534460 . - 0 ID=cds2168;Parent=gene2233;Dbxref=Genbank:WP_012105230.1;Name=WP_012105230.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105230.1;transl_table=11 NC_009708.1 RefSeq gene 2534460 2534879 . - . ID=gene2234;Name=YPSIP31758_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12400;old_locus_tag=YpsIP31758_2220 NC_009708.1 Protein Homology CDS 2534460 2534879 . - 0 ID=cds2169;Parent=gene2234;Dbxref=Genbank:WP_012105231.1;Name=WP_012105231.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105231.1;transl_table=11 NC_009708.1 RefSeq gene 2534882 2535538 . - . ID=gene2235;Name=YPSIP31758_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12405;old_locus_tag=YpsIP31758_2221 NC_009708.1 Protein Homology CDS 2534882 2535538 . - 0 ID=cds2170;Parent=gene2235;Dbxref=Genbank:WP_012105232.1;Name=WP_012105232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105232.1;transl_table=11 NC_009708.1 RefSeq gene 2535538 2536737 . - . ID=gene2236;Name=YPSIP31758_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12410;old_locus_tag=YpsIP31758_2222 NC_009708.1 Protein Homology CDS 2535538 2536737 . - 0 ID=cds2171;Parent=gene2236;Dbxref=Genbank:WP_012105233.1;Name=WP_012105233.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105233.1;transl_table=11 NC_009708.1 RefSeq gene 2536749 2537498 . - . ID=gene2237;Name=YPSIP31758_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12415;old_locus_tag=YpsIP31758_2223 NC_009708.1 Protein Homology CDS 2536749 2537498 . - 0 ID=cds2172;Parent=gene2237;Dbxref=Genbank:WP_041175772.1;Name=WP_041175772.1;gbkey=CDS;product=phage head morphogenesis protein;protein_id=WP_041175772.1;transl_table=11 NC_009708.1 RefSeq gene 2537557 2538942 . - . ID=gene2238;Name=YPSIP31758_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12420;old_locus_tag=YpsIP31758_2224 NC_009708.1 Protein Homology CDS 2537557 2538942 . - 0 ID=cds2173;Parent=gene2238;Dbxref=Genbank:WP_012105235.1;Name=WP_012105235.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105235.1;transl_table=11 NC_009708.1 RefSeq gene 2538945 2540588 . - . ID=gene2239;Name=YPSIP31758_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12425;old_locus_tag=YpsIP31758_2225 NC_009708.1 Protein Homology CDS 2538945 2540588 . - 0 ID=cds2174;Parent=gene2239;Dbxref=Genbank:WP_012105236.1;Name=WP_012105236.1;gbkey=CDS;product=phage protein;protein_id=WP_012105236.1;transl_table=11 NC_009708.1 RefSeq gene 2540715 2540954 . + . ID=gene2240;Name=YPSIP31758_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12430;old_locus_tag=YpsIP31758_2226 NC_009708.1 Protein Homology CDS 2540715 2540954 . + 0 ID=cds2175;Parent=gene2240;Dbxref=Genbank:WP_012105237.1;Name=WP_012105237.1;Note=Qin prophage%3B bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105237.1;transl_table=11 NC_009708.1 RefSeq gene 2540944 2541228 . + . ID=gene2241;Name=YPSIP31758_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12435;old_locus_tag=YpsIP31758_2227 NC_009708.1 Protein Homology CDS 2540944 2541228 . + 0 ID=cds2176;Parent=gene2241;Dbxref=Genbank:WP_012105238.1;Name=WP_012105238.1;gbkey=CDS;product=RelE toxin;protein_id=WP_012105238.1;transl_table=11 NC_009708.1 RefSeq gene 2541239 2542255 . - . ID=gene2242;Name=YPSIP31758_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12440;old_locus_tag=YpsIP31758_2228 NC_009708.1 Protein Homology CDS 2541239 2542255 . - 0 ID=cds2177;Parent=gene2242;Dbxref=Genbank:WP_012105239.1;Name=WP_012105239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105239.1;transl_table=11 NC_009708.1 RefSeq gene 2542259 2542519 . - . ID=gene2243;Name=YPSIP31758_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12445;old_locus_tag=YpsIP31758_2229 NC_009708.1 Protein Homology CDS 2542259 2542519 . - 0 ID=cds2178;Parent=gene2243;Dbxref=Genbank:WP_012105240.1;Name=WP_012105240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105240.1;transl_table=11 NC_009708.1 RefSeq gene 2542522 2543136 . - . ID=gene2244;Name=YPSIP31758_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12450;old_locus_tag=YpsIP31758_2230 NC_009708.1 Protein Homology CDS 2542522 2543136 . - 0 ID=cds2179;Parent=gene2244;Dbxref=Genbank:WP_012105241.1;Name=WP_012105241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105241.1;transl_table=11 NC_009708.1 RefSeq gene 2543133 2543642 . - . ID=gene2245;Name=YPSIP31758_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12455;old_locus_tag=YpsIP31758_2231 NC_009708.1 Protein Homology CDS 2543133 2543642 . - 0 ID=cds2180;Parent=gene2245;Dbxref=Genbank:WP_012105242.1;Name=WP_012105242.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_012105242.1;transl_table=11 NC_009708.1 RefSeq gene 2544101 2544319 . + . ID=gene2246;Name=YPSIP31758_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12460;old_locus_tag=YpsIP31758_2233 NC_009708.1 Protein Homology CDS 2544101 2544319 . + 0 ID=cds2181;Parent=gene2246;Dbxref=Genbank:WP_012105244.1;Name=WP_012105244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105244.1;transl_table=11 NC_009708.1 RefSeq gene 2544367 2544603 . + . ID=gene2247;Name=YPSIP31758_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12465;old_locus_tag=YpsIP31758_2234 NC_009708.1 Protein Homology CDS 2544367 2544603 . + 0 ID=cds2182;Parent=gene2247;Dbxref=Genbank:WP_041175868.1;Name=WP_041175868.1;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_041175868.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2544621 2544795 . + . ID=id213;gbkey=repeat_region NC_009708.1 RefSeq gene 2544820 2545089 . - . ID=gene2248;Name=YPSIP31758_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12470 NC_009708.1 Protein Homology CDS 2544820 2545089 . - 0 ID=cds2183;Parent=gene2248;Dbxref=Genbank:WP_041175773.1;Name=WP_041175773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175773.1;transl_table=11 NC_009708.1 RefSeq gene 2545388 2545651 . - . ID=gene2249;Name=YPSIP31758_RS12475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12475;partial=true;pseudo=true;start_range=.,2545388 NC_009708.1 Protein Homology CDS 2545388 2545651 . - 0 ID=cds2184;Parent=gene2249;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=lysozyme;pseudo=true;start_range=.,2545388;transl_table=11 NC_009708.1 RefSeq gene 2545651 2545866 . - . ID=gene2250;Name=YPSIP31758_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12480 NC_009708.1 Protein Homology CDS 2545651 2545866 . - 0 ID=cds2185;Parent=gene2250;Dbxref=Genbank:WP_041175774.1;Name=WP_041175774.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_041175774.1;transl_table=11 NC_009708.1 RefSeq gene 2546146 2546373 . + . ID=gene2251;Name=YPSIP31758_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12485;old_locus_tag=YpsIP31758_2237 NC_009708.1 Protein Homology CDS 2546146 2546373 . + 0 ID=cds2186;Parent=gene2251;Dbxref=Genbank:WP_012105248.1;Name=WP_012105248.1;gbkey=CDS;product=prevent-host-death protein;protein_id=WP_012105248.1;transl_table=11 NC_009708.1 RefSeq gene 2546397 2546750 . + . ID=gene2252;Name=YPSIP31758_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12490;old_locus_tag=YpsIP31758_2238 NC_009708.1 Protein Homology CDS 2546397 2546750 . + 0 ID=cds2187;Parent=gene2252;Dbxref=Genbank:WP_012105249.1;Name=WP_012105249.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_012105249.1;transl_table=11 NC_009708.1 RefSeq gene 2546909 2547355 . - . ID=gene2253;Name=YPSIP31758_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12495;old_locus_tag=YpsIP31758_2239 NC_009708.1 Protein Homology CDS 2546909 2547355 . - 0 ID=cds2188;Parent=gene2253;Dbxref=Genbank:WP_012105250.1;Name=WP_012105250.1;gbkey=CDS;product=antitermination protein;protein_id=WP_012105250.1;transl_table=11 NC_009708.1 RefSeq gene 2547352 2547636 . - . ID=gene2254;Name=YPSIP31758_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12500 NC_009708.1 Protein Homology CDS 2547352 2547636 . - 0 ID=cds2189;Parent=gene2254;Dbxref=Genbank:WP_041175775.1;Name=WP_041175775.1;gbkey=CDS;product=phage protein;protein_id=WP_041175775.1;transl_table=11 NC_009708.1 RefSeq gene 2547645 2548238 . - . ID=gene2255;Name=YPSIP31758_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12505;old_locus_tag=YpsIP31758_2240 NC_009708.1 Protein Homology CDS 2547645 2548238 . - 0 ID=cds2190;Parent=gene2255;Dbxref=Genbank:WP_012105251.1;Name=WP_012105251.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105251.1;transl_table=11 NC_009708.1 RefSeq gene 2549026 2549367 . + . ID=gene2256;Name=YPSIP31758_RS12510;end_range=2549367,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12510;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 2549026 2549367 . + 0 ID=cds2191;Parent=gene2256;end_range=2549367,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hemolysin;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2549396 2549539 . + . ID=gene2257;Name=YPSIP31758_RS12515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12515;pseudo=true NC_009708.1 Protein Homology CDS 2549396 2549539 . + 0 ID=cds2192;Parent=gene2257;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2549459..2549461%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 2549765 2550505 . - . ID=gene2258;Name=YPSIP31758_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12520;old_locus_tag=YpsIP31758_2241 NC_009708.1 Protein Homology CDS 2549765 2550505 . - 0 ID=cds2193;Parent=gene2258;Dbxref=Genbank:WP_012105252.1;Name=WP_012105252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105252.1;transl_table=11 NC_009708.1 RefSeq gene 2550750 2550872 . - . ID=gene2259;Name=YPSIP31758_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12525 NC_009708.1 Protein Homology CDS 2550750 2550872 . - 0 ID=cds2194;Parent=gene2259;Dbxref=Genbank:WP_002213228.1;Name=WP_002213228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213228.1;transl_table=11 NC_009708.1 RefSeq gene 2550939 2551181 . - . ID=gene2260;Name=YPSIP31758_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12530;old_locus_tag=YpsIP31758_2243 NC_009708.1 Protein Homology CDS 2550939 2551181 . - 0 ID=cds2195;Parent=gene2260;Dbxref=Genbank:WP_012105254.1;Name=WP_012105254.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105254.1;transl_table=11 NC_009708.1 RefSeq gene 2551271 2551498 . - . ID=gene2261;Name=YPSIP31758_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12535 NC_009708.1 Protein Homology CDS 2551271 2551498 . - 0 ID=cds2196;Parent=gene2261;Dbxref=Genbank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002215401.1;transl_table=11 NC_009708.1 RefSeq gene 2552641 2553684 . - . ID=gene2262;Name=YPSIP31758_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12540;old_locus_tag=YpsIP31758_2245 NC_009708.1 Protein Homology CDS 2552641 2553684 . - 0 ID=cds2197;Parent=gene2262;Dbxref=Genbank:WP_012105256.1;Name=WP_012105256.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105256.1;transl_table=11 NC_009708.1 RefSeq gene 2553687 2553911 . - . ID=gene2263;Name=YPSIP31758_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12545 NC_009708.1 Protein Homology CDS 2553687 2553911 . - 0 ID=cds2198;Parent=gene2263;Dbxref=Genbank:WP_041175776.1;Name=WP_041175776.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_041175776.1;transl_table=11 NC_009708.1 RefSeq gene 2553928 2554392 . - . ID=gene2264;Name=YPSIP31758_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12550;old_locus_tag=YpsIP31758_2246 NC_009708.1 Protein Homology CDS 2553928 2554392 . - 0 ID=cds2199;Parent=gene2264;Dbxref=Genbank:WP_012105257.1;Name=WP_012105257.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105257.1;transl_table=11 NC_009708.1 RefSeq gene 2554426 2554632 . - . ID=gene2265;Name=YPSIP31758_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12555;old_locus_tag=YpsIP31758_2247 NC_009708.1 Protein Homology CDS 2554426 2554632 . - 0 ID=cds2200;Parent=gene2265;Dbxref=Genbank:WP_012105258.1;Name=WP_012105258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105258.1;transl_table=11 NC_009708.1 RefSeq gene 2554736 2555386 . + . ID=gene2266;Name=YPSIP31758_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12560;old_locus_tag=YpsIP31758_2248 NC_009708.1 Protein Homology CDS 2554736 2555386 . + 0 ID=cds2201;Parent=gene2266;Dbxref=Genbank:WP_041175872.1;Name=WP_041175872.1;gbkey=CDS;product=repressor;protein_id=WP_041175872.1;transl_table=11 NC_009708.1 RefSeq gene 2555727 2555963 . + . ID=gene2267;Name=YPSIP31758_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12565;old_locus_tag=YpsIP31758_2249 NC_009708.1 Protein Homology CDS 2555727 2555963 . + 0 ID=cds2202;Parent=gene2267;Dbxref=Genbank:WP_012105260.1;Name=WP_012105260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105260.1;transl_table=11 NC_009708.1 RefSeq gene 2555953 2556969 . + . ID=gene2268;Name=YPSIP31758_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12570;old_locus_tag=YpsIP31758_2250 NC_009708.1 Protein Homology CDS 2555953 2556969 . + 0 ID=cds2203;Parent=gene2268;Dbxref=Genbank:WP_012105261.1;Name=WP_012105261.1;gbkey=CDS;product=integrase;protein_id=WP_012105261.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2557040 2557163 . + . ID=id214;gbkey=repeat_region NC_009708.1 RefSeq gene 2557109 2557194 . - . ID=gene2269;Name=YPSIP31758_RS12575;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS12575;old_locus_tag=YpsIP31758_4236 NC_009708.1 tRNAscan-SE tRNA 2557109 2557194 . - . ID=rna62;Parent=gene2269;anticodon=(pos:complement(2557158..2557160));gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 2557109 2557194 . - . ID=id215;Parent=rna62;anticodon=(pos:complement(2557158..2557160));gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 2557205 2557278 . - . ID=gene2270;Name=YPSIP31758_RS12580;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS12580;old_locus_tag=YpsIP31758_4237 NC_009708.1 tRNAscan-SE tRNA 2557205 2557278 . - . ID=rna63;Parent=gene2270;anticodon=(pos:complement(2557244..2557246));gbkey=tRNA;product=tRNA-Cys NC_009708.1 tRNAscan-SE exon 2557205 2557278 . - . ID=id216;Parent=rna63;anticodon=(pos:complement(2557244..2557246));gbkey=tRNA;product=tRNA-Cys NC_009708.1 RefSeq gene 2557331 2557406 . - . ID=gene2271;Name=YPSIP31758_RS12585;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS12585;old_locus_tag=YpsIP31758_4238 NC_009708.1 tRNAscan-SE tRNA 2557331 2557406 . - . ID=rna64;Parent=gene2271;anticodon=(pos:complement(2557371..2557373));gbkey=tRNA;product=tRNA-Gly NC_009708.1 tRNAscan-SE exon 2557331 2557406 . - . ID=id217;Parent=rna64;anticodon=(pos:complement(2557371..2557373));gbkey=tRNA;product=tRNA-Gly NC_009708.1 RefSeq gene 2557551 2558099 . - . ID=gene2272;Name=YPSIP31758_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12590;old_locus_tag=YpsIP31758_2251 NC_009708.1 Protein Homology CDS 2557551 2558099 . - 0 ID=cds2204;Parent=gene2272;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NC_009708.1 RefSeq gene 2558158 2559990 . - . ID=gene2273;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12595;old_locus_tag=YpsIP31758_2252 NC_009708.1 Protein Homology CDS 2558158 2559990 . - 0 ID=cds2205;Parent=gene2273;Dbxref=Genbank:WP_002220477.1;Name=WP_002220477.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_002220477.1;transl_table=11 NC_009708.1 RefSeq gene 2559983 2560639 . - . ID=gene2274;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=YPSIP31758_RS12600;old_locus_tag=YpsIP31758_2253 NC_009708.1 Protein Homology CDS 2559983 2560639 . - 0 ID=cds2206;Parent=gene2274;Dbxref=Genbank:WP_002211176.1;Name=WP_002211176.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_002211176.1;transl_table=11 NC_009708.1 RefSeq gene 2561303 2561527 . + . ID=gene2275;Name=YPSIP31758_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12605;old_locus_tag=YpsIP31758_2254 NC_009708.1 Protein Homology CDS 2561303 2561527 . + 0 ID=cds2207;Parent=gene2275;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11 NC_009708.1 RefSeq gene 2561655 2561996 . + . ID=gene2276;Name=YPSIP31758_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12610;old_locus_tag=YpsIP31758_2255 NC_009708.1 Protein Homology CDS 2561655 2561996 . + 0 ID=cds2208;Parent=gene2276;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11 NC_009708.1 RefSeq gene 2562024 2562278 . - . ID=gene2277;Name=YPSIP31758_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12615;old_locus_tag=YpsIP31758_2256 NC_009708.1 Protein Homology CDS 2562024 2562278 . - 0 ID=cds2209;Parent=gene2277;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11 NC_009708.1 RefSeq gene 2562619 2563170 . - . ID=gene2278;Name=YPSIP31758_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12620;old_locus_tag=YpsIP31758_2257 NC_009708.1 Protein Homology CDS 2562619 2563170 . - 0 ID=cds2210;Parent=gene2278;Dbxref=Genbank:WP_012105262.1;Name=WP_012105262.1;gbkey=CDS;product=attachment protein;protein_id=WP_012105262.1;transl_table=11 NC_009708.1 RefSeq gene 2563857 2563932 . - . ID=gene2279;Name=YPSIP31758_RS12625;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS12625;old_locus_tag=YpsIP31758_4239 NC_009708.1 tRNAscan-SE tRNA 2563857 2563932 . - . ID=rna65;Parent=gene2279;anticodon=(pos:complement(2563897..2563899));gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 2563857 2563932 . - . ID=id218;Parent=rna65;anticodon=(pos:complement(2563897..2563899));gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq gene 2564285 2565709 . + . ID=gene2280;Name=YPSIP31758_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12630;old_locus_tag=YpsIP31758_2259 NC_009708.1 Protein Homology CDS 2564285 2565709 . + 0 ID=cds2211;Parent=gene2280;Dbxref=Genbank:WP_011192195.1;Name=WP_011192195.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_011192195.1;transl_table=11 NC_009708.1 RefSeq gene 2565835 2567013 . - . ID=gene2281;Name=YPSIP31758_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12635;old_locus_tag=YpsIP31758_2260 NC_009708.1 Protein Homology CDS 2565835 2567013 . - 0 ID=cds2212;Parent=gene2281;Dbxref=Genbank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11 NC_009708.1 RefSeq gene 2567407 2568006 . + . ID=gene2282;Name=YPSIP31758_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12640;old_locus_tag=YpsIP31758_2261 NC_009708.1 Protein Homology CDS 2567407 2568006 . + 0 ID=cds2213;Parent=gene2282;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11 NC_009708.1 RefSeq gene 2568092 2569396 . - . ID=gene2283;Name=YPSIP31758_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12645;old_locus_tag=YpsIP31758_2262 NC_009708.1 Protein Homology CDS 2568092 2569396 . - 0 ID=cds2214;Parent=gene2283;Dbxref=Genbank:WP_002211167.1;Name=WP_002211167.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_002211167.1;transl_table=11 NC_009708.1 RefSeq gene 2569407 2570537 . - . ID=gene2284;Name=YPSIP31758_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12650;old_locus_tag=YpsIP31758_2263 NC_009708.1 Protein Homology CDS 2569407 2570537 . - 0 ID=cds2215;Parent=gene2284;Dbxref=Genbank:WP_012105265.1;Name=WP_012105265.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_012105265.1;transl_table=11 NC_009708.1 RefSeq gene 2570567 2571415 . - . ID=gene2285;Name=YPSIP31758_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12655;old_locus_tag=YpsIP31758_2264 NC_009708.1 Protein Homology CDS 2570567 2571415 . - 0 ID=cds2216;Parent=gene2285;Dbxref=Genbank:WP_012105266.1;Name=WP_012105266.1;gbkey=CDS;product=iron permease;protein_id=WP_012105266.1;transl_table=11 NC_009708.1 RefSeq gene 2571766 2573250 . - . ID=gene2286;Name=YPSIP31758_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12660;old_locus_tag=YpsIP31758_2265 NC_009708.1 Protein Homology CDS 2571766 2573250 . - 0 ID=cds2217;Parent=gene2286;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11 NC_009708.1 RefSeq gene 2573280 2573450 . - . ID=gene2287;Name=YPSIP31758_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12665;old_locus_tag=YpsIP31758_2266 NC_009708.1 Protein Homology CDS 2573280 2573450 . - 0 ID=cds2218;Parent=gene2287;Dbxref=Genbank:WP_012105267.1;Name=WP_012105267.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105267.1;transl_table=11 NC_009708.1 RefSeq gene 2573823 2577794 . + . ID=gene2288;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12670;old_locus_tag=YpsIP31758_2268 NC_009708.1 Protein Homology CDS 2573823 2577794 . + 0 ID=cds2219;Parent=gene2288;Dbxref=Genbank:WP_002224448.1;Name=WP_002224448.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=WP_002224448.1;transl_table=11 NC_009708.1 RefSeq gene 2578348 2578641 . + . ID=gene2289;Name=YPSIP31758_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12675;old_locus_tag=YpsIP31758_2269 NC_009708.1 Protein Homology CDS 2578348 2578641 . + 0 ID=cds2220;Parent=gene2289;Dbxref=Genbank:WP_002211161.1;Name=WP_002211161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211161.1;transl_table=11 NC_009708.1 RefSeq gene 2578641 2579012 . + . ID=gene2290;Name=YPSIP31758_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12680;old_locus_tag=YpsIP31758_2270 NC_009708.1 Protein Homology CDS 2578641 2579012 . + 0 ID=cds2221;Parent=gene2290;Dbxref=Genbank:WP_002223875.1;Name=WP_002223875.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002223875.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2579146 2579316 . + . ID=id219;gbkey=repeat_region NC_009708.1 RefSeq gene 2579304 2580065 . - . ID=gene2291;Name=YPSIP31758_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12685;old_locus_tag=YpsIP31758_2272 NC_009708.1 Protein Homology CDS 2579304 2580065 . - 0 ID=cds2222;Parent=gene2291;Dbxref=Genbank:WP_002211159.1;Name=WP_002211159.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211159.1;transl_table=11 NC_009708.1 RefSeq gene 2580068 2580730 . - . ID=gene2292;Name=YPSIP31758_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12690;old_locus_tag=YpsIP31758_2273 NC_009708.1 Protein Homology CDS 2580068 2580730 . - 0 ID=cds2223;Parent=gene2292;Dbxref=Genbank:WP_011192190.1;Name=WP_011192190.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_011192190.1;transl_table=11 NC_009708.1 RefSeq gene 2580730 2581530 . - . ID=gene2293;Name=YPSIP31758_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12695;old_locus_tag=YpsIP31758_2274 NC_009708.1 Protein Homology CDS 2580730 2581530 . - 0 ID=cds2224;Parent=gene2293;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11 NC_009708.1 RefSeq gene 2581654 2582646 . - . ID=gene2294;Name=YPSIP31758_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12700;old_locus_tag=YpsIP31758_2275 NC_009708.1 Protein Homology CDS 2581654 2582646 . - 0 ID=cds2225;Parent=gene2294;Dbxref=Genbank:WP_011192189.1;Name=WP_011192189.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_011192189.1;transl_table=11 NC_009708.1 RefSeq gene 2582935 2583444 . - . ID=gene2295;Name=YPSIP31758_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12705;old_locus_tag=YpsIP31758_2278 NC_009708.1 Protein Homology CDS 2582935 2583444 . - 0 ID=cds2226;Parent=gene2295;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11 NC_009708.1 RefSeq gene 2583679 2584401 . - . ID=gene2296;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12710;old_locus_tag=YpsIP31758_2280 NC_009708.1 Protein Homology CDS 2583679 2584401 . - 0 ID=cds2227;Parent=gene2296;Dbxref=Genbank:WP_011192188.1;Name=WP_011192188.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_011192188.1;transl_table=11 NC_009708.1 RefSeq gene 2584748 2585857 . - . ID=gene2297;Name=YPSIP31758_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12715;old_locus_tag=YpsIP31758_2281 NC_009708.1 Protein Homology CDS 2584748 2585857 . - 0 ID=cds2228;Parent=gene2297;Dbxref=Genbank:WP_002211152.1;Name=WP_002211152.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002211152.1;transl_table=11 NC_009708.1 RefSeq gene 2586154 2587554 . + . ID=gene2298;Name=YPSIP31758_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12720;old_locus_tag=YpsIP31758_2283 NC_009708.1 Protein Homology CDS 2586154 2587554 . + 0 ID=cds2229;Parent=gene2298;Dbxref=Genbank:WP_012105272.1;Name=WP_012105272.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_012105272.1;transl_table=11 NC_009708.1 RefSeq gene 2587565 2587963 . + . ID=gene2299;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12725;old_locus_tag=YpsIP31758_2284 NC_009708.1 Protein Homology CDS 2587565 2587963 . + 0 ID=cds2230;Parent=gene2299;Dbxref=Genbank:WP_011192186.1;Name=WP_011192186.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_011192186.1;transl_table=11 NC_009708.1 RefSeq gene 2587974 2588336 . + . ID=gene2300;Name=YPSIP31758_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12730;old_locus_tag=YpsIP31758_2285 NC_009708.1 Protein Homology CDS 2587974 2588336 . + 0 ID=cds2231;Parent=gene2300;Dbxref=Genbank:WP_011192185.1;Name=WP_011192185.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_011192185.1;transl_table=11 NC_009708.1 RefSeq gene 2588391 2588630 . + . ID=gene2301;Name=YPSIP31758_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12735 NC_009708.1 Protein Homology CDS 2588391 2588630 . + 0 ID=cds2232;Parent=gene2301;Dbxref=Genbank:WP_002215994.1;Name=WP_002215994.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215994.1;transl_table=11 NC_009708.1 RefSeq gene 2588637 2589512 . + . ID=gene2302;Name=YPSIP31758_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12740;old_locus_tag=YpsIP31758_2286 NC_009708.1 Protein Homology CDS 2588637 2589512 . + 0 ID=cds2233;Parent=gene2302;Dbxref=Genbank:WP_012105273.1;Name=WP_012105273.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_012105273.1;transl_table=11 NC_009708.1 RefSeq gene 2589866 2592820 . + . ID=gene2303;Name=YPSIP31758_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12745;old_locus_tag=YpsIP31758_2287 NC_009708.1 Protein Homology CDS 2589866 2592820 . + 0 ID=cds2234;Parent=gene2303;Dbxref=Genbank:WP_011192184.1;Name=WP_011192184.1;gbkey=CDS;product=metal-dependent phosphohydrolase;protein_id=WP_011192184.1;transl_table=11 NC_009708.1 RefSeq gene 2592981 2593592 . + . ID=gene2304;Name=YPSIP31758_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12750;old_locus_tag=YpsIP31758_2288 NC_009708.1 Protein Homology CDS 2592981 2593592 . + 0 ID=cds2235;Parent=gene2304;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11 NC_009708.1 RefSeq gene 2593778 2594254 . - . ID=gene2305;Name=YPSIP31758_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12755 NC_009708.1 Protein Homology CDS 2593778 2594254 . - 0 ID=cds2236;Parent=gene2305;Dbxref=Genbank:WP_002215992.1;Name=WP_002215992.1;gbkey=CDS;product=death-on-curing family protein;protein_id=WP_002215992.1;transl_table=11 NC_009708.1 RefSeq gene 2594265 2594444 . - . ID=gene2306;Name=YPSIP31758_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12760 NC_009708.1 Protein Homology CDS 2594265 2594444 . - 0 ID=cds2237;Parent=gene2306;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2594765 2594923 . + . ID=id220;gbkey=repeat_region NC_009708.1 RefSeq gene 2594960 2595271 . - . ID=gene2307;Name=YPSIP31758_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12765;old_locus_tag=YpsIP31758_2289 NC_009708.1 Protein Homology CDS 2594960 2595271 . - 0 ID=cds2238;Parent=gene2307;Dbxref=Genbank:WP_002211144.1;Name=WP_002211144.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NC_009708.1 RefSeq gene 2595624 2597336 . + . ID=gene2308;Name=YPSIP31758_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12770;old_locus_tag=YpsIP31758_2290 NC_009708.1 Protein Homology CDS 2595624 2597336 . + 0 ID=cds2239;Parent=gene2308;Dbxref=Genbank:WP_002211143.1;Name=WP_002211143.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_002211143.1;transl_table=11 NC_009708.1 RefSeq gene 2597333 2598325 . + . ID=gene2309;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12775;old_locus_tag=YpsIP31758_2291 NC_009708.1 Protein Homology CDS 2597333 2598325 . + 0 ID=cds2240;Parent=gene2309;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NC_009708.1 RefSeq gene 2598318 2599034 . + . ID=gene2310;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12780;old_locus_tag=YpsIP31758_2292 NC_009708.1 Protein Homology CDS 2598318 2599034 . + 0 ID=cds2241;Parent=gene2310;Dbxref=Genbank:WP_002211141.1;Name=WP_002211141.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_002211141.1;transl_table=11 NC_009708.1 RefSeq gene 2599034 2600452 . + . ID=gene2311;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12785;old_locus_tag=YpsIP31758_2293 NC_009708.1 Protein Homology CDS 2599034 2600452 . + 0 ID=cds2242;Parent=gene2311;Dbxref=Genbank:WP_012105274.1;Name=WP_012105274.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_012105274.1;transl_table=11 NC_009708.1 RefSeq gene 2600563 2601009 . + . ID=gene2312;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12790;old_locus_tag=YpsIP31758_2294 NC_009708.1 Protein Homology CDS 2600563 2601009 . + 0 ID=cds2243;Parent=gene2312;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11 NC_009708.1 RefSeq gene 2601006 2602364 . + . ID=gene2313;Name=YPSIP31758_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12795;old_locus_tag=YpsIP31758_2295 NC_009708.1 Protein Homology CDS 2601006 2602364 . + 0 ID=cds2244;Parent=gene2313;Dbxref=Genbank:WP_012105275.1;Name=WP_012105275.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_012105275.1;transl_table=11 NC_009708.1 RefSeq gene 2602631 2603101 . + . ID=gene2314;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12800;old_locus_tag=YpsIP31758_2298 NC_009708.1 Protein Homology CDS 2602631 2603101 . + 0 ID=cds2245;Parent=gene2314;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11 NC_009708.1 RefSeq gene 2603107 2604108 . + . ID=gene2315;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12805;old_locus_tag=YpsIP31758_2299 NC_009708.1 Protein Homology CDS 2603107 2604108 . + 0 ID=cds2246;Parent=gene2315;Dbxref=Genbank:WP_011192177.1;Name=WP_011192177.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_011192177.1;transl_table=11 NC_009708.1 RefSeq gene 2604105 2604521 . + . ID=gene2316;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12810;old_locus_tag=YpsIP31758_2300 NC_009708.1 Protein Homology CDS 2604105 2604521 . + 0 ID=cds2247;Parent=gene2316;Dbxref=Genbank:WP_011192176.1;Name=WP_011192176.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_011192176.1;transl_table=11 NC_009708.1 RefSeq gene 2604521 2605057 . + . ID=gene2317;Name=YPSIP31758_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12815;old_locus_tag=YpsIP31758_2301 NC_009708.1 Protein Homology CDS 2604521 2605057 . + 0 ID=cds2248;Parent=gene2317;Dbxref=Genbank:WP_012105277.1;Name=WP_012105277.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_012105277.1;transl_table=11 NC_009708.1 RefSeq gene 2605138 2605878 . + . ID=gene2318;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12820;old_locus_tag=YpsIP31758_2302 NC_009708.1 Protein Homology CDS 2605138 2605878 . + 0 ID=cds2249;Parent=gene2318;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11 NC_009708.1 RefSeq gene 2605984 2606253 . + . ID=gene2319;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12825;old_locus_tag=YpsIP31758_2303 NC_009708.1 Protein Homology CDS 2605984 2606253 . + 0 ID=cds2250;Parent=gene2319;Dbxref=Genbank:WP_002211131.1;Name=WP_002211131.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NC_009708.1 RefSeq gene 2606256 2607038 . + . ID=gene2320;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12830;old_locus_tag=YpsIP31758_2304 NC_009708.1 Protein Homology CDS 2606256 2607038 . + 0 ID=cds2251;Parent=gene2320;Dbxref=Genbank:WP_011192174.1;Name=WP_011192174.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_011192174.1;transl_table=11 NC_009708.1 RefSeq gene 2607245 2607427 . + . ID=gene2321;Name=YPSIP31758_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12835 NC_009708.1 Protein Homology CDS 2607245 2607427 . + 0 ID=cds2252;Parent=gene2321;Dbxref=Genbank:WP_002214976.1;Name=WP_002214976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214976.1;transl_table=11 NC_009708.1 RefSeq gene 2607472 2607891 . + . ID=gene2322;Name=YPSIP31758_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12840;old_locus_tag=YpsIP31758_2305 NC_009708.1 Protein Homology CDS 2607472 2607891 . + 0 ID=cds2253;Parent=gene2322;Dbxref=Genbank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211129.1;transl_table=11 NC_009708.1 RefSeq gene 2608151 2609110 . - . ID=gene2323;Name=YPSIP31758_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12845;old_locus_tag=YpsIP31758_2306 NC_009708.1 Protein Homology CDS 2608151 2609110 . - 0 ID=cds2254;Parent=gene2323;Dbxref=Genbank:WP_012105278.1;Name=WP_012105278.1;gbkey=CDS;product=PfkB family kinase;protein_id=WP_012105278.1;transl_table=11 NC_009708.1 RefSeq gene 2609159 2610181 . - . ID=gene2324;Name=YPSIP31758_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12850;old_locus_tag=YpsIP31758_2307 NC_009708.1 Protein Homology CDS 2609159 2610181 . - 0 ID=cds2255;Parent=gene2324;Dbxref=Genbank:WP_011192171.1;Name=WP_011192171.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011192171.1;transl_table=11 NC_009708.1 RefSeq gene 2610184 2611761 . - . ID=gene2325;Name=YPSIP31758_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12855;old_locus_tag=YpsIP31758_2308 NC_009708.1 Protein Homology CDS 2610184 2611761 . - 0 ID=cds2256;Parent=gene2325;Dbxref=Genbank:WP_012105279.1;Name=WP_012105279.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105279.1;transl_table=11 NC_009708.1 RefSeq gene 2611827 2612822 . - . ID=gene2326;Name=YPSIP31758_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12860;old_locus_tag=YpsIP31758_2309 NC_009708.1 Protein Homology CDS 2611827 2612822 . - 0 ID=cds2257;Parent=gene2326;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11 NC_009708.1 RefSeq gene 2612865 2613944 . - . ID=gene2327;Name=YPSIP31758_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12865;old_locus_tag=YpsIP31758_2310 NC_009708.1 Protein Homology CDS 2612865 2613944 . - 0 ID=cds2258;Parent=gene2327;Dbxref=Genbank:WP_012304219.1;Name=WP_012304219.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012304219.1;transl_table=11 NC_009708.1 RefSeq gene 2614074 2616140 . - . ID=gene2328;Name=YPSIP31758_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12870;old_locus_tag=YpsIP31758_2311 NC_009708.1 Protein Homology CDS 2614074 2616140 . - 0 ID=cds2259;Parent=gene2328;Dbxref=Genbank:WP_012105281.1;Name=WP_012105281.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_012105281.1;transl_table=11 NC_009708.1 RefSeq gene 2616358 2617359 . + . ID=gene2329;Name=YPSIP31758_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12875;old_locus_tag=YpsIP31758_2312 NC_009708.1 Protein Homology CDS 2616358 2617359 . + 0 ID=cds2260;Parent=gene2329;Dbxref=Genbank:WP_002211121.1;Name=WP_002211121.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NC_009708.1 RefSeq gene 2617388 2618368 . - . ID=gene2330;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12880;old_locus_tag=YpsIP31758_2313 NC_009708.1 Protein Homology CDS 2617388 2618368 . - 0 ID=cds2261;Parent=gene2330;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NC_009708.1 RefSeq gene 2618507 2620171 . - . ID=gene2331;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12885;old_locus_tag=YpsIP31758_2314 NC_009708.1 Protein Homology CDS 2618507 2620171 . - 0 ID=cds2262;Parent=gene2331;Dbxref=Genbank:WP_002211119.1;Name=WP_002211119.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211119.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2620379 2620857 . + . ID=id221;gbkey=repeat_region NC_009708.1 RefSeq gene 2620863 2621807 . - . ID=gene2332;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12890;old_locus_tag=YpsIP31758_2316 NC_009708.1 Protein Homology CDS 2620863 2621807 . - 0 ID=cds2263;Parent=gene2332;Dbxref=Genbank:WP_002211118.1;Name=WP_002211118.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_002211118.1;transl_table=11 NC_009708.1 RefSeq gene 2621807 2622916 . - . ID=gene2333;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12895;old_locus_tag=YpsIP31758_2317 NC_009708.1 Protein Homology CDS 2621807 2622916 . - 0 ID=cds2264;Parent=gene2333;Dbxref=Genbank:WP_002211117.1;Name=WP_002211117.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=WP_002211117.1;transl_table=11 NC_009708.1 RefSeq gene 2622931 2623662 . - . ID=gene2334;Name=YPSIP31758_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12900;old_locus_tag=YpsIP31758_2318 NC_009708.1 Protein Homology CDS 2622931 2623662 . - 0 ID=cds2265;Parent=gene2334;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11 NC_009708.1 RefSeq gene 2623764 2624546 . - . ID=gene2335;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12905;old_locus_tag=YpsIP31758_2319 NC_009708.1 Protein Homology CDS 2623764 2624546 . - 0 ID=cds2266;Parent=gene2335;Dbxref=Genbank:WP_011192166.1;Name=WP_011192166.1;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_011192166.1;transl_table=11 NC_009708.1 RefSeq gene 2624572 2625327 . - . ID=gene2336;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12910;old_locus_tag=YpsIP31758_2320 NC_009708.1 Protein Homology CDS 2624572 2625327 . - 0 ID=cds2267;Parent=gene2336;Dbxref=Genbank:WP_011192165.1;Name=WP_011192165.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_011192165.1;transl_table=11 NC_009708.1 RefSeq gene 2625349 2626635 . - . ID=gene2337;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12915;old_locus_tag=YpsIP31758_2321 NC_009708.1 Protein Homology CDS 2625349 2626635 . - 0 ID=cds2268;Parent=gene2337;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NC_009708.1 RefSeq gene 2626837 2627523 . - . ID=gene2338;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12920;old_locus_tag=YpsIP31758_2322 NC_009708.1 Protein Homology CDS 2626837 2627523 . - 0 ID=cds2269;Parent=gene2338;Dbxref=Genbank:WP_012105283.1;Name=WP_012105283.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_012105283.1;transl_table=11 NC_009708.1 RefSeq gene 2627538 2627942 . - . ID=gene2339;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12925;old_locus_tag=YpsIP31758_2323 NC_009708.1 Protein Homology CDS 2627538 2627942 . - 0 ID=cds2270;Parent=gene2339;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NC_009708.1 RefSeq gene 2627948 2628361 . - . ID=gene2340;Name=YPSIP31758_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12930;old_locus_tag=YpsIP31758_2324 NC_009708.1 Protein Homology CDS 2627948 2628361 . - 0 ID=cds2271;Parent=gene2340;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11 NC_009708.1 RefSeq gene 2628600 2629298 . + . ID=gene2341;Name=YPSIP31758_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12935;old_locus_tag=YpsIP31758_2325 NC_009708.1 Protein Homology CDS 2628600 2629298 . + 0 ID=cds2272;Parent=gene2341;Dbxref=Genbank:WP_012105284.1;Name=WP_012105284.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_012105284.1;transl_table=11 NC_009708.1 RefSeq gene 2629449 2629751 . + . ID=gene2342;Name=YPSIP31758_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12940;old_locus_tag=YpsIP31758_2327 NC_009708.1 Protein Homology CDS 2629449 2629751 . + 0 ID=cds2273;Parent=gene2342;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11 NC_009708.1 RefSeq gene 2629770 2630210 . + . ID=gene2343;Name=YPSIP31758_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12945;old_locus_tag=YpsIP31758_2328 NC_009708.1 Protein Homology CDS 2629770 2630210 . + 0 ID=cds2274;Parent=gene2343;Dbxref=Genbank:WP_012105285.1;Name=WP_012105285.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagella synthesis chaperone protein FlgN;protein_id=WP_012105285.1;transl_table=11 NC_009708.1 RefSeq gene 2630391 2632481 . - . ID=gene2344;Name=YPSIP31758_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12950 NC_009708.1 Protein Homology CDS 2630391 2632481 . - 0 ID=cds2275;Parent=gene2344;Dbxref=Genbank:WP_042593179.1;Name=WP_042593179.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042593179.1;transl_table=11 NC_009708.1 RefSeq gene 2632425 2633216 . - . ID=gene2345;Name=YPSIP31758_RS12955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS12955;partial=true;pseudo=true;start_range=.,2632425 NC_009708.1 Protein Homology CDS 2632425 2633216 . - 0 ID=cds2276;Parent=gene2345;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2632425;transl_table=11 NC_009708.1 RefSeq gene 2633957 2634379 . - . ID=gene2346;Name=YPSIP31758_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12960;old_locus_tag=YpsIP31758_2332 NC_009708.1 Protein Homology CDS 2633957 2634379 . - 0 ID=cds2277;Parent=gene2346;Dbxref=Genbank:WP_011192161.1;Name=WP_011192161.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_011192161.1;transl_table=11 NC_009708.1 RefSeq gene 2634379 2636457 . - . ID=gene2347;Name=YPSIP31758_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12965;old_locus_tag=YpsIP31758_2333 NC_009708.1 Protein Homology CDS 2634379 2636457 . - 0 ID=cds2278;Parent=gene2347;Dbxref=Genbank:WP_012105287.1;Name=WP_012105287.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_012105287.1;transl_table=11 NC_009708.1 RefSeq gene 2636457 2637617 . - . ID=gene2348;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12970;old_locus_tag=YpsIP31758_2334 NC_009708.1 Protein Homology CDS 2636457 2637617 . - 0 ID=cds2279;Parent=gene2348;Dbxref=Genbank:WP_012105288.1;Name=WP_012105288.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=WP_012105288.1;transl_table=11 NC_009708.1 RefSeq gene 2638149 2638607 . + . ID=gene2349;Name=YPSIP31758_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12975;old_locus_tag=YpsIP31758_2335 NC_009708.1 Protein Homology CDS 2638149 2638607 . + 0 ID=cds2280;Parent=gene2349;Dbxref=Genbank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211098.1;transl_table=11 NC_009708.1 RefSeq gene 2638601 2638927 . + . ID=gene2350;Name=YPSIP31758_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12980;old_locus_tag=YpsIP31758_2336 NC_009708.1 Protein Homology CDS 2638601 2638927 . + 0 ID=cds2281;Parent=gene2350;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11 NC_009708.1 RefSeq gene 2638940 2639170 . - . ID=gene2351;Name=YPSIP31758_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12985 NC_009708.1 Protein Homology CDS 2638940 2639170 . - 0 ID=cds2282;Parent=gene2351;Dbxref=Genbank:WP_002218131.1;Name=WP_002218131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218131.1;transl_table=11 NC_009708.1 RefSeq gene 2639150 2639399 . + . ID=gene2352;Name=YPSIP31758_RS22460;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22460 NC_009708.1 RefSeq transcript 2639150 2639399 . + . ID=rna66;Parent=gene2352;gbkey=misc_RNA;product=sraC/ryeA RNA NC_009708.1 RefSeq exon 2639150 2639399 . + . ID=id222;Parent=rna66;gbkey=misc_RNA;product=sraC/ryeA RNA NC_009708.1 RefSeq gene 2639187 2639288 . - . ID=gene2353;Name=YPSIP31758_RS22465;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22465 NC_009708.1 RefSeq transcript 2639187 2639288 . - . ID=rna67;Parent=gene2353;gbkey=misc_RNA;product=RyeB RNA NC_009708.1 RefSeq exon 2639187 2639288 . - . ID=id223;Parent=rna67;gbkey=misc_RNA;product=RyeB RNA NC_009708.1 RefSeq gene 2639450 2639791 . - . ID=gene2354;Name=YPSIP31758_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12990;old_locus_tag=YpsIP31758_2337 NC_009708.1 Protein Homology CDS 2639450 2639791 . - 0 ID=cds2283;Parent=gene2354;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11 NC_009708.1 RefSeq gene 2639888 2640772 . - . ID=gene2355;Name=YPSIP31758_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS12995;old_locus_tag=YpsIP31758_2338 NC_009708.1 Protein Homology CDS 2639888 2640772 . - 0 ID=cds2284;Parent=gene2355;Dbxref=Genbank:WP_012105289.1;Name=WP_012105289.1;gbkey=CDS;product=copper resistance protein CopD;protein_id=WP_012105289.1;transl_table=11 NC_009708.1 RefSeq gene 2640775 2641161 . - . ID=gene2356;Name=YPSIP31758_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13000;old_locus_tag=YpsIP31758_2339 NC_009708.1 Protein Homology CDS 2640775 2641161 . - 0 ID=cds2285;Parent=gene2356;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11 NC_009708.1 RefSeq gene 2641588 2642097 . - . ID=gene2357;Name=YPSIP31758_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13005;old_locus_tag=YpsIP31758_2341 NC_009708.1 Protein Homology CDS 2641588 2642097 . - 0 ID=cds2286;Parent=gene2357;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11 NC_009708.1 RefSeq gene 2642498 2642728 . + . ID=gene2358;Name=YPSIP31758_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13010;old_locus_tag=YpsIP31758_2343 NC_009708.1 Protein Homology CDS 2642498 2642728 . + 0 ID=cds2287;Parent=gene2358;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NC_009708.1 RefSeq gene 2642788 2643738 . - . ID=gene2359;Name=YPSIP31758_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13015;old_locus_tag=YpsIP31758_2344 NC_009708.1 Protein Homology CDS 2642788 2643738 . - 0 ID=cds2288;Parent=gene2359;Dbxref=Genbank:WP_011192157.1;Name=WP_011192157.1;gbkey=CDS;product=proline iminopeptidase;protein_id=WP_011192157.1;transl_table=11 NC_009708.1 RefSeq gene 2644458 2646509 . - . ID=gene2360;Name=YPSIP31758_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13020;old_locus_tag=YpsIP31758_2346 NC_009708.1 Protein Homology CDS 2644458 2646509 . - 0 ID=cds2289;Parent=gene2360;Dbxref=Genbank:WP_002211088.1;Name=WP_002211088.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=oligopeptidase B;protein_id=WP_002211088.1;transl_table=11 NC_009708.1 RefSeq gene 2646819 2647244 . - . ID=gene2361;Name=YPSIP31758_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13025;old_locus_tag=YpsIP31758_2347 NC_009708.1 Protein Homology CDS 2646819 2647244 . - 0 ID=cds2290;Parent=gene2361;Dbxref=Genbank:WP_012304226.1;Name=WP_012304226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304226.1;transl_table=11 NC_009708.1 RefSeq gene 2647336 2647644 . - . ID=gene2362;Name=YPSIP31758_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13030;old_locus_tag=YpsIP31758_2348 NC_009708.1 Protein Homology CDS 2647336 2647644 . - 0 ID=cds2291;Parent=gene2362;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11 NC_009708.1 RefSeq gene 2647684 2648004 . - . ID=gene2363;Name=YPSIP31758_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13035;old_locus_tag=YpsIP31758_2349 NC_009708.1 Protein Homology CDS 2647684 2648004 . - 0 ID=cds2292;Parent=gene2363;Dbxref=Genbank:WP_012105291.1;Name=WP_012105291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105291.1;transl_table=11 NC_009708.1 RefSeq gene 2648098 2649480 . - . ID=gene2364;Name=YPSIP31758_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13040;old_locus_tag=YpsIP31758_2350 NC_009708.1 Protein Homology CDS 2648098 2649480 . - 0 ID=cds2293;Parent=gene2364;Dbxref=Genbank:WP_012105292.1;Name=WP_012105292.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_012105292.1;transl_table=11 NC_009708.1 RefSeq gene 2649793 2650974 . + . ID=gene2365;Name=YPSIP31758_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13045;old_locus_tag=YpsIP31758_2351 NC_009708.1 Protein Homology CDS 2649793 2650974 . + 0 ID=cds2294;Parent=gene2365;Dbxref=Genbank:WP_012105293.1;Name=WP_012105293.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_012105293.1;transl_table=11 NC_009708.1 RefSeq gene 2651104 2651361 . - . ID=gene2366;Name=YPSIP31758_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13050;old_locus_tag=YpsIP31758_2352 NC_009708.1 Protein Homology CDS 2651104 2651361 . - 0 ID=cds2295;Parent=gene2366;Dbxref=Genbank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211082.1;transl_table=11 NC_009708.1 RefSeq gene 2651526 2652902 . + . ID=gene2367;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13055;old_locus_tag=YpsIP31758_2353 NC_009708.1 Protein Homology CDS 2651526 2652902 . + 0 ID=cds2296;Parent=gene2367;Dbxref=Genbank:WP_002211081.1;Name=WP_002211081.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase component I;protein_id=WP_002211081.1;transl_table=11 NC_009708.1 RefSeq gene 2652899 2653498 . + . ID=gene2368;Name=YPSIP31758_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13060;old_locus_tag=YpsIP31758_2354 NC_009708.1 Protein Homology CDS 2652899 2653498 . + 0 ID=cds2297;Parent=gene2368;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11 NC_009708.1 RefSeq gene 2654226 2655590 . + . ID=gene2369;Name=YPSIP31758_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13065;old_locus_tag=YpsIP31758_2355 NC_009708.1 Protein Homology CDS 2654226 2655590 . + 0 ID=cds2298;Parent=gene2369;Dbxref=Genbank:WP_011192152.1;Name=WP_011192152.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_011192152.1;transl_table=11 NC_009708.1 RefSeq gene 2655870 2656367 . - . ID=gene2370;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13070;old_locus_tag=YpsIP31758_2356 NC_009708.1 Protein Homology CDS 2655870 2656367 . - 0 ID=cds2299;Parent=gene2370;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11 NC_009708.1 RefSeq gene 2656388 2657950 . - . ID=gene2371;Name=YPSIP31758_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13075;old_locus_tag=YpsIP31758_2357 NC_009708.1 Protein Homology CDS 2656388 2657950 . - 0 ID=cds2300;Parent=gene2371;Dbxref=Genbank:WP_012105296.1;Name=WP_012105296.1;gbkey=CDS;product=Pyoverdin chromophore biosynthetic protein pvcC;protein_id=WP_012105296.1;transl_table=11 NC_009708.1 RefSeq gene 2658018 2659385 . - . ID=gene2372;Name=YPSIP31758_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13080;old_locus_tag=YpsIP31758_2358 NC_009708.1 Protein Homology CDS 2658018 2659385 . - 0 ID=cds2301;Parent=gene2372;Dbxref=Genbank:WP_012105297.1;Name=WP_012105297.1;gbkey=CDS;product=4-hydroxyphenylacetate permease;protein_id=WP_012105297.1;transl_table=11 NC_009708.1 RefSeq gene 2659411 2660217 . - . ID=gene2373;Name=YPSIP31758_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13085;old_locus_tag=YpsIP31758_2359 NC_009708.1 Protein Homology CDS 2659411 2660217 . - 0 ID=cds2302;Parent=gene2373;Dbxref=Genbank:WP_002231102.1;Name=WP_002231102.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002231102.1;transl_table=11 NC_009708.1 RefSeq gene 2660228 2661031 . - . ID=gene2374;Name=YPSIP31758_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13090;old_locus_tag=YpsIP31758_2360 NC_009708.1 Protein Homology CDS 2660228 2661031 . - 0 ID=cds2303;Parent=gene2374;Dbxref=Genbank:WP_011192151.1;Name=WP_011192151.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_011192151.1;transl_table=11 NC_009708.1 RefSeq gene 2661025 2661423 . - . ID=gene2375;Name=YPSIP31758_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13095;old_locus_tag=YpsIP31758_2361 NC_009708.1 Protein Homology CDS 2661025 2661423 . - 0 ID=cds2304;Parent=gene2375;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11 NC_009708.1 RefSeq gene 2661448 2662305 . - . ID=gene2376;Name=YPSIP31758_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13100;old_locus_tag=YpsIP31758_2362 NC_009708.1 Protein Homology CDS 2661448 2662305 . - 0 ID=cds2305;Parent=gene2376;Dbxref=Genbank:WP_002211072.1;Name=WP_002211072.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11 NC_009708.1 RefSeq gene 2662424 2663890 . - . ID=gene2377;Name=YPSIP31758_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13105;old_locus_tag=YpsIP31758_2363 NC_009708.1 Protein Homology CDS 2662424 2663890 . - 0 ID=cds2306;Parent=gene2377;Dbxref=Genbank:WP_012105298.1;Name=WP_012105298.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_012105298.1;transl_table=11 NC_009708.1 RefSeq gene 2663887 2664651 . - . ID=gene2378;Name=YPSIP31758_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13110;old_locus_tag=YpsIP31758_2364 NC_009708.1 Protein Homology CDS 2663887 2664651 . - 0 ID=cds2307;Parent=gene2378;Dbxref=Genbank:WP_002214882.1;Name=WP_002214882.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214882.1;transl_table=11 NC_009708.1 RefSeq gene 2664648 2665280 . - . ID=gene2379;Name=YPSIP31758_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13115;old_locus_tag=YpsIP31758_2365 NC_009708.1 Protein Homology CDS 2664648 2665280 . - 0 ID=cds2308;Parent=gene2379;Dbxref=Genbank:WP_011192147.1;Name=WP_011192147.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_011192147.1;transl_table=11 NC_009708.1 RefSeq gene 2665650 2666117 . + . ID=gene2380;Name=YPSIP31758_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13120;old_locus_tag=YpsIP31758_2366 NC_009708.1 Protein Homology CDS 2665650 2666117 . + 0 ID=cds2309;Parent=gene2380;Dbxref=Genbank:WP_002211070.1;Name=WP_002211070.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_002211070.1;transl_table=11 NC_009708.1 RefSeq gene 2666219 2667763 . - . ID=gene2381;Name=YPSIP31758_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13125;old_locus_tag=YpsIP31758_2367 NC_009708.1 Protein Homology CDS 2666219 2667763 . - 0 ID=cds2310;Parent=gene2381;Dbxref=Genbank:WP_002231099.1;Name=WP_002231099.1;gbkey=CDS;product=membrane protein;protein_id=WP_002231099.1;transl_table=11 NC_009708.1 RefSeq gene 2668474 2669448 . + . ID=gene2382;Name=YPSIP31758_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13130;old_locus_tag=YpsIP31758_2368 NC_009708.1 Protein Homology CDS 2668474 2669448 . + 0 ID=cds2311;Parent=gene2382;Dbxref=Genbank:WP_012105299.1;Name=WP_012105299.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_012105299.1;transl_table=11 NC_009708.1 RefSeq gene 2669540 2670337 . + . ID=gene2383;Name=YPSIP31758_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13135;old_locus_tag=YpsIP31758_2369 NC_009708.1 Protein Homology CDS 2669540 2670337 . + 0 ID=cds2312;Parent=gene2383;Dbxref=Genbank:WP_002211068.1;Name=WP_002211068.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NC_009708.1 RefSeq gene 2670353 2671231 . + . ID=gene2384;Name=YPSIP31758_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13140;old_locus_tag=YpsIP31758_2370 NC_009708.1 Protein Homology CDS 2670353 2671231 . + 0 ID=cds2313;Parent=gene2384;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NC_009708.1 RefSeq gene 2671431 2671892 . + . ID=gene2385;Name=YPSIP31758_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13145;old_locus_tag=YpsIP31758_2371 NC_009708.1 Protein Homology CDS 2671431 2671892 . + 0 ID=cds2314;Parent=gene2385;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11 NC_009708.1 RefSeq gene 2672321 2672890 . + . ID=gene2386;Name=YPSIP31758_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13150;old_locus_tag=YpsIP31758_2372 NC_009708.1 Protein Homology CDS 2672321 2672890 . + 0 ID=cds2315;Parent=gene2386;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11 NC_009708.1 RefSeq gene 2673051 2675279 . - . ID=gene2387;Name=YPSIP31758_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13155;old_locus_tag=YpsIP31758_2373 NC_009708.1 Protein Homology CDS 2673051 2675279 . - 0 ID=cds2316;Parent=gene2387;Dbxref=Genbank:WP_041175447.1;Name=WP_041175447.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_041175447.1;transl_table=11 NC_009708.1 RefSeq gene 2675701 2677782 . + . ID=gene2388;Name=YPSIP31758_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13160;old_locus_tag=YpsIP31758_2374 NC_009708.1 Protein Homology CDS 2675701 2677782 . + 0 ID=cds2317;Parent=gene2388;Dbxref=Genbank:WP_002211063.1;Name=WP_002211063.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211063.1;transl_table=11 NC_009708.1 RefSeq gene 2678004 2678282 . + . ID=gene2389;Name=YPSIP31758_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13165;old_locus_tag=YpsIP31758_2375 NC_009708.1 Protein Homology CDS 2678004 2678282 . + 0 ID=cds2318;Parent=gene2389;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NC_009708.1 RefSeq gene 2678504 2679343 . - . ID=gene2390;Name=YPSIP31758_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13170;old_locus_tag=YpsIP31758_2376 NC_009708.1 Protein Homology CDS 2678504 2679343 . - 0 ID=cds2319;Parent=gene2390;Dbxref=Genbank:WP_011192144.1;Name=WP_011192144.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_011192144.1;transl_table=11 NC_009708.1 RefSeq gene 2679739 2680512 . + . ID=gene2391;Name=YPSIP31758_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13175;old_locus_tag=YpsIP31758_2377 NC_009708.1 Protein Homology CDS 2679739 2680512 . + 0 ID=cds2320;Parent=gene2391;Dbxref=Genbank:WP_012105300.1;Name=WP_012105300.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_012105300.1;transl_table=11 NC_009708.1 cmsearch region 2680560 2680988 . - . ID=id224;Note=cspA;gbkey=misc_feature NC_009708.1 RefSeq gene 2680603 2680812 . - . ID=gene2392;Name=YPSIP31758_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13180;old_locus_tag=YpsIP31758_5001 NC_009708.1 Protein Homology CDS 2680603 2680812 . - 0 ID=cds2321;Parent=gene2392;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11 NC_009708.1 RefSeq gene 2680855 2680971 . - . ID=gene2393;Name=YPSIP31758_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13185 NC_009708.1 Protein Homology CDS 2680855 2680971 . - 0 ID=cds2322;Parent=gene2393;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11 NC_009708.1 RefSeq gene 2681737 2681958 . - . ID=gene2394;Name=YPSIP31758_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13190 NC_009708.1 Protein Homology CDS 2681737 2681958 . - 0 ID=cds2323;Parent=gene2394;Dbxref=Genbank:WP_032466263.1;Name=WP_032466263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466263.1;transl_table=11 NC_009708.1 RefSeq gene 2681973 2682581 . + . ID=gene2395;Name=YPSIP31758_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13195;old_locus_tag=YpsIP31758_2380 NC_009708.1 Protein Homology CDS 2681973 2682581 . + 0 ID=cds2324;Parent=gene2395;Dbxref=Genbank:WP_011192143.1;Name=WP_011192143.1;gbkey=CDS;product=lipid A palmitoyltransferase PagP;protein_id=WP_011192143.1;transl_table=11 NC_009708.1 RefSeq gene 2682877 2684250 . - . ID=gene2396;Name=YPSIP31758_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13200;old_locus_tag=YpsIP31758_2381 NC_009708.1 Protein Homology CDS 2682877 2684250 . - 0 ID=cds2325;Parent=gene2396;Dbxref=Genbank:WP_002211055.1;Name=WP_002211055.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002211055.1;transl_table=11 NC_009708.1 RefSeq gene 2684487 2684732 . - . ID=gene2397;Name=YPSIP31758_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13205;old_locus_tag=YpsIP31758_2382 NC_009708.1 Protein Homology CDS 2684487 2684732 . - 0 ID=cds2326;Parent=gene2397;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11 NC_009708.1 RefSeq gene 2684841 2685140 . - . ID=gene2398;Name=YPSIP31758_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13210;old_locus_tag=YpsIP31758_2383 NC_009708.1 Protein Homology CDS 2684841 2685140 . - 0 ID=cds2327;Parent=gene2398;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11 NC_009708.1 RefSeq gene 2685403 2685678 . - . ID=gene2399;Name=YPSIP31758_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13215;old_locus_tag=YpsIP31758_2384 NC_009708.1 Protein Homology CDS 2685403 2685678 . - 0 ID=cds2328;Parent=gene2399;Dbxref=Genbank:WP_002216495.1;Name=WP_002216495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216495.1;transl_table=11 NC_009708.1 RefSeq gene 2686261 2686494 . + . ID=gene2400;Name=YPSIP31758_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13220;old_locus_tag=YpsIP31758_2385 NC_009708.1 Protein Homology CDS 2686261 2686494 . + 0 ID=cds2329;Parent=gene2400;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11 NC_009708.1 RefSeq gene 2686585 2686824 . - . ID=gene2401;Name=YPSIP31758_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13225;old_locus_tag=YpsIP31758_2386 NC_009708.1 Protein Homology CDS 2686585 2686824 . - 0 ID=cds2330;Parent=gene2401;Dbxref=Genbank:WP_011192141.1;Name=WP_011192141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192141.1;transl_table=11 NC_009708.1 RefSeq gene 2687036 2687149 . - . ID=gene2402;Name=YPSIP31758_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13230 NC_009708.1 Protein Homology CDS 2687036 2687149 . - 0 ID=cds2331;Parent=gene2402;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11 NC_009708.1 RefSeq gene 2687380 2687766 . + . ID=gene2403;Name=YPSIP31758_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13235;old_locus_tag=YpsIP31758_2387 NC_009708.1 Protein Homology CDS 2687380 2687766 . + 0 ID=cds2332;Parent=gene2403;Dbxref=Genbank:WP_002224436.1;Name=WP_002224436.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002224436.1;transl_table=11 NC_009708.1 RefSeq gene 2687848 2688012 . - . ID=gene2404;Name=YPSIP31758_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13240;old_locus_tag=YpsIP31758_2388 NC_009708.1 Protein Homology CDS 2687848 2688012 . - 0 ID=cds2333;Parent=gene2404;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11 NC_009708.1 RefSeq gene 2688667 2690385 . + . ID=gene2405;Name=YPSIP31758_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13245;old_locus_tag=YpsIP31758_2389 NC_009708.1 Protein Homology CDS 2688667 2690385 . + 0 ID=cds2334;Parent=gene2405;Dbxref=Genbank:WP_012105302.1;Name=WP_012105302.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_012105302.1;transl_table=11 NC_009708.1 RefSeq gene 2690488 2691339 . + . ID=gene2406;Name=YPSIP31758_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13250;old_locus_tag=YpsIP31758_2390 NC_009708.1 Protein Homology CDS 2690488 2691339 . + 0 ID=cds2335;Parent=gene2406;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11 NC_009708.1 RefSeq gene 2691576 2691860 . + . ID=gene2407;Name=YPSIP31758_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13255;old_locus_tag=YpsIP31758_2391 NC_009708.1 Protein Homology CDS 2691576 2691860 . + 0 ID=cds2336;Parent=gene2407;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11 NC_009708.1 RefSeq gene 2692046 2692234 . - . ID=gene2408;Name=YPSIP31758_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13260 NC_009708.1 Protein Homology CDS 2692046 2692234 . - 0 ID=cds2337;Parent=gene2408;Dbxref=Genbank:WP_002216490.1;Name=WP_002216490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216490.1;transl_table=11 NC_009708.1 RefSeq gene 2692250 2693062 . + . ID=gene2409;Name=YPSIP31758_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13265;old_locus_tag=YpsIP31758_2392 NC_009708.1 Protein Homology CDS 2692250 2693062 . + 0 ID=cds2338;Parent=gene2409;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11 NC_009708.1 RefSeq gene 2693240 2693315 . + . ID=gene2410;Name=YPSIP31758_RS13270;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS13270;old_locus_tag=YpsIP31758_4240 NC_009708.1 tRNAscan-SE tRNA 2693240 2693315 . + . ID=rna68;Parent=gene2410;anticodon=(pos:2693273..2693275);gbkey=tRNA;product=tRNA-Asn NC_009708.1 tRNAscan-SE exon 2693240 2693315 . + . ID=id225;Parent=rna68;anticodon=(pos:2693273..2693275);gbkey=tRNA;product=tRNA-Asn NC_009708.1 RefSeq gene 2693473 2694489 . - . ID=gene2411;Name=YPSIP31758_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13275;old_locus_tag=YpsIP31758_2393 NC_009708.1 Protein Homology CDS 2693473 2694489 . - 0 ID=cds2339;Parent=gene2411;Dbxref=Genbank:WP_002230719.1;Name=WP_002230719.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230719.1;transl_table=11 NC_009708.1 RefSeq gene 2694844 2696151 . + . ID=gene2412;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13280;old_locus_tag=YpsIP31758_2394 NC_009708.1 Protein Homology CDS 2694844 2696151 . + 0 ID=cds2340;Parent=gene2412;Dbxref=Genbank:WP_012105303.1;Name=WP_012105303.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_012105303.1;transl_table=11 NC_009708.1 RefSeq gene 2696229 2698355 . + . ID=gene2413;Name=YPSIP31758_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13285;old_locus_tag=YpsIP31758_2395 NC_009708.1 Protein Homology CDS 2696229 2698355 . + 0 ID=cds2341;Parent=gene2413;Dbxref=Genbank:WP_012105304.1;Name=WP_012105304.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_012105304.1;transl_table=11 NC_009708.1 RefSeq gene 2698372 2698536 . + . ID=gene2414;Name=YPSIP31758_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13290;old_locus_tag=YpsIP31758_2396 NC_009708.1 Protein Homology CDS 2698372 2698536 . + 0 ID=cds2342;Parent=gene2414;Dbxref=Genbank:WP_002216586.1;Name=WP_002216586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216586.1;transl_table=11 NC_009708.1 RefSeq gene 2698742 2699482 . - . ID=gene2415;Name=YPSIP31758_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13295;old_locus_tag=YpsIP31758_2398 NC_009708.1 Protein Homology CDS 2698742 2699482 . - 0 ID=cds2343;Parent=gene2415;Dbxref=Genbank:WP_002213120.1;Name=WP_002213120.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_002213120.1;transl_table=11 NC_009708.1 RefSeq gene 2699991 2700983 . + . ID=gene2416;Name=YPSIP31758_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13300;old_locus_tag=YpsIP31758_2399 NC_009708.1 Protein Homology CDS 2699991 2700983 . + 0 ID=cds2344;Parent=gene2416;Dbxref=Genbank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213121.1;transl_table=11 NC_009708.1 RefSeq gene 2701107 2701613 . + . ID=gene2417;Name=YPSIP31758_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13305;old_locus_tag=YpsIP31758_2400 NC_009708.1 Protein Homology CDS 2701107 2701613 . + 0 ID=cds2345;Parent=gene2417;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11 NC_009708.1 RefSeq gene 2701633 2702925 . + . ID=gene2418;Name=YPSIP31758_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13310;old_locus_tag=YpsIP31758_2401 NC_009708.1 Protein Homology CDS 2701633 2702925 . + 0 ID=cds2346;Parent=gene2418;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11 NC_009708.1 RefSeq gene 2703183 2703812 . + . ID=gene2419;Name=YPSIP31758_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13315;old_locus_tag=YpsIP31758_2402 NC_009708.1 Protein Homology CDS 2703183 2703812 . + 0 ID=cds2347;Parent=gene2419;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2704228 2704337 . + . ID=id226;gbkey=repeat_region NC_009708.1 RefSeq gene 2704258 2704333 . + . ID=gene2420;Name=YPSIP31758_RS13320;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS13320;old_locus_tag=YpsIP31758_4241 NC_009708.1 tRNAscan-SE tRNA 2704258 2704333 . + . ID=rna69;Parent=gene2420;anticodon=(pos:2704291..2704293);gbkey=tRNA;product=tRNA-Asn NC_009708.1 tRNAscan-SE exon 2704258 2704333 . + . ID=id227;Parent=rna69;anticodon=(pos:2704291..2704293);gbkey=tRNA;product=tRNA-Asn NC_009708.1 RefSeq gene 2704696 2705235 . - . ID=gene2421;Name=YPSIP31758_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13325;old_locus_tag=YpsIP31758_2403 NC_009708.1 Protein Homology CDS 2704696 2705235 . - 0 ID=cds2348;Parent=gene2421;Dbxref=Genbank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211926.1;transl_table=11 NC_009708.1 RefSeq gene 2705325 2706020 . - . ID=gene2422;Name=YPSIP31758_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13330;old_locus_tag=YpsIP31758_2404 NC_009708.1 Protein Homology CDS 2705325 2706020 . - 0 ID=cds2349;Parent=gene2422;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NC_009708.1 RefSeq gene 2706597 2707478 . + . ID=gene2423;Name=YPSIP31758_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13335;old_locus_tag=YpsIP31758_2405 NC_009708.1 Protein Homology CDS 2706597 2707478 . + 0 ID=cds2350;Parent=gene2423;Dbxref=Genbank:WP_012105305.1;Name=WP_012105305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105305.1;transl_table=11 NC_009708.1 RefSeq gene 2707514 2708854 . + . ID=gene2424;Name=YPSIP31758_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13340;old_locus_tag=YpsIP31758_2406 NC_009708.1 Protein Homology CDS 2707514 2708854 . + 0 ID=cds2351;Parent=gene2424;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11 NC_009708.1 RefSeq gene 2708882 2710279 . - . ID=gene2425;Name=YPSIP31758_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13345;old_locus_tag=YpsIP31758_2407 NC_009708.1 Protein Homology CDS 2708882 2710279 . - 0 ID=cds2352;Parent=gene2425;Dbxref=Genbank:WP_042594295.1;Name=WP_042594295.1;gbkey=CDS;product=MATE family efflux transporter;protein_id=WP_042594295.1;transl_table=11 NC_009708.1 RefSeq gene 2710606 2711973 . + . ID=gene2426;Name=YPSIP31758_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13350;old_locus_tag=YpsIP31758_2408 NC_009708.1 Protein Homology CDS 2710606 2711973 . + 0 ID=cds2353;Parent=gene2426;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NC_009708.1 RefSeq gene 2712178 2713323 . - . ID=gene2427;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13355;old_locus_tag=YpsIP31758_2409 NC_009708.1 Protein Homology CDS 2712178 2713323 . - 0 ID=cds2354;Parent=gene2427;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11 NC_009708.1 RefSeq gene 2713620 2714897 . - . ID=gene2428;Name=YPSIP31758_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13360;old_locus_tag=YpsIP31758_2410 NC_009708.1 Protein Homology CDS 2713620 2714897 . - 0 ID=cds2355;Parent=gene2428;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NC_009708.1 RefSeq gene 2714929 2715771 . - . ID=gene2429;Name=YPSIP31758_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13365;old_locus_tag=YpsIP31758_2411 NC_009708.1 Protein Homology CDS 2714929 2715771 . - 0 ID=cds2356;Parent=gene2429;Dbxref=Genbank:WP_012105307.1;Name=WP_012105307.1;gbkey=CDS;product=ureidoglycolate lyase;protein_id=WP_012105307.1;transl_table=11 NC_009708.1 RefSeq gene 2715819 2716559 . - . ID=gene2430;Name=YPSIP31758_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13370;old_locus_tag=YpsIP31758_2412 NC_009708.1 Protein Homology CDS 2715819 2716559 . - 0 ID=cds2357;Parent=gene2430;Dbxref=Genbank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216393.1;transl_table=11 NC_009708.1 RefSeq gene 2716987 2717409 . + . ID=gene2431;Name=YPSIP31758_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13375;old_locus_tag=YpsIP31758_2413 NC_009708.1 Protein Homology CDS 2716987 2717409 . + 0 ID=cds2358;Parent=gene2431;Dbxref=Genbank:WP_012105308.1;Name=WP_012105308.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_012105308.1;transl_table=11 NC_009708.1 RefSeq gene 2717418 2718722 . - . ID=gene2432;Name=YPSIP31758_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13380;old_locus_tag=YpsIP31758_2414 NC_009708.1 Protein Homology CDS 2717418 2718722 . - 0 ID=cds2359;Parent=gene2432;Dbxref=Genbank:WP_012105309.1;Name=WP_012105309.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012105309.1;transl_table=11 NC_009708.1 RefSeq gene 2719915 2722989 . + . ID=gene2433;Name=YPSIP31758_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13385;old_locus_tag=YpsIP31758_2416 NC_009708.1 Protein Homology CDS 2719915 2722989 . + 0 ID=cds2360;Parent=gene2433;Dbxref=Genbank:WP_041175874.1;Name=WP_041175874.1;gbkey=CDS;product=adhesin;protein_id=WP_041175874.1;transl_table=11 NC_009708.1 RefSeq gene 2723133 2723450 . - . ID=gene2434;Name=YPSIP31758_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13390;old_locus_tag=YpsIP31758_2417 NC_009708.1 Protein Homology CDS 2723133 2723450 . - 0 ID=cds2361;Parent=gene2434;Dbxref=Genbank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217522.1;transl_table=11 NC_009708.1 RefSeq gene 2723884 2724993 . - . ID=gene2435;Name=YPSIP31758_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13395;old_locus_tag=YpsIP31758_2419 NC_009708.1 Protein Homology CDS 2723884 2724993 . - 0 ID=cds2362;Parent=gene2435;Dbxref=Genbank:WP_012105313.1;Name=WP_012105313.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_012105313.1;transl_table=11 NC_009708.1 RefSeq gene 2725286 2726716 . + . ID=gene2436;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13400;old_locus_tag=YpsIP31758_2420 NC_009708.1 Protein Homology CDS 2725286 2726716 . + 0 ID=cds2363;Parent=gene2436;Dbxref=Genbank:WP_012105314.1;Name=WP_012105314.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_012105314.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2726751 2728338 . + . ID=id228;gbkey=repeat_region NC_009708.1 RefSeq gene 2728834 2730225 . - . ID=gene2437;Name=YPSIP31758_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13405;old_locus_tag=YpsIP31758_2421 NC_009708.1 Protein Homology CDS 2728834 2730225 . - 0 ID=cds2364;Parent=gene2437;Dbxref=Genbank:WP_011192126.1;Name=WP_011192126.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_011192126.1;transl_table=11 NC_009708.1 RefSeq gene 2730215 2730430 . - . ID=gene2438;Name=YPSIP31758_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13410 NC_009708.1 Protein Homology CDS 2730215 2730430 . - 0 ID=cds2365;Parent=gene2438;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NC_009708.1 RefSeq gene 2730684 2731775 . - . ID=gene2439;Name=YPSIP31758_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13415;old_locus_tag=YpsIP31758_2422 NC_009708.1 Protein Homology CDS 2730684 2731775 . - 0 ID=cds2366;Parent=gene2439;Dbxref=Genbank:WP_002216312.1;Name=WP_002216312.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11 NC_009708.1 RefSeq gene 2732061 2733602 . + . ID=gene2440;Name=YPSIP31758_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13420;old_locus_tag=YpsIP31758_2423 NC_009708.1 Protein Homology CDS 2732061 2733602 . + 0 ID=cds2367;Parent=gene2440;Dbxref=Genbank:WP_012105315.1;Name=WP_012105315.1;gbkey=CDS;product=ABC transporter;protein_id=WP_012105315.1;transl_table=11 NC_009708.1 RefSeq gene 2733599 2734594 . + . ID=gene2441;Name=YPSIP31758_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13425;old_locus_tag=YpsIP31758_2424 NC_009708.1 Protein Homology CDS 2733599 2734594 . + 0 ID=cds2368;Parent=gene2441;Dbxref=Genbank:WP_002211900.1;Name=WP_002211900.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211900.1;transl_table=11 NC_009708.1 RefSeq gene 2734750 2735286 . + . ID=gene2442;Name=YPSIP31758_RS22580;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS22580 NC_009708.1 RefSeq repeat_region 2734772 2734943 . + . ID=id229;gbkey=repeat_region NC_009708.1 RefSeq gene 2734852 2735286 . + . ID=gene2443;Name=YPSIP31758_RS13435;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS13435;old_locus_tag=YpsIP31758_2425 NC_009708.1 RefSeq gene 2735441 2736268 . - . ID=gene2444;Name=YPSIP31758_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13440;old_locus_tag=YpsIP31758_2426 NC_009708.1 Protein Homology CDS 2735441 2736268 . - 0 ID=cds2369;Parent=gene2444;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11 NC_009708.1 RefSeq gene 2736998 2737897 . + . ID=gene2445;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13445;old_locus_tag=YpsIP31758_2428 NC_009708.1 Protein Homology CDS 2736998 2737897 . + 0 ID=cds2370;Parent=gene2445;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NC_009708.1 RefSeq gene 2737901 2739232 . + . ID=gene2446;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13450;old_locus_tag=YpsIP31758_2429 NC_009708.1 Protein Homology CDS 2737901 2739232 . + 0 ID=cds2371;Parent=gene2446;Dbxref=Genbank:WP_002211895.1;Name=WP_002211895.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NC_009708.1 RefSeq gene 2739235 2740383 . + . ID=gene2447;Name=YPSIP31758_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13455;old_locus_tag=YpsIP31758_2430 NC_009708.1 Protein Homology CDS 2739235 2740383 . + 0 ID=cds2372;Parent=gene2447;Dbxref=Genbank:WP_012105317.1;Name=WP_012105317.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_012105317.1;transl_table=11 NC_009708.1 RefSeq gene 2740380 2741447 . + . ID=gene2448;Name=YPSIP31758_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13460;old_locus_tag=YpsIP31758_2431 NC_009708.1 Protein Homology CDS 2740380 2741447 . + 0 ID=cds2373;Parent=gene2448;Dbxref=Genbank:WP_012105319.1;Name=WP_012105319.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=imidazoleglycerol-phosphate dehydratase;protein_id=WP_012105319.1;transl_table=11 NC_009708.1 RefSeq gene 2741447 2742037 . + . ID=gene2449;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13465;old_locus_tag=YpsIP31758_2432 NC_009708.1 Protein Homology CDS 2741447 2742037 . + 0 ID=cds2374;Parent=gene2449;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NC_009708.1 RefSeq gene 2742043 2742780 . + . ID=gene2450;Name=YPSIP31758_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13470;old_locus_tag=YpsIP31758_2433 NC_009708.1 Protein Homology CDS 2742043 2742780 . + 0 ID=cds2375;Parent=gene2450;Dbxref=Genbank:WP_002211891.1;Name=WP_002211891.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NC_009708.1 RefSeq gene 2742762 2743538 . + . ID=gene2451;Name=YPSIP31758_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13475;old_locus_tag=YpsIP31758_2434 NC_009708.1 Protein Homology CDS 2742762 2743538 . + 0 ID=cds2376;Parent=gene2451;Dbxref=Genbank:WP_002211890.1;Name=WP_002211890.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11 NC_009708.1 RefSeq gene 2743532 2744146 . + . ID=gene2452;Name=YPSIP31758_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13480;old_locus_tag=YpsIP31758_2435 NC_009708.1 Protein Homology CDS 2743532 2744146 . + 0 ID=cds2377;Parent=gene2452;Dbxref=Genbank:WP_012105321.1;Name=WP_012105321.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_012105321.1;transl_table=11 NC_009708.1 RefSeq gene 2744346 2745755 . - . ID=gene2453;Name=YPSIP31758_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13485;old_locus_tag=YpsIP31758_2436 NC_009708.1 Protein Homology CDS 2744346 2745755 . - 0 ID=cds2378;Parent=gene2453;Dbxref=Genbank:WP_002211888.1;Name=WP_002211888.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11 NC_009708.1 RefSeq gene 2746186 2747079 . - . ID=gene2454;Name=YPSIP31758_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13490;old_locus_tag=YpsIP31758_2437 NC_009708.1 Protein Homology CDS 2746186 2747079 . - 0 ID=cds2379;Parent=gene2454;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11 NC_009708.1 RefSeq gene 2747145 2748035 . - . ID=gene2455;Name=YPSIP31758_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13495;old_locus_tag=YpsIP31758_2438 NC_009708.1 Protein Homology CDS 2747145 2748035 . - 0 ID=cds2380;Parent=gene2455;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11 NC_009708.1 RefSeq gene 2748982 2750796 . + . ID=gene2456;Name=YPSIP31758_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13500;old_locus_tag=YpsIP31758_2439 NC_009708.1 Protein Homology CDS 2748982 2750796 . + 0 ID=cds2381;Parent=gene2456;Dbxref=Genbank:WP_012105323.1;Name=WP_012105323.1;gbkey=CDS;product=siderophore biosynthesis protein IucA;protein_id=WP_012105323.1;transl_table=11 NC_009708.1 RefSeq gene 2751026 2753287 . + . ID=gene2457;Name=YPSIP31758_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13505;old_locus_tag=YpsIP31758_2440 NC_009708.1 Protein Homology CDS 2751026 2753287 . + 0 ID=cds2382;Parent=gene2457;Dbxref=Genbank:WP_012105324.1;Name=WP_012105324.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_012105324.1;transl_table=11 NC_009708.1 RefSeq gene 2753377 2754456 . + . ID=gene2458;Name=YPSIP31758_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13510;old_locus_tag=YpsIP31758_2441 NC_009708.1 Protein Homology CDS 2753377 2754456 . + 0 ID=cds2383;Parent=gene2458;Dbxref=Genbank:WP_011192116.1;Name=WP_011192116.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_011192116.1;transl_table=11 NC_009708.1 RefSeq gene 2754453 2755493 . + . ID=gene2459;Name=YPSIP31758_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13515;old_locus_tag=YpsIP31758_2442 NC_009708.1 Protein Homology CDS 2754453 2755493 . + 0 ID=cds2384;Parent=gene2459;Dbxref=Genbank:WP_012105325.1;Name=WP_012105325.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_012105325.1;transl_table=11 NC_009708.1 RefSeq gene 2755480 2756520 . + . ID=gene2460;Name=YPSIP31758_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13520;old_locus_tag=YpsIP31758_2443 NC_009708.1 Protein Homology CDS 2755480 2756520 . + 0 ID=cds2385;Parent=gene2460;Dbxref=Genbank:WP_012105326.1;Name=WP_012105326.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_012105326.1;transl_table=11 NC_009708.1 RefSeq gene 2756547 2757365 . + . ID=gene2461;Name=YPSIP31758_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13525;old_locus_tag=YpsIP31758_2444 NC_009708.1 Protein Homology CDS 2756547 2757365 . + 0 ID=cds2386;Parent=gene2461;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11 NC_009708.1 RefSeq gene 2757439 2759283 . - . ID=gene2462;Name=YPSIP31758_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13530;old_locus_tag=YpsIP31758_2445 NC_009708.1 Protein Homology CDS 2757439 2759283 . - 0 ID=cds2387;Parent=gene2462;Dbxref=Genbank:WP_012105327.1;Name=WP_012105327.1;gbkey=CDS;product=siderophore biosynthesis protein IucA;protein_id=WP_012105327.1;transl_table=11 NC_009708.1 RefSeq gene 2759280 2759858 . - . ID=gene2463;Name=YPSIP31758_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13535;old_locus_tag=YpsIP31758_2446 NC_009708.1 Protein Homology CDS 2759280 2759858 . - 0 ID=cds2388;Parent=gene2463;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11 NC_009708.1 RefSeq gene 2759858 2761156 . - . ID=gene2464;Name=YPSIP31758_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13540;old_locus_tag=YpsIP31758_2447 NC_009708.1 Protein Homology CDS 2759858 2761156 . - 0 ID=cds2389;Parent=gene2464;Dbxref=Genbank:WP_002211878.1;Name=WP_002211878.1;gbkey=CDS;product=lysine N6-hydroxylase/L-ornithine N5-oxygenase family;protein_id=WP_002211878.1;transl_table=11 NC_009708.1 RefSeq gene 2761191 2762738 . - . ID=gene2465;Name=YPSIP31758_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13545;old_locus_tag=YpsIP31758_2448 NC_009708.1 Protein Homology CDS 2761191 2762738 . - 0 ID=cds2390;Parent=gene2465;Dbxref=Genbank:WP_012105328.1;Name=WP_012105328.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_012105328.1;transl_table=11 NC_009708.1 RefSeq gene 2762889 2763668 . - . ID=gene2466;Name=YPSIP31758_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13550;old_locus_tag=YpsIP31758_2449 NC_009708.1 Protein Homology CDS 2762889 2763668 . - 0 ID=cds2391;Parent=gene2466;Dbxref=Genbank:WP_012105329.1;Name=WP_012105329.1;gbkey=CDS;product=iron reductase;protein_id=WP_012105329.1;transl_table=11 NC_009708.1 RefSeq gene 2764110 2765696 . + . ID=gene2467;Name=YPSIP31758_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13555;old_locus_tag=YpsIP31758_2450 NC_009708.1 Protein Homology CDS 2764110 2765696 . + 0 ID=cds2392;Parent=gene2467;Dbxref=Genbank:WP_011192111.1;Name=WP_011192111.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192111.1;transl_table=11 NC_009708.1 RefSeq gene 2765893 2767749 . - . ID=gene2468;Name=YPSIP31758_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13560;old_locus_tag=YpsIP31758_2451 NC_009708.1 Protein Homology CDS 2765893 2767749 . - 0 ID=cds2393;Parent=gene2468;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NC_009708.1 RefSeq gene 2767936 2768517 . - . ID=gene2469;Name=YPSIP31758_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13565;old_locus_tag=YpsIP31758_2452 NC_009708.1 Protein Homology CDS 2767936 2768517 . - 0 ID=cds2394;Parent=gene2469;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11 NC_009708.1 RefSeq gene 2768622 2769263 . - . ID=gene2470;Name=YPSIP31758_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13570;old_locus_tag=YpsIP31758_2453 NC_009708.1 Protein Homology CDS 2768622 2769263 . - 0 ID=cds2395;Parent=gene2470;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NC_009708.1 RefSeq gene 2769508 2770620 . - . ID=gene2471;Name=YPSIP31758_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13575;old_locus_tag=YpsIP31758_2454 NC_009708.1 Protein Homology CDS 2769508 2770620 . - 0 ID=cds2396;Parent=gene2471;Dbxref=Genbank:WP_002211871.1;Name=WP_002211871.1;gbkey=CDS;product=ATPase;protein_id=WP_002211871.1;transl_table=11 NC_009708.1 RefSeq gene 2770885 2772912 . + . ID=gene2472;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13580;old_locus_tag=YpsIP31758_2455 NC_009708.1 Protein Homology CDS 2770885 2772912 . + 0 ID=cds2397;Parent=gene2472;Dbxref=Genbank:WP_002211870.1;Name=WP_002211870.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_002211870.1;transl_table=11 NC_009708.1 RefSeq gene 2773041 2773703 . - . ID=gene2473;Name=YPSIP31758_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13585 NC_009708.1 Protein Homology CDS 2773041 2773703 . - 0 ID=cds2398;Parent=gene2473;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11 NC_009708.1 RefSeq gene 2774405 2775481 . + . ID=gene2474;Name=YPSIP31758_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13590;old_locus_tag=YpsIP31758_2457 NC_009708.1 Protein Homology CDS 2774405 2775481 . + 0 ID=cds2399;Parent=gene2474;Dbxref=Genbank:WP_012105330.1;Name=WP_012105330.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_012105330.1;transl_table=11 NC_009708.1 RefSeq gene 2775499 2776752 . + . ID=gene2475;Name=YPSIP31758_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13595;old_locus_tag=YpsIP31758_2458 NC_009708.1 Protein Homology CDS 2775499 2776752 . + 0 ID=cds2400;Parent=gene2475;Dbxref=Genbank:WP_011192108.1;Name=WP_011192108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192108.1;transl_table=11 NC_009708.1 RefSeq gene 2777066 2778247 . + . ID=gene2476;Name=YPSIP31758_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13600;old_locus_tag=YpsIP31758_2459 NC_009708.1 Protein Homology CDS 2777066 2778247 . + 0 ID=cds2401;Parent=gene2476;Dbxref=Genbank:WP_012105331.1;Name=WP_012105331.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012105331.1;transl_table=11 NC_009708.1 RefSeq gene 2778489 2778896 . + . ID=gene2477;Name=YPSIP31758_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13605;old_locus_tag=YpsIP31758_2460 NC_009708.1 Protein Homology CDS 2778489 2778896 . + 0 ID=cds2402;Parent=gene2477;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11 NC_009708.1 RefSeq gene 2778893 2779588 . + . ID=gene2478;Name=YPSIP31758_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13610;old_locus_tag=YpsIP31758_2461 NC_009708.1 Protein Homology CDS 2778893 2779588 . + 0 ID=cds2403;Parent=gene2478;Dbxref=Genbank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211970.1;transl_table=11 NC_009708.1 RefSeq gene 2779934 2780818 . + . ID=gene2479;Name=YPSIP31758_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13615;old_locus_tag=YpsIP31758_2462 NC_009708.1 Protein Homology CDS 2779934 2780818 . + 0 ID=cds2404;Parent=gene2479;Dbxref=Genbank:WP_002211969.1;Name=WP_002211969.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NC_009708.1 RefSeq gene 2781174 2782871 . + . ID=gene2480;Name=YPSIP31758_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13620;old_locus_tag=YpsIP31758_2463 NC_009708.1 Protein Homology CDS 2781174 2782871 . + 0 ID=cds2405;Parent=gene2480;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NC_009708.1 RefSeq gene 2783152 2783889 . + . ID=gene2481;Name=YPSIP31758_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13625;old_locus_tag=YpsIP31758_2464 NC_009708.1 Protein Homology CDS 2783152 2783889 . + 0 ID=cds2406;Parent=gene2481;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11 NC_009708.1 RefSeq gene 2784334 2785344 . - . ID=gene2482;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13630;old_locus_tag=YpsIP31758_2465 NC_009708.1 Protein Homology CDS 2784334 2785344 . - 0 ID=cds2407;Parent=gene2482;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11 NC_009708.1 RefSeq gene 2785365 2786885 . - . ID=gene2483;Name=YPSIP31758_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13635;old_locus_tag=YpsIP31758_2466 NC_009708.1 Protein Homology CDS 2785365 2786885 . - 0 ID=cds2408;Parent=gene2483;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NC_009708.1 RefSeq gene 2787115 2788107 . - . ID=gene2484;Name=YPSIP31758_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13640;old_locus_tag=YpsIP31758_2467 NC_009708.1 Protein Homology CDS 2787115 2788107 . - 0 ID=cds2409;Parent=gene2484;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11 NC_009708.1 RefSeq gene 2788855 2790021 . - . ID=gene2485;Name=YPSIP31758_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13645;old_locus_tag=YpsIP31758_2469 NC_009708.1 Protein Homology CDS 2788855 2790021 . - 0 ID=cds2410;Parent=gene2485;Dbxref=Genbank:WP_012105332.1;Name=WP_012105332.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105332.1;transl_table=11 NC_009708.1 RefSeq gene 2790076 2790738 . - . ID=gene2486;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13650;old_locus_tag=YpsIP31758_2470 NC_009708.1 Protein Homology CDS 2790076 2790738 . - 0 ID=cds2411;Parent=gene2486;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11 NC_009708.1 RefSeq gene 2790922 2792073 . - . ID=gene2487;Name=YPSIP31758_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13655;old_locus_tag=YpsIP31758_2471 NC_009708.1 Protein Homology CDS 2790922 2792073 . - 0 ID=cds2412;Parent=gene2487;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11 NC_009708.1 RefSeq gene 2792209 2793078 . + . ID=gene2488;Name=YPSIP31758_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13660;old_locus_tag=YpsIP31758_2472 NC_009708.1 Protein Homology CDS 2792209 2793078 . + 0 ID=cds2413;Parent=gene2488;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11 NC_009708.1 RefSeq gene 2793354 2794493 . + . ID=gene2489;Name=YPSIP31758_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13665;old_locus_tag=YpsIP31758_2473 NC_009708.1 Protein Homology CDS 2793354 2794493 . + 0 ID=cds2414;Parent=gene2489;Dbxref=Genbank:WP_002224699.1;Name=WP_002224699.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002224699.1;transl_table=11 NC_009708.1 RefSeq gene 2794514 2795356 . + . ID=gene2490;Name=YPSIP31758_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13670;old_locus_tag=YpsIP31758_2474 NC_009708.1 Protein Homology CDS 2794514 2795356 . + 0 ID=cds2415;Parent=gene2490;Dbxref=Genbank:WP_012105333.1;Name=WP_012105333.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_012105333.1;transl_table=11 NC_009708.1 RefSeq gene 2795625 2795825 . + . ID=gene2491;Name=YPSIP31758_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13675 NC_009708.1 Protein Homology CDS 2795625 2795825 . + 0 ID=cds2416;Parent=gene2491;Dbxref=Genbank:WP_041175777.1;Name=WP_041175777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175777.1;transl_table=11 NC_009708.1 RefSeq gene 2795909 2798269 . + . ID=gene2492;Name=YPSIP31758_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13680;old_locus_tag=YpsIP31758_2476 NC_009708.1 Protein Homology CDS 2795909 2798269 . + 0 ID=cds2417;Parent=gene2492;Dbxref=Genbank:WP_012105334.1;Name=WP_012105334.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105334.1;transl_table=11 NC_009708.1 RefSeq gene 2798271 2799533 . + . ID=gene2493;Name=YPSIP31758_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13685;old_locus_tag=YpsIP31758_2477 NC_009708.1 Protein Homology CDS 2798271 2799533 . + 0 ID=cds2418;Parent=gene2493;Dbxref=Genbank:WP_012105335.1;Name=WP_012105335.1;gbkey=CDS;product=RND transporter;protein_id=WP_012105335.1;transl_table=11 NC_009708.1 RefSeq gene 2799535 2800203 . + . ID=gene2494;Name=YPSIP31758_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13690;old_locus_tag=YpsIP31758_2478 NC_009708.1 Protein Homology CDS 2799535 2800203 . + 0 ID=cds2419;Parent=gene2494;Dbxref=Genbank:WP_012105336.1;Name=WP_012105336.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_012105336.1;transl_table=11 NC_009708.1 RefSeq gene 2800213 2801523 . + . ID=gene2495;Name=YPSIP31758_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13695;old_locus_tag=YpsIP31758_2479 NC_009708.1 Protein Homology CDS 2800213 2801523 . + 0 ID=cds2420;Parent=gene2495;Dbxref=Genbank:WP_011192099.1;Name=WP_011192099.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_011192099.1;transl_table=11 NC_009708.1 RefSeq gene 2802058 2803332 . + . ID=gene2496;Name=YPSIP31758_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13700;old_locus_tag=YpsIP31758_2480 NC_009708.1 Protein Homology CDS 2802058 2803332 . + 0 ID=cds2421;Parent=gene2496;Dbxref=Genbank:WP_012105337.1;Name=WP_012105337.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_012105337.1;transl_table=11 NC_009708.1 RefSeq gene 2803334 2804104 . + . ID=gene2497;Name=YPSIP31758_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13705;old_locus_tag=YpsIP31758_2481 NC_009708.1 Protein Homology CDS 2803334 2804104 . + 0 ID=cds2422;Parent=gene2497;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11 NC_009708.1 RefSeq gene 2804176 2804823 . - . ID=gene2498;Name=YPSIP31758_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13710;old_locus_tag=YpsIP31758_2482 NC_009708.1 Protein Homology CDS 2804176 2804823 . - 0 ID=cds2423;Parent=gene2498;Dbxref=Genbank:WP_012105338.1;Name=WP_012105338.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105338.1;transl_table=11 NC_009708.1 RefSeq gene 2805041 2806612 . - . ID=gene2499;Name=YPSIP31758_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13715;old_locus_tag=YpsIP31758_2483 NC_009708.1 Protein Homology CDS 2805041 2806612 . - 0 ID=cds2424;Parent=gene2499;Dbxref=Genbank:WP_032466234.1;Name=WP_032466234.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_032466234.1;transl_table=11 NC_009708.1 RefSeq gene 2807319 2807942 . + . ID=gene2500;Name=YPSIP31758_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13720;old_locus_tag=YpsIP31758_2484 NC_009708.1 Protein Homology CDS 2807319 2807942 . + 0 ID=cds2425;Parent=gene2500;Dbxref=Genbank:WP_012105340.1;Name=WP_012105340.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105340.1;transl_table=11 NC_009708.1 RefSeq gene 2808154 2809521 . - . ID=gene2501;Name=YPSIP31758_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13725;old_locus_tag=YpsIP31758_2485 NC_009708.1 Protein Homology CDS 2808154 2809521 . - 0 ID=cds2426;Parent=gene2501;Dbxref=Genbank:WP_012105341.1;Name=WP_012105341.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105341.1;transl_table=11 NC_009708.1 RefSeq gene 2809545 2809997 . - . ID=gene2502;Name=YPSIP31758_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13730;old_locus_tag=YpsIP31758_2486 NC_009708.1 Protein Homology CDS 2809545 2809997 . - 0 ID=cds2427;Parent=gene2502;Dbxref=Genbank:WP_002211943.1;Name=WP_002211943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211943.1;transl_table=11 NC_009708.1 RefSeq gene 2809997 2810578 . - . ID=gene2503;Name=YPSIP31758_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13735;old_locus_tag=YpsIP31758_2487 NC_009708.1 Protein Homology CDS 2809997 2810578 . - 0 ID=cds2428;Parent=gene2503;Dbxref=Genbank:WP_012105342.1;Name=WP_012105342.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_012105342.1;transl_table=11 NC_009708.1 RefSeq gene 2810553 2811638 . - . ID=gene2504;Name=YPSIP31758_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13740;old_locus_tag=YpsIP31758_2488 NC_009708.1 Protein Homology CDS 2810553 2811638 . - 0 ID=cds2429;Parent=gene2504;Dbxref=Genbank:WP_012105343.1;Name=WP_012105343.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105343.1;transl_table=11 NC_009708.1 RefSeq gene 2811602 2813365 . - . ID=gene2505;Name=YPSIP31758_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13745;old_locus_tag=YpsIP31758_2489 NC_009708.1 Protein Homology CDS 2811602 2813365 . - 0 ID=cds2430;Parent=gene2505;Dbxref=Genbank:WP_012105344.1;Name=WP_012105344.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_012105344.1;transl_table=11 NC_009708.1 RefSeq gene 2813457 2813915 . - . ID=gene2506;Name=YPSIP31758_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13750;old_locus_tag=YpsIP31758_2490 NC_009708.1 Protein Homology CDS 2813457 2813915 . - 0 ID=cds2431;Parent=gene2506;Dbxref=Genbank:WP_012105345.1;Name=WP_012105345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105345.1;transl_table=11 NC_009708.1 RefSeq gene 2813918 2814751 . - . ID=gene2507;Name=YPSIP31758_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13755 NC_009708.1 Protein Homology CDS 2813918 2814751 . - 0 ID=cds2432;Parent=gene2507;Dbxref=Genbank:WP_032466646.1;Name=WP_032466646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466646.1;transl_table=11 NC_009708.1 RefSeq gene 2815051 2816652 . - . ID=gene2508;Name=YPSIP31758_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13760;old_locus_tag=YpsIP31758_2492 NC_009708.1 Protein Homology CDS 2815051 2816652 . - 0 ID=cds2433;Parent=gene2508;Dbxref=Genbank:WP_012105347.1;Name=WP_012105347.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105347.1;transl_table=11 NC_009708.1 RefSeq gene 2816697 2817482 . - . ID=gene2509;Name=YPSIP31758_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13765;old_locus_tag=YpsIP31758_2493 NC_009708.1 Protein Homology CDS 2816697 2817482 . - 0 ID=cds2434;Parent=gene2509;Dbxref=Genbank:WP_049756384.1;Name=WP_049756384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756384.1;transl_table=11 NC_009708.1 RefSeq gene 2817531 2820572 . - . ID=gene2510;Name=YPSIP31758_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13770;old_locus_tag=YpsIP31758_2494 NC_009708.1 Protein Homology CDS 2817531 2820572 . - 0 ID=cds2435;Parent=gene2510;Dbxref=Genbank:WP_012105349.1;Name=WP_012105349.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105349.1;transl_table=11 NC_009708.1 RefSeq gene 2820654 2824076 . - . ID=gene2511;Name=YPSIP31758_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13775;old_locus_tag=YpsIP31758_2495 NC_009708.1 Protein Homology CDS 2820654 2824076 . - 0 ID=cds2436;Parent=gene2511;Dbxref=Genbank:WP_012105350.1;Name=WP_012105350.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_012105350.1;transl_table=11 NC_009708.1 RefSeq gene 2824073 2825305 . - . ID=gene2512;Name=YPSIP31758_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13780;old_locus_tag=YpsIP31758_2496 NC_009708.1 Protein Homology CDS 2824073 2825305 . - 0 ID=cds2437;Parent=gene2512;Dbxref=Genbank:WP_012105351.1;Name=WP_012105351.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105351.1;transl_table=11 NC_009708.1 RefSeq gene 2826417 2826737 . + . ID=gene2513;Name=YPSIP31758_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13785 NC_009708.1 Protein Homology CDS 2826417 2826737 . + 0 ID=cds2438;Parent=gene2513;Dbxref=Genbank:WP_002214561.1;Name=WP_002214561.1;gbkey=CDS;product=transposase;protein_id=WP_002214561.1;transl_table=11 NC_009708.1 RefSeq gene 2827470 2828117 . - . ID=gene2514;Name=YPSIP31758_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13790 NC_009708.1 Protein Homology CDS 2827470 2828117 . - 0 ID=cds2439;Parent=gene2514;Dbxref=Genbank:WP_033851509.1;Name=WP_033851509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033851509.1;transl_table=11 NC_009708.1 RefSeq gene 2828114 2829738 . - . ID=gene2515;Name=YPSIP31758_RS13795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS13795;old_locus_tag=YpsIP31758_2500;pseudo=true NC_009708.1 Protein Homology CDS 2828114 2829738 . - 0 ID=cds2440;Parent=gene2515;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2829754 2830014 . - . ID=gene2516;Name=YPSIP31758_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13800;old_locus_tag=YpsIP31758_2501 NC_009708.1 Protein Homology CDS 2829754 2830014 . - 0 ID=cds2441;Parent=gene2516;Dbxref=Genbank:WP_012105355.1;Name=WP_012105355.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105355.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2829838 2829981 . + . ID=id230;gbkey=repeat_region NC_009708.1 RefSeq gene 2830168 2830941 . - . ID=gene2517;Name=YPSIP31758_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13805;old_locus_tag=YpsIP31758_2502 NC_009708.1 Protein Homology CDS 2830168 2830941 . - 0 ID=cds2442;Parent=gene2517;Dbxref=Genbank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11 NC_009708.1 RefSeq gene 2830938 2833238 . - . ID=gene2518;Name=YPSIP31758_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13810;old_locus_tag=YpsIP31758_2503 NC_009708.1 Protein Homology CDS 2830938 2833238 . - 0 ID=cds2443;Parent=gene2518;Dbxref=Genbank:WP_012105356.1;Name=WP_012105356.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105356.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2831772 2833787 . + . ID=id231;gbkey=repeat_region NC_009708.1 RefSeq gene 2833254 2835602 . - . ID=gene2519;Name=YPSIP31758_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13815;old_locus_tag=YpsIP31758_2504 NC_009708.1 Protein Homology CDS 2833254 2835602 . - 0 ID=cds2444;Parent=gene2519;Dbxref=Genbank:WP_012105357.1;Name=WP_012105357.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012105357.1;transl_table=11 NC_009708.1 RefSeq gene 2835605 2838247 . - . ID=gene2520;Name=YPSIP31758_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13820;old_locus_tag=YpsIP31758_2505 NC_009708.1 Protein Homology CDS 2835605 2838247 . - 0 ID=cds2445;Parent=gene2520;Dbxref=Genbank:WP_012105358.1;Name=WP_012105358.1;gbkey=CDS;product=ATPase;protein_id=WP_012105358.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2835921 2836474 . + . ID=id232;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 2836562 2845339 . + . ID=id233;gbkey=repeat_region NC_009708.1 RefSeq gene 2838541 2839032 . - . ID=gene2521;Name=YPSIP31758_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13825;old_locus_tag=YpsIP31758_2506 NC_009708.1 Protein Homology CDS 2838541 2839032 . - 0 ID=cds2446;Parent=gene2521;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_009708.1 RefSeq gene 2839036 2840772 . - . ID=gene2522;Name=YPSIP31758_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13830;old_locus_tag=YpsIP31758_2507 NC_009708.1 Protein Homology CDS 2839036 2840772 . - 0 ID=cds2447;Parent=gene2522;Dbxref=Genbank:WP_012105359.1;Name=WP_012105359.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105359.1;transl_table=11 NC_009708.1 RefSeq gene 2840772 2841458 . - . ID=gene2523;Name=YPSIP31758_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13835;old_locus_tag=YpsIP31758_2508 NC_009708.1 Protein Homology CDS 2840772 2841458 . - 0 ID=cds2448;Parent=gene2523;Dbxref=Genbank:WP_012105360.1;Name=WP_012105360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105360.1;transl_table=11 NC_009708.1 RefSeq gene 2841455 2842807 . - . ID=gene2524;Name=YPSIP31758_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13840;old_locus_tag=YpsIP31758_2509 NC_009708.1 Protein Homology CDS 2841455 2842807 . - 0 ID=cds2449;Parent=gene2524;Dbxref=Genbank:WP_002222847.1;Name=WP_002222847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222847.1;transl_table=11 NC_009708.1 RefSeq gene 2842819 2844369 . - . ID=gene2525;Name=YPSIP31758_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13845;old_locus_tag=YpsIP31758_2510 NC_009708.1 Protein Homology CDS 2842819 2844369 . - 0 ID=cds2450;Parent=gene2525;Dbxref=Genbank:WP_012104583.1;Name=WP_012104583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104583.1;transl_table=11 NC_009708.1 RefSeq gene 2844412 2844912 . - . ID=gene2526;Name=YPSIP31758_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13850;old_locus_tag=YpsIP31758_2511 NC_009708.1 Protein Homology CDS 2844412 2844912 . - 0 ID=cds2451;Parent=gene2526;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_009708.1 RefSeq gene 2845577 2845744 . - . ID=gene2527;Name=YPSIP31758_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13855 NC_009708.1 Protein Homology CDS 2845577 2845744 . - 0 ID=cds2452;Parent=gene2527;Dbxref=Genbank:WP_002214708.1;Name=WP_002214708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214708.1;transl_table=11 NC_009708.1 RefSeq gene 2845901 2846749 . - . ID=gene2528;Name=YPSIP31758_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13860;old_locus_tag=YpsIP31758_2512 NC_009708.1 Protein Homology CDS 2845901 2846749 . - 0 ID=cds2453;Parent=gene2528;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11 NC_009708.1 RefSeq gene 2846848 2847096 . - . ID=gene2529;Name=YPSIP31758_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13865;old_locus_tag=YpsIP31758_2513 NC_009708.1 Protein Homology CDS 2846848 2847096 . - 0 ID=cds2454;Parent=gene2529;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11 NC_009708.1 RefSeq gene 2847134 2847466 . - . ID=gene2530;Name=YPSIP31758_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13870 NC_009708.1 Protein Homology CDS 2847134 2847466 . - 0 ID=cds2455;Parent=gene2530;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11 NC_009708.1 RefSeq gene 2847661 2848449 . - . ID=gene2531;Name=YPSIP31758_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13875;old_locus_tag=YpsIP31758_2515 NC_009708.1 Protein Homology CDS 2847661 2848449 . - 0 ID=cds2456;Parent=gene2531;Dbxref=Genbank:WP_012105361.1;Name=WP_012105361.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_012105361.1;transl_table=11 NC_009708.1 RefSeq gene 2848452 2849204 . - . ID=gene2532;Name=YPSIP31758_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13880;old_locus_tag=YpsIP31758_2516 NC_009708.1 Protein Homology CDS 2848452 2849204 . - 0 ID=cds2457;Parent=gene2532;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11 NC_009708.1 RefSeq gene 2849206 2849925 . - . ID=gene2533;Name=YPSIP31758_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13885;old_locus_tag=YpsIP31758_2517 NC_009708.1 Protein Homology CDS 2849206 2849925 . - 0 ID=cds2458;Parent=gene2533;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11 NC_009708.1 RefSeq gene 2849918 2851156 . - . ID=gene2534;Name=YPSIP31758_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13890;old_locus_tag=YpsIP31758_2518 NC_009708.1 Protein Homology CDS 2849918 2851156 . - 0 ID=cds2459;Parent=gene2534;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11 NC_009708.1 RefSeq gene 2851172 2851909 . - . ID=gene2535;Name=YPSIP31758_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13895;old_locus_tag=YpsIP31758_2519 NC_009708.1 Protein Homology CDS 2851172 2851909 . - 0 ID=cds2460;Parent=gene2535;Dbxref=Genbank:WP_012105362.1;Name=WP_012105362.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_012105362.1;transl_table=11 NC_009708.1 RefSeq gene 2851911 2853194 . - . ID=gene2536;Name=YPSIP31758_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13900;old_locus_tag=YpsIP31758_2520 NC_009708.1 Protein Homology CDS 2851911 2853194 . - 0 ID=cds2461;Parent=gene2536;Dbxref=Genbank:WP_012105363.1;Name=WP_012105363.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_012105363.1;transl_table=11 NC_009708.1 RefSeq gene 2853184 2853708 . - . ID=gene2537;Name=YPSIP31758_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13905;old_locus_tag=YpsIP31758_2521 NC_009708.1 Protein Homology CDS 2853184 2853708 . - 0 ID=cds2462;Parent=gene2537;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11 NC_009708.1 RefSeq gene 2853972 2854190 . - . ID=gene2538;Name=YPSIP31758_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13910 NC_009708.1 Protein Homology CDS 2853972 2854190 . - 0 ID=cds2463;Parent=gene2538;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NC_009708.1 RefSeq gene 2854921 2855667 . + . ID=gene2539;Name=YPSIP31758_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13915;old_locus_tag=YpsIP31758_2523 NC_009708.1 Protein Homology CDS 2854921 2855667 . + 0 ID=cds2464;Parent=gene2539;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11 NC_009708.1 RefSeq gene 2855821 2858237 . + . ID=gene2540;Name=YPSIP31758_RS13920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS13920;pseudo=true NC_009708.1 Protein Homology CDS 2855821 2858237 . + 0 ID=cds2465;Parent=gene2540;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2858671 2859501 . - . ID=gene2541;Name=YPSIP31758_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13925 NC_009708.1 Protein Homology CDS 2858671 2859501 . - 0 ID=cds2466;Parent=gene2541;Dbxref=Genbank:WP_041175875.1;Name=WP_041175875.1;gbkey=CDS;product=cytotoxic necrotizing factor;protein_id=WP_041175875.1;transl_table=11 NC_009708.1 RefSeq gene 2859516 2859767 . - . ID=gene2542;Name=YPSIP31758_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13930 NC_009708.1 Protein Homology CDS 2859516 2859767 . - 0 ID=cds2467;Parent=gene2542;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11 NC_009708.1 RefSeq gene 2859801 2860157 . - . ID=gene2543;Name=YPSIP31758_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13935 NC_009708.1 Protein Homology CDS 2859801 2860157 . - 0 ID=cds2468;Parent=gene2543;Dbxref=Genbank:WP_041175778.1;Name=WP_041175778.1;gbkey=CDS;product=cytotoxic necrotizing factor;protein_id=WP_041175778.1;transl_table=11 NC_009708.1 RefSeq gene 2860527 2860814 . - . ID=gene2544;Name=YPSIP31758_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13940 NC_009708.1 Protein Homology CDS 2860527 2860814 . - 0 ID=cds2469;Parent=gene2544;Dbxref=Genbank:WP_002228572.1;Name=WP_002228572.1;gbkey=CDS;product=integrase;protein_id=WP_002228572.1;transl_table=11 NC_009708.1 RefSeq gene 2861233 2861320 . - . ID=gene2545;Name=YPSIP31758_RS13945;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS13945;old_locus_tag=YpsIP31758_4242 NC_009708.1 tRNAscan-SE tRNA 2861233 2861320 . - . ID=rna70;Parent=gene2545;anticodon=(pos:complement(2861284..2861286));gbkey=tRNA;product=tRNA-Ser NC_009708.1 tRNAscan-SE exon 2861233 2861320 . - . ID=id234;Parent=rna70;anticodon=(pos:complement(2861284..2861286));gbkey=tRNA;product=tRNA-Ser NC_009708.1 RefSeq gene 2861561 2861890 . + . ID=gene2546;Name=YPSIP31758_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13950;old_locus_tag=YpsIP31758_2529 NC_009708.1 Protein Homology CDS 2861561 2861890 . + 0 ID=cds2470;Parent=gene2546;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NC_009708.1 RefSeq gene 2861942 2862220 . - . ID=gene2547;Name=YPSIP31758_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13955;old_locus_tag=YpsIP31758_2530 NC_009708.1 Protein Homology CDS 2861942 2862220 . - 0 ID=cds2471;Parent=gene2547;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NC_009708.1 RefSeq gene 2862314 2863504 . + . ID=gene2548;Name=YPSIP31758_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13960;old_locus_tag=YpsIP31758_2531 NC_009708.1 Protein Homology CDS 2862314 2863504 . + 0 ID=cds2472;Parent=gene2548;Dbxref=Genbank:WP_012105365.1;Name=WP_012105365.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_012105365.1;transl_table=11 NC_009708.1 RefSeq gene 2863565 2863882 . + . ID=gene2549;Name=YPSIP31758_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13965;old_locus_tag=YpsIP31758_2532 NC_009708.1 Protein Homology CDS 2863565 2863882 . + 0 ID=cds2473;Parent=gene2549;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NC_009708.1 RefSeq gene 2863991 2864407 . - . ID=gene2550;Name=YPSIP31758_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13970;old_locus_tag=YpsIP31758_2533 NC_009708.1 Protein Homology CDS 2863991 2864407 . - 0 ID=cds2474;Parent=gene2550;Dbxref=Genbank:WP_012105366.1;Name=WP_012105366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105366.1;transl_table=11 NC_009708.1 RefSeq gene 2864723 2865403 . + . ID=gene2551;Name=YPSIP31758_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13975;old_locus_tag=YpsIP31758_2534 NC_009708.1 Protein Homology CDS 2864723 2865403 . + 0 ID=cds2475;Parent=gene2551;Dbxref=Genbank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213058.1;transl_table=11 NC_009708.1 RefSeq gene 2865582 2866046 . + . ID=gene2552;Name=YPSIP31758_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13980;old_locus_tag=YpsIP31758_2535 NC_009708.1 Protein Homology CDS 2865582 2866046 . + 0 ID=cds2476;Parent=gene2552;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NC_009708.1 RefSeq gene 2866107 2868161 . - . ID=gene2553;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13985;old_locus_tag=YpsIP31758_2536 NC_009708.1 Protein Homology CDS 2866107 2868161 . - 0 ID=cds2477;Parent=gene2553;Dbxref=Genbank:WP_011192072.1;Name=WP_011192072.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_011192072.1;transl_table=11 NC_009708.1 RefSeq gene 2868355 2868801 . + . ID=gene2554;Name=YPSIP31758_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13990;old_locus_tag=YpsIP31758_2537 NC_009708.1 Protein Homology CDS 2868355 2868801 . + 0 ID=cds2478;Parent=gene2554;Dbxref=Genbank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213062.1;transl_table=11 NC_009708.1 RefSeq gene 2868831 2870969 . + . ID=gene2555;Name=YPSIP31758_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS13995;old_locus_tag=YpsIP31758_2538 NC_009708.1 Protein Homology CDS 2868831 2870969 . + 0 ID=cds2479;Parent=gene2555;Dbxref=Genbank:WP_011192070.1;Name=WP_011192070.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192070.1;transl_table=11 NC_009708.1 RefSeq gene 2871071 2871706 . - . ID=gene2556;Name=YPSIP31758_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14000;old_locus_tag=YpsIP31758_2539 NC_009708.1 Protein Homology CDS 2871071 2871706 . - 0 ID=cds2480;Parent=gene2556;Dbxref=Genbank:WP_002213064.1;Name=WP_002213064.1;gbkey=CDS;product=DNA transformation protein tfoX;protein_id=WP_002213064.1;transl_table=11 NC_009708.1 RefSeq gene 2871935 2872441 . + . ID=gene2557;Name=YPSIP31758_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14005;old_locus_tag=YpsIP31758_2540 NC_009708.1 Protein Homology CDS 2871935 2872441 . + 0 ID=cds2481;Parent=gene2557;Dbxref=Genbank:WP_011192069.1;Name=WP_011192069.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_011192069.1;transl_table=11 NC_009708.1 RefSeq gene 2872676 2873884 . - . ID=gene2558;Name=YPSIP31758_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14010;old_locus_tag=YpsIP31758_2541 NC_009708.1 Protein Homology CDS 2872676 2873884 . - 0 ID=cds2482;Parent=gene2558;Dbxref=Genbank:WP_006250222.1;Name=WP_006250222.1;gbkey=CDS;product=transposase;protein_id=WP_006250222.1;transl_table=11 NC_009708.1 RefSeq gene 2873877 2873946 . + . ID=gene2559;Name=YPSIP31758_RS22470;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22470 NC_009708.1 RefSeq transcript 2873877 2873946 . + . ID=rna71;Parent=gene2559;gbkey=misc_RNA;product=RNA-OUT NC_009708.1 RefSeq exon 2873877 2873946 . + . ID=id235;Parent=rna71;gbkey=misc_RNA;product=RNA-OUT NC_009708.1 RefSeq gene 2874137 2875198 . + . ID=gene2560;Name=YPSIP31758_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14015;old_locus_tag=YpsIP31758_2542 NC_009708.1 Protein Homology CDS 2874137 2875198 . + 0 ID=cds2483;Parent=gene2560;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2875236 2875955 . + . ID=id236;gbkey=repeat_region NC_009708.1 RefSeq gene 2875243 2875398 . + . ID=gene2561;Name=YPSIP31758_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14020 NC_009708.1 Protein Homology CDS 2875243 2875398 . + 0 ID=cds2484;Parent=gene2561;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_009708.1 RefSeq gene 2875388 2875846 . + . ID=gene2562;Name=YPSIP31758_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14025;old_locus_tag=YpsIP31758_2543 NC_009708.1 Protein Homology CDS 2875388 2875846 . + 0 ID=cds2485;Parent=gene2562;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 2876015 2876470 . - . ID=gene2563;Name=YPSIP31758_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14030;old_locus_tag=YpsIP31758_2544 NC_009708.1 Protein Homology CDS 2876015 2876470 . - 0 ID=cds2486;Parent=gene2563;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11 NC_009708.1 RefSeq gene 2876681 2878432 . + . ID=gene2564;Name=YPSIP31758_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14035;old_locus_tag=YpsIP31758_2545 NC_009708.1 Protein Homology CDS 2876681 2878432 . + 0 ID=cds2487;Parent=gene2564;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11 NC_009708.1 RefSeq gene 2878501 2879019 . + . ID=gene2565;Name=YPSIP31758_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14040;old_locus_tag=YpsIP31758_2546 NC_009708.1 Protein Homology CDS 2878501 2879019 . + 0 ID=cds2488;Parent=gene2565;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11 NC_009708.1 RefSeq gene 2879285 2879473 . - . ID=gene2566;Name=YPSIP31758_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14045 NC_009708.1 Protein Homology CDS 2879285 2879473 . - 0 ID=cds2489;Parent=gene2566;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11 NC_009708.1 RefSeq gene 2879719 2880993 . + . ID=gene2567;Name=YPSIP31758_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14050;old_locus_tag=YpsIP31758_2547 NC_009708.1 Protein Homology CDS 2879719 2880993 . + 0 ID=cds2490;Parent=gene2567;Dbxref=Genbank:WP_012105370.1;Name=WP_012105370.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_012105370.1;transl_table=11 NC_009708.1 RefSeq gene 2881055 2881222 . - . ID=gene2568;Name=YPSIP31758_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14055 NC_009708.1 Protein Homology CDS 2881055 2881222 . - 0 ID=cds2491;Parent=gene2568;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NC_009708.1 RefSeq gene 2881303 2881443 . - . ID=gene2569;Name=YPSIP31758_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14060 NC_009708.1 Protein Homology CDS 2881303 2881443 . - 0 ID=cds2492;Parent=gene2569;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11 NC_009708.1 RefSeq gene 2881492 2882070 . - . ID=gene2570;Name=YPSIP31758_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14065;old_locus_tag=YpsIP31758_2548 NC_009708.1 Protein Homology CDS 2881492 2882070 . - 0 ID=cds2493;Parent=gene2570;Dbxref=Genbank:WP_012105371.1;Name=WP_012105371.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105371.1;transl_table=11 NC_009708.1 RefSeq gene 2882067 2883719 . - . ID=gene2571;Name=YPSIP31758_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14070;old_locus_tag=YpsIP31758_2549 NC_009708.1 Protein Homology CDS 2882067 2883719 . - 0 ID=cds2494;Parent=gene2571;Dbxref=Genbank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_002211290.1;transl_table=11 NC_009708.1 RefSeq gene 2883706 2884923 . - . ID=gene2572;Name=YPSIP31758_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14075;old_locus_tag=YpsIP31758_2550 NC_009708.1 Protein Homology CDS 2883706 2884923 . - 0 ID=cds2495;Parent=gene2572;Dbxref=Genbank:WP_041175876.1;Name=WP_041175876.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_041175876.1;transl_table=11 NC_009708.1 RefSeq gene 2885121 2887034 . - . ID=gene2573;Name=YPSIP31758_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14080;old_locus_tag=YpsIP31758_2551 NC_009708.1 Protein Homology CDS 2885121 2887034 . - 0 ID=cds2496;Parent=gene2573;Dbxref=Genbank:WP_012105373.1;Name=WP_012105373.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_012105373.1;transl_table=11 NC_009708.1 RefSeq gene 2887040 2889160 . - . ID=gene2574;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14085;old_locus_tag=YpsIP31758_2552 NC_009708.1 Protein Homology CDS 2887040 2889160 . - 0 ID=cds2497;Parent=gene2574;Dbxref=Genbank:WP_011192066.1;Name=WP_011192066.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_011192066.1;transl_table=11 NC_009708.1 RefSeq gene 2889263 2890372 . + . ID=gene2575;Name=YPSIP31758_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14090;old_locus_tag=YpsIP31758_2553 NC_009708.1 Protein Homology CDS 2889263 2890372 . + 0 ID=cds2498;Parent=gene2575;Dbxref=Genbank:WP_002363919.1;Name=WP_002363919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002363919.1;transl_table=11 NC_009708.1 RefSeq gene 2890398 2890949 . - . ID=gene2576;Name=YPSIP31758_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14095;old_locus_tag=YpsIP31758_2554 NC_009708.1 Protein Homology CDS 2890398 2890949 . - 0 ID=cds2499;Parent=gene2576;Dbxref=Genbank:WP_011192064.1;Name=WP_011192064.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_011192064.1;transl_table=11 NC_009708.1 RefSeq gene 2891132 2892142 . - . ID=gene2577;Name=YPSIP31758_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14100;old_locus_tag=YpsIP31758_2555 NC_009708.1 Protein Homology CDS 2891132 2892142 . - 0 ID=cds2500;Parent=gene2577;Dbxref=Genbank:WP_002211296.1;Name=WP_002211296.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11 NC_009708.1 RefSeq gene 2892805 2895420 . - . ID=gene2578;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14105;old_locus_tag=YpsIP31758_2556 NC_009708.1 Protein Homology CDS 2892805 2895420 . - 0 ID=cds2501;Parent=gene2578;Dbxref=Genbank:WP_012105374.1;Name=WP_012105374.1;gbkey=CDS;gene=pepN;product=aminopeptidase N;protein_id=WP_012105374.1;transl_table=11 NC_009708.1 RefSeq gene 2896134 2897339 . + . ID=gene2579;Name=YPSIP31758_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14110;old_locus_tag=YpsIP31758_2557 NC_009708.1 Protein Homology CDS 2896134 2897339 . + 0 ID=cds2502;Parent=gene2579;Dbxref=Genbank:WP_002228013.1;Name=WP_002228013.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NC_009708.1 RefSeq gene 2897838 2899238 . + . ID=gene2580;Name=YPSIP31758_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14115;old_locus_tag=YpsIP31758_2558 NC_009708.1 Protein Homology CDS 2897838 2899238 . + 0 ID=cds2503;Parent=gene2580;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NC_009708.1 RefSeq gene 2899539 2900618 . + . ID=gene2581;Name=YPSIP31758_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14120;old_locus_tag=YpsIP31758_2559 NC_009708.1 Protein Homology CDS 2899539 2900618 . + 0 ID=cds2504;Parent=gene2581;Dbxref=Genbank:WP_041175877.1;Name=WP_041175877.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_041175877.1;transl_table=11 NC_009708.1 RefSeq gene 2900875 2902065 . + . ID=gene2582;Name=YPSIP31758_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14125;old_locus_tag=YpsIP31758_2560 NC_009708.1 Protein Homology CDS 2900875 2902065 . + 0 ID=cds2505;Parent=gene2582;Dbxref=Genbank:WP_002211303.1;Name=WP_002211303.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2902119 2902290 . + . ID=id237;gbkey=repeat_region NC_009708.1 RefSeq gene 2902489 2903136 . - . ID=gene2583;Name=YPSIP31758_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14130;old_locus_tag=YpsIP31758_2561 NC_009708.1 Protein Homology CDS 2902489 2903136 . - 0 ID=cds2506;Parent=gene2583;Dbxref=Genbank:WP_011192061.1;Name=WP_011192061.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192061.1;transl_table=11 NC_009708.1 RefSeq gene 2903197 2903745 . - . ID=gene2584;Name=YPSIP31758_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14135;old_locus_tag=YpsIP31758_2562 NC_009708.1 Protein Homology CDS 2903197 2903745 . - 0 ID=cds2507;Parent=gene2584;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11 NC_009708.1 RefSeq gene 2903969 2905825 . - . ID=gene2585;Name=YPSIP31758_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14140;old_locus_tag=YpsIP31758_2563 NC_009708.1 Protein Homology CDS 2903969 2905825 . - 0 ID=cds2508;Parent=gene2585;Dbxref=Genbank:WP_002217987.1;Name=WP_002217987.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002217987.1;transl_table=11 NC_009708.1 RefSeq gene 2906073 2910530 . - . ID=gene2586;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14145;old_locus_tag=YpsIP31758_2565 NC_009708.1 Protein Homology CDS 2906073 2910530 . - 0 ID=cds2509;Parent=gene2586;Dbxref=Genbank:WP_012105376.1;Name=WP_012105376.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_012105376.1;transl_table=11 NC_009708.1 RefSeq gene 2910527 2911255 . - . ID=gene2587;Name=YPSIP31758_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14150;old_locus_tag=YpsIP31758_2566 NC_009708.1 Protein Homology CDS 2910527 2911255 . - 0 ID=cds2510;Parent=gene2587;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11 NC_009708.1 RefSeq gene 2911236 2912558 . - . ID=gene2588;Name=YPSIP31758_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14155;old_locus_tag=YpsIP31758_2567 NC_009708.1 Protein Homology CDS 2911236 2912558 . - 0 ID=cds2511;Parent=gene2588;Dbxref=Genbank:WP_002211310.1;Name=WP_002211310.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NC_009708.1 RefSeq gene 2912555 2913340 . - . ID=gene2589;Name=YPSIP31758_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14160;old_locus_tag=YpsIP31758_2568 NC_009708.1 Protein Homology CDS 2912555 2913340 . - 0 ID=cds2512;Parent=gene2589;Dbxref=Genbank:WP_012105377.1;Name=WP_012105377.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_012105377.1;transl_table=11 NC_009708.1 RefSeq gene 2913586 2913738 . + . ID=gene2590;Name=YPSIP31758_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14165;old_locus_tag=YpsIP31758_2569 NC_009708.1 Protein Homology CDS 2913586 2913738 . + 0 ID=cds2513;Parent=gene2590;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11 NC_009708.1 RefSeq gene 2914132 2915025 . - . ID=gene2591;Name=YPSIP31758_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14170;old_locus_tag=YpsIP31758_2570 NC_009708.1 Protein Homology CDS 2914132 2915025 . - 0 ID=cds2514;Parent=gene2591;Dbxref=Genbank:WP_012105378.1;Name=WP_012105378.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105378.1;transl_table=11 NC_009708.1 RefSeq gene 2915388 2916140 . - . ID=gene2592;Name=YPSIP31758_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14175;old_locus_tag=YpsIP31758_2571 NC_009708.1 Protein Homology CDS 2915388 2916140 . - 0 ID=cds2515;Parent=gene2592;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NC_009708.1 RefSeq gene 2916137 2916319 . - . ID=gene2593;Name=YPSIP31758_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14180;old_locus_tag=YpsIP31758_2572 NC_009708.1 Protein Homology CDS 2916137 2916319 . - 0 ID=cds2516;Parent=gene2593;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11 NC_009708.1 RefSeq gene 2916867 2917076 . - . ID=gene2594;Name=YPSIP31758_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14185;old_locus_tag=YpsIP31758_2574 NC_009708.1 Protein Homology CDS 2916867 2917076 . - 0 ID=cds2517;Parent=gene2594;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NC_009708.1 RefSeq gene 2917314 2917511 . + . ID=gene2595;Name=YPSIP31758_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14190 NC_009708.1 Protein Homology CDS 2917314 2917511 . + 0 ID=cds2518;Parent=gene2595;Dbxref=Genbank:WP_015683832.1;Name=WP_015683832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683832.1;transl_table=11 NC_009708.1 RefSeq gene 2917795 2919231 . + . ID=gene2596;Name=YPSIP31758_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14195;old_locus_tag=YpsIP31758_2575 NC_009708.1 Protein Homology CDS 2917795 2919231 . + 0 ID=cds2519;Parent=gene2596;Dbxref=Genbank:WP_012105380.1;Name=WP_012105380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105380.1;transl_table=11 NC_009708.1 RefSeq gene 2919239 2920225 . - . ID=gene2597;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14200;old_locus_tag=YpsIP31758_2576 NC_009708.1 Protein Homology CDS 2919239 2920225 . - 0 ID=cds2520;Parent=gene2597;Dbxref=Genbank:WP_002211319.1;Name=WP_002211319.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NC_009708.1 RefSeq gene 2920222 2921970 . - . ID=gene2598;Name=YPSIP31758_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14205;old_locus_tag=YpsIP31758_2577 NC_009708.1 Protein Homology CDS 2920222 2921970 . - 0 ID=cds2521;Parent=gene2598;Dbxref=Genbank:WP_002211320.1;Name=WP_002211320.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_002211320.1;transl_table=11 NC_009708.1 RefSeq gene 2922006 2924297 . - . ID=gene2599;Name=YPSIP31758_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14210;old_locus_tag=YpsIP31758_2578 NC_009708.1 Protein Homology CDS 2922006 2924297 . - 0 ID=cds2522;Parent=gene2599;Dbxref=Genbank:WP_012105381.1;Name=WP_012105381.1;gbkey=CDS;product=competence protein ComEC;protein_id=WP_012105381.1;transl_table=11 NC_009708.1 RefSeq gene 2924572 2924875 . + . ID=gene2600;Name=YPSIP31758_RS14215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS14215;pseudo=true NC_009708.1 Protein Homology CDS 2924572 2924875 . + 0 ID=cds2523;Parent=gene2600;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 2924859 2925143 . - . ID=gene2601;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14220;old_locus_tag=YpsIP31758_2579 NC_009708.1 Protein Homology CDS 2924859 2925143 . - 0 ID=cds2524;Parent=gene2601;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NC_009708.1 RefSeq gene 2925204 2926877 . - . ID=gene2602;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14225;old_locus_tag=YpsIP31758_2580 NC_009708.1 Protein Homology CDS 2925204 2926877 . - 0 ID=cds2525;Parent=gene2602;Dbxref=Genbank:WP_011192057.1;Name=WP_011192057.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_011192057.1;transl_table=11 NC_009708.1 RefSeq gene 2927051 2927743 . - . ID=gene2603;Name=YPSIP31758_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14230;old_locus_tag=YpsIP31758_2581 NC_009708.1 Protein Homology CDS 2927051 2927743 . - 0 ID=cds2526;Parent=gene2603;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11 NC_009708.1 RefSeq gene 2928056 2929342 . - . ID=gene2604;Name=YPSIP31758_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14235;old_locus_tag=YpsIP31758_2582 NC_009708.1 Protein Homology CDS 2928056 2929342 . - 0 ID=cds2527;Parent=gene2604;Dbxref=Genbank:WP_011192056.1;Name=WP_011192056.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_011192056.1;transl_table=11 NC_009708.1 RefSeq gene 2929520 2930605 . - . ID=gene2605;Name=YPSIP31758_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14240;old_locus_tag=YpsIP31758_2583 NC_009708.1 Protein Homology CDS 2929520 2930605 . - 0 ID=cds2528;Parent=gene2605;Dbxref=Genbank:WP_012105382.1;Name=WP_012105382.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_012105382.1;transl_table=11 NC_009708.1 RefSeq gene 2930972 2932819 . - . ID=gene2606;Name=YPSIP31758_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14245;old_locus_tag=YpsIP31758_2584 NC_009708.1 Protein Homology CDS 2930972 2932819 . - 0 ID=cds2529;Parent=gene2606;Dbxref=Genbank:WP_012105383.1;Name=WP_012105383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105383.1;transl_table=11 NC_009708.1 RefSeq gene 2932840 2933934 . - . ID=gene2607;Name=YPSIP31758_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14250;old_locus_tag=YpsIP31758_2585 NC_009708.1 Protein Homology CDS 2932840 2933934 . - 0 ID=cds2530;Parent=gene2607;Dbxref=Genbank:WP_012105384.1;Name=WP_012105384.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_012105384.1;transl_table=11 NC_009708.1 RefSeq gene 2934253 2935290 . - . ID=gene2608;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14255;old_locus_tag=YpsIP31758_2586 NC_009708.1 Protein Homology CDS 2934253 2935290 . - 0 ID=cds2531;Parent=gene2608;Dbxref=Genbank:WP_011192052.1;Name=WP_011192052.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=WP_011192052.1;transl_table=11 NC_009708.1 RefSeq gene 2935439 2937205 . + . ID=gene2609;Name=YPSIP31758_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14260;old_locus_tag=YpsIP31758_2587 NC_009708.1 Protein Homology CDS 2935439 2937205 . + 0 ID=cds2532;Parent=gene2609;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11 NC_009708.1 RefSeq gene 2937902 2938759 . + . ID=gene2610;Name=YPSIP31758_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14265;old_locus_tag=YpsIP31758_2588 NC_009708.1 Protein Homology CDS 2937902 2938759 . + 0 ID=cds2533;Parent=gene2610;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NC_009708.1 RefSeq gene 2938815 2941097 . + . ID=gene2611;Name=YPSIP31758_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14270;old_locus_tag=YpsIP31758_2589 NC_009708.1 Protein Homology CDS 2938815 2941097 . + 0 ID=cds2534;Parent=gene2611;Dbxref=Genbank:WP_002211332.1;Name=WP_002211332.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=keto-acid formate acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NC_009708.1 RefSeq gene 2941215 2941889 . - . ID=gene2612;Name=YPSIP31758_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14275;old_locus_tag=YpsIP31758_2590 NC_009708.1 Protein Homology CDS 2941215 2941889 . - 0 ID=cds2535;Parent=gene2612;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11 NC_009708.1 RefSeq gene 2942876 2943610 . + . ID=gene2613;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14280;old_locus_tag=YpsIP31758_2591 NC_009708.1 Protein Homology CDS 2942876 2943610 . + 0 ID=cds2536;Parent=gene2613;Dbxref=Genbank:WP_002211334.1;Name=WP_002211334.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating protein;protein_id=WP_002211334.1;transl_table=11 NC_009708.1 RefSeq gene 2943764 2944912 . - . ID=gene2614;Name=YPSIP31758_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14285;old_locus_tag=YpsIP31758_2592 NC_009708.1 Protein Homology CDS 2943764 2944912 . - 0 ID=cds2537;Parent=gene2614;Dbxref=Genbank:WP_002211335.1;Name=WP_002211335.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211335.1;transl_table=11 NC_009708.1 RefSeq gene 2945143 2946435 . - . ID=gene2615;Name=YPSIP31758_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14290;old_locus_tag=YpsIP31758_2593 NC_009708.1 Protein Homology CDS 2945143 2946435 . - 0 ID=cds2538;Parent=gene2615;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NC_009708.1 RefSeq gene 2946677 2948020 . - . ID=gene2616;Name=YPSIP31758_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14295;old_locus_tag=YpsIP31758_2594 NC_009708.1 Protein Homology CDS 2946677 2948020 . - 0 ID=cds2539;Parent=gene2616;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11 NC_009708.1 RefSeq gene 2948031 2948639 . - . ID=gene2617;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14300;old_locus_tag=YpsIP31758_2595 NC_009708.1 Protein Homology CDS 2948031 2948639 . - 0 ID=cds2540;Parent=gene2617;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11 NC_009708.1 RefSeq gene 2948829 2952761 . - . ID=gene2618;Name=YPSIP31758_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14305;old_locus_tag=YpsIP31758_2596 NC_009708.1 Protein Homology CDS 2948829 2952761 . - 0 ID=cds2541;Parent=gene2618;Dbxref=Genbank:WP_012105385.1;Name=WP_012105385.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_012105385.1;transl_table=11 NC_009708.1 RefSeq gene 2952884 2953378 . - . ID=gene2619;Name=YPSIP31758_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14310;old_locus_tag=YpsIP31758_2597 NC_009708.1 Protein Homology CDS 2952884 2953378 . - 0 ID=cds2542;Parent=gene2619;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11 NC_009708.1 RefSeq gene 2954146 2955108 . + . ID=gene2620;Name=YPSIP31758_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14315;old_locus_tag=YpsIP31758_2598 NC_009708.1 Protein Homology CDS 2954146 2955108 . + 0 ID=cds2543;Parent=gene2620;Dbxref=Genbank:WP_002211341.1;Name=WP_002211341.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_002211341.1;transl_table=11 NC_009708.1 RefSeq gene 2955213 2955350 . - . ID=gene2621;Name=YPSIP31758_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14320;old_locus_tag=YpsIP31758_2599 NC_009708.1 Protein Homology CDS 2955213 2955350 . - 0 ID=cds2544;Parent=gene2621;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11 NC_009708.1 RefSeq gene 2955567 2957333 . + . ID=gene2622;Name=YPSIP31758_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14325;old_locus_tag=YpsIP31758_2600 NC_009708.1 Protein Homology CDS 2955567 2957333 . + 0 ID=cds2545;Parent=gene2622;Dbxref=Genbank:WP_012105386.1;Name=WP_012105386.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_012105386.1;transl_table=11 NC_009708.1 RefSeq gene 2957336 2959060 . + . ID=gene2623;Name=YPSIP31758_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14330;old_locus_tag=YpsIP31758_2601 NC_009708.1 Protein Homology CDS 2957336 2959060 . + 0 ID=cds2546;Parent=gene2623;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11 NC_009708.1 RefSeq gene 2959279 2959989 . + . ID=gene2624;Name=YPSIP31758_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14335;old_locus_tag=YpsIP31758_2603 NC_009708.1 Protein Homology CDS 2959279 2959989 . + 0 ID=cds2547;Parent=gene2624;Dbxref=Genbank:WP_002211346.1;Name=WP_002211346.1;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NC_009708.1 RefSeq gene 2960155 2960373 . + . ID=gene2625;Name=YPSIP31758_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14340;old_locus_tag=YpsIP31758_2604 NC_009708.1 Protein Homology CDS 2960155 2960373 . + 0 ID=cds2548;Parent=gene2625;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NC_009708.1 RefSeq gene 2960786 2963062 . - . ID=gene2626;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14345;old_locus_tag=YpsIP31758_2606 NC_009708.1 Protein Homology CDS 2960786 2963062 . - 0 ID=cds2549;Parent=gene2626;Dbxref=Genbank:WP_011192049.1;Name=WP_011192049.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011192049.1;transl_table=11 NC_009708.1 RefSeq gene 2963088 2963408 . - . ID=gene2627;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14350;old_locus_tag=YpsIP31758_2607 NC_009708.1 Protein Homology CDS 2963088 2963408 . - 0 ID=cds2550;Parent=gene2627;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11 NC_009708.1 RefSeq gene 2963769 2964032 . + . ID=gene2628;Name=YPSIP31758_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14355;old_locus_tag=YpsIP31758_2609 NC_009708.1 Protein Homology CDS 2963769 2964032 . + 0 ID=cds2551;Parent=gene2628;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11 NC_009708.1 RefSeq gene 2964330 2966279 . - . ID=gene2629;Name=YPSIP31758_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14360;old_locus_tag=YpsIP31758_2610 NC_009708.1 Protein Homology CDS 2964330 2966279 . - 0 ID=cds2552;Parent=gene2629;Dbxref=Genbank:WP_012105388.1;Name=WP_012105388.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_012105388.1;transl_table=11 NC_009708.1 RefSeq gene 2966279 2967391 . - . ID=gene2630;Name=YPSIP31758_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14365;old_locus_tag=YpsIP31758_2611 NC_009708.1 Protein Homology CDS 2966279 2967391 . - 0 ID=cds2553;Parent=gene2630;Dbxref=Genbank:WP_012105389.1;Name=WP_012105389.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_012105389.1;transl_table=11 NC_009708.1 RefSeq gene 2967624 2968571 . + . ID=gene2631;Name=YPSIP31758_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14370;old_locus_tag=YpsIP31758_2613 NC_009708.1 Protein Homology CDS 2967624 2968571 . + 0 ID=cds2554;Parent=gene2631;Dbxref=Genbank:WP_012105390.1;Name=WP_012105390.1;gbkey=CDS;product=virulence factor;protein_id=WP_012105390.1;transl_table=11 NC_009708.1 RefSeq gene 2968708 2970375 . - . ID=gene2632;Name=YPSIP31758_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14375;old_locus_tag=YpsIP31758_2614 NC_009708.1 Protein Homology CDS 2968708 2970375 . - 0 ID=cds2555;Parent=gene2632;Dbxref=Genbank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211356.1;transl_table=11 NC_009708.1 RefSeq gene 2970728 2971624 . + . ID=gene2633;Name=YPSIP31758_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14380;old_locus_tag=YpsIP31758_2616 NC_009708.1 Protein Homology CDS 2970728 2971624 . + 0 ID=cds2556;Parent=gene2633;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11 NC_009708.1 RefSeq gene 2971827 2973479 . + . ID=gene2634;Name=YPSIP31758_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14385;old_locus_tag=YpsIP31758_2617 NC_009708.1 Protein Homology CDS 2971827 2973479 . + 0 ID=cds2557;Parent=gene2634;Dbxref=Genbank:WP_002211359.1;Name=WP_002211359.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_002211359.1;transl_table=11 NC_009708.1 RefSeq gene 2973593 2974615 . + . ID=gene2635;Name=YPSIP31758_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14390;old_locus_tag=YpsIP31758_2618 NC_009708.1 Protein Homology CDS 2973593 2974615 . + 0 ID=cds2558;Parent=gene2635;Dbxref=Genbank:WP_002211360.1;Name=WP_002211360.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211360.1;transl_table=11 NC_009708.1 RefSeq gene 2974759 2976480 . + . ID=gene2636;Name=YPSIP31758_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14395;old_locus_tag=YpsIP31758_2619 NC_009708.1 Protein Homology CDS 2974759 2976480 . + 0 ID=cds2559;Parent=gene2636;Dbxref=Genbank:WP_002211361.1;Name=WP_002211361.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_002211361.1;transl_table=11 NC_009708.1 RefSeq repeat_region 2976679 2976852 . + . ID=id238;gbkey=repeat_region NC_009708.1 RefSeq gene 2976923 2977942 . + . ID=gene2637;Name=YPSIP31758_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14400;old_locus_tag=YpsIP31758_2620 NC_009708.1 Protein Homology CDS 2976923 2977942 . + 0 ID=cds2560;Parent=gene2637;Dbxref=Genbank:WP_012105391.1;Name=WP_012105391.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_012105391.1;transl_table=11 NC_009708.1 RefSeq gene 2977939 2979429 . + . ID=gene2638;Name=YPSIP31758_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14405;old_locus_tag=YpsIP31758_2621 NC_009708.1 Protein Homology CDS 2977939 2979429 . + 0 ID=cds2561;Parent=gene2638;Dbxref=Genbank:WP_011192045.1;Name=WP_011192045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192045.1;transl_table=11 NC_009708.1 RefSeq gene 2979529 2980536 . + . ID=gene2639;Name=YPSIP31758_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14410;old_locus_tag=YpsIP31758_2622 NC_009708.1 Protein Homology CDS 2979529 2980536 . + 0 ID=cds2562;Parent=gene2639;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11 NC_009708.1 RefSeq gene 2980633 2981208 . + . ID=gene2640;Name=YPSIP31758_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14415;old_locus_tag=YpsIP31758_2623 NC_009708.1 Protein Homology CDS 2980633 2981208 . + 0 ID=cds2563;Parent=gene2640;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NC_009708.1 RefSeq gene 2981378 2981938 . + . ID=gene2641;Name=YPSIP31758_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14420;old_locus_tag=YpsIP31758_2624 NC_009708.1 Protein Homology CDS 2981378 2981938 . + 0 ID=cds2564;Parent=gene2641;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NC_009708.1 RefSeq gene 2982233 2982961 . + . ID=gene2642;Name=YPSIP31758_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14425;old_locus_tag=YpsIP31758_2625 NC_009708.1 Protein Homology CDS 2982233 2982961 . + 0 ID=cds2565;Parent=gene2642;Dbxref=Genbank:WP_012105392.1;Name=WP_012105392.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_012105392.1;transl_table=11 NC_009708.1 RefSeq gene 2982982 2983713 . + . ID=gene2643;Name=YPSIP31758_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14430;old_locus_tag=YpsIP31758_2626 NC_009708.1 Protein Homology CDS 2982982 2983713 . + 0 ID=cds2566;Parent=gene2643;Dbxref=Genbank:WP_002211368.1;Name=WP_002211368.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NC_009708.1 RefSeq gene 2983725 2984441 . + . ID=gene2644;Name=YPSIP31758_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14435;old_locus_tag=YpsIP31758_2627 NC_009708.1 Protein Homology CDS 2983725 2984441 . + 0 ID=cds2567;Parent=gene2644;Dbxref=Genbank:WP_002211369.1;Name=WP_002211369.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_002211369.1;transl_table=11 NC_009708.1 RefSeq gene 2984441 2985109 . + . ID=gene2645;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14440;old_locus_tag=YpsIP31758_2628 NC_009708.1 Protein Homology CDS 2984441 2985109 . + 0 ID=cds2568;Parent=gene2645;Dbxref=Genbank:WP_002211370.1;Name=WP_002211370.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_002211370.1;transl_table=11 NC_009708.1 RefSeq gene 2985299 2986144 . - . ID=gene2646;Name=YPSIP31758_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14450;old_locus_tag=YpsIP31758_2630 NC_009708.1 Protein Homology CDS 2985299 2986144 . - 0 ID=cds2569;Parent=gene2646;Dbxref=Genbank:WP_002223483.1;Name=WP_002223483.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223483.1;transl_table=11 NC_009708.1 RefSeq gene 2986141 2987469 . - . ID=gene2647;Name=YPSIP31758_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14455;old_locus_tag=YpsIP31758_2631 NC_009708.1 Protein Homology CDS 2986141 2987469 . - 0 ID=cds2570;Parent=gene2647;Dbxref=Genbank:WP_012105393.1;Name=WP_012105393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105393.1;transl_table=11 NC_009708.1 RefSeq gene 2987462 2988259 . - . ID=gene2648;Name=YPSIP31758_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14460;old_locus_tag=YpsIP31758_2632 NC_009708.1 Protein Homology CDS 2987462 2988259 . - 0 ID=cds2571;Parent=gene2648;Dbxref=Genbank:WP_012105394.1;Name=WP_012105394.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_012105394.1;transl_table=11 NC_009708.1 RefSeq gene 2988247 2989032 . - . ID=gene2649;Name=YPSIP31758_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14465;old_locus_tag=YpsIP31758_2633 NC_009708.1 Protein Homology CDS 2988247 2989032 . - 0 ID=cds2572;Parent=gene2649;Dbxref=Genbank:WP_012105395.1;Name=WP_012105395.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_012105395.1;transl_table=11 NC_009708.1 RefSeq gene 2989029 2990087 . - . ID=gene2650;Name=YPSIP31758_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14470;old_locus_tag=YpsIP31758_2634 NC_009708.1 Protein Homology CDS 2989029 2990087 . - 0 ID=cds2573;Parent=gene2650;Dbxref=Genbank:WP_012105396.1;Name=WP_012105396.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_012105396.1;transl_table=11 NC_009708.1 RefSeq gene 2990087 2991178 . - . ID=gene2651;Name=YPSIP31758_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14475;old_locus_tag=YpsIP31758_2635 NC_009708.1 Protein Homology CDS 2990087 2991178 . - 0 ID=cds2574;Parent=gene2651;Dbxref=Genbank:WP_012105397.1;Name=WP_012105397.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012105397.1;transl_table=11 NC_009708.1 RefSeq gene 2991591 2992517 . - . ID=gene2652;Name=YPSIP31758_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14480;old_locus_tag=YpsIP31758_2636 NC_009708.1 Protein Homology CDS 2991591 2992517 . - 0 ID=cds2575;Parent=gene2652;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11 NC_009708.1 RefSeq gene 2993051 2993167 . - . ID=gene2653;Name=YPSIP31758_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14485;old_locus_tag=YpsIP31758_2638 NC_009708.1 Protein Homology CDS 2993051 2993167 . - 0 ID=cds2576;Parent=gene2653;Dbxref=Genbank:WP_012105399.1;Name=WP_012105399.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105399.1;transl_table=11 NC_009708.1 RefSeq gene 2993286 2994017 . + . ID=gene2654;Name=YPSIP31758_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14490;old_locus_tag=YpsIP31758_2639 NC_009708.1 Protein Homology CDS 2993286 2994017 . + 0 ID=cds2577;Parent=gene2654;Dbxref=Genbank:WP_002220045.1;Name=WP_002220045.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11 NC_009708.1 RefSeq gene 2994144 2995274 . - . ID=gene2655;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14495;old_locus_tag=YpsIP31758_2640 NC_009708.1 Protein Homology CDS 2994144 2995274 . - 0 ID=cds2578;Parent=gene2655;Dbxref=Genbank:WP_012105400.1;Name=WP_012105400.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_012105400.1;transl_table=11 NC_009708.1 RefSeq gene 2995358 2995822 . - . ID=gene2656;Name=YPSIP31758_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14500;old_locus_tag=YpsIP31758_2641 NC_009708.1 Protein Homology CDS 2995358 2995822 . - 0 ID=cds2579;Parent=gene2656;Dbxref=Genbank:WP_011192038.1;Name=WP_011192038.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192038.1;transl_table=11 NC_009708.1 RefSeq gene 2995947 2996792 . - . ID=gene2657;Name=YPSIP31758_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14505;old_locus_tag=YpsIP31758_2642 NC_009708.1 Protein Homology CDS 2995947 2996792 . - 0 ID=cds2580;Parent=gene2657;Dbxref=Genbank:WP_012105401.1;Name=WP_012105401.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_012105401.1;transl_table=11 NC_009708.1 RefSeq gene 2996789 2997754 . - . ID=gene2658;Name=YPSIP31758_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14510;old_locus_tag=YpsIP31758_2643 NC_009708.1 Protein Homology CDS 2996789 2997754 . - 0 ID=cds2581;Parent=gene2658;Dbxref=Genbank:WP_011192037.1;Name=WP_011192037.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_011192037.1;transl_table=11 NC_009708.1 RefSeq gene 2997779 2998912 . - . ID=gene2659;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14515;old_locus_tag=YpsIP31758_2644 NC_009708.1 Protein Homology CDS 2997779 2998912 . - 0 ID=cds2582;Parent=gene2659;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11 NC_009708.1 RefSeq gene 2999083 3000192 . - . ID=gene2660;Name=YPSIP31758_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14520;old_locus_tag=YpsIP31758_2645 NC_009708.1 Protein Homology CDS 2999083 3000192 . - 0 ID=cds2583;Parent=gene2660;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11 NC_009708.1 RefSeq gene 3000724 3001209 . - . ID=gene2661;Name=YPSIP31758_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14525;old_locus_tag=YpsIP31758_2646 NC_009708.1 Protein Homology CDS 3000724 3001209 . - 0 ID=cds2584;Parent=gene2661;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11 NC_009708.1 RefSeq gene 3001216 3001335 . - . ID=gene2662;Name=YPSIP31758_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14530 NC_009708.1 Protein Homology CDS 3001216 3001335 . - 0 ID=cds2585;Parent=gene2662;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11 NC_009708.1 RefSeq gene 3001351 3001665 . - . ID=gene2663;Name=YPSIP31758_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14535;old_locus_tag=YpsIP31758_2647 NC_009708.1 Protein Homology CDS 3001351 3001665 . - 0 ID=cds2586;Parent=gene2663;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11 NC_009708.1 RefSeq gene 3002128 3002391 . + . ID=gene2664;Name=YPSIP31758_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14540;old_locus_tag=YpsIP31758_2648 NC_009708.1 Protein Homology CDS 3002128 3002391 . + 0 ID=cds2587;Parent=gene2664;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NC_009708.1 RefSeq gene 3002801 3004489 . + . ID=gene2665;Name=YPSIP31758_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14545;old_locus_tag=YpsIP31758_2649 NC_009708.1 Protein Homology CDS 3002801 3004489 . + 0 ID=cds2588;Parent=gene2665;Dbxref=Genbank:WP_002208766.1;Name=WP_002208766.1;gbkey=CDS;product=transporter;protein_id=WP_002208766.1;transl_table=11 NC_009708.1 RefSeq gene 3004582 3004662 . + . ID=gene2666;Name=rybB;gbkey=Gene;gene=rybB;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22475 NC_009708.1 RefSeq transcript 3004582 3004662 . + . ID=rna72;Parent=gene2666;gbkey=misc_RNA;gene=rybB;product=rybB RNA NC_009708.1 RefSeq exon 3004582 3004662 . + . ID=id239;Parent=rna72;gbkey=misc_RNA;gene=rybB;product=rybB RNA NC_009708.1 RefSeq gene 3004966 3005637 . + . ID=gene2667;Name=YPSIP31758_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14550;old_locus_tag=YpsIP31758_2650 NC_009708.1 Protein Homology CDS 3004966 3005637 . + 0 ID=cds2589;Parent=gene2667;Dbxref=Genbank:WP_041175878.1;Name=WP_041175878.1;gbkey=CDS;product=phosphoesterase;protein_id=WP_041175878.1;transl_table=11 NC_009708.1 RefSeq gene 3005637 3006242 . + . ID=gene2668;Name=YPSIP31758_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14555;old_locus_tag=YpsIP31758_2651 NC_009708.1 Protein Homology CDS 3005637 3006242 . + 0 ID=cds2590;Parent=gene2668;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11 NC_009708.1 RefSeq gene 3006500 3007171 . + . ID=gene2669;Name=YPSIP31758_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14560;old_locus_tag=YpsIP31758_2652 NC_009708.1 Protein Homology CDS 3006500 3007171 . + 0 ID=cds2591;Parent=gene2669;Dbxref=Genbank:WP_012105403.1;Name=WP_012105403.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_012105403.1;transl_table=11 NC_009708.1 RefSeq gene 3007401 3008165 . + . ID=gene2670;Name=YPSIP31758_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14565;old_locus_tag=YpsIP31758_2653 NC_009708.1 Protein Homology CDS 3007401 3008165 . + 0 ID=cds2592;Parent=gene2670;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11 NC_009708.1 RefSeq gene 3009265 3010566 . + . ID=gene2671;Name=YPSIP31758_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14570;old_locus_tag=YpsIP31758_2656 NC_009708.1 Protein Homology CDS 3009265 3010566 . + 0 ID=cds2593;Parent=gene2671;Dbxref=Genbank:WP_011192035.1;Name=WP_011192035.1;gbkey=CDS;product=serine/threonine transporter;protein_id=WP_011192035.1;transl_table=11 NC_009708.1 RefSeq gene 3010579 3010731 . - . ID=gene2672;Name=YPSIP31758_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14575;old_locus_tag=YpsIP31758_2657 NC_009708.1 Protein Homology CDS 3010579 3010731 . - 0 ID=cds2594;Parent=gene2672;Dbxref=Genbank:WP_042659468.1;Name=WP_042659468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042659468.1;transl_table=11 NC_009708.1 RefSeq gene 3011023 3012225 . - . ID=gene2673;Name=YPSIP31758_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14580;old_locus_tag=YpsIP31758_2659 NC_009708.1 Protein Homology CDS 3011023 3012225 . - 0 ID=cds2595;Parent=gene2673;Dbxref=Genbank:WP_012105405.1;Name=WP_012105405.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_012105405.1;transl_table=11 NC_009708.1 RefSeq gene 3012560 3013231 . - . ID=gene2674;Name=YPSIP31758_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14585;old_locus_tag=YpsIP31758_2660 NC_009708.1 Protein Homology CDS 3012560 3013231 . - 0 ID=cds2596;Parent=gene2674;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NC_009708.1 RefSeq gene 3013228 3014214 . - . ID=gene2675;Name=YPSIP31758_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14590;old_locus_tag=YpsIP31758_2661 NC_009708.1 Protein Homology CDS 3013228 3014214 . - 0 ID=cds2597;Parent=gene2675;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NC_009708.1 RefSeq gene 3014211 3015035 . - . ID=gene2676;Name=YPSIP31758_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14595;old_locus_tag=YpsIP31758_2662 NC_009708.1 Protein Homology CDS 3014211 3015035 . - 0 ID=cds2598;Parent=gene2676;Dbxref=Genbank:WP_011192034.1;Name=WP_011192034.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_011192034.1;transl_table=11 NC_009708.1 RefSeq gene 3015263 3016330 . - . ID=gene2677;Name=YPSIP31758_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14600;old_locus_tag=YpsIP31758_2663 NC_009708.1 Protein Homology CDS 3015263 3016330 . - 0 ID=cds2599;Parent=gene2677;Dbxref=Genbank:WP_012105406.1;Name=WP_012105406.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_012105406.1;transl_table=11 NC_009708.1 RefSeq gene 3016817 3017479 . + . ID=gene2678;Name=YPSIP31758_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14605;old_locus_tag=YpsIP31758_2664 NC_009708.1 Protein Homology CDS 3016817 3017479 . + 0 ID=cds2600;Parent=gene2678;Dbxref=Genbank:WP_011192032.1;Name=WP_011192032.1;gbkey=CDS;product=hydrolase;protein_id=WP_011192032.1;transl_table=11 NC_009708.1 RefSeq gene 3017684 3018304 . + . ID=gene2679;Name=YPSIP31758_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14610;old_locus_tag=YpsIP31758_2665 NC_009708.1 Protein Homology CDS 3017684 3018304 . + 0 ID=cds2601;Parent=gene2679;Dbxref=Genbank:WP_011192031.1;Name=WP_011192031.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_011192031.1;transl_table=11 NC_009708.1 RefSeq gene 3018575 3020572 . - . ID=gene2680;Name=YPSIP31758_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14615;old_locus_tag=YpsIP31758_2666 NC_009708.1 Protein Homology CDS 3018575 3020572 . - 0 ID=cds2602;Parent=gene2680;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NC_009708.1 RefSeq gene 3020832 3021620 . - . ID=gene2681;Name=YPSIP31758_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14620;old_locus_tag=YpsIP31758_2667 NC_009708.1 Protein Homology CDS 3020832 3021620 . - 0 ID=cds2603;Parent=gene2681;Dbxref=Genbank:WP_011192030.1;Name=WP_011192030.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_011192030.1;transl_table=11 NC_009708.1 RefSeq gene 3021617 3022699 . - . ID=gene2682;Name=YPSIP31758_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14625;old_locus_tag=YpsIP31758_2668 NC_009708.1 Protein Homology CDS 3021617 3022699 . - 0 ID=cds2604;Parent=gene2682;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NC_009708.1 RefSeq gene 3022894 3024039 . - . ID=gene2683;Name=YPSIP31758_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14630;old_locus_tag=YpsIP31758_2669 NC_009708.1 Protein Homology CDS 3022894 3024039 . - 0 ID=cds2605;Parent=gene2683;Dbxref=Genbank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208785.1;transl_table=11 NC_009708.1 RefSeq gene 3024325 3025836 . - . ID=gene2684;Name=YPSIP31758_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14635;old_locus_tag=YpsIP31758_2670 NC_009708.1 Protein Homology CDS 3024325 3025836 . - 0 ID=cds2606;Parent=gene2684;Dbxref=Genbank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;product=lysine transporter;protein_id=WP_002208786.1;transl_table=11 NC_009708.1 RefSeq gene 3026094 3026966 . - . ID=gene2685;Name=YPSIP31758_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14640;old_locus_tag=YpsIP31758_2672 NC_009708.1 Protein Homology CDS 3026094 3026966 . - 0 ID=cds2607;Parent=gene2685;Dbxref=Genbank:WP_002208788.1;Name=WP_002208788.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208788.1;transl_table=11 NC_009708.1 RefSeq gene 3027624 3028712 . + . ID=gene2686;Name=YPSIP31758_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14645;old_locus_tag=YpsIP31758_2674 NC_009708.1 Protein Homology CDS 3027624 3028712 . + 0 ID=cds2608;Parent=gene2686;Dbxref=Genbank:WP_002208790.1;Name=WP_002208790.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208790.1;transl_table=11 NC_009708.1 RefSeq gene 3028876 3029733 . + . ID=gene2687;Name=YPSIP31758_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14650;old_locus_tag=YpsIP31758_2675 NC_009708.1 Protein Homology CDS 3028876 3029733 . + 0 ID=cds2609;Parent=gene2687;Dbxref=Genbank:WP_012105407.1;Name=WP_012105407.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_012105407.1;transl_table=11 NC_009708.1 RefSeq gene 3029820 3032291 . - . ID=gene2688;Name=YPSIP31758_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14655;old_locus_tag=YpsIP31758_2676 NC_009708.1 Protein Homology CDS 3029820 3032291 . - 0 ID=cds2610;Parent=gene2688;Dbxref=Genbank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;product=usher protein;protein_id=WP_002208792.1;transl_table=11 NC_009708.1 RefSeq gene 3032375 3033196 . - . ID=gene2689;Name=YPSIP31758_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14660;old_locus_tag=YpsIP31758_2677 NC_009708.1 Protein Homology CDS 3032375 3033196 . - 0 ID=cds2611;Parent=gene2689;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NC_009708.1 RefSeq gene 3033323 3033799 . - . ID=gene2690;Name=YPSIP31758_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14665;old_locus_tag=YpsIP31758_2678 NC_009708.1 Protein Homology CDS 3033323 3033799 . - 0 ID=cds2612;Parent=gene2690;Dbxref=Genbank:WP_012105408.1;Name=WP_012105408.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_012105408.1;transl_table=11 NC_009708.1 RefSeq gene 3034344 3034832 . - . ID=gene2691;Name=YPSIP31758_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14670;old_locus_tag=YpsIP31758_2679 NC_009708.1 Protein Homology CDS 3034344 3034832 . - 0 ID=cds2613;Parent=gene2691;Dbxref=Genbank:WP_012105409.1;Name=WP_012105409.1;gbkey=CDS;product=protein PsaF;protein_id=WP_012105409.1;transl_table=11 NC_009708.1 RefSeq gene 3034829 3035473 . - . ID=gene2692;Name=YPSIP31758_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14675;old_locus_tag=YpsIP31758_2680 NC_009708.1 Protein Homology CDS 3034829 3035473 . - 0 ID=cds2614;Parent=gene2692;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11 NC_009708.1 RefSeq gene 3035798 3037498 . - . ID=gene2693;Name=YPSIP31758_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14680;old_locus_tag=YpsIP31758_2681 NC_009708.1 Protein Homology CDS 3035798 3037498 . - 0 ID=cds2615;Parent=gene2693;Dbxref=Genbank:WP_012105410.1;Name=WP_012105410.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_012105410.1;transl_table=11 NC_009708.1 RefSeq gene 3037513 3038451 . - . ID=gene2694;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14685;old_locus_tag=YpsIP31758_2682 NC_009708.1 Protein Homology CDS 3037513 3038451 . - 0 ID=cds2616;Parent=gene2694;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NC_009708.1 RefSeq gene 3038448 3039581 . - . ID=gene2695;Name=YPSIP31758_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14690;old_locus_tag=YpsIP31758_2683 NC_009708.1 Protein Homology CDS 3038448 3039581 . - 0 ID=cds2617;Parent=gene2695;Dbxref=Genbank:WP_012105411.1;Name=WP_012105411.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_012105411.1;transl_table=11 NC_009708.1 RefSeq gene 3039843 3040298 . + . ID=gene2696;Name=YPSIP31758_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14695;old_locus_tag=YpsIP31758_2686 NC_009708.1 Protein Homology CDS 3039843 3040298 . + 0 ID=cds2618;Parent=gene2696;Dbxref=Genbank:WP_012105412.1;Name=WP_012105412.1;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=WP_012105412.1;transl_table=11 NC_009708.1 RefSeq gene 3040391 3041389 . - . ID=gene2697;Name=YPSIP31758_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14700;old_locus_tag=YpsIP31758_2687 NC_009708.1 Protein Homology CDS 3040391 3041389 . - 0 ID=cds2619;Parent=gene2697;Dbxref=Genbank:WP_012105413.1;Name=WP_012105413.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012105413.1;transl_table=11 NC_009708.1 RefSeq gene 3041425 3042939 . - . ID=gene2698;Name=YPSIP31758_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14705;old_locus_tag=YpsIP31758_2688 NC_009708.1 Protein Homology CDS 3041425 3042939 . - 0 ID=cds2620;Parent=gene2698;Dbxref=Genbank:WP_042659819.1;Name=WP_042659819.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_042659819.1;transl_table=11 NC_009708.1 RefSeq gene 3043108 3044196 . - . ID=gene2699;Name=YPSIP31758_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14710;old_locus_tag=YpsIP31758_2689 NC_009708.1 Protein Homology CDS 3043108 3044196 . - 0 ID=cds2621;Parent=gene2699;Dbxref=Genbank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11 NC_009708.1 RefSeq gene 3044312 3045022 . - . ID=gene2700;Name=YPSIP31758_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14715;old_locus_tag=YpsIP31758_2690 NC_009708.1 Protein Homology CDS 3044312 3045022 . - 0 ID=cds2622;Parent=gene2700;Dbxref=Genbank:WP_012105415.1;Name=WP_012105415.1;gbkey=CDS;product=ribose-5-phosphate isomerase A 2;protein_id=WP_012105415.1;transl_table=11 NC_009708.1 RefSeq gene 3045042 3046595 . - . ID=gene2701;Name=YPSIP31758_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14720;old_locus_tag=YpsIP31758_2691 NC_009708.1 Protein Homology CDS 3045042 3046595 . - 0 ID=cds2623;Parent=gene2701;Dbxref=Genbank:WP_012105416.1;Name=WP_012105416.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_012105416.1;transl_table=11 NC_009708.1 RefSeq gene 3046599 3048095 . - . ID=gene2702;Name=YPSIP31758_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14725;old_locus_tag=YpsIP31758_2692 NC_009708.1 Protein Homology CDS 3046599 3048095 . - 0 ID=cds2624;Parent=gene2702;Dbxref=Genbank:WP_011192024.1;Name=WP_011192024.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_011192024.1;transl_table=11 NC_009708.1 RefSeq gene 3048459 3049601 . + . ID=gene2703;Name=YPSIP31758_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14730;old_locus_tag=YpsIP31758_2693 NC_009708.1 Protein Homology CDS 3048459 3049601 . + 0 ID=cds2625;Parent=gene2703;Dbxref=Genbank:WP_012105417.1;Name=WP_012105417.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_012105417.1;transl_table=11 NC_009708.1 RefSeq gene 3049613 3050563 . + . ID=gene2704;Name=YPSIP31758_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14735;old_locus_tag=YpsIP31758_2694 NC_009708.1 Protein Homology CDS 3049613 3050563 . + 0 ID=cds2626;Parent=gene2704;Dbxref=Genbank:WP_012105418.1;Name=WP_012105418.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_012105418.1;transl_table=11 NC_009708.1 RefSeq gene 3050574 3051407 . + . ID=gene2705;Name=YPSIP31758_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14740;old_locus_tag=YpsIP31758_2695 NC_009708.1 Protein Homology CDS 3050574 3051407 . + 0 ID=cds2627;Parent=gene2705;Dbxref=Genbank:WP_012105419.1;Name=WP_012105419.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_012105419.1;transl_table=11 NC_009708.1 RefSeq gene 3051476 3051730 . - . ID=gene2706;Name=YPSIP31758_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14745;old_locus_tag=YpsIP31758_2696 NC_009708.1 Protein Homology CDS 3051476 3051730 . - 0 ID=cds2628;Parent=gene2706;Dbxref=Genbank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208811.1;transl_table=11 NC_009708.1 RefSeq gene 3052142 3053386 . + . ID=gene2707;Name=YPSIP31758_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14750;old_locus_tag=YpsIP31758_2697 NC_009708.1 Protein Homology CDS 3052142 3053386 . + 0 ID=cds2629;Parent=gene2707;Dbxref=Genbank:WP_012105421.1;Name=WP_012105421.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_012105421.1;transl_table=11 NC_009708.1 RefSeq gene 3053490 3054062 . + . ID=gene2708;Name=YPSIP31758_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14755;old_locus_tag=YpsIP31758_2698 NC_009708.1 Protein Homology CDS 3053490 3054062 . + 0 ID=cds2630;Parent=gene2708;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11 NC_009708.1 RefSeq gene 3054204 3055397 . - . ID=gene2709;Name=YPSIP31758_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14760;old_locus_tag=YpsIP31758_2699 NC_009708.1 Protein Homology CDS 3054204 3055397 . - 0 ID=cds2631;Parent=gene2709;Dbxref=Genbank:WP_011192020.1;Name=WP_011192020.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_011192020.1;transl_table=11 NC_009708.1 RefSeq gene 3056001 3057473 . + . ID=gene2710;Name=YPSIP31758_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14765;old_locus_tag=YpsIP31758_2702 NC_009708.1 Protein Homology CDS 3056001 3057473 . + 0 ID=cds2632;Parent=gene2710;Dbxref=Genbank:WP_002224659.1;Name=WP_002224659.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_002224659.1;transl_table=11 NC_009708.1 RefSeq gene 3057632 3058375 . - . ID=gene2711;Name=YPSIP31758_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14770;old_locus_tag=YpsIP31758_2703 NC_009708.1 Protein Homology CDS 3057632 3058375 . - 0 ID=cds2633;Parent=gene2711;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NC_009708.1 RefSeq gene 3058746 3058859 . + . ID=gene2712;Name=YPSIP31758_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14775;old_locus_tag=YpsIP31758_2704 NC_009708.1 Protein Homology CDS 3058746 3058859 . + 0 ID=cds2634;Parent=gene2712;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11 NC_009708.1 RefSeq gene 3059183 3060166 . + . ID=gene2713;Name=YPSIP31758_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14780;old_locus_tag=YpsIP31758_2705 NC_009708.1 Protein Homology CDS 3059183 3060166 . + 0 ID=cds2635;Parent=gene2713;Dbxref=Genbank:WP_011192019.1;Name=WP_011192019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192019.1;transl_table=11 NC_009708.1 RefSeq gene 3060225 3060926 . + . ID=gene2714;Name=YPSIP31758_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14785;old_locus_tag=YpsIP31758_2706 NC_009708.1 Protein Homology CDS 3060225 3060926 . + 0 ID=cds2636;Parent=gene2714;Dbxref=Genbank:WP_012105423.1;Name=WP_012105423.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105423.1;transl_table=11 NC_009708.1 RefSeq gene 3061368 3061952 . + . ID=gene2715;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=YPSIP31758_RS14790;old_locus_tag=YpsIP31758_2707 NC_009708.1 Protein Homology CDS 3061368 3061952 . + 0 ID=cds2637;Parent=gene2715;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11 NC_009708.1 RefSeq gene 3062646 3064118 . + . ID=gene2716;Name=YPSIP31758_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14795;old_locus_tag=YpsIP31758_2710 NC_009708.1 Protein Homology CDS 3062646 3064118 . + 0 ID=cds2638;Parent=gene2716;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11 NC_009708.1 RefSeq gene 3064200 3066008 . + . ID=gene2717;Name=YPSIP31758_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14800;old_locus_tag=YpsIP31758_2711 NC_009708.1 Protein Homology CDS 3064200 3066008 . + 0 ID=cds2639;Parent=gene2717;Dbxref=Genbank:WP_012105425.1;Name=WP_012105425.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_012105425.1;transl_table=11 NC_009708.1 RefSeq gene 3066018 3067118 . + . ID=gene2718;Name=YPSIP31758_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14805;old_locus_tag=YpsIP31758_2712 NC_009708.1 Protein Homology CDS 3066018 3067118 . + 0 ID=cds2640;Parent=gene2718;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NC_009708.1 RefSeq gene 3067121 3068146 . + . ID=gene2719;Name=YPSIP31758_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14810;old_locus_tag=YpsIP31758_2713 NC_009708.1 Protein Homology CDS 3067121 3068146 . + 0 ID=cds2641;Parent=gene2719;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NC_009708.1 RefSeq gene 3068148 3069740 . + . ID=gene2720;Name=YPSIP31758_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14815;old_locus_tag=YpsIP31758_2714 NC_009708.1 Protein Homology CDS 3068148 3069740 . + 0 ID=cds2642;Parent=gene2720;Dbxref=Genbank:WP_012105426.1;Name=WP_012105426.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_012105426.1;transl_table=11 NC_009708.1 RefSeq gene 3069801 3070145 . - . ID=gene2721;Name=YPSIP31758_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14820;old_locus_tag=YpsIP31758_2715 NC_009708.1 Protein Homology CDS 3069801 3070145 . - 0 ID=cds2643;Parent=gene2721;Dbxref=Genbank:WP_011192014.1;Name=WP_011192014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192014.1;transl_table=11 NC_009708.1 RefSeq gene 3071130 3072329 . - . ID=gene2722;Name=YPSIP31758_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14825;old_locus_tag=YpsIP31758_2717 NC_009708.1 Protein Homology CDS 3071130 3072329 . - 0 ID=cds2644;Parent=gene2722;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11 NC_009708.1 RefSeq gene 3072433 3073140 . - . ID=gene2723;Name=YPSIP31758_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14830;old_locus_tag=YpsIP31758_2718 NC_009708.1 Protein Homology CDS 3072433 3073140 . - 0 ID=cds2645;Parent=gene2723;Dbxref=Genbank:WP_012105427.1;Name=WP_012105427.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=16S rRNA pseudouridylate synthase;protein_id=WP_012105427.1;transl_table=11 NC_009708.1 RefSeq gene 3073674 3075431 . + . ID=gene2724;Name=YPSIP31758_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14835;old_locus_tag=YpsIP31758_2719 NC_009708.1 Protein Homology CDS 3073674 3075431 . + 0 ID=cds2646;Parent=gene2724;Dbxref=Genbank:WP_012105428.1;Name=WP_012105428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105428.1;transl_table=11 NC_009708.1 RefSeq gene 3075593 3075877 . + . ID=gene2725;Name=YPSIP31758_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14840;old_locus_tag=YpsIP31758_2720 NC_009708.1 Protein Homology CDS 3075593 3075877 . + 0 ID=cds2647;Parent=gene2725;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NC_009708.1 RefSeq gene 3075965 3076969 . - . ID=gene2726;Name=YPSIP31758_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14845;old_locus_tag=YpsIP31758_2721 NC_009708.1 Protein Homology CDS 3075965 3076969 . - 0 ID=cds2648;Parent=gene2726;Dbxref=Genbank:WP_002208835.1;Name=WP_002208835.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_002208835.1;transl_table=11 NC_009708.1 RefSeq gene 3077147 3077374 . + . ID=gene2727;Name=YPSIP31758_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14850;old_locus_tag=YpsIP31758_2722 NC_009708.1 Protein Homology CDS 3077147 3077374 . + 0 ID=cds2649;Parent=gene2727;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11 NC_009708.1 RefSeq gene 3077402 3079198 . + . ID=gene2728;Name=YPSIP31758_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14855;old_locus_tag=YpsIP31758_2723 NC_009708.1 Protein Homology CDS 3077402 3079198 . + 0 ID=cds2650;Parent=gene2728;Dbxref=Genbank:WP_002208837.1;Name=WP_002208837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208837.1;transl_table=11 NC_009708.1 RefSeq gene 3079303 3079379 . + . ID=gene2729;Name=YPSIP31758_RS14860;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS14860;old_locus_tag=YpsIP31758_4243 NC_009708.1 tRNAscan-SE tRNA 3079303 3079379 . + . ID=rna73;Parent=gene2729;anticodon=(pos:3079337..3079339);gbkey=tRNA;product=tRNA-Pro NC_009708.1 tRNAscan-SE exon 3079303 3079379 . + . ID=id240;Parent=rna73;anticodon=(pos:3079337..3079339);gbkey=tRNA;product=tRNA-Pro NC_009708.1 RefSeq repeat_region 3079938 3080804 . + . ID=id241;gbkey=repeat_region NC_009708.1 RefSeq gene 3080169 3081317 . + . ID=gene2730;Name=YPSIP31758_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14870;old_locus_tag=YpsIP31758_2725 NC_009708.1 Protein Homology CDS 3080169 3081317 . + 0 ID=cds2651;Parent=gene2730;Dbxref=Genbank:WP_002208839.1;Name=WP_002208839.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002208839.1;transl_table=11 NC_009708.1 RefSeq gene 3081330 3081818 . + . ID=gene2731;Name=YPSIP31758_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14875;old_locus_tag=YpsIP31758_2726 NC_009708.1 Protein Homology CDS 3081330 3081818 . + 0 ID=cds2652;Parent=gene2731;Dbxref=Genbank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208840.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3082000 3082197 . + . ID=id242;gbkey=repeat_region NC_009708.1 RefSeq gene 3082518 3082880 . + . ID=gene2732;Name=YPSIP31758_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14885;old_locus_tag=YpsIP31758_2728 NC_009708.1 Protein Homology CDS 3082518 3082880 . + 0 ID=cds2653;Parent=gene2732;Dbxref=Genbank:WP_012105431.1;Name=WP_012105431.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105431.1;transl_table=11 NC_009708.1 RefSeq gene 3083006 3084442 . - . ID=gene2733;Name=YPSIP31758_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14890;old_locus_tag=YpsIP31758_2729 NC_009708.1 Protein Homology CDS 3083006 3084442 . - 0 ID=cds2654;Parent=gene2733;Dbxref=Genbank:WP_012105432.1;Name=WP_012105432.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_012105432.1;transl_table=11 NC_009708.1 RefSeq gene 3084733 3085473 . - . ID=gene2734;Name=YPSIP31758_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14895;old_locus_tag=YpsIP31758_2730 NC_009708.1 Protein Homology CDS 3084733 3085473 . - 0 ID=cds2655;Parent=gene2734;Dbxref=Genbank:WP_012105433.1;Name=WP_012105433.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105433.1;transl_table=11 NC_009708.1 RefSeq gene 3085771 3086550 . - . ID=gene2735;Name=YPSIP31758_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14900;old_locus_tag=YpsIP31758_2731 NC_009708.1 Protein Homology CDS 3085771 3086550 . - 0 ID=cds2656;Parent=gene2735;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11 NC_009708.1 RefSeq gene 3086647 3086994 . - . ID=gene2736;Name=YPSIP31758_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14905 NC_009708.1 Protein Homology CDS 3086647 3086994 . - 0 ID=cds2657;Parent=gene2736;Dbxref=Genbank:WP_041175879.1;Name=WP_041175879.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175879.1;transl_table=11 NC_009708.1 RefSeq gene 3086991 3087249 . - . ID=gene2737;Name=YPSIP31758_RS14910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS14910;pseudo=true NC_009708.1 Protein Homology CDS 3086991 3087249 . - 0 ID=cds2658;Parent=gene2737;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3087246 3088382 . - . ID=gene2738;Name=YPSIP31758_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14915;old_locus_tag=YpsIP31758_2733 NC_009708.1 Protein Homology CDS 3087246 3088382 . - 0 ID=cds2659;Parent=gene2738;Dbxref=Genbank:WP_011192005.1;Name=WP_011192005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192005.1;transl_table=11 NC_009708.1 RefSeq gene 3088386 3088841 . - . ID=gene2739;Name=YPSIP31758_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14920;old_locus_tag=YpsIP31758_2734 NC_009708.1 Protein Homology CDS 3088386 3088841 . - 0 ID=cds2660;Parent=gene2739;Dbxref=Genbank:WP_012105435.1;Name=WP_012105435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105435.1;transl_table=11 NC_009708.1 RefSeq gene 3088838 3089434 . - . ID=gene2740;Name=YPSIP31758_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14925;old_locus_tag=YpsIP31758_2735 NC_009708.1 Protein Homology CDS 3088838 3089434 . - 0 ID=cds2661;Parent=gene2740;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11 NC_009708.1 RefSeq gene 3089450 3090505 . - . ID=gene2741;Name=YPSIP31758_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14930;old_locus_tag=YpsIP31758_2736 NC_009708.1 Protein Homology CDS 3089450 3090505 . - 0 ID=cds2662;Parent=gene2741;Dbxref=Genbank:WP_012105436.1;Name=WP_012105436.1;gbkey=CDS;product=tail protein;protein_id=WP_012105436.1;transl_table=11 NC_009708.1 RefSeq gene 3090502 3091908 . - . ID=gene2742;Name=YPSIP31758_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14935;old_locus_tag=YpsIP31758_2737 NC_009708.1 Protein Homology CDS 3090502 3091908 . - 0 ID=cds2663;Parent=gene2742;Dbxref=Genbank:WP_012105437.1;Name=WP_012105437.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105437.1;transl_table=11 NC_009708.1 RefSeq gene 3092190 3093683 . - . ID=gene2743;Name=YPSIP31758_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14940;old_locus_tag=YpsIP31758_2738 NC_009708.1 Protein Homology CDS 3092190 3093683 . - 0 ID=cds2664;Parent=gene2743;Dbxref=Genbank:WP_012105438.1;Name=WP_012105438.1;gbkey=CDS;product=coat protein;protein_id=WP_012105438.1;transl_table=11 NC_009708.1 RefSeq gene 3093804 3094103 . - . ID=gene2744;Name=YPSIP31758_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14945;old_locus_tag=YpsIP31758_2739 NC_009708.1 Protein Homology CDS 3093804 3094103 . - 0 ID=cds2665;Parent=gene2744;Dbxref=Genbank:WP_012105439.1;Name=WP_012105439.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105439.1;transl_table=11 NC_009708.1 RefSeq gene 3094105 3094473 . - . ID=gene2745;Name=YPSIP31758_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14950;old_locus_tag=YpsIP31758_2740 NC_009708.1 Protein Homology CDS 3094105 3094473 . - 0 ID=cds2666;Parent=gene2745;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11 NC_009708.1 RefSeq gene 3094495 3096003 . - . ID=gene2746;Name=YPSIP31758_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14955;old_locus_tag=YpsIP31758_2741 NC_009708.1 Protein Homology CDS 3094495 3096003 . - 0 ID=cds2667;Parent=gene2746;Dbxref=Genbank:WP_012105440.1;Name=WP_012105440.1;gbkey=CDS;product=tail protein;protein_id=WP_012105440.1;transl_table=11 NC_009708.1 RefSeq gene 3096000 3096194 . - . ID=gene2747;Name=YPSIP31758_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14960;old_locus_tag=YpsIP31758_2742 NC_009708.1 Protein Homology CDS 3096000 3096194 . - 0 ID=cds2668;Parent=gene2747;Dbxref=Genbank:WP_012105441.1;Name=WP_012105441.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105441.1;transl_table=11 NC_009708.1 RefSeq gene 3096199 3096768 . - . ID=gene2748;Name=YPSIP31758_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14965;old_locus_tag=YpsIP31758_2743 NC_009708.1 Protein Homology CDS 3096199 3096768 . - 0 ID=cds2669;Parent=gene2748;Dbxref=Genbank:WP_002363609.1;Name=WP_002363609.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002363609.1;transl_table=11 NC_009708.1 RefSeq gene 3096862 3097152 . - . ID=gene2749;Name=YPSIP31758_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14970;old_locus_tag=YpsIP31758_2744 NC_009708.1 Protein Homology CDS 3096862 3097152 . - 0 ID=cds2670;Parent=gene2749;Dbxref=Genbank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NC_009708.1 RefSeq gene 3097410 3098204 . - . ID=gene2750;Name=YPSIP31758_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14975;old_locus_tag=YpsIP31758_2745 NC_009708.1 Protein Homology CDS 3097410 3098204 . - 0 ID=cds2671;Parent=gene2750;Dbxref=Genbank:WP_002208860.1;Name=WP_002208860.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002208860.1;transl_table=11 NC_009708.1 RefSeq gene 3098180 3098989 . - . ID=gene2751;Name=YPSIP31758_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14980;old_locus_tag=YpsIP31758_2746 NC_009708.1 Protein Homology CDS 3098180 3098989 . - 0 ID=cds2672;Parent=gene2751;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11 NC_009708.1 RefSeq gene 3098995 3099666 . - . ID=gene2752;Name=YPSIP31758_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14985;old_locus_tag=YpsIP31758_2747 NC_009708.1 Protein Homology CDS 3098995 3099666 . - 0 ID=cds2673;Parent=gene2752;Dbxref=Genbank:WP_032466639.1;Name=WP_032466639.1;gbkey=CDS;product=aldolase;protein_id=WP_032466639.1;transl_table=11 NC_009708.1 RefSeq gene 3099723 3101027 . - . ID=gene2753;Name=YPSIP31758_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14990;old_locus_tag=YpsIP31758_2748 NC_009708.1 Protein Homology CDS 3099723 3101027 . - 0 ID=cds2674;Parent=gene2753;Dbxref=Genbank:WP_012105443.1;Name=WP_012105443.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_012105443.1;transl_table=11 NC_009708.1 RefSeq gene 3101238 3101717 . - . ID=gene2754;Name=YPSIP31758_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS14995;old_locus_tag=YpsIP31758_2749 NC_009708.1 Protein Homology CDS 3101238 3101717 . - 0 ID=cds2675;Parent=gene2754;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11 NC_009708.1 RefSeq gene 3101991 3102713 . + . ID=gene2755;Name=YPSIP31758_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15000;old_locus_tag=YpsIP31758_2750 NC_009708.1 Protein Homology CDS 3101991 3102713 . + 0 ID=cds2676;Parent=gene2755;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11 NC_009708.1 RefSeq gene 3102919 3103161 . + . ID=gene2756;Name=YPSIP31758_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15005;old_locus_tag=YpsIP31758_2751 NC_009708.1 Protein Homology CDS 3102919 3103161 . + 0 ID=cds2677;Parent=gene2756;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11 NC_009708.1 RefSeq gene 3103322 3104261 . + . ID=gene2757;Name=YPSIP31758_RS15010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS15010;pseudo=true NC_009708.1 Protein Homology CDS 3103322 3104261 . + 0 ID=cds2678;Parent=gene2757;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protease;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3104683 3106470 . + . ID=gene2758;Name=YPSIP31758_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15015;old_locus_tag=YpsIP31758_2753 NC_009708.1 Protein Homology CDS 3104683 3106470 . + 0 ID=cds2679;Parent=gene2758;Dbxref=Genbank:WP_012105444.1;Name=WP_012105444.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_012105444.1;transl_table=11 NC_009708.1 RefSeq gene 3106544 3107533 . - . ID=gene2759;Name=YPSIP31758_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15020;old_locus_tag=YpsIP31758_2754 NC_009708.1 Protein Homology CDS 3106544 3107533 . - 0 ID=cds2680;Parent=gene2759;Dbxref=Genbank:WP_011906349.1;Name=WP_011906349.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_011906349.1;transl_table=11 NC_009708.1 RefSeq gene 3107949 3109475 . + . ID=gene2760;Name=YPSIP31758_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15025;old_locus_tag=YpsIP31758_2756 NC_009708.1 Protein Homology CDS 3107949 3109475 . + 0 ID=cds2681;Parent=gene2760;Dbxref=Genbank:WP_011191998.1;Name=WP_011191998.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011191998.1;transl_table=11 NC_009708.1 RefSeq gene 3109462 3109632 . - . ID=gene2761;Name=YPSIP31758_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15030;old_locus_tag=YpsIP31758_2755 NC_009708.1 Protein Homology CDS 3109462 3109632 . - 0 ID=cds2682;Parent=gene2761;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11 NC_009708.1 RefSeq gene 3109750 3110916 . + . ID=gene2762;Name=YPSIP31758_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15035;old_locus_tag=YpsIP31758_2758 NC_009708.1 Protein Homology CDS 3109750 3110916 . + 0 ID=cds2683;Parent=gene2762;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11 NC_009708.1 RefSeq gene 3111104 3111179 . - . ID=gene2763;Name=YPSIP31758_RS15040;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15040;old_locus_tag=YpsIP31758_4244 NC_009708.1 tRNAscan-SE tRNA 3111104 3111179 . - . ID=rna74;Parent=gene2763;anticodon=(pos:complement(3111144..3111146));gbkey=tRNA;product=tRNA-Thr NC_009708.1 tRNAscan-SE exon 3111104 3111179 . - . ID=id243;Parent=rna74;anticodon=(pos:complement(3111144..3111146));gbkey=tRNA;product=tRNA-Thr NC_009708.1 RefSeq gene 3111185 3111272 . - . ID=gene2764;Name=YPSIP31758_RS15045;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15045;old_locus_tag=YpsIP31758_4245 NC_009708.1 tRNAscan-SE tRNA 3111185 3111272 . - . ID=rna75;Parent=gene2764;anticodon=(pos:complement(3111236..3111238));gbkey=tRNA;product=tRNA-Ser NC_009708.1 tRNAscan-SE exon 3111185 3111272 . - . ID=id244;Parent=rna75;anticodon=(pos:complement(3111236..3111238));gbkey=tRNA;product=tRNA-Ser NC_009708.1 RefSeq gene 3111543 3112004 . - . ID=gene2765;Name=YPSIP31758_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15050;old_locus_tag=YpsIP31758_2759 NC_009708.1 Protein Homology CDS 3111543 3112004 . - 0 ID=cds2684;Parent=gene2765;Dbxref=Genbank:WP_012105445.1;Name=WP_012105445.1;gbkey=CDS;product=50S ribosomal protein L21;protein_id=WP_012105445.1;transl_table=11 NC_009708.1 RefSeq gene 3112152 3112760 . + . ID=gene2766;Name=YPSIP31758_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15055;old_locus_tag=YpsIP31758_2760 NC_009708.1 Protein Homology CDS 3112152 3112760 . + 0 ID=cds2685;Parent=gene2766;Dbxref=Genbank:WP_012304343.1;Name=WP_012304343.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_012304343.1;transl_table=11 NC_009708.1 RefSeq gene 3112797 3113912 . - . ID=gene2767;Name=YPSIP31758_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15060;old_locus_tag=YpsIP31758_2761 NC_009708.1 Protein Homology CDS 3112797 3113912 . - 0 ID=cds2686;Parent=gene2767;Dbxref=Genbank:WP_002210826.1;Name=WP_002210826.1;gbkey=CDS;product=porin;protein_id=WP_002210826.1;transl_table=11 NC_009708.1 RefSeq gene 3114232 3114318 . + . ID=gene2768;Name=micF;gbkey=Gene;gene=micF;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22480 NC_009708.1 RefSeq transcript 3114232 3114318 . + . ID=rna76;Parent=gene2768;gbkey=misc_RNA;gene=micF;product=micF RNA NC_009708.1 RefSeq exon 3114232 3114318 . + . ID=id245;Parent=rna76;gbkey=misc_RNA;gene=micF;product=micF RNA NC_009708.1 RefSeq gene 3115016 3116170 . + . ID=gene2769;Name=YPSIP31758_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15065;old_locus_tag=YpsIP31758_2762 NC_009708.1 Protein Homology CDS 3115016 3116170 . + 0 ID=cds2687;Parent=gene2769;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NC_009708.1 RefSeq gene 3116194 3118887 . + . ID=gene2770;Name=YPSIP31758_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15070;old_locus_tag=YpsIP31758_2763 NC_009708.1 Protein Homology CDS 3116194 3118887 . + 0 ID=cds2688;Parent=gene2770;Dbxref=Genbank:WP_011191996.1;Name=WP_011191996.1;gbkey=CDS;product=ATPase;protein_id=WP_011191996.1;transl_table=11 NC_009708.1 RefSeq gene 3118890 3119543 . + . ID=gene2771;Name=YPSIP31758_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15075;old_locus_tag=YpsIP31758_2764 NC_009708.1 Protein Homology CDS 3118890 3119543 . + 0 ID=cds2689;Parent=gene2771;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11 NC_009708.1 RefSeq gene 3119611 3122391 . - . ID=gene2772;Name=YPSIP31758_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15080;old_locus_tag=YpsIP31758_2765 NC_009708.1 Protein Homology CDS 3119611 3122391 . - 0 ID=cds2690;Parent=gene2772;Dbxref=Genbank:WP_041175779.1;Name=WP_041175779.1;gbkey=CDS;product=histidine kinase;protein_id=WP_041175779.1;transl_table=11 NC_009708.1 RefSeq gene 3122544 3122669 . - . ID=gene2773;Name=YPSIP31758_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15085;old_locus_tag=YpsIP31758_2766 NC_009708.1 Protein Homology CDS 3122544 3122669 . - 0 ID=cds2691;Parent=gene2773;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11 NC_009708.1 RefSeq gene 3122672 3125365 . - . ID=gene2774;Name=YPSIP31758_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15090;old_locus_tag=YpsIP31758_2767 NC_009708.1 Protein Homology CDS 3122672 3125365 . - 0 ID=cds2692;Parent=gene2774;Dbxref=Genbank:WP_012105449.1;Name=WP_012105449.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_012105449.1;transl_table=11 NC_009708.1 RefSeq gene 3125665 3126393 . + . ID=gene2775;Name=YPSIP31758_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15095;old_locus_tag=YpsIP31758_2768 NC_009708.1 Protein Homology CDS 3125665 3126393 . + 0 ID=cds2693;Parent=gene2775;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11 NC_009708.1 RefSeq gene 3126887 3129175 . + . ID=gene2776;Name=YPSIP31758_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15100;old_locus_tag=YpsIP31758_2769 NC_009708.1 Protein Homology CDS 3126887 3129175 . + 0 ID=cds2694;Parent=gene2776;Dbxref=Genbank:WP_002210818.1;Name=WP_002210818.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NC_009708.1 RefSeq gene 3129337 3130467 . + . ID=gene2777;Name=YPSIP31758_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15105;old_locus_tag=YpsIP31758_2770 NC_009708.1 Protein Homology CDS 3129337 3130467 . + 0 ID=cds2695;Parent=gene2777;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NC_009708.1 RefSeq gene 3130471 3130728 . + . ID=gene2778;Name=YPSIP31758_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15110;old_locus_tag=YpsIP31758_2771 NC_009708.1 Protein Homology CDS 3130471 3130728 . + 0 ID=cds2696;Parent=gene2778;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11 NC_009708.1 RefSeq gene 3130763 3131272 . + . ID=gene2779;Name=YPSIP31758_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15115;old_locus_tag=YpsIP31758_2772 NC_009708.1 Protein Homology CDS 3130763 3131272 . + 0 ID=cds2697;Parent=gene2779;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11 NC_009708.1 RefSeq gene 3131330 3132523 . - . ID=gene2780;Name=YPSIP31758_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15120;old_locus_tag=YpsIP31758_2773 NC_009708.1 Protein Homology CDS 3131330 3132523 . - 0 ID=cds2698;Parent=gene2780;Dbxref=Genbank:WP_012105450.1;Name=WP_012105450.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105450.1;transl_table=11 NC_009708.1 RefSeq gene 3133142 3134350 . + . ID=gene2781;Name=YPSIP31758_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15125;old_locus_tag=YpsIP31758_2774 NC_009708.1 Protein Homology CDS 3133142 3134350 . + 0 ID=cds2699;Parent=gene2781;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NC_009708.1 RefSeq gene 3134607 3135149 . - . ID=gene2782;Name=YPSIP31758_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15130;old_locus_tag=YpsIP31758_2775 NC_009708.1 Protein Homology CDS 3134607 3135149 . - 0 ID=cds2700;Parent=gene2782;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11 NC_009708.1 RefSeq gene 3135491 3136933 . + . ID=gene2783;Name=YPSIP31758_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15135;old_locus_tag=YpsIP31758_2776 NC_009708.1 Protein Homology CDS 3135491 3136933 . + 0 ID=cds2701;Parent=gene2783;Dbxref=Genbank:WP_041175780.1;Name=WP_041175780.1;gbkey=CDS;product=catalase;protein_id=WP_041175780.1;transl_table=11 NC_009708.1 RefSeq gene 3137001 3139181 . - . ID=gene2784;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15140;old_locus_tag=YpsIP31758_2777 NC_009708.1 Protein Homology CDS 3137001 3139181 . - 0 ID=cds2702;Parent=gene2784;Dbxref=Genbank:WP_011191991.1;Name=WP_011191991.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_011191991.1;transl_table=11 NC_009708.1 RefSeq gene 3139451 3140566 . + . ID=gene2785;Name=YPSIP31758_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15145;old_locus_tag=YpsIP31758_2778 NC_009708.1 Protein Homology CDS 3139451 3140566 . + 0 ID=cds2703;Parent=gene2785;Dbxref=Genbank:WP_012105452.1;Name=WP_012105452.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_012105452.1;transl_table=11 NC_009708.1 RefSeq gene 3140603 3140785 . - . ID=gene2786;Name=YPSIP31758_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15150 NC_009708.1 Protein Homology CDS 3140603 3140785 . - 0 ID=cds2704;Parent=gene2786;Dbxref=Genbank:WP_033848291.1;Name=WP_033848291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033848291.1;transl_table=11 NC_009708.1 RefSeq gene 3140978 3141868 . + . ID=gene2787;Name=YPSIP31758_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15155;old_locus_tag=YpsIP31758_2779 NC_009708.1 Protein Homology CDS 3140978 3141868 . + 0 ID=cds2705;Parent=gene2787;Dbxref=Genbank:WP_011191989.1;Name=WP_011191989.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_011191989.1;transl_table=11 NC_009708.1 RefSeq gene 3141993 3142211 . + . ID=gene2788;Name=YPSIP31758_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15160;old_locus_tag=YpsIP31758_2780 NC_009708.1 Protein Homology CDS 3141993 3142211 . + 0 ID=cds2706;Parent=gene2788;Dbxref=Genbank:WP_012105453.1;Name=WP_012105453.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105453.1;transl_table=11 NC_009708.1 RefSeq gene 3142329 3144635 . - . ID=gene2789;Name=YPSIP31758_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15165;old_locus_tag=YpsIP31758_2781 NC_009708.1 Protein Homology CDS 3142329 3144635 . - 0 ID=cds2707;Parent=gene2789;Dbxref=Genbank:WP_011191987.1;Name=WP_011191987.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_011191987.1;transl_table=11 NC_009708.1 RefSeq gene 3144705 3146039 . - . ID=gene2790;Name=YPSIP31758_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15170;old_locus_tag=YpsIP31758_2782 NC_009708.1 Protein Homology CDS 3144705 3146039 . - 0 ID=cds2708;Parent=gene2790;Dbxref=Genbank:WP_011191986.1;Name=WP_011191986.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_011191986.1;transl_table=11 NC_009708.1 RefSeq gene 3146493 3147329 . - . ID=gene2791;Name=YPSIP31758_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15175;old_locus_tag=YpsIP31758_2783 NC_009708.1 Protein Homology CDS 3146493 3147329 . - 0 ID=cds2709;Parent=gene2791;Dbxref=Genbank:WP_002210803.1;Name=WP_002210803.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210803.1;transl_table=11 NC_009708.1 RefSeq gene 3147326 3148264 . - . ID=gene2792;Name=YPSIP31758_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15180;old_locus_tag=YpsIP31758_2784 NC_009708.1 Protein Homology CDS 3147326 3148264 . - 0 ID=cds2710;Parent=gene2792;Dbxref=Genbank:WP_012105454.1;Name=WP_012105454.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_012105454.1;transl_table=11 NC_009708.1 RefSeq gene 3148261 3149415 . - . ID=gene2793;Name=YPSIP31758_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15185;old_locus_tag=YpsIP31758_2785 NC_009708.1 Protein Homology CDS 3148261 3149415 . - 0 ID=cds2711;Parent=gene2793;Dbxref=Genbank:WP_012105455.1;Name=WP_012105455.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_012105455.1;transl_table=11 NC_009708.1 RefSeq gene 3149676 3150608 . - . ID=gene2794;Name=YPSIP31758_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15190;old_locus_tag=YpsIP31758_2786 NC_009708.1 Protein Homology CDS 3149676 3150608 . - 0 ID=cds2712;Parent=gene2794;Dbxref=Genbank:WP_011191984.1;Name=WP_011191984.1;gbkey=CDS;product=osmoprotectant uptake system substrate-binding protein;protein_id=WP_011191984.1;transl_table=11 NC_009708.1 RefSeq gene 3151344 3152198 . + . ID=gene2795;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15195;old_locus_tag=YpsIP31758_2787 NC_009708.1 Protein Homology CDS 3151344 3152198 . + 0 ID=cds2713;Parent=gene2795;Dbxref=Genbank:WP_012105456.1;Name=WP_012105456.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_012105456.1;transl_table=11 NC_009708.1 RefSeq gene 3152332 3153747 . - . ID=gene2796;Name=YPSIP31758_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15200;old_locus_tag=YpsIP31758_2788 NC_009708.1 Protein Homology CDS 3152332 3153747 . - 0 ID=cds2714;Parent=gene2796;Dbxref=Genbank:WP_012105457.1;Name=WP_012105457.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_012105457.1;transl_table=11 NC_009708.1 RefSeq gene 3153771 3154628 . - . ID=gene2797;Name=YPSIP31758_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15205;old_locus_tag=YpsIP31758_2789 NC_009708.1 Protein Homology CDS 3153771 3154628 . - 0 ID=cds2715;Parent=gene2797;Dbxref=Genbank:WP_012105458.1;Name=WP_012105458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105458.1;transl_table=11 NC_009708.1 RefSeq gene 3154743 3155441 . - . ID=gene2798;Name=YPSIP31758_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15210;old_locus_tag=YpsIP31758_2790 NC_009708.1 Protein Homology CDS 3154743 3155441 . - 0 ID=cds2716;Parent=gene2798;Dbxref=Genbank:WP_011191980.1;Name=WP_011191980.1;gbkey=CDS;product=urea ABC transporter ATP-binding protein;protein_id=WP_011191980.1;transl_table=11 NC_009708.1 RefSeq gene 3155535 3156371 . - . ID=gene2799;Name=YPSIP31758_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15215;old_locus_tag=YpsIP31758_2791 NC_009708.1 Protein Homology CDS 3155535 3156371 . - 0 ID=cds2717;Parent=gene2799;Dbxref=Genbank:WP_002210795.1;Name=WP_002210795.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210795.1;transl_table=11 NC_009708.1 RefSeq gene 3156368 3157444 . - . ID=gene2800;Name=YPSIP31758_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15220;old_locus_tag=YpsIP31758_2792 NC_009708.1 Protein Homology CDS 3156368 3157444 . - 0 ID=cds2718;Parent=gene2800;Dbxref=Genbank:WP_012105459.1;Name=WP_012105459.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_012105459.1;transl_table=11 NC_009708.1 RefSeq gene 3157444 3159045 . - . ID=gene2801;Name=YPSIP31758_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15225;old_locus_tag=YpsIP31758_2793 NC_009708.1 Protein Homology CDS 3157444 3159045 . - 0 ID=cds2719;Parent=gene2801;Dbxref=Genbank:WP_049756385.1;Name=WP_049756385.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_049756385.1;transl_table=11 NC_009708.1 RefSeq gene 3159169 3160437 . - . ID=gene2802;Name=YPSIP31758_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15230;old_locus_tag=YpsIP31758_2794 NC_009708.1 Protein Homology CDS 3159169 3160437 . - 0 ID=cds2720;Parent=gene2802;Dbxref=Genbank:WP_012105460.1;Name=WP_012105460.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_012105460.1;transl_table=11 NC_009708.1 RefSeq gene 3160906 3161379 . - . ID=gene2803;Name=YPSIP31758_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15235;old_locus_tag=YpsIP31758_2795 NC_009708.1 Protein Homology CDS 3160906 3161379 . - 0 ID=cds2721;Parent=gene2803;Dbxref=Genbank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210791.1;transl_table=11 NC_009708.1 RefSeq gene 3161624 3162505 . - . ID=gene2804;Name=YPSIP31758_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15240;old_locus_tag=YpsIP31758_2796 NC_009708.1 Protein Homology CDS 3161624 3162505 . - 0 ID=cds2722;Parent=gene2804;Dbxref=Genbank:WP_012105461.1;Name=WP_012105461.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_012105461.1;transl_table=11 NC_009708.1 RefSeq gene 3162508 3163368 . - . ID=gene2805;Name=YPSIP31758_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15245;old_locus_tag=YpsIP31758_2797 NC_009708.1 Protein Homology CDS 3162508 3163368 . - 0 ID=cds2723;Parent=gene2805;Dbxref=Genbank:WP_002210789.1;Name=WP_002210789.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210789.1;transl_table=11 NC_009708.1 RefSeq gene 3163455 3164384 . - . ID=gene2806;Name=YPSIP31758_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15250;old_locus_tag=YpsIP31758_2798 NC_009708.1 Protein Homology CDS 3163455 3164384 . - 0 ID=cds2724;Parent=gene2806;Dbxref=Genbank:WP_012105462.1;Name=WP_012105462.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_012105462.1;transl_table=11 NC_009708.1 RefSeq gene 3164421 3165257 . - . ID=gene2807;Name=YPSIP31758_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15255;old_locus_tag=YpsIP31758_2799 NC_009708.1 Protein Homology CDS 3164421 3165257 . - 0 ID=cds2725;Parent=gene2807;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11 NC_009708.1 RefSeq gene 3165465 3165713 . - . ID=gene2808;Name=YPSIP31758_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15260;old_locus_tag=YpsIP31758_2800 NC_009708.1 Protein Homology CDS 3165465 3165713 . - 0 ID=cds2726;Parent=gene2808;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11 NC_009708.1 RefSeq gene 3165898 3167001 . - . ID=gene2809;Name=YPSIP31758_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15265;old_locus_tag=YpsIP31758_2801 NC_009708.1 Protein Homology CDS 3165898 3167001 . - 0 ID=cds2727;Parent=gene2809;Dbxref=Genbank:WP_011191976.1;Name=WP_011191976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191976.1;transl_table=11 NC_009708.1 RefSeq gene 3167314 3167655 . + . ID=gene2810;Name=YPSIP31758_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15270;old_locus_tag=YpsIP31758_2803 NC_009708.1 Protein Homology CDS 3167314 3167655 . + 0 ID=cds2728;Parent=gene2810;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11 NC_009708.1 RefSeq gene 3167681 3168220 . - . ID=gene2811;Name=YPSIP31758_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15275;old_locus_tag=YpsIP31758_2804 NC_009708.1 Protein Homology CDS 3167681 3168220 . - 0 ID=cds2729;Parent=gene2811;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NC_009708.1 RefSeq gene 3168430 3170142 . + . ID=gene2812;Name=YPSIP31758_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15280;old_locus_tag=YpsIP31758_2805 NC_009708.1 Protein Homology CDS 3168430 3170142 . + 0 ID=cds2730;Parent=gene2812;Dbxref=Genbank:WP_012105463.1;Name=WP_012105463.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_012105463.1;transl_table=11 NC_009708.1 RefSeq gene 3170263 3171198 . - . ID=gene2813;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15285;old_locus_tag=YpsIP31758_2806 NC_009708.1 Protein Homology CDS 3170263 3171198 . - 0 ID=cds2731;Parent=gene2813;Dbxref=Genbank:WP_012105464.1;Name=WP_012105464.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_012105464.1;transl_table=11 NC_009708.1 RefSeq gene 3171538 3171717 . + . ID=gene2814;Name=YPSIP31758_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15290;old_locus_tag=YpsIP31758_2807 NC_009708.1 Protein Homology CDS 3171538 3171717 . + 0 ID=cds2732;Parent=gene2814;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11 NC_009708.1 RefSeq gene 3171791 3172729 . - . ID=gene2815;Name=YPSIP31758_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15295;old_locus_tag=YpsIP31758_2808 NC_009708.1 Protein Homology CDS 3171791 3172729 . - 0 ID=cds2733;Parent=gene2815;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11 NC_009708.1 RefSeq gene 3173029 3173316 . - . ID=gene2816;Name=YPSIP31758_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15300 NC_009708.1 Protein Homology CDS 3173029 3173316 . - 0 ID=cds2734;Parent=gene2816;Dbxref=Genbank:WP_041175880.1;Name=WP_041175880.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175880.1;transl_table=11 NC_009708.1 RefSeq gene 3174341 3175696 . - . ID=gene2817;Name=YPSIP31758_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15310;old_locus_tag=YpsIP31758_2810 NC_009708.1 Protein Homology CDS 3174341 3175696 . - 0 ID=cds2735;Parent=gene2817;Dbxref=Genbank:WP_002220152.1;Name=WP_002220152.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_002220152.1;transl_table=11 NC_009708.1 RefSeq gene 3176087 3176797 . + . ID=gene2818;Name=YPSIP31758_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15315;old_locus_tag=YpsIP31758_2811 NC_009708.1 Protein Homology CDS 3176087 3176797 . + 0 ID=cds2736;Parent=gene2818;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NC_009708.1 RefSeq gene 3176849 3177835 . + . ID=gene2819;Name=YPSIP31758_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15320;old_locus_tag=YpsIP31758_2812 NC_009708.1 Protein Homology CDS 3176849 3177835 . + 0 ID=cds2737;Parent=gene2819;Dbxref=Genbank:WP_002220156.1;Name=WP_002220156.1;gbkey=CDS;product=transporter;protein_id=WP_002220156.1;transl_table=11 NC_009708.1 RefSeq gene 3177849 3179591 . + . ID=gene2820;Name=YPSIP31758_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15325;old_locus_tag=YpsIP31758_2813 NC_009708.1 Protein Homology CDS 3177849 3179591 . + 0 ID=cds2738;Parent=gene2820;Dbxref=Genbank:WP_011191972.1;Name=WP_011191972.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191972.1;transl_table=11 NC_009708.1 RefSeq gene 3179596 3180771 . + . ID=gene2821;Name=YPSIP31758_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15330;old_locus_tag=YpsIP31758_2814 NC_009708.1 Protein Homology CDS 3179596 3180771 . + 0 ID=cds2739;Parent=gene2821;Dbxref=Genbank:WP_002230687.1;Name=WP_002230687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230687.1;transl_table=11 NC_009708.1 RefSeq gene 3180784 3181890 . + . ID=gene2822;Name=YPSIP31758_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15335;old_locus_tag=YpsIP31758_2815 NC_009708.1 Protein Homology CDS 3180784 3181890 . + 0 ID=cds2740;Parent=gene2822;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11 NC_009708.1 RefSeq gene 3181929 3182255 . - . ID=gene2823;Name=YPSIP31758_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15340;old_locus_tag=YpsIP31758_2816 NC_009708.1 Protein Homology CDS 3181929 3182255 . - 0 ID=cds2741;Parent=gene2823;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11 NC_009708.1 RefSeq gene 3182266 3182493 . - . ID=gene2824;Name=YPSIP31758_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15345;old_locus_tag=YpsIP31758_2817 NC_009708.1 Protein Homology CDS 3182266 3182493 . - 0 ID=cds2742;Parent=gene2824;Dbxref=Genbank:WP_012105465.1;Name=WP_012105465.1;gbkey=CDS;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_012105465.1;transl_table=11 NC_009708.1 RefSeq gene 3182825 3183736 . + . ID=gene2825;Name=YPSIP31758_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15350;old_locus_tag=YpsIP31758_2818 NC_009708.1 Protein Homology CDS 3182825 3183736 . + 0 ID=cds2743;Parent=gene2825;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11 NC_009708.1 RefSeq gene 3183737 3184846 . - . ID=gene2826;Name=YPSIP31758_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15355;old_locus_tag=YpsIP31758_2819 NC_009708.1 Protein Homology CDS 3183737 3184846 . - 0 ID=cds2744;Parent=gene2826;Dbxref=Genbank:WP_012105466.1;Name=WP_012105466.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_012105466.1;transl_table=11 NC_009708.1 RefSeq gene 3185194 3186558 . - . ID=gene2827;Name=YPSIP31758_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15360;old_locus_tag=YpsIP31758_2820 NC_009708.1 Protein Homology CDS 3185194 3186558 . - 0 ID=cds2745;Parent=gene2827;Dbxref=Genbank:WP_012105467.1;Name=WP_012105467.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_012105467.1;transl_table=11 NC_009708.1 RefSeq gene 3186545 3188359 . - . ID=gene2828;Name=YPSIP31758_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15365;old_locus_tag=YpsIP31758_2821 NC_009708.1 Protein Homology CDS 3186545 3188359 . - 0 ID=cds2746;Parent=gene2828;Dbxref=Genbank:WP_012105468.1;Name=WP_012105468.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_012105468.1;transl_table=11 NC_009708.1 RefSeq gene 3188717 3189190 . + . ID=gene2829;Name=YPSIP31758_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15370;old_locus_tag=YpsIP31758_2822 NC_009708.1 Protein Homology CDS 3188717 3189190 . + 0 ID=cds2747;Parent=gene2829;Dbxref=Genbank:WP_012105469.1;Name=WP_012105469.1;gbkey=CDS;product=zinc resistance protein;protein_id=WP_012105469.1;transl_table=11 NC_009708.1 RefSeq gene 3189278 3190534 . - . ID=gene2830;Name=YPSIP31758_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15375;old_locus_tag=YpsIP31758_2823 NC_009708.1 Protein Homology CDS 3189278 3190534 . - 0 ID=cds2748;Parent=gene2830;Dbxref=Genbank:WP_011191967.1;Name=WP_011191967.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_011191967.1;transl_table=11 NC_009708.1 RefSeq gene 3190673 3191536 . - . ID=gene2831;Name=YPSIP31758_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15380;old_locus_tag=YpsIP31758_2824 NC_009708.1 Protein Homology CDS 3190673 3191536 . - 0 ID=cds2749;Parent=gene2831;Dbxref=Genbank:WP_011191966.1;Name=WP_011191966.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_011191966.1;transl_table=11 NC_009708.1 RefSeq gene 3191882 3192730 . + . ID=gene2832;Name=YPSIP31758_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15385;old_locus_tag=YpsIP31758_2825 NC_009708.1 Protein Homology CDS 3191882 3192730 . + 0 ID=cds2750;Parent=gene2832;Dbxref=Genbank:WP_041175781.1;Name=WP_041175781.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_041175781.1;transl_table=11 NC_009708.1 RefSeq gene 3192768 3193661 . - . ID=gene2833;Name=YPSIP31758_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15390;old_locus_tag=YpsIP31758_2826 NC_009708.1 Protein Homology CDS 3192768 3193661 . - 0 ID=cds2751;Parent=gene2833;Dbxref=Genbank:WP_012105471.1;Name=WP_012105471.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_012105471.1;transl_table=11 NC_009708.1 RefSeq gene 3193902 3195950 . - . ID=gene2834;Name=YPSIP31758_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15395;old_locus_tag=YpsIP31758_2828 NC_009708.1 Protein Homology CDS 3193902 3195950 . - 0 ID=cds2752;Parent=gene2834;Dbxref=Genbank:WP_012105472.1;Name=WP_012105472.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_012105472.1;transl_table=11 NC_009708.1 RefSeq gene 3196316 3196912 . + . ID=gene2835;Name=YPSIP31758_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15400;old_locus_tag=YpsIP31758_2829 NC_009708.1 Protein Homology CDS 3196316 3196912 . + 0 ID=cds2753;Parent=gene2835;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11 NC_009708.1 RefSeq gene 3196970 3198442 . + . ID=gene2836;Name=YPSIP31758_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15405;old_locus_tag=YpsIP31758_2830 NC_009708.1 Protein Homology CDS 3196970 3198442 . + 0 ID=cds2754;Parent=gene2836;Dbxref=Genbank:WP_012105473.1;Name=WP_012105473.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_012105473.1;transl_table=11 NC_009708.1 RefSeq gene 3198465 3200168 . + . ID=gene2837;Name=YPSIP31758_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15410;old_locus_tag=YpsIP31758_2831 NC_009708.1 Protein Homology CDS 3198465 3200168 . + 0 ID=cds2755;Parent=gene2837;Dbxref=Genbank:WP_012105474.1;Name=WP_012105474.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=oxygen-dependent choline dehydrogenase;protein_id=WP_012105474.1;transl_table=11 NC_009708.1 RefSeq gene 3200379 3201089 . - . ID=gene2838;Name=YPSIP31758_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15415;old_locus_tag=YpsIP31758_2832 NC_009708.1 Protein Homology CDS 3200379 3201089 . - 0 ID=cds2756;Parent=gene2838;Dbxref=Genbank:WP_011191961.1;Name=WP_011191961.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191961.1;transl_table=11 NC_009708.1 RefSeq gene 3201232 3201684 . - . ID=gene2839;Name=YPSIP31758_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15420;old_locus_tag=YpsIP31758_2833 NC_009708.1 Protein Homology CDS 3201232 3201684 . - 0 ID=cds2757;Parent=gene2839;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11 NC_009708.1 RefSeq gene 3201687 3201932 . - . ID=gene2840;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15425;old_locus_tag=YpsIP31758_2834 NC_009708.1 Protein Homology CDS 3201687 3201932 . - 0 ID=cds2758;Parent=gene2840;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11 NC_009708.1 RefSeq gene 3201929 3202408 . - . ID=gene2841;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15430;old_locus_tag=YpsIP31758_2835 NC_009708.1 Protein Homology CDS 3201929 3202408 . - 0 ID=cds2759;Parent=gene2841;Dbxref=Genbank:WP_002210772.1;Name=WP_002210772.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_002210772.1;transl_table=11 NC_009708.1 RefSeq gene 3202631 3203611 . - . ID=gene2842;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15435;old_locus_tag=YpsIP31758_2836 NC_009708.1 Protein Homology CDS 3202631 3203611 . - 0 ID=cds2760;Parent=gene2842;Dbxref=Genbank:WP_002210771.1;Name=WP_002210771.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_002210771.1;transl_table=11 NC_009708.1 RefSeq gene 3203863 3204009 . + . ID=gene2843;Name=YPSIP31758_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15440 NC_009708.1 Protein Homology CDS 3203863 3204009 . + 0 ID=cds2761;Parent=gene2843;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11 NC_009708.1 RefSeq gene 3204143 3205066 . + . ID=gene2844;Name=YPSIP31758_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15445;old_locus_tag=YpsIP31758_2837 NC_009708.1 Protein Homology CDS 3204143 3205066 . + 0 ID=cds2762;Parent=gene2844;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11 NC_009708.1 RefSeq gene 3205197 3205442 . - . ID=gene2845;Name=YPSIP31758_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15450;old_locus_tag=YpsIP31758_2838 NC_009708.1 Protein Homology CDS 3205197 3205442 . - 0 ID=cds2763;Parent=gene2845;Dbxref=Genbank:WP_012105475.1;Name=WP_012105475.1;gbkey=CDS;product=transporter;protein_id=WP_012105475.1;transl_table=11 NC_009708.1 RefSeq gene 3205753 3207768 . - . ID=gene2846;Name=YPSIP31758_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15455;old_locus_tag=YpsIP31758_2839 NC_009708.1 Protein Homology CDS 3205753 3207768 . - 0 ID=cds2764;Parent=gene2846;Dbxref=Genbank:WP_011191959.1;Name=WP_011191959.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_011191959.1;transl_table=11 NC_009708.1 RefSeq gene 3208859 3209569 . + . ID=gene2847;Name=YPSIP31758_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15460;old_locus_tag=YpsIP31758_2840 NC_009708.1 Protein Homology CDS 3208859 3209569 . + 0 ID=cds2765;Parent=gene2847;Dbxref=Genbank:WP_012105476.1;Name=WP_012105476.1;gbkey=CDS;product=branched-chain amino acid ABC transporter ATP-binding protein;protein_id=WP_012105476.1;transl_table=11 NC_009708.1 RefSeq gene 3209724 3210446 . - . ID=gene2848;Name=YPSIP31758_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15465;old_locus_tag=YpsIP31758_2841 NC_009708.1 Protein Homology CDS 3209724 3210446 . - 0 ID=cds2766;Parent=gene2848;Dbxref=Genbank:WP_012105477.1;Name=WP_012105477.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_012105477.1;transl_table=11 NC_009708.1 RefSeq gene 3210439 3211242 . - . ID=gene2849;Name=YPSIP31758_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15470;old_locus_tag=YpsIP31758_2842 NC_009708.1 Protein Homology CDS 3210439 3211242 . - 0 ID=cds2767;Parent=gene2849;Dbxref=Genbank:WP_012105478.1;Name=WP_012105478.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_012105478.1;transl_table=11 NC_009708.1 RefSeq gene 3211226 3212377 . - . ID=gene2850;Name=YPSIP31758_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15475;old_locus_tag=YpsIP31758_2843 NC_009708.1 Protein Homology CDS 3211226 3212377 . - 0 ID=cds2768;Parent=gene2850;Dbxref=Genbank:WP_012105479.1;Name=WP_012105479.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_012105479.1;transl_table=11 NC_009708.1 RefSeq gene 3212377 3213414 . - . ID=gene2851;Name=YPSIP31758_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15480;old_locus_tag=YpsIP31758_2844 NC_009708.1 Protein Homology CDS 3212377 3213414 . - 0 ID=cds2769;Parent=gene2851;Dbxref=Genbank:WP_012105481.1;Name=WP_012105481.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_012105481.1;transl_table=11 NC_009708.1 RefSeq gene 3213513 3214793 . + . ID=gene2852;Name=YPSIP31758_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15485;old_locus_tag=YpsIP31758_2845 NC_009708.1 Protein Homology CDS 3213513 3214793 . + 0 ID=cds2770;Parent=gene2852;Dbxref=Genbank:WP_012105482.1;Name=WP_012105482.1;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_012105482.1;transl_table=11 NC_009708.1 RefSeq gene 3214978 3215982 . - . ID=gene2853;Name=YPSIP31758_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15490;old_locus_tag=YpsIP31758_2846 NC_009708.1 Protein Homology CDS 3214978 3215982 . - 0 ID=cds2771;Parent=gene2853;Dbxref=Genbank:WP_002210760.1;Name=WP_002210760.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_002210760.1;transl_table=11 NC_009708.1 RefSeq gene 3216273 3217094 . + . ID=gene2854;Name=YPSIP31758_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15495;old_locus_tag=YpsIP31758_2847 NC_009708.1 Protein Homology CDS 3216273 3217094 . + 0 ID=cds2772;Parent=gene2854;Dbxref=Genbank:WP_012105483.1;Name=WP_012105483.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_012105483.1;transl_table=11 NC_009708.1 RefSeq gene 3217150 3218229 . - . ID=gene2855;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15500;old_locus_tag=YpsIP31758_2848 NC_009708.1 Protein Homology CDS 3217150 3218229 . - 0 ID=cds2773;Parent=gene2855;Dbxref=Genbank:WP_012105484.1;Name=WP_012105484.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_012105484.1;transl_table=11 NC_009708.1 RefSeq gene 3218223 3218918 . - . ID=gene2856;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YPSIP31758_RS15505;old_locus_tag=YpsIP31758_2849 NC_009708.1 Protein Homology CDS 3218223 3218918 . - 0 ID=cds2774;Parent=gene2856;Dbxref=Genbank:WP_012105485.1;Name=WP_012105485.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_012105485.1;transl_table=11 NC_009708.1 RefSeq gene 3218918 3219697 . - . ID=gene2857;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15510;old_locus_tag=YpsIP31758_2850 NC_009708.1 Protein Homology CDS 3218918 3219697 . - 0 ID=cds2775;Parent=gene2857;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NC_009708.1 RefSeq gene 3219932 3220084 . - . ID=gene2858;Name=YPSIP31758_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15515;old_locus_tag=YpsIP31758_2851 NC_009708.1 Protein Homology CDS 3219932 3220084 . - 0 ID=cds2776;Parent=gene2858;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11 NC_009708.1 RefSeq gene 3220350 3221141 . + . ID=gene2859;Name=YPSIP31758_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15520;old_locus_tag=YpsIP31758_2852 NC_009708.1 Protein Homology CDS 3220350 3221141 . + 0 ID=cds2777;Parent=gene2859;Dbxref=Genbank:WP_012105486.1;Name=WP_012105486.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105486.1;transl_table=11 NC_009708.1 RefSeq gene 3221251 3222741 . + . ID=gene2860;Name=YPSIP31758_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15525;old_locus_tag=YpsIP31758_2853 NC_009708.1 Protein Homology CDS 3221251 3222741 . + 0 ID=cds2778;Parent=gene2860;Dbxref=Genbank:WP_012105487.1;Name=WP_012105487.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_012105487.1;transl_table=11 NC_009708.1 RefSeq gene 3222774 3222902 . + . ID=gene2861;Name=YPSIP31758_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15530 NC_009708.1 Protein Homology CDS 3222774 3222902 . + 0 ID=cds2779;Parent=gene2861;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11 NC_009708.1 RefSeq gene 3222957 3223775 . + . ID=gene2862;Name=YPSIP31758_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15535;old_locus_tag=YpsIP31758_2854 NC_009708.1 Protein Homology CDS 3222957 3223775 . + 0 ID=cds2780;Parent=gene2862;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11 NC_009708.1 RefSeq gene 3224135 3225151 . + . ID=gene2863;Name=YPSIP31758_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15540;old_locus_tag=YpsIP31758_2855 NC_009708.1 Protein Homology CDS 3224135 3225151 . + 0 ID=cds2781;Parent=gene2863;Dbxref=Genbank:WP_002230680.1;Name=WP_002230680.1;gbkey=CDS;product=UDP-galactose-4-epimerase;protein_id=WP_002230680.1;transl_table=11 NC_009708.1 RefSeq gene 3225161 3226213 . + . ID=gene2864;Name=YPSIP31758_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15545;old_locus_tag=YpsIP31758_2856 NC_009708.1 Protein Homology CDS 3225161 3226213 . + 0 ID=cds2782;Parent=gene2864;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NC_009708.1 RefSeq gene 3226210 3227361 . + . ID=gene2865;Name=YPSIP31758_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15550;old_locus_tag=YpsIP31758_2857 NC_009708.1 Protein Homology CDS 3226210 3227361 . + 0 ID=cds2783;Parent=gene2865;Dbxref=Genbank:WP_002210748.1;Name=WP_002210748.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NC_009708.1 RefSeq gene 3227355 3228425 . + . ID=gene2866;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15555;old_locus_tag=YpsIP31758_2858 NC_009708.1 Protein Homology CDS 3227355 3228425 . + 0 ID=cds2784;Parent=gene2866;Dbxref=Genbank:WP_012105488.1;Name=WP_012105488.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_012105488.1;transl_table=11 NC_009708.1 RefSeq gene 3228718 3229053 . + . ID=gene2867;Name=YPSIP31758_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15560;old_locus_tag=YpsIP31758_2859 NC_009708.1 Protein Homology CDS 3228718 3229053 . + 0 ID=cds2785;Parent=gene2867;Dbxref=Genbank:WP_011191948.1;Name=WP_011191948.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_011191948.1;transl_table=11 NC_009708.1 RefSeq gene 3229400 3230152 . + . ID=gene2868;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15565;old_locus_tag=YpsIP31758_2861 NC_009708.1 Protein Homology CDS 3229400 3230152 . + 0 ID=cds2786;Parent=gene2868;Dbxref=Genbank:WP_002210746.1;Name=WP_002210746.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NC_009708.1 RefSeq gene 3230334 3231386 . - . ID=gene2869;Name=YPSIP31758_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15570;old_locus_tag=YpsIP31758_2862 NC_009708.1 Protein Homology CDS 3230334 3231386 . - 0 ID=cds2787;Parent=gene2869;Dbxref=Genbank:WP_002223549.1;Name=WP_002223549.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002223549.1;transl_table=11 NC_009708.1 RefSeq gene 3231853 3232791 . + . ID=gene2870;Name=YPSIP31758_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15575;old_locus_tag=YpsIP31758_2863 NC_009708.1 Protein Homology CDS 3231853 3232791 . + 0 ID=cds2788;Parent=gene2870;Dbxref=Genbank:WP_002210743.1;Name=WP_002210743.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_002210743.1;transl_table=11 NC_009708.1 RefSeq gene 3232906 3233631 . - . ID=gene2871;Name=YPSIP31758_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15580;old_locus_tag=YpsIP31758_2864 NC_009708.1 Protein Homology CDS 3232906 3233631 . - 0 ID=cds2789;Parent=gene2871;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NC_009708.1 RefSeq gene 3233753 3234814 . - . ID=gene2872;Name=YPSIP31758_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15585;old_locus_tag=YpsIP31758_2865 NC_009708.1 Protein Homology CDS 3233753 3234814 . - 0 ID=cds2790;Parent=gene2872;Dbxref=Genbank:WP_002210741.1;Name=WP_002210741.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002210741.1;transl_table=11 NC_009708.1 RefSeq gene 3234891 3235133 . + . ID=gene2873;Name=YPSIP31758_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15590 NC_009708.1 Protein Homology CDS 3234891 3235133 . + 0 ID=cds2791;Parent=gene2873;Dbxref=Genbank:WP_041175782.1;Name=WP_041175782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175782.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3235113 3236166 . + . ID=id246;gbkey=repeat_region NC_009708.1 RefSeq gene 3235350 3235419 . - . ID=gene2874;Name=YPSIP31758_RS15595;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15595;old_locus_tag=YpsIP31758_4247 NC_009708.1 tRNAscan-SE tRNA 3235350 3235419 . - . ID=rna77;Parent=gene2874;anticodon=(pos:complement(3235385..3235387));gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 3235350 3235419 . - . ID=id247;Parent=rna77;anticodon=(pos:complement(3235385..3235387));gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq gene 3235517 3235586 . - . ID=gene2875;Name=YPSIP31758_RS15600;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15600;old_locus_tag=YpsIP31758_4248 NC_009708.1 tRNAscan-SE tRNA 3235517 3235586 . - . ID=rna78;Parent=gene2875;anticodon=(pos:complement(3235552..3235554));gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 3235517 3235586 . - . ID=id248;Parent=rna78;anticodon=(pos:complement(3235552..3235554));gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq gene 3235782 3235857 . - . ID=gene2876;Name=YPSIP31758_RS15605;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15605;old_locus_tag=YpsIP31758_4250 NC_009708.1 tRNAscan-SE tRNA 3235782 3235857 . - . ID=rna79;Parent=gene2876;anticodon=(pos:complement(3235822..3235824));gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 3235782 3235857 . - . ID=id249;Parent=rna79;anticodon=(pos:complement(3235822..3235824));gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq gene 3235885 3235960 . - . ID=gene2877;Name=YPSIP31758_RS15610;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15610;old_locus_tag=YpsIP31758_4251 NC_009708.1 tRNAscan-SE tRNA 3235885 3235960 . - . ID=rna80;Parent=gene2877;anticodon=(pos:complement(3235925..3235927));gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 3235885 3235960 . - . ID=id250;Parent=rna80;anticodon=(pos:complement(3235925..3235927));gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq gene 3235988 3236063 . - . ID=gene2878;Name=YPSIP31758_RS15615;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15615;old_locus_tag=YpsIP31758_4252 NC_009708.1 tRNAscan-SE tRNA 3235988 3236063 . - . ID=rna81;Parent=gene2878;anticodon=(pos:complement(3236028..3236030));gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 3235988 3236063 . - . ID=id251;Parent=rna81;anticodon=(pos:complement(3236028..3236030));gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq gene 3236091 3236166 . - . ID=gene2879;Name=YPSIP31758_RS15620;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15620;old_locus_tag=YpsIP31758_4253 NC_009708.1 tRNAscan-SE tRNA 3236091 3236166 . - . ID=rna82;Parent=gene2879;anticodon=(pos:complement(3236131..3236133));gbkey=tRNA;product=tRNA-Lys NC_009708.1 tRNAscan-SE exon 3236091 3236166 . - . ID=id252;Parent=rna82;anticodon=(pos:complement(3236131..3236133));gbkey=tRNA;product=tRNA-Lys NC_009708.1 RefSeq gene 3236357 3237166 . - . ID=gene2880;Name=YPSIP31758_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15625;old_locus_tag=YpsIP31758_2866 NC_009708.1 Protein Homology CDS 3236357 3237166 . - 0 ID=cds2792;Parent=gene2880;Dbxref=Genbank:WP_002220051.1;Name=WP_002220051.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=WP_002220051.1;transl_table=11 NC_009708.1 RefSeq gene 3237176 3237682 . - . ID=gene2881;Name=YPSIP31758_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15630;old_locus_tag=YpsIP31758_2867 NC_009708.1 Protein Homology CDS 3237176 3237682 . - 0 ID=cds2793;Parent=gene2881;Dbxref=Genbank:WP_011191946.1;Name=WP_011191946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191946.1;transl_table=11 NC_009708.1 RefSeq gene 3237733 3239025 . - . ID=gene2882;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15635;old_locus_tag=YpsIP31758_2868 NC_009708.1 Protein Homology CDS 3237733 3239025 . - 0 ID=cds2794;Parent=gene2882;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11 NC_009708.1 RefSeq gene 3239145 3240311 . - . ID=gene2883;Name=YPSIP31758_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15640;old_locus_tag=YpsIP31758_2869 NC_009708.1 Protein Homology CDS 3239145 3240311 . - 0 ID=cds2795;Parent=gene2883;Dbxref=Genbank:WP_002210737.1;Name=WP_002210737.1;gbkey=CDS;product=cell envelope integrity/translocation protein TolA;protein_id=WP_002210737.1;transl_table=11 NC_009708.1 RefSeq gene 3240423 3240851 . - . ID=gene2884;Name=YPSIP31758_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15645;old_locus_tag=YpsIP31758_2870 NC_009708.1 Protein Homology CDS 3240423 3240851 . - 0 ID=cds2796;Parent=gene2884;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11 NC_009708.1 RefSeq gene 3240864 3241550 . - . ID=gene2885;Name=YPSIP31758_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15650;old_locus_tag=YpsIP31758_2871 NC_009708.1 Protein Homology CDS 3240864 3241550 . - 0 ID=cds2797;Parent=gene2885;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11 NC_009708.1 RefSeq gene 3241550 3241951 . - . ID=gene2886;Name=YPSIP31758_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15655;old_locus_tag=YpsIP31758_2872 NC_009708.1 Protein Homology CDS 3241550 3241951 . - 0 ID=cds2798;Parent=gene2886;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11 NC_009708.1 RefSeq gene 3242083 3242370 . - . ID=gene2887;Name=YPSIP31758_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15660;old_locus_tag=YpsIP31758_2873 NC_009708.1 Protein Homology CDS 3242083 3242370 . - 0 ID=cds2799;Parent=gene2887;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11 NC_009708.1 RefSeq gene 3242360 3242494 . - . ID=gene2888;Name=YPSIP31758_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15665;old_locus_tag=YpsIP31758_2874 NC_009708.1 Protein Homology CDS 3242360 3242494 . - 0 ID=cds2800;Parent=gene2888;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11 NC_009708.1 RefSeq gene 3242507 3243646 . - . ID=gene2889;Name=YPSIP31758_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15670;old_locus_tag=YpsIP31758_2875 NC_009708.1 Protein Homology CDS 3242507 3243646 . - 0 ID=cds2801;Parent=gene2889;Dbxref=Genbank:WP_002210731.1;Name=WP_002210731.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NC_009708.1 RefSeq gene 3243661 3245229 . - . ID=gene2890;Name=YPSIP31758_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15675;old_locus_tag=YpsIP31758_2876 NC_009708.1 Protein Homology CDS 3243661 3245229 . - 0 ID=cds2802;Parent=gene2890;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3245927 3246644 . + . ID=id253;gbkey=repeat_region NC_009708.1 RefSeq gene 3246035 3246493 . - . ID=gene2891;Name=YPSIP31758_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15680;old_locus_tag=YpsIP31758_2877 NC_009708.1 Protein Homology CDS 3246035 3246493 . - 0 ID=cds2803;Parent=gene2891;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_009708.1 RefSeq gene 3246707 3247579 . - . ID=gene2892;Name=YPSIP31758_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15685;old_locus_tag=YpsIP31758_2878 NC_009708.1 Protein Homology CDS 3246707 3247579 . - 0 ID=cds2804;Parent=gene2892;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NC_009708.1 RefSeq gene 3247579 3248745 . - . ID=gene2893;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15690;old_locus_tag=YpsIP31758_2879 NC_009708.1 Protein Homology CDS 3247579 3248745 . - 0 ID=cds2805;Parent=gene2893;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NC_009708.1 RefSeq gene 3248858 3250081 . - . ID=gene2894;Name=YPSIP31758_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15695;old_locus_tag=YpsIP31758_2880 NC_009708.1 Protein Homology CDS 3248858 3250081 . - 0 ID=cds2806;Parent=gene2894;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NC_009708.1 RefSeq gene 3250111 3252918 . - . ID=gene2895;Name=YPSIP31758_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15700;old_locus_tag=YpsIP31758_2881 NC_009708.1 Protein Homology CDS 3250111 3252918 . - 0 ID=cds2807;Parent=gene2895;Dbxref=Genbank:WP_002210726.1;Name=WP_002210726.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=WP_002210726.1;transl_table=11 NC_009708.1 RefSeq gene 3253274 3253990 . - . ID=gene2896;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15705;old_locus_tag=YpsIP31758_2882 NC_009708.1 Protein Homology CDS 3253274 3253990 . - 0 ID=cds2808;Parent=gene2896;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NC_009708.1 RefSeq gene 3254040 3255806 . - . ID=gene2897;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15710;old_locus_tag=YpsIP31758_2883 NC_009708.1 Protein Homology CDS 3254040 3255806 . - 0 ID=cds2809;Parent=gene2897;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NC_009708.1 RefSeq gene 3255807 3256154 . - . ID=gene2898;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15715;old_locus_tag=YpsIP31758_2884 NC_009708.1 Protein Homology CDS 3255807 3256154 . - 0 ID=cds2810;Parent=gene2898;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11 NC_009708.1 RefSeq gene 3256148 3256537 . - . ID=gene2899;Name=YPSIP31758_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15720;old_locus_tag=YpsIP31758_2885 NC_009708.1 Protein Homology CDS 3256148 3256537 . - 0 ID=cds2811;Parent=gene2899;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11 NC_009708.1 RefSeq gene 3257256 3258536 . + . ID=gene2900;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15725;old_locus_tag=YpsIP31758_2886 NC_009708.1 Protein Homology CDS 3257256 3258536 . + 0 ID=cds2812;Parent=gene2900;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11 NC_009708.1 RefSeq gene 3258644 3259222 . - . ID=gene2901;Name=YPSIP31758_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15730;old_locus_tag=YpsIP31758_2887 NC_009708.1 Protein Homology CDS 3258644 3259222 . - 0 ID=cds2813;Parent=gene2901;Dbxref=Genbank:WP_002224622.1;Name=WP_002224622.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002224622.1;transl_table=11 NC_009708.1 RefSeq gene 3259346 3260227 . + . ID=gene2902;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15735;old_locus_tag=YpsIP31758_2888 NC_009708.1 Protein Homology CDS 3259346 3260227 . + 0 ID=cds2814;Parent=gene2902;Dbxref=Genbank:WP_002210719.1;Name=WP_002210719.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_002210719.1;transl_table=11 NC_009708.1 RefSeq gene 3260314 3261975 . + . ID=gene2903;Name=YPSIP31758_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15740;old_locus_tag=YpsIP31758_2889 NC_009708.1 Protein Homology CDS 3260314 3261975 . + 0 ID=cds2815;Parent=gene2903;Dbxref=Genbank:WP_012105491.1;Name=WP_012105491.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_012105491.1;transl_table=11 NC_009708.1 RefSeq gene 3262089 3262430 . + . ID=gene2904;Name=YPSIP31758_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15745;old_locus_tag=YpsIP31758_2890 NC_009708.1 Protein Homology CDS 3262089 3262430 . + 0 ID=cds2816;Parent=gene2904;Dbxref=Genbank:WP_012105492.1;Name=WP_012105492.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_012105492.1;transl_table=11 NC_009708.1 RefSeq gene 3262580 3262864 . - . ID=gene2905;Name=YPSIP31758_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15750;old_locus_tag=YpsIP31758_2891 NC_009708.1 Protein Homology CDS 3262580 3262864 . - 0 ID=cds2817;Parent=gene2905;Dbxref=Genbank:WP_012105493.1;Name=WP_012105493.1;gbkey=CDS;product=protein RnfH;protein_id=WP_012105493.1;transl_table=11 NC_009708.1 RefSeq gene 3262857 3263291 . - . ID=gene2906;Name=YPSIP31758_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15755;old_locus_tag=YpsIP31758_2892 NC_009708.1 Protein Homology CDS 3262857 3263291 . - 0 ID=cds2818;Parent=gene2906;Dbxref=Genbank:WP_012105494.1;Name=WP_012105494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105494.1;transl_table=11 NC_009708.1 RefSeq gene 3263452 3263934 . + . ID=gene2907;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15760;old_locus_tag=YpsIP31758_2893 NC_009708.1 Protein Homology CDS 3263452 3263934 . + 0 ID=cds2819;Parent=gene2907;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11 NC_009708.1 RefSeq gene 3263983 3264346 . + . ID=gene2908;Name=YPSIP31758_RS22485;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22485 NC_009708.1 RefSeq transcript 3263983 3264346 . + . ID=rna83;Parent=gene2908;gbkey=misc_RNA;product=10Sa RNA (tmRNA) NC_009708.1 RefSeq exon 3263983 3264346 . + . ID=id254;Parent=rna83;gbkey=misc_RNA;product=10Sa RNA (tmRNA) NC_009708.1 RefSeq gene 3264540 3265049 . + . ID=gene2909;Name=YPSIP31758_RS15765;end_range=3265049,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS15765;old_locus_tag=YpsIP31758_2895;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 3264540 3265049 . + 0 ID=cds2820;Parent=gene2909;end_range=3265049,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=integrase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3265119 3265382 . + . ID=gene2910;Name=YPSIP31758_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15770;old_locus_tag=YpsIP31758_2896 NC_009708.1 Protein Homology CDS 3265119 3265382 . + 0 ID=cds2821;Parent=gene2910;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11 NC_009708.1 RefSeq gene 3265465 3265650 . + . ID=gene2911;Name=YPSIP31758_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15775 NC_009708.1 Protein Homology CDS 3265465 3265650 . + 0 ID=cds2822;Parent=gene2911;Dbxref=Genbank:WP_041175783.1;Name=WP_041175783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175783.1;transl_table=11 NC_009708.1 RefSeq gene 3265813 3266064 . - . ID=gene2912;Name=YPSIP31758_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15780 NC_009708.1 Protein Homology CDS 3265813 3266064 . - 0 ID=cds2823;Parent=gene2912;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NC_009708.1 RefSeq gene 3266775 3267542 . + . ID=gene2913;Name=YPSIP31758_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15785;old_locus_tag=YpsIP31758_2898 NC_009708.1 Protein Homology CDS 3266775 3267542 . + 0 ID=cds2824;Parent=gene2913;Dbxref=Genbank:WP_012105497.1;Name=WP_012105497.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_012105497.1;transl_table=11 NC_009708.1 RefSeq gene 3267694 3267819 . - . ID=gene2914;Name=YPSIP31758_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15790 NC_009708.1 Protein Homology CDS 3267694 3267819 . - 0 ID=cds2825;Parent=gene2914;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11 NC_009708.1 RefSeq gene 3267874 3268161 . + . ID=gene2915;Name=YPSIP31758_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15795;old_locus_tag=YpsIP31758_2899 NC_009708.1 Protein Homology CDS 3267874 3268161 . + 0 ID=cds2826;Parent=gene2915;Dbxref=Genbank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NC_009708.1 RefSeq gene 3268321 3268542 . + . ID=gene2916;Name=YPSIP31758_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15800;old_locus_tag=YpsIP31758_2900 NC_009708.1 Protein Homology CDS 3268321 3268542 . + 0 ID=cds2827;Parent=gene2916;Dbxref=Genbank:WP_041175784.1;Name=WP_041175784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175784.1;transl_table=11 NC_009708.1 RefSeq gene 3268615 3269142 . + . ID=gene2917;Name=YPSIP31758_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15805;old_locus_tag=YpsIP31758_2901 NC_009708.1 Protein Homology CDS 3268615 3269142 . + 0 ID=cds2828;Parent=gene2917;Dbxref=Genbank:WP_002215386.1;Name=WP_002215386.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002215386.1;transl_table=11 NC_009708.1 RefSeq gene 3269509 3269955 . + . ID=gene2918;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15810;old_locus_tag=YpsIP31758_2902 NC_009708.1 Protein Homology CDS 3269509 3269955 . + 0 ID=cds2829;Parent=gene2918;Dbxref=Genbank:WP_011191941.1;Name=WP_011191941.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=WP_011191941.1;transl_table=11 NC_009708.1 RefSeq gene 3270396 3273071 . - . ID=gene2919;Name=YPSIP31758_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15815;old_locus_tag=YpsIP31758_2903 NC_009708.1 Protein Homology CDS 3270396 3273071 . - 0 ID=cds2830;Parent=gene2919;Dbxref=Genbank:WP_011191940.1;Name=WP_011191940.1;gbkey=CDS;product=beta-N-acetylhexosaminidase;protein_id=WP_011191940.1;transl_table=11 NC_009708.1 RefSeq gene 3273399 3274820 . - . ID=gene2920;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15820;old_locus_tag=YpsIP31758_2905 NC_009708.1 Protein Homology CDS 3273399 3274820 . - 0 ID=cds2831;Parent=gene2920;Dbxref=Genbank:WP_012105499.1;Name=WP_012105499.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=porin;protein_id=WP_012105499.1;transl_table=11 NC_009708.1 RefSeq gene 3275542 3277209 . - . ID=gene2921;Name=YPSIP31758_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15825;old_locus_tag=YpsIP31758_2907 NC_009708.1 Protein Homology CDS 3275542 3277209 . - 0 ID=cds2832;Parent=gene2921;Dbxref=Genbank:WP_002210354.1;Name=WP_002210354.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NC_009708.1 RefSeq gene 3277424 3279457 . - . ID=gene2922;Name=YPSIP31758_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15830;old_locus_tag=YpsIP31758_2908 NC_009708.1 Protein Homology CDS 3277424 3279457 . - 0 ID=cds2833;Parent=gene2922;Dbxref=Genbank:WP_012105501.1;Name=WP_012105501.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetylglucosamine transporter subunit IIABC;protein_id=WP_012105501.1;transl_table=11 NC_009708.1 RefSeq gene 3279856 3280656 . + . ID=gene2923;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15835;old_locus_tag=YpsIP31758_2909 NC_009708.1 Protein Homology CDS 3279856 3280656 . + 0 ID=cds2834;Parent=gene2923;Dbxref=Genbank:WP_012105502.1;Name=WP_012105502.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_012105502.1;transl_table=11 NC_009708.1 RefSeq gene 3280676 3281821 . + . ID=gene2924;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15840;old_locus_tag=YpsIP31758_2910 NC_009708.1 Protein Homology CDS 3280676 3281821 . + 0 ID=cds2835;Parent=gene2924;Dbxref=Genbank:WP_012105503.1;Name=WP_012105503.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_012105503.1;transl_table=11 NC_009708.1 RefSeq gene 3281838 3283064 . + . ID=gene2925;Name=YPSIP31758_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15845;old_locus_tag=YpsIP31758_2911 NC_009708.1 Protein Homology CDS 3281838 3283064 . + 0 ID=cds2836;Parent=gene2925;Dbxref=Genbank:WP_002224863.1;Name=WP_002224863.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002224863.1;transl_table=11 NC_009708.1 RefSeq gene 3283137 3283889 . + . ID=gene2926;Name=YPSIP31758_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15850;old_locus_tag=YpsIP31758_2912 NC_009708.1 Protein Homology CDS 3283137 3283889 . + 0 ID=cds2837;Parent=gene2926;Dbxref=Genbank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_002210349.1;transl_table=11 NC_009708.1 RefSeq gene 3284244 3285908 . + . ID=gene2927;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15855;old_locus_tag=YpsIP31758_2913 NC_009708.1 Protein Homology CDS 3284244 3285908 . + 0 ID=cds2838;Parent=gene2927;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11 NC_009708.1 RefSeq gene 3285957 3286094 . - . ID=gene2928;Name=YPSIP31758_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15860 NC_009708.1 Protein Homology CDS 3285957 3286094 . - 0 ID=cds2839;Parent=gene2928;Dbxref=Genbank:WP_002222587.1;Name=WP_002222587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222587.1;transl_table=11 NC_009708.1 RefSeq gene 3286366 3286442 . + . ID=gene2929;Name=YPSIP31758_RS15865;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15865;old_locus_tag=YpsIP31758_4255 NC_009708.1 tRNAscan-SE tRNA 3286366 3286442 . + . ID=rna84;Parent=gene2929;anticodon=(pos:3286400..3286402);gbkey=tRNA;product=tRNA-Met NC_009708.1 tRNAscan-SE exon 3286366 3286442 . + . ID=id255;Parent=rna84;anticodon=(pos:3286400..3286402);gbkey=tRNA;product=tRNA-Met NC_009708.1 RefSeq gene 3286450 3286534 . + . ID=gene2930;Name=YPSIP31758_RS15870;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15870;old_locus_tag=YpsIP31758_4256 NC_009708.1 tRNAscan-SE tRNA 3286450 3286534 . + . ID=rna85;Parent=gene2930;anticodon=(pos:3286484..3286486);gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 3286450 3286534 . + . ID=id256;Parent=rna85;anticodon=(pos:3286484..3286486);gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 3286564 3286638 . + . ID=gene2931;Name=YPSIP31758_RS15875;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15875;old_locus_tag=YpsIP31758_4257 NC_009708.1 tRNAscan-SE tRNA 3286564 3286638 . + . ID=rna86;Parent=gene2931;anticodon=(pos:3286596..3286598);gbkey=tRNA;product=tRNA-Gln NC_009708.1 tRNAscan-SE exon 3286564 3286638 . + . ID=id257;Parent=rna86;anticodon=(pos:3286596..3286598);gbkey=tRNA;product=tRNA-Gln NC_009708.1 RefSeq gene 3286722 3286796 . + . ID=gene2932;Name=YPSIP31758_RS15880;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15880;old_locus_tag=YpsIP31758_4258 NC_009708.1 tRNAscan-SE tRNA 3286722 3286796 . + . ID=rna87;Parent=gene2932;anticodon=(pos:3286754..3286756);gbkey=tRNA;product=tRNA-Gln NC_009708.1 tRNAscan-SE exon 3286722 3286796 . + . ID=id258;Parent=rna87;anticodon=(pos:3286754..3286756);gbkey=tRNA;product=tRNA-Gln NC_009708.1 RefSeq gene 3286829 3286905 . + . ID=gene2933;Name=YPSIP31758_RS15885;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15885;old_locus_tag=YpsIP31758_4259 NC_009708.1 tRNAscan-SE tRNA 3286829 3286905 . + . ID=rna88;Parent=gene2933;anticodon=(pos:3286863..3286865);gbkey=tRNA;product=tRNA-Met NC_009708.1 tRNAscan-SE exon 3286829 3286905 . + . ID=id259;Parent=rna88;anticodon=(pos:3286863..3286865);gbkey=tRNA;product=tRNA-Met NC_009708.1 RefSeq gene 3286911 3286985 . + . ID=gene2934;Name=YPSIP31758_RS15890;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS15890;old_locus_tag=YpsIP31758_4260 NC_009708.1 tRNAscan-SE tRNA 3286911 3286985 . + . ID=rna89;Parent=gene2934;anticodon=(pos:3286943..3286945);gbkey=tRNA;product=tRNA-Gln NC_009708.1 tRNAscan-SE exon 3286911 3286985 . + . ID=id260;Parent=rna89;anticodon=(pos:3286943..3286945);gbkey=tRNA;product=tRNA-Gln NC_009708.1 RefSeq gene 3287398 3288579 . - . ID=gene2935;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=YPSIP31758_RS15895;old_locus_tag=YpsIP31758_2914 NC_009708.1 Protein Homology CDS 3287398 3288579 . - 0 ID=cds2840;Parent=gene2935;Dbxref=Genbank:WP_011191937.1;Name=WP_011191937.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_011191937.1;transl_table=11 NC_009708.1 RefSeq gene 3288821 3290245 . + . ID=gene2936;Name=YPSIP31758_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15900;old_locus_tag=YpsIP31758_2915 NC_009708.1 Protein Homology CDS 3288821 3290245 . + 0 ID=cds2841;Parent=gene2936;Dbxref=Genbank:WP_011191936.1;Name=WP_011191936.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_011191936.1;transl_table=11 NC_009708.1 RefSeq gene 3290590 3291645 . + . ID=gene2937;Name=YPSIP31758_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15905;old_locus_tag=YpsIP31758_2916 NC_009708.1 Protein Homology CDS 3290590 3291645 . + 0 ID=cds2842;Parent=gene2937;Dbxref=Genbank:WP_002354474.1;Name=WP_002354474.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_002354474.1;transl_table=11 NC_009708.1 RefSeq gene 3291642 3292115 . + . ID=gene2938;Name=YPSIP31758_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15910;old_locus_tag=YpsIP31758_2917 NC_009708.1 Protein Homology CDS 3291642 3292115 . + 0 ID=cds2843;Parent=gene2938;Dbxref=Genbank:WP_011191934.1;Name=WP_011191934.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_011191934.1;transl_table=11 NC_009708.1 RefSeq gene 3292233 3293111 . + . ID=gene2939;Name=YPSIP31758_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15915;old_locus_tag=YpsIP31758_2918 NC_009708.1 Protein Homology CDS 3292233 3293111 . + 0 ID=cds2844;Parent=gene2939;Dbxref=Genbank:WP_002210342.1;Name=WP_002210342.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_002210342.1;transl_table=11 NC_009708.1 RefSeq gene 3293119 3294666 . + . ID=gene2940;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15920;old_locus_tag=YpsIP31758_2919 NC_009708.1 Protein Homology CDS 3293119 3294666 . + 0 ID=cds2845;Parent=gene2940;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NC_009708.1 RefSeq gene 3295463 3296380 . + . ID=gene2941;Name=YPSIP31758_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15925;old_locus_tag=YpsIP31758_2920 NC_009708.1 Protein Homology CDS 3295463 3296380 . + 0 ID=cds2846;Parent=gene2941;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11 NC_009708.1 RefSeq gene 3296554 3297294 . + . ID=gene2942;Name=YPSIP31758_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15930;old_locus_tag=YpsIP31758_2921 NC_009708.1 Protein Homology CDS 3296554 3297294 . + 0 ID=cds2847;Parent=gene2942;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11 NC_009708.1 RefSeq gene 3297294 3297968 . + . ID=gene2943;Name=YPSIP31758_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15935;old_locus_tag=YpsIP31758_2922 NC_009708.1 Protein Homology CDS 3297294 3297968 . + 0 ID=cds2848;Parent=gene2943;Dbxref=Genbank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;product=glutamate/aspartate transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NC_009708.1 RefSeq gene 3297968 3298693 . + . ID=gene2944;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15940;old_locus_tag=YpsIP31758_2923 NC_009708.1 Protein Homology CDS 3297968 3298693 . + 0 ID=cds2849;Parent=gene2944;Dbxref=Genbank:WP_002210336.1;Name=WP_002210336.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NC_009708.1 RefSeq gene 3298827 3299309 . - . ID=gene2945;Name=YPSIP31758_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15945;old_locus_tag=YpsIP31758_2924 NC_009708.1 Protein Homology CDS 3298827 3299309 . - 0 ID=cds2850;Parent=gene2945;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11 NC_009708.1 RefSeq gene 3299571 3302153 . + . ID=gene2946;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15950;old_locus_tag=YpsIP31758_2926 NC_009708.1 Protein Homology CDS 3299571 3302153 . + 0 ID=cds2851;Parent=gene2946;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NC_009708.1 RefSeq gene 3302168 3302791 . + . ID=gene2947;Name=YPSIP31758_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15955;old_locus_tag=YpsIP31758_2927 NC_009708.1 Protein Homology CDS 3302168 3302791 . + 0 ID=cds2852;Parent=gene2947;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11 NC_009708.1 RefSeq gene 3302788 3303822 . + . ID=gene2948;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15960;old_locus_tag=YpsIP31758_2928 NC_009708.1 Protein Homology CDS 3302788 3303822 . + 0 ID=cds2853;Parent=gene2948;Dbxref=Genbank:WP_002210331.1;Name=WP_002210331.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_002210331.1;transl_table=11 NC_009708.1 RefSeq gene 3303812 3304474 . + . ID=gene2949;Name=YPSIP31758_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15965;old_locus_tag=YpsIP31758_2929 NC_009708.1 Protein Homology CDS 3303812 3304474 . + 0 ID=cds2854;Parent=gene2949;Dbxref=Genbank:WP_002210330.1;Name=WP_002210330.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NC_009708.1 RefSeq gene 3304940 3306721 . - . ID=gene2950;Name=YPSIP31758_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15970;old_locus_tag=YpsIP31758_2930 NC_009708.1 Protein Homology CDS 3304940 3306721 . - 0 ID=cds2855;Parent=gene2950;Dbxref=Genbank:WP_012105506.1;Name=WP_012105506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105506.1;transl_table=11 NC_009708.1 RefSeq gene 3306714 3306935 . - . ID=gene2951;Name=YPSIP31758_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15975 NC_009708.1 GeneMarkS+ CDS 3306714 3306935 . - 0 ID=cds2856;Parent=gene2951;Dbxref=Genbank:WP_012303831.1;Name=WP_012303831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303831.1;transl_table=11 NC_009708.1 RefSeq gene 3306939 3308798 . - . ID=gene2952;Name=YPSIP31758_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15980;old_locus_tag=YpsIP31758_2931 NC_009708.1 Protein Homology CDS 3306939 3308798 . - 0 ID=cds2857;Parent=gene2952;Dbxref=Genbank:WP_012105507.1;Name=WP_012105507.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105507.1;transl_table=11 NC_009708.1 RefSeq gene 3308807 3309634 . - . ID=gene2953;Name=YPSIP31758_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15985;old_locus_tag=YpsIP31758_2932 NC_009708.1 Protein Homology CDS 3308807 3309634 . - 0 ID=cds2858;Parent=gene2953;Dbxref=Genbank:WP_012105508.1;Name=WP_012105508.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105508.1;transl_table=11 NC_009708.1 RefSeq gene 3309687 3310886 . - . ID=gene2954;Name=YPSIP31758_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15990;old_locus_tag=YpsIP31758_2933 NC_009708.1 Protein Homology CDS 3309687 3310886 . - 0 ID=cds2859;Parent=gene2954;Dbxref=Genbank:WP_012105509.1;Name=WP_012105509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105509.1;transl_table=11 NC_009708.1 RefSeq gene 3310870 3311229 . - . ID=gene2955;Name=YPSIP31758_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS15995;old_locus_tag=YpsIP31758_2934 NC_009708.1 Protein Homology CDS 3310870 3311229 . - 0 ID=cds2860;Parent=gene2955;Dbxref=Genbank:WP_012105510.1;Name=WP_012105510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105510.1;transl_table=11 NC_009708.1 RefSeq gene 3311226 3311903 . - . ID=gene2956;Name=YPSIP31758_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16000;old_locus_tag=YpsIP31758_2935 NC_009708.1 Protein Homology CDS 3311226 3311903 . - 0 ID=cds2861;Parent=gene2956;Dbxref=Genbank:WP_012105511.1;Name=WP_012105511.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105511.1;transl_table=11 NC_009708.1 RefSeq gene 3311885 3312724 . - . ID=gene2957;Name=YPSIP31758_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16005;old_locus_tag=YpsIP31758_2936 NC_009708.1 Protein Homology CDS 3311885 3312724 . - 0 ID=cds2862;Parent=gene2957;Dbxref=Genbank:WP_012105512.1;Name=WP_012105512.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105512.1;transl_table=11 NC_009708.1 RefSeq gene 3312728 3313030 . - . ID=gene2958;Name=YPSIP31758_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16010;old_locus_tag=YpsIP31758_2937 NC_009708.1 Protein Homology CDS 3312728 3313030 . - 0 ID=cds2863;Parent=gene2958;Dbxref=Genbank:WP_012105513.1;Name=WP_012105513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105513.1;transl_table=11 NC_009708.1 RefSeq gene 3313032 3313556 . - . ID=gene2959;Name=YPSIP31758_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16015;old_locus_tag=YpsIP31758_2938 NC_009708.1 Protein Homology CDS 3313032 3313556 . - 0 ID=cds2864;Parent=gene2959;Dbxref=Genbank:WP_012105514.1;Name=WP_012105514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105514.1;transl_table=11 NC_009708.1 RefSeq gene 3313556 3314104 . - . ID=gene2960;Name=YPSIP31758_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16020;old_locus_tag=YpsIP31758_2939 NC_009708.1 Protein Homology CDS 3313556 3314104 . - 0 ID=cds2865;Parent=gene2960;Dbxref=Genbank:WP_012105515.1;Name=WP_012105515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105515.1;transl_table=11 NC_009708.1 RefSeq gene 3314169 3314840 . - . ID=gene2961;Name=YPSIP31758_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16025 NC_009708.1 Protein Homology CDS 3314169 3314840 . - 0 ID=cds2866;Parent=gene2961;Dbxref=Genbank:WP_012105516.1;Name=WP_012105516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105516.1;transl_table=11 NC_009708.1 RefSeq gene 3314833 3315627 . - . ID=gene2962;Name=YPSIP31758_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16030;old_locus_tag=YpsIP31758_2941 NC_009708.1 Protein Homology CDS 3314833 3315627 . - 0 ID=cds2867;Parent=gene2962;Dbxref=Genbank:WP_012105517.1;Name=WP_012105517.1;gbkey=CDS;product=head morphogenesis protein SPP1 gp7;protein_id=WP_012105517.1;transl_table=11 NC_009708.1 RefSeq gene 3315581 3316189 . - . ID=gene2963;Name=YPSIP31758_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16035;old_locus_tag=YpsIP31758_2942 NC_009708.1 Protein Homology CDS 3315581 3316189 . - 0 ID=cds2868;Parent=gene2963;Dbxref=Genbank:WP_012105518.1;Name=WP_012105518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105518.1;transl_table=11 NC_009708.1 RefSeq gene 3316186 3316491 . - . ID=gene2964;Name=YPSIP31758_RS16040;end_range=3316491,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS16040;old_locus_tag=YpsIP31758_2943;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 3316186 3316491 . - 0 ID=cds2869;Parent=gene2964;end_range=3316491,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3316570 3317088 . - . ID=gene2965;Name=YPSIP31758_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16045;old_locus_tag=YpsIP31758_2944 NC_009708.1 Protein Homology CDS 3316570 3317088 . - 0 ID=cds2870;Parent=gene2965;Dbxref=Genbank:WP_012105520.1;Name=WP_012105520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105520.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3316873 3316991 . + . ID=id261;gbkey=repeat_region NC_009708.1 RefSeq gene 3317348 3317530 . - . ID=gene2966;Name=YPSIP31758_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16050 NC_009708.1 GeneMarkS+ CDS 3317348 3317530 . - 0 ID=cds2871;Parent=gene2966;Dbxref=Genbank:WP_041175785.1;Name=WP_041175785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175785.1;transl_table=11 NC_009708.1 RefSeq gene 3317622 3317810 . - . ID=gene2967;Name=YPSIP31758_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16055;old_locus_tag=YpsIP31758_2945 NC_009708.1 GeneMarkS+ CDS 3317622 3317810 . - 0 ID=cds2872;Parent=gene2967;Dbxref=Genbank:WP_012105521.1;Name=WP_012105521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105521.1;transl_table=11 NC_009708.1 RefSeq gene 3317905 3318843 . + . ID=gene2968;Name=YPSIP31758_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16060;old_locus_tag=YpsIP31758_2946 NC_009708.1 Protein Homology CDS 3317905 3318843 . + 0 ID=cds2873;Parent=gene2968;Dbxref=Genbank:WP_012105522.1;Name=WP_012105522.1;gbkey=CDS;product=integrase;protein_id=WP_012105522.1;transl_table=11 NC_009708.1 RefSeq gene 3318918 3319235 . + . ID=gene2969;Name=YPSIP31758_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16065;old_locus_tag=YpsIP31758_2947 NC_009708.1 Protein Homology CDS 3318918 3319235 . + 0 ID=cds2874;Parent=gene2969;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11 NC_009708.1 RefSeq gene 3319239 3319709 . + . ID=gene2970;Name=YPSIP31758_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16070;old_locus_tag=YpsIP31758_2948 NC_009708.1 Protein Homology CDS 3319239 3319709 . + 0 ID=cds2875;Parent=gene2970;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11 NC_009708.1 RefSeq gene 3319791 3321686 . + . ID=gene2971;Name=YPSIP31758_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16075;old_locus_tag=YpsIP31758_2949 NC_009708.1 Protein Homology CDS 3319791 3321686 . + 0 ID=cds2876;Parent=gene2971;Dbxref=Genbank:WP_012105523.1;Name=WP_012105523.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_012105523.1;transl_table=11 NC_009708.1 RefSeq gene 3321899 3323011 . + . ID=gene2972;Name=YPSIP31758_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16080;old_locus_tag=YpsIP31758_2950 NC_009708.1 Protein Homology CDS 3321899 3323011 . + 0 ID=cds2877;Parent=gene2972;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11 NC_009708.1 RefSeq gene 3323021 3324103 . + . ID=gene2973;Name=YPSIP31758_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16085;old_locus_tag=YpsIP31758_2951 NC_009708.1 Protein Homology CDS 3323021 3324103 . + 0 ID=cds2878;Parent=gene2973;Dbxref=Genbank:WP_002210324.1;Name=WP_002210324.1;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210324.1;transl_table=11 NC_009708.1 RefSeq gene 3324506 3325708 . + . ID=gene2974;Name=YPSIP31758_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16090;old_locus_tag=YpsIP31758_2952 NC_009708.1 Protein Homology CDS 3324506 3325708 . + 0 ID=cds2879;Parent=gene2974;Dbxref=Genbank:WP_011191931.1;Name=WP_011191931.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_011191931.1;transl_table=11 NC_009708.1 RefSeq gene 3325906 3326169 . + . ID=gene2975;Name=YPSIP31758_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16095;old_locus_tag=YpsIP31758_2953 NC_009708.1 Protein Homology CDS 3325906 3326169 . + 0 ID=cds2880;Parent=gene2975;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11 NC_009708.1 RefSeq gene 3326381 3327082 . + . ID=gene2976;Name=YPSIP31758_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16100;old_locus_tag=YpsIP31758_2954 NC_009708.1 Protein Homology CDS 3326381 3327082 . + 0 ID=cds2881;Parent=gene2976;Dbxref=Genbank:WP_012105524.1;Name=WP_012105524.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_012105524.1;transl_table=11 NC_009708.1 RefSeq gene 3327275 3328240 . + . ID=gene2977;Name=YPSIP31758_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16105;old_locus_tag=YpsIP31758_2955 NC_009708.1 Protein Homology CDS 3327275 3328240 . + 0 ID=cds2882;Parent=gene2977;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NC_009708.1 RefSeq gene 3328421 3328678 . - . ID=gene2978;Name=YPSIP31758_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16110;old_locus_tag=YpsIP31758_2956 NC_009708.1 Protein Homology CDS 3328421 3328678 . - 0 ID=cds2883;Parent=gene2978;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11 NC_009708.1 RefSeq gene 3328750 3328902 . - . ID=gene2979;Name=YPSIP31758_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16115 NC_009708.1 Protein Homology CDS 3328750 3328902 . - 0 ID=cds2884;Parent=gene2979;Dbxref=Genbank:WP_038400112.1;Name=WP_038400112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400112.1;transl_table=11 NC_009708.1 RefSeq gene 3329262 3329645 . + . ID=gene2980;Name=YPSIP31758_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16120;old_locus_tag=YpsIP31758_2957 NC_009708.1 Protein Homology CDS 3329262 3329645 . + 0 ID=cds2885;Parent=gene2980;Dbxref=Genbank:WP_012105525.1;Name=WP_012105525.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_012105525.1;transl_table=11 NC_009708.1 cmsearch region 3330022 3330450 . - . ID=id262;Note=cspA;gbkey=misc_feature NC_009708.1 RefSeq gene 3330068 3330277 . - . ID=gene2981;Name=YPSIP31758_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16125;old_locus_tag=YpsIP31758_2958 NC_009708.1 Protein Homology CDS 3330068 3330277 . - 0 ID=cds2886;Parent=gene2981;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11 NC_009708.1 RefSeq gene 3330556 3331035 . + . ID=gene2982;Name=YPSIP31758_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16130;old_locus_tag=YpsIP31758_2959 NC_009708.1 Protein Homology CDS 3330556 3331035 . + 0 ID=cds2887;Parent=gene2982;Dbxref=Genbank:WP_012304395.1;Name=WP_012304395.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012304395.1;transl_table=11 NC_009708.1 RefSeq gene 3331325 3331915 . - . ID=gene2983;Name=YPSIP31758_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16135;old_locus_tag=YpsIP31758_2960 NC_009708.1 Protein Homology CDS 3331325 3331915 . - 0 ID=cds2888;Parent=gene2983;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NC_009708.1 RefSeq gene 3332365 3333330 . + . ID=gene2984;Name=YPSIP31758_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16140;old_locus_tag=YpsIP31758_2961 NC_009708.1 Protein Homology CDS 3332365 3333330 . + 0 ID=cds2889;Parent=gene2984;Dbxref=Genbank:WP_011191928.1;Name=WP_011191928.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191928.1;transl_table=11 NC_009708.1 RefSeq gene 3333512 3333692 . + . ID=gene2985;Name=YPSIP31758_RS16145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS16145;pseudo=true NC_009708.1 Protein Homology CDS 3333512 3333692 . + 0 ID=cds2890;Parent=gene2985;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3333710 3333904 . - . ID=gene2986;Name=YPSIP31758_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16150;old_locus_tag=YpsIP31758_2963 NC_009708.1 Protein Homology CDS 3333710 3333904 . - 0 ID=cds2891;Parent=gene2986;Dbxref=Genbank:WP_012105528.1;Name=WP_012105528.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_012105528.1;transl_table=11 NC_009708.1 RefSeq gene 3334347 3334634 . + . ID=gene2987;Name=YPSIP31758_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16155;old_locus_tag=YpsIP31758_2964 NC_009708.1 Protein Homology CDS 3334347 3334634 . + 0 ID=cds2892;Parent=gene2987;Dbxref=Genbank:WP_002210309.1;Name=WP_002210309.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002210309.1;transl_table=11 NC_009708.1 RefSeq gene 3334650 3336440 . - . ID=gene2988;Name=YPSIP31758_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16160;old_locus_tag=YpsIP31758_2965 NC_009708.1 Protein Homology CDS 3334650 3336440 . - 0 ID=cds2893;Parent=gene2988;Dbxref=Genbank:WP_012105529.1;Name=WP_012105529.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_012105529.1;transl_table=11 NC_009708.1 RefSeq gene 3336648 3336851 . - . ID=gene2989;Name=YPSIP31758_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16165 NC_009708.1 Protein Homology CDS 3336648 3336851 . - 0 ID=cds2894;Parent=gene2989;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11 NC_009708.1 RefSeq gene 3337010 3337825 . - . ID=gene2990;Name=YPSIP31758_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16170;old_locus_tag=YpsIP31758_2967 NC_009708.1 Protein Homology CDS 3337010 3337825 . - 0 ID=cds2895;Parent=gene2990;Dbxref=Genbank:WP_011191925.1;Name=WP_011191925.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_011191925.1;transl_table=11 NC_009708.1 RefSeq gene 3337835 3338755 . - . ID=gene2991;Name=YPSIP31758_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16175;old_locus_tag=YpsIP31758_2968 NC_009708.1 Protein Homology CDS 3337835 3338755 . - 0 ID=cds2896;Parent=gene2991;Dbxref=Genbank:WP_002227877.1;Name=WP_002227877.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_002227877.1;transl_table=11 NC_009708.1 RefSeq gene 3338854 3340731 . - . ID=gene2992;Name=YPSIP31758_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16180;old_locus_tag=YpsIP31758_2969 NC_009708.1 Protein Homology CDS 3338854 3340731 . - 0 ID=cds2897;Parent=gene2992;Dbxref=Genbank:WP_041175492.1;Name=WP_041175492.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_041175492.1;transl_table=11 NC_009708.1 RefSeq gene 3340873 3342006 . - . ID=gene2993;Name=YPSIP31758_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16185;old_locus_tag=YpsIP31758_2970 NC_009708.1 Protein Homology CDS 3340873 3342006 . - 0 ID=cds2898;Parent=gene2993;Dbxref=Genbank:WP_012105531.1;Name=WP_012105531.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_012105531.1;transl_table=11 NC_009708.1 RefSeq gene 3342030 3343058 . - . ID=gene2994;Name=YPSIP31758_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16190;old_locus_tag=YpsIP31758_2971 NC_009708.1 Protein Homology CDS 3342030 3343058 . - 0 ID=cds2899;Parent=gene2994;Dbxref=Genbank:WP_002210302.1;Name=WP_002210302.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NC_009708.1 RefSeq gene 3343070 3344617 . - . ID=gene2995;Name=YPSIP31758_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16195;old_locus_tag=YpsIP31758_2972 NC_009708.1 Protein Homology CDS 3343070 3344617 . - 0 ID=cds2900;Parent=gene2995;Dbxref=Genbank:WP_012105532.1;Name=WP_012105532.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_012105532.1;transl_table=11 NC_009708.1 RefSeq gene 3344666 3345595 . - . ID=gene2996;Name=YPSIP31758_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16200;old_locus_tag=YpsIP31758_2973 NC_009708.1 Protein Homology CDS 3344666 3345595 . - 0 ID=cds2901;Parent=gene2996;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11 NC_009708.1 RefSeq gene 3345685 3346671 . - . ID=gene2997;Name=YPSIP31758_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16205;old_locus_tag=YpsIP31758_2974 NC_009708.1 Protein Homology CDS 3345685 3346671 . - 0 ID=cds2902;Parent=gene2997;Dbxref=Genbank:WP_012105533.1;Name=WP_012105533.1;gbkey=CDS;product=inositol 2-dehydrogenase;protein_id=WP_012105533.1;transl_table=11 NC_009708.1 RefSeq gene 3346965 3348890 . - . ID=gene2998;Name=YPSIP31758_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16210;old_locus_tag=YpsIP31758_2976 NC_009708.1 Protein Homology CDS 3346965 3348890 . - 0 ID=cds2903;Parent=gene2998;Dbxref=Genbank:WP_041175886.1;Name=WP_041175886.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_041175886.1;transl_table=11 NC_009708.1 RefSeq gene 3348925 3350451 . - . ID=gene2999;Name=YPSIP31758_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16215;old_locus_tag=YpsIP31758_2977 NC_009708.1 Protein Homology CDS 3348925 3350451 . - 0 ID=cds2904;Parent=gene2999;Dbxref=Genbank:WP_011191918.1;Name=WP_011191918.1;gbkey=CDS;product=methylmalonate-semialdehyde dehydrogenase;protein_id=WP_011191918.1;transl_table=11 NC_009708.1 RefSeq gene 3350778 3351632 . + . ID=gene3000;Name=YPSIP31758_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16220;old_locus_tag=YpsIP31758_2978 NC_009708.1 Protein Homology CDS 3350778 3351632 . + 0 ID=cds2905;Parent=gene3000;Dbxref=Genbank:WP_012105536.1;Name=WP_012105536.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_012105536.1;transl_table=11 NC_009708.1 RefSeq gene 3352172 3358168 . + . ID=gene3001;Name=YPSIP31758_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16225;old_locus_tag=YpsIP31758_2979 NC_009708.1 Protein Homology CDS 3352172 3358168 . + 0 ID=cds2906;Parent=gene3001;Dbxref=Genbank:WP_012105537.1;Name=WP_012105537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105537.1;transl_table=11 NC_009708.1 RefSeq gene 3358225 3360588 . + . ID=gene3002;Name=YPSIP31758_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16230;old_locus_tag=YpsIP31758_2980 NC_009708.1 Protein Homology CDS 3358225 3360588 . + 0 ID=cds2907;Parent=gene3002;Dbxref=Genbank:WP_002223314.1;Name=WP_002223314.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_002223314.1;transl_table=11 NC_009708.1 RefSeq gene 3360801 3361046 . - . ID=gene3003;Name=YPSIP31758_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16235;old_locus_tag=YpsIP31758_2981 NC_009708.1 Protein Homology CDS 3360801 3361046 . - 0 ID=cds2908;Parent=gene3003;Dbxref=Genbank:WP_002209745.1;Name=WP_002209745.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002209745.1;transl_table=11 NC_009708.1 RefSeq gene 3361719 3362294 . + . ID=gene3004;Name=YPSIP31758_RS16240;end_range=3362294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS16240;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 3361719 3362294 . + 0 ID=cds2909;Parent=gene3004;end_range=3362294,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3362575 3362976 . + . ID=gene3005;Name=YPSIP31758_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16245 NC_009708.1 Protein Homology CDS 3362575 3362976 . + 0 ID=cds2910;Parent=gene3005;Dbxref=Genbank:WP_032467032.1;Name=WP_032467032.1;gbkey=CDS;product=membrane protein;protein_id=WP_032467032.1;transl_table=11 NC_009708.1 RefSeq gene 3363081 3363560 . - . ID=gene3006;Name=YPSIP31758_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16250;old_locus_tag=YpsIP31758_2983 NC_009708.1 Protein Homology CDS 3363081 3363560 . - 0 ID=cds2911;Parent=gene3006;Dbxref=Genbank:WP_011191915.1;Name=WP_011191915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191915.1;transl_table=11 NC_009708.1 RefSeq gene 3363584 3363835 . - . ID=gene3007;Name=YPSIP31758_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16255;old_locus_tag=YpsIP31758_2984 NC_009708.1 Protein Homology CDS 3363584 3363835 . - 0 ID=cds2912;Parent=gene3007;Dbxref=Genbank:WP_012105539.1;Name=WP_012105539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105539.1;transl_table=11 NC_009708.1 RefSeq gene 3363874 3364113 . - . ID=gene3008;Name=YPSIP31758_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16260 NC_009708.1 Protein Homology CDS 3363874 3364113 . - 0 ID=cds2913;Parent=gene3008;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NC_009708.1 RefSeq gene 3364922 3366838 . + . ID=gene3009;Name=YPSIP31758_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16265;old_locus_tag=YpsIP31758_2985 NC_009708.1 Protein Homology CDS 3364922 3366838 . + 0 ID=cds2914;Parent=gene3009;Dbxref=Genbank:WP_012105540.1;Name=WP_012105540.1;gbkey=CDS;product=autotransporter;protein_id=WP_012105540.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3366862 3367035 . + . ID=id263;gbkey=repeat_region NC_009708.1 RefSeq gene 3367373 3367938 . + . ID=gene3010;Name=YPSIP31758_RS16270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS16270;pseudo=true NC_009708.1 Protein Homology CDS 3367373 3367938 . + 0 ID=cds2915;Parent=gene3010;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3367953 3369074 . - . ID=gene3011;Name=YPSIP31758_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16275;old_locus_tag=YpsIP31758_2988 NC_009708.1 Protein Homology CDS 3367953 3369074 . - 0 ID=cds2916;Parent=gene3011;Dbxref=Genbank:WP_012105541.1;Name=WP_012105541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105541.1;transl_table=11 NC_009708.1 RefSeq gene 3369369 3370241 . - . ID=gene3012;Name=YPSIP31758_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16280;old_locus_tag=YpsIP31758_2990 NC_009708.1 Protein Homology CDS 3369369 3370241 . - 0 ID=cds2917;Parent=gene3012;Dbxref=Genbank:WP_012105543.1;Name=WP_012105543.1;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA;gbkey=CDS;product=23S rRNA pseudouridine synthase F;protein_id=WP_012105543.1;transl_table=11 NC_009708.1 RefSeq gene 3370664 3372871 . + . ID=gene3013;Name=YPSIP31758_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16285;old_locus_tag=YpsIP31758_2992 NC_009708.1 Protein Homology CDS 3370664 3372871 . + 0 ID=cds2918;Parent=gene3013;Dbxref=Genbank:WP_012105545.1;Name=WP_012105545.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105545.1;transl_table=11 NC_009708.1 RefSeq gene 3372864 3373394 . + . ID=gene3014;Name=YPSIP31758_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16290;old_locus_tag=YpsIP31758_2993 NC_009708.1 Protein Homology CDS 3372864 3373394 . + 0 ID=cds2919;Parent=gene3014;Dbxref=Genbank:WP_011191909.1;Name=WP_011191909.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191909.1;transl_table=11 NC_009708.1 RefSeq gene 3373550 3375931 . + . ID=gene3015;Name=YPSIP31758_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16295;old_locus_tag=YpsIP31758_2994 NC_009708.1 Protein Homology CDS 3373550 3375931 . + 0 ID=cds2920;Parent=gene3015;Dbxref=Genbank:WP_012105546.1;Name=WP_012105546.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_012105546.1;transl_table=11 NC_009708.1 RefSeq gene 3376010 3377638 . - . ID=gene3016;Name=YPSIP31758_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16300;old_locus_tag=YpsIP31758_2995 NC_009708.1 Protein Homology CDS 3376010 3377638 . - 0 ID=cds2921;Parent=gene3016;Dbxref=Genbank:WP_012105547.1;Name=WP_012105547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105547.1;transl_table=11 NC_009708.1 RefSeq gene 3377655 3377798 . - . ID=gene3017;Name=YPSIP31758_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16305 NC_009708.1 Protein Homology CDS 3377655 3377798 . - 0 ID=cds2922;Parent=gene3017;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NC_009708.1 RefSeq gene 3377795 3377920 . - . ID=gene3018;Name=YPSIP31758_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16310;old_locus_tag=YpsIP31758_2997 NC_009708.1 Protein Homology CDS 3377795 3377920 . - 0 ID=cds2923;Parent=gene3018;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NC_009708.1 RefSeq gene 3378111 3378962 . + . ID=gene3019;Name=YPSIP31758_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16315;old_locus_tag=YpsIP31758_2998 NC_009708.1 Protein Homology CDS 3378111 3378962 . + 0 ID=cds2924;Parent=gene3019;Dbxref=Genbank:WP_011191906.1;Name=WP_011191906.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_011191906.1;transl_table=11 NC_009708.1 RefSeq gene 3378988 3379977 . + . ID=gene3020;Name=YPSIP31758_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16320;old_locus_tag=YpsIP31758_2999 NC_009708.1 Protein Homology CDS 3378988 3379977 . + 0 ID=cds2925;Parent=gene3020;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NC_009708.1 RefSeq gene 3380032 3380925 . - . ID=gene3021;Name=YPSIP31758_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16325;old_locus_tag=YpsIP31758_3000 NC_009708.1 Protein Homology CDS 3380032 3380925 . - 0 ID=cds2926;Parent=gene3021;Dbxref=Genbank:WP_002209764.1;Name=WP_002209764.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11 NC_009708.1 RefSeq gene 3381228 3381533 . - . ID=gene3022;Name=YPSIP31758_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16330 NC_009708.1 Protein Homology CDS 3381228 3381533 . - 0 ID=cds2927;Parent=gene3022;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11 NC_009708.1 RefSeq gene 3381802 3382353 . - . ID=gene3023;Name=YPSIP31758_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16335 NC_009708.1 Protein Homology CDS 3381802 3382353 . - 0 ID=cds2928;Parent=gene3023;Dbxref=Genbank:WP_049756386.1;Name=WP_049756386.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756386.1;transl_table=11 NC_009708.1 RefSeq gene 3382647 3383051 . - . ID=gene3024;Name=YPSIP31758_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16340;old_locus_tag=YpsIP31758_3001 NC_009708.1 Protein Homology CDS 3382647 3383051 . - 0 ID=cds2929;Parent=gene3024;Dbxref=Genbank:WP_012105548.1;Name=WP_012105548.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105548.1;transl_table=11 NC_009708.1 RefSeq gene 3383033 3384352 . - . ID=gene3025;Name=YPSIP31758_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16345;old_locus_tag=YpsIP31758_3002 NC_009708.1 Protein Homology CDS 3383033 3384352 . - 0 ID=cds2930;Parent=gene3025;Dbxref=Genbank:WP_012105549.1;Name=WP_012105549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105549.1;transl_table=11 NC_009708.1 RefSeq gene 3384345 3386108 . - . ID=gene3026;Name=YPSIP31758_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16350;old_locus_tag=YpsIP31758_3003 NC_009708.1 Protein Homology CDS 3384345 3386108 . - 0 ID=cds2931;Parent=gene3026;Dbxref=Genbank:WP_002209767.1;Name=WP_002209767.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002209767.1;transl_table=11 NC_009708.1 RefSeq gene 3386105 3386737 . - . ID=gene3027;Name=YPSIP31758_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16355;old_locus_tag=YpsIP31758_3004 NC_009708.1 Protein Homology CDS 3386105 3386737 . - 0 ID=cds2932;Parent=gene3027;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11 NC_009708.1 RefSeq gene 3386747 3387676 . - . ID=gene3028;Name=YPSIP31758_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16360;old_locus_tag=YpsIP31758_3005 NC_009708.1 Protein Homology CDS 3386747 3387676 . - 0 ID=cds2933;Parent=gene3028;Dbxref=Genbank:WP_011191901.1;Name=WP_011191901.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_011191901.1;transl_table=11 NC_009708.1 RefSeq gene 3387669 3388271 . - . ID=gene3029;Name=YPSIP31758_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16365;old_locus_tag=YpsIP31758_3006 NC_009708.1 Protein Homology CDS 3387669 3388271 . - 0 ID=cds2934;Parent=gene3029;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11 NC_009708.1 RefSeq gene 3388498 3388674 . - . ID=gene3030;Name=YPSIP31758_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16370;old_locus_tag=YpsIP31758_3008 NC_009708.1 Protein Homology CDS 3388498 3388674 . - 0 ID=cds2935;Parent=gene3030;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11 NC_009708.1 RefSeq gene 3388671 3388877 . - . ID=gene3031;Name=YPSIP31758_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16375 NC_009708.1 Protein Homology CDS 3388671 3388877 . - 0 ID=cds2936;Parent=gene3031;Dbxref=Genbank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NC_009708.1 RefSeq gene 3389450 3389788 . + . ID=gene3032;Name=YPSIP31758_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16380;old_locus_tag=YpsIP31758_3010 NC_009708.1 Protein Homology CDS 3389450 3389788 . + 0 ID=cds2937;Parent=gene3032;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NC_009708.1 RefSeq gene 3389773 3390420 . + . ID=gene3033;Name=YPSIP31758_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16385;old_locus_tag=YpsIP31758_3011 NC_009708.1 Protein Homology CDS 3389773 3390420 . + 0 ID=cds2938;Parent=gene3033;Dbxref=Genbank:WP_012105552.1;Name=WP_012105552.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105552.1;transl_table=11 NC_009708.1 RefSeq gene 3390534 3390734 . + . ID=gene3034;Name=YPSIP31758_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16390 NC_009708.1 Protein Homology CDS 3390534 3390734 . + 0 ID=cds2939;Parent=gene3034;Dbxref=Genbank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NC_009708.1 RefSeq gene 3390993 3391175 . + . ID=gene3035;Name=YPSIP31758_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16395 NC_009708.1 Protein Homology CDS 3390993 3391175 . + 0 ID=cds2940;Parent=gene3035;Dbxref=Genbank:WP_041175786.1;Name=WP_041175786.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175786.1;transl_table=11 NC_009708.1 RefSeq gene 3391251 3391327 . - . ID=gene3036;Name=YPSIP31758_RS16400;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS16400;old_locus_tag=YpsIP31758_4261 NC_009708.1 tRNAscan-SE tRNA 3391251 3391327 . - . ID=rna90;Parent=gene3036;anticodon=(pos:complement(3391291..3391293));gbkey=tRNA;product=tRNA-Arg NC_009708.1 tRNAscan-SE exon 3391251 3391327 . - . ID=id264;Parent=rna90;anticodon=(pos:complement(3391291..3391293));gbkey=tRNA;product=tRNA-Arg NC_009708.1 RefSeq gene 3391543 3392409 . + . ID=gene3037;Name=YPSIP31758_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16405;old_locus_tag=YpsIP31758_3012 NC_009708.1 Protein Homology CDS 3391543 3392409 . + 0 ID=cds2941;Parent=gene3037;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11 NC_009708.1 RefSeq gene 3392424 3392636 . + . ID=gene3038;Name=YPSIP31758_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16410;old_locus_tag=YpsIP31758_3013 NC_009708.1 Protein Homology CDS 3392424 3392636 . + 0 ID=cds2942;Parent=gene3038;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11 NC_009708.1 RefSeq gene 3392858 3394243 . - . ID=gene3039;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16415;old_locus_tag=YpsIP31758_3014 NC_009708.1 Protein Homology CDS 3392858 3394243 . - 0 ID=cds2943;Parent=gene3039;Dbxref=Genbank:WP_002222677.1;Name=WP_002222677.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_002222677.1;transl_table=11 NC_009708.1 RefSeq gene 3394454 3394948 . + . ID=gene3040;Name=YPSIP31758_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16420;old_locus_tag=YpsIP31758_3015 NC_009708.1 Protein Homology CDS 3394454 3394948 . + 0 ID=cds2944;Parent=gene3040;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11 NC_009708.1 RefSeq gene 3394959 3395681 . + . ID=gene3041;Name=YPSIP31758_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16425;old_locus_tag=YpsIP31758_3016 NC_009708.1 Protein Homology CDS 3394959 3395681 . + 0 ID=cds2945;Parent=gene3041;Dbxref=Genbank:WP_012105553.1;Name=WP_012105553.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_012105553.1;transl_table=11 NC_009708.1 RefSeq gene 3395977 3396501 . + . ID=gene3042;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16430;old_locus_tag=YpsIP31758_3017 NC_009708.1 Protein Homology CDS 3395977 3396501 . + 0 ID=cds2946;Parent=gene3042;Dbxref=Genbank:WP_002208569.1;Name=WP_002208569.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NC_009708.1 RefSeq gene 3396498 3397562 . + . ID=gene3043;Name=YPSIP31758_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16435;old_locus_tag=YpsIP31758_3018 NC_009708.1 Protein Homology CDS 3396498 3397562 . + 0 ID=cds2947;Parent=gene3043;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11 NC_009708.1 RefSeq gene 3397606 3400035 . - . ID=gene3044;Name=YPSIP31758_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16440;old_locus_tag=YpsIP31758_3019 NC_009708.1 Protein Homology CDS 3397606 3400035 . - 0 ID=cds2948;Parent=gene3044;Dbxref=Genbank:WP_012105554.1;Name=WP_012105554.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012105554.1;transl_table=11 NC_009708.1 RefSeq gene 3400032 3400718 . - . ID=gene3045;Name=YPSIP31758_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16445;old_locus_tag=YpsIP31758_3020 NC_009708.1 Protein Homology CDS 3400032 3400718 . - 0 ID=cds2949;Parent=gene3045;Dbxref=Genbank:WP_011191895.1;Name=WP_011191895.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_011191895.1;transl_table=11 NC_009708.1 RefSeq gene 3400689 3401324 . + . ID=gene3046;Name=YPSIP31758_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16450;old_locus_tag=YpsIP31758_3021 NC_009708.1 Protein Homology CDS 3400689 3401324 . + 0 ID=cds2950;Parent=gene3046;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NC_009708.1 RefSeq gene 3401711 3402487 . + . ID=gene3047;Name=YPSIP31758_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16455;old_locus_tag=YpsIP31758_3022 NC_009708.1 Protein Homology CDS 3401711 3402487 . + 0 ID=cds2951;Parent=gene3047;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NC_009708.1 RefSeq gene 3402564 3403433 . + . ID=gene3048;Name=YPSIP31758_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16460;old_locus_tag=YpsIP31758_3023 NC_009708.1 Protein Homology CDS 3402564 3403433 . + 0 ID=cds2952;Parent=gene3048;Dbxref=Genbank:WP_002208575.1;Name=WP_002208575.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002208575.1;transl_table=11 NC_009708.1 RefSeq gene 3403628 3404542 . + . ID=gene3049;Name=YPSIP31758_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16465;old_locus_tag=YpsIP31758_3024 NC_009708.1 Protein Homology CDS 3403628 3404542 . + 0 ID=cds2953;Parent=gene3049;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11 NC_009708.1 RefSeq gene 3404545 3404994 . + . ID=gene3050;Name=YPSIP31758_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16470;old_locus_tag=YpsIP31758_3025 NC_009708.1 Protein Homology CDS 3404545 3404994 . + 0 ID=cds2954;Parent=gene3050;Dbxref=Genbank:WP_002208577.1;Name=WP_002208577.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208577.1;transl_table=11 NC_009708.1 RefSeq gene 3405161 3405580 . - . ID=gene3051;Name=YPSIP31758_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16475;old_locus_tag=YpsIP31758_3026 NC_009708.1 Protein Homology CDS 3405161 3405580 . - 0 ID=cds2955;Parent=gene3051;Dbxref=Genbank:WP_012105555.1;Name=WP_012105555.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105555.1;transl_table=11 NC_009708.1 RefSeq gene 3405783 3408650 . + . ID=gene3052;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16480;old_locus_tag=YpsIP31758_3027 NC_009708.1 Protein Homology CDS 3405783 3408650 . + 0 ID=cds2956;Parent=gene3052;Dbxref=Genbank:WP_012105556.1;Name=WP_012105556.1;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=WP_012105556.1;transl_table=11 NC_009708.1 RefSeq gene 3408922 3409731 . + . ID=gene3053;Name=YPSIP31758_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16485;old_locus_tag=YpsIP31758_3028 NC_009708.1 Protein Homology CDS 3408922 3409731 . + 0 ID=cds2957;Parent=gene3053;Dbxref=Genbank:WP_012105557.1;Name=WP_012105557.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105557.1;transl_table=11 NC_009708.1 RefSeq gene 3409729 3409812 . - . ID=gene3054;Name=sroB;gbkey=Gene;gene=sroB;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22490 NC_009708.1 RefSeq transcript 3409729 3409812 . - . ID=rna91;Parent=gene3054;gbkey=misc_RNA;gene=sroB;product=sroB RNA NC_009708.1 RefSeq exon 3409729 3409812 . - . ID=id265;Parent=rna91;gbkey=misc_RNA;gene=sroB;product=sroB RNA NC_009708.1 RefSeq gene 3409994 3410473 . + . ID=gene3055;Name=YPSIP31758_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16490;old_locus_tag=YpsIP31758_3029 NC_009708.1 Protein Homology CDS 3409994 3410473 . + 0 ID=cds2958;Parent=gene3055;Dbxref=Genbank:WP_012105558.1;Name=WP_012105558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105558.1;transl_table=11 NC_009708.1 RefSeq gene 3410539 3410796 . + . ID=gene3056;Name=YPSIP31758_RS16495;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS16495 NC_009708.1 RefSeq repeat_region 3410554 3410722 . + . ID=id266;gbkey=repeat_region NC_009708.1 RefSeq gene 3410810 3411049 . + . ID=gene3057;Name=YPSIP31758_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16500;old_locus_tag=YpsIP31758_3031 NC_009708.1 Protein Homology CDS 3410810 3411049 . + 0 ID=cds2959;Parent=gene3057;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NC_009708.1 RefSeq gene 3411153 3412808 . - . ID=gene3058;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16505;old_locus_tag=YpsIP31758_3032 NC_009708.1 Protein Homology CDS 3411153 3412808 . - 0 ID=cds2960;Parent=gene3058;Dbxref=Genbank:WP_012105559.1;Name=WP_012105559.1;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;gbkey=CDS;gene=ushA;product=5'-nucleotidase;protein_id=WP_012105559.1;transl_table=11 NC_009708.1 RefSeq gene 3413089 3414303 . + . ID=gene3059;Name=YPSIP31758_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16510;old_locus_tag=YpsIP31758_3033 NC_009708.1 Protein Homology CDS 3413089 3414303 . + 0 ID=cds2961;Parent=gene3059;Dbxref=Genbank:WP_012105560.1;Name=WP_012105560.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_012105560.1;transl_table=11 NC_009708.1 RefSeq gene 3414538 3416229 . + . ID=gene3060;Name=YPSIP31758_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16515;old_locus_tag=YpsIP31758_3034 NC_009708.1 Protein Homology CDS 3414538 3416229 . + 0 ID=cds2962;Parent=gene3060;Dbxref=Genbank:WP_012105561.1;Name=WP_012105561.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_012105561.1;transl_table=11 NC_009708.1 RefSeq gene 3416326 3417630 . - . ID=gene3061;Name=YPSIP31758_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16520;old_locus_tag=YpsIP31758_3035 NC_009708.1 Protein Homology CDS 3416326 3417630 . - 0 ID=cds2963;Parent=gene3061;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NC_009708.1 RefSeq gene 3417834 3418985 . - . ID=gene3062;Name=YPSIP31758_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16525;old_locus_tag=YpsIP31758_3036 NC_009708.1 Protein Homology CDS 3417834 3418985 . - 0 ID=cds2964;Parent=gene3062;Dbxref=Genbank:WP_011191890.1;Name=WP_011191890.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_011191890.1;transl_table=11 NC_009708.1 RefSeq gene 3419033 3420406 . - . ID=gene3063;Name=YPSIP31758_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16530;old_locus_tag=YpsIP31758_3037 NC_009708.1 Protein Homology CDS 3419033 3420406 . - 0 ID=cds2965;Parent=gene3063;Dbxref=Genbank:WP_011191889.1;Name=WP_011191889.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_011191889.1;transl_table=11 NC_009708.1 RefSeq gene 3420411 3421154 . - . ID=gene3064;Name=YPSIP31758_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16535;old_locus_tag=YpsIP31758_3038 NC_009708.1 Protein Homology CDS 3420411 3421154 . - 0 ID=cds2966;Parent=gene3064;Dbxref=Genbank:WP_012105562.1;Name=WP_012105562.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_012105562.1;transl_table=11 NC_009708.1 RefSeq gene 3421157 3422563 . - . ID=gene3065;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16540;old_locus_tag=YpsIP31758_3039 NC_009708.1 Protein Homology CDS 3421157 3422563 . - 0 ID=cds2967;Parent=gene3065;Dbxref=Genbank:WP_012105563.1;Name=WP_012105563.1;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;protein_id=WP_012105563.1;transl_table=11 NC_009708.1 RefSeq gene 3422736 3423701 . - . ID=gene3066;Name=YPSIP31758_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16545;old_locus_tag=YpsIP31758_3040 NC_009708.1 Protein Homology CDS 3422736 3423701 . - 0 ID=cds2968;Parent=gene3066;Dbxref=Genbank:WP_002223297.1;Name=WP_002223297.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;product=GDP-fucose synthetase;protein_id=WP_002223297.1;transl_table=11 NC_009708.1 RefSeq gene 3423707 3424828 . - . ID=gene3067;Name=YPSIP31758_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16550;old_locus_tag=YpsIP31758_3041 NC_009708.1 Protein Homology CDS 3423707 3424828 . - 0 ID=cds2969;Parent=gene3067;Dbxref=Genbank:WP_011191888.1;Name=WP_011191888.1;Note=catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_011191888.1;transl_table=11 NC_009708.1 RefSeq gene 3424844 3425857 . - . ID=gene3068;Name=YPSIP31758_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16555;old_locus_tag=YpsIP31758_3042 NC_009708.1 Protein Homology CDS 3424844 3425857 . - 0 ID=cds2970;Parent=gene3068;Dbxref=Genbank:WP_011191887.1;Name=WP_011191887.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_011191887.1;transl_table=11 NC_009708.1 RefSeq gene 3426106 3427326 . - . ID=gene3069;Name=YPSIP31758_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16560;old_locus_tag=YpsIP31758_3043 NC_009708.1 Protein Homology CDS 3426106 3427326 . - 0 ID=cds2971;Parent=gene3069;Dbxref=Genbank:WP_011906375.1;Name=WP_011906375.1;gbkey=CDS;product=histidine kinase;protein_id=WP_011906375.1;transl_table=11 NC_009708.1 RefSeq gene 3427323 3428465 . - . ID=gene3070;Name=YPSIP31758_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16565;old_locus_tag=YpsIP31758_3044 NC_009708.1 Protein Homology CDS 3427323 3428465 . - 0 ID=cds2972;Parent=gene3070;Dbxref=Genbank:WP_002208592.1;Name=WP_002208592.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208592.1;transl_table=11 NC_009708.1 RefSeq gene 3428637 3428879 . - . ID=gene3071;Name=YPSIP31758_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16570 NC_009708.1 Protein Homology CDS 3428637 3428879 . - 0 ID=cds2973;Parent=gene3071;Dbxref=Genbank:WP_032466630.1;Name=WP_032466630.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_032466630.1;transl_table=11 NC_009708.1 RefSeq gene 3428946 3429620 . - . ID=gene3072;Name=YPSIP31758_RS16575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS16575;partial=true;pseudo=true;start_range=.,3428946 NC_009708.1 Protein Homology CDS 3428946 3429620 . - 0 ID=cds2974;Parent=gene3072;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glycosyl transferase;pseudo=true;start_range=.,3428946;transl_table=11 NC_009708.1 RefSeq gene 3429631 3430974 . - . ID=gene3073;Name=YPSIP31758_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16580;old_locus_tag=YpsIP31758_3046 NC_009708.1 Protein Homology CDS 3429631 3430974 . - 0 ID=cds2975;Parent=gene3073;Dbxref=Genbank:WP_011191884.1;Name=WP_011191884.1;gbkey=CDS;product=O-unit flippase;protein_id=WP_011191884.1;transl_table=11 NC_009708.1 RefSeq gene 3431173 3432456 . - . ID=gene3074;Name=YPSIP31758_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16585;old_locus_tag=YpsIP31758_3047 NC_009708.1 Protein Homology CDS 3431173 3432456 . - 0 ID=cds2976;Parent=gene3074;Dbxref=Genbank:WP_011191883.1;Name=WP_011191883.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191883.1;transl_table=11 NC_009708.1 RefSeq gene 3432457 3433314 . - . ID=gene3075;Name=YPSIP31758_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16590;old_locus_tag=YpsIP31758_3048 NC_009708.1 Protein Homology CDS 3432457 3433314 . - 0 ID=cds2977;Parent=gene3075;Dbxref=Genbank:WP_011191882.1;Name=WP_011191882.1;gbkey=CDS;product=paratose synthase;protein_id=WP_011191882.1;transl_table=11 NC_009708.1 RefSeq gene 3433351 3434664 . - . ID=gene3076;Name=YPSIP31758_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16595;old_locus_tag=YpsIP31758_3049 NC_009708.1 Protein Homology CDS 3433351 3434664 . - 0 ID=cds2978;Parent=gene3076;Dbxref=Genbank:WP_011191881.1;Name=WP_011191881.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_011191881.1;transl_table=11 NC_009708.1 RefSeq gene 3434682 3435581 . - . ID=gene3077;Name=YPSIP31758_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16600 NC_009708.1 Protein Homology CDS 3434682 3435581 . - 0 ID=cds2979;Parent=gene3077;Dbxref=Genbank:WP_002354671.1;Name=WP_002354671.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11 NC_009708.1 RefSeq gene 3435760 3436533 . - . ID=gene3078;Name=YPSIP31758_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16605;old_locus_tag=YpsIP31758_3051 NC_009708.1 Protein Homology CDS 3435760 3436533 . - 0 ID=cds2980;Parent=gene3078;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NC_009708.1 RefSeq gene 3436571 3437560 . - . ID=gene3079;Name=YPSIP31758_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16610;old_locus_tag=YpsIP31758_3052 NC_009708.1 Protein Homology CDS 3436571 3437560 . - 0 ID=cds2981;Parent=gene3079;Dbxref=Genbank:WP_011191878.1;Name=WP_011191878.1;gbkey=CDS;product=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase;protein_id=WP_011191878.1;transl_table=11 NC_009708.1 RefSeq gene 3438158 3439120 . - . ID=gene3080;Name=YPSIP31758_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16615;old_locus_tag=YpsIP31758_3053 NC_009708.1 Protein Homology CDS 3438158 3439120 . - 0 ID=cds2982;Parent=gene3080;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NC_009708.1 RefSeq gene 3439210 3439854 . - . ID=gene3081;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16620;old_locus_tag=YpsIP31758_3054 NC_009708.1 Protein Homology CDS 3439210 3439854 . - 0 ID=cds2983;Parent=gene3081;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NC_009708.1 RefSeq gene 3440081 3441955 . - . ID=gene3082;Name=YPSIP31758_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16625;old_locus_tag=YpsIP31758_3055 NC_009708.1 Protein Homology CDS 3440081 3441955 . - 0 ID=cds2984;Parent=gene3082;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11 NC_009708.1 RefSeq gene 3442147 3442752 . - . ID=gene3083;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16630;old_locus_tag=YpsIP31758_3057 NC_009708.1 Protein Homology CDS 3442147 3442752 . - 0 ID=cds2985;Parent=gene3083;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11 NC_009708.1 RefSeq gene 3442752 3443084 . - . ID=gene3084;Name=YPSIP31758_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16635;old_locus_tag=YpsIP31758_3058 NC_009708.1 Protein Homology CDS 3442752 3443084 . - 0 ID=cds2986;Parent=gene3084;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11 NC_009708.1 RefSeq gene 3443140 3445116 . - . ID=gene3085;Name=YPSIP31758_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16640;old_locus_tag=YpsIP31758_3059 NC_009708.1 Protein Homology CDS 3443140 3445116 . - 0 ID=cds2987;Parent=gene3085;Dbxref=Genbank:WP_012105566.1;Name=WP_012105566.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_012105566.1;transl_table=11 NC_009708.1 RefSeq gene 3445772 3446335 . - . ID=gene3086;Name=YPSIP31758_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16645;old_locus_tag=YpsIP31758_3060 NC_009708.1 Protein Homology CDS 3445772 3446335 . - 0 ID=cds2988;Parent=gene3086;Dbxref=Genbank:WP_012105567.1;Name=WP_012105567.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_012105567.1;transl_table=11 NC_009708.1 RefSeq gene 3446768 3446956 . + . ID=gene3087;Name=YPSIP31758_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16650;old_locus_tag=YpsIP31758_3061 NC_009708.1 Protein Homology CDS 3446768 3446956 . + 0 ID=cds2989;Parent=gene3087;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11 NC_009708.1 RefSeq gene 3447155 3447691 . + . ID=gene3088;Name=YPSIP31758_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16655;old_locus_tag=YpsIP31758_3062 NC_009708.1 Protein Homology CDS 3447155 3447691 . + 0 ID=cds2990;Parent=gene3088;Dbxref=Genbank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_002208610.1;transl_table=11 NC_009708.1 RefSeq gene 3447862 3448017 . + . ID=gene3089;Name=YPSIP31758_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16660;old_locus_tag=YpsIP31758_3063 NC_009708.1 Protein Homology CDS 3447862 3448017 . + 0 ID=cds2991;Parent=gene3089;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11 NC_009708.1 RefSeq gene 3448357 3451719 . - . ID=gene3090;Name=YPSIP31758_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16665;old_locus_tag=YpsIP31758_3064 NC_009708.1 Protein Homology CDS 3448357 3451719 . - 0 ID=cds2992;Parent=gene3090;Dbxref=Genbank:WP_002208612.1;Name=WP_002208612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208612.1;transl_table=11 NC_009708.1 RefSeq gene 3452015 3452368 . - . ID=gene3091;Name=YPSIP31758_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16670;old_locus_tag=YpsIP31758_3065 NC_009708.1 Protein Homology CDS 3452015 3452368 . - 0 ID=cds2993;Parent=gene3091;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11 NC_009708.1 RefSeq gene 3452381 3453037 . - . ID=gene3092;Name=YPSIP31758_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16675;old_locus_tag=YpsIP31758_3066 NC_009708.1 Protein Homology CDS 3452381 3453037 . - 0 ID=cds2994;Parent=gene3092;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11 NC_009708.1 RefSeq gene 3453182 3454369 . + . ID=gene3093;Name=YPSIP31758_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16680;old_locus_tag=YpsIP31758_3067 NC_009708.1 Protein Homology CDS 3453182 3454369 . + 0 ID=cds2995;Parent=gene3093;Dbxref=Genbank:WP_002208615.1;Name=WP_002208615.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_002208615.1;transl_table=11 NC_009708.1 RefSeq gene 3454386 3457538 . + . ID=gene3094;Name=YPSIP31758_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16685;old_locus_tag=YpsIP31758_3068 NC_009708.1 Protein Homology CDS 3454386 3457538 . + 0 ID=cds2996;Parent=gene3094;Dbxref=Genbank:WP_012105568.1;Name=WP_012105568.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_012105568.1;transl_table=11 NC_009708.1 RefSeq gene 3457724 3457984 . + . ID=gene3095;Name=YPSIP31758_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16690;old_locus_tag=YpsIP31758_3069 NC_009708.1 Protein Homology CDS 3457724 3457984 . + 0 ID=cds2997;Parent=gene3095;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11 NC_009708.1 RefSeq gene 3458000 3458143 . + . ID=gene3096;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16695;old_locus_tag=YpsIP31758_3070 NC_009708.1 Protein Homology CDS 3458000 3458143 . + 0 ID=cds2998;Parent=gene3096;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NC_009708.1 RefSeq gene 3459017 3459370 . + . ID=gene3097;Name=YPSIP31758_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16700;old_locus_tag=YpsIP31758_3071 NC_009708.1 Protein Homology CDS 3459017 3459370 . + 0 ID=cds2999;Parent=gene3097;Dbxref=Genbank:WP_012105569.1;Name=WP_012105569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105569.1;transl_table=11 NC_009708.1 RefSeq gene 3459529 3459897 . + . ID=gene3098;Name=YPSIP31758_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16705;old_locus_tag=YpsIP31758_3072 NC_009708.1 Protein Homology CDS 3459529 3459897 . + 0 ID=cds3000;Parent=gene3098;Dbxref=Genbank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218472.1;transl_table=11 NC_009708.1 RefSeq gene 3459946 3460149 . + . ID=gene3099;Name=YPSIP31758_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16710;old_locus_tag=YpsIP31758_3073 NC_009708.1 Protein Homology CDS 3459946 3460149 . + 0 ID=cds3001;Parent=gene3099;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NC_009708.1 RefSeq gene 3460689 3460788 . - . ID=gene3100;Name=srpB;gbkey=Gene;gene=srpB;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22495 NC_009708.1 RefSeq transcript 3460689 3460788 . - . ID=rna92;Parent=gene3100;gbkey=misc_RNA;gene=srpB;product=bacterial signal recognition particle RNA NC_009708.1 RefSeq exon 3460689 3460788 . - . ID=id267;Parent=rna92;gbkey=misc_RNA;gene=srpB;product=bacterial signal recognition particle RNA NC_009708.1 RefSeq gene 3461055 3461444 . + . ID=gene3101;Name=YPSIP31758_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16715 NC_009708.1 Protein Homology CDS 3461055 3461444 . + 0 ID=cds3002;Parent=gene3101;Dbxref=Genbank:WP_002208623.1;Name=WP_002208623.1;gbkey=CDS;product=6-O-methylguanine DNA methyltransferase;protein_id=WP_002208623.1;transl_table=11 NC_009708.1 RefSeq gene 3461580 3462101 . - . ID=gene3102;Name=YPSIP31758_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16720;old_locus_tag=YpsIP31758_3075 NC_009708.1 Protein Homology CDS 3461580 3462101 . - 0 ID=cds3003;Parent=gene3102;Dbxref=Genbank:WP_011191872.1;Name=WP_011191872.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191872.1;transl_table=11 NC_009708.1 RefSeq gene 3462358 3463218 . + . ID=gene3103;Name=YPSIP31758_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16725;old_locus_tag=YpsIP31758_3076 NC_009708.1 Protein Homology CDS 3462358 3463218 . + 0 ID=cds3004;Parent=gene3103;Dbxref=Genbank:WP_012105571.1;Name=WP_012105571.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_012105571.1;transl_table=11 NC_009708.1 RefSeq gene 3463478 3464767 . - . ID=gene3104;Name=YPSIP31758_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16730;old_locus_tag=YpsIP31758_3077 NC_009708.1 Protein Homology CDS 3463478 3464767 . - 0 ID=cds3005;Parent=gene3104;Dbxref=Genbank:WP_002228344.1;Name=WP_002228344.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_002228344.1;transl_table=11 NC_009708.1 RefSeq gene 3464807 3465145 . - . ID=gene3105;Name=YPSIP31758_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16735;old_locus_tag=YpsIP31758_3078 NC_009708.1 Protein Homology CDS 3464807 3465145 . - 0 ID=cds3006;Parent=gene3105;Dbxref=Genbank:WP_002208627.1;Name=WP_002208627.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_002208627.1;transl_table=11 NC_009708.1 RefSeq gene 3465580 3467403 . - . ID=gene3106;Name=YPSIP31758_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16740;old_locus_tag=YpsIP31758_3079 NC_009708.1 Protein Homology CDS 3465580 3467403 . - 0 ID=cds3007;Parent=gene3106;Dbxref=Genbank:WP_012105572.1;Name=WP_012105572.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_012105572.1;transl_table=11 NC_009708.1 RefSeq gene 3467396 3469162 . - . ID=gene3107;Name=YPSIP31758_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16745;old_locus_tag=YpsIP31758_3080 NC_009708.1 Protein Homology CDS 3467396 3469162 . - 0 ID=cds3008;Parent=gene3107;Dbxref=Genbank:WP_011191870.1;Name=WP_011191870.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191870.1;transl_table=11 NC_009708.1 RefSeq gene 3469264 3469725 . - . ID=gene3108;Name=YPSIP31758_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16750;old_locus_tag=YpsIP31758_3081 NC_009708.1 Protein Homology CDS 3469264 3469725 . - 0 ID=cds3009;Parent=gene3108;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NC_009708.1 RefSeq gene 3469851 3470891 . + . ID=gene3109;Name=YPSIP31758_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16755;old_locus_tag=YpsIP31758_3082 NC_009708.1 Protein Homology CDS 3469851 3470891 . + 0 ID=cds3010;Parent=gene3109;Dbxref=Genbank:WP_002208631.1;Name=WP_002208631.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_002208631.1;transl_table=11 NC_009708.1 RefSeq gene 3471103 3471924 . - . ID=gene3110;Name=YPSIP31758_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16760;old_locus_tag=YpsIP31758_3083 NC_009708.1 Protein Homology CDS 3471103 3471924 . - 0 ID=cds3011;Parent=gene3110;Dbxref=Genbank:WP_012105573.1;Name=WP_012105573.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_012105573.1;transl_table=11 NC_009708.1 RefSeq gene 3472029 3473732 . + . ID=gene3111;Name=YPSIP31758_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16765;old_locus_tag=YpsIP31758_3084 NC_009708.1 Protein Homology CDS 3472029 3473732 . + 0 ID=cds3012;Parent=gene3111;Dbxref=Genbank:WP_011191867.1;Name=WP_011191867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191867.1;transl_table=11 NC_009708.1 RefSeq gene 3474029 3474727 . + . ID=gene3112;Name=YPSIP31758_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16770;old_locus_tag=YpsIP31758_3085 NC_009708.1 Protein Homology CDS 3474029 3474727 . + 0 ID=cds3013;Parent=gene3112;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11 NC_009708.1 RefSeq gene 3474813 3475220 . - . ID=gene3113;Name=YPSIP31758_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16775;old_locus_tag=YpsIP31758_3086 NC_009708.1 Protein Homology CDS 3474813 3475220 . - 0 ID=cds3014;Parent=gene3113;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11 NC_009708.1 RefSeq gene 3475574 3476020 . - . ID=gene3114;Name=YPSIP31758_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16780;old_locus_tag=YpsIP31758_3087 NC_009708.1 Protein Homology CDS 3475574 3476020 . - 0 ID=cds3015;Parent=gene3114;Dbxref=Genbank:WP_012105574.1;Name=WP_012105574.1;gbkey=CDS;product=transporter;protein_id=WP_012105574.1;transl_table=11 NC_009708.1 RefSeq gene 3476160 3478046 . - . ID=gene3115;Name=YPSIP31758_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16785;old_locus_tag=YpsIP31758_3088 NC_009708.1 Protein Homology CDS 3476160 3478046 . - 0 ID=cds3016;Parent=gene3115;Dbxref=Genbank:WP_011191866.1;Name=WP_011191866.1;gbkey=CDS;product=folding chaperone;protein_id=WP_011191866.1;transl_table=11 NC_009708.1 RefSeq gene 3478347 3478619 . - . ID=gene3116;Name=YPSIP31758_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16790;old_locus_tag=YpsIP31758_3089 NC_009708.1 Protein Homology CDS 3478347 3478619 . - 0 ID=cds3017;Parent=gene3116;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11 NC_009708.1 RefSeq gene 3478837 3481191 . - . ID=gene3117;Name=YPSIP31758_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16795;old_locus_tag=YpsIP31758_3090 NC_009708.1 Protein Homology CDS 3478837 3481191 . - 0 ID=cds3018;Parent=gene3117;Dbxref=Genbank:WP_002208640.1;Name=WP_002208640.1;gbkey=CDS;product=peptidase;protein_id=WP_002208640.1;transl_table=11 NC_009708.1 RefSeq gene 3481386 3482657 . - . ID=gene3118;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16800;old_locus_tag=YpsIP31758_3091 NC_009708.1 Protein Homology CDS 3481386 3482657 . - 0 ID=cds3019;Parent=gene3118;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NC_009708.1 RefSeq gene 3482863 3483486 . - . ID=gene3119;Name=YPSIP31758_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16805;old_locus_tag=YpsIP31758_3092 NC_009708.1 Protein Homology CDS 3482863 3483486 . - 0 ID=cds3020;Parent=gene3119;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11 NC_009708.1 RefSeq gene 3483948 3485252 . - . ID=gene3120;Name=YPSIP31758_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16810;old_locus_tag=YpsIP31758_3093 NC_009708.1 Protein Homology CDS 3483948 3485252 . - 0 ID=cds3021;Parent=gene3120;Dbxref=Genbank:WP_002208643.1;Name=WP_002208643.1;gbkey=CDS;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NC_009708.1 RefSeq gene 3485325 3485510 . - . ID=gene3121;Name=YPSIP31758_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16815 NC_009708.1 Protein Homology CDS 3485325 3485510 . - 0 ID=cds3022;Parent=gene3121;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11 NC_009708.1 RefSeq gene 3485669 3485983 . - . ID=gene3122;Name=YPSIP31758_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16820;old_locus_tag=YpsIP31758_3094 NC_009708.1 Protein Homology CDS 3485669 3485983 . - 0 ID=cds3023;Parent=gene3122;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11 NC_009708.1 RefSeq gene 3486338 3486916 . + . ID=gene3123;Name=YPSIP31758_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16825;old_locus_tag=YpsIP31758_3095 NC_009708.1 Protein Homology CDS 3486338 3486916 . + 0 ID=cds3024;Parent=gene3123;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11 NC_009708.1 RefSeq gene 3487033 3488511 . + . ID=gene3124;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16830;old_locus_tag=YpsIP31758_3096 NC_009708.1 Protein Homology CDS 3487033 3488511 . + 0 ID=cds3025;Parent=gene3124;Dbxref=Genbank:WP_002223277.1;Name=WP_002223277.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_002223277.1;transl_table=11 NC_009708.1 RefSeq gene 3488803 3489570 . + . ID=gene3125;Name=YPSIP31758_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16835;old_locus_tag=YpsIP31758_3097 NC_009708.1 Protein Homology CDS 3488803 3489570 . + 0 ID=cds3026;Parent=gene3125;Dbxref=Genbank:WP_012105575.1;Name=WP_012105575.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_012105575.1;transl_table=11 NC_009708.1 RefSeq gene 3489940 3490896 . + . ID=gene3126;Name=YPSIP31758_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16840;old_locus_tag=YpsIP31758_3098 NC_009708.1 Protein Homology CDS 3489940 3490896 . + 0 ID=cds3027;Parent=gene3126;Dbxref=Genbank:WP_002208649.1;Name=WP_002208649.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208649.1;transl_table=11 NC_009708.1 RefSeq gene 3490901 3492892 . + . ID=gene3127;Name=YPSIP31758_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16845;old_locus_tag=YpsIP31758_3099 NC_009708.1 Protein Homology CDS 3490901 3492892 . + 0 ID=cds3028;Parent=gene3127;Dbxref=Genbank:WP_002208650.1;Name=WP_002208650.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NC_009708.1 RefSeq gene 3492882 3493496 . + . ID=gene3128;Name=YPSIP31758_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16850;old_locus_tag=YpsIP31758_3100 NC_009708.1 Protein Homology CDS 3492882 3493496 . + 0 ID=cds3029;Parent=gene3128;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11 NC_009708.1 RefSeq gene 3493496 3493828 . + . ID=gene3129;Name=YPSIP31758_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16855;old_locus_tag=YpsIP31758_3101 NC_009708.1 Protein Homology CDS 3493496 3493828 . + 0 ID=cds3030;Parent=gene3129;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11 NC_009708.1 RefSeq gene 3493842 3494729 . + . ID=gene3130;Name=YPSIP31758_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16860;old_locus_tag=YpsIP31758_3102 NC_009708.1 Protein Homology CDS 3493842 3494729 . + 0 ID=cds3031;Parent=gene3130;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11 NC_009708.1 RefSeq gene 3495213 3496577 . + . ID=gene3131;Name=YPSIP31758_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16865;old_locus_tag=YpsIP31758_3103 NC_009708.1 Protein Homology CDS 3495213 3496577 . + 0 ID=cds3032;Parent=gene3131;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11 NC_009708.1 RefSeq gene 3496701 3497192 . - . ID=gene3132;Name=YPSIP31758_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16870;old_locus_tag=YpsIP31758_3104 NC_009708.1 Protein Homology CDS 3496701 3497192 . - 0 ID=cds3033;Parent=gene3132;Dbxref=Genbank:WP_002208655.1;Name=WP_002208655.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_002208655.1;transl_table=11 NC_009708.1 RefSeq gene 3497424 3498335 . + . ID=gene3133;Name=YPSIP31758_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16875;old_locus_tag=YpsIP31758_3106 NC_009708.1 Protein Homology CDS 3497424 3498335 . + 0 ID=cds3034;Parent=gene3133;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NC_009708.1 RefSeq gene 3498298 3498888 . + . ID=gene3134;Name=YPSIP31758_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16880;old_locus_tag=YpsIP31758_3107 NC_009708.1 Protein Homology CDS 3498298 3498888 . + 0 ID=cds3035;Parent=gene3134;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11 NC_009708.1 RefSeq gene 3498956 3500407 . - . ID=gene3135;Name=YPSIP31758_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16885;old_locus_tag=YpsIP31758_3108 NC_009708.1 Protein Homology CDS 3498956 3500407 . - 0 ID=cds3036;Parent=gene3135;Dbxref=Genbank:WP_002208658.1;Name=WP_002208658.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_002208658.1;transl_table=11 NC_009708.1 RefSeq gene 3500505 3500675 . - . ID=gene3136;Name=YPSIP31758_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16890;old_locus_tag=YpsIP31758_3109 NC_009708.1 Protein Homology CDS 3500505 3500675 . - 0 ID=cds3037;Parent=gene3136;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11 NC_009708.1 RefSeq gene 3500757 3501011 . + . ID=gene3137;Name=YPSIP31758_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16895;old_locus_tag=YpsIP31758_3110 NC_009708.1 Protein Homology CDS 3500757 3501011 . + 0 ID=cds3038;Parent=gene3137;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11 NC_009708.1 RefSeq gene 3501016 3501936 . + . ID=gene3138;Name=YPSIP31758_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16900;old_locus_tag=YpsIP31758_3111 NC_009708.1 Protein Homology CDS 3501016 3501936 . + 0 ID=cds3039;Parent=gene3138;Dbxref=Genbank:WP_011191863.1;Name=WP_011191863.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_011191863.1;transl_table=11 NC_009708.1 RefSeq gene 3502108 3503967 . + . ID=gene3139;Name=YPSIP31758_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16905;old_locus_tag=YpsIP31758_3112 NC_009708.1 Protein Homology CDS 3502108 3503967 . + 0 ID=cds3040;Parent=gene3139;Dbxref=Genbank:WP_012105576.1;Name=WP_012105576.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_012105576.1;transl_table=11 NC_009708.1 RefSeq gene 3504108 3504593 . - . ID=gene3140;Name=YPSIP31758_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16910;old_locus_tag=YpsIP31758_3113 NC_009708.1 Protein Homology CDS 3504108 3504593 . - 0 ID=cds3041;Parent=gene3140;Dbxref=Genbank:WP_002208663.1;Name=WP_002208663.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NC_009708.1 RefSeq gene 3504586 3505575 . - . ID=gene3141;Name=YPSIP31758_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16915;old_locus_tag=YpsIP31758_3114 NC_009708.1 Protein Homology CDS 3504586 3505575 . - 0 ID=cds3042;Parent=gene3141;Dbxref=Genbank:WP_012105577.1;Name=WP_012105577.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_012105577.1;transl_table=11 NC_009708.1 RefSeq gene 3505816 3506232 . - . ID=gene3142;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16920;old_locus_tag=YpsIP31758_3115 NC_009708.1 Protein Homology CDS 3505816 3506232 . - 0 ID=cds3043;Parent=gene3142;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11 NC_009708.1 RefSeq gene 3506253 3506723 . - . ID=gene3143;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16925;old_locus_tag=YpsIP31758_3116 NC_009708.1 Protein Homology CDS 3506253 3506723 . - 0 ID=cds3044;Parent=gene3143;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NC_009708.1 RefSeq gene 3506859 3507968 . - . ID=gene3144;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16930;old_locus_tag=YpsIP31758_3117 NC_009708.1 Protein Homology CDS 3506859 3507968 . - 0 ID=cds3045;Parent=gene3144;Dbxref=Genbank:WP_012105578.1;Name=WP_012105578.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_012105578.1;transl_table=11 NC_009708.1 RefSeq gene 3508100 3508549 . - . ID=gene3145;Name=YPSIP31758_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16935;old_locus_tag=YpsIP31758_3118 NC_009708.1 Protein Homology CDS 3508100 3508549 . - 0 ID=cds3046;Parent=gene3145;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11 NC_009708.1 RefSeq gene 3508620 3509213 . - . ID=gene3146;Name=YPSIP31758_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16940 NC_009708.1 Protein Homology CDS 3508620 3509213 . - 0 ID=cds3047;Parent=gene3146;Dbxref=Genbank:WP_032466145.1;Name=WP_032466145.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466145.1;transl_table=11 NC_009708.1 RefSeq gene 3509246 3509942 . - . ID=gene3147;Name=YPSIP31758_RS16945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS16945;pseudo=true NC_009708.1 Protein Homology CDS 3509246 3509942 . - 0 ID=cds3048;Parent=gene3147;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3510195 3511163 . - . ID=gene3148;Name=YPSIP31758_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16950;old_locus_tag=YpsIP31758_3120 NC_009708.1 Protein Homology CDS 3510195 3511163 . - 0 ID=cds3049;Parent=gene3148;Dbxref=Genbank:WP_002208669.1;Name=WP_002208669.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NC_009708.1 RefSeq gene 3511174 3512988 . - . ID=gene3149;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16955;old_locus_tag=YpsIP31758_3121 NC_009708.1 Protein Homology CDS 3511174 3512988 . - 0 ID=cds3050;Parent=gene3149;Dbxref=Genbank:WP_002354695.1;Name=WP_002354695.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_002354695.1;transl_table=11 NC_009708.1 RefSeq gene 3513049 3513384 . - . ID=gene3150;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16960;old_locus_tag=YpsIP31758_3122 NC_009708.1 Protein Homology CDS 3513049 3513384 . - 0 ID=cds3051;Parent=gene3150;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NC_009708.1 RefSeq gene 3513496 3514620 . - . ID=gene3151;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16965;old_locus_tag=YpsIP31758_3123 NC_009708.1 Protein Homology CDS 3513496 3514620 . - 0 ID=cds3052;Parent=gene3151;Dbxref=Genbank:WP_002208672.1;Name=WP_002208672.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_002208672.1;transl_table=11 NC_009708.1 RefSeq gene 3514713 3515783 . - . ID=gene3152;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16970;old_locus_tag=YpsIP31758_3124 NC_009708.1 Protein Homology CDS 3514713 3515783 . - 0 ID=cds3053;Parent=gene3152;Dbxref=Genbank:WP_012105580.1;Name=WP_012105580.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_012105580.1;transl_table=11 NC_009708.1 RefSeq gene 3515986 3516567 . + . ID=gene3153;Name=YPSIP31758_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16975;old_locus_tag=YpsIP31758_3125 NC_009708.1 Protein Homology CDS 3515986 3516567 . + 0 ID=cds3054;Parent=gene3153;Dbxref=Genbank:WP_012105581.1;Name=WP_012105581.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_012105581.1;transl_table=11 NC_009708.1 RefSeq gene 3516906 3517508 . + . ID=gene3154;Name=YPSIP31758_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16980;old_locus_tag=YpsIP31758_3126 NC_009708.1 Protein Homology CDS 3516906 3517508 . + 0 ID=cds3055;Parent=gene3154;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3517572 3518290 . + . ID=id268;gbkey=repeat_region NC_009708.1 RefSeq gene 3517722 3518180 . + . ID=gene3155;Name=YPSIP31758_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16985;old_locus_tag=YpsIP31758_3127 NC_009708.1 Protein Homology CDS 3517722 3518180 . + 0 ID=cds3056;Parent=gene3155;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_009708.1 RefSeq gene 3518338 3518439 . - . ID=gene3156;Name=YPSIP31758_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16990 NC_009708.1 Protein Homology CDS 3518338 3518439 . - 0 ID=cds3057;Parent=gene3156;Dbxref=Genbank:WP_038824476.1;Name=WP_038824476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038824476.1;transl_table=11 NC_009708.1 RefSeq gene 3518608 3520371 . + . ID=gene3157;Name=YPSIP31758_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS16995;old_locus_tag=YpsIP31758_3128 NC_009708.1 Protein Homology CDS 3518608 3520371 . + 0 ID=cds3058;Parent=gene3157;Dbxref=Genbank:WP_012105582.1;Name=WP_012105582.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_012105582.1;transl_table=11 NC_009708.1 RefSeq gene 3520617 3521297 . - . ID=gene3158;Name=YPSIP31758_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17000;old_locus_tag=YpsIP31758_3129 NC_009708.1 Protein Homology CDS 3520617 3521297 . - 0 ID=cds3059;Parent=gene3158;Dbxref=Genbank:WP_012105583.1;Name=WP_012105583.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_012105583.1;transl_table=11 NC_009708.1 RefSeq gene 3521452 3523281 . - . ID=gene3159;Name=YPSIP31758_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17005;old_locus_tag=YpsIP31758_3131 NC_009708.1 Protein Homology CDS 3521452 3523281 . - 0 ID=cds3060;Parent=gene3159;Dbxref=Genbank:WP_012105584.1;Name=WP_012105584.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_012105584.1;transl_table=11 NC_009708.1 RefSeq gene 3523859 3525253 . - . ID=gene3160;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17010;old_locus_tag=YpsIP31758_3132 NC_009708.1 Protein Homology CDS 3523859 3525253 . - 0 ID=cds3061;Parent=gene3160;Dbxref=Genbank:WP_012105585.1;Name=WP_012105585.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_012105585.1;transl_table=11 NC_009708.1 RefSeq gene 3525329 3526648 . - . ID=gene3161;Name=YPSIP31758_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17015;old_locus_tag=YpsIP31758_3133 NC_009708.1 Protein Homology CDS 3525329 3526648 . - 0 ID=cds3062;Parent=gene3161;Dbxref=Genbank:WP_012105586.1;Name=WP_012105586.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_012105586.1;transl_table=11 NC_009708.1 RefSeq gene 3527122 3528168 . - . ID=gene3162;Name=YPSIP31758_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17020;old_locus_tag=YpsIP31758_3134 NC_009708.1 Protein Homology CDS 3527122 3528168 . - 0 ID=cds3063;Parent=gene3162;Dbxref=Genbank:WP_012105587.1;Name=WP_012105587.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_012105587.1;transl_table=11 NC_009708.1 RefSeq gene 3528190 3529506 . - . ID=gene3163;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17025;old_locus_tag=YpsIP31758_3135 NC_009708.1 Protein Homology CDS 3528190 3529506 . - 0 ID=cds3064;Parent=gene3163;Dbxref=Genbank:WP_012105588.1;Name=WP_012105588.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_012105588.1;transl_table=11 NC_009708.1 RefSeq gene 3529531 3530220 . - . ID=gene3164;Name=YPSIP31758_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17030;old_locus_tag=YpsIP31758_3136 NC_009708.1 Protein Homology CDS 3529531 3530220 . - 0 ID=cds3065;Parent=gene3164;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11 NC_009708.1 RefSeq gene 3530250 3530369 . - . ID=gene3165;Name=YPSIP31758_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17035;old_locus_tag=YpsIP31758_3137 NC_009708.1 Protein Homology CDS 3530250 3530369 . - 0 ID=cds3066;Parent=gene3165;Dbxref=Genbank:WP_002208686.1;Name=WP_002208686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208686.1;transl_table=11 NC_009708.1 RefSeq gene 3530488 3531732 . + . ID=gene3166;Name=YPSIP31758_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17040;old_locus_tag=YpsIP31758_3138 NC_009708.1 Protein Homology CDS 3530488 3531732 . + 0 ID=cds3067;Parent=gene3166;Dbxref=Genbank:WP_012105589.1;Name=WP_012105589.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease subunit SbcD;protein_id=WP_012105589.1;transl_table=11 NC_009708.1 RefSeq gene 3531729 3535418 . + . ID=gene3167;Name=YPSIP31758_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17045;old_locus_tag=YpsIP31758_3139 NC_009708.1 Protein Homology CDS 3531729 3535418 . + 0 ID=cds3068;Parent=gene3167;Dbxref=Genbank:WP_012105590.1;Name=WP_012105590.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_012105590.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3535546 3535832 . + . ID=id269;gbkey=repeat_region NC_009708.1 RefSeq gene 3535887 3536801 . - . ID=gene3168;Name=YPSIP31758_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17050;old_locus_tag=YpsIP31758_3140 NC_009708.1 Protein Homology CDS 3535887 3536801 . - 0 ID=cds3069;Parent=gene3168;Dbxref=Genbank:WP_002208690.1;Name=WP_002208690.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_002208690.1;transl_table=11 NC_009708.1 RefSeq gene 3537134 3538045 . + . ID=gene3169;Name=YPSIP31758_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17055;old_locus_tag=YpsIP31758_3141 NC_009708.1 Protein Homology CDS 3537134 3538045 . + 0 ID=cds3070;Parent=gene3169;Dbxref=Genbank:WP_002208691.1;Name=WP_002208691.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NC_009708.1 RefSeq gene 3538274 3538561 . - . ID=gene3170;Name=YPSIP31758_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17060;old_locus_tag=YpsIP31758_3142 NC_009708.1 Protein Homology CDS 3538274 3538561 . - 0 ID=cds3071;Parent=gene3170;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11 NC_009708.1 RefSeq gene 3538624 3538795 . - . ID=gene3171;Name=YPSIP31758_RS17065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS17065;pseudo=true NC_009708.1 Protein Homology CDS 3538624 3538795 . - 0 ID=cds3072;Parent=gene3171;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3539058 3539582 . - . ID=gene3172;Name=YPSIP31758_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17070;old_locus_tag=YpsIP31758_3143 NC_009708.1 Protein Homology CDS 3539058 3539582 . - 0 ID=cds3073;Parent=gene3172;Dbxref=Genbank:WP_011191851.1;Name=WP_011191851.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_011191851.1;transl_table=11 NC_009708.1 RefSeq gene 3539829 3540386 . - . ID=gene3173;Name=YPSIP31758_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17075;old_locus_tag=YpsIP31758_3144 NC_009708.1 Protein Homology CDS 3539829 3540386 . - 0 ID=cds3074;Parent=gene3173;Dbxref=Genbank:WP_011191850.1;Name=WP_011191850.1;gbkey=CDS;product=methyltransferase;protein_id=WP_011191850.1;transl_table=11 NC_009708.1 RefSeq gene 3540655 3540870 . + . ID=gene3174;Name=YPSIP31758_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17080 NC_009708.1 Protein Homology CDS 3540655 3540870 . + 0 ID=cds3075;Parent=gene3174;Dbxref=Genbank:WP_011191849.1;Name=WP_011191849.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191849.1;transl_table=11 NC_009708.1 RefSeq gene 3541117 3541680 . - . ID=gene3175;Name=YPSIP31758_RS17085;end_range=3541680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS17085;old_locus_tag=YpsIP31758_3145;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 3541117 3541680 . - 0 ID=cds3076;Parent=gene3175;end_range=3541680,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3541884 3542138 . - . ID=gene3176;Name=YPSIP31758_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17090;old_locus_tag=YpsIP31758_3147 NC_009708.1 Protein Homology CDS 3541884 3542138 . - 0 ID=cds3077;Parent=gene3176;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11 NC_009708.1 RefSeq gene 3542336 3543085 . - . ID=gene3177;Name=YPSIP31758_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17095;old_locus_tag=YpsIP31758_3148 NC_009708.1 Protein Homology CDS 3542336 3543085 . - 0 ID=cds3078;Parent=gene3177;Dbxref=Genbank:WP_012105592.1;Name=WP_012105592.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_012105592.1;transl_table=11 NC_009708.1 RefSeq gene 3543422 3544681 . - . ID=gene3178;Name=YPSIP31758_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17100;old_locus_tag=YpsIP31758_3149 NC_009708.1 Protein Homology CDS 3543422 3544681 . - 0 ID=cds3079;Parent=gene3178;Dbxref=Genbank:WP_011191846.1;Name=WP_011191846.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_011191846.1;transl_table=11 NC_009708.1 RefSeq gene 3544691 3545794 . - . ID=gene3179;Name=YPSIP31758_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17105;old_locus_tag=YpsIP31758_3150 NC_009708.1 Protein Homology CDS 3544691 3545794 . - 0 ID=cds3080;Parent=gene3179;Dbxref=Genbank:WP_002208701.1;Name=WP_002208701.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NC_009708.1 RefSeq gene 3545971 3546372 . - . ID=gene3180;Name=YPSIP31758_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17110;old_locus_tag=YpsIP31758_3151 NC_009708.1 Protein Homology CDS 3545971 3546372 . - 0 ID=cds3081;Parent=gene3180;Dbxref=Genbank:WP_012105593.1;Name=WP_012105593.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_012105593.1;transl_table=11 NC_009708.1 RefSeq gene 3546432 3547679 . - . ID=gene3181;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17115;old_locus_tag=YpsIP31758_3152 NC_009708.1 Protein Homology CDS 3546432 3547679 . - 0 ID=cds3082;Parent=gene3181;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11 NC_009708.1 RefSeq gene 3547806 3548264 . - . ID=gene3182;Name=YPSIP31758_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17120;old_locus_tag=YpsIP31758_3153 NC_009708.1 Protein Homology CDS 3547806 3548264 . - 0 ID=cds3083;Parent=gene3182;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NC_009708.1 RefSeq gene 3548691 3548996 . + . ID=gene3183;Name=YPSIP31758_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17125 NC_009708.1 Protein Homology CDS 3548691 3548996 . + 0 ID=cds3084;Parent=gene3183;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11 NC_009708.1 RefSeq gene 3549193 3550797 . + . ID=gene3184;Name=YPSIP31758_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17130;old_locus_tag=YpsIP31758_3154 NC_009708.1 Protein Homology CDS 3549193 3550797 . + 0 ID=cds3085;Parent=gene3184;Dbxref=Genbank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;product=chitin-binding domain protein;protein_id=WP_002208705.1;transl_table=11 NC_009708.1 RefSeq gene 3551256 3552041 . - . ID=gene3185;Name=YPSIP31758_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17135;old_locus_tag=YpsIP31758_3155 NC_009708.1 Protein Homology CDS 3551256 3552041 . - 0 ID=cds3086;Parent=gene3185;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11 NC_009708.1 RefSeq gene 3552889 3553044 . - . ID=gene3186;Name=YPSIP31758_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17140 NC_009708.1 Protein Homology CDS 3552889 3553044 . - 0 ID=cds3087;Parent=gene3186;Dbxref=Genbank:WP_032466136.1;Name=WP_032466136.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466136.1;transl_table=11 NC_009708.1 RefSeq gene 3554042 3555502 . + . ID=gene3187;Name=YPSIP31758_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17145;old_locus_tag=YpsIP31758_3156 NC_009708.1 Protein Homology CDS 3554042 3555502 . + 0 ID=cds3088;Parent=gene3187;Dbxref=Genbank:WP_012105594.1;Name=WP_012105594.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_012105594.1;transl_table=11 NC_009708.1 RefSeq gene 3555616 3556674 . - . ID=gene3188;Name=YPSIP31758_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17150;old_locus_tag=YpsIP31758_3157 NC_009708.1 Protein Homology CDS 3555616 3556674 . - 0 ID=cds3089;Parent=gene3188;Dbxref=Genbank:WP_011191844.1;Name=WP_011191844.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_011191844.1;transl_table=11 NC_009708.1 RefSeq gene 3557030 3557977 . + . ID=gene3189;Name=YPSIP31758_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17155;old_locus_tag=YpsIP31758_3158 NC_009708.1 Protein Homology CDS 3557030 3557977 . + 0 ID=cds3090;Parent=gene3189;Dbxref=Genbank:WP_041175787.1;Name=WP_041175787.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_041175787.1;transl_table=11 NC_009708.1 RefSeq gene 3558222 3558449 . - . ID=gene3190;Name=YPSIP31758_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17160;old_locus_tag=YpsIP31758_3159 NC_009708.1 Protein Homology CDS 3558222 3558449 . - 0 ID=cds3091;Parent=gene3190;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11 NC_009708.1 RefSeq gene 3558462 3559457 . - . ID=gene3191;Name=YPSIP31758_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17165;old_locus_tag=YpsIP31758_3160 NC_009708.1 Protein Homology CDS 3558462 3559457 . - 0 ID=cds3092;Parent=gene3191;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11 NC_009708.1 RefSeq gene 3559525 3560748 . - . ID=gene3192;Name=YPSIP31758_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17170;old_locus_tag=YpsIP31758_3161 NC_009708.1 Protein Homology CDS 3559525 3560748 . - 0 ID=cds3093;Parent=gene3192;Dbxref=Genbank:WP_002208711.1;Name=WP_002208711.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_002208711.1;transl_table=11 NC_009708.1 RefSeq gene 3560764 3561360 . - . ID=gene3193;Name=YPSIP31758_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17175;old_locus_tag=YpsIP31758_3162 NC_009708.1 Protein Homology CDS 3560764 3561360 . - 0 ID=cds3094;Parent=gene3193;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11 NC_009708.1 RefSeq gene 3561367 3561996 . - . ID=gene3194;Name=YPSIP31758_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17180;old_locus_tag=YpsIP31758_3163 NC_009708.1 Protein Homology CDS 3561367 3561996 . - 0 ID=cds3095;Parent=gene3194;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11 NC_009708.1 RefSeq gene 3561989 3562789 . - . ID=gene3195;Name=YPSIP31758_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17185;old_locus_tag=YpsIP31758_3164 NC_009708.1 Protein Homology CDS 3561989 3562789 . - 0 ID=cds3096;Parent=gene3195;Dbxref=Genbank:WP_012105596.1;Name=WP_012105596.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_012105596.1;transl_table=11 NC_009708.1 RefSeq gene 3562779 3564020 . - . ID=gene3196;Name=YPSIP31758_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17190;old_locus_tag=YpsIP31758_3165 NC_009708.1 Protein Homology CDS 3562779 3564020 . - 0 ID=cds3097;Parent=gene3196;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11 NC_009708.1 RefSeq gene 3564024 3565367 . - . ID=gene3197;Name=YPSIP31758_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17195;old_locus_tag=YpsIP31758_3166 NC_009708.1 Protein Homology CDS 3564024 3565367 . - 0 ID=cds3098;Parent=gene3197;Dbxref=Genbank:WP_012105597.1;Name=WP_012105597.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_012105597.1;transl_table=11 NC_009708.1 RefSeq gene 3565863 3566603 . + . ID=gene3198;Name=YPSIP31758_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17200;old_locus_tag=YpsIP31758_3169 NC_009708.1 Protein Homology CDS 3565863 3566603 . + 0 ID=cds3099;Parent=gene3198;Dbxref=Genbank:WP_011191840.1;Name=WP_011191840.1;gbkey=CDS;product=transpeptidase;protein_id=WP_011191840.1;transl_table=11 NC_009708.1 RefSeq gene 3566568 3567341 . - . ID=gene3199;Name=YPSIP31758_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17205;old_locus_tag=YpsIP31758_3168 NC_009708.1 Protein Homology CDS 3566568 3567341 . - 0 ID=cds3100;Parent=gene3199;Dbxref=Genbank:WP_012105598.1;Name=WP_012105598.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_012105598.1;transl_table=11 NC_009708.1 RefSeq gene 3567544 3568125 . - . ID=gene3200;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17210;old_locus_tag=YpsIP31758_3170 NC_009708.1 Protein Homology CDS 3567544 3568125 . - 0 ID=cds3101;Parent=gene3200;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11 NC_009708.1 RefSeq gene 3568365 3570812 . + . ID=gene3201;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17215;old_locus_tag=YpsIP31758_3171 NC_009708.1 Protein Homology CDS 3568365 3570812 . + 0 ID=cds3102;Parent=gene3201;Dbxref=Genbank:WP_011191839.1;Name=WP_011191839.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_011191839.1;transl_table=11 NC_009708.1 RefSeq gene 3570984 3571730 . - . ID=gene3202;Name=YPSIP31758_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17220;old_locus_tag=YpsIP31758_3172 NC_009708.1 Protein Homology CDS 3570984 3571730 . - 0 ID=cds3103;Parent=gene3202;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NC_009708.1 RefSeq gene 3571732 3573585 . - . ID=gene3203;Name=YPSIP31758_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17225;old_locus_tag=YpsIP31758_3173 NC_009708.1 Protein Homology CDS 3571732 3573585 . - 0 ID=cds3104;Parent=gene3203;Dbxref=Genbank:WP_012105599.1;Name=WP_012105599.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_012105599.1;transl_table=11 NC_009708.1 RefSeq gene 3573740 3579472 . - . ID=gene3204;Name=YPSIP31758_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17230;old_locus_tag=YpsIP31758_3174 NC_009708.1 Protein Homology CDS 3573740 3579472 . - 0 ID=cds3105;Parent=gene3204;Dbxref=Genbank:WP_012105600.1;Name=WP_012105600.1;gbkey=CDS;product=adhesin;protein_id=WP_012105600.1;transl_table=11 NC_009708.1 RefSeq gene 3579513 3581303 . - . ID=gene3205;Name=YPSIP31758_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17235;old_locus_tag=YpsIP31758_3175 NC_009708.1 Protein Homology CDS 3579513 3581303 . - 0 ID=cds3106;Parent=gene3205;Dbxref=Genbank:WP_002214693.1;Name=WP_002214693.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002214693.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3582031 3582210 . + . ID=id270;gbkey=repeat_region NC_009708.1 RefSeq gene 3582506 3583729 . - . ID=gene3206;Name=YPSIP31758_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17240;old_locus_tag=YpsIP31758_3178 NC_009708.1 Protein Homology CDS 3582506 3583729 . - 0 ID=cds3107;Parent=gene3206;Dbxref=Genbank:WP_012105601.1;Name=WP_012105601.1;gbkey=CDS;product=methylthioribose kinase;protein_id=WP_012105601.1;transl_table=11 NC_009708.1 RefSeq gene 3583925 3584965 . + . ID=gene3207;Name=YPSIP31758_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17245;old_locus_tag=YpsIP31758_3179 NC_009708.1 Protein Homology CDS 3583925 3584965 . + 0 ID=cds3108;Parent=gene3207;Dbxref=Genbank:WP_011906391.1;Name=WP_011906391.1;gbkey=CDS;product=methylthioribose-1-phosphate isomerase;protein_id=WP_011906391.1;transl_table=11 NC_009708.1 RefSeq gene 3585008 3585550 . - . ID=gene3208;Name=YPSIP31758_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17250;old_locus_tag=YpsIP31758_3180 NC_009708.1 Protein Homology CDS 3585008 3585550 . - 0 ID=cds3109;Parent=gene3208;Dbxref=Genbank:WP_011191833.1;Name=WP_011191833.1;gbkey=CDS;product=acireductone dioxygenase;protein_id=WP_011191833.1;transl_table=11 NC_009708.1 RefSeq gene 3585675 3586364 . - . ID=gene3209;Name=YPSIP31758_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17255;old_locus_tag=YpsIP31758_3181 NC_009708.1 Protein Homology CDS 3585675 3586364 . - 0 ID=cds3110;Parent=gene3209;Dbxref=Genbank:WP_012105602.1;Name=WP_012105602.1;gbkey=CDS;product=enolase-phosphatase E1;protein_id=WP_012105602.1;transl_table=11 NC_009708.1 RefSeq gene 3586361 3587029 . - . ID=gene3210;Name=YPSIP31758_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17260;old_locus_tag=YpsIP31758_3182 NC_009708.1 Protein Homology CDS 3586361 3587029 . - 0 ID=cds3111;Parent=gene3210;Dbxref=Genbank:WP_011906393.1;Name=WP_011906393.1;Note=catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway;gbkey=CDS;product=methylthioribulose-1-phosphate dehydratase;protein_id=WP_011906393.1;transl_table=11 NC_009708.1 RefSeq gene 3587169 3588329 . + . ID=gene3211;Name=YPSIP31758_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17265;old_locus_tag=YpsIP31758_3183 NC_009708.1 Protein Homology CDS 3587169 3588329 . + 0 ID=cds3112;Parent=gene3211;Dbxref=Genbank:WP_012105603.1;Name=WP_012105603.1;Note=catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine;gbkey=CDS;product=aminotransferase;protein_id=WP_012105603.1;transl_table=11 NC_009708.1 RefSeq gene 3588317 3589087 . + . ID=gene3212;Name=YPSIP31758_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17270;old_locus_tag=YpsIP31758_3184 NC_009708.1 Protein Homology CDS 3588317 3589087 . + 0 ID=cds3113;Parent=gene3212;Dbxref=Genbank:WP_011906395.1;Name=WP_011906395.1;Note=NAD(P)-binding;gbkey=CDS;product=hypothetical protein;protein_id=WP_011906395.1;transl_table=11 NC_009708.1 RefSeq gene 3589188 3590471 . - . ID=gene3213;Name=YPSIP31758_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17275;old_locus_tag=YpsIP31758_3185 NC_009708.1 Protein Homology CDS 3589188 3590471 . - 0 ID=cds3114;Parent=gene3213;Dbxref=Genbank:WP_012105604.1;Name=WP_012105604.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_012105604.1;transl_table=11 NC_009708.1 RefSeq gene 3590471 3591826 . - . ID=gene3214;Name=YPSIP31758_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17280;old_locus_tag=YpsIP31758_3186 NC_009708.1 Protein Homology CDS 3590471 3591826 . - 0 ID=cds3115;Parent=gene3214;Dbxref=Genbank:WP_012105605.1;Name=WP_012105605.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_012105605.1;transl_table=11 NC_009708.1 RefSeq gene 3591858 3592604 . - . ID=gene3215;Name=YPSIP31758_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17285;old_locus_tag=YpsIP31758_3187 NC_009708.1 Protein Homology CDS 3591858 3592604 . - 0 ID=cds3116;Parent=gene3215;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NC_009708.1 RefSeq gene 3592585 3593238 . - . ID=gene3216;Name=YPSIP31758_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17290;old_locus_tag=YpsIP31758_3188 NC_009708.1 Protein Homology CDS 3592585 3593238 . - 0 ID=cds3117;Parent=gene3216;Dbxref=Genbank:WP_011191826.1;Name=WP_011191826.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_011191826.1;transl_table=11 NC_009708.1 RefSeq gene 3593235 3593903 . - . ID=gene3217;Name=YPSIP31758_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17295;old_locus_tag=YpsIP31758_3189 NC_009708.1 Protein Homology CDS 3593235 3593903 . - 0 ID=cds3118;Parent=gene3217;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NC_009708.1 RefSeq gene 3593916 3594704 . - . ID=gene3218;Name=YPSIP31758_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17300;old_locus_tag=YpsIP31758_3190 NC_009708.1 Protein Homology CDS 3593916 3594704 . - 0 ID=cds3119;Parent=gene3218;Dbxref=Genbank:WP_011191825.1;Name=WP_011191825.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_011191825.1;transl_table=11 NC_009708.1 RefSeq gene 3594815 3595054 . - . ID=gene3219;Name=YPSIP31758_RS17305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS17305;pseudo=true NC_009708.1 Protein Homology CDS 3594815 3595054 . - 0 ID=cds3120;Parent=gene3219;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3594887..3594889)%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 3595056 3595889 . - . ID=gene3220;Name=YPSIP31758_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17310;old_locus_tag=YpsIP31758_3191 NC_009708.1 Protein Homology CDS 3595056 3595889 . - 0 ID=cds3121;Parent=gene3220;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NC_009708.1 RefSeq gene 3596199 3596402 . + . ID=gene3221;Name=YPSIP31758_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17315;old_locus_tag=YpsIP31758_3193 NC_009708.1 Protein Homology CDS 3596199 3596402 . + 0 ID=cds3122;Parent=gene3221;Dbxref=Genbank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208738.1;transl_table=11 NC_009708.1 RefSeq gene 3596399 3597796 . + . ID=gene3222;Name=YPSIP31758_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17320;old_locus_tag=YpsIP31758_3194 NC_009708.1 Protein Homology CDS 3596399 3597796 . + 0 ID=cds3123;Parent=gene3222;Dbxref=Genbank:WP_002208739.1;Name=WP_002208739.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_002208739.1;transl_table=11 NC_009708.1 RefSeq gene 3597906 3598292 . + . ID=gene3223;Name=YPSIP31758_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17325;old_locus_tag=YpsIP31758_3195 NC_009708.1 Protein Homology CDS 3597906 3598292 . + 0 ID=cds3124;Parent=gene3223;Dbxref=Genbank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002264506.1;transl_table=11 NC_009708.1 RefSeq gene 3598519 3599718 . + . ID=gene3224;Name=YPSIP31758_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17330;old_locus_tag=YpsIP31758_3197 NC_009708.1 Protein Homology CDS 3598519 3599718 . + 0 ID=cds3125;Parent=gene3224;Dbxref=Genbank:WP_011191821.1;Name=WP_011191821.1;gbkey=CDS;product=transporter;protein_id=WP_011191821.1;transl_table=11 NC_009708.1 RefSeq gene 3599878 3600651 . + . ID=gene3225;Name=YPSIP31758_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17335;old_locus_tag=YpsIP31758_3198 NC_009708.1 Protein Homology CDS 3599878 3600651 . + 0 ID=cds3126;Parent=gene3225;Dbxref=Genbank:WP_011191820.1;Name=WP_011191820.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191820.1;transl_table=11 NC_009708.1 RefSeq gene 3600648 3600989 . + . ID=gene3226;Name=YPSIP31758_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17340;old_locus_tag=YpsIP31758_3199 NC_009708.1 Protein Homology CDS 3600648 3600989 . + 0 ID=cds3127;Parent=gene3226;Dbxref=Genbank:WP_011191819.1;Name=WP_011191819.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011191819.1;transl_table=11 NC_009708.1 RefSeq gene 3601161 3601673 . + . ID=gene3227;Name=YPSIP31758_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17345;old_locus_tag=YpsIP31758_3200 NC_009708.1 Protein Homology CDS 3601161 3601673 . + 0 ID=cds3128;Parent=gene3227;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11 NC_009708.1 RefSeq gene 3602057 3603229 . + . ID=gene3228;Name=YPSIP31758_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17350;old_locus_tag=YpsIP31758_3201 NC_009708.1 Protein Homology CDS 3602057 3603229 . + 0 ID=cds3129;Parent=gene3228;Dbxref=Genbank:WP_002208745.1;Name=WP_002208745.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein A;protein_id=WP_002208745.1;transl_table=11 NC_009708.1 RefSeq gene 3603268 3604803 . + . ID=gene3229;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17355;old_locus_tag=YpsIP31758_3202 NC_009708.1 Protein Homology CDS 3603268 3604803 . + 0 ID=cds3130;Parent=gene3229;Dbxref=Genbank:WP_002208746.1;Name=WP_002208746.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NC_009708.1 RefSeq gene 3604936 3606123 . - . ID=gene3230;Name=YPSIP31758_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17360;old_locus_tag=YpsIP31758_3203 NC_009708.1 Protein Homology CDS 3604936 3606123 . - 0 ID=cds3131;Parent=gene3230;Dbxref=Genbank:WP_012105608.1;Name=WP_012105608.1;gbkey=CDS;product=methyltransferase;protein_id=WP_012105608.1;transl_table=11 NC_009708.1 RefSeq gene 3606375 3606812 . + . ID=gene3231;Name=YPSIP31758_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17365;old_locus_tag=YpsIP31758_3204 NC_009708.1 Protein Homology CDS 3606375 3606812 . + 0 ID=cds3132;Parent=gene3231;Dbxref=Genbank:WP_012105609.1;Name=WP_012105609.1;gbkey=CDS;product=thioredoxin;protein_id=WP_012105609.1;transl_table=11 NC_009708.1 RefSeq gene 3606982 3607731 . + . ID=gene3232;Name=YPSIP31758_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17370;old_locus_tag=YpsIP31758_3205 NC_009708.1 Protein Homology CDS 3606982 3607731 . + 0 ID=cds3133;Parent=gene3232;Dbxref=Genbank:WP_012105610.1;Name=WP_012105610.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105610.1;transl_table=11 NC_009708.1 RefSeq gene 3607774 3610416 . + . ID=gene3233;Name=YPSIP31758_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17375;old_locus_tag=YpsIP31758_3206 NC_009708.1 Protein Homology CDS 3607774 3610416 . + 0 ID=cds3134;Parent=gene3233;Dbxref=Genbank:WP_002223249.1;Name=WP_002223249.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=protein lysine acetyltransferase;protein_id=WP_002223249.1;transl_table=11 NC_009708.1 RefSeq gene 3610592 3611947 . + . ID=gene3234;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17380;old_locus_tag=YpsIP31758_3207 NC_009708.1 Protein Homology CDS 3610592 3611947 . + 0 ID=cds3135;Parent=gene3234;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11 NC_009708.1 RefSeq gene 3612009 3612350 . + . ID=gene3235;Name=YPSIP31758_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17385;old_locus_tag=YpsIP31758_3208 NC_009708.1 Protein Homology CDS 3612009 3612350 . + 0 ID=cds3136;Parent=gene3235;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11 NC_009708.1 RefSeq gene 3612459 3612652 . - . ID=gene3236;Name=YPSIP31758_RS22585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22585;pseudo=true NC_009708.1 Protein Homology CDS 3612459 3612652 . - 0 ID=cds3137;Parent=gene3236;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq repeat_region 3612475 3618307 . + . ID=id271;gbkey=repeat_region NC_009708.1 RefSeq gene 3612674 3612789 . - . ID=gene3237;Name=YPSIP31758_RS17390;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS17390;old_locus_tag=YpsIP31758_4262 NC_009708.1 cmsearch rRNA 3612674 3612789 . - . ID=rna93;Parent=gene3237;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 3612674 3612789 . - . ID=id272;Parent=rna93;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq gene 3612881 3615814 . - . ID=gene3238;Name=YPSIP31758_RS17395;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS17395;old_locus_tag=YpsIP31758_4263 NC_009708.1 RefSeq rRNA 3612881 3615814 . - . ID=rna94;Parent=gene3238;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq exon 3612881 3615814 . - . ID=id273;Parent=rna94;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq gene 3616024 3616099 . - . ID=gene3239;Name=YPSIP31758_RS17400;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS17400;old_locus_tag=YpsIP31758_4264 NC_009708.1 tRNAscan-SE tRNA 3616024 3616099 . - . ID=rna95;Parent=gene3239;anticodon=(pos:complement(3616064..3616066));gbkey=tRNA;product=tRNA-Ala NC_009708.1 tRNAscan-SE exon 3616024 3616099 . - . ID=id274;Parent=rna95;anticodon=(pos:complement(3616064..3616066));gbkey=tRNA;product=tRNA-Ala NC_009708.1 RefSeq gene 3616151 3616227 . - . ID=gene3240;Name=YPSIP31758_RS17405;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS17405;old_locus_tag=YpsIP31758_4265 NC_009708.1 tRNAscan-SE tRNA 3616151 3616227 . - . ID=rna96;Parent=gene3240;anticodon=(pos:complement(3616191..3616193));gbkey=tRNA;product=tRNA-Ile NC_009708.1 tRNAscan-SE exon 3616151 3616227 . - . ID=id275;Parent=rna96;anticodon=(pos:complement(3616191..3616193));gbkey=tRNA;product=tRNA-Ile NC_009708.1 RefSeq gene 3616327 3617875 . - . ID=gene3241;Name=YPSIP31758_RS17410;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS17410;old_locus_tag=YpsIP31758_4266 NC_009708.1 RefSeq rRNA 3616327 3617875 . - . ID=rna97;Parent=gene3241;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq exon 3616327 3617875 . - . ID=id276;Parent=rna97;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq gene 3618389 3620962 . - . ID=gene3242;Name=YPSIP31758_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17420;old_locus_tag=YpsIP31758_3212 NC_009708.1 Protein Homology CDS 3618389 3620962 . - 0 ID=cds3138;Parent=gene3242;Dbxref=Genbank:WP_002217405.1;Name=WP_002217405.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_002217405.1;transl_table=11 NC_009708.1 RefSeq gene 3621092 3621823 . - . ID=gene3243;Name=YPSIP31758_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17425;old_locus_tag=YpsIP31758_3213 NC_009708.1 Protein Homology CDS 3621092 3621823 . - 0 ID=cds3139;Parent=gene3243;Dbxref=Genbank:WP_011191814.1;Name=WP_011191814.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191814.1;transl_table=11 NC_009708.1 RefSeq gene 3621825 3622808 . - . ID=gene3244;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17430;old_locus_tag=YpsIP31758_3214 NC_009708.1 Protein Homology CDS 3621825 3622808 . - 0 ID=cds3140;Parent=gene3244;Dbxref=Genbank:WP_012105611.1;Name=WP_012105611.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridine synthase D;protein_id=WP_012105611.1;transl_table=11 NC_009708.1 RefSeq gene 3622944 3623675 . + . ID=gene3245;Name=YPSIP31758_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17435;old_locus_tag=YpsIP31758_3215 NC_009708.1 Protein Homology CDS 3622944 3623675 . + 0 ID=cds3141;Parent=gene3245;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11 NC_009708.1 RefSeq gene 3624030 3624392 . + . ID=gene3246;Name=YPSIP31758_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17440;old_locus_tag=YpsIP31758_3216 NC_009708.1 Protein Homology CDS 3624030 3624392 . + 0 ID=cds3142;Parent=gene3246;Dbxref=Genbank:WP_002209468.1;Name=WP_002209468.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_002209468.1;transl_table=11 NC_009708.1 RefSeq gene 3624754 3625911 . + . ID=gene3247;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17445;old_locus_tag=YpsIP31758_3218 NC_009708.1 Protein Homology CDS 3624754 3625911 . + 0 ID=cds3143;Parent=gene3247;Dbxref=Genbank:WP_002228330.1;Name=WP_002228330.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_002228330.1;transl_table=11 NC_009708.1 RefSeq gene 3626016 3627137 . - . ID=gene3248;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17450;old_locus_tag=YpsIP31758_3219 NC_009708.1 Protein Homology CDS 3626016 3627137 . - 0 ID=cds3144;Parent=gene3248;Dbxref=Genbank:WP_012105612.1;Name=WP_012105612.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_012105612.1;transl_table=11 NC_009708.1 RefSeq gene 3627150 3628220 . - . ID=gene3249;Name=YPSIP31758_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17455;old_locus_tag=YpsIP31758_3220 NC_009708.1 Protein Homology CDS 3627150 3628220 . - 0 ID=cds3145;Parent=gene3249;Dbxref=Genbank:WP_002228238.1;Name=WP_002228238.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002228238.1;transl_table=11 NC_009708.1 RefSeq gene 3628453 3629169 . + . ID=gene3250;Name=YPSIP31758_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17460;old_locus_tag=YpsIP31758_3221 NC_009708.1 Protein Homology CDS 3628453 3629169 . + 0 ID=cds3146;Parent=gene3250;Dbxref=Genbank:WP_012105613.1;Name=WP_012105613.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_012105613.1;transl_table=11 NC_009708.1 RefSeq gene 3629602 3630945 . + . ID=gene3251;Name=YPSIP31758_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17465;old_locus_tag=YpsIP31758_3222 NC_009708.1 Protein Homology CDS 3629602 3630945 . + 0 ID=cds3147;Parent=gene3251;Dbxref=Genbank:WP_012105614.1;Name=WP_012105614.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_012105614.1;transl_table=11 NC_009708.1 RefSeq gene 3631268 3632035 . + . ID=gene3252;Name=YPSIP31758_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17470;old_locus_tag=YpsIP31758_3223 NC_009708.1 Protein Homology CDS 3631268 3632035 . + 0 ID=cds3148;Parent=gene3252;Dbxref=Genbank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209462.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3632229 3632948 . + . ID=id277;gbkey=repeat_region NC_009708.1 RefSeq gene 3632339 3632797 . - . ID=gene3253;Name=YPSIP31758_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17475;old_locus_tag=YpsIP31758_3224 NC_009708.1 Protein Homology CDS 3632339 3632797 . - 0 ID=cds3149;Parent=gene3253;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 3632787 3632942 . - . ID=gene3254;Name=YPSIP31758_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17480 NC_009708.1 Protein Homology CDS 3632787 3632942 . - 0 ID=cds3150;Parent=gene3254;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_009708.1 RefSeq gene 3633009 3633356 . - . ID=gene3255;Name=YPSIP31758_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17485;old_locus_tag=YpsIP31758_3225 NC_009708.1 Protein Homology CDS 3633009 3633356 . - 0 ID=cds3151;Parent=gene3255;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NC_009708.1 RefSeq gene 3633437 3634177 . - . ID=gene3256;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17490;old_locus_tag=YpsIP31758_3226 NC_009708.1 Protein Homology CDS 3633437 3634177 . - 0 ID=cds3152;Parent=gene3256;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11 NC_009708.1 RefSeq gene 3634216 3634764 . - . ID=gene3257;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17495;old_locus_tag=YpsIP31758_3227 NC_009708.1 Protein Homology CDS 3634216 3634764 . - 0 ID=cds3153;Parent=gene3257;Dbxref=Genbank:WP_011191812.1;Name=WP_011191812.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_011191812.1;transl_table=11 NC_009708.1 RefSeq gene 3634786 3635034 . - . ID=gene3258;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17500;old_locus_tag=YpsIP31758_3228 NC_009708.1 Protein Homology CDS 3634786 3635034 . - 0 ID=cds3154;Parent=gene3258;Dbxref=Genbank:WP_002209458.1;Name=WP_002209458.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NC_009708.1 RefSeq gene 3635262 3636623 . - . ID=gene3259;Name=YPSIP31758_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17505;old_locus_tag=YpsIP31758_3230 NC_009708.1 Protein Homology CDS 3635262 3636623 . - 0 ID=cds3155;Parent=gene3259;Dbxref=Genbank:WP_002209456.1;Name=WP_002209456.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_002209456.1;transl_table=11 NC_009708.1 RefSeq gene 3636789 3637580 . + . ID=gene3260;Name=YPSIP31758_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17510;old_locus_tag=YpsIP31758_3231 NC_009708.1 Protein Homology CDS 3636789 3637580 . + 0 ID=cds3156;Parent=gene3260;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11 NC_009708.1 RefSeq gene 3637649 3638932 . + . ID=gene3261;Name=YPSIP31758_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17515;old_locus_tag=YpsIP31758_3232 NC_009708.1 Protein Homology CDS 3637649 3638932 . + 0 ID=cds3157;Parent=gene3261;Dbxref=Genbank:WP_041175788.1;Name=WP_041175788.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175788.1;transl_table=11 NC_009708.1 RefSeq gene 3639021 3639536 . - . ID=gene3262;Name=YPSIP31758_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17520;old_locus_tag=YpsIP31758_3233 NC_009708.1 Protein Homology CDS 3639021 3639536 . - 0 ID=cds3158;Parent=gene3262;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NC_009708.1 RefSeq gene 3639626 3639700 . + . ID=gene3263;Name=sraD;gbkey=Gene;gene=sraD;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22500 NC_009708.1 RefSeq transcript 3639626 3639700 . + . ID=rna98;Parent=gene3263;gbkey=misc_RNA;gene=sraD;product=sraD RNA NC_009708.1 RefSeq exon 3639626 3639700 . + . ID=id278;Parent=rna98;gbkey=misc_RNA;gene=sraD;product=sraD RNA NC_009708.1 RefSeq gene 3639704 3641263 . - . ID=gene3264;Name=YPSIP31758_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17525;old_locus_tag=YpsIP31758_3234 NC_009708.1 Protein Homology CDS 3639704 3641263 . - 0 ID=cds3159;Parent=gene3264;Dbxref=Genbank:WP_041175888.1;Name=WP_041175888.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_041175888.1;transl_table=11 NC_009708.1 RefSeq gene 3641346 3641774 . - . ID=gene3265;Name=YPSIP31758_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17530;old_locus_tag=YpsIP31758_3235 NC_009708.1 Protein Homology CDS 3641346 3641774 . - 0 ID=cds3160;Parent=gene3265;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11 NC_009708.1 RefSeq gene 3641771 3642337 . - . ID=gene3266;Name=YPSIP31758_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17535;old_locus_tag=YpsIP31758_3236 NC_009708.1 Protein Homology CDS 3641771 3642337 . - 0 ID=cds3161;Parent=gene3266;Dbxref=Genbank:WP_002209450.1;Name=WP_002209450.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3642669 3643042 . + . ID=id279;gbkey=repeat_region NC_009708.1 RefSeq gene 3642807 3642883 . - . ID=gene3267;Name=YPSIP31758_RS17540;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS17540;old_locus_tag=YpsIP31758_4268 NC_009708.1 tRNAscan-SE tRNA 3642807 3642883 . - . ID=rna99;Parent=gene3267;anticodon=(pos:complement(3642847..3642849));gbkey=tRNA;product=tRNA-Arg NC_009708.1 tRNAscan-SE exon 3642807 3642883 . - . ID=id280;Parent=rna99;anticodon=(pos:complement(3642847..3642849));gbkey=tRNA;product=tRNA-Arg NC_009708.1 RefSeq gene 3642963 3643039 . - . ID=gene3268;Name=YPSIP31758_RS17545;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS17545;old_locus_tag=YpsIP31758_4269 NC_009708.1 tRNAscan-SE tRNA 3642963 3643039 . - . ID=rna100;Parent=gene3268;anticodon=(pos:complement(3643003..3643005));gbkey=tRNA;product=tRNA-Arg NC_009708.1 tRNAscan-SE exon 3642963 3643039 . - . ID=id281;Parent=rna100;anticodon=(pos:complement(3643003..3643005));gbkey=tRNA;product=tRNA-Arg NC_009708.1 RefSeq gene 3643097 3643173 . - . ID=gene3269;Name=YPSIP31758_RS17550;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS17550;old_locus_tag=YpsIP31758_4270 NC_009708.1 tRNAscan-SE tRNA 3643097 3643173 . - . ID=rna101;Parent=gene3269;anticodon=(pos:complement(3643137..3643139));gbkey=tRNA;product=tRNA-Arg NC_009708.1 tRNAscan-SE exon 3643097 3643173 . - . ID=id282;Parent=rna101;anticodon=(pos:complement(3643137..3643139));gbkey=tRNA;product=tRNA-Arg NC_009708.1 RefSeq gene 3643182 3643274 . - . ID=gene3270;Name=YPSIP31758_RS17555;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS17555;old_locus_tag=YpsIP31758_4271 NC_009708.1 tRNAscan-SE tRNA 3643182 3643274 . - . ID=rna102;Parent=gene3270;anticodon=(pos:complement(3643238..3643240));gbkey=tRNA;product=tRNA-Ser NC_009708.1 tRNAscan-SE exon 3643182 3643274 . - . ID=id283;Parent=rna102;anticodon=(pos:complement(3643238..3643240));gbkey=tRNA;product=tRNA-Ser NC_009708.1 RefSeq gene 3643637 3643822 . - . ID=gene3271;Name=YPSIP31758_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17560;old_locus_tag=YpsIP31758_3237 NC_009708.1 Protein Homology CDS 3643637 3643822 . - 0 ID=cds3162;Parent=gene3271;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11 NC_009708.1 RefSeq gene 3644072 3646699 . - . ID=gene3272;Name=YPSIP31758_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17565;old_locus_tag=YpsIP31758_3238 NC_009708.1 Protein Homology CDS 3644072 3646699 . - 0 ID=cds3163;Parent=gene3272;Dbxref=Genbank:WP_012105619.1;Name=WP_012105619.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_012105619.1;transl_table=11 NC_009708.1 RefSeq gene 3646839 3647387 . - . ID=gene3273;Name=YPSIP31758_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17570;old_locus_tag=YpsIP31758_3239 NC_009708.1 Protein Homology CDS 3646839 3647387 . - 0 ID=cds3164;Parent=gene3273;Dbxref=Genbank:WP_011191807.1;Name=WP_011191807.1;gbkey=CDS;product=regulatory protein RecX;protein_id=WP_011191807.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3647390 3647949 . + . ID=id284;gbkey=repeat_region NC_009708.1 RefSeq gene 3648021 3649091 . - . ID=gene3274;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17575;old_locus_tag=YpsIP31758_3240 NC_009708.1 Protein Homology CDS 3648021 3649091 . - 0 ID=cds3165;Parent=gene3274;Dbxref=Genbank:WP_011191806.1;Name=WP_011191806.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_011191806.1;transl_table=11 NC_009708.1 RefSeq gene 3649206 3649694 . - . ID=gene3275;Name=YPSIP31758_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17580;old_locus_tag=YpsIP31758_3241 NC_009708.1 Protein Homology CDS 3649206 3649694 . - 0 ID=cds3166;Parent=gene3275;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11 NC_009708.1 RefSeq gene 3650011 3651351 . + . ID=gene3276;Name=YPSIP31758_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17585;old_locus_tag=YpsIP31758_3242 NC_009708.1 Protein Homology CDS 3650011 3651351 . + 0 ID=cds3167;Parent=gene3276;Dbxref=Genbank:WP_011191805.1;Name=WP_011191805.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011191805.1;transl_table=11 NC_009708.1 RefSeq gene 3651599 3652543 . + . ID=gene3277;Name=YPSIP31758_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17590;old_locus_tag=YpsIP31758_3245 NC_009708.1 Protein Homology CDS 3651599 3652543 . + 0 ID=cds3168;Parent=gene3277;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NC_009708.1 RefSeq gene 3652535 3652678 . - . ID=gene3278;Name=YPSIP31758_RS22590;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS22590;old_locus_tag=YpsIP31758_3244 NC_009708.1 RefSeq gene 3652765 3654189 . - . ID=gene3279;Name=YPSIP31758_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17595;old_locus_tag=YpsIP31758_3246 NC_009708.1 Protein Homology CDS 3652765 3654189 . - 0 ID=cds3169;Parent=gene3279;Dbxref=Genbank:WP_012105621.1;Name=WP_012105621.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_012105621.1;transl_table=11 NC_009708.1 RefSeq gene 3654210 3655697 . - . ID=gene3280;Name=YPSIP31758_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17600;old_locus_tag=YpsIP31758_3247 NC_009708.1 Protein Homology CDS 3654210 3655697 . - 0 ID=cds3170;Parent=gene3280;Dbxref=Genbank:WP_012105622.1;Name=WP_012105622.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_012105622.1;transl_table=11 NC_009708.1 RefSeq gene 3655700 3656644 . - . ID=gene3281;Name=YPSIP31758_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17605;old_locus_tag=YpsIP31758_3248 NC_009708.1 Protein Homology CDS 3655700 3656644 . - 0 ID=cds3171;Parent=gene3281;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11 NC_009708.1 RefSeq gene 3656637 3657467 . - . ID=gene3282;Name=YPSIP31758_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17610;old_locus_tag=YpsIP31758_3249 NC_009708.1 Protein Homology CDS 3656637 3657467 . - 0 ID=cds3172;Parent=gene3282;Dbxref=Genbank:WP_012105623.1;Name=WP_012105623.1;gbkey=CDS;product=transketolase;protein_id=WP_012105623.1;transl_table=11 NC_009708.1 RefSeq gene 3657706 3658848 . - . ID=gene3283;Name=YPSIP31758_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17615;old_locus_tag=YpsIP31758_3250 NC_009708.1 Protein Homology CDS 3657706 3658848 . - 0 ID=cds3173;Parent=gene3283;Dbxref=Genbank:WP_041175789.1;Name=WP_041175789.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_041175789.1;transl_table=11 NC_009708.1 RefSeq gene 3658848 3660371 . - . ID=gene3284;Name=YPSIP31758_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17620;old_locus_tag=YpsIP31758_3251 NC_009708.1 Protein Homology CDS 3658848 3660371 . - 0 ID=cds3174;Parent=gene3284;Dbxref=Genbank:WP_012105625.1;Name=WP_012105625.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105625.1;transl_table=11 NC_009708.1 RefSeq gene 3660371 3660988 . - . ID=gene3285;Name=YPSIP31758_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17625;old_locus_tag=YpsIP31758_3252 NC_009708.1 Protein Homology CDS 3660371 3660988 . - 0 ID=cds3175;Parent=gene3285;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11 NC_009708.1 RefSeq gene 3661081 3662022 . - . ID=gene3286;Name=YPSIP31758_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17630;old_locus_tag=YpsIP31758_3253 NC_009708.1 Protein Homology CDS 3661081 3662022 . - 0 ID=cds3176;Parent=gene3286;Dbxref=Genbank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11 NC_009708.1 RefSeq gene 3662557 3664770 . + . ID=gene3287;Name=YPSIP31758_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17635;old_locus_tag=YpsIP31758_3254 NC_009708.1 Protein Homology CDS 3662557 3664770 . + 0 ID=cds3177;Parent=gene3287;Dbxref=Genbank:WP_012105626.1;Name=WP_012105626.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_012105626.1;transl_table=11 NC_009708.1 RefSeq gene 3664847 3665230 . + . ID=gene3288;Name=YPSIP31758_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17640;old_locus_tag=YpsIP31758_3255 NC_009708.1 Protein Homology CDS 3664847 3665230 . + 0 ID=cds3178;Parent=gene3288;Dbxref=Genbank:WP_011191799.1;Name=WP_011191799.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_011191799.1;transl_table=11 NC_009708.1 RefSeq gene 3665377 3665907 . + . ID=gene3289;Name=YPSIP31758_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17645;old_locus_tag=YpsIP31758_3256 NC_009708.1 Protein Homology CDS 3665377 3665907 . + 0 ID=cds3179;Parent=gene3289;Dbxref=Genbank:WP_011191798.1;Name=WP_011191798.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome b561;protein_id=WP_011191798.1;transl_table=11 NC_009708.1 RefSeq gene 3666165 3666845 . - . ID=gene3290;Name=YPSIP31758_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17650;old_locus_tag=YpsIP31758_3258 NC_009708.1 Protein Homology CDS 3666165 3666845 . - 0 ID=cds3180;Parent=gene3290;Dbxref=Genbank:WP_012105628.1;Name=WP_012105628.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_012105628.1;transl_table=11 NC_009708.1 RefSeq gene 3667005 3667865 . - . ID=gene3291;Name=YPSIP31758_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17655;old_locus_tag=YpsIP31758_3259 NC_009708.1 Protein Homology CDS 3667005 3667865 . - 0 ID=cds3181;Parent=gene3291;Dbxref=Genbank:WP_012105629.1;Name=WP_012105629.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_012105629.1;transl_table=11 NC_009708.1 RefSeq gene 3667867 3668484 . - . ID=gene3292;Name=YPSIP31758_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17660;old_locus_tag=YpsIP31758_3260 NC_009708.1 Protein Homology CDS 3667867 3668484 . - 0 ID=cds3182;Parent=gene3292;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11 NC_009708.1 RefSeq gene 3668496 3670946 . - . ID=gene3293;Name=YPSIP31758_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17665;old_locus_tag=YpsIP31758_3261 NC_009708.1 Protein Homology CDS 3668496 3670946 . - 0 ID=cds3183;Parent=gene3293;Dbxref=Genbank:WP_012105630.1;Name=WP_012105630.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_012105630.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3671221 3671657 . + . ID=id285;gbkey=repeat_region NC_009708.1 RefSeq gene 3671678 3672373 . - . ID=gene3294;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17670;old_locus_tag=YpsIP31758_3262 NC_009708.1 Protein Homology CDS 3671678 3672373 . - 0 ID=cds3184;Parent=gene3294;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NC_009708.1 RefSeq gene 3673076 3673885 . + . ID=gene3295;Name=YPSIP31758_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17675;old_locus_tag=YpsIP31758_3264 NC_009708.1 Protein Homology CDS 3673076 3673885 . + 0 ID=cds3185;Parent=gene3295;Dbxref=Genbank:WP_002231122.1;Name=WP_002231122.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002231122.1;transl_table=11 NC_009708.1 RefSeq gene 3674046 3675050 . + . ID=gene3296;Name=YPSIP31758_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17680;old_locus_tag=YpsIP31758_3265 NC_009708.1 Protein Homology CDS 3674046 3675050 . + 0 ID=cds3186;Parent=gene3296;Dbxref=Genbank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002216011.1;transl_table=11 NC_009708.1 RefSeq gene 3675199 3676713 . + . ID=gene3297;Name=YPSIP31758_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17685;old_locus_tag=YpsIP31758_3266 NC_009708.1 Protein Homology CDS 3675199 3676713 . + 0 ID=cds3187;Parent=gene3297;Dbxref=Genbank:WP_012105632.1;Name=WP_012105632.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105632.1;transl_table=11 NC_009708.1 RefSeq gene 3676706 3677695 . + . ID=gene3298;Name=YPSIP31758_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17690;old_locus_tag=YpsIP31758_3267 NC_009708.1 Protein Homology CDS 3676706 3677695 . + 0 ID=cds3188;Parent=gene3298;Dbxref=Genbank:WP_012105633.1;Name=WP_012105633.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012105633.1;transl_table=11 NC_009708.1 RefSeq gene 3677708 3678745 . + . ID=gene3299;Name=YPSIP31758_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17695;old_locus_tag=YpsIP31758_3268 NC_009708.1 Protein Homology CDS 3677708 3678745 . + 0 ID=cds3189;Parent=gene3299;Dbxref=Genbank:WP_002216010.1;Name=WP_002216010.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002216010.1;transl_table=11 NC_009708.1 RefSeq gene 3678987 3679868 . + . ID=gene3300;Name=YPSIP31758_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17700;old_locus_tag=YpsIP31758_3269 NC_009708.1 Protein Homology CDS 3678987 3679868 . + 0 ID=cds3190;Parent=gene3300;Dbxref=Genbank:WP_012105634.1;Name=WP_012105634.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_012105634.1;transl_table=11 NC_009708.1 RefSeq gene 3679879 3681375 . + . ID=gene3301;Name=YPSIP31758_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17705;old_locus_tag=YpsIP31758_3270 NC_009708.1 Protein Homology CDS 3679879 3681375 . + 0 ID=cds3191;Parent=gene3301;Dbxref=Genbank:WP_002209419.1;Name=WP_002209419.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_002209419.1;transl_table=11 NC_009708.1 RefSeq gene 3681773 3683416 . + . ID=gene3302;Name=YPSIP31758_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17710;old_locus_tag=YpsIP31758_3271 NC_009708.1 Protein Homology CDS 3681773 3683416 . + 0 ID=cds3192;Parent=gene3302;Dbxref=Genbank:WP_012105635.1;Name=WP_012105635.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_012105635.1;transl_table=11 NC_009708.1 RefSeq gene 3683599 3683850 . + . ID=gene3303;Name=YPSIP31758_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17715;old_locus_tag=YpsIP31758_3272 NC_009708.1 Protein Homology CDS 3683599 3683850 . + 0 ID=cds3193;Parent=gene3303;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11 NC_009708.1 RefSeq gene 3683847 3684632 . + . ID=gene3304;Name=YPSIP31758_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17720;old_locus_tag=YpsIP31758_3273 NC_009708.1 Protein Homology CDS 3683847 3684632 . + 0 ID=cds3194;Parent=gene3304;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11 NC_009708.1 RefSeq gene 3685010 3686134 . - . ID=gene3305;Name=YPSIP31758_RS17725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS17725;old_locus_tag=YpsIP31758_3275;partial=true;pseudo=true;start_range=.,3685010 NC_009708.1 Protein Homology CDS 3685010 3686134 . - 0 ID=cds3195;Parent=gene3305;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=enterotoxin;pseudo=true;start_range=.,3685010;transl_table=11 NC_009708.1 RefSeq gene 3686567 3688663 . - . ID=gene3306;Name=YPSIP31758_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17730;old_locus_tag=YpsIP31758_3276 NC_009708.1 Protein Homology CDS 3686567 3688663 . - 0 ID=cds3196;Parent=gene3306;Dbxref=Genbank:WP_002223222.1;Name=WP_002223222.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002223222.1;transl_table=11 NC_009708.1 RefSeq gene 3688836 3689087 . + . ID=gene3307;Name=YPSIP31758_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17735 NC_009708.1 Protein Homology CDS 3688836 3689087 . + 0 ID=cds3197;Parent=gene3307;Dbxref=Genbank:WP_002223220.1;Name=WP_002223220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223220.1;transl_table=11 NC_009708.1 RefSeq gene 3689324 3690703 . + . ID=gene3308;Name=YPSIP31758_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17740;old_locus_tag=YpsIP31758_3278 NC_009708.1 Protein Homology CDS 3689324 3690703 . + 0 ID=cds3198;Parent=gene3308;Dbxref=Genbank:WP_011191786.1;Name=WP_011191786.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_011191786.1;transl_table=11 NC_009708.1 RefSeq gene 3690774 3691538 . + . ID=gene3309;Name=YPSIP31758_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17745;old_locus_tag=YpsIP31758_3279 NC_009708.1 Protein Homology CDS 3690774 3691538 . + 0 ID=cds3199;Parent=gene3309;Dbxref=Genbank:WP_038823871.1;Name=WP_038823871.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_038823871.1;transl_table=11 NC_009708.1 RefSeq gene 3691962 3692165 . + . ID=gene3310;Name=YPSIP31758_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17750;old_locus_tag=YpsIP31758_3280 NC_009708.1 Protein Homology CDS 3691962 3692165 . + 0 ID=cds3200;Parent=gene3310;Dbxref=Genbank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NC_009708.1 RefSeq gene 3692376 3692639 . + . ID=gene3311;Name=YPSIP31758_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17755 NC_009708.1 Protein Homology CDS 3692376 3692639 . + 0 ID=cds3201;Parent=gene3311;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11 NC_009708.1 RefSeq gene 3692886 3693227 . + . ID=gene3312;Name=YPSIP31758_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17760;old_locus_tag=YpsIP31758_3281 NC_009708.1 Protein Homology CDS 3692886 3693227 . + 0 ID=cds3202;Parent=gene3312;Dbxref=Genbank:WP_002209409.1;Name=WP_002209409.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_002209409.1;transl_table=11 NC_009708.1 RefSeq gene 3693312 3694601 . + . ID=gene3313;Name=YPSIP31758_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17765;old_locus_tag=YpsIP31758_3282 NC_009708.1 Protein Homology CDS 3693312 3694601 . + 0 ID=cds3203;Parent=gene3313;Dbxref=Genbank:WP_011191783.1;Name=WP_011191783.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_011191783.1;transl_table=11 NC_009708.1 RefSeq gene 3695156 3696127 . + . ID=gene3314;Name=YPSIP31758_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17770;old_locus_tag=YpsIP31758_3284 NC_009708.1 Protein Homology CDS 3695156 3696127 . + 0 ID=cds3204;Parent=gene3314;Dbxref=Genbank:WP_002209407.1;Name=WP_002209407.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NC_009708.1 RefSeq gene 3696248 3696922 . - . ID=gene3315;Name=YPSIP31758_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17775;old_locus_tag=YpsIP31758_3285 NC_009708.1 Protein Homology CDS 3696248 3696922 . - 0 ID=cds3205;Parent=gene3315;Dbxref=Genbank:WP_012105640.1;Name=WP_012105640.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_012105640.1;transl_table=11 NC_009708.1 RefSeq gene 3696929 3697930 . - . ID=gene3316;Name=YPSIP31758_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17780;old_locus_tag=YpsIP31758_3286 NC_009708.1 Protein Homology CDS 3696929 3697930 . - 0 ID=cds3206;Parent=gene3316;Dbxref=Genbank:WP_012105641.1;Name=WP_012105641.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_012105641.1;transl_table=11 NC_009708.1 RefSeq gene 3698017 3698787 . - . ID=gene3317;Name=YPSIP31758_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17785;old_locus_tag=YpsIP31758_3287 NC_009708.1 Protein Homology CDS 3698017 3698787 . - 0 ID=cds3207;Parent=gene3317;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11 NC_009708.1 RefSeq gene 3698851 3699966 . - . ID=gene3318;Name=YPSIP31758_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17790;old_locus_tag=YpsIP31758_3288 NC_009708.1 Protein Homology CDS 3698851 3699966 . - 0 ID=cds3208;Parent=gene3318;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NC_009708.1 RefSeq gene 3700438 3700893 . + . ID=gene3319;Name=YPSIP31758_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17795;old_locus_tag=YpsIP31758_3289 NC_009708.1 Protein Homology CDS 3700438 3700893 . + 0 ID=cds3209;Parent=gene3319;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11 NC_009708.1 RefSeq gene 3701067 3701201 . - . ID=gene3320;Name=YPSIP31758_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17800;old_locus_tag=YpsIP31758_3290 NC_009708.1 Protein Homology CDS 3701067 3701201 . - 0 ID=cds3210;Parent=gene3320;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11 NC_009708.1 RefSeq gene 3701698 3704253 . + . ID=gene3321;Name=YPSIP31758_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17805;old_locus_tag=YpsIP31758_3292 NC_009708.1 Protein Homology CDS 3701698 3704253 . + 0 ID=cds3211;Parent=gene3321;Dbxref=Genbank:WP_011191781.1;Name=WP_011191781.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_011191781.1;transl_table=11 NC_009708.1 RefSeq gene 3704626 3705624 . - . ID=gene3322;Name=YPSIP31758_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17810;old_locus_tag=YpsIP31758_3293 NC_009708.1 Protein Homology CDS 3704626 3705624 . - 0 ID=cds3212;Parent=gene3322;Dbxref=Genbank:WP_011191780.1;Name=WP_011191780.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_011191780.1;transl_table=11 NC_009708.1 RefSeq gene 3705679 3706662 . - . ID=gene3323;Name=YPSIP31758_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17815;old_locus_tag=YpsIP31758_3294 NC_009708.1 Protein Homology CDS 3705679 3706662 . - 0 ID=cds3213;Parent=gene3323;Dbxref=Genbank:WP_012105642.1;Name=WP_012105642.1;gbkey=CDS;product=lipoprotein NlpD;protein_id=WP_012105642.1;transl_table=11 NC_009708.1 RefSeq gene 3706784 3707410 . - . ID=gene3324;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17820;old_locus_tag=YpsIP31758_3295 NC_009708.1 Protein Homology CDS 3706784 3707410 . - 0 ID=cds3214;Parent=gene3324;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NC_009708.1 RefSeq gene 3707404 3708168 . - . ID=gene3325;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17825;old_locus_tag=YpsIP31758_3296 NC_009708.1 Protein Homology CDS 3707404 3708168 . - 0 ID=cds3215;Parent=gene3325;Dbxref=Genbank:WP_011191778.1;Name=WP_011191778.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_011191778.1;transl_table=11 NC_009708.1 RefSeq gene 3708146 3709195 . - . ID=gene3326;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=YPSIP31758_RS17830;old_locus_tag=YpsIP31758_3297 NC_009708.1 Protein Homology CDS 3708146 3709195 . - 0 ID=cds3216;Parent=gene3326;Dbxref=Genbank:WP_011191777.1;Name=WP_011191777.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_011191777.1;transl_table=11 NC_009708.1 RefSeq gene 3709206 3709694 . - . ID=gene3327;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17835;old_locus_tag=YpsIP31758_3298 NC_009708.1 Protein Homology CDS 3709206 3709694 . - 0 ID=cds3217;Parent=gene3327;Dbxref=Genbank:WP_002209392.1;Name=WP_002209392.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NC_009708.1 RefSeq gene 3709833 3710558 . - . ID=gene3328;Name=YPSIP31758_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17840;old_locus_tag=YpsIP31758_3299 NC_009708.1 Protein Homology CDS 3709833 3710558 . - 0 ID=cds3218;Parent=gene3328;Dbxref=Genbank:WP_012105643.1;Name=WP_012105643.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_012105643.1;transl_table=11 NC_009708.1 RefSeq gene 3710562 3710882 . - . ID=gene3329;Name=YPSIP31758_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17845;old_locus_tag=YpsIP31758_3300 NC_009708.1 Protein Homology CDS 3710562 3710882 . - 0 ID=cds3219;Parent=gene3329;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NC_009708.1 RefSeq gene 3711196 3711513 . - . ID=gene3330;Name=YPSIP31758_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17850;old_locus_tag=YpsIP31758_3301 NC_009708.1 Protein Homology CDS 3711196 3711513 . - 0 ID=cds3220;Parent=gene3330;Dbxref=Genbank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209389.1;transl_table=11 NC_009708.1 RefSeq gene 3711704 3712345 . - . ID=gene3331;Name=YPSIP31758_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17855;old_locus_tag=YpsIP31758_3302 NC_009708.1 Protein Homology CDS 3711704 3712345 . - 0 ID=cds3221;Parent=gene3331;Dbxref=Genbank:WP_012105644.1;Name=WP_012105644.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylylsulfate kinase;protein_id=WP_012105644.1;transl_table=11 NC_009708.1 RefSeq gene 3712347 3713783 . - . ID=gene3332;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17860;old_locus_tag=YpsIP31758_3303 NC_009708.1 Protein Homology CDS 3712347 3713783 . - 0 ID=cds3222;Parent=gene3332;Dbxref=Genbank:WP_002228227.1;Name=WP_002228227.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_002228227.1;transl_table=11 NC_009708.1 RefSeq gene 3713876 3714784 . - . ID=gene3333;Name=YPSIP31758_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17865;old_locus_tag=YpsIP31758_3304 NC_009708.1 Protein Homology CDS 3713876 3714784 . - 0 ID=cds3223;Parent=gene3333;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11 NC_009708.1 RefSeq gene 3714795 3716213 . - . ID=gene3334;Name=YPSIP31758_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17870;old_locus_tag=YpsIP31758_3305 NC_009708.1 Protein Homology CDS 3714795 3716213 . - 0 ID=cds3224;Parent=gene3334;Dbxref=Genbank:WP_012105645.1;Name=WP_012105645.1;gbkey=CDS;product=siroheme synthase 1;protein_id=WP_012105645.1;transl_table=11 NC_009708.1 RefSeq gene 3716515 3716712 . - . ID=gene3335;Name=YPSIP31758_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17875 NC_009708.1 Protein Homology CDS 3716515 3716712 . - 0 ID=cds3225;Parent=gene3335;Dbxref=Genbank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;product=membrane protein;protein_id=WP_002222261.1;transl_table=11 NC_009708.1 RefSeq gene 3716805 3717005 . + . ID=gene3336;Name=YPSIP31758_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17880;old_locus_tag=YpsIP31758_3307 NC_009708.1 Protein Homology CDS 3716805 3717005 . + 0 ID=cds3226;Parent=gene3336;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11 NC_009708.1 RefSeq gene 3717180 3717587 . + . ID=gene3337;Name=YPSIP31758_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17885;old_locus_tag=YpsIP31758_3308 NC_009708.1 Protein Homology CDS 3717180 3717587 . + 0 ID=cds3227;Parent=gene3337;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3717615 3717795 . + . ID=id286;gbkey=repeat_region NC_009708.1 RefSeq gene 3717831 3718565 . - . ID=gene3338;Name=YPSIP31758_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17890;old_locus_tag=YpsIP31758_3309 NC_009708.1 Protein Homology CDS 3717831 3718565 . - 0 ID=cds3228;Parent=gene3338;Dbxref=Genbank:WP_011191774.1;Name=WP_011191774.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_011191774.1;transl_table=11 NC_009708.1 RefSeq gene 3718562 3720292 . - . ID=gene3339;Name=YPSIP31758_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17895;old_locus_tag=YpsIP31758_3310 NC_009708.1 Protein Homology CDS 3718562 3720292 . - 0 ID=cds3229;Parent=gene3339;Dbxref=Genbank:WP_012105646.1;Name=WP_012105646.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_012105646.1;transl_table=11 NC_009708.1 RefSeq gene 3720292 3722130 . - . ID=gene3340;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17900;old_locus_tag=YpsIP31758_3311 NC_009708.1 Protein Homology CDS 3720292 3722130 . - 0 ID=cds3230;Parent=gene3340;Dbxref=Genbank:WP_012105647.1;Name=WP_012105647.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_012105647.1;transl_table=11 NC_009708.1 RefSeq gene 3722523 3722882 . + . ID=gene3341;Name=YPSIP31758_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17905;old_locus_tag=YpsIP31758_3312 NC_009708.1 Protein Homology CDS 3722523 3722882 . + 0 ID=cds3231;Parent=gene3341;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11 NC_009708.1 RefSeq gene 3723116 3723787 . - . ID=gene3342;Name=YPSIP31758_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17910;old_locus_tag=YpsIP31758_3313 NC_009708.1 Protein Homology CDS 3723116 3723787 . - 0 ID=cds3232;Parent=gene3342;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11 NC_009708.1 RefSeq gene 3723891 3724478 . - . ID=gene3343;Name=YPSIP31758_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17915;old_locus_tag=YpsIP31758_3315 NC_009708.1 Protein Homology CDS 3723891 3724478 . - 0 ID=cds3233;Parent=gene3343;Dbxref=Genbank:WP_012105648.1;Name=WP_012105648.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_012105648.1;transl_table=11 NC_009708.1 RefSeq gene 3724850 3726145 . - . ID=gene3344;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17920;old_locus_tag=YpsIP31758_3316 NC_009708.1 Protein Homology CDS 3724850 3726145 . - 0 ID=cds3234;Parent=gene3344;Dbxref=Genbank:WP_011191770.1;Name=WP_011191770.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_011191770.1;transl_table=11 NC_009708.1 RefSeq gene 3726226 3727863 . - . ID=gene3345;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17925;old_locus_tag=YpsIP31758_3317 NC_009708.1 Protein Homology CDS 3726226 3727863 . - 0 ID=cds3235;Parent=gene3345;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11 NC_009708.1 RefSeq gene 3728075 3728917 . - . ID=gene3346;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17930;old_locus_tag=YpsIP31758_3318 NC_009708.1 Protein Homology CDS 3728075 3728917 . - 0 ID=cds3236;Parent=gene3346;Dbxref=Genbank:WP_011191769.1;Name=WP_011191769.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_011191769.1;transl_table=11 NC_009708.1 RefSeq gene 3728924 3729061 . - . ID=gene3347;Name=YPSIP31758_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17935 NC_009708.1 Protein Homology CDS 3728924 3729061 . - 0 ID=cds3237;Parent=gene3347;Dbxref=Genbank:WP_038824871.1;Name=WP_038824871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038824871.1;transl_table=11 NC_009708.1 RefSeq gene 3729098 3731332 . - . ID=gene3348;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17940;old_locus_tag=YpsIP31758_3319 NC_009708.1 Protein Homology CDS 3729098 3731332 . - 0 ID=cds3238;Parent=gene3348;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11 NC_009708.1 RefSeq gene 3731776 3734568 . + . ID=gene3349;Name=YPSIP31758_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17945;old_locus_tag=YpsIP31758_3322 NC_009708.1 Protein Homology CDS 3731776 3734568 . + 0 ID=cds3239;Parent=gene3349;Dbxref=Genbank:WP_012105649.1;Name=WP_012105649.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_012105649.1;transl_table=11 NC_009708.1 RefSeq gene 3734727 3736172 . - . ID=gene3350;Name=YPSIP31758_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17950;old_locus_tag=YpsIP31758_3323 NC_009708.1 Protein Homology CDS 3734727 3736172 . - 0 ID=cds3240;Parent=gene3350;Dbxref=Genbank:WP_012105650.1;Name=WP_012105650.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_012105650.1;transl_table=11 NC_009708.1 RefSeq gene 3736370 3737890 . - . ID=gene3351;Name=YPSIP31758_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17955;old_locus_tag=YpsIP31758_3324 NC_009708.1 Protein Homology CDS 3736370 3737890 . - 0 ID=cds3241;Parent=gene3351;Dbxref=Genbank:WP_011191765.1;Name=WP_011191765.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_011191765.1;transl_table=11 NC_009708.1 RefSeq gene 3738167 3738868 . + . ID=gene3352;Name=YPSIP31758_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17960;old_locus_tag=YpsIP31758_3325 NC_009708.1 Protein Homology CDS 3738167 3738868 . + 0 ID=cds3242;Parent=gene3352;Dbxref=Genbank:WP_011191764.1;Name=WP_011191764.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_011191764.1;transl_table=11 NC_009708.1 RefSeq gene 3738868 3739710 . + . ID=gene3353;Name=YPSIP31758_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17965;old_locus_tag=YpsIP31758_3326 NC_009708.1 Protein Homology CDS 3738868 3739710 . + 0 ID=cds3243;Parent=gene3353;Dbxref=Genbank:WP_011191763.1;Name=WP_011191763.1;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_011191763.1;transl_table=11 NC_009708.1 RefSeq gene 3739710 3740324 . + . ID=gene3354;Name=YPSIP31758_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17970;old_locus_tag=YpsIP31758_3327 NC_009708.1 Protein Homology CDS 3739710 3740324 . + 0 ID=cds3244;Parent=gene3354;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11 NC_009708.1 RefSeq gene 3740609 3740953 . - . ID=gene3355;Name=YPSIP31758_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17975;old_locus_tag=YpsIP31758_3328 NC_009708.1 Protein Homology CDS 3740609 3740953 . - 0 ID=cds3245;Parent=gene3355;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NC_009708.1 RefSeq gene 3741089 3742525 . - . ID=gene3356;Name=YPSIP31758_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17980;old_locus_tag=YpsIP31758_3329 NC_009708.1 Protein Homology CDS 3741089 3742525 . - 0 ID=cds3246;Parent=gene3356;Dbxref=Genbank:WP_012105651.1;Name=WP_012105651.1;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_012105651.1;transl_table=11 NC_009708.1 RefSeq gene 3742867 3744147 . + . ID=gene3357;Name=YPSIP31758_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17985;old_locus_tag=YpsIP31758_3330 NC_009708.1 Protein Homology CDS 3742867 3744147 . + 0 ID=cds3247;Parent=gene3357;Dbxref=Genbank:WP_011191761.1;Name=WP_011191761.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_011191761.1;transl_table=11 NC_009708.1 RefSeq gene 3744520 3746517 . - . ID=gene3358;Name=YPSIP31758_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17990;old_locus_tag=YpsIP31758_3331 NC_009708.1 Protein Homology CDS 3744520 3746517 . - 0 ID=cds3248;Parent=gene3358;Dbxref=Genbank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=WP_002209361.1;transl_table=11 NC_009708.1 RefSeq gene 3746514 3747425 . - . ID=gene3359;Name=YPSIP31758_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS17995;old_locus_tag=YpsIP31758_3332 NC_009708.1 Protein Homology CDS 3746514 3747425 . - 0 ID=cds3249;Parent=gene3359;Dbxref=Genbank:WP_012105652.1;Name=WP_012105652.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_012105652.1;transl_table=11 NC_009708.1 RefSeq gene 3747584 3748378 . - . ID=gene3360;Name=YPSIP31758_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18000;old_locus_tag=YpsIP31758_3333 NC_009708.1 Protein Homology CDS 3747584 3748378 . - 0 ID=cds3250;Parent=gene3360;Dbxref=Genbank:WP_012105653.1;Name=WP_012105653.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_012105653.1;transl_table=11 NC_009708.1 RefSeq gene 3748700 3751180 . - . ID=gene3361;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=YPSIP31758_RS18005;old_locus_tag=YpsIP31758_3334 NC_009708.1 Protein Homology CDS 3748700 3751180 . - 0 ID=cds3251;Parent=gene3361;Dbxref=Genbank:WP_012105654.1;Name=WP_012105654.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_012105654.1;transl_table=11 NC_009708.1 RefSeq gene 3751289 3753850 . - . ID=gene3362;Name=YPSIP31758_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18010;old_locus_tag=YpsIP31758_3335 NC_009708.1 Protein Homology CDS 3751289 3753850 . - 0 ID=cds3252;Parent=gene3362;Dbxref=Genbank:WP_041175890.1;Name=WP_041175890.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=ATP-dependent helicase HrpB;protein_id=WP_041175890.1;transl_table=11 NC_009708.1 RefSeq gene 3753933 3754508 . + . ID=gene3363;Name=YPSIP31758_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18015;old_locus_tag=YpsIP31758_3336 NC_009708.1 Protein Homology CDS 3753933 3754508 . + 0 ID=cds3253;Parent=gene3363;Dbxref=Genbank:WP_011191757.1;Name=WP_011191757.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_011191757.1;transl_table=11 NC_009708.1 RefSeq gene 3754498 3755253 . + . ID=gene3364;Name=YPSIP31758_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18020;old_locus_tag=YpsIP31758_3337 NC_009708.1 Protein Homology CDS 3754498 3755253 . + 0 ID=cds3254;Parent=gene3364;Dbxref=Genbank:WP_012105656.1;Name=WP_012105656.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_012105656.1;transl_table=11 NC_009708.1 RefSeq gene 3755423 3755878 . + . ID=gene3365;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18025;old_locus_tag=YpsIP31758_3338 NC_009708.1 Protein Homology CDS 3755423 3755878 . + 0 ID=cds3255;Parent=gene3365;Dbxref=Genbank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_002209354.1;transl_table=11 NC_009708.1 RefSeq gene 3756158 3757123 . + . ID=gene3366;Name=YPSIP31758_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18030;old_locus_tag=YpsIP31758_3339 NC_009708.1 Protein Homology CDS 3756158 3757123 . + 0 ID=cds3256;Parent=gene3366;Dbxref=Genbank:WP_012105657.1;Name=WP_012105657.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_012105657.1;transl_table=11 NC_009708.1 RefSeq gene 3757266 3758687 . + . ID=gene3367;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18035;old_locus_tag=YpsIP31758_3340 NC_009708.1 Protein Homology CDS 3757266 3758687 . + 0 ID=cds3257;Parent=gene3367;Dbxref=Genbank:WP_032465644.1;Name=WP_032465644.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_032465644.1;transl_table=11 NC_009708.1 RefSeq gene 3758695 3759174 . + . ID=gene3368;Name=YPSIP31758_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18040;old_locus_tag=YpsIP31758_3341 NC_009708.1 Protein Homology CDS 3758695 3759174 . + 0 ID=cds3258;Parent=gene3368;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11 NC_009708.1 RefSeq gene 3759443 3760240 . + . ID=gene3369;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18045;old_locus_tag=YpsIP31758_3343 NC_009708.1 Protein Homology CDS 3759443 3760240 . + 0 ID=cds3259;Parent=gene3369;Dbxref=Genbank:WP_012105658.1;Name=WP_012105658.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_012105658.1;transl_table=11 NC_009708.1 RefSeq gene 3760328 3761182 . + . ID=gene3370;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18050;old_locus_tag=YpsIP31758_3344 NC_009708.1 Protein Homology CDS 3760328 3761182 . + 0 ID=cds3260;Parent=gene3370;Dbxref=Genbank:WP_011191752.1;Name=WP_011191752.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_011191752.1;transl_table=11 NC_009708.1 RefSeq gene 3761593 3761973 . + . ID=gene3371;Name=YPSIP31758_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18055;old_locus_tag=YpsIP31758_3345 NC_009708.1 Protein Homology CDS 3761593 3761973 . + 0 ID=cds3261;Parent=gene3371;Dbxref=Genbank:WP_011191751.1;Name=WP_011191751.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_011191751.1;transl_table=11 NC_009708.1 RefSeq gene 3762106 3763419 . - . ID=gene3372;Name=YPSIP31758_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18060;old_locus_tag=YpsIP31758_3346 NC_009708.1 Protein Homology CDS 3762106 3763419 . - 0 ID=cds3262;Parent=gene3372;Dbxref=Genbank:WP_012413481.1;Name=WP_012413481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413481.1;transl_table=11 NC_009708.1 RefSeq gene 3763621 3764391 . - . ID=gene3373;Name=YPSIP31758_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18065;old_locus_tag=YpsIP31758_3348 NC_009708.1 Protein Homology CDS 3763621 3764391 . - 0 ID=cds3263;Parent=gene3373;Dbxref=Genbank:WP_012105661.1;Name=WP_012105661.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105661.1;transl_table=11 NC_009708.1 RefSeq gene 3764388 3765314 . - . ID=gene3374;Name=YPSIP31758_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18070;old_locus_tag=YpsIP31758_3349 NC_009708.1 Protein Homology CDS 3764388 3765314 . - 0 ID=cds3264;Parent=gene3374;Dbxref=Genbank:WP_011191749.1;Name=WP_011191749.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191749.1;transl_table=11 NC_009708.1 RefSeq gene 3765550 3766212 . + . ID=gene3375;Name=YPSIP31758_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18075;old_locus_tag=YpsIP31758_3350 NC_009708.1 Protein Homology CDS 3765550 3766212 . + 0 ID=cds3265;Parent=gene3375;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11 NC_009708.1 RefSeq gene 3766402 3766938 . - . ID=gene3376;Name=YPSIP31758_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18080;old_locus_tag=YpsIP31758_3351 NC_009708.1 Protein Homology CDS 3766402 3766938 . - 0 ID=cds3266;Parent=gene3376;Dbxref=Genbank:WP_011191748.1;Name=WP_011191748.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_011191748.1;transl_table=11 NC_009708.1 RefSeq gene 3767158 3768759 . - . ID=gene3377;Name=YPSIP31758_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18085;old_locus_tag=YpsIP31758_3352 NC_009708.1 Protein Homology CDS 3767158 3768759 . - 0 ID=cds3267;Parent=gene3377;Dbxref=Genbank:WP_012105663.1;Name=WP_012105663.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=multicopper oxidase;protein_id=WP_012105663.1;transl_table=11 NC_009708.1 RefSeq gene 3769076 3769423 . + . ID=gene3378;Name=YPSIP31758_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18090;old_locus_tag=YpsIP31758_3353 NC_009708.1 Protein Homology CDS 3769076 3769423 . + 0 ID=cds3268;Parent=gene3378;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11 NC_009708.1 RefSeq gene 3769540 3770430 . + . ID=gene3379;Name=YPSIP31758_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18095;old_locus_tag=YpsIP31758_3354 NC_009708.1 Protein Homology CDS 3769540 3770430 . + 0 ID=cds3269;Parent=gene3379;Dbxref=Genbank:WP_011191746.1;Name=WP_011191746.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_011191746.1;transl_table=11 NC_009708.1 RefSeq gene 3770508 3771302 . + . ID=gene3380;Name=YPSIP31758_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18100;old_locus_tag=YpsIP31758_3355 NC_009708.1 Protein Homology CDS 3770508 3771302 . + 0 ID=cds3270;Parent=gene3380;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11 NC_009708.1 RefSeq gene 3771740 3772627 . + . ID=gene3381;Name=YPSIP31758_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18105;old_locus_tag=YpsIP31758_3357 NC_009708.1 Protein Homology CDS 3771740 3772627 . + 0 ID=cds3271;Parent=gene3381;Dbxref=Genbank:WP_012105665.1;Name=WP_012105665.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_012105665.1;transl_table=11 NC_009708.1 RefSeq gene 3772752 3773111 . - . ID=gene3382;Name=YPSIP31758_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18110;old_locus_tag=YpsIP31758_3358 NC_009708.1 Protein Homology CDS 3772752 3773111 . - 0 ID=cds3272;Parent=gene3382;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11 NC_009708.1 RefSeq gene 3773410 3776007 . - . ID=gene3383;Name=YPSIP31758_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18115;old_locus_tag=YpsIP31758_3359 NC_009708.1 Protein Homology CDS 3773410 3776007 . - 0 ID=cds3273;Parent=gene3383;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NC_009708.1 RefSeq gene 3776567 3777991 . - . ID=gene3384;Name=YPSIP31758_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18120;old_locus_tag=YpsIP31758_3360 NC_009708.1 Protein Homology CDS 3776567 3777991 . - 0 ID=cds3274;Parent=gene3384;Dbxref=Genbank:WP_002209332.1;Name=WP_002209332.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NC_009708.1 RefSeq gene 3778297 3779877 . - . ID=gene3385;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18125;old_locus_tag=YpsIP31758_3362 NC_009708.1 Protein Homology CDS 3778297 3779877 . - 0 ID=cds3275;Parent=gene3385;Dbxref=Genbank:WP_012105666.1;Name=WP_012105666.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_012105666.1;transl_table=11 NC_009708.1 RefSeq gene 3779891 3782554 . - . ID=gene3386;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18130;old_locus_tag=YpsIP31758_3363 NC_009708.1 Protein Homology CDS 3779891 3782554 . - 0 ID=cds3276;Parent=gene3386;Dbxref=Genbank:WP_012105668.1;Name=WP_012105668.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_012105668.1;transl_table=11 NC_009708.1 RefSeq gene 3782750 3783514 . - . ID=gene3387;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18135;old_locus_tag=YpsIP31758_3364 NC_009708.1 Protein Homology CDS 3782750 3783514 . - 0 ID=cds3277;Parent=gene3387;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11 NC_009708.1 RefSeq gene 3784377 3785774 . + . ID=gene3388;Name=YPSIP31758_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18140;old_locus_tag=YpsIP31758_3366 NC_009708.1 Protein Homology CDS 3784377 3785774 . + 0 ID=cds3278;Parent=gene3388;Dbxref=Genbank:WP_012105670.1;Name=WP_012105670.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_012105670.1;transl_table=11 NC_009708.1 RefSeq gene 3786207 3787061 . - . ID=gene3389;Name=YPSIP31758_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18145;old_locus_tag=YpsIP31758_3367 NC_009708.1 Protein Homology CDS 3786207 3787061 . - 0 ID=cds3279;Parent=gene3389;Dbxref=Genbank:WP_002209326.1;Name=WP_002209326.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209326.1;transl_table=11 NC_009708.1 RefSeq gene 3787334 3787885 . - . ID=gene3390;Name=YPSIP31758_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18150;old_locus_tag=YpsIP31758_3368 NC_009708.1 Protein Homology CDS 3787334 3787885 . - 0 ID=cds3280;Parent=gene3390;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11 NC_009708.1 RefSeq gene 3787998 3788906 . + . ID=gene3391;Name=YPSIP31758_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18155;old_locus_tag=YpsIP31758_3369 NC_009708.1 Protein Homology CDS 3787998 3788906 . + 0 ID=cds3281;Parent=gene3391;Dbxref=Genbank:WP_002209324.1;Name=WP_002209324.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_002209324.1;transl_table=11 NC_009708.1 RefSeq gene 3789109 3789573 . + . ID=gene3392;Name=YPSIP31758_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18160;old_locus_tag=YpsIP31758_3370 NC_009708.1 Protein Homology CDS 3789109 3789573 . + 0 ID=cds3282;Parent=gene3392;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11 NC_009708.1 RefSeq gene 3789566 3791104 . + . ID=gene3393;Name=YPSIP31758_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18165;old_locus_tag=YpsIP31758_3371 NC_009708.1 Protein Homology CDS 3789566 3791104 . + 0 ID=cds3283;Parent=gene3393;Dbxref=Genbank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;product=transporter HofB;protein_id=WP_002216083.1;transl_table=11 NC_009708.1 RefSeq gene 3791101 3792300 . + . ID=gene3394;Name=YPSIP31758_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18170;old_locus_tag=YpsIP31758_3372 NC_009708.1 Protein Homology CDS 3791101 3792300 . + 0 ID=cds3284;Parent=gene3394;Dbxref=Genbank:WP_011191739.1;Name=WP_011191739.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_011191739.1;transl_table=11 NC_009708.1 RefSeq gene 3792741 3793784 . - . ID=gene3395;Name=YPSIP31758_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18175;old_locus_tag=YpsIP31758_3373 NC_009708.1 Protein Homology CDS 3792741 3793784 . - 0 ID=cds3285;Parent=gene3395;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NC_009708.1 RefSeq gene 3793870 3794070 . + . ID=gene3396;Name=YPSIP31758_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18180 NC_009708.1 Protein Homology CDS 3793870 3794070 . + 0 ID=cds3286;Parent=gene3396;Dbxref=Genbank:WP_038401630.1;Name=WP_038401630.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401630.1;transl_table=11 NC_009708.1 RefSeq gene 3794080 3794700 . + . ID=gene3397;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18185;old_locus_tag=YpsIP31758_3374 NC_009708.1 Protein Homology CDS 3794080 3794700 . + 0 ID=cds3287;Parent=gene3397;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NC_009708.1 RefSeq gene 3794697 3795449 . + . ID=gene3398;Name=YPSIP31758_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18190;old_locus_tag=YpsIP31758_3375 NC_009708.1 Protein Homology CDS 3794697 3795449 . + 0 ID=cds3288;Parent=gene3398;Dbxref=Genbank:WP_012105671.1;Name=WP_012105671.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_012105671.1;transl_table=11 NC_009708.1 RefSeq gene 3795657 3795863 . + . ID=gene3399;Name=YPSIP31758_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18195;old_locus_tag=YpsIP31758_3376 NC_009708.1 Protein Homology CDS 3795657 3795863 . + 0 ID=cds3289;Parent=gene3399;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NC_009708.1 RefSeq gene 3796033 3796419 . - . ID=gene3400;Name=YPSIP31758_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18200;old_locus_tag=YpsIP31758_3377 NC_009708.1 Protein Homology CDS 3796033 3796419 . - 0 ID=cds3290;Parent=gene3400;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3796497 3796671 . + . ID=id287;gbkey=repeat_region NC_009708.1 RefSeq gene 3796714 3799428 . - . ID=gene3401;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=YPSIP31758_RS18205;old_locus_tag=YpsIP31758_3378 NC_009708.1 Protein Homology CDS 3796714 3799428 . - 0 ID=cds3291;Parent=gene3401;Dbxref=Genbank:WP_002210426.1;Name=WP_002210426.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NC_009708.1 RefSeq gene 3799506 3800039 . - . ID=gene3402;Name=YPSIP31758_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18210;old_locus_tag=YpsIP31758_3379 NC_009708.1 Protein Homology CDS 3799506 3800039 . - 0 ID=cds3292;Parent=gene3402;Dbxref=Genbank:WP_011191738.1;Name=WP_011191738.1;gbkey=CDS;product=secretion monitor;protein_id=WP_011191738.1;transl_table=11 NC_009708.1 RefSeq gene 3800068 3800592 . + . ID=gene3403;Name=YPSIP31758_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18215;old_locus_tag=YpsIP31758_3380 NC_009708.1 Protein Homology CDS 3800068 3800592 . + 0 ID=cds3293;Parent=gene3403;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11 NC_009708.1 RefSeq gene 3800774 3801694 . - . ID=gene3404;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18220;old_locus_tag=YpsIP31758_3381 NC_009708.1 Protein Homology CDS 3800774 3801694 . - 0 ID=cds3294;Parent=gene3404;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NC_009708.1 RefSeq gene 3801794 3802945 . - . ID=gene3405;Name=YPSIP31758_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18225;old_locus_tag=YpsIP31758_3382 NC_009708.1 Protein Homology CDS 3801794 3802945 . - 0 ID=cds3295;Parent=gene3405;Dbxref=Genbank:WP_002210430.1;Name=WP_002210430.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NC_009708.1 RefSeq gene 3803018 3804274 . - . ID=gene3406;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18230;old_locus_tag=YpsIP31758_3383 NC_009708.1 Protein Homology CDS 3803018 3804274 . - 0 ID=cds3296;Parent=gene3406;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NC_009708.1 RefSeq gene 3804301 3805128 . - . ID=gene3407;Name=YPSIP31758_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18235;old_locus_tag=YpsIP31758_3384 NC_009708.1 Protein Homology CDS 3804301 3805128 . - 0 ID=cds3297;Parent=gene3407;Dbxref=Genbank:WP_011191736.1;Name=WP_011191736.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_011191736.1;transl_table=11 NC_009708.1 RefSeq gene 3805130 3806050 . - . ID=gene3408;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18240;old_locus_tag=YpsIP31758_3385 NC_009708.1 Protein Homology CDS 3805130 3806050 . - 0 ID=cds3298;Parent=gene3408;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NC_009708.1 RefSeq gene 3806043 3807518 . - . ID=gene3409;Name=YPSIP31758_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18245;old_locus_tag=YpsIP31758_3386 NC_009708.1 Protein Homology CDS 3806043 3807518 . - 0 ID=cds3299;Parent=gene3409;Dbxref=Genbank:WP_002216457.1;Name=WP_002216457.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11 NC_009708.1 RefSeq gene 3807656 3808726 . - . ID=gene3410;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18250;old_locus_tag=YpsIP31758_3387 NC_009708.1 Protein Homology CDS 3807656 3808726 . - 0 ID=cds3300;Parent=gene3410;Dbxref=Genbank:WP_011191735.1;Name=WP_011191735.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_011191735.1;transl_table=11 NC_009708.1 RefSeq gene 3808723 3809925 . - . ID=gene3411;Name=YPSIP31758_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18255;old_locus_tag=YpsIP31758_3388 NC_009708.1 Protein Homology CDS 3808723 3809925 . - 0 ID=cds3301;Parent=gene3411;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NC_009708.1 RefSeq gene 3809925 3811241 . - . ID=gene3412;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18260;old_locus_tag=YpsIP31758_3389 NC_009708.1 Protein Homology CDS 3809925 3811241 . - 0 ID=cds3302;Parent=gene3412;Dbxref=Genbank:WP_012105672.1;Name=WP_012105672.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_012105672.1;transl_table=11 NC_009708.1 RefSeq gene 3811244 3812326 . - . ID=gene3413;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18265;old_locus_tag=YpsIP31758_3390 NC_009708.1 Protein Homology CDS 3811244 3812326 . - 0 ID=cds3303;Parent=gene3413;Dbxref=Genbank:WP_002210437.1;Name=WP_002210437.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_002210437.1;transl_table=11 NC_009708.1 RefSeq gene 3812320 3813696 . - . ID=gene3414;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18270;old_locus_tag=YpsIP31758_3391 NC_009708.1 Protein Homology CDS 3812320 3813696 . - 0 ID=cds3304;Parent=gene3414;Dbxref=Genbank:WP_011191733.1;Name=WP_011191733.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_011191733.1;transl_table=11 NC_009708.1 RefSeq gene 3813693 3815180 . - . ID=gene3415;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18275;old_locus_tag=YpsIP31758_3392 NC_009708.1 Protein Homology CDS 3813693 3815180 . - 0 ID=cds3305;Parent=gene3415;Dbxref=Genbank:WP_012105673.1;Name=WP_012105673.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_012105673.1;transl_table=11 NC_009708.1 RefSeq gene 3815167 3816930 . - . ID=gene3416;Name=YPSIP31758_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18280;old_locus_tag=YpsIP31758_3393 NC_009708.1 Protein Homology CDS 3815167 3816930 . - 0 ID=cds3306;Parent=gene3416;Dbxref=Genbank:WP_011191731.1;Name=WP_011191731.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_011191731.1;transl_table=11 NC_009708.1 RefSeq gene 3816996 3817313 . - . ID=gene3417;Name=YPSIP31758_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18285;old_locus_tag=YpsIP31758_3394 NC_009708.1 Protein Homology CDS 3816996 3817313 . - 0 ID=cds3307;Parent=gene3417;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NC_009708.1 RefSeq gene 3817310 3818272 . - . ID=gene3418;Name=YPSIP31758_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18290;old_locus_tag=YpsIP31758_3395 NC_009708.1 Protein Homology CDS 3817310 3818272 . - 0 ID=cds3308;Parent=gene3418;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11 NC_009708.1 RefSeq gene 3818275 3818733 . - . ID=gene3419;Name=YPSIP31758_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18295;old_locus_tag=YpsIP31758_3396 NC_009708.1 Protein Homology CDS 3818275 3818733 . - 0 ID=cds3309;Parent=gene3419;Dbxref=Genbank:WP_011191730.1;Name=WP_011191730.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_011191730.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3819302 3819475 . + . ID=id288;gbkey=repeat_region NC_009708.1 RefSeq gene 3819835 3820275 . + . ID=gene3420;Name=YPSIP31758_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18300;old_locus_tag=YpsIP31758_3397 NC_009708.1 Protein Homology CDS 3819835 3820275 . + 0 ID=cds3310;Parent=gene3420;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3820365 3821079 . + . ID=id289;gbkey=repeat_region NC_009708.1 RefSeq gene 3820475 3820933 . - . ID=gene3421;Name=YPSIP31758_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18305;old_locus_tag=YpsIP31758_3398 NC_009708.1 Protein Homology CDS 3820475 3820933 . - 0 ID=cds3311;Parent=gene3421;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_009708.1 RefSeq gene 3821117 3822127 . - . ID=gene3422;Name=YPSIP31758_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18310;old_locus_tag=YpsIP31758_3399 NC_009708.1 Protein Homology CDS 3821117 3822127 . - 0 ID=cds3312;Parent=gene3422;Dbxref=Genbank:WP_011191729.1;Name=WP_011191729.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191729.1;transl_table=11 NC_009708.1 RefSeq gene 3822194 3822310 . + . ID=gene3423;Name=YPSIP31758_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18315 NC_009708.1 Protein Homology CDS 3822194 3822310 . + 0 ID=cds3313;Parent=gene3423;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11 NC_009708.1 RefSeq gene 3822578 3823072 . - . ID=gene3424;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18320;old_locus_tag=YpsIP31758_3400 NC_009708.1 Protein Homology CDS 3822578 3823072 . - 0 ID=cds3314;Parent=gene3424;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11 NC_009708.1 RefSeq gene 3823075 3824802 . - . ID=gene3425;Name=YPSIP31758_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18325;old_locus_tag=YpsIP31758_3401 NC_009708.1 Protein Homology CDS 3823075 3824802 . - 0 ID=cds3315;Parent=gene3425;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11 NC_009708.1 RefSeq gene 3825121 3825231 . - . ID=gene3426;Name=YPSIP31758_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18330 NC_009708.1 Protein Homology CDS 3825121 3825231 . - 0 ID=cds3316;Parent=gene3426;Dbxref=Genbank:WP_032467132.1;Name=WP_032467132.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467132.1;transl_table=11 NC_009708.1 RefSeq gene 3825262 3827067 . - . ID=gene3427;Name=YPSIP31758_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18335;old_locus_tag=YpsIP31758_3402 NC_009708.1 Protein Homology CDS 3825262 3827067 . - 0 ID=cds3317;Parent=gene3427;Dbxref=Genbank:WP_012105674.1;Name=WP_012105674.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_012105674.1;transl_table=11 NC_009708.1 RefSeq gene 3827064 3827270 . - . ID=gene3428;Name=YPSIP31758_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18340 NC_009708.1 Protein Homology CDS 3827064 3827270 . - 0 ID=cds3318;Parent=gene3428;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11 NC_009708.1 RefSeq gene 3827620 3828576 . - . ID=gene3429;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18345;old_locus_tag=YpsIP31758_3403 NC_009708.1 Protein Homology CDS 3827620 3828576 . - 0 ID=cds3319;Parent=gene3429;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11 NC_009708.1 RefSeq gene 3829791 3831353 . + . ID=gene3430;Name=YPSIP31758_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18350;old_locus_tag=YpsIP31758_3405 NC_009708.1 Protein Homology CDS 3829791 3831353 . + 0 ID=cds3320;Parent=gene3430;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NC_009708.1 RefSeq gene 3831356 3832447 . + . ID=gene3431;Name=YPSIP31758_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18355;old_locus_tag=YpsIP31758_3406 NC_009708.1 Protein Homology CDS 3831356 3832447 . + 0 ID=cds3321;Parent=gene3431;Dbxref=Genbank:WP_012105676.1;Name=WP_012105676.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_012105676.1;transl_table=11 NC_009708.1 RefSeq gene 3832449 3833879 . + . ID=gene3432;Name=YPSIP31758_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18360;old_locus_tag=YpsIP31758_3407 NC_009708.1 Protein Homology CDS 3832449 3833879 . + 0 ID=cds3322;Parent=gene3432;Dbxref=Genbank:WP_002210455.1;Name=WP_002210455.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11 NC_009708.1 RefSeq gene 3833894 3834496 . + . ID=gene3433;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18365;old_locus_tag=YpsIP31758_3408 NC_009708.1 Protein Homology CDS 3833894 3834496 . + 0 ID=cds3323;Parent=gene3433;Dbxref=Genbank:WP_012105677.1;Name=WP_012105677.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_012105677.1;transl_table=11 NC_009708.1 RefSeq gene 3834737 3835918 . - . ID=gene3434;Name=YPSIP31758_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18370;old_locus_tag=YpsIP31758_3409 NC_009708.1 Protein Homology CDS 3834737 3835918 . - 0 ID=cds3324;Parent=gene3434;Dbxref=Genbank:WP_002224086.1;Name=WP_002224086.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002224086.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3836024 3836226 . + . ID=id290;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 3836234 3836436 . + . ID=id291;gbkey=repeat_region NC_009708.1 RefSeq gene 3836239 3836412 . - . ID=gene3435;Name=YPSIP31758_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18375 NC_009708.1 Protein Homology CDS 3836239 3836412 . - 0 ID=cds3325;Parent=gene3435;Dbxref=Genbank:WP_041175790.1;Name=WP_041175790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175790.1;transl_table=11 NC_009708.1 RefSeq gene 3836650 3838311 . + . ID=gene3436;Name=YPSIP31758_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18380;old_locus_tag=YpsIP31758_3411 NC_009708.1 Protein Homology CDS 3836650 3838311 . + 0 ID=cds3326;Parent=gene3436;Dbxref=Genbank:WP_011191725.1;Name=WP_011191725.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191725.1;transl_table=11 NC_009708.1 RefSeq gene 3838412 3838696 . - . ID=gene3437;Name=YPSIP31758_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18385 NC_009708.1 Protein Homology CDS 3838412 3838696 . - 0 ID=cds3327;Parent=gene3437;Dbxref=Genbank:WP_041175791.1;Name=WP_041175791.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175791.1;transl_table=11 NC_009708.1 RefSeq gene 3839197 3839604 . + . ID=gene3438;Name=YPSIP31758_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18390 NC_009708.1 Protein Homology CDS 3839197 3839604 . + 0 ID=cds3328;Parent=gene3438;Dbxref=Genbank:WP_041175792.1;Name=WP_041175792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175792.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3839530 3840248 . + . ID=id292;gbkey=repeat_region NC_009708.1 RefSeq gene 3839640 3840098 . - . ID=gene3439;Name=YPSIP31758_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18395;old_locus_tag=YpsIP31758_3413 NC_009708.1 Protein Homology CDS 3839640 3840098 . - 0 ID=cds3329;Parent=gene3439;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 3840238 3840954 . + . ID=gene3440;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS18400;partial=true;pseudo=true;start_range=.,3840238 NC_009708.1 Protein Homology CDS 3840238 3840954 . + 0 ID=cds3330;Parent=gene3440;Note=part of the thiamine and TPP transport system tbpA-thiPQ;exception=unextendable partial coding region;gbkey=CDS;gene=tbpA;partial=true;product=thiamine ABC transporter substrate-binding protein;pseudo=true;start_range=.,3840238;transl_table=11 NC_009708.1 RefSeq gene 3840930 3842537 . + . ID=gene3441;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YPSIP31758_RS18405;old_locus_tag=YpsIP31758_3415 NC_009708.1 Protein Homology CDS 3840930 3842537 . + 0 ID=cds3331;Parent=gene3441;Dbxref=Genbank:WP_011191722.1;Name=WP_011191722.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_011191722.1;transl_table=11 NC_009708.1 RefSeq gene 3842524 3843234 . + . ID=gene3442;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18410;old_locus_tag=YpsIP31758_3416 NC_009708.1 Protein Homology CDS 3842524 3843234 . + 0 ID=cds3332;Parent=gene3442;Dbxref=Genbank:WP_012105678.1;Name=WP_012105678.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine ABC transporter ATP-binding protein;protein_id=WP_012105678.1;transl_table=11 NC_009708.1 RefSeq gene 3843303 3844070 . - . ID=gene3443;Name=YPSIP31758_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18415;old_locus_tag=YpsIP31758_3417 NC_009708.1 Protein Homology CDS 3843303 3844070 . - 0 ID=cds3333;Parent=gene3443;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11 NC_009708.1 RefSeq gene 3844266 3846635 . + . ID=gene3444;Name=YPSIP31758_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18420;old_locus_tag=YpsIP31758_3418 NC_009708.1 Protein Homology CDS 3844266 3846635 . + 0 ID=cds3334;Parent=gene3444;Dbxref=Genbank:WP_012105679.1;Name=WP_012105679.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase;protein_id=WP_012105679.1;transl_table=11 NC_009708.1 RefSeq gene 3847096 3850002 . + . ID=gene3445;Name=YPSIP31758_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18425;old_locus_tag=YpsIP31758_3419 NC_009708.1 Protein Homology CDS 3847096 3850002 . + 0 ID=cds3335;Parent=gene3445;Dbxref=Genbank:WP_011191719.1;Name=WP_011191719.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_011191719.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3850045 3850215 . + . ID=id293;gbkey=repeat_region NC_009708.1 RefSeq gene 3850258 3850611 . - . ID=gene3446;Name=YPSIP31758_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18430;old_locus_tag=YpsIP31758_3420 NC_009708.1 Protein Homology CDS 3850258 3850611 . - 0 ID=cds3336;Parent=gene3446;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11 NC_009708.1 RefSeq gene 3850633 3854127 . - . ID=gene3447;Name=YPSIP31758_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18435;old_locus_tag=YpsIP31758_3421 NC_009708.1 Protein Homology CDS 3850633 3854127 . - 0 ID=cds3337;Parent=gene3447;Dbxref=Genbank:WP_012105680.1;Name=WP_012105680.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105680.1;transl_table=11 NC_009708.1 RefSeq gene 3854136 3855746 . - . ID=gene3448;Name=YPSIP31758_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18440;old_locus_tag=YpsIP31758_3422 NC_009708.1 Protein Homology CDS 3854136 3855746 . - 0 ID=cds3338;Parent=gene3448;Dbxref=Genbank:WP_011191718.1;Name=WP_011191718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191718.1;transl_table=11 NC_009708.1 RefSeq gene 3855743 3857098 . - . ID=gene3449;Name=YPSIP31758_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18445;old_locus_tag=YpsIP31758_3423 NC_009708.1 Protein Homology CDS 3855743 3857098 . - 0 ID=cds3339;Parent=gene3449;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11 NC_009708.1 RefSeq gene 3857218 3857709 . - . ID=gene3450;Name=YPSIP31758_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18450;old_locus_tag=YpsIP31758_3424 NC_009708.1 Protein Homology CDS 3857218 3857709 . - 0 ID=cds3340;Parent=gene3450;Dbxref=Genbank:WP_011191717.1;Name=WP_011191717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191717.1;transl_table=11 NC_009708.1 RefSeq gene 3857702 3858067 . - . ID=gene3451;Name=YPSIP31758_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18455;old_locus_tag=YpsIP31758_3425 NC_009708.1 Protein Homology CDS 3857702 3858067 . - 0 ID=cds3341;Parent=gene3451;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11 NC_009708.1 RefSeq gene 3858073 3858690 . - . ID=gene3452;Name=YPSIP31758_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18460;old_locus_tag=YpsIP31758_3426 NC_009708.1 Protein Homology CDS 3858073 3858690 . - 0 ID=cds3342;Parent=gene3452;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11 NC_009708.1 RefSeq gene 3858683 3859786 . - . ID=gene3453;Name=YPSIP31758_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18465;old_locus_tag=YpsIP31758_3427 NC_009708.1 Protein Homology CDS 3858683 3859786 . - 0 ID=cds3343;Parent=gene3453;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11 NC_009708.1 RefSeq gene 3859812 3862031 . - . ID=gene3454;Name=YPSIP31758_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18470;old_locus_tag=YpsIP31758_3428 NC_009708.1 Protein Homology CDS 3859812 3862031 . - 0 ID=cds3344;Parent=gene3454;Dbxref=Genbank:WP_002224087.1;Name=WP_002224087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224087.1;transl_table=11 NC_009708.1 RefSeq gene 3862044 3864392 . - . ID=gene3455;Name=YPSIP31758_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18475;old_locus_tag=YpsIP31758_3429 NC_009708.1 Protein Homology CDS 3862044 3864392 . - 0 ID=cds3345;Parent=gene3455;Dbxref=Genbank:WP_012105682.1;Name=WP_012105682.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012105682.1;transl_table=11 NC_009708.1 RefSeq gene 3864496 3867084 . - . ID=gene3456;Name=YPSIP31758_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18480;old_locus_tag=YpsIP31758_3430 NC_009708.1 Protein Homology CDS 3864496 3867084 . - 0 ID=cds3346;Parent=gene3456;Dbxref=Genbank:WP_002210475.1;Name=WP_002210475.1;gbkey=CDS;product=peptidase;protein_id=WP_002210475.1;transl_table=11 NC_009708.1 RefSeq gene 3867102 3868085 . - . ID=gene3457;Name=YPSIP31758_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18485;old_locus_tag=YpsIP31758_3431 NC_009708.1 Protein Homology CDS 3867102 3868085 . - 0 ID=cds3347;Parent=gene3457;Dbxref=Genbank:WP_012105683.1;Name=WP_012105683.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_012105683.1;transl_table=11 NC_009708.1 RefSeq gene 3868078 3869922 . - . ID=gene3458;Name=YPSIP31758_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18490;old_locus_tag=YpsIP31758_3432 NC_009708.1 Protein Homology CDS 3868078 3869922 . - 0 ID=cds3348;Parent=gene3458;Dbxref=Genbank:WP_011191714.1;Name=WP_011191714.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_011191714.1;transl_table=11 NC_009708.1 RefSeq gene 3869955 3870398 . - . ID=gene3459;Name=YPSIP31758_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18495;old_locus_tag=YpsIP31758_3433 NC_009708.1 Protein Homology CDS 3869955 3870398 . - 0 ID=cds3349;Parent=gene3459;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11 NC_009708.1 RefSeq gene 3870472 3870990 . - . ID=gene3460;Name=YPSIP31758_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18500;old_locus_tag=YpsIP31758_3434 NC_009708.1 Protein Homology CDS 3870472 3870990 . - 0 ID=cds3350;Parent=gene3460;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11 NC_009708.1 RefSeq gene 3871153 3872655 . - . ID=gene3461;Name=YPSIP31758_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18505;old_locus_tag=YpsIP31758_3435 NC_009708.1 Protein Homology CDS 3871153 3872655 . - 0 ID=cds3351;Parent=gene3461;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11 NC_009708.1 RefSeq gene 3872664 3873224 . - . ID=gene3462;Name=YPSIP31758_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18510;old_locus_tag=YpsIP31758_3436 NC_009708.1 Protein Homology CDS 3872664 3873224 . - 0 ID=cds3352;Parent=gene3462;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11 NC_009708.1 RefSeq gene 3873235 3874248 . - . ID=gene3463;Name=YPSIP31758_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18515;old_locus_tag=YpsIP31758_3437 NC_009708.1 Protein Homology CDS 3873235 3874248 . - 0 ID=cds3353;Parent=gene3463;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11 NC_009708.1 RefSeq gene 3874578 3875321 . + . ID=gene3464;Name=YPSIP31758_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18520;old_locus_tag=YpsIP31758_3438 NC_009708.1 Protein Homology CDS 3874578 3875321 . + 0 ID=cds3354;Parent=gene3464;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11 NC_009708.1 RefSeq gene 3876544 3877164 . + . ID=gene3465;Name=YPSIP31758_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18525;old_locus_tag=YpsIP31758_3439 NC_009708.1 Protein Homology CDS 3876544 3877164 . + 0 ID=cds3355;Parent=gene3465;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11 NC_009708.1 RefSeq gene 3877481 3878314 . - . ID=gene3466;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18530;old_locus_tag=YpsIP31758_3440 NC_009708.1 Protein Homology CDS 3877481 3878314 . - 0 ID=cds3356;Parent=gene3466;Dbxref=Genbank:WP_011191713.1;Name=WP_011191713.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_011191713.1;transl_table=11 NC_009708.1 RefSeq gene 3878499 3880841 . + . ID=gene3467;Name=YPSIP31758_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18535;old_locus_tag=YpsIP31758_3441 NC_009708.1 Protein Homology CDS 3878499 3880841 . + 0 ID=cds3357;Parent=gene3467;Dbxref=Genbank:WP_011191712.1;Name=WP_011191712.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_011191712.1;transl_table=11 NC_009708.1 RefSeq gene 3880909 3882213 . + . ID=gene3468;Name=YPSIP31758_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18540;old_locus_tag=YpsIP31758_3442 NC_009708.1 Protein Homology CDS 3880909 3882213 . + 0 ID=cds3358;Parent=gene3468;Dbxref=Genbank:WP_002210488.1;Name=WP_002210488.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_002210488.1;transl_table=11 NC_009708.1 RefSeq gene 3882197 3883192 . + . ID=gene3469;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18545;old_locus_tag=YpsIP31758_3443 NC_009708.1 Protein Homology CDS 3882197 3883192 . + 0 ID=cds3359;Parent=gene3469;Dbxref=Genbank:WP_011191711.1;Name=WP_011191711.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_011191711.1;transl_table=11 NC_009708.1 RefSeq gene 3883185 3884003 . + . ID=gene3470;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18550;old_locus_tag=YpsIP31758_3444 NC_009708.1 Protein Homology CDS 3883185 3884003 . + 0 ID=cds3360;Parent=gene3470;Dbxref=Genbank:WP_011191710.1;Name=WP_011191710.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_011191710.1;transl_table=11 NC_009708.1 RefSeq gene 3884017 3884394 . + . ID=gene3471;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18555;old_locus_tag=YpsIP31758_3445 NC_009708.1 Protein Homology CDS 3884017 3884394 . + 0 ID=cds3361;Parent=gene3471;Dbxref=Genbank:WP_011191709.1;Name=WP_011191709.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_011191709.1;transl_table=11 NC_009708.1 RefSeq gene 3884411 3885280 . + . ID=gene3472;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18560;old_locus_tag=YpsIP31758_3446 NC_009708.1 Protein Homology CDS 3884411 3885280 . + 0 ID=cds3362;Parent=gene3472;Dbxref=Genbank:WP_012105684.1;Name=WP_012105684.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_012105684.1;transl_table=11 NC_009708.1 RefSeq gene 3885370 3885834 . - . ID=gene3473;Name=YPSIP31758_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18565;old_locus_tag=YpsIP31758_3447 NC_009708.1 Protein Homology CDS 3885370 3885834 . - 0 ID=cds3363;Parent=gene3473;Dbxref=Genbank:WP_012105685.1;Name=WP_012105685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105685.1;transl_table=11 NC_009708.1 RefSeq gene 3885958 3886179 . - . ID=gene3474;Name=YPSIP31758_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18570 NC_009708.1 Protein Homology CDS 3885958 3886179 . - 0 ID=cds3364;Parent=gene3474;Dbxref=Genbank:WP_041175793.1;Name=WP_041175793.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175793.1;transl_table=11 NC_009708.1 RefSeq gene 3886657 3887139 . - . ID=gene3475;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18575;old_locus_tag=YpsIP31758_3449 NC_009708.1 Protein Homology CDS 3886657 3887139 . - 0 ID=cds3365;Parent=gene3475;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NC_009708.1 RefSeq gene 3887289 3887753 . - . ID=gene3476;Name=YPSIP31758_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18580;old_locus_tag=YpsIP31758_3450 NC_009708.1 Protein Homology CDS 3887289 3887753 . - 0 ID=cds3366;Parent=gene3476;Dbxref=Genbank:WP_032466075.1;Name=WP_032466075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466075.1;transl_table=11 NC_009708.1 RefSeq gene 3887750 3888550 . - . ID=gene3477;Name=YPSIP31758_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18585;old_locus_tag=YpsIP31758_3451 NC_009708.1 Protein Homology CDS 3887750 3888550 . - 0 ID=cds3367;Parent=gene3477;Dbxref=Genbank:WP_012105687.1;Name=WP_012105687.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105687.1;transl_table=11 NC_009708.1 RefSeq gene 3888865 3889479 . + . ID=gene3478;Name=YPSIP31758_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18590;old_locus_tag=YpsIP31758_3452 NC_009708.1 Protein Homology CDS 3888865 3889479 . + 0 ID=cds3368;Parent=gene3478;Dbxref=Genbank:WP_012105689.1;Name=WP_012105689.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_012105689.1;transl_table=11 NC_009708.1 RefSeq gene 3889705 3892938 . - . ID=gene3479;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18595;old_locus_tag=YpsIP31758_3453 NC_009708.1 Protein Homology CDS 3889705 3892938 . - 0 ID=cds3369;Parent=gene3479;Dbxref=Genbank:WP_011191702.1;Name=WP_011191702.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=WP_011191702.1;transl_table=11 NC_009708.1 RefSeq gene 3892954 3894129 . - . ID=gene3480;Name=YPSIP31758_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18600;old_locus_tag=YpsIP31758_3454 NC_009708.1 Protein Homology CDS 3892954 3894129 . - 0 ID=cds3370;Parent=gene3480;Dbxref=Genbank:WP_012105690.1;Name=WP_012105690.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl phosphate synthase small subunit;protein_id=WP_012105690.1;transl_table=11 NC_009708.1 RefSeq gene 3894602 3895423 . - . ID=gene3481;Name=YPSIP31758_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18605;old_locus_tag=YpsIP31758_3455 NC_009708.1 Protein Homology CDS 3894602 3895423 . - 0 ID=cds3371;Parent=gene3481;Dbxref=Genbank:WP_012105691.1;Name=WP_012105691.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_012105691.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3895795 3895925 . + . ID=id294;gbkey=repeat_region NC_009708.1 RefSeq gene 3895812 3895937 . - . ID=gene3482;Name=YPSIP31758_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18610;old_locus_tag=YpsIP31758_3456 NC_009708.1 Protein Homology CDS 3895812 3895937 . - 0 ID=cds3372;Parent=gene3482;Dbxref=Genbank:WP_002210505.1;Name=WP_002210505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210505.1;transl_table=11 NC_009708.1 RefSeq gene 3896005 3896958 . - . ID=gene3483;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YPSIP31758_RS18615;old_locus_tag=YpsIP31758_3457 NC_009708.1 Protein Homology CDS 3896005 3896958 . - 0 ID=cds3373;Parent=gene3483;Dbxref=Genbank:WP_012105692.1;Name=WP_012105692.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_012105692.1;transl_table=11 NC_009708.1 RefSeq gene 3896939 3897397 . - . ID=gene3484;Name=YPSIP31758_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18620;old_locus_tag=YpsIP31758_3458 NC_009708.1 Protein Homology CDS 3896939 3897397 . - 0 ID=cds3374;Parent=gene3484;Dbxref=Genbank:WP_012105693.1;Name=WP_012105693.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_012105693.1;transl_table=11 NC_009708.1 RefSeq gene 3897465 3897974 . - . ID=gene3485;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18625;old_locus_tag=YpsIP31758_3459 NC_009708.1 Protein Homology CDS 3897465 3897974 . - 0 ID=cds3375;Parent=gene3485;Dbxref=Genbank:WP_012105694.1;Name=WP_012105694.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_012105694.1;transl_table=11 NC_009708.1 RefSeq gene 3897974 3900790 . - . ID=gene3486;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18630;old_locus_tag=YpsIP31758_3460 NC_009708.1 Protein Homology CDS 3897974 3900790 . - 0 ID=cds3376;Parent=gene3486;Dbxref=Genbank:WP_012105695.1;Name=WP_012105695.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_012105695.1;transl_table=11 NC_009708.1 RefSeq gene 3900822 3901760 . - . ID=gene3487;Name=YPSIP31758_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18635;old_locus_tag=YpsIP31758_3461 NC_009708.1 Protein Homology CDS 3900822 3901760 . - 0 ID=cds3377;Parent=gene3487;Dbxref=Genbank:WP_002210510.1;Name=WP_002210510.1;gbkey=CDS;product=riboflavin biosynthesis protein RibF;protein_id=WP_002210510.1;transl_table=11 NC_009708.1 RefSeq gene 3901977 3902153 . + . ID=gene3488;Name=YPSIP31758_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18640 NC_009708.1 Protein Homology CDS 3901977 3902153 . + 0 ID=cds3378;Parent=gene3488;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11 NC_009708.1 RefSeq gene 3902175 3902438 . + . ID=gene3489;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18645;old_locus_tag=YpsIP31758_3462 NC_009708.1 Protein Homology CDS 3902175 3902438 . + 0 ID=cds3379;Parent=gene3489;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NC_009708.1 RefSeq gene 3902569 3903468 . - . ID=gene3490;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18650;old_locus_tag=YpsIP31758_3463 NC_009708.1 Protein Homology CDS 3902569 3903468 . - 0 ID=cds3380;Parent=gene3490;Dbxref=Genbank:WP_002220713.1;Name=WP_002220713.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_002220713.1;transl_table=11 NC_009708.1 RefSeq gene 3903598 3904782 . - . ID=gene3491;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18655;old_locus_tag=YpsIP31758_3464 NC_009708.1 Protein Homology CDS 3903598 3904782 . - 0 ID=cds3381;Parent=gene3491;Dbxref=Genbank:WP_012105696.1;Name=WP_012105696.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_012105696.1;transl_table=11 NC_009708.1 RefSeq gene 3905025 3906164 . - . ID=gene3492;Name=YPSIP31758_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18660;old_locus_tag=YpsIP31758_3465 NC_009708.1 Protein Homology CDS 3905025 3906164 . - 0 ID=cds3382;Parent=gene3492;Dbxref=Genbank:WP_012105697.1;Name=WP_012105697.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_012105697.1;transl_table=11 NC_009708.1 RefSeq gene 3906276 3908186 . - . ID=gene3493;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18665;old_locus_tag=YpsIP31758_3466 NC_009708.1 Protein Homology CDS 3906276 3908186 . - 0 ID=cds3383;Parent=gene3493;Dbxref=Genbank:WP_012105698.1;Name=WP_012105698.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_012105698.1;transl_table=11 NC_009708.1 RefSeq gene 3908560 3909171 . + . ID=gene3494;Name=YPSIP31758_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18670;old_locus_tag=YpsIP31758_3467 NC_009708.1 Protein Homology CDS 3908560 3909171 . + 0 ID=cds3384;Parent=gene3494;Dbxref=Genbank:WP_002209246.1;Name=WP_002209246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209246.1;transl_table=11 NC_009708.1 RefSeq gene 3909461 3911908 . + . ID=gene3495;Name=YPSIP31758_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18675;old_locus_tag=YpsIP31758_3468 NC_009708.1 Protein Homology CDS 3909461 3911908 . + 0 ID=cds3385;Parent=gene3495;Dbxref=Genbank:WP_012105699.1;Name=WP_012105699.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_012105699.1;transl_table=11 NC_009708.1 RefSeq gene 3911987 3913366 . - . ID=gene3496;Name=YPSIP31758_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18680;old_locus_tag=YpsIP31758_3469 NC_009708.1 Protein Homology CDS 3911987 3913366 . - 0 ID=cds3386;Parent=gene3496;Dbxref=Genbank:WP_012105700.1;Name=WP_012105700.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012105700.1;transl_table=11 NC_009708.1 RefSeq gene 3913494 3914081 . - . ID=gene3497;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18685;old_locus_tag=YpsIP31758_3470 NC_009708.1 Protein Homology CDS 3913494 3914081 . - 0 ID=cds3387;Parent=gene3497;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11 NC_009708.1 RefSeq gene 3914369 3915322 . - . ID=gene3498;Name=YPSIP31758_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18690;old_locus_tag=YpsIP31758_3472 NC_009708.1 Protein Homology CDS 3914369 3915322 . - 0 ID=cds3388;Parent=gene3498;Dbxref=Genbank:WP_002209241.1;Name=WP_002209241.1;gbkey=CDS;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NC_009708.1 RefSeq gene 3915854 3916630 . + . ID=gene3499;Name=YPSIP31758_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18695;old_locus_tag=YpsIP31758_3473 NC_009708.1 Protein Homology CDS 3915854 3916630 . + 0 ID=cds3389;Parent=gene3499;Dbxref=Genbank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209240.1;transl_table=11 NC_009708.1 RefSeq gene 3917446 3918735 . - . ID=gene3500;Name=YPSIP31758_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18700;old_locus_tag=YpsIP31758_3474 NC_009708.1 Protein Homology CDS 3917446 3918735 . - 0 ID=cds3390;Parent=gene3500;Dbxref=Genbank:WP_012105702.1;Name=WP_012105702.1;gbkey=CDS;product=threonine synthase;protein_id=WP_012105702.1;transl_table=11 NC_009708.1 RefSeq gene 3918739 3919668 . - . ID=gene3501;Name=YPSIP31758_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18705;old_locus_tag=YpsIP31758_3475 NC_009708.1 Protein Homology CDS 3918739 3919668 . - 0 ID=cds3391;Parent=gene3501;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NC_009708.1 RefSeq gene 3919671 3922130 . - . ID=gene3502;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18710;old_locus_tag=YpsIP31758_3476 NC_009708.1 Protein Homology CDS 3919671 3922130 . - 0 ID=cds3392;Parent=gene3502;Dbxref=Genbank:WP_012105703.1;Name=WP_012105703.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=WP_012105703.1;transl_table=11 NC_009708.1 RefSeq gene 3923234 3923950 . + . ID=gene3503;Name=YPSIP31758_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18715;old_locus_tag=YpsIP31758_3478 NC_009708.1 Protein Homology CDS 3923234 3923950 . + 0 ID=cds3393;Parent=gene3503;Dbxref=Genbank:WP_012105704.1;Name=WP_012105704.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_012105704.1;transl_table=11 NC_009708.1 RefSeq gene 3924124 3924591 . - . ID=gene3504;Name=YPSIP31758_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18720;old_locus_tag=YpsIP31758_3479 NC_009708.1 Protein Homology CDS 3924124 3924591 . - 0 ID=cds3394;Parent=gene3504;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11 NC_009708.1 RefSeq gene 3924817 3925683 . + . ID=gene3505;Name=YPSIP31758_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18725;old_locus_tag=YpsIP31758_3481 NC_009708.1 Protein Homology CDS 3924817 3925683 . + 0 ID=cds3395;Parent=gene3505;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11 NC_009708.1 RefSeq gene 3925680 3926327 . - . ID=gene3506;Name=YPSIP31758_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18730;old_locus_tag=YpsIP31758_3480 NC_009708.1 Protein Homology CDS 3925680 3926327 . - 0 ID=cds3396;Parent=gene3506;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NC_009708.1 RefSeq gene 3926437 3926979 . + . ID=gene3507;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18735;old_locus_tag=YpsIP31758_3483 NC_009708.1 Protein Homology CDS 3926437 3926979 . + 0 ID=cds3397;Parent=gene3507;Dbxref=Genbank:WP_012105705.1;Name=WP_012105705.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_012105705.1;transl_table=11 NC_009708.1 RefSeq gene 3926976 3927368 . - . ID=gene3508;Name=YPSIP31758_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18740;old_locus_tag=YpsIP31758_3482 NC_009708.1 Protein Homology CDS 3926976 3927368 . - 0 ID=cds3398;Parent=gene3508;Dbxref=Genbank:WP_012105706.1;Name=WP_012105706.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_012105706.1;transl_table=11 NC_009708.1 RefSeq gene 3927605 3929524 . - . ID=gene3509;Name=YPSIP31758_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18745;old_locus_tag=YpsIP31758_3484 NC_009708.1 Protein Homology CDS 3927605 3929524 . - 0 ID=cds3399;Parent=gene3509;Dbxref=Genbank:WP_011191694.1;Name=WP_011191694.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_011191694.1;transl_table=11 NC_009708.1 RefSeq gene 3930094 3932820 . + . ID=gene3510;Name=YPSIP31758_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18750;old_locus_tag=YpsIP31758_3485 NC_009708.1 Protein Homology CDS 3930094 3932820 . + 0 ID=cds3400;Parent=gene3510;Dbxref=Genbank:WP_011191693.1;Name=WP_011191693.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_011191693.1;transl_table=11 NC_009708.1 RefSeq gene 3933186 3933809 . + . ID=gene3511;Name=YPSIP31758_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18755;old_locus_tag=YpsIP31758_3486 NC_009708.1 Protein Homology CDS 3933186 3933809 . + 0 ID=cds3401;Parent=gene3511;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11 NC_009708.1 RefSeq gene 3933806 3935107 . + . ID=gene3512;Name=YPSIP31758_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18760;old_locus_tag=YpsIP31758_3487 NC_009708.1 Protein Homology CDS 3933806 3935107 . + 0 ID=cds3402;Parent=gene3512;Dbxref=Genbank:WP_002209224.1;Name=WP_002209224.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209224.1;transl_table=11 NC_009708.1 RefSeq gene 3935113 3935619 . + . ID=gene3513;Name=YPSIP31758_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18765;old_locus_tag=YpsIP31758_3488 NC_009708.1 Protein Homology CDS 3935113 3935619 . + 0 ID=cds3403;Parent=gene3513;Dbxref=Genbank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215967.1;transl_table=11 NC_009708.1 RefSeq gene 3935802 3937469 . + . ID=gene3514;Name=YPSIP31758_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18770;old_locus_tag=YpsIP31758_3489 NC_009708.1 Protein Homology CDS 3935802 3937469 . + 0 ID=cds3404;Parent=gene3514;Dbxref=Genbank:WP_011191691.1;Name=WP_011191691.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_011191691.1;transl_table=11 NC_009708.1 RefSeq gene 3937615 3938745 . - . ID=gene3515;Name=YPSIP31758_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18775;old_locus_tag=YpsIP31758_3490 NC_009708.1 Protein Homology CDS 3937615 3938745 . - 0 ID=cds3405;Parent=gene3515;Dbxref=Genbank:WP_011191690.1;Name=WP_011191690.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_011191690.1;transl_table=11 NC_009708.1 RefSeq gene 3938902 3940173 . - . ID=gene3516;Name=YPSIP31758_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18780;old_locus_tag=YpsIP31758_3491 NC_009708.1 Protein Homology CDS 3938902 3940173 . - 0 ID=cds3406;Parent=gene3516;Dbxref=Genbank:WP_012105707.1;Name=WP_012105707.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105707.1;transl_table=11 NC_009708.1 RefSeq gene 3940332 3941714 . - . ID=gene3517;Name=YPSIP31758_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18785;old_locus_tag=YpsIP31758_3492 NC_009708.1 Protein Homology CDS 3940332 3941714 . - 0 ID=cds3407;Parent=gene3517;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NC_009708.1 RefSeq gene 3941817 3942797 . - . ID=gene3518;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18790;old_locus_tag=YpsIP31758_3493 NC_009708.1 Protein Homology CDS 3941817 3942797 . - 0 ID=cds3408;Parent=gene3518;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NC_009708.1 RefSeq gene 3943031 3943732 . + . ID=gene3519;Name=YPSIP31758_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18795;old_locus_tag=YpsIP31758_3494 NC_009708.1 Protein Homology CDS 3943031 3943732 . + 0 ID=cds3409;Parent=gene3519;Dbxref=Genbank:WP_012105708.1;Name=WP_012105708.1;gbkey=CDS;product=gluconolaconase;protein_id=WP_012105708.1;transl_table=11 NC_009708.1 RefSeq gene 3943844 3944563 . - . ID=gene3520;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18800;old_locus_tag=YpsIP31758_3495 NC_009708.1 Protein Homology CDS 3943844 3944563 . - 0 ID=cds3410;Parent=gene3520;Dbxref=Genbank:WP_011191689.1;Name=WP_011191689.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_011191689.1;transl_table=11 NC_009708.1 RefSeq gene 3944688 3945911 . - . ID=gene3521;Name=YPSIP31758_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18805;old_locus_tag=YpsIP31758_3496 NC_009708.1 Protein Homology CDS 3944688 3945911 . - 0 ID=cds3411;Parent=gene3521;Dbxref=Genbank:WP_011191688.1;Name=WP_011191688.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_011191688.1;transl_table=11 NC_009708.1 RefSeq gene 3946043 3947365 . - . ID=gene3522;Name=YPSIP31758_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18810;old_locus_tag=YpsIP31758_3497 NC_009708.1 Protein Homology CDS 3946043 3947365 . - 0 ID=cds3412;Parent=gene3522;Dbxref=Genbank:WP_011191687.1;Name=WP_011191687.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_011191687.1;transl_table=11 NC_009708.1 RefSeq gene 3947486 3948283 . - . ID=gene3523;Name=YPSIP31758_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18815;old_locus_tag=YpsIP31758_3498 NC_009708.1 Protein Homology CDS 3947486 3948283 . - 0 ID=cds3413;Parent=gene3523;Dbxref=Genbank:WP_002216078.1;Name=WP_002216078.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase 2;protein_id=WP_002216078.1;transl_table=11 NC_009708.1 RefSeq gene 3948904 3950181 . - . ID=gene3524;Name=YPSIP31758_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18820;old_locus_tag=YpsIP31758_3499 NC_009708.1 Protein Homology CDS 3948904 3950181 . - 0 ID=cds3414;Parent=gene3524;Dbxref=Genbank:WP_032466618.1;Name=WP_032466618.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_032466618.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3950347 3950518 . + . ID=id295;gbkey=repeat_region NC_009708.1 RefSeq gene 3950710 3951498 . - . ID=gene3525;Name=YPSIP31758_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18825;old_locus_tag=YpsIP31758_3500 NC_009708.1 Protein Homology CDS 3950710 3951498 . - 0 ID=cds3415;Parent=gene3525;Dbxref=Genbank:WP_011191685.1;Name=WP_011191685.1;gbkey=CDS;product=DNAse;protein_id=WP_011191685.1;transl_table=11 NC_009708.1 RefSeq gene 3951535 3952806 . - . ID=gene3526;Name=YPSIP31758_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18830;old_locus_tag=YpsIP31758_3501 NC_009708.1 Protein Homology CDS 3951535 3952806 . - 0 ID=cds3416;Parent=gene3526;Dbxref=Genbank:WP_024063094.1;Name=WP_024063094.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063094.1;transl_table=11 NC_009708.1 RefSeq gene 3952880 3953041 . - . ID=gene3527;Name=YPSIP31758_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18835;old_locus_tag=YpsIP31758_3502 NC_009708.1 Protein Homology CDS 3952880 3953041 . - 0 ID=cds3417;Parent=gene3527;Dbxref=Genbank:WP_011191683.1;Name=WP_011191683.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191683.1;transl_table=11 NC_009708.1 RefSeq gene 3953208 3953822 . - . ID=gene3528;Name=YPSIP31758_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18840;old_locus_tag=YpsIP31758_3503 NC_009708.1 Protein Homology CDS 3953208 3953822 . - 0 ID=cds3418;Parent=gene3528;Dbxref=Genbank:WP_011191682.1;Name=WP_011191682.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191682.1;transl_table=11 NC_009708.1 RefSeq gene 3954150 3955739 . - . ID=gene3529;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18845;old_locus_tag=YpsIP31758_3504 NC_009708.1 Protein Homology CDS 3954150 3955739 . - 0 ID=cds3419;Parent=gene3529;Dbxref=Genbank:WP_011191681.1;Name=WP_011191681.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_011191681.1;transl_table=11 NC_009708.1 RefSeq gene 3955917 3956360 . - . ID=gene3530;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18850;old_locus_tag=YpsIP31758_3505 NC_009708.1 Protein Homology CDS 3955917 3956360 . - 0 ID=cds3420;Parent=gene3530;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NC_009708.1 RefSeq gene 3956305 3956742 . - . ID=gene3531;Name=YPSIP31758_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18855;old_locus_tag=YpsIP31758_3506 NC_009708.1 Protein Homology CDS 3956305 3956742 . - 0 ID=cds3421;Parent=gene3531;Dbxref=Genbank:WP_011191680.1;Name=WP_011191680.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_011191680.1;transl_table=11 NC_009708.1 RefSeq gene 3956855 3957898 . + . ID=gene3532;Name=YPSIP31758_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18860;old_locus_tag=YpsIP31758_3507 NC_009708.1 Protein Homology CDS 3956855 3957898 . + 0 ID=cds3422;Parent=gene3532;Dbxref=Genbank:WP_002209206.1;Name=WP_002209206.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase C;protein_id=WP_002209206.1;transl_table=11 NC_009708.1 RefSeq gene 3958156 3958242 . + . ID=gene3533;Name=YPSIP31758_RS18865;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS18865;old_locus_tag=YpsIP31758_4272 NC_009708.1 tRNAscan-SE tRNA 3958156 3958242 . + . ID=rna103;Parent=gene3533;anticodon=(pos:3958190..3958192);gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 3958156 3958242 . + . ID=id296;Parent=rna103;anticodon=(pos:3958190..3958192);gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 3958339 3958425 . + . ID=gene3534;Name=YPSIP31758_RS18870;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS18870;old_locus_tag=YpsIP31758_4273 NC_009708.1 tRNAscan-SE tRNA 3958339 3958425 . + . ID=rna104;Parent=gene3534;anticodon=(pos:3958373..3958375);gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 3958339 3958425 . + . ID=id297;Parent=rna104;anticodon=(pos:3958373..3958375);gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 3958539 3958625 . + . ID=gene3535;Name=YPSIP31758_RS18875;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS18875;old_locus_tag=YpsIP31758_4274 NC_009708.1 tRNAscan-SE tRNA 3958539 3958625 . + . ID=rna105;Parent=gene3535;anticodon=(pos:3958573..3958575);gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 3958539 3958625 . + . ID=id298;Parent=rna105;anticodon=(pos:3958573..3958575);gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 3958795 3959127 . - . ID=gene3536;Name=YPSIP31758_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18880 NC_009708.1 Protein Homology CDS 3958795 3959127 . - 0 ID=cds3423;Parent=gene3536;Dbxref=Genbank:WP_012413464.1;Name=WP_012413464.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413464.1;transl_table=11 NC_009708.1 RefSeq gene 3959376 3960530 . + . ID=gene3537;Name=YPSIP31758_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18885;old_locus_tag=YpsIP31758_3509 NC_009708.1 Protein Homology CDS 3959376 3960530 . + 0 ID=cds3424;Parent=gene3537;Dbxref=Genbank:WP_012105710.1;Name=WP_012105710.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_012105710.1;transl_table=11 NC_009708.1 RefSeq gene 3961106 3962191 . - . ID=gene3538;Name=YPSIP31758_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18890;old_locus_tag=YpsIP31758_3511 NC_009708.1 Protein Homology CDS 3961106 3962191 . - 0 ID=cds3425;Parent=gene3538;Dbxref=Genbank:WP_012105712.1;Name=WP_012105712.1;gbkey=CDS;product=pectinesterase;protein_id=WP_012105712.1;transl_table=11 NC_009708.1 RefSeq gene 3962524 3962847 . + . ID=gene3539;Name=YPSIP31758_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18895 NC_009708.1 Protein Homology CDS 3962524 3962847 . + 0 ID=cds3426;Parent=gene3539;Dbxref=Genbank:WP_042592862.1;Name=WP_042592862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592862.1;transl_table=11 NC_009708.1 RefSeq gene 3963030 3963326 . + . ID=gene3540;Name=YPSIP31758_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18900 NC_009708.1 Protein Homology CDS 3963030 3963326 . + 0 ID=cds3427;Parent=gene3540;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NC_009708.1 RefSeq gene 3963460 3963652 . + . ID=gene3541;Name=YPSIP31758_RS18905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS18905;pseudo=true NC_009708.1 Protein Homology CDS 3963460 3963652 . + 0 ID=cds3428;Parent=gene3541;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 3963688 3966774 . - . ID=gene3542;Name=YPSIP31758_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18910;old_locus_tag=YpsIP31758_3512 NC_009708.1 Protein Homology CDS 3963688 3966774 . - 0 ID=cds3429;Parent=gene3542;Dbxref=Genbank:WP_011191676.1;Name=WP_011191676.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_011191676.1;transl_table=11 NC_009708.1 RefSeq gene 3966774 3967856 . - . ID=gene3543;Name=YPSIP31758_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18915;old_locus_tag=YpsIP31758_3513 NC_009708.1 Protein Homology CDS 3966774 3967856 . - 0 ID=cds3430;Parent=gene3543;Dbxref=Genbank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209199.1;transl_table=11 NC_009708.1 RefSeq gene 3967908 3968141 . - . ID=gene3544;Name=YPSIP31758_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18920;old_locus_tag=YpsIP31758_3514 NC_009708.1 Protein Homology CDS 3967908 3968141 . - 0 ID=cds3431;Parent=gene3544;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11 NC_009708.1 RefSeq gene 3968168 3968365 . - . ID=gene3545;Name=YPSIP31758_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22595 NC_009708.1 Protein Homology CDS 3968168 3968365 . - 0 ID=cds3432;Parent=gene3545;Dbxref=Genbank:WP_049756387.1;Name=WP_049756387.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756387.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3968763 3968931 . + . ID=id299;gbkey=repeat_region NC_009708.1 RefSeq gene 3968951 3970183 . - . ID=gene3546;Name=YPSIP31758_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18930;old_locus_tag=YpsIP31758_3515 NC_009708.1 Protein Homology CDS 3968951 3970183 . - 0 ID=cds3433;Parent=gene3546;Dbxref=Genbank:WP_002209197.1;Name=WP_002209197.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_002209197.1;transl_table=11 NC_009708.1 RefSeq gene 3970231 3971394 . - . ID=gene3547;Name=YPSIP31758_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18935;old_locus_tag=YpsIP31758_3516 NC_009708.1 Protein Homology CDS 3970231 3971394 . - 0 ID=cds3434;Parent=gene3547;Dbxref=Genbank:WP_012105713.1;Name=WP_012105713.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_012105713.1;transl_table=11 NC_009708.1 RefSeq gene 3971740 3973332 . - . ID=gene3548;Name=YPSIP31758_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18940;old_locus_tag=YpsIP31758_3518 NC_009708.1 Protein Homology CDS 3971740 3973332 . - 0 ID=cds3435;Parent=gene3548;Dbxref=Genbank:WP_002230543.1;Name=WP_002230543.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002230543.1;transl_table=11 NC_009708.1 RefSeq gene 3973503 3974495 . - . ID=gene3549;Name=YPSIP31758_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18945;old_locus_tag=YpsIP31758_3519 NC_009708.1 Protein Homology CDS 3973503 3974495 . - 0 ID=cds3436;Parent=gene3549;Dbxref=Genbank:WP_041175892.1;Name=WP_041175892.1;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;gbkey=CDS;product=LsrR family transcriptional regulator;protein_id=WP_041175892.1;transl_table=11 NC_009708.1 RefSeq gene 3974504 3974716 . + . ID=gene3550;Name=YPSIP31758_RS18950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS18950;pseudo=true NC_009708.1 Protein Homology CDS 3974504 3974716 . + 0 ID=cds3437;Parent=gene3550;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3974552..3974554%2Caa:Other);transl_table=11 NC_009708.1 RefSeq gene 3974826 3976409 . + . ID=gene3551;Name=YPSIP31758_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18955;old_locus_tag=YpsIP31758_3521 NC_009708.1 Protein Homology CDS 3974826 3976409 . + 0 ID=cds3438;Parent=gene3551;Dbxref=Genbank:WP_012105714.1;Name=WP_012105714.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_012105714.1;transl_table=11 NC_009708.1 RefSeq gene 3976403 3977458 . + . ID=gene3552;Name=YPSIP31758_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18960;old_locus_tag=YpsIP31758_3522 NC_009708.1 Protein Homology CDS 3976403 3977458 . + 0 ID=cds3439;Parent=gene3552;Dbxref=Genbank:WP_012105715.1;Name=WP_012105715.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_012105715.1;transl_table=11 NC_009708.1 RefSeq gene 3977455 3978456 . + . ID=gene3553;Name=YPSIP31758_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18965;old_locus_tag=YpsIP31758_3523 NC_009708.1 Protein Homology CDS 3977455 3978456 . + 0 ID=cds3440;Parent=gene3553;Dbxref=Genbank:WP_012105716.1;Name=WP_012105716.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_012105716.1;transl_table=11 NC_009708.1 RefSeq gene 3978501 3979520 . + . ID=gene3554;Name=YPSIP31758_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18970;old_locus_tag=YpsIP31758_3524 NC_009708.1 Protein Homology CDS 3978501 3979520 . + 0 ID=cds3441;Parent=gene3554;Dbxref=Genbank:WP_012105717.1;Name=WP_012105717.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_012105717.1;transl_table=11 NC_009708.1 RefSeq gene 3979576 3980451 . + . ID=gene3555;Name=YPSIP31758_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18975;old_locus_tag=YpsIP31758_3525 NC_009708.1 Protein Homology CDS 3979576 3980451 . + 0 ID=cds3442;Parent=gene3555;Dbxref=Genbank:WP_011191661.1;Name=WP_011191661.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_011191661.1;transl_table=11 NC_009708.1 RefSeq gene 3980516 3980806 . + . ID=gene3556;Name=YPSIP31758_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18980;old_locus_tag=YpsIP31758_3526 NC_009708.1 Protein Homology CDS 3980516 3980806 . + 0 ID=cds3443;Parent=gene3556;Dbxref=Genbank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002209186.1;transl_table=11 NC_009708.1 RefSeq gene 3981129 3981620 . + . ID=gene3557;Name=YPSIP31758_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18985;old_locus_tag=YpsIP31758_3527 NC_009708.1 Protein Homology CDS 3981129 3981620 . + 0 ID=cds3444;Parent=gene3557;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11 NC_009708.1 RefSeq gene 3981682 3984258 . - . ID=gene3558;Name=YPSIP31758_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18990;old_locus_tag=YpsIP31758_3528 NC_009708.1 Protein Homology CDS 3981682 3984258 . - 0 ID=cds3445;Parent=gene3558;Dbxref=Genbank:WP_012105718.1;Name=WP_012105718.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_012105718.1;transl_table=11 NC_009708.1 RefSeq gene 3984623 3985705 . + . ID=gene3559;Name=YPSIP31758_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS18995;old_locus_tag=YpsIP31758_3529 NC_009708.1 Protein Homology CDS 3984623 3985705 . + 0 ID=cds3446;Parent=gene3559;Dbxref=Genbank:WP_011191659.1;Name=WP_011191659.1;gbkey=CDS;product=PTS fructose transporter subunit IIC;protein_id=WP_011191659.1;transl_table=11 NC_009708.1 RefSeq repeat_region 3985747 3985962 . + . ID=id300;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 3985968 3986183 . + . ID=id301;gbkey=repeat_region NC_009708.1 RefSeq gene 3986269 3986589 . + . ID=gene3560;Name=YPSIP31758_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19000;old_locus_tag=YpsIP31758_3530 NC_009708.1 Protein Homology CDS 3986269 3986589 . + 0 ID=cds3447;Parent=gene3560;Dbxref=Genbank:WP_002209181.1;Name=WP_002209181.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NC_009708.1 RefSeq gene 3986682 3987026 . + . ID=gene3561;Name=YPSIP31758_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19005;old_locus_tag=YpsIP31758_3532 NC_009708.1 Protein Homology CDS 3986682 3987026 . + 0 ID=cds3448;Parent=gene3561;Dbxref=Genbank:WP_002209180.1;Name=WP_002209180.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11 NC_009708.1 RefSeq gene 3987019 3987894 . - . ID=gene3562;Name=YPSIP31758_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19010;old_locus_tag=YpsIP31758_3531 NC_009708.1 Protein Homology CDS 3987019 3987894 . - 0 ID=cds3449;Parent=gene3562;Dbxref=Genbank:WP_002209179.1;Name=WP_002209179.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209179.1;transl_table=11 NC_009708.1 RefSeq gene 3987896 3988432 . - . ID=gene3563;Name=YPSIP31758_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19015;old_locus_tag=YpsIP31758_3533 NC_009708.1 Protein Homology CDS 3987896 3988432 . - 0 ID=cds3450;Parent=gene3563;Dbxref=Genbank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11 NC_009708.1 RefSeq gene 3989138 3990334 . + . ID=gene3564;Name=YPSIP31758_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19020;old_locus_tag=YpsIP31758_3534 NC_009708.1 Protein Homology CDS 3989138 3990334 . + 0 ID=cds3451;Parent=gene3564;Dbxref=Genbank:WP_011191657.1;Name=WP_011191657.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191657.1;transl_table=11 NC_009708.1 RefSeq gene 3990363 3991409 . + . ID=gene3565;Name=YPSIP31758_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19025;old_locus_tag=YpsIP31758_3535 NC_009708.1 Protein Homology CDS 3990363 3991409 . + 0 ID=cds3452;Parent=gene3565;Dbxref=Genbank:WP_002209176.1;Name=WP_002209176.1;gbkey=CDS;product=peptidase M48;protein_id=WP_002209176.1;transl_table=11 NC_009708.1 RefSeq gene 3991753 3994344 . + . ID=gene3566;Name=YPSIP31758_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19030;old_locus_tag=YpsIP31758_3536 NC_009708.1 Protein Homology CDS 3991753 3994344 . + 0 ID=cds3453;Parent=gene3566;Dbxref=Genbank:WP_012105719.1;Name=WP_012105719.1;gbkey=CDS;product=type I restriction-modification protein subunit M;protein_id=WP_012105719.1;transl_table=11 NC_009708.1 RefSeq gene 3994346 3995605 . + . ID=gene3567;Name=YPSIP31758_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22600;old_locus_tag=YpsIP31758_3537 NC_009708.1 Protein Homology CDS 3994346 3995605 . + 0 ID=cds3454;Parent=gene3567;Dbxref=Genbank:WP_012105720.1;Name=WP_012105720.1;gbkey=CDS;product=type I restriction endonuclease subunit S;protein_id=WP_012105720.1;transl_table=11 NC_009708.1 RefSeq gene 3995615 3998863 . + . ID=gene3568;Name=YPSIP31758_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19040;old_locus_tag=YpsIP31758_3538 NC_009708.1 Protein Homology CDS 3995615 3998863 . + 0 ID=cds3455;Parent=gene3568;Dbxref=Genbank:WP_012105721.1;Name=WP_012105721.1;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=WP_012105721.1;transl_table=11 NC_009708.1 RefSeq gene 3999113 4000379 . - . ID=gene3569;Name=YPSIP31758_RS19045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS19045;old_locus_tag=YpsIP31758_3540;pseudo=true NC_009708.1 Protein Homology CDS 3999113 4000379 . - 0 ID=cds3456;Parent=gene3569;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 4000578 4000662 . - . ID=gene3570;Name=YPSIP31758_RS19050;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS19050;old_locus_tag=YpsIP31758_4275 NC_009708.1 tRNAscan-SE tRNA 4000578 4000662 . - . ID=rna106;Parent=gene3570;anticodon=(pos:complement(4000626..4000628));gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 4000578 4000662 . - . ID=id302;Parent=rna106;anticodon=(pos:complement(4000626..4000628));gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 4000767 4001843 . - . ID=gene3571;Name=YPSIP31758_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19055;old_locus_tag=YpsIP31758_3541 NC_009708.1 Protein Homology CDS 4000767 4001843 . - 0 ID=cds3457;Parent=gene3571;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NC_009708.1 RefSeq gene 4001843 4002937 . - . ID=gene3572;Name=YPSIP31758_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19060;old_locus_tag=YpsIP31758_3542 NC_009708.1 Protein Homology CDS 4001843 4002937 . - 0 ID=cds3458;Parent=gene3572;Dbxref=Genbank:WP_002209311.1;Name=WP_002209311.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NC_009708.1 RefSeq gene 4003217 4004728 . + . ID=gene3573;Name=YPSIP31758_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19065;old_locus_tag=YpsIP31758_3543 NC_009708.1 Protein Homology CDS 4003217 4004728 . + 0 ID=cds3459;Parent=gene3573;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NC_009708.1 RefSeq gene 4004879 4005328 . + . ID=gene3574;Name=YPSIP31758_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19070;old_locus_tag=YpsIP31758_3544 NC_009708.1 Protein Homology CDS 4004879 4005328 . + 0 ID=cds3460;Parent=gene3574;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NC_009708.1 RefSeq gene 4005341 4008238 . + . ID=gene3575;Name=YPSIP31758_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19075;old_locus_tag=YpsIP31758_3545 NC_009708.1 Protein Homology CDS 4005341 4008238 . + 0 ID=cds3461;Parent=gene3575;Dbxref=Genbank:WP_011191653.1;Name=WP_011191653.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_011191653.1;transl_table=11 NC_009708.1 RefSeq gene 4008381 4008884 . + . ID=gene3576;Name=YPSIP31758_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19080;old_locus_tag=YpsIP31758_3546 NC_009708.1 Protein Homology CDS 4008381 4008884 . + 0 ID=cds3462;Parent=gene3576;Dbxref=Genbank:WP_011191652.1;Name=WP_011191652.1;gbkey=CDS;product=N-acetyltransferase;protein_id=WP_011191652.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4008936 4009051 . + . ID=id303;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4009085 4009199 . + . ID=id304;gbkey=repeat_region NC_009708.1 RefSeq gene 4009243 4009674 . - . ID=gene3577;Name=YPSIP31758_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19085;old_locus_tag=YpsIP31758_3548 NC_009708.1 Protein Homology CDS 4009243 4009674 . - 0 ID=cds3463;Parent=gene3577;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11 NC_009708.1 RefSeq gene 4009885 4010892 . + . ID=gene3578;Name=YPSIP31758_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19090;old_locus_tag=YpsIP31758_3549 NC_009708.1 Protein Homology CDS 4009885 4010892 . + 0 ID=cds3464;Parent=gene3578;Dbxref=Genbank:WP_012105725.1;Name=WP_012105725.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_012105725.1;transl_table=11 NC_009708.1 RefSeq gene 4011155 4011613 . - . ID=gene3579;Name=YPSIP31758_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19095;old_locus_tag=YpsIP31758_3550 NC_009708.1 Protein Homology CDS 4011155 4011613 . - 0 ID=cds3465;Parent=gene3579;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4011653 4011783 . + . ID=id305;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4011886 4012055 . + . ID=id306;gbkey=repeat_region NC_009708.1 RefSeq gene 4012251 4013819 . + . ID=gene3580;Name=YPSIP31758_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19100;old_locus_tag=YpsIP31758_3551 NC_009708.1 Protein Homology CDS 4012251 4013819 . + 0 ID=cds3466;Parent=gene3580;Dbxref=Genbank:WP_012105726.1;Name=WP_012105726.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012105726.1;transl_table=11 NC_009708.1 RefSeq gene 4013915 4014964 . + . ID=gene3581;Name=YPSIP31758_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19105;old_locus_tag=YpsIP31758_3552 NC_009708.1 Protein Homology CDS 4013915 4014964 . + 0 ID=cds3467;Parent=gene3581;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NC_009708.1 RefSeq gene 4014983 4015819 . + . ID=gene3582;Name=YPSIP31758_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19110;old_locus_tag=YpsIP31758_3553 NC_009708.1 Protein Homology CDS 4014983 4015819 . + 0 ID=cds3468;Parent=gene3582;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NC_009708.1 RefSeq gene 4015812 4016690 . + . ID=gene3583;Name=YPSIP31758_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19115;old_locus_tag=YpsIP31758_3554 NC_009708.1 Protein Homology CDS 4015812 4016690 . + 0 ID=cds3469;Parent=gene3583;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NC_009708.1 RefSeq gene 4016677 4017393 . + . ID=gene3584;Name=YPSIP31758_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19120;old_locus_tag=YpsIP31758_3555 NC_009708.1 Protein Homology CDS 4016677 4017393 . + 0 ID=cds3470;Parent=gene3584;Dbxref=Genbank:WP_012105727.1;Name=WP_012105727.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_012105727.1;transl_table=11 NC_009708.1 RefSeq gene 4017827 4019965 . + . ID=gene3585;Name=YPSIP31758_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19125;old_locus_tag=YpsIP31758_3556 NC_009708.1 Protein Homology CDS 4017827 4019965 . + 0 ID=cds3471;Parent=gene3585;Dbxref=Genbank:WP_002209296.1;Name=WP_002209296.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NC_009708.1 RefSeq gene 4020142 4020606 . + . ID=gene3586;Name=YPSIP31758_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19130;old_locus_tag=YpsIP31758_3557 NC_009708.1 Protein Homology CDS 4020142 4020606 . + 0 ID=cds3472;Parent=gene3586;Dbxref=Genbank:WP_025470743.1;Name=WP_025470743.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_025470743.1;transl_table=11 NC_009708.1 RefSeq gene 4020966 4021691 . + . ID=gene3587;Name=YPSIP31758_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19135;old_locus_tag=YpsIP31758_3559 NC_009708.1 Protein Homology CDS 4020966 4021691 . + 0 ID=cds3473;Parent=gene3587;Dbxref=Genbank:WP_012105729.1;Name=WP_012105729.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_012105729.1;transl_table=11 NC_009708.1 RefSeq gene 4021692 4022168 . + . ID=gene3588;Name=YPSIP31758_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19140;old_locus_tag=YpsIP31758_3560 NC_009708.1 Protein Homology CDS 4021692 4022168 . + 0 ID=cds3474;Parent=gene3588;Dbxref=Genbank:WP_012105730.1;Name=WP_012105730.1;gbkey=CDS;product=phosphonate metabolism protein PhnG;protein_id=WP_012105730.1;transl_table=11 NC_009708.1 RefSeq gene 4022168 4022794 . + . ID=gene3589;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19145;old_locus_tag=YpsIP31758_3561 NC_009708.1 Protein Homology CDS 4022168 4022794 . + 0 ID=cds3475;Parent=gene3589;Dbxref=Genbank:WP_002209291.1;Name=WP_002209291.1;gbkey=CDS;gene=phnH;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_002209291.1;transl_table=11 NC_009708.1 RefSeq gene 4022794 4023954 . + . ID=gene3590;Name=YPSIP31758_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19150;old_locus_tag=YpsIP31758_3562 NC_009708.1 Protein Homology CDS 4022794 4023954 . + 0 ID=cds3476;Parent=gene3590;Dbxref=Genbank:WP_012105731.1;Name=WP_012105731.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_012105731.1;transl_table=11 NC_009708.1 RefSeq gene 4023947 4024828 . + . ID=gene3591;Name=YPSIP31758_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19155;old_locus_tag=YpsIP31758_3563 NC_009708.1 Protein Homology CDS 4023947 4024828 . + 0 ID=cds3477;Parent=gene3591;Dbxref=Genbank:WP_011191646.1;Name=WP_011191646.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_011191646.1;transl_table=11 NC_009708.1 RefSeq gene 4024828 4025619 . + . ID=gene3592;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19160;old_locus_tag=YpsIP31758_3564 NC_009708.1 Protein Homology CDS 4024828 4025619 . + 0 ID=cds3478;Parent=gene3592;Dbxref=Genbank:WP_041175794.1;Name=WP_041175794.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_041175794.1;transl_table=11 NC_009708.1 RefSeq gene 4026008 4026727 . + . ID=gene3593;Name=YPSIP31758_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19165;old_locus_tag=YpsIP31758_3565 NC_009708.1 Protein Homology CDS 4026008 4026727 . + 0 ID=cds3479;Parent=gene3593;Dbxref=Genbank:WP_012105733.1;Name=WP_012105733.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_012105733.1;transl_table=11 NC_009708.1 RefSeq gene 4026724 4027860 . + . ID=gene3594;Name=YPSIP31758_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19170;old_locus_tag=YpsIP31758_3566 NC_009708.1 Protein Homology CDS 4026724 4027860 . + 0 ID=cds3480;Parent=gene3594;Dbxref=Genbank:WP_012105734.1;Name=WP_012105734.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_012105734.1;transl_table=11 NC_009708.1 RefSeq gene 4027860 4028441 . + . ID=gene3595;Name=YPSIP31758_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19175;old_locus_tag=YpsIP31758_3567 NC_009708.1 Protein Homology CDS 4027860 4028441 . + 0 ID=cds3481;Parent=gene3595;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11 NC_009708.1 RefSeq gene 4028432 4029184 . + . ID=gene3596;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19180;old_locus_tag=YpsIP31758_3568 NC_009708.1 Protein Homology CDS 4028432 4029184 . + 0 ID=cds3482;Parent=gene3596;Dbxref=Genbank:WP_012105735.1;Name=WP_012105735.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_012105735.1;transl_table=11 NC_009708.1 RefSeq gene 4029197 4029835 . - . ID=gene3597;Name=YPSIP31758_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19185;old_locus_tag=YpsIP31758_3569 NC_009708.1 Protein Homology CDS 4029197 4029835 . - 0 ID=cds3483;Parent=gene3597;Dbxref=Genbank:WP_012105736.1;Name=WP_012105736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105736.1;transl_table=11 NC_009708.1 RefSeq gene 4029987 4030430 . - . ID=gene3598;Name=YPSIP31758_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19190;old_locus_tag=YpsIP31758_3570 NC_009708.1 Protein Homology CDS 4029987 4030430 . - 0 ID=cds3484;Parent=gene3598;Dbxref=Genbank:WP_011191642.1;Name=WP_011191642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191642.1;transl_table=11 NC_009708.1 RefSeq gene 4030559 4031725 . - . ID=gene3599;Name=YPSIP31758_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19195;old_locus_tag=YpsIP31758_3571 NC_009708.1 Protein Homology CDS 4030559 4031725 . - 0 ID=cds3485;Parent=gene3599;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11 NC_009708.1 RefSeq gene 4031740 4032834 . - . ID=gene3600;Name=YPSIP31758_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19200;old_locus_tag=YpsIP31758_3572 NC_009708.1 Protein Homology CDS 4031740 4032834 . - 0 ID=cds3486;Parent=gene3600;Dbxref=Genbank:WP_012105737.1;Name=WP_012105737.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105737.1;transl_table=11 NC_009708.1 RefSeq gene 4032846 4033685 . - . ID=gene3601;Name=YPSIP31758_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19205;old_locus_tag=YpsIP31758_3573 NC_009708.1 Protein Homology CDS 4032846 4033685 . - 0 ID=cds3487;Parent=gene3601;Dbxref=Genbank:WP_002209279.1;Name=WP_002209279.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NC_009708.1 RefSeq gene 4033704 4034588 . - . ID=gene3602;Name=YPSIP31758_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19210;old_locus_tag=YpsIP31758_3574 NC_009708.1 Protein Homology CDS 4033704 4034588 . - 0 ID=cds3488;Parent=gene3602;Dbxref=Genbank:WP_011191641.1;Name=WP_011191641.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011191641.1;transl_table=11 NC_009708.1 RefSeq gene 4034596 4035909 . - . ID=gene3603;Name=YPSIP31758_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19215;old_locus_tag=YpsIP31758_3575 NC_009708.1 Protein Homology CDS 4034596 4035909 . - 0 ID=cds3489;Parent=gene3603;Dbxref=Genbank:WP_011191640.1;Name=WP_011191640.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011191640.1;transl_table=11 NC_009708.1 RefSeq gene 4036470 4037705 . + . ID=gene3604;Name=YPSIP31758_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19220;old_locus_tag=YpsIP31758_3576 NC_009708.1 Protein Homology CDS 4036470 4037705 . + 0 ID=cds3490;Parent=gene3604;Dbxref=Genbank:WP_032466098.1;Name=WP_032466098.1;gbkey=CDS;product=alginate lyase;protein_id=WP_032466098.1;transl_table=11 NC_009708.1 RefSeq gene 4037729 4039747 . + . ID=gene3605;Name=YPSIP31758_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19225;old_locus_tag=YpsIP31758_3577 NC_009708.1 Protein Homology CDS 4037729 4039747 . + 0 ID=cds3491;Parent=gene3605;Dbxref=Genbank:WP_012105739.1;Name=WP_012105739.1;gbkey=CDS;product=alginate lyase;protein_id=WP_012105739.1;transl_table=11 NC_009708.1 RefSeq gene 4039975 4040262 . + . ID=gene3606;Name=YPSIP31758_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19230;old_locus_tag=YpsIP31758_3578 NC_009708.1 Protein Homology CDS 4039975 4040262 . + 0 ID=cds3492;Parent=gene3606;Dbxref=Genbank:WP_002209274.1;Name=WP_002209274.1;gbkey=CDS;product=nuclease;protein_id=WP_002209274.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4040229 4040360 . + . ID=id307;gbkey=repeat_region NC_009708.1 RefSeq gene 4040437 4040940 . - . ID=gene3607;Name=YPSIP31758_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19235;old_locus_tag=YpsIP31758_3579 NC_009708.1 Protein Homology CDS 4040437 4040940 . - 0 ID=cds3493;Parent=gene3607;Dbxref=Genbank:WP_011191636.1;Name=WP_011191636.1;gbkey=CDS;product=N-acetyltransferase;protein_id=WP_011191636.1;transl_table=11 NC_009708.1 RefSeq gene 4040934 4041455 . - . ID=gene3608;Name=YPSIP31758_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19240;old_locus_tag=YpsIP31758_3580 NC_009708.1 Protein Homology CDS 4040934 4041455 . - 0 ID=cds3494;Parent=gene3608;Dbxref=Genbank:WP_002209272.1;Name=WP_002209272.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_002209272.1;transl_table=11 NC_009708.1 RefSeq gene 4041536 4041661 . + . ID=gene3609;Name=YPSIP31758_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19245;old_locus_tag=YpsIP31758_3581 NC_009708.1 Protein Homology CDS 4041536 4041661 . + 0 ID=cds3495;Parent=gene3609;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11 NC_009708.1 RefSeq gene 4041771 4042766 . + . ID=gene3610;Name=YPSIP31758_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19250;old_locus_tag=YpsIP31758_3582 NC_009708.1 Protein Homology CDS 4041771 4042766 . + 0 ID=cds3496;Parent=gene3610;Dbxref=Genbank:WP_002209270.1;Name=WP_002209270.1;gbkey=CDS;product=protease;protein_id=WP_002209270.1;transl_table=11 NC_009708.1 RefSeq gene 4042778 4043656 . + . ID=gene3611;Name=YPSIP31758_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19255;old_locus_tag=YpsIP31758_3583 NC_009708.1 Protein Homology CDS 4042778 4043656 . + 0 ID=cds3497;Parent=gene3611;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11 NC_009708.1 RefSeq gene 4043797 4045203 . - . ID=gene3612;Name=YPSIP31758_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19260;old_locus_tag=YpsIP31758_3584 NC_009708.1 Protein Homology CDS 4043797 4045203 . - 0 ID=cds3498;Parent=gene3612;Dbxref=Genbank:WP_011191634.1;Name=WP_011191634.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_011191634.1;transl_table=11 NC_009708.1 RefSeq gene 4045205 4048330 . - . ID=gene3613;Name=YPSIP31758_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19265;old_locus_tag=YpsIP31758_3585 NC_009708.1 Protein Homology CDS 4045205 4048330 . - 0 ID=cds3499;Parent=gene3613;Dbxref=Genbank:WP_012105740.1;Name=WP_012105740.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_012105740.1;transl_table=11 NC_009708.1 RefSeq gene 4048334 4049494 . - . ID=gene3614;Name=YPSIP31758_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19270;old_locus_tag=YpsIP31758_3586 NC_009708.1 Protein Homology CDS 4048334 4049494 . - 0 ID=cds3500;Parent=gene3614;Dbxref=Genbank:WP_012105741.1;Name=WP_012105741.1;gbkey=CDS;product=acriflavine resistance protein E;protein_id=WP_012105741.1;transl_table=11 NC_009708.1 RefSeq gene 4050002 4051057 . + . ID=gene3615;Name=YPSIP31758_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19275;old_locus_tag=YpsIP31758_3587 NC_009708.1 Protein Homology CDS 4050002 4051057 . + 0 ID=cds3501;Parent=gene3615;Dbxref=Genbank:WP_012105742.1;Name=WP_012105742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105742.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4051134 4051281 . + . ID=id308;gbkey=repeat_region NC_009708.1 RefSeq gene 4051312 4051623 . - . ID=gene3616;Name=YPSIP31758_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19280;old_locus_tag=YpsIP31758_3588 NC_009708.1 Protein Homology CDS 4051312 4051623 . - 0 ID=cds3502;Parent=gene3616;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11 NC_009708.1 RefSeq gene 4051647 4052015 . - . ID=gene3617;Name=YPSIP31758_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19285 NC_009708.1 Protein Homology CDS 4051647 4052015 . - 0 ID=cds3503;Parent=gene3617;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11 NC_009708.1 RefSeq gene 4052058 4052231 . - . ID=gene3618;Name=YPSIP31758_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19290;old_locus_tag=YpsIP31758_3589 NC_009708.1 Protein Homology CDS 4052058 4052231 . - 0 ID=cds3504;Parent=gene3618;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11 NC_009708.1 RefSeq gene 4052251 4054245 . - . ID=gene3619;Name=YPSIP31758_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19295;old_locus_tag=YpsIP31758_3590 NC_009708.1 Protein Homology CDS 4052251 4054245 . - 0 ID=cds3505;Parent=gene3619;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NC_009708.1 RefSeq gene 4054432 4055316 . - . ID=gene3620;Name=YPSIP31758_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19300;old_locus_tag=YpsIP31758_3591 NC_009708.1 Protein Homology CDS 4054432 4055316 . - 0 ID=cds3506;Parent=gene3620;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NC_009708.1 RefSeq gene 4055441 4057558 . - . ID=gene3621;Name=YPSIP31758_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19305;old_locus_tag=YpsIP31758_3592 NC_009708.1 Protein Homology CDS 4055441 4057558 . - 0 ID=cds3507;Parent=gene3621;Dbxref=Genbank:WP_002209259.1;Name=WP_002209259.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11 NC_009708.1 RefSeq gene 4057624 4057805 . + . ID=gene3622;Name=YPSIP31758_RS22505;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22505 NC_009708.1 RefSeq transcript 4057624 4057805 . + . ID=rna107;Parent=gene3622;gbkey=misc_RNA;product=SraG RNA NC_009708.1 RefSeq exon 4057624 4057805 . + . ID=id309;Parent=rna107;gbkey=misc_RNA;product=SraG RNA NC_009708.1 RefSeq gene 4057822 4058091 . - . ID=gene3623;Name=YPSIP31758_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19310;old_locus_tag=YpsIP31758_3593 NC_009708.1 Protein Homology CDS 4057822 4058091 . - 0 ID=cds3508;Parent=gene3623;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NC_009708.1 RefSeq gene 4058035 4058153 . - . ID=gene3624;Name=YPSIP31758_RS22510;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22510 NC_009708.1 RefSeq transcript 4058035 4058153 . - . ID=rna108;Parent=gene3624;gbkey=misc_RNA;product=Ribosomal S15 leader NC_009708.1 RefSeq exon 4058035 4058153 . - . ID=id310;Parent=rna108;gbkey=misc_RNA;product=Ribosomal S15 leader NC_009708.1 RefSeq gene 4058213 4059187 . - . ID=gene3625;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19315;old_locus_tag=YpsIP31758_3594 NC_009708.1 Protein Homology CDS 4058213 4059187 . - 0 ID=cds3509;Parent=gene3625;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11 NC_009708.1 RefSeq gene 4059187 4059597 . - . ID=gene3626;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19320;old_locus_tag=YpsIP31758_3595 NC_009708.1 Protein Homology CDS 4059187 4059597 . - 0 ID=cds3510;Parent=gene3626;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11 NC_009708.1 RefSeq gene 4059663 4062341 . - . ID=gene3627;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19325;old_locus_tag=YpsIP31758_3596 NC_009708.1 Protein Homology CDS 4059663 4062341 . - 0 ID=cds3511;Parent=gene3627;Dbxref=Genbank:WP_002223151.1;Name=WP_002223151.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_002223151.1;transl_table=11 NC_009708.1 RefSeq gene 4062366 4063853 . - . ID=gene3628;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19330;old_locus_tag=YpsIP31758_3597 NC_009708.1 Protein Homology CDS 4062366 4063853 . - 0 ID=cds3512;Parent=gene3628;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NC_009708.1 RefSeq gene 4063875 4064327 . - . ID=gene3629;Name=YPSIP31758_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19335;old_locus_tag=YpsIP31758_3598 NC_009708.1 Protein Homology CDS 4063875 4064327 . - 0 ID=cds3513;Parent=gene3629;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11 NC_009708.1 RefSeq gene 4064543 4064619 . - . ID=gene3630;Name=YPSIP31758_RS19340;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS19340;old_locus_tag=YpsIP31758_4276 NC_009708.1 tRNAscan-SE tRNA 4064543 4064619 . - . ID=rna109;Parent=gene3630;anticodon=(pos:complement(4064583..4064585));gbkey=tRNA;product=tRNA-Met NC_009708.1 tRNAscan-SE exon 4064543 4064619 . - . ID=id311;Parent=rna109;anticodon=(pos:complement(4064583..4064585));gbkey=tRNA;product=tRNA-Met NC_009708.1 RefSeq gene 4064680 4064766 . - . ID=gene3631;Name=YPSIP31758_RS19345;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS19345;old_locus_tag=YpsIP31758_4277 NC_009708.1 tRNAscan-SE tRNA 4064680 4064766 . - . ID=rna110;Parent=gene3631;anticodon=(pos:complement(4064730..4064732));gbkey=tRNA;product=tRNA-Leu NC_009708.1 tRNAscan-SE exon 4064680 4064766 . - . ID=id312;Parent=rna110;anticodon=(pos:complement(4064730..4064732));gbkey=tRNA;product=tRNA-Leu NC_009708.1 RefSeq gene 4064859 4065194 . - . ID=gene3632;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19350;old_locus_tag=YpsIP31758_3599 NC_009708.1 Protein Homology CDS 4064859 4065194 . - 0 ID=cds3514;Parent=gene3632;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NC_009708.1 RefSeq gene 4065417 4066757 . - . ID=gene3633;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19355;old_locus_tag=YpsIP31758_3600 NC_009708.1 Protein Homology CDS 4065417 4066757 . - 0 ID=cds3515;Parent=gene3633;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NC_009708.1 RefSeq gene 4066767 4067600 . - . ID=gene3634;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19360;old_locus_tag=YpsIP31758_3601 NC_009708.1 Protein Homology CDS 4066767 4067600 . - 0 ID=cds3516;Parent=gene3634;Dbxref=Genbank:WP_011191630.1;Name=WP_011191630.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_011191630.1;transl_table=11 NC_009708.1 RefSeq gene 4067720 4069654 . - . ID=gene3635;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=YPSIP31758_RS19365;old_locus_tag=YpsIP31758_3602 NC_009708.1 Protein Homology CDS 4067720 4069654 . - 0 ID=cds3517;Parent=gene3635;Dbxref=Genbank:WP_002228195.1;Name=WP_002228195.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_002228195.1;transl_table=11 NC_009708.1 RefSeq gene 4069711 4070340 . - . ID=gene3636;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19370;old_locus_tag=YpsIP31758_3603 NC_009708.1 Protein Homology CDS 4069711 4070340 . - 0 ID=cds3518;Parent=gene3636;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11 NC_009708.1 RefSeq gene 4070487 4070780 . + . ID=gene3637;Name=YPSIP31758_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19375;old_locus_tag=YpsIP31758_3604 NC_009708.1 Protein Homology CDS 4070487 4070780 . + 0 ID=cds3519;Parent=gene3637;Dbxref=Genbank:WP_002210185.1;Name=WP_002210185.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002210185.1;transl_table=11 NC_009708.1 RefSeq gene 4070908 4071384 . - . ID=gene3638;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19380;old_locus_tag=YpsIP31758_3605 NC_009708.1 Protein Homology CDS 4070908 4071384 . - 0 ID=cds3520;Parent=gene3638;Dbxref=Genbank:WP_002210184.1;Name=WP_002210184.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NC_009708.1 RefSeq gene 4071642 4073090 . + . ID=gene3639;Name=YPSIP31758_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19385;old_locus_tag=YpsIP31758_3606 NC_009708.1 Protein Homology CDS 4071642 4073090 . + 0 ID=cds3521;Parent=gene3639;Dbxref=Genbank:WP_002217314.1;Name=WP_002217314.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002217314.1;transl_table=11 NC_009708.1 RefSeq gene 4073096 4073758 . + . ID=gene3640;Name=YPSIP31758_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19390;old_locus_tag=YpsIP31758_3607 NC_009708.1 Protein Homology CDS 4073096 4073758 . + 0 ID=cds3522;Parent=gene3640;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11 NC_009708.1 RefSeq gene 4073755 4074822 . + . ID=gene3641;Name=YPSIP31758_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19395;old_locus_tag=YpsIP31758_3608 NC_009708.1 Protein Homology CDS 4073755 4074822 . + 0 ID=cds3523;Parent=gene3641;Dbxref=Genbank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002210182.1;transl_table=11 NC_009708.1 RefSeq gene 4074917 4076089 . - . ID=gene3642;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=YPSIP31758_RS19400;old_locus_tag=YpsIP31758_3609 NC_009708.1 Protein Homology CDS 4074917 4076089 . - 0 ID=cds3524;Parent=gene3642;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11 NC_009708.1 RefSeq gene 4076090 4077076 . - . ID=gene3643;Name=YPSIP31758_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19405;old_locus_tag=YpsIP31758_3610 NC_009708.1 Protein Homology CDS 4076090 4077076 . - 0 ID=cds3525;Parent=gene3643;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11 NC_009708.1 RefSeq gene 4077164 4077421 . - . ID=gene3644;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19410;old_locus_tag=YpsIP31758_3611 NC_009708.1 Protein Homology CDS 4077164 4077421 . - 0 ID=cds3526;Parent=gene3644;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NC_009708.1 RefSeq gene 4077441 4077752 . - . ID=gene3645;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19415;old_locus_tag=YpsIP31758_3612 NC_009708.1 Protein Homology CDS 4077441 4077752 . - 0 ID=cds3527;Parent=gene3645;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NC_009708.1 RefSeq gene 4078012 4078983 . + . ID=gene3646;Name=YPSIP31758_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19420;old_locus_tag=YpsIP31758_3613 NC_009708.1 Protein Homology CDS 4078012 4078983 . + 0 ID=cds3528;Parent=gene3646;Dbxref=Genbank:WP_011191628.1;Name=WP_011191628.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_011191628.1;transl_table=11 NC_009708.1 RefSeq gene 4079080 4079427 . - . ID=gene3647;Name=YPSIP31758_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19425;old_locus_tag=YpsIP31758_3614 NC_009708.1 Protein Homology CDS 4079080 4079427 . - 0 ID=cds3529;Parent=gene3647;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NC_009708.1 RefSeq gene 4079611 4079886 . + . ID=gene3648;Name=YPSIP31758_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19430;old_locus_tag=YpsIP31758_3615 NC_009708.1 Protein Homology CDS 4079611 4079886 . + 0 ID=cds3530;Parent=gene3648;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11 NC_009708.1 RefSeq gene 4080320 4081258 . - . ID=gene3649;Name=YPSIP31758_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19435;old_locus_tag=YpsIP31758_3616 NC_009708.1 Protein Homology CDS 4080320 4081258 . - 0 ID=cds3531;Parent=gene3649;Dbxref=Genbank:WP_002210174.1;Name=WP_002210174.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NC_009708.1 RefSeq gene 4081722 4082192 . + . ID=gene3650;Name=YPSIP31758_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19440;old_locus_tag=YpsIP31758_3617 NC_009708.1 Protein Homology CDS 4081722 4082192 . + 0 ID=cds3532;Parent=gene3650;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11 NC_009708.1 RefSeq gene 4082581 4082844 . + . ID=gene3651;Name=YPSIP31758_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19445;old_locus_tag=YpsIP31758_3618 NC_009708.1 Protein Homology CDS 4082581 4082844 . + 0 ID=cds3533;Parent=gene3651;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11 NC_009708.1 RefSeq gene 4082847 4083053 . - . ID=gene3652;Name=YPSIP31758_RS19450;gbkey=Gene;gene_biotype=other;locus_tag=YPSIP31758_RS19450;old_locus_tag=YpsIP31758_3619 NC_009708.1 RefSeq repeat_region 4082869 4083038 . + . ID=id313;gbkey=repeat_region NC_009708.1 RefSeq gene 4083140 4084525 . - . ID=gene3653;Name=YPSIP31758_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19455;old_locus_tag=YpsIP31758_3620 NC_009708.1 Protein Homology CDS 4083140 4084525 . - 0 ID=cds3534;Parent=gene3653;Dbxref=Genbank:WP_012105743.1;Name=WP_012105743.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_012105743.1;transl_table=11 NC_009708.1 RefSeq gene 4084696 4085709 . + . ID=gene3654;Name=YPSIP31758_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19460;old_locus_tag=YpsIP31758_3621 NC_009708.1 Protein Homology CDS 4084696 4085709 . + 0 ID=cds3535;Parent=gene3654;Dbxref=Genbank:WP_011191626.1;Name=WP_011191626.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_011191626.1;transl_table=11 NC_009708.1 RefSeq gene 4085909 4086436 . + . ID=gene3655;Name=YPSIP31758_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19465;old_locus_tag=YpsIP31758_3622 NC_009708.1 Protein Homology CDS 4085909 4086436 . + 0 ID=cds3536;Parent=gene3655;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11 NC_009708.1 RefSeq gene 4086535 4086891 . - . ID=gene3656;Name=YPSIP31758_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19470;old_locus_tag=YpsIP31758_3623 NC_009708.1 Protein Homology CDS 4086535 4086891 . - 0 ID=cds3537;Parent=gene3656;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11 NC_009708.1 RefSeq gene 4086894 4090832 . - . ID=gene3657;Name=YPSIP31758_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19475;old_locus_tag=YpsIP31758_3624 NC_009708.1 Protein Homology CDS 4086894 4090832 . - 0 ID=cds3538;Parent=gene3657;Dbxref=Genbank:WP_012105746.1;Name=WP_012105746.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105746.1;transl_table=11 NC_009708.1 RefSeq gene 4090829 4092565 . - . ID=gene3658;Name=YPSIP31758_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19480;old_locus_tag=YpsIP31758_3625 NC_009708.1 Protein Homology CDS 4090829 4092565 . - 0 ID=cds3539;Parent=gene3658;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11 NC_009708.1 RefSeq gene 4092840 4093478 . + . ID=gene3659;Name=YPSIP31758_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19485;old_locus_tag=YpsIP31758_3626 NC_009708.1 Protein Homology CDS 4092840 4093478 . + 0 ID=cds3540;Parent=gene3659;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NC_009708.1 RefSeq gene 4093756 4095087 . + . ID=gene3660;Name=YPSIP31758_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19490;old_locus_tag=YpsIP31758_3627 NC_009708.1 Protein Homology CDS 4093756 4095087 . + 0 ID=cds3541;Parent=gene3660;Dbxref=Genbank:WP_002210164.1;Name=WP_002210164.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210164.1;transl_table=11 NC_009708.1 RefSeq gene 4095195 4095407 . - . ID=gene3661;Name=YPSIP31758_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19495;old_locus_tag=YpsIP31758_3628 NC_009708.1 Protein Homology CDS 4095195 4095407 . - 0 ID=cds3542;Parent=gene3661;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11 NC_009708.1 RefSeq gene 4095743 4096306 . + . ID=gene3662;Name=YPSIP31758_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19500;old_locus_tag=YpsIP31758_3629 NC_009708.1 Protein Homology CDS 4095743 4096306 . + 0 ID=cds3543;Parent=gene3662;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11 NC_009708.1 RefSeq gene 4096309 4097049 . - . ID=gene3663;Name=YPSIP31758_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19505;old_locus_tag=YpsIP31758_3630 NC_009708.1 Protein Homology CDS 4096309 4097049 . - 0 ID=cds3544;Parent=gene3663;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11 NC_009708.1 RefSeq gene 4097502 4099472 . + . ID=gene3664;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19510;old_locus_tag=YpsIP31758_3631 NC_009708.1 Protein Homology CDS 4097502 4099472 . + 0 ID=cds3545;Parent=gene3664;Dbxref=Genbank:WP_012105747.1;Name=WP_012105747.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=3'-nucleotidase;protein_id=WP_012105747.1;transl_table=11 NC_009708.1 RefSeq gene 4099601 4100266 . + . ID=gene3665;Name=YPSIP31758_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19515;old_locus_tag=YpsIP31758_3632 NC_009708.1 Protein Homology CDS 4099601 4100266 . + 0 ID=cds3546;Parent=gene3665;Dbxref=Genbank:WP_011191621.1;Name=WP_011191621.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_011191621.1;transl_table=11 NC_009708.1 RefSeq gene 4100364 4100984 . - . ID=gene3666;Name=YPSIP31758_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19520;old_locus_tag=YpsIP31758_3633 NC_009708.1 Protein Homology CDS 4100364 4100984 . - 0 ID=cds3547;Parent=gene3666;Dbxref=Genbank:WP_011191620.1;Name=WP_011191620.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_011191620.1;transl_table=11 NC_009708.1 RefSeq gene 4101333 4102073 . + . ID=gene3667;Name=YPSIP31758_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19525;old_locus_tag=YpsIP31758_3634 NC_009708.1 Protein Homology CDS 4101333 4102073 . + 0 ID=cds3548;Parent=gene3667;Dbxref=Genbank:WP_002210158.1;Name=WP_002210158.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_002210158.1;transl_table=11 NC_009708.1 RefSeq gene 4102213 4102668 . + . ID=gene3668;Name=YPSIP31758_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19530;old_locus_tag=YpsIP31758_3635 NC_009708.1 Protein Homology CDS 4102213 4102668 . + 0 ID=cds3549;Parent=gene3668;Dbxref=Genbank:WP_012105748.1;Name=WP_012105748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105748.1;transl_table=11 NC_009708.1 RefSeq gene 4102734 4103186 . - . ID=gene3669;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19535;old_locus_tag=YpsIP31758_3636 NC_009708.1 Protein Homology CDS 4102734 4103186 . - 0 ID=cds3550;Parent=gene3669;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NC_009708.1 RefSeq gene 4103226 4103453 . - . ID=gene3670;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19540;old_locus_tag=YpsIP31758_3637 NC_009708.1 Protein Homology CDS 4103226 4103453 . - 0 ID=cds3551;Parent=gene3670;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NC_009708.1 RefSeq gene 4103458 4103775 . - . ID=gene3671;Name=YPSIP31758_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19545;old_locus_tag=YpsIP31758_3638 NC_009708.1 Protein Homology CDS 4103458 4103775 . - 0 ID=cds3552;Parent=gene3671;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11 NC_009708.1 RefSeq gene 4103784 4104176 . - . ID=gene3672;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19550;old_locus_tag=YpsIP31758_3639 NC_009708.1 Protein Homology CDS 4103784 4104176 . - 0 ID=cds3553;Parent=gene3672;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NC_009708.1 RefSeq gene 4104190 4104468 . - . ID=gene3673;Name=YPSIP31758_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19555 NC_009708.1 Protein Homology CDS 4104190 4104468 . - 0 ID=cds3554;Parent=gene3673;Dbxref=Genbank:WP_011191619.1;Name=WP_011191619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191619.1;transl_table=11 NC_009708.1 RefSeq gene 4104543 4105292 . - . ID=gene3674;Name=YPSIP31758_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19560;old_locus_tag=YpsIP31758_3640 NC_009708.1 Protein Homology CDS 4104543 4105292 . - 0 ID=cds3555;Parent=gene3674;Dbxref=Genbank:WP_002230471.1;Name=WP_002230471.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230471.1;transl_table=11 NC_009708.1 RefSeq gene 4105483 4105794 . + . ID=gene3675;Name=YPSIP31758_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19565;old_locus_tag=YpsIP31758_3642 NC_009708.1 Protein Homology CDS 4105483 4105794 . + 0 ID=cds3556;Parent=gene3675;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11 NC_009708.1 RefSeq gene 4105866 4107497 . - . ID=gene3676;Name=YPSIP31758_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19570;old_locus_tag=YpsIP31758_3643 NC_009708.1 Protein Homology CDS 4105866 4107497 . - 0 ID=cds3557;Parent=gene3676;Dbxref=Genbank:WP_033852142.1;Name=WP_033852142.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl-CoA dehydrogenase;protein_id=WP_033852142.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4107670 4107841 . + . ID=id314;gbkey=repeat_region NC_009708.1 RefSeq gene 4107917 4108657 . - . ID=gene3677;Name=YPSIP31758_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19575;old_locus_tag=YpsIP31758_3644 NC_009708.1 Protein Homology CDS 4107917 4108657 . - 0 ID=cds3558;Parent=gene3677;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NC_009708.1 RefSeq gene 4108775 4111309 . - . ID=gene3678;Name=YPSIP31758_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19580;old_locus_tag=YpsIP31758_3646 NC_009708.1 Protein Homology CDS 4108775 4111309 . - 0 ID=cds3559;Parent=gene3678;Dbxref=Genbank:WP_002209159.1;Name=WP_002209159.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_002209159.1;transl_table=11 NC_009708.1 RefSeq gene 4111550 4111975 . - . ID=gene3679;Name=YPSIP31758_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19585;old_locus_tag=YpsIP31758_3647 NC_009708.1 Protein Homology CDS 4111550 4111975 . - 0 ID=cds3560;Parent=gene3679;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11 NC_009708.1 RefSeq gene 4112364 4113662 . - . ID=gene3680;Name=YPSIP31758_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19590;old_locus_tag=YpsIP31758_3648 NC_009708.1 Protein Homology CDS 4112364 4113662 . - 0 ID=cds3561;Parent=gene3680;Dbxref=Genbank:WP_012105751.1;Name=WP_012105751.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_012105751.1;transl_table=11 NC_009708.1 RefSeq gene 4113762 4113962 . - . ID=gene3681;Name=YPSIP31758_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19595 NC_009708.1 Protein Homology CDS 4113762 4113962 . - 0 ID=cds3562;Parent=gene3681;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11 NC_009708.1 RefSeq gene 4114134 4115138 . - . ID=gene3682;Name=YPSIP31758_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19600;old_locus_tag=YpsIP31758_3650 NC_009708.1 Protein Homology CDS 4114134 4115138 . - 0 ID=cds3563;Parent=gene3682;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11 NC_009708.1 RefSeq gene 4115142 4116404 . - . ID=gene3683;Name=YPSIP31758_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19605;old_locus_tag=YpsIP31758_3651 NC_009708.1 Protein Homology CDS 4115142 4116404 . - 0 ID=cds3564;Parent=gene3683;Dbxref=Genbank:WP_011191616.1;Name=WP_011191616.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_011191616.1;transl_table=11 NC_009708.1 RefSeq gene 4116645 4117931 . - . ID=gene3684;Name=YPSIP31758_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19610;old_locus_tag=YpsIP31758_3652 NC_009708.1 Protein Homology CDS 4116645 4117931 . - 0 ID=cds3565;Parent=gene3684;Dbxref=Genbank:WP_012105752.1;Name=WP_012105752.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_012105752.1;transl_table=11 NC_009708.1 RefSeq gene 4118030 4118335 . - . ID=gene3685;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19615;old_locus_tag=YpsIP31758_3653 NC_009708.1 Protein Homology CDS 4118030 4118335 . - 0 ID=cds3566;Parent=gene3685;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NC_009708.1 RefSeq gene 4118452 4119393 . - . ID=gene3686;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19620;old_locus_tag=YpsIP31758_3654 NC_009708.1 Protein Homology CDS 4118452 4119393 . - 0 ID=cds3567;Parent=gene3686;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11 NC_009708.1 RefSeq gene 4119386 4121293 . - . ID=gene3687;Name=YPSIP31758_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19625;old_locus_tag=YpsIP31758_3655 NC_009708.1 Protein Homology CDS 4119386 4121293 . - 0 ID=cds3568;Parent=gene3687;Dbxref=Genbank:WP_012105753.1;Name=WP_012105753.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_012105753.1;transl_table=11 NC_009708.1 RefSeq gene 4121309 4123222 . - . ID=gene3688;Name=YPSIP31758_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19630;old_locus_tag=YpsIP31758_3656 NC_009708.1 Protein Homology CDS 4121309 4123222 . - 0 ID=cds3569;Parent=gene3688;Dbxref=Genbank:WP_012413447.1;Name=WP_012413447.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_012413447.1;transl_table=11 NC_009708.1 RefSeq gene 4123230 4123700 . - . ID=gene3689;Name=YPSIP31758_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19635;old_locus_tag=YpsIP31758_3657 NC_009708.1 Protein Homology CDS 4123230 4123700 . - 0 ID=cds3570;Parent=gene3689;Dbxref=Genbank:WP_011191614.1;Name=WP_011191614.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_011191614.1;transl_table=11 NC_009708.1 RefSeq gene 4123711 4125225 . - . ID=gene3690;Name=YPSIP31758_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19640;old_locus_tag=YpsIP31758_3658 NC_009708.1 Protein Homology CDS 4123711 4125225 . - 0 ID=cds3571;Parent=gene3690;Dbxref=Genbank:WP_012105754.1;Name=WP_012105754.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_012105754.1;transl_table=11 NC_009708.1 RefSeq gene 4125224 4126459 . + . ID=gene3691;Name=YPSIP31758_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19645;old_locus_tag=YpsIP31758_3660 NC_009708.1 Protein Homology CDS 4125224 4126459 . + 0 ID=cds3572;Parent=gene3691;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11 NC_009708.1 RefSeq gene 4126771 4126846 . - . ID=gene3692;Name=YPSIP31758_RS19650;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS19650;old_locus_tag=YpsIP31758_4278 NC_009708.1 tRNAscan-SE tRNA 4126771 4126846 . - . ID=rna111;Parent=gene3692;anticodon=(pos:complement(4126811..4126813));gbkey=tRNA;product=tRNA-Gly NC_009708.1 tRNAscan-SE exon 4126771 4126846 . - . ID=id315;Parent=rna111;anticodon=(pos:complement(4126811..4126813));gbkey=tRNA;product=tRNA-Gly NC_009708.1 RefSeq gene 4126914 4126989 . - . ID=gene3693;Name=YPSIP31758_RS19655;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS19655;old_locus_tag=YpsIP31758_4279 NC_009708.1 tRNAscan-SE tRNA 4126914 4126989 . - . ID=rna112;Parent=gene3693;anticodon=(pos:complement(4126954..4126956));gbkey=tRNA;product=tRNA-Gly NC_009708.1 tRNAscan-SE exon 4126914 4126989 . - . ID=id316;Parent=rna112;anticodon=(pos:complement(4126954..4126956));gbkey=tRNA;product=tRNA-Gly NC_009708.1 RefSeq gene 4127081 4127156 . - . ID=gene3694;Name=YPSIP31758_RS19660;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS19660;old_locus_tag=YpsIP31758_4280 NC_009708.1 tRNAscan-SE tRNA 4127081 4127156 . - . ID=rna113;Parent=gene3694;anticodon=(pos:complement(4127121..4127123));gbkey=tRNA;product=tRNA-Gly NC_009708.1 tRNAscan-SE exon 4127081 4127156 . - . ID=id317;Parent=rna113;anticodon=(pos:complement(4127121..4127123));gbkey=tRNA;product=tRNA-Gly NC_009708.1 RefSeq gene 4127412 4127957 . - . ID=gene3695;Name=YPSIP31758_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19670;old_locus_tag=YpsIP31758_3661 NC_009708.1 Protein Homology CDS 4127412 4127957 . - 0 ID=cds3573;Parent=gene3695;Dbxref=Genbank:WP_011191612.1;Name=WP_011191612.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_011191612.1;transl_table=11 NC_009708.1 RefSeq gene 4127956 4128150 . + . ID=gene3696;Name=YPSIP31758_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19675 NC_009708.1 Protein Homology CDS 4127956 4128150 . + 0 ID=cds3574;Parent=gene3696;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11 NC_009708.1 RefSeq gene 4128157 4129209 . + . ID=gene3697;Name=YPSIP31758_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19680;old_locus_tag=YpsIP31758_3662 NC_009708.1 Protein Homology CDS 4128157 4129209 . + 0 ID=cds3575;Parent=gene3697;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4129246 4129585 . + . ID=id318;gbkey=repeat_region NC_009708.1 RefSeq gene 4129657 4130538 . + . ID=gene3698;Name=YPSIP31758_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19685;old_locus_tag=YpsIP31758_3663 NC_009708.1 Protein Homology CDS 4129657 4130538 . + 0 ID=cds3576;Parent=gene3698;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11 NC_009708.1 RefSeq gene 4130580 4133921 . + . ID=gene3699;Name=YPSIP31758_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19690;old_locus_tag=YpsIP31758_3664 NC_009708.1 Protein Homology CDS 4130580 4133921 . + 0 ID=cds3577;Parent=gene3699;Dbxref=Genbank:WP_012105755.1;Name=WP_012105755.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_012105755.1;transl_table=11 NC_009708.1 RefSeq gene 4134183 4135160 . - . ID=gene3700;Name=YPSIP31758_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19695;old_locus_tag=YpsIP31758_3665 NC_009708.1 Protein Homology CDS 4134183 4135160 . - 0 ID=cds3578;Parent=gene3700;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NC_009708.1 RefSeq gene 4135320 4135511 . - . ID=gene3701;Name=YPSIP31758_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19700;old_locus_tag=YpsIP31758_3666 NC_009708.1 Protein Homology CDS 4135320 4135511 . - 0 ID=cds3579;Parent=gene3701;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11 NC_009708.1 RefSeq gene 4135618 4137441 . + . ID=gene3702;Name=YPSIP31758_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19705;old_locus_tag=YpsIP31758_3667 NC_009708.1 Protein Homology CDS 4135618 4137441 . + 0 ID=cds3580;Parent=gene3702;Dbxref=Genbank:WP_002209137.1;Name=WP_002209137.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11 NC_009708.1 RefSeq gene 4137434 4138168 . + . ID=gene3703;Name=YPSIP31758_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19710;old_locus_tag=YpsIP31758_3668 NC_009708.1 Protein Homology CDS 4137434 4138168 . + 0 ID=cds3581;Parent=gene3703;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NC_009708.1 RefSeq gene 4138185 4138577 . + . ID=gene3704;Name=YPSIP31758_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19715;old_locus_tag=YpsIP31758_3669 NC_009708.1 Protein Homology CDS 4138185 4138577 . + 0 ID=cds3582;Parent=gene3704;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11 NC_009708.1 RefSeq gene 4138594 4138950 . + . ID=gene3705;Name=YPSIP31758_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19720;old_locus_tag=YpsIP31758_3670 NC_009708.1 Protein Homology CDS 4138594 4138950 . + 0 ID=cds3583;Parent=gene3705;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11 NC_009708.1 RefSeq gene 4139115 4139429 . - . ID=gene3706;Name=YPSIP31758_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19725;old_locus_tag=YpsIP31758_3671 NC_009708.1 Protein Homology CDS 4139115 4139429 . - 0 ID=cds3584;Parent=gene3706;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11 NC_009708.1 RefSeq gene 4139676 4140242 . - . ID=gene3707;Name=YPSIP31758_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19730;old_locus_tag=YpsIP31758_3672 NC_009708.1 Protein Homology CDS 4139676 4140242 . - 0 ID=cds3585;Parent=gene3707;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NC_009708.1 RefSeq gene 4140278 4141306 . + . ID=gene3708;Name=YPSIP31758_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19735;old_locus_tag=YpsIP31758_3673 NC_009708.1 Protein Homology CDS 4140278 4141306 . + 0 ID=cds3586;Parent=gene3708;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4141520 4141694 . + . ID=id319;gbkey=repeat_region NC_009708.1 RefSeq gene 4141778 4142176 . - . ID=gene3709;Name=YPSIP31758_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19740;old_locus_tag=YpsIP31758_3674 NC_009708.1 Protein Homology CDS 4141778 4142176 . - 0 ID=cds3587;Parent=gene3709;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11 NC_009708.1 RefSeq gene 4142801 4144447 . - . ID=gene3710;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19745;old_locus_tag=YpsIP31758_3675 NC_009708.1 Protein Homology CDS 4142801 4144447 . - 0 ID=cds3588;Parent=gene3710;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11 NC_009708.1 RefSeq gene 4144494 4144787 . - . ID=gene3711;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19750;old_locus_tag=YpsIP31758_3676 NC_009708.1 Protein Homology CDS 4144494 4144787 . - 0 ID=cds3589;Parent=gene3711;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NC_009708.1 RefSeq gene 4145042 4145605 . - . ID=gene3712;Name=YPSIP31758_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19755;old_locus_tag=YpsIP31758_3677 NC_009708.1 Protein Homology CDS 4145042 4145605 . - 0 ID=cds3590;Parent=gene3712;Dbxref=Genbank:WP_033848959.1;Name=WP_033848959.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_033848959.1;transl_table=11 NC_009708.1 RefSeq gene 4146053 4147489 . + . ID=gene3713;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19760;old_locus_tag=YpsIP31758_3678 NC_009708.1 Protein Homology CDS 4146053 4147489 . + 0 ID=cds3591;Parent=gene3713;Dbxref=Genbank:WP_002230464.1;Name=WP_002230464.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_002230464.1;transl_table=11 NC_009708.1 RefSeq gene 4147609 4148910 . + . ID=gene3714;Name=YPSIP31758_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19765;old_locus_tag=YpsIP31758_3679 NC_009708.1 Protein Homology CDS 4147609 4148910 . + 0 ID=cds3592;Parent=gene3714;Dbxref=Genbank:WP_002209123.1;Name=WP_002209123.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002209123.1;transl_table=11 NC_009708.1 RefSeq gene 4149131 4149454 . + . ID=gene3715;Name=YPSIP31758_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19770;old_locus_tag=YpsIP31758_3680 NC_009708.1 Protein Homology CDS 4149131 4149454 . + 0 ID=cds3593;Parent=gene3715;Dbxref=Genbank:WP_002353622.1;Name=WP_002353622.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent ion tolerance protein CutA;protein_id=WP_002353622.1;transl_table=11 NC_009708.1 RefSeq gene 4149430 4151217 . + . ID=gene3716;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19775;old_locus_tag=YpsIP31758_3681 NC_009708.1 Protein Homology CDS 4149430 4151217 . + 0 ID=cds3594;Parent=gene3716;Dbxref=Genbank:WP_012105757.1;Name=WP_012105757.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein DsbD;protein_id=WP_012105757.1;transl_table=11 NC_009708.1 RefSeq gene 4151279 4153426 . - . ID=gene3717;Name=YPSIP31758_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19780;old_locus_tag=YpsIP31758_3682 NC_009708.1 Protein Homology CDS 4151279 4153426 . - 0 ID=cds3595;Parent=gene3717;Dbxref=Genbank:WP_012105758.1;Name=WP_012105758.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_012105758.1;transl_table=11 NC_009708.1 RefSeq gene 4153449 4154006 . - . ID=gene3718;Name=YPSIP31758_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19785;old_locus_tag=YpsIP31758_3683 NC_009708.1 Protein Homology CDS 4153449 4154006 . - 0 ID=cds3596;Parent=gene3718;Dbxref=Genbank:WP_012105759.1;Name=WP_012105759.1;gbkey=CDS;product=effector protein;protein_id=WP_012105759.1;transl_table=11 NC_009708.1 RefSeq gene 4154029 4156044 . - . ID=gene3719;Name=YPSIP31758_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19790;old_locus_tag=YpsIP31758_3684 NC_009708.1 Protein Homology CDS 4154029 4156044 . - 0 ID=cds3597;Parent=gene3719;Dbxref=Genbank:WP_012105760.1;Name=WP_012105760.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S-binding subunit;protein_id=WP_012105760.1;transl_table=11 NC_009708.1 RefSeq gene 4156464 4157039 . + . ID=gene3720;Name=YPSIP31758_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19795;old_locus_tag=YpsIP31758_3685 NC_009708.1 Protein Homology CDS 4156464 4157039 . + 0 ID=cds3598;Parent=gene3720;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NC_009708.1 RefSeq gene 4157184 4157259 . + . ID=gene3721;Name=YPSIP31758_RS19800;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS19800;old_locus_tag=YpsIP31758_4281 NC_009708.1 tRNAscan-SE tRNA 4157184 4157259 . + . ID=rna114;Parent=gene3721;anticodon=(pos:4157217..4157219);gbkey=tRNA;product=tRNA-Phe NC_009708.1 tRNAscan-SE exon 4157184 4157259 . + . ID=id320;Parent=rna114;anticodon=(pos:4157217..4157219);gbkey=tRNA;product=tRNA-Phe NC_009708.1 RefSeq repeat_region 4157237 4157822 . + . ID=id321;gbkey=repeat_region NC_009708.1 RefSeq gene 4157513 4158481 . - . ID=gene3722;Name=YPSIP31758_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19805;old_locus_tag=YpsIP31758_3686 NC_009708.1 Protein Homology CDS 4157513 4158481 . - 0 ID=cds3599;Parent=gene3722;Dbxref=Genbank:WP_012105761.1;Name=WP_012105761.1;gbkey=CDS;product=tyrosine recombinase XerD;protein_id=WP_012105761.1;transl_table=11 NC_009708.1 RefSeq gene 4158523 4159719 . - . ID=gene3723;Name=YPSIP31758_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19810;old_locus_tag=YpsIP31758_3687 NC_009708.1 Protein Homology CDS 4158523 4159719 . - 0 ID=cds3600;Parent=gene3723;Dbxref=Genbank:WP_012105762.1;Name=WP_012105762.1;gbkey=CDS;product=helicase;protein_id=WP_012105762.1;transl_table=11 NC_009708.1 RefSeq gene 4159911 4160558 . + . ID=gene3724;Name=YPSIP31758_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19815;old_locus_tag=YpsIP31758_3688 NC_009708.1 Protein Homology CDS 4159911 4160558 . + 0 ID=cds3601;Parent=gene3724;Dbxref=Genbank:WP_012105763.1;Name=WP_012105763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105763.1;transl_table=11 NC_009708.1 RefSeq gene 4160572 4161477 . - . ID=gene3725;Name=YPSIP31758_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19820;old_locus_tag=YpsIP31758_3689 NC_009708.1 Protein Homology CDS 4160572 4161477 . - 0 ID=cds3602;Parent=gene3725;Dbxref=Genbank:WP_012105764.1;Name=WP_012105764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105764.1;transl_table=11 NC_009708.1 RefSeq gene 4161587 4162558 . - . ID=gene3726;Name=YPSIP31758_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19825;old_locus_tag=YpsIP31758_3690 NC_009708.1 Protein Homology CDS 4161587 4162558 . - 0 ID=cds3603;Parent=gene3726;Dbxref=Genbank:WP_012105765.1;Name=WP_012105765.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_012105765.1;transl_table=11 NC_009708.1 RefSeq gene 4163226 4163657 . + . ID=gene3727;Name=YPSIP31758_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19830;old_locus_tag=YpsIP31758_3691 NC_009708.1 Protein Homology CDS 4163226 4163657 . + 0 ID=cds3604;Parent=gene3727;Dbxref=Genbank:WP_012105766.1;Name=WP_012105766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105766.1;transl_table=11 NC_009708.1 RefSeq gene 4163688 4167947 . + . ID=gene3728;Name=YPSIP31758_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19835;old_locus_tag=YpsIP31758_3692 NC_009708.1 Protein Homology CDS 4163688 4167947 . + 0 ID=cds3605;Parent=gene3728;Dbxref=Genbank:WP_012105767.1;Name=WP_012105767.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012105767.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4167383 4167558 . + . ID=id322;gbkey=repeat_region NC_009708.1 RefSeq gene 4167963 4168580 . + . ID=gene3729;Name=YPSIP31758_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19840;old_locus_tag=YpsIP31758_3693 NC_009708.1 Protein Homology CDS 4167963 4168580 . + 0 ID=cds3606;Parent=gene3729;Dbxref=Genbank:WP_012105768.1;Name=WP_012105768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105768.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4168290 4168760 . + . ID=id323;gbkey=repeat_region NC_009708.1 RefSeq gene 4168820 4169257 . + . ID=gene3730;Name=YPSIP31758_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19845;old_locus_tag=YpsIP31758_3694 NC_009708.1 Protein Homology CDS 4168820 4169257 . + 0 ID=cds3607;Parent=gene3730;Dbxref=Genbank:WP_012105769.1;Name=WP_012105769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105769.1;transl_table=11 NC_009708.1 RefSeq gene 4169387 4169941 . + . ID=gene3731;Name=YPSIP31758_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19850;old_locus_tag=YpsIP31758_3695 NC_009708.1 Protein Homology CDS 4169387 4169941 . + 0 ID=cds3608;Parent=gene3731;Dbxref=Genbank:WP_012105770.1;Name=WP_012105770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105770.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4169389 4169564 . + . ID=id324;gbkey=repeat_region NC_009708.1 RefSeq gene 4169957 4170577 . + . ID=gene3732;Name=YPSIP31758_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19855;old_locus_tag=YpsIP31758_3696 NC_009708.1 Protein Homology CDS 4169957 4170577 . + 0 ID=cds3609;Parent=gene3732;Dbxref=Genbank:WP_041175796.1;Name=WP_041175796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175796.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4170287 4170756 . + . ID=id325;gbkey=repeat_region NC_009708.1 RefSeq gene 4170921 4171811 . - . ID=gene3733;Name=YPSIP31758_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19860;old_locus_tag=YpsIP31758_3697 NC_009708.1 Protein Homology CDS 4170921 4171811 . - 0 ID=cds3610;Parent=gene3733;Dbxref=Genbank:WP_012105772.1;Name=WP_012105772.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_012105772.1;transl_table=11 NC_009708.1 RefSeq gene 4172940 4173143 . + . ID=gene3734;Name=YPSIP31758_RS19865;end_range=4173143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS19865;old_locus_tag=YpsIP31758_3698;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 4172940 4173143 . + 0 ID=cds3611;Parent=gene3734;end_range=4173143,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 4173268 4174791 . - . ID=gene3735;Name=YPSIP31758_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19870;old_locus_tag=YpsIP31758_3699 NC_009708.1 Protein Homology CDS 4173268 4174791 . - 0 ID=cds3612;Parent=gene3735;Dbxref=Genbank:WP_012105774.1;Name=WP_012105774.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105774.1;transl_table=11 NC_009708.1 RefSeq gene 4174791 4176164 . - . ID=gene3736;Name=YPSIP31758_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19875;old_locus_tag=YpsIP31758_3700 NC_009708.1 Protein Homology CDS 4174791 4176164 . - 0 ID=cds3613;Parent=gene3736;Dbxref=Genbank:WP_048677773.1;Name=WP_048677773.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_048677773.1;transl_table=11 NC_009708.1 RefSeq gene 4176218 4177171 . - . ID=gene3737;Name=YPSIP31758_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19880;old_locus_tag=YpsIP31758_3701 NC_009708.1 Protein Homology CDS 4176218 4177171 . - 0 ID=cds3614;Parent=gene3737;Dbxref=Genbank:WP_012105776.1;Name=WP_012105776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105776.1;transl_table=11 NC_009708.1 RefSeq gene 4177168 4177572 . - . ID=gene3738;Name=YPSIP31758_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19885;old_locus_tag=YpsIP31758_3702 NC_009708.1 Protein Homology CDS 4177168 4177572 . - 0 ID=cds3615;Parent=gene3738;Dbxref=Genbank:WP_012105777.1;Name=WP_012105777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105777.1;transl_table=11 NC_009708.1 RefSeq gene 4178255 4180441 . + . ID=gene3739;Name=YPSIP31758_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19890;old_locus_tag=YpsIP31758_3703 NC_009708.1 Protein Homology CDS 4178255 4180441 . + 0 ID=cds3616;Parent=gene3739;Dbxref=Genbank:WP_041175797.1;Name=WP_041175797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175797.1;transl_table=11 NC_009708.1 RefSeq gene 4181327 4182028 . + . ID=gene3740;Name=YPSIP31758_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19895;old_locus_tag=YpsIP31758_3704 NC_009708.1 Protein Homology CDS 4181327 4182028 . + 0 ID=cds3617;Parent=gene3740;Dbxref=Genbank:WP_012105779.1;Name=WP_012105779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105779.1;transl_table=11 NC_009708.1 RefSeq gene 4182460 4185309 . - . ID=gene3741;Name=YPSIP31758_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19900;old_locus_tag=YpsIP31758_3705 NC_009708.1 Protein Homology CDS 4182460 4185309 . - 0 ID=cds3618;Parent=gene3741;Dbxref=Genbank:WP_049756388.1;Name=WP_049756388.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_049756388.1;transl_table=11 NC_009708.1 RefSeq gene 4185306 4185707 . - . ID=gene3742;Name=YPSIP31758_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19905;old_locus_tag=YpsIP31758_3706 NC_009708.1 Protein Homology CDS 4185306 4185707 . - 0 ID=cds3619;Parent=gene3742;Dbxref=Genbank:WP_012105781.1;Name=WP_012105781.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_012105781.1;transl_table=11 NC_009708.1 RefSeq gene 4185720 4187237 . - . ID=gene3743;Name=YPSIP31758_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19910;old_locus_tag=YpsIP31758_3707 NC_009708.1 Protein Homology CDS 4185720 4187237 . - 0 ID=cds3620;Parent=gene3743;Dbxref=Genbank:WP_012105782.1;Name=WP_012105782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105782.1;transl_table=11 NC_009708.1 RefSeq gene 4187234 4188067 . - . ID=gene3744;Name=YPSIP31758_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19915;old_locus_tag=YpsIP31758_3708 NC_009708.1 Protein Homology CDS 4187234 4188067 . - 0 ID=cds3621;Parent=gene3744;Dbxref=Genbank:WP_041175896.1;Name=WP_041175896.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_041175896.1;transl_table=11 NC_009708.1 RefSeq gene 4188097 4188750 . - . ID=gene3745;Name=YPSIP31758_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19920;old_locus_tag=YpsIP31758_3709 NC_009708.1 Protein Homology CDS 4188097 4188750 . - 0 ID=cds3622;Parent=gene3745;Dbxref=Genbank:WP_012105786.1;Name=WP_012105786.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105786.1;transl_table=11 NC_009708.1 RefSeq gene 4188747 4189121 . - . ID=gene3746;Name=YPSIP31758_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19925;old_locus_tag=YpsIP31758_3710 NC_009708.1 Protein Homology CDS 4188747 4189121 . - 0 ID=cds3623;Parent=gene3746;Dbxref=Genbank:WP_012105787.1;Name=WP_012105787.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105787.1;transl_table=11 NC_009708.1 RefSeq gene 4189131 4189481 . - . ID=gene3747;Name=YPSIP31758_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19930;old_locus_tag=YpsIP31758_3711 NC_009708.1 Protein Homology CDS 4189131 4189481 . - 0 ID=cds3624;Parent=gene3747;Dbxref=Genbank:WP_012105788.1;Name=WP_012105788.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105788.1;transl_table=11 NC_009708.1 RefSeq gene 4189497 4189742 . - . ID=gene3748;Name=YPSIP31758_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19935;old_locus_tag=YpsIP31758_3712 NC_009708.1 Protein Homology CDS 4189497 4189742 . - 0 ID=cds3625;Parent=gene3748;Dbxref=Genbank:WP_012105789.1;Name=WP_012105789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105789.1;transl_table=11 NC_009708.1 RefSeq gene 4189742 4190050 . - . ID=gene3749;Name=YPSIP31758_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19940;old_locus_tag=YpsIP31758_3713 NC_009708.1 Protein Homology CDS 4189742 4190050 . - 0 ID=cds3626;Parent=gene3749;Dbxref=Genbank:WP_012105790.1;Name=WP_012105790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105790.1;transl_table=11 NC_009708.1 RefSeq gene 4190571 4191458 . - . ID=gene3750;Name=YPSIP31758_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19945;old_locus_tag=YpsIP31758_3714 NC_009708.1 Protein Homology CDS 4190571 4191458 . - 0 ID=cds3627;Parent=gene3750;Dbxref=Genbank:WP_012105791.1;Name=WP_012105791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105791.1;transl_table=11 NC_009708.1 RefSeq gene 4191576 4193381 . - . ID=gene3751;Name=YPSIP31758_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19950;old_locus_tag=YpsIP31758_3715 NC_009708.1 Protein Homology CDS 4191576 4193381 . - 0 ID=cds3628;Parent=gene3751;Dbxref=Genbank:WP_012105792.1;Name=WP_012105792.1;gbkey=CDS;product=nucleotidyltransferase;protein_id=WP_012105792.1;transl_table=11 NC_009708.1 RefSeq gene 4193378 4194616 . - . ID=gene3752;Name=YPSIP31758_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19955;old_locus_tag=YpsIP31758_3716 NC_009708.1 Protein Homology CDS 4193378 4194616 . - 0 ID=cds3629;Parent=gene3752;Dbxref=Genbank:WP_012105793.1;Name=WP_012105793.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105793.1;transl_table=11 NC_009708.1 RefSeq gene 4194737 4195489 . - . ID=gene3753;Name=YPSIP31758_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19960;old_locus_tag=YpsIP31758_3717 NC_009708.1 Protein Homology CDS 4194737 4195489 . - 0 ID=cds3630;Parent=gene3753;Dbxref=Genbank:WP_012105794.1;Name=WP_012105794.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105794.1;transl_table=11 NC_009708.1 RefSeq gene 4195489 4197609 . - . ID=gene3754;Name=YPSIP31758_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19965;old_locus_tag=YpsIP31758_3718 NC_009708.1 Protein Homology CDS 4195489 4197609 . - 0 ID=cds3631;Parent=gene3754;Dbxref=Genbank:WP_012105795.1;Name=WP_012105795.1;gbkey=CDS;product=conjugal transfer protein TraG;protein_id=WP_012105795.1;transl_table=11 NC_009708.1 RefSeq gene 4197668 4198189 . - . ID=gene3755;Name=YPSIP31758_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19970;old_locus_tag=YpsIP31758_3719 NC_009708.1 Protein Homology CDS 4197668 4198189 . - 0 ID=cds3632;Parent=gene3755;Dbxref=Genbank:WP_012105796.1;Name=WP_012105796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105796.1;transl_table=11 NC_009708.1 RefSeq gene 4198186 4198824 . - . ID=gene3756;Name=YPSIP31758_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19975;old_locus_tag=YpsIP31758_3720 NC_009708.1 Protein Homology CDS 4198186 4198824 . - 0 ID=cds3633;Parent=gene3756;Dbxref=Genbank:WP_012105797.1;Name=WP_012105797.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_012105797.1;transl_table=11 NC_009708.1 RefSeq gene 4198803 4199570 . - . ID=gene3757;Name=YPSIP31758_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19980;old_locus_tag=YpsIP31758_3721 NC_009708.1 Protein Homology CDS 4198803 4199570 . - 0 ID=cds3634;Parent=gene3757;Dbxref=Genbank:WP_049756391.1;Name=WP_049756391.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_049756391.1;transl_table=11 NC_009708.1 RefSeq gene 4199713 4200045 . - . ID=gene3758;Name=YPSIP31758_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19985;old_locus_tag=YpsIP31758_3722 NC_009708.1 Protein Homology CDS 4199713 4200045 . - 0 ID=cds3635;Parent=gene3758;Dbxref=Genbank:WP_012105799.1;Name=WP_012105799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105799.1;transl_table=11 NC_009708.1 RefSeq gene 4200035 4200241 . - . ID=gene3759;Name=YPSIP31758_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19990;old_locus_tag=YpsIP31758_3723 NC_009708.1 Protein Homology CDS 4200035 4200241 . - 0 ID=cds3636;Parent=gene3759;Dbxref=Genbank:WP_012105800.1;Name=WP_012105800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105800.1;transl_table=11 NC_009708.1 RefSeq gene 4200453 4200809 . + . ID=gene3760;Name=YPSIP31758_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS19995;old_locus_tag=YpsIP31758_3724 NC_009708.1 Protein Homology CDS 4200453 4200809 . + 0 ID=cds3637;Parent=gene3760;Dbxref=Genbank:WP_012105801.1;Name=WP_012105801.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_012105801.1;transl_table=11 NC_009708.1 RefSeq gene 4201125 4202096 . - . ID=gene3761;Name=YPSIP31758_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20000;old_locus_tag=YpsIP31758_3726 NC_009708.1 Protein Homology CDS 4201125 4202096 . - 0 ID=cds3638;Parent=gene3761;Dbxref=Genbank:WP_041175798.1;Name=WP_041175798.1;gbkey=CDS;product=transposase;protein_id=WP_041175798.1;transl_table=11 NC_009708.1 RefSeq gene 4202151 4203428 . - . ID=gene3762;Name=YPSIP31758_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20005;old_locus_tag=YpsIP31758_3727 NC_009708.1 Protein Homology CDS 4202151 4203428 . - 0 ID=cds3639;Parent=gene3762;Dbxref=Genbank:WP_012105804.1;Name=WP_012105804.1;gbkey=CDS;product=shufflon protein;protein_id=WP_012105804.1;transl_table=11 NC_009708.1 RefSeq gene 4203432 4204100 . - . ID=gene3763;Name=YPSIP31758_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20010;old_locus_tag=YpsIP31758_3728 NC_009708.1 Protein Homology CDS 4203432 4204100 . - 0 ID=cds3640;Parent=gene3763;Dbxref=Genbank:WP_012105805.1;Name=WP_012105805.1;gbkey=CDS;product=peptidase;protein_id=WP_012105805.1;transl_table=11 NC_009708.1 RefSeq gene 4204097 4204684 . - . ID=gene3764;Name=YPSIP31758_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20015;old_locus_tag=YpsIP31758_3729 NC_009708.1 Protein Homology CDS 4204097 4204684 . - 0 ID=cds3641;Parent=gene3764;Dbxref=Genbank:WP_012105806.1;Name=WP_012105806.1;gbkey=CDS;product=type IV prepilin;protein_id=WP_012105806.1;transl_table=11 NC_009708.1 RefSeq gene 4204699 4205808 . - . ID=gene3765;Name=YPSIP31758_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20020;old_locus_tag=YpsIP31758_3730 NC_009708.1 Protein Homology CDS 4204699 4205808 . - 0 ID=cds3642;Parent=gene3765;Dbxref=Genbank:WP_041175799.1;Name=WP_041175799.1;gbkey=CDS;product=pilus assembly protein PilR;protein_id=WP_041175799.1;transl_table=11 NC_009708.1 RefSeq gene 4205801 4207354 . - . ID=gene3766;Name=YPSIP31758_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20025;old_locus_tag=YpsIP31758_3731 NC_009708.1 Protein Homology CDS 4205801 4207354 . - 0 ID=cds3643;Parent=gene3766;Dbxref=Genbank:WP_012105808.1;Name=WP_012105808.1;gbkey=CDS;product=pilus biosynthesis protein;protein_id=WP_012105808.1;transl_table=11 NC_009708.1 RefSeq gene 4207364 4207858 . - . ID=gene3767;Name=YPSIP31758_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20030;old_locus_tag=YpsIP31758_3732 NC_009708.1 Protein Homology CDS 4207364 4207858 . - 0 ID=cds3644;Parent=gene3767;Dbxref=Genbank:WP_012105809.1;Name=WP_012105809.1;gbkey=CDS;product=pilus biosynthesis protein;protein_id=WP_012105809.1;transl_table=11 NC_009708.1 RefSeq gene 4207845 4209182 . - . ID=gene3768;Name=YPSIP31758_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20035;old_locus_tag=YpsIP31758_3733 NC_009708.1 Protein Homology CDS 4207845 4209182 . - 0 ID=cds3645;Parent=gene3768;Dbxref=Genbank:WP_012105810.1;Name=WP_012105810.1;gbkey=CDS;product=pilus biosynthesis protein;protein_id=WP_012105810.1;transl_table=11 NC_009708.1 RefSeq gene 4209185 4210777 . - . ID=gene3769;Name=YPSIP31758_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20040;old_locus_tag=YpsIP31758_3734 NC_009708.1 Protein Homology CDS 4209185 4210777 . - 0 ID=cds3646;Parent=gene3769;Dbxref=Genbank:WP_012105811.1;Name=WP_012105811.1;gbkey=CDS;product=pilus biosynthesis protein;protein_id=WP_012105811.1;transl_table=11 NC_009708.1 RefSeq gene 4210791 4211228 . - . ID=gene3770;Name=YPSIP31758_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20045;old_locus_tag=YpsIP31758_3735 NC_009708.1 Protein Homology CDS 4210791 4211228 . - 0 ID=cds3647;Parent=gene3770;Dbxref=Genbank:WP_012105812.1;Name=WP_012105812.1;gbkey=CDS;product=PilM protein;protein_id=WP_012105812.1;transl_table=11 NC_009708.1 RefSeq gene 4211230 4212300 . - . ID=gene3771;Name=YPSIP31758_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20050;old_locus_tag=YpsIP31758_3736 NC_009708.1 Protein Homology CDS 4211230 4212300 . - 0 ID=cds3648;Parent=gene3771;Dbxref=Genbank:WP_012105813.1;Name=WP_012105813.1;gbkey=CDS;product=pilus biosynthesis protein;protein_id=WP_012105813.1;transl_table=11 NC_009708.1 RefSeq gene 4212438 4212824 . - . ID=gene3772;Name=YPSIP31758_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20055;old_locus_tag=YpsIP31758_3737 NC_009708.1 Protein Homology CDS 4212438 4212824 . - 0 ID=cds3649;Parent=gene3772;Dbxref=Genbank:WP_012105814.1;Name=WP_012105814.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_012105814.1;transl_table=11 NC_009708.1 RefSeq gene 4212821 4213036 . - . ID=gene3773;Name=YPSIP31758_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20060;old_locus_tag=YpsIP31758_3738 NC_009708.1 Protein Homology CDS 4212821 4213036 . - 0 ID=cds3650;Parent=gene3773;Dbxref=Genbank:WP_032466607.1;Name=WP_032466607.1;gbkey=CDS;product=prevent-host-death protein;protein_id=WP_032466607.1;transl_table=11 NC_009708.1 RefSeq gene 4213225 4213656 . - . ID=gene3774;Name=YPSIP31758_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20065;old_locus_tag=YpsIP31758_3739 NC_009708.1 Protein Homology CDS 4213225 4213656 . - 0 ID=cds3651;Parent=gene3774;Dbxref=Genbank:WP_012105816.1;Name=WP_012105816.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105816.1;transl_table=11 NC_009708.1 RefSeq gene 4213859 4214353 . - . ID=gene3775;Name=YPSIP31758_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20070;old_locus_tag=YpsIP31758_3740 NC_009708.1 Protein Homology CDS 4213859 4214353 . - 0 ID=cds3652;Parent=gene3775;Dbxref=Genbank:WP_048677710.1;Name=WP_048677710.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_048677710.1;transl_table=11 NC_009708.1 RefSeq gene 4214702 4215460 . - . ID=gene3776;Name=YPSIP31758_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20075;old_locus_tag=YpsIP31758_3742 NC_009708.1 Protein Homology CDS 4214702 4215460 . - 0 ID=cds3653;Parent=gene3776;Dbxref=Genbank:WP_012105819.1;Name=WP_012105819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105819.1;transl_table=11 NC_009708.1 RefSeq gene 4215620 4216819 . - . ID=gene3777;Name=YPSIP31758_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20080;old_locus_tag=YpsIP31758_3743 NC_009708.1 Protein Homology CDS 4215620 4216819 . - 0 ID=cds3654;Parent=gene3777;Dbxref=Genbank:WP_012105820.1;Name=WP_012105820.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105820.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4216899 4217022 . + . ID=id326;gbkey=repeat_region NC_009708.1 RefSeq gene 4217055 4217285 . - . ID=gene3778;Name=YPSIP31758_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20085 NC_009708.1 Protein Homology CDS 4217055 4217285 . - 0 ID=cds3655;Parent=gene3778;Dbxref=Genbank:WP_038825260.1;Name=WP_038825260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038825260.1;transl_table=11 NC_009708.1 RefSeq gene 4217285 4217815 . - . ID=gene3779;Name=YPSIP31758_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20090;old_locus_tag=YpsIP31758_3745 NC_009708.1 Protein Homology CDS 4217285 4217815 . - 0 ID=cds3656;Parent=gene3779;Dbxref=Genbank:WP_049600700.1;Name=WP_049600700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049600700.1;transl_table=11 NC_009708.1 RefSeq gene 4217863 4219545 . - . ID=gene3780;Name=YPSIP31758_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20095;old_locus_tag=YpsIP31758_3746 NC_009708.1 Protein Homology CDS 4217863 4219545 . - 0 ID=cds3657;Parent=gene3780;Dbxref=Genbank:WP_038825263.1;Name=WP_038825263.1;gbkey=CDS;product=ATP synthase;protein_id=WP_038825263.1;transl_table=11 NC_009708.1 RefSeq gene 4219538 4220899 . - . ID=gene3781;Name=YPSIP31758_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20100;old_locus_tag=YpsIP31758_3747 NC_009708.1 Protein Homology CDS 4219538 4220899 . - 0 ID=cds3658;Parent=gene3781;Dbxref=Genbank:WP_012105824.1;Name=WP_012105824.1;Note=unwinds double stranded DNA;gbkey=CDS;product=DNA helicase;protein_id=WP_012105824.1;transl_table=11 NC_009708.1 RefSeq gene 4220892 4221773 . - . ID=gene3782;Name=YPSIP31758_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20105;old_locus_tag=YpsIP31758_3748 NC_009708.1 Protein Homology CDS 4220892 4221773 . - 0 ID=cds3659;Parent=gene3782;Dbxref=Genbank:WP_012105825.1;Name=WP_012105825.1;gbkey=CDS;product=chromosome partitioning ATPase;protein_id=WP_012105825.1;transl_table=11 NC_009708.1 RefSeq gene 4222334 4224889 . - . ID=gene3783;Name=YPSIP31758_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20110;old_locus_tag=YpsIP31758_3749 NC_009708.1 Protein Homology CDS 4222334 4224889 . - 0 ID=cds3660;Parent=gene3783;Dbxref=Genbank:WP_041175800.1;Name=WP_041175800.1;gbkey=CDS;product=enhancing factor;protein_id=WP_041175800.1;transl_table=11 NC_009708.1 RefSeq gene 4224919 4225086 . - . ID=gene3784;Name=YPSIP31758_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20115;old_locus_tag=YpsIP31758_3750 NC_009708.1 Protein Homology CDS 4224919 4225086 . - 0 ID=cds3661;Parent=gene3784;Dbxref=Genbank:WP_011191605.1;Name=WP_011191605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191605.1;transl_table=11 NC_009708.1 RefSeq gene 4225316 4225741 . + . ID=gene3785;Name=YPSIP31758_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20120;old_locus_tag=YpsIP31758_3751 NC_009708.1 Protein Homology CDS 4225316 4225741 . + 0 ID=cds3662;Parent=gene3785;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11 NC_009708.1 RefSeq gene 4226177 4226467 . - . ID=gene3786;Name=YPSIP31758_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20125 NC_009708.1 Protein Homology CDS 4226177 4226467 . - 0 ID=cds3663;Parent=gene3786;Dbxref=Genbank:WP_011191604.1;Name=WP_011191604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191604.1;transl_table=11 NC_009708.1 RefSeq gene 4226621 4227655 . + . ID=gene3787;Name=YPSIP31758_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20130;old_locus_tag=YpsIP31758_3752 NC_009708.1 Protein Homology CDS 4226621 4227655 . + 0 ID=cds3664;Parent=gene3787;Dbxref=Genbank:WP_002209111.1;Name=WP_002209111.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_002209111.1;transl_table=11 NC_009708.1 RefSeq gene 4227804 4228676 . - . ID=gene3788;Name=YPSIP31758_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20135;old_locus_tag=YpsIP31758_3753 NC_009708.1 Protein Homology CDS 4227804 4228676 . - 0 ID=cds3665;Parent=gene3788;Dbxref=Genbank:WP_011191603.1;Name=WP_011191603.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_011191603.1;transl_table=11 NC_009708.1 RefSeq gene 4228810 4229631 . - . ID=gene3789;Name=YPSIP31758_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20140;old_locus_tag=YpsIP31758_3754 NC_009708.1 Protein Homology CDS 4228810 4229631 . - 0 ID=cds3666;Parent=gene3789;Dbxref=Genbank:WP_011906460.1;Name=WP_011906460.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_011906460.1;transl_table=11 NC_009708.1 RefSeq gene 4229713 4229856 . - . ID=gene3790;Name=YPSIP31758_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20145 NC_009708.1 Protein Homology CDS 4229713 4229856 . - 0 ID=cds3667;Parent=gene3790;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11 NC_009708.1 RefSeq gene 4229853 4230059 . - . ID=gene3791;Name=YPSIP31758_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20150 NC_009708.1 Protein Homology CDS 4229853 4230059 . - 0 ID=cds3668;Parent=gene3791;Dbxref=Genbank:WP_002209106.1;Name=WP_002209106.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_002209106.1;transl_table=11 NC_009708.1 RefSeq gene 4230058 4231515 . + . ID=gene3792;Name=YPSIP31758_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20155;old_locus_tag=YpsIP31758_3755 NC_009708.1 Protein Homology CDS 4230058 4231515 . + 0 ID=cds3669;Parent=gene3792;Dbxref=Genbank:WP_041175801.1;Name=WP_041175801.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_041175801.1;transl_table=11 NC_009708.1 RefSeq gene 4231512 4232768 . + . ID=gene3793;Name=YPSIP31758_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20160;old_locus_tag=YpsIP31758_3756 NC_009708.1 Protein Homology CDS 4231512 4232768 . + 0 ID=cds3670;Parent=gene3793;Dbxref=Genbank:WP_012105828.1;Name=WP_012105828.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_012105828.1;transl_table=11 NC_009708.1 RefSeq gene 4232781 4233605 . + . ID=gene3794;Name=YPSIP31758_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20165;old_locus_tag=YpsIP31758_3757 NC_009708.1 Protein Homology CDS 4232781 4233605 . + 0 ID=cds3671;Parent=gene3794;Dbxref=Genbank:WP_011191600.1;Name=WP_011191600.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_011191600.1;transl_table=11 NC_009708.1 RefSeq gene 4233672 4234820 . + . ID=gene3795;Name=YPSIP31758_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20170;old_locus_tag=YpsIP31758_3758 NC_009708.1 Protein Homology CDS 4233672 4234820 . + 0 ID=cds3672;Parent=gene3795;Dbxref=Genbank:WP_011191599.1;Name=WP_011191599.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_011191599.1;transl_table=11 NC_009708.1 RefSeq gene 4234834 4235148 . + . ID=gene3796;Name=YPSIP31758_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20175;old_locus_tag=YpsIP31758_3759 NC_009708.1 Protein Homology CDS 4234834 4235148 . + 0 ID=cds3673;Parent=gene3796;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NC_009708.1 RefSeq gene 4235360 4235908 . - . ID=gene3797;Name=YPSIP31758_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20180;old_locus_tag=YpsIP31758_3760 NC_009708.1 Protein Homology CDS 4235360 4235908 . - 0 ID=cds3674;Parent=gene3797;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4236180 4236317 . + . ID=id327;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4236321 4236458 . + . ID=id328;gbkey=repeat_region NC_009708.1 RefSeq gene 4236507 4239350 . + . ID=gene3798;Name=YPSIP31758_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20185;old_locus_tag=YpsIP31758_3761 NC_009708.1 Protein Homology CDS 4236507 4239350 . + 0 ID=cds3675;Parent=gene3798;Dbxref=Genbank:WP_012105829.1;Name=WP_012105829.1;gbkey=CDS;product=excinuclease ABC subunit A;protein_id=WP_012105829.1;transl_table=11 NC_009708.1 RefSeq gene 4239443 4239802 . - . ID=gene3799;Name=YPSIP31758_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20190;old_locus_tag=YpsIP31758_3762 NC_009708.1 Protein Homology CDS 4239443 4239802 . - 0 ID=cds3676;Parent=gene3799;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11 NC_009708.1 RefSeq gene 4240329 4241522 . - . ID=gene3800;Name=YPSIP31758_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20195;old_locus_tag=YpsIP31758_3763 NC_009708.1 Protein Homology CDS 4240329 4241522 . - 0 ID=cds3677;Parent=gene3800;Dbxref=Genbank:WP_012105830.1;Name=WP_012105830.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_012105830.1;transl_table=11 NC_009708.1 RefSeq gene 4241708 4242787 . - . ID=gene3801;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20200;old_locus_tag=YpsIP31758_3764 NC_009708.1 Protein Homology CDS 4241708 4242787 . - 0 ID=cds3678;Parent=gene3801;Dbxref=Genbank:WP_012105831.1;Name=WP_012105831.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_012105831.1;transl_table=11 NC_009708.1 RefSeq gene 4242884 4244290 . - . ID=gene3802;Name=YPSIP31758_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20205;old_locus_tag=YpsIP31758_3765 NC_009708.1 Protein Homology CDS 4242884 4244290 . - 0 ID=cds3679;Parent=gene3802;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NC_009708.1 RefSeq gene 4244622 4245605 . + . ID=gene3803;Name=YPSIP31758_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20210;old_locus_tag=YpsIP31758_3766 NC_009708.1 Protein Homology CDS 4244622 4245605 . + 0 ID=cds3680;Parent=gene3803;Dbxref=Genbank:WP_012105832.1;Name=WP_012105832.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_012105832.1;transl_table=11 NC_009708.1 RefSeq gene 4245950 4246168 . - . ID=gene3804;Name=YPSIP31758_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20215;old_locus_tag=YpsIP31758_3767 NC_009708.1 Protein Homology CDS 4245950 4246168 . - 0 ID=cds3681;Parent=gene3804;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11 NC_009708.1 RefSeq gene 4246693 4247730 . - . ID=gene3805;Name=YPSIP31758_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20220;old_locus_tag=YpsIP31758_3768 NC_009708.1 Protein Homology CDS 4246693 4247730 . - 0 ID=cds3682;Parent=gene3805;Dbxref=Genbank:WP_012105833.1;Name=WP_012105833.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_012105833.1;transl_table=11 NC_009708.1 RefSeq gene 4247985 4248494 . + . ID=gene3806;Name=YPSIP31758_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20225;old_locus_tag=YpsIP31758_3769 NC_009708.1 Protein Homology CDS 4247985 4248494 . + 0 ID=cds3683;Parent=gene3806;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11 NC_009708.1 RefSeq gene 4248675 4249283 . - . ID=gene3807;Name=YPSIP31758_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20230;old_locus_tag=YpsIP31758_3770 NC_009708.1 Protein Homology CDS 4248675 4249283 . - 0 ID=cds3684;Parent=gene3807;Dbxref=Genbank:WP_002209090.1;Name=WP_002209090.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_002209090.1;transl_table=11 NC_009708.1 RefSeq gene 4249408 4249779 . - . ID=gene3808;Name=YPSIP31758_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20235;old_locus_tag=YpsIP31758_3771 NC_009708.1 Protein Homology CDS 4249408 4249779 . - 0 ID=cds3685;Parent=gene3808;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NC_009708.1 RefSeq gene 4249907 4252384 . + . ID=gene3809;Name=YPSIP31758_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20240;old_locus_tag=YpsIP31758_3772 NC_009708.1 Protein Homology CDS 4249907 4252384 . + 0 ID=cds3686;Parent=gene3809;Dbxref=Genbank:WP_002214644.1;Name=WP_002214644.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002214644.1;transl_table=11 NC_009708.1 RefSeq gene 4252565 4253431 . - . ID=gene3810;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20245;old_locus_tag=YpsIP31758_3773 NC_009708.1 Protein Homology CDS 4252565 4253431 . - 0 ID=cds3687;Parent=gene3810;Dbxref=Genbank:WP_012105834.1;Name=WP_012105834.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_012105834.1;transl_table=11 NC_009708.1 RefSeq gene 4253597 4254121 . - . ID=gene3811;Name=YPSIP31758_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20250;old_locus_tag=YpsIP31758_3774 NC_009708.1 Protein Homology CDS 4253597 4254121 . - 0 ID=cds3688;Parent=gene3811;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11 NC_009708.1 RefSeq gene 4254954 4258811 . + . ID=gene3812;Name=YPSIP31758_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20255;old_locus_tag=YpsIP31758_3775 NC_009708.1 Protein Homology CDS 4254954 4258811 . + 0 ID=cds3689;Parent=gene3812;Dbxref=Genbank:WP_012105835.1;Name=WP_012105835.1;gbkey=CDS;product=autotransporter;protein_id=WP_012105835.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4256653 4258819 . + . ID=id329;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4258938 4259108 . + . ID=id330;gbkey=repeat_region NC_009708.1 RefSeq gene 4259133 4261190 . - . ID=gene3813;Name=YPSIP31758_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20260;old_locus_tag=YpsIP31758_3776 NC_009708.1 Protein Homology CDS 4259133 4261190 . - 0 ID=cds3690;Parent=gene3813;Dbxref=Genbank:WP_011191591.1;Name=WP_011191591.1;gbkey=CDS;product=FAD-binding protein;protein_id=WP_011191591.1;transl_table=11 NC_009708.1 RefSeq gene 4261522 4261769 . - . ID=gene3814;Name=YPSIP31758_RS20265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS20265;pseudo=true NC_009708.1 Protein Homology CDS 4261522 4261769 . - 0 ID=cds3691;Parent=gene3814;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 4262193 4263512 . - . ID=gene3815;Name=YPSIP31758_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20270;old_locus_tag=YpsIP31758_3779 NC_009708.1 Protein Homology CDS 4262193 4263512 . - 0 ID=cds3692;Parent=gene3815;Dbxref=Genbank:WP_012304692.1;Name=WP_012304692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304692.1;transl_table=11 NC_009708.1 RefSeq gene 4264774 4264956 . - . ID=gene3816;Name=YPSIP31758_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20275 NC_009708.1 Protein Homology CDS 4264774 4264956 . - 0 ID=cds3693;Parent=gene3816;Dbxref=Genbank:WP_012304693.1;Name=WP_012304693.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304693.1;transl_table=11 NC_009708.1 RefSeq gene 4264967 4265710 . - . ID=gene3817;Name=YPSIP31758_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20280;old_locus_tag=YpsIP31758_3781 NC_009708.1 Protein Homology CDS 4264967 4265710 . - 0 ID=cds3694;Parent=gene3817;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11 NC_009708.1 RefSeq gene 4265782 4268160 . - . ID=gene3818;Name=YPSIP31758_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20285;old_locus_tag=YpsIP31758_3782 NC_009708.1 Protein Homology CDS 4265782 4268160 . - 0 ID=cds3695;Parent=gene3818;Dbxref=Genbank:WP_012105840.1;Name=WP_012105840.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105840.1;transl_table=11 NC_009708.1 RefSeq gene 4268411 4269049 . - . ID=gene3819;Name=YPSIP31758_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20290;old_locus_tag=YpsIP31758_3783 NC_009708.1 Protein Homology CDS 4268411 4269049 . - 0 ID=cds3696;Parent=gene3819;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11 NC_009708.1 RefSeq gene 4269762 4270337 . - . ID=gene3820;Name=YPSIP31758_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20295;old_locus_tag=YpsIP31758_3784 NC_009708.1 Protein Homology CDS 4269762 4270337 . - 0 ID=cds3697;Parent=gene3820;Dbxref=Genbank:WP_012105841.1;Name=WP_012105841.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_012105841.1;transl_table=11 NC_009708.1 RefSeq gene 4270521 4271099 . - . ID=gene3821;Name=YPSIP31758_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20300;old_locus_tag=YpsIP31758_3785 NC_009708.1 Protein Homology CDS 4270521 4271099 . - 0 ID=cds3698;Parent=gene3821;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11 NC_009708.1 RefSeq gene 4271163 4272200 . - . ID=gene3822;Name=YPSIP31758_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20305;old_locus_tag=YpsIP31758_3786 NC_009708.1 Protein Homology CDS 4271163 4272200 . - 0 ID=cds3699;Parent=gene3822;Dbxref=Genbank:WP_012105842.1;Name=WP_012105842.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_012105842.1;transl_table=11 NC_009708.1 RefSeq gene 4272222 4272677 . - . ID=gene3823;Name=YPSIP31758_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20310;old_locus_tag=YpsIP31758_3787 NC_009708.1 Protein Homology CDS 4272222 4272677 . - 0 ID=cds3700;Parent=gene3823;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11 NC_009708.1 RefSeq gene 4272710 4273894 . - . ID=gene3824;Name=YPSIP31758_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20315;old_locus_tag=YpsIP31758_3788 NC_009708.1 Protein Homology CDS 4272710 4273894 . - 0 ID=cds3701;Parent=gene3824;Dbxref=Genbank:WP_002209075.1;Name=WP_002209075.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209075.1;transl_table=11 NC_009708.1 RefSeq gene 4273894 4274487 . - . ID=gene3825;Name=YPSIP31758_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20320;old_locus_tag=YpsIP31758_3789 NC_009708.1 Protein Homology CDS 4273894 4274487 . - 0 ID=cds3702;Parent=gene3825;Dbxref=Genbank:WP_011191586.1;Name=WP_011191586.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_011191586.1;transl_table=11 NC_009708.1 RefSeq gene 4274763 4275824 . + . ID=gene3826;Name=YPSIP31758_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20325;old_locus_tag=YpsIP31758_3790 NC_009708.1 Protein Homology CDS 4274763 4275824 . + 0 ID=cds3703;Parent=gene3826;Dbxref=Genbank:WP_012105843.1;Name=WP_012105843.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105843.1;transl_table=11 NC_009708.1 RefSeq gene 4275836 4276972 . + . ID=gene3827;Name=YPSIP31758_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20330;old_locus_tag=YpsIP31758_3791 NC_009708.1 Protein Homology CDS 4275836 4276972 . + 0 ID=cds3704;Parent=gene3827;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11 NC_009708.1 RefSeq gene 4276965 4277777 . + . ID=gene3828;Name=YPSIP31758_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20335;old_locus_tag=YpsIP31758_3792 NC_009708.1 Protein Homology CDS 4276965 4277777 . + 0 ID=cds3705;Parent=gene3828;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11 NC_009708.1 RefSeq gene 4277770 4278849 . + . ID=gene3829;Name=YPSIP31758_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20340;old_locus_tag=YpsIP31758_3793 NC_009708.1 Protein Homology CDS 4277770 4278849 . + 0 ID=cds3706;Parent=gene3829;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11 NC_009708.1 RefSeq gene 4278849 4279808 . + . ID=gene3830;Name=YPSIP31758_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20345;old_locus_tag=YpsIP31758_3794 NC_009708.1 Protein Homology CDS 4278849 4279808 . + 0 ID=cds3707;Parent=gene3830;Dbxref=Genbank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209069.1;transl_table=11 NC_009708.1 RefSeq gene 4280205 4280693 . + . ID=gene3831;Name=YPSIP31758_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20350;old_locus_tag=YpsIP31758_3795 NC_009708.1 Protein Homology CDS 4280205 4280693 . + 0 ID=cds3708;Parent=gene3831;Dbxref=Genbank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NC_009708.1 RefSeq gene 4281008 4281808 . + . ID=gene3832;Name=YPSIP31758_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20355;old_locus_tag=YpsIP31758_3796 NC_009708.1 Protein Homology CDS 4281008 4281808 . + 0 ID=cds3709;Parent=gene3832;Dbxref=Genbank:WP_002209067.1;Name=WP_002209067.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NC_009708.1 RefSeq gene 4282149 4283462 . + . ID=gene3833;Name=YPSIP31758_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20360;old_locus_tag=YpsIP31758_3797 NC_009708.1 Protein Homology CDS 4282149 4283462 . + 0 ID=cds3710;Parent=gene3833;Dbxref=Genbank:WP_012105844.1;Name=WP_012105844.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=heme utilization radical SAM enzyme HutW;protein_id=WP_012105844.1;transl_table=11 NC_009708.1 RefSeq gene 4283495 4284022 . + . ID=gene3834;Name=YPSIP31758_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20365;old_locus_tag=YpsIP31758_3798 NC_009708.1 Protein Homology CDS 4283495 4284022 . + 0 ID=cds3711;Parent=gene3834;Dbxref=Genbank:WP_032466021.1;Name=WP_032466021.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_032466021.1;transl_table=11 NC_009708.1 RefSeq gene 4284056 4284706 . + . ID=gene3835;Name=YPSIP31758_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20370;old_locus_tag=YpsIP31758_3799 NC_009708.1 Protein Homology CDS 4284056 4284706 . + 0 ID=cds3712;Parent=gene3835;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11 NC_009708.1 RefSeq gene 4284822 4285115 . - . ID=gene3836;Name=YPSIP31758_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20375 NC_009708.1 GeneMarkS+ CDS 4284822 4285115 . - 0 ID=cds3713;Parent=gene3836;Dbxref=Genbank:WP_032466020.1;Name=WP_032466020.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466020.1;transl_table=11 NC_009708.1 RefSeq gene 4285114 4287144 . + . ID=gene3837;Name=YPSIP31758_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20380;old_locus_tag=YpsIP31758_3801 NC_009708.1 Protein Homology CDS 4285114 4287144 . + 0 ID=cds3714;Parent=gene3837;Dbxref=Genbank:WP_011191580.1;Name=WP_011191580.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_011191580.1;transl_table=11 NC_009708.1 RefSeq gene 4287263 4288300 . + . ID=gene3838;Name=YPSIP31758_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20385;old_locus_tag=YpsIP31758_3802 NC_009708.1 Protein Homology CDS 4287263 4288300 . + 0 ID=cds3715;Parent=gene3838;Dbxref=Genbank:WP_012105845.1;Name=WP_012105845.1;gbkey=CDS;product=hemin transporter;protein_id=WP_012105845.1;transl_table=11 NC_009708.1 RefSeq gene 4288297 4289136 . + . ID=gene3839;Name=YPSIP31758_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20390;old_locus_tag=YpsIP31758_3803 NC_009708.1 Protein Homology CDS 4288297 4289136 . + 0 ID=cds3716;Parent=gene3839;Dbxref=Genbank:WP_002209060.1;Name=WP_002209060.1;gbkey=CDS;product=hemin-binding periplasmic protein HmuT;protein_id=WP_002209060.1;transl_table=11 NC_009708.1 RefSeq gene 4289133 4290137 . + . ID=gene3840;Name=YPSIP31758_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20395;old_locus_tag=YpsIP31758_3804 NC_009708.1 Protein Homology CDS 4289133 4290137 . + 0 ID=cds3717;Parent=gene3840;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NC_009708.1 RefSeq gene 4290130 4290930 . + . ID=gene3841;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20400;old_locus_tag=YpsIP31758_3805 NC_009708.1 Protein Homology CDS 4290130 4290930 . + 0 ID=cds3718;Parent=gene3841;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11 NC_009708.1 RefSeq gene 4291071 4292252 . - . ID=gene3842;Name=YPSIP31758_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20405;old_locus_tag=YpsIP31758_3806 NC_009708.1 Protein Homology CDS 4291071 4292252 . - 0 ID=cds3719;Parent=gene3842;Dbxref=Genbank:WP_012105846.1;Name=WP_012105846.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_012105846.1;transl_table=11 NC_009708.1 RefSeq gene 4292298 4293584 . - . ID=gene3843;Name=YPSIP31758_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20410;old_locus_tag=YpsIP31758_3807 NC_009708.1 Protein Homology CDS 4292298 4293584 . - 0 ID=cds3720;Parent=gene3843;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11 NC_009708.1 RefSeq gene 4293754 4294737 . + . ID=gene3844;Name=YPSIP31758_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20415;old_locus_tag=YpsIP31758_3808 NC_009708.1 Protein Homology CDS 4293754 4294737 . + 0 ID=cds3721;Parent=gene3844;Dbxref=Genbank:WP_002209056.1;Name=WP_002209056.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11 NC_009708.1 RefSeq gene 4294815 4295084 . - . ID=gene3845;Name=YPSIP31758_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20420;old_locus_tag=YpsIP31758_3809 NC_009708.1 Protein Homology CDS 4294815 4295084 . - 0 ID=cds3722;Parent=gene3845;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11 NC_009708.1 RefSeq gene 4295081 4296295 . - . ID=gene3846;Name=YPSIP31758_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20425;old_locus_tag=YpsIP31758_3810 NC_009708.1 Protein Homology CDS 4295081 4296295 . - 0 ID=cds3723;Parent=gene3846;Dbxref=Genbank:WP_012105847.1;Name=WP_012105847.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105847.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4296384 4296556 . + . ID=id331;gbkey=repeat_region NC_009708.1 RefSeq gene 4296675 4297742 . - . ID=gene3847;Name=YPSIP31758_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20430;old_locus_tag=YpsIP31758_3811 NC_009708.1 Protein Homology CDS 4296675 4297742 . - 0 ID=cds3724;Parent=gene3847;Dbxref=Genbank:WP_041175802.1;Name=WP_041175802.1;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_041175802.1;transl_table=11 NC_009708.1 RefSeq gene 4297732 4298526 . - . ID=gene3848;Name=YPSIP31758_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20435;old_locus_tag=YpsIP31758_3812 NC_009708.1 Protein Homology CDS 4297732 4298526 . - 0 ID=cds3725;Parent=gene3848;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11 NC_009708.1 RefSeq gene 4298528 4298821 . - . ID=gene3849;Name=YPSIP31758_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20440;old_locus_tag=YpsIP31758_3813 NC_009708.1 Protein Homology CDS 4298528 4298821 . - 0 ID=cds3726;Parent=gene3849;Dbxref=Genbank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_002209051.1;transl_table=11 NC_009708.1 RefSeq gene 4298818 4299468 . - . ID=gene3850;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPSIP31758_RS20445;old_locus_tag=YpsIP31758_3814 NC_009708.1 Protein Homology CDS 4298818 4299468 . - 0 ID=cds3727;Parent=gene3850;Dbxref=Genbank:WP_002221023.1;Name=WP_002221023.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=flagellar biosynthesis protein FliP;protein_id=WP_002221023.1;transl_table=11 NC_009708.1 RefSeq gene 4299595 4300557 . - . ID=gene3851;Name=YPSIP31758_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20450;old_locus_tag=YpsIP31758_3815 NC_009708.1 Protein Homology CDS 4299595 4300557 . - 0 ID=cds3728;Parent=gene3851;Dbxref=Genbank:WP_012105849.1;Name=WP_012105849.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_012105849.1;transl_table=11 NC_009708.1 RefSeq gene 4300535 4300933 . - . ID=gene3852;Name=YPSIP31758_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20455;old_locus_tag=YpsIP31758_3816 NC_009708.1 Protein Homology CDS 4300535 4300933 . - 0 ID=cds3729;Parent=gene3852;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NC_009708.1 RefSeq gene 4300914 4301315 . - . ID=gene3853;Name=YPSIP31758_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20460;old_locus_tag=YpsIP31758_3817 NC_009708.1 Protein Homology CDS 4300914 4301315 . - 0 ID=cds3730;Parent=gene3853;Dbxref=Genbank:WP_012105850.1;Name=WP_012105850.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_012105850.1;transl_table=11 NC_009708.1 RefSeq gene 4301312 4302649 . - . ID=gene3854;Name=YPSIP31758_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20465;old_locus_tag=YpsIP31758_3818 NC_009708.1 Protein Homology CDS 4301312 4302649 . - 0 ID=cds3731;Parent=gene3854;Dbxref=Genbank:WP_012105851.1;Name=WP_012105851.1;gbkey=CDS;product=type III secretion system ATPase;protein_id=WP_012105851.1;transl_table=11 NC_009708.1 RefSeq gene 4302636 4304690 . - . ID=gene3855;Name=YPSIP31758_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20470;old_locus_tag=YpsIP31758_3819 NC_009708.1 Protein Homology CDS 4302636 4304690 . - 0 ID=cds3732;Parent=gene3855;Dbxref=Genbank:WP_042592672.1;Name=WP_042592672.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_042592672.1;transl_table=11 NC_009708.1 RefSeq gene 4304677 4305324 . - . ID=gene3856;Name=YPSIP31758_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20475;old_locus_tag=YpsIP31758_3820 NC_009708.1 Protein Homology CDS 4304677 4305324 . - 0 ID=cds3733;Parent=gene3856;Dbxref=Genbank:WP_012105853.1;Name=WP_012105853.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_012105853.1;transl_table=11 NC_009708.1 RefSeq gene 4305321 4305914 . - . ID=gene3857;Name=YPSIP31758_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20480;old_locus_tag=YpsIP31758_3821 NC_009708.1 Protein Homology CDS 4305321 4305914 . - 0 ID=cds3734;Parent=gene3857;Dbxref=Genbank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209043.1;transl_table=11 NC_009708.1 RefSeq gene 4306109 4306840 . - . ID=gene3858;Name=YPSIP31758_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20485;old_locus_tag=YpsIP31758_3822 NC_009708.1 Protein Homology CDS 4306109 4306840 . - 0 ID=cds3735;Parent=gene3858;Dbxref=Genbank:WP_011191572.1;Name=WP_011191572.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_011191572.1;transl_table=11 NC_009708.1 RefSeq gene 4306837 4307088 . - . ID=gene3859;Name=YPSIP31758_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20490;old_locus_tag=YpsIP31758_3824 NC_009708.1 Protein Homology CDS 4306837 4307088 . - 0 ID=cds3736;Parent=gene3859;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11 NC_009708.1 RefSeq gene 4307186 4307434 . - . ID=gene3860;Name=YPSIP31758_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20495;old_locus_tag=YpsIP31758_3825 NC_009708.1 Protein Homology CDS 4307186 4307434 . - 0 ID=cds3737;Parent=gene3860;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11 NC_009708.1 RefSeq gene 4307431 4307646 . - . ID=gene3861;Name=YPSIP31758_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20500;old_locus_tag=YpsIP31758_3826 NC_009708.1 Protein Homology CDS 4307431 4307646 . - 0 ID=cds3738;Parent=gene3861;Dbxref=Genbank:WP_002216328.1;Name=WP_002216328.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002216328.1;transl_table=11 NC_009708.1 RefSeq gene 4307656 4308363 . - . ID=gene3862;Name=YPSIP31758_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20505;old_locus_tag=YpsIP31758_3827 NC_009708.1 Protein Homology CDS 4307656 4308363 . - 0 ID=cds3739;Parent=gene3862;Dbxref=Genbank:WP_011171760.1;Name=WP_011171760.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011171760.1;transl_table=11 NC_009708.1 RefSeq gene 4308470 4308691 . - . ID=gene3863;Name=YPSIP31758_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20510;old_locus_tag=YpsIP31758_3828 NC_009708.1 Protein Homology CDS 4308470 4308691 . - 0 ID=cds3740;Parent=gene3863;Dbxref=Genbank:WP_012105855.1;Name=WP_012105855.1;gbkey=CDS;product=type III secretion system protein YseE family;protein_id=WP_012105855.1;transl_table=11 NC_009708.1 RefSeq gene 4308710 4309924 . - . ID=gene3864;Name=YPSIP31758_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20515;old_locus_tag=YpsIP31758_3829 NC_009708.1 Protein Homology CDS 4308710 4309924 . - 0 ID=cds3741;Parent=gene3864;Dbxref=Genbank:WP_011191568.1;Name=WP_011191568.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_011191568.1;transl_table=11 NC_009708.1 RefSeq gene 4309926 4311425 . - . ID=gene3865;Name=YPSIP31758_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20520;old_locus_tag=YpsIP31758_3830 NC_009708.1 Protein Homology CDS 4309926 4311425 . - 0 ID=cds3742;Parent=gene3865;Dbxref=Genbank:WP_032466605.1;Name=WP_032466605.1;gbkey=CDS;product=outer membrane secretin SsaC;protein_id=WP_032466605.1;transl_table=11 NC_009708.1 RefSeq gene 4311670 4314489 . + . ID=gene3866;Name=YPSIP31758_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20525;old_locus_tag=YpsIP31758_3832 NC_009708.1 Protein Homology CDS 4311670 4314489 . + 0 ID=cds3743;Parent=gene3866;Dbxref=Genbank:WP_012105858.1;Name=WP_012105858.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_012105858.1;transl_table=11 NC_009708.1 RefSeq gene 4314503 4315135 . + . ID=gene3867;Name=YPSIP31758_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20530;old_locus_tag=YpsIP31758_3833 NC_009708.1 Protein Homology CDS 4314503 4315135 . + 0 ID=cds3744;Parent=gene3867;Dbxref=Genbank:WP_012105859.1;Name=WP_012105859.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105859.1;transl_table=11 NC_009708.1 RefSeq gene 4315330 4316646 . - . ID=gene3868;Name=YPSIP31758_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20535;old_locus_tag=YpsIP31758_3834 NC_009708.1 Protein Homology CDS 4315330 4316646 . - 0 ID=cds3745;Parent=gene3868;Dbxref=Genbank:WP_011191564.1;Name=WP_011191564.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_011191564.1;transl_table=11 NC_009708.1 RefSeq gene 4317501 4319459 . + . ID=gene3869;Name=YPSIP31758_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20540;old_locus_tag=YpsIP31758_3835 NC_009708.1 Protein Homology CDS 4317501 4319459 . + 0 ID=cds3746;Parent=gene3869;Dbxref=Genbank:WP_011191563.1;Name=WP_011191563.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_011191563.1;transl_table=11 NC_009708.1 RefSeq gene 4319516 4319827 . + . ID=gene3870;Name=YPSIP31758_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20545;old_locus_tag=YpsIP31758_3836 NC_009708.1 Protein Homology CDS 4319516 4319827 . + 0 ID=cds3747;Parent=gene3870;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11 NC_009708.1 RefSeq gene 4319824 4321479 . + . ID=gene3871;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20550;old_locus_tag=YpsIP31758_3837 NC_009708.1 Protein Homology CDS 4319824 4321479 . + 0 ID=cds3748;Parent=gene3871;Dbxref=Genbank:WP_012105860.1;Name=WP_012105860.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_012105860.1;transl_table=11 NC_009708.1 RefSeq gene 4321548 4322705 . - . ID=gene3872;Name=YPSIP31758_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20555;old_locus_tag=YpsIP31758_3838 NC_009708.1 Protein Homology CDS 4321548 4322705 . - 0 ID=cds3749;Parent=gene3872;Dbxref=Genbank:WP_041175803.1;Name=WP_041175803.1;gbkey=CDS;product=hydrolase;protein_id=WP_041175803.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4323516 4329221 . + . ID=id332;gbkey=repeat_region NC_009708.1 RefSeq gene 4323715 4323830 . - . ID=gene3873;Name=YPSIP31758_RS20565;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS20565;old_locus_tag=YpsIP31758_4282 NC_009708.1 cmsearch rRNA 4323715 4323830 . - . ID=rna115;Parent=gene3873;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 4323715 4323830 . - . ID=id333;Parent=rna115;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq gene 4323922 4326855 . - . ID=gene3874;Name=YPSIP31758_RS20570;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS20570;old_locus_tag=YpsIP31758_4283 NC_009708.1 RefSeq rRNA 4323922 4326855 . - . ID=rna116;Parent=gene3874;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq exon 4323922 4326855 . - . ID=id334;Parent=rna116;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq gene 4327098 4327173 . - . ID=gene3875;Name=YPSIP31758_RS20575;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS20575;old_locus_tag=YpsIP31758_4284 NC_009708.1 tRNAscan-SE tRNA 4327098 4327173 . - . ID=rna117;Parent=gene3875;anticodon=(pos:complement(4327137..4327139));gbkey=tRNA;product=tRNA-Glu NC_009708.1 tRNAscan-SE exon 4327098 4327173 . - . ID=id335;Parent=rna117;anticodon=(pos:complement(4327137..4327139));gbkey=tRNA;product=tRNA-Glu NC_009708.1 RefSeq gene 4327307 4328855 . - . ID=gene3876;Name=YPSIP31758_RS20580;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS20580;old_locus_tag=YpsIP31758_4285 NC_009708.1 RefSeq rRNA 4327307 4328855 . - . ID=rna118;Parent=gene3876;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq exon 4327307 4328855 . - . ID=id336;Parent=rna118;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq gene 4329123 4329353 . - . ID=gene3877;Name=YPSIP31758_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22605 NC_009708.1 Protein Homology CDS 4329123 4329353 . - 0 ID=cds3750;Parent=gene3877;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11 NC_009708.1 RefSeq gene 4329535 4331124 . + . ID=gene3878;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20590;old_locus_tag=YpsIP31758_3843 NC_009708.1 Protein Homology CDS 4329535 4331124 . + 0 ID=cds3751;Parent=gene3878;Dbxref=Genbank:WP_002210692.1;Name=WP_002210692.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_002210692.1;transl_table=11 NC_009708.1 RefSeq gene 4331184 4332470 . + . ID=gene3879;Name=YPSIP31758_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20595;old_locus_tag=YpsIP31758_3844 NC_009708.1 Protein Homology CDS 4331184 4332470 . + 0 ID=cds3752;Parent=gene3879;Dbxref=Genbank:WP_002210691.1;Name=WP_002210691.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_002210691.1;transl_table=11 NC_009708.1 RefSeq gene 4332618 4333271 . - . ID=gene3880;Name=YPSIP31758_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20600;old_locus_tag=YpsIP31758_3845 NC_009708.1 Protein Homology CDS 4332618 4333271 . - 0 ID=cds3753;Parent=gene3880;Dbxref=Genbank:WP_012303442.1;Name=WP_012303442.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303442.1;transl_table=11 NC_009708.1 RefSeq gene 4333321 4333596 . - . ID=gene3881;Name=YPSIP31758_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20605;old_locus_tag=YpsIP31758_3846 NC_009708.1 Protein Homology CDS 4333321 4333596 . - 0 ID=cds3754;Parent=gene3881;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11 NC_009708.1 RefSeq gene 4333785 4334375 . - . ID=gene3882;Name=YPSIP31758_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20610;old_locus_tag=YpsIP31758_3847 NC_009708.1 Protein Homology CDS 4333785 4334375 . - 0 ID=cds3755;Parent=gene3882;Dbxref=Genbank:WP_002230622.1;Name=WP_002230622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230622.1;transl_table=11 NC_009708.1 RefSeq gene 4334421 4335125 . - . ID=gene3883;Name=YPSIP31758_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20615;old_locus_tag=YpsIP31758_3848 NC_009708.1 Protein Homology CDS 4334421 4335125 . - 0 ID=cds3756;Parent=gene3883;Dbxref=Genbank:WP_011191556.1;Name=WP_011191556.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_011191556.1;transl_table=11 NC_009708.1 RefSeq gene 4335191 4336258 . - . ID=gene3884;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20620;old_locus_tag=YpsIP31758_3849 NC_009708.1 Protein Homology CDS 4335191 4336258 . - 0 ID=cds3757;Parent=gene3884;Dbxref=Genbank:WP_011191555.1;Name=WP_011191555.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_011191555.1;transl_table=11 NC_009708.1 RefSeq gene 4336377 4337120 . - . ID=gene3885;Name=YPSIP31758_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20625;old_locus_tag=YpsIP31758_3850 NC_009708.1 Protein Homology CDS 4336377 4337120 . - 0 ID=cds3758;Parent=gene3885;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11 NC_009708.1 RefSeq gene 4337255 4338037 . - . ID=gene3886;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20630;old_locus_tag=YpsIP31758_3851 NC_009708.1 Protein Homology CDS 4337255 4338037 . - 0 ID=cds3759;Parent=gene3886;Dbxref=Genbank:WP_011191554.1;Name=WP_011191554.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_011191554.1;transl_table=11 NC_009708.1 RefSeq gene 4338134 4338643 . + . ID=gene3887;Name=YPSIP31758_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20635;old_locus_tag=YpsIP31758_3852 NC_009708.1 Protein Homology CDS 4338134 4338643 . + 0 ID=cds3760;Parent=gene3887;Dbxref=Genbank:WP_011191553.1;Name=WP_011191553.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_011191553.1;transl_table=11 NC_009708.1 RefSeq gene 4338766 4339025 . + . ID=gene3888;Name=YPSIP31758_RS22610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22610;pseudo=true NC_009708.1 Protein Homology CDS 4338766 4339025 . + 0 ID=cds3761;Parent=gene3888;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 4339018 4341063 . + . ID=gene3889;Name=YPSIP31758_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20645;old_locus_tag=YpsIP31758_3853 NC_009708.1 Protein Homology CDS 4339018 4341063 . + 0 ID=cds3762;Parent=gene3889;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11 NC_009708.1 RefSeq gene 4341050 4341724 . + . ID=gene3890;Name=YPSIP31758_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20650;old_locus_tag=YpsIP31758_3854 NC_009708.1 Protein Homology CDS 4341050 4341724 . + 0 ID=cds3763;Parent=gene3890;Dbxref=Genbank:WP_012303440.1;Name=WP_012303440.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_012303440.1;transl_table=11 NC_009708.1 RefSeq gene 4341714 4342511 . + . ID=gene3891;Name=YPSIP31758_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20655;old_locus_tag=YpsIP31758_3855 NC_009708.1 Protein Homology CDS 4341714 4342511 . + 0 ID=cds3764;Parent=gene3891;Dbxref=Genbank:WP_012105863.1;Name=WP_012105863.1;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=WP_012105863.1;transl_table=11 NC_009708.1 RefSeq gene 4342508 4342723 . + . ID=gene3892;Name=YPSIP31758_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20660 NC_009708.1 Protein Homology CDS 4342508 4342723 . + 0 ID=cds3765;Parent=gene3892;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11 NC_009708.1 RefSeq gene 4342725 4343540 . + . ID=gene3893;Name=YPSIP31758_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20665;old_locus_tag=YpsIP31758_3856 NC_009708.1 Protein Homology CDS 4342725 4343540 . + 0 ID=cds3766;Parent=gene3893;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NC_009708.1 RefSeq gene 4343533 4344663 . + . ID=gene3894;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20670;old_locus_tag=YpsIP31758_3857 NC_009708.1 Protein Homology CDS 4343533 4344663 . + 0 ID=cds3767;Parent=gene3894;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11 NC_009708.1 RefSeq gene 4344706 4344819 . - . ID=gene3895;Name=YPSIP31758_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20675 NC_009708.1 Protein Homology CDS 4344706 4344819 . - 0 ID=cds3768;Parent=gene3895;Dbxref=Genbank:WP_002224232.1;Name=WP_002224232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224232.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4344879 4345601 . + . ID=id337;gbkey=repeat_region NC_009708.1 RefSeq gene 4344991 4345449 . - . ID=gene3896;Name=YPSIP31758_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20680;old_locus_tag=YpsIP31758_3858 NC_009708.1 Protein Homology CDS 4344991 4345449 . - 0 ID=cds3769;Parent=gene3896;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 4345680 4349900 . - . ID=gene3897;Name=YPSIP31758_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20685;old_locus_tag=YpsIP31758_3859 NC_009708.1 Protein Homology CDS 4345680 4349900 . - 0 ID=cds3770;Parent=gene3897;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NC_009708.1 RefSeq gene 4350029 4354057 . - . ID=gene3898;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20690;old_locus_tag=YpsIP31758_3860 NC_009708.1 Protein Homology CDS 4350029 4354057 . - 0 ID=cds3771;Parent=gene3898;Dbxref=Genbank:WP_002210676.1;Name=WP_002210676.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002210676.1;transl_table=11 NC_009708.1 RefSeq gene 4354400 4354768 . - . ID=gene3899;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20695;old_locus_tag=YpsIP31758_3861 NC_009708.1 Protein Homology CDS 4354400 4354768 . - 0 ID=cds3772;Parent=gene3899;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NC_009708.1 RefSeq gene 4354835 4355332 . - . ID=gene3900;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20700;old_locus_tag=YpsIP31758_3862 NC_009708.1 Protein Homology CDS 4354835 4355332 . - 0 ID=cds3773;Parent=gene3900;Dbxref=Genbank:WP_002210674.1;Name=WP_002210674.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NC_009708.1 RefSeq gene 4355697 4356401 . - . ID=gene3901;Name=YPSIP31758_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20705;old_locus_tag=YpsIP31758_3863 NC_009708.1 Protein Homology CDS 4355697 4356401 . - 0 ID=cds3774;Parent=gene3901;Dbxref=Genbank:WP_002210673.1;Name=WP_002210673.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NC_009708.1 RefSeq gene 4356405 4356833 . - . ID=gene3902;Name=YPSIP31758_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20710;old_locus_tag=YpsIP31758_3864 NC_009708.1 Protein Homology CDS 4356405 4356833 . - 0 ID=cds3775;Parent=gene3902;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NC_009708.1 RefSeq gene 4357024 4357569 . - . ID=gene3903;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20715;old_locus_tag=YpsIP31758_3865 NC_009708.1 Protein Homology CDS 4357024 4357569 . - 0 ID=cds3776;Parent=gene3903;Dbxref=Genbank:WP_002210671.1;Name=WP_002210671.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NC_009708.1 RefSeq gene 4357571 4357954 . - . ID=gene3904;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20720;old_locus_tag=YpsIP31758_3866 NC_009708.1 Protein Homology CDS 4357571 4357954 . - 0 ID=cds3777;Parent=gene3904;Dbxref=Genbank:WP_002210670.1;Name=WP_002210670.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NC_009708.1 RefSeq gene 4358205 4359389 . - . ID=gene3905;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20725;old_locus_tag=YpsIP31758_3867 NC_009708.1 Protein Homology CDS 4358205 4359389 . - 0 ID=cds3778;Parent=gene3905;Dbxref=Genbank:WP_002210669.1;Name=WP_002210669.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NC_009708.1 RefSeq gene 4359498 4359573 . - . ID=gene3906;Name=YPSIP31758_RS20730;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS20730;old_locus_tag=YpsIP31758_4286 NC_009708.1 tRNAscan-SE tRNA 4359498 4359573 . - . ID=rna119;Parent=gene3906;anticodon=(pos:complement(4359538..4359540));gbkey=tRNA;product=tRNA-Thr NC_009708.1 tRNAscan-SE exon 4359498 4359573 . - . ID=id338;Parent=rna119;anticodon=(pos:complement(4359538..4359540));gbkey=tRNA;product=tRNA-Thr NC_009708.1 RefSeq gene 4359580 4359654 . - . ID=gene3907;Name=YPSIP31758_RS20735;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS20735;old_locus_tag=YpsIP31758_4287 NC_009708.1 tRNAscan-SE tRNA 4359580 4359654 . - . ID=rna120;Parent=gene3907;anticodon=(pos:complement(4359619..4359621));gbkey=tRNA;product=tRNA-Gly NC_009708.1 tRNAscan-SE exon 4359580 4359654 . - . ID=id339;Parent=rna120;anticodon=(pos:complement(4359619..4359621));gbkey=tRNA;product=tRNA-Gly NC_009708.1 RefSeq gene 4359804 4359888 . - . ID=gene3908;Name=YPSIP31758_RS20740;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS20740;old_locus_tag=YpsIP31758_4288 NC_009708.1 tRNAscan-SE tRNA 4359804 4359888 . - . ID=rna121;Parent=gene3908;anticodon=(pos:complement(4359852..4359854));gbkey=tRNA;product=tRNA-Tyr NC_009708.1 tRNAscan-SE exon 4359804 4359888 . - . ID=id340;Parent=rna121;anticodon=(pos:complement(4359852..4359854));gbkey=tRNA;product=tRNA-Tyr NC_009708.1 RefSeq gene 4359907 4359982 . - . ID=gene3909;Name=YPSIP31758_RS20745;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS20745;old_locus_tag=YpsIP31758_4289 NC_009708.1 tRNAscan-SE tRNA 4359907 4359982 . - . ID=rna122;Parent=gene3909;anticodon=(pos:complement(4359947..4359949));gbkey=tRNA;product=tRNA-Thr NC_009708.1 tRNAscan-SE exon 4359907 4359982 . - . ID=id341;Parent=rna122;anticodon=(pos:complement(4359947..4359949));gbkey=tRNA;product=tRNA-Thr NC_009708.1 RefSeq gene 4360378 4360923 . + . ID=gene3910;Name=YPSIP31758_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20750;old_locus_tag=YpsIP31758_3868 NC_009708.1 Protein Homology CDS 4360378 4360923 . + 0 ID=cds3779;Parent=gene3910;Dbxref=Genbank:WP_012105864.1;Name=WP_012105864.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_012105864.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4361039 4361753 . + . ID=id342;gbkey=repeat_region NC_009708.1 RefSeq gene 4361147 4361605 . - . ID=gene3911;Name=YPSIP31758_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20755;old_locus_tag=YpsIP31758_3869 NC_009708.1 Protein Homology CDS 4361147 4361605 . - 0 ID=cds3780;Parent=gene3911;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_009708.1 RefSeq gene 4361844 4362794 . + . ID=gene3912;Name=YPSIP31758_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20760;old_locus_tag=YpsIP31758_3870 NC_009708.1 Protein Homology CDS 4361844 4362794 . + 0 ID=cds3781;Parent=gene3912;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NC_009708.1 RefSeq gene 4362829 4363788 . - . ID=gene3913;Name=YPSIP31758_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20765;old_locus_tag=YpsIP31758_3871 NC_009708.1 Protein Homology CDS 4362829 4363788 . - 0 ID=cds3782;Parent=gene3913;Dbxref=Genbank:WP_002212289.1;Name=WP_002212289.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_002212289.1;transl_table=11 NC_009708.1 RefSeq gene 4363785 4364822 . - . ID=gene3914;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20770;old_locus_tag=YpsIP31758_3872 NC_009708.1 Protein Homology CDS 4363785 4364822 . - 0 ID=cds3783;Parent=gene3914;Dbxref=Genbank:WP_011191549.1;Name=WP_011191549.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_011191549.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4365210 4370853 . + . ID=id343;gbkey=repeat_region NC_009708.1 RefSeq gene 4365286 4365401 . - . ID=gene3915;Name=YPSIP31758_RS20775;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS20775;old_locus_tag=YpsIP31758_4290 NC_009708.1 cmsearch rRNA 4365286 4365401 . - . ID=rna123;Parent=gene3915;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 cmsearch exon 4365286 4365401 . - . ID=id344;Parent=rna123;gbkey=rRNA;product=5S ribosomal RNA NC_009708.1 RefSeq gene 4365493 4368426 . - . ID=gene3916;Name=YPSIP31758_RS20780;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS20780;old_locus_tag=YpsIP31758_4291 NC_009708.1 RefSeq rRNA 4365493 4368426 . - . ID=rna124;Parent=gene3916;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq exon 4365493 4368426 . - . ID=id345;Parent=rna124;gbkey=rRNA;product=23S ribosomal RNA NC_009708.1 RefSeq gene 4368636 4368711 . - . ID=gene3917;Name=YPSIP31758_RS20785;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS20785;old_locus_tag=YpsIP31758_4292 NC_009708.1 tRNAscan-SE tRNA 4368636 4368711 . - . ID=rna125;Parent=gene3917;anticodon=(pos:complement(4368676..4368678));gbkey=tRNA;product=tRNA-Ala NC_009708.1 tRNAscan-SE exon 4368636 4368711 . - . ID=id346;Parent=rna125;anticodon=(pos:complement(4368676..4368678));gbkey=tRNA;product=tRNA-Ala NC_009708.1 RefSeq gene 4368763 4368839 . - . ID=gene3918;Name=YPSIP31758_RS20790;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS20790;old_locus_tag=YpsIP31758_4293 NC_009708.1 tRNAscan-SE tRNA 4368763 4368839 . - . ID=rna126;Parent=gene3918;anticodon=(pos:complement(4368803..4368805));gbkey=tRNA;product=tRNA-Ile NC_009708.1 tRNAscan-SE exon 4368763 4368839 . - . ID=id347;Parent=rna126;anticodon=(pos:complement(4368803..4368805));gbkey=tRNA;product=tRNA-Ile NC_009708.1 RefSeq gene 4368939 4370487 . - . ID=gene3919;Name=YPSIP31758_RS20795;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPSIP31758_RS20795;old_locus_tag=YpsIP31758_4294 NC_009708.1 RefSeq rRNA 4368939 4370487 . - . ID=rna127;Parent=gene3919;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq exon 4368939 4370487 . - . ID=id348;Parent=rna127;gbkey=rRNA;product=16S ribosomal RNA NC_009708.1 RefSeq gene 4371036 4371578 . + . ID=gene3920;Name=YPSIP31758_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20805;old_locus_tag=YpsIP31758_3876 NC_009708.1 Protein Homology CDS 4371036 4371578 . + 0 ID=cds3784;Parent=gene3920;Dbxref=Genbank:WP_002230372.1;Name=WP_002230372.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002230372.1;transl_table=11 NC_009708.1 RefSeq gene 4371633 4372454 . - . ID=gene3921;Name=YPSIP31758_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20810;old_locus_tag=YpsIP31758_3877 NC_009708.1 Protein Homology CDS 4371633 4372454 . - 0 ID=cds3785;Parent=gene3921;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11 NC_009708.1 RefSeq gene 4372463 4373035 . - . ID=gene3922;Name=YPSIP31758_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20815;old_locus_tag=YpsIP31758_3878 NC_009708.1 Protein Homology CDS 4372463 4373035 . - 0 ID=cds3786;Parent=gene3922;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11 NC_009708.1 RefSeq gene 4373037 4373576 . - . ID=gene3923;Name=YPSIP31758_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20820;old_locus_tag=YpsIP31758_3879 NC_009708.1 Protein Homology CDS 4373037 4373576 . - 0 ID=cds3787;Parent=gene3923;Dbxref=Genbank:WP_012105865.1;Name=WP_012105865.1;gbkey=CDS;product=DNA topoisomerase;protein_id=WP_012105865.1;transl_table=11 NC_009708.1 RefSeq gene 4373617 4374090 . - . ID=gene3924;Name=YPSIP31758_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20825;old_locus_tag=YpsIP31758_3880 NC_009708.1 Protein Homology CDS 4373617 4374090 . - 0 ID=cds3788;Parent=gene3924;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11 NC_009708.1 RefSeq gene 4374062 4375183 . - . ID=gene3925;Name=YPSIP31758_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20830;old_locus_tag=YpsIP31758_3881 NC_009708.1 Protein Homology CDS 4374062 4375183 . - 0 ID=cds3789;Parent=gene3925;Dbxref=Genbank:WP_002209022.1;Name=WP_002209022.1;gbkey=CDS;product=DNA processing protein DprA;protein_id=WP_002209022.1;transl_table=11 NC_009708.1 RefSeq gene 4375318 4375830 . + . ID=gene3926;Name=YPSIP31758_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20835;old_locus_tag=YpsIP31758_3882 NC_009708.1 Protein Homology CDS 4375318 4375830 . + 0 ID=cds3790;Parent=gene3926;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NC_009708.1 RefSeq gene 4375855 4376802 . + . ID=gene3927;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20840;old_locus_tag=YpsIP31758_3883 NC_009708.1 Protein Homology CDS 4375855 4376802 . + 0 ID=cds3791;Parent=gene3927;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NC_009708.1 RefSeq gene 4376896 4378185 . + . ID=gene3928;Name=YPSIP31758_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20845;old_locus_tag=YpsIP31758_3884 NC_009708.1 Protein Homology CDS 4376896 4378185 . + 0 ID=cds3792;Parent=gene3928;Dbxref=Genbank:WP_002215705.1;Name=WP_002215705.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_002215705.1;transl_table=11 NC_009708.1 RefSeq gene 4378241 4379617 . + . ID=gene3929;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=YPSIP31758_RS20850;old_locus_tag=YpsIP31758_3885 NC_009708.1 Protein Homology CDS 4378241 4379617 . + 0 ID=cds3793;Parent=gene3929;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11 NC_009708.1 RefSeq gene 4379756 4380169 . + . ID=gene3930;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20855;old_locus_tag=YpsIP31758_3886 NC_009708.1 Protein Homology CDS 4379756 4380169 . + 0 ID=cds3794;Parent=gene3930;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11 NC_009708.1 RefSeq gene 4380279 4380479 . - . ID=gene3931;Name=YPSIP31758_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20860;old_locus_tag=YpsIP31758_3887 NC_009708.1 Protein Homology CDS 4380279 4380479 . - 0 ID=cds3795;Parent=gene3931;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11 NC_009708.1 RefSeq gene 4380567 4380992 . - . ID=gene3932;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20865;old_locus_tag=YpsIP31758_3888 NC_009708.1 Protein Homology CDS 4380567 4380992 . - 0 ID=cds3796;Parent=gene3932;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NC_009708.1 RefSeq gene 4381439 4381828 . - . ID=gene3933;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20870;old_locus_tag=YpsIP31758_3889 NC_009708.1 Protein Homology CDS 4381439 4381828 . - 0 ID=cds3797;Parent=gene3933;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NC_009708.1 RefSeq gene 4381869 4382858 . - . ID=gene3934;Name=YPSIP31758_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20875;old_locus_tag=YpsIP31758_3890 NC_009708.1 Protein Homology CDS 4381869 4382858 . - 0 ID=cds3798;Parent=gene3934;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NC_009708.1 RefSeq gene 4382884 4383504 . - . ID=gene3935;Name=YPSIP31758_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20880;old_locus_tag=YpsIP31758_3891 NC_009708.1 Protein Homology CDS 4382884 4383504 . - 0 ID=cds3799;Parent=gene3935;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NC_009708.1 RefSeq gene 4383535 4383924 . - . ID=gene3936;Name=YPSIP31758_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20885;old_locus_tag=YpsIP31758_3892 NC_009708.1 Protein Homology CDS 4383535 4383924 . - 0 ID=cds3800;Parent=gene3936;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NC_009708.1 RefSeq gene 4383941 4384297 . - . ID=gene3937;Name=YPSIP31758_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20890;old_locus_tag=YpsIP31758_3893 NC_009708.1 Protein Homology CDS 4383941 4384297 . - 0 ID=cds3801;Parent=gene3937;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NC_009708.1 RefSeq gene 4384445 4384561 . - . ID=gene3938;Name=YPSIP31758_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20895 NC_009708.1 Protein Homology CDS 4384445 4384561 . - 0 ID=cds3802;Parent=gene3938;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NC_009708.1 RefSeq gene 4384595 4385926 . - . ID=gene3939;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20900;old_locus_tag=YpsIP31758_3894 NC_009708.1 Protein Homology CDS 4384595 4385926 . - 0 ID=cds3803;Parent=gene3939;Dbxref=Genbank:WP_002213344.1;Name=WP_002213344.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NC_009708.1 RefSeq gene 4385934 4386368 . - . ID=gene3940;Name=YPSIP31758_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20905;old_locus_tag=YpsIP31758_3895 NC_009708.1 Protein Homology CDS 4385934 4386368 . - 0 ID=cds3804;Parent=gene3940;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NC_009708.1 RefSeq gene 4386372 4386551 . - . ID=gene3941;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20910;old_locus_tag=YpsIP31758_3896 NC_009708.1 Protein Homology CDS 4386372 4386551 . - 0 ID=cds3805;Parent=gene3941;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NC_009708.1 RefSeq gene 4386554 4387057 . - . ID=gene3942;Name=YPSIP31758_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20915;old_locus_tag=YpsIP31758_3897 NC_009708.1 Protein Homology CDS 4386554 4387057 . - 0 ID=cds3806;Parent=gene3942;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NC_009708.1 RefSeq gene 4387072 4387425 . - . ID=gene3943;Name=YPSIP31758_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20920;old_locus_tag=YpsIP31758_3898 NC_009708.1 Protein Homology CDS 4387072 4387425 . - 0 ID=cds3807;Parent=gene3943;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NC_009708.1 RefSeq gene 4387435 4387968 . - . ID=gene3944;Name=YPSIP31758_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20925;old_locus_tag=YpsIP31758_3899 NC_009708.1 Protein Homology CDS 4387435 4387968 . - 0 ID=cds3808;Parent=gene3944;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NC_009708.1 RefSeq gene 4387983 4388375 . - . ID=gene3945;Name=YPSIP31758_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20930;old_locus_tag=YpsIP31758_3900 NC_009708.1 Protein Homology CDS 4387983 4388375 . - 0 ID=cds3809;Parent=gene3945;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NC_009708.1 RefSeq gene 4388409 4388714 . - . ID=gene3946;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20935;old_locus_tag=YpsIP31758_3901 NC_009708.1 Protein Homology CDS 4388409 4388714 . - 0 ID=cds3810;Parent=gene3946;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NC_009708.1 RefSeq gene 4388728 4389267 . - . ID=gene3947;Name=YPSIP31758_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20940;old_locus_tag=YpsIP31758_3902 NC_009708.1 Protein Homology CDS 4388728 4389267 . - 0 ID=cds3811;Parent=gene3947;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NC_009708.1 RefSeq gene 4389282 4389596 . - . ID=gene3948;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20945;old_locus_tag=YpsIP31758_3903 NC_009708.1 Protein Homology CDS 4389282 4389596 . - 0 ID=cds3812;Parent=gene3948;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NC_009708.1 RefSeq gene 4389607 4389978 . - . ID=gene3949;Name=YPSIP31758_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20950;old_locus_tag=YpsIP31758_3904 NC_009708.1 Protein Homology CDS 4389607 4389978 . - 0 ID=cds3813;Parent=gene3949;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4390185 4390901 . + . ID=id349;gbkey=repeat_region NC_009708.1 RefSeq gene 4390295 4390753 . - . ID=gene3950;Name=YPSIP31758_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20955;old_locus_tag=YpsIP31758_3905 NC_009708.1 Protein Homology CDS 4390295 4390753 . - 0 ID=cds3814;Parent=gene3950;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_009708.1 RefSeq gene 4390858 4391124 . - . ID=gene3951;Name=YPSIP31758_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20960;old_locus_tag=YpsIP31758_3906 NC_009708.1 Protein Homology CDS 4390858 4391124 . - 0 ID=cds3815;Parent=gene3951;Dbxref=Genbank:WP_049756389.1;Name=WP_049756389.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_049756389.1;transl_table=11 NC_009708.1 RefSeq gene 4391124 4391315 . - . ID=gene3952;Name=YPSIP31758_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20965;old_locus_tag=YpsIP31758_3907 NC_009708.1 Protein Homology CDS 4391124 4391315 . - 0 ID=cds3816;Parent=gene3952;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NC_009708.1 RefSeq gene 4391315 4391725 . - . ID=gene3953;Name=YPSIP31758_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20970;old_locus_tag=YpsIP31758_3908 NC_009708.1 Protein Homology CDS 4391315 4391725 . - 0 ID=cds3817;Parent=gene3953;Dbxref=Genbank:WP_002218940.1;Name=WP_002218940.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11 NC_009708.1 RefSeq gene 4391738 4392436 . - . ID=gene3954;Name=YPSIP31758_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20975;old_locus_tag=YpsIP31758_3909 NC_009708.1 Protein Homology CDS 4391738 4392436 . - 0 ID=cds3818;Parent=gene3954;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NC_009708.1 RefSeq gene 4392454 4392786 . - . ID=gene3955;Name=YPSIP31758_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20980;old_locus_tag=YpsIP31758_3910 NC_009708.1 Protein Homology CDS 4392454 4392786 . - 0 ID=cds3819;Parent=gene3955;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NC_009708.1 RefSeq gene 4392801 4393079 . - . ID=gene3956;Name=YPSIP31758_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20985;old_locus_tag=YpsIP31758_3911 NC_009708.1 Protein Homology CDS 4392801 4393079 . - 0 ID=cds3820;Parent=gene3956;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NC_009708.1 RefSeq gene 4393094 4393918 . - . ID=gene3957;Name=YPSIP31758_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20990;old_locus_tag=YpsIP31758_3912 NC_009708.1 Protein Homology CDS 4393094 4393918 . - 0 ID=cds3821;Parent=gene3957;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NC_009708.1 RefSeq gene 4393935 4394237 . - . ID=gene3958;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS20995;old_locus_tag=YpsIP31758_3913 NC_009708.1 Protein Homology CDS 4393935 4394237 . - 0 ID=cds3822;Parent=gene3958;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NC_009708.1 RefSeq gene 4394234 4394839 . - . ID=gene3959;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21000;old_locus_tag=YpsIP31758_3914 NC_009708.1 Protein Homology CDS 4394234 4394839 . - 0 ID=cds3823;Parent=gene3959;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NC_009708.1 RefSeq gene 4394856 4395485 . - . ID=gene3960;Name=YPSIP31758_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21005;old_locus_tag=YpsIP31758_3915 NC_009708.1 Protein Homology CDS 4394856 4395485 . - 0 ID=cds3824;Parent=gene3960;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NC_009708.1 RefSeq gene 4395518 4395829 . - . ID=gene3961;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YPSIP31758_RS21010;old_locus_tag=YpsIP31758_3916 NC_009708.1 Protein Homology CDS 4395518 4395829 . - 0 ID=cds3825;Parent=gene3961;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NC_009708.1 RefSeq gene 4396243 4396716 . - . ID=gene3962;Name=YPSIP31758_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21015;old_locus_tag=YpsIP31758_3917 NC_009708.1 Protein Homology CDS 4396243 4396716 . - 0 ID=cds3826;Parent=gene3962;Dbxref=Genbank:WP_012105867.1;Name=WP_012105867.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_012105867.1;transl_table=11 NC_009708.1 RefSeq gene 4396795 4396989 . - . ID=gene3963;Name=YPSIP31758_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21020 NC_009708.1 Protein Homology CDS 4396795 4396989 . - 0 ID=cds3827;Parent=gene3963;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NC_009708.1 RefSeq gene 4397128 4398312 . - . ID=gene3964;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21025;old_locus_tag=YpsIP31758_3918 NC_009708.1 Protein Homology CDS 4397128 4398312 . - 0 ID=cds3828;Parent=gene3964;Dbxref=Genbank:WP_002212326.1;Name=WP_002212326.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NC_009708.1 RefSeq gene 4398384 4400492 . - . ID=gene3965;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21030;old_locus_tag=YpsIP31758_3919 NC_009708.1 Protein Homology CDS 4398384 4400492 . - 0 ID=cds3829;Parent=gene3965;Dbxref=Genbank:WP_002212325.1;Name=WP_002212325.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NC_009708.1 RefSeq gene 4400586 4401056 . - . ID=gene3966;Name=YPSIP31758_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21035;old_locus_tag=YpsIP31758_3920 NC_009708.1 Protein Homology CDS 4400586 4401056 . - 0 ID=cds3830;Parent=gene3966;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NC_009708.1 RefSeq gene 4401153 4401527 . - . ID=gene3967;Name=YPSIP31758_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21040;old_locus_tag=YpsIP31758_3921 NC_009708.1 Protein Homology CDS 4401153 4401527 . - 0 ID=cds3831;Parent=gene3967;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NC_009708.1 RefSeq gene 4401665 4401952 . - . ID=gene3968;Name=YPSIP31758_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21045;old_locus_tag=YpsIP31758_3922 NC_009708.1 Protein Homology CDS 4401665 4401952 . - 0 ID=cds3832;Parent=gene3968;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11 NC_009708.1 RefSeq gene 4401972 4402337 . - . ID=gene3969;Name=YPSIP31758_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21050;old_locus_tag=YpsIP31758_3923 NC_009708.1 Protein Homology CDS 4401972 4402337 . - 0 ID=cds3833;Parent=gene3969;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11 NC_009708.1 RefSeq gene 4402337 4402732 . - . ID=gene3970;Name=YPSIP31758_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21055;old_locus_tag=YpsIP31758_3924 NC_009708.1 Protein Homology CDS 4402337 4402732 . - 0 ID=cds3834;Parent=gene3970;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11 NC_009708.1 RefSeq gene 4402732 4403454 . - . ID=gene3971;Name=YPSIP31758_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21060;old_locus_tag=YpsIP31758_3925 NC_009708.1 Protein Homology CDS 4402732 4403454 . - 0 ID=cds3835;Parent=gene3971;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11 NC_009708.1 RefSeq gene 4403708 4404508 . - . ID=gene3972;Name=YPSIP31758_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21065;old_locus_tag=YpsIP31758_3926 NC_009708.1 Protein Homology CDS 4403708 4404508 . - 0 ID=cds3836;Parent=gene3972;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NC_009708.1 RefSeq gene 4404823 4405041 . + . ID=gene3973;Name=YPSIP31758_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21070;old_locus_tag=YpsIP31758_3927 NC_009708.1 Protein Homology CDS 4404823 4405041 . + 0 ID=cds3837;Parent=gene3973;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NC_009708.1 RefSeq gene 4405242 4405841 . - . ID=gene3974;Name=YPSIP31758_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21075;old_locus_tag=YpsIP31758_3928 NC_009708.1 Protein Homology CDS 4405242 4405841 . - 0 ID=cds3838;Parent=gene3974;Dbxref=Genbank:WP_012105868.1;Name=WP_012105868.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_012105868.1;transl_table=11 NC_009708.1 RefSeq gene 4405936 4406157 . - . ID=gene3975;Name=YPSIP31758_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21080;old_locus_tag=YpsIP31758_3929 NC_009708.1 Protein Homology CDS 4405936 4406157 . - 0 ID=cds3839;Parent=gene3975;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11 NC_009708.1 RefSeq gene 4406173 4407981 . - . ID=gene3976;Name=YPSIP31758_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21085;old_locus_tag=YpsIP31758_3930 NC_009708.1 Protein Homology CDS 4406173 4407981 . - 0 ID=cds3840;Parent=gene3976;Dbxref=Genbank:WP_012105869.1;Name=WP_012105869.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_012105869.1;transl_table=11 NC_009708.1 RefSeq gene 4407985 4408533 . - . ID=gene3977;Name=YPSIP31758_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21090;old_locus_tag=YpsIP31758_3931 NC_009708.1 Protein Homology CDS 4407985 4408533 . - 0 ID=cds3841;Parent=gene3977;Dbxref=Genbank:WP_012105870.1;Name=WP_012105870.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_012105870.1;transl_table=11 NC_009708.1 RefSeq gene 4408784 4410706 . + . ID=gene3978;Name=YPSIP31758_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21095;old_locus_tag=YpsIP31758_3932 NC_009708.1 Protein Homology CDS 4408784 4410706 . + 0 ID=cds3842;Parent=gene3978;Dbxref=Genbank:WP_002230378.1;Name=WP_002230378.1;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002230378.1;transl_table=11 NC_009708.1 RefSeq gene 4410841 4411830 . + . ID=gene3979;Name=YPSIP31758_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21100;old_locus_tag=YpsIP31758_3933 NC_009708.1 Protein Homology CDS 4410841 4411830 . + 0 ID=cds3843;Parent=gene3979;Dbxref=Genbank:WP_012105871.1;Name=WP_012105871.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_012105871.1;transl_table=11 NC_009708.1 RefSeq gene 4411923 4412903 . + . ID=gene3980;Name=YPSIP31758_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21105;old_locus_tag=YpsIP31758_3934 NC_009708.1 Protein Homology CDS 4411923 4412903 . + 0 ID=cds3844;Parent=gene3980;Dbxref=Genbank:WP_012105872.1;Name=WP_012105872.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_012105872.1;transl_table=11 NC_009708.1 RefSeq gene 4412916 4413764 . - . ID=gene3981;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21110;old_locus_tag=YpsIP31758_3935 NC_009708.1 Protein Homology CDS 4412916 4413764 . - 0 ID=cds3845;Parent=gene3981;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NC_009708.1 RefSeq gene 4413761 4414615 . - . ID=gene3982;Name=YPSIP31758_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21115;old_locus_tag=YpsIP31758_3936 NC_009708.1 Protein Homology CDS 4413761 4414615 . - 0 ID=cds3846;Parent=gene3982;Dbxref=Genbank:WP_002212309.1;Name=WP_002212309.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_002212309.1;transl_table=11 NC_009708.1 RefSeq gene 4414612 4415379 . - . ID=gene3983;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21120;old_locus_tag=YpsIP31758_3937 NC_009708.1 Protein Homology CDS 4414612 4415379 . - 0 ID=cds3847;Parent=gene3983;Dbxref=Genbank:WP_002212307.1;Name=WP_002212307.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_002212307.1;transl_table=11 NC_009708.1 RefSeq gene 4415388 4416431 . - . ID=gene3984;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21125;old_locus_tag=YpsIP31758_3938 NC_009708.1 Protein Homology CDS 4415388 4416431 . - 0 ID=cds3848;Parent=gene3984;Dbxref=Genbank:WP_012105873.1;Name=WP_012105873.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_012105873.1;transl_table=11 NC_009708.1 RefSeq gene 4416634 4417236 . - . ID=gene3985;Name=YPSIP31758_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21130;old_locus_tag=YpsIP31758_3939 NC_009708.1 Protein Homology CDS 4416634 4417236 . - 0 ID=cds3849;Parent=gene3985;Dbxref=Genbank:WP_011193221.1;Name=WP_011193221.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_011193221.1;transl_table=11 NC_009708.1 RefSeq gene 4417338 4418318 . + . ID=gene3986;Name=YPSIP31758_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21135;old_locus_tag=YpsIP31758_3940 NC_009708.1 Protein Homology CDS 4417338 4418318 . + 0 ID=cds3850;Parent=gene3986;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NC_009708.1 RefSeq gene 4418315 4418551 . + . ID=gene3987;Name=YPSIP31758_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21140;old_locus_tag=YpsIP31758_3941 NC_009708.1 Protein Homology CDS 4418315 4418551 . + 0 ID=cds3851;Parent=gene3987;Dbxref=Genbank:WP_011193222.1;Name=WP_011193222.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193222.1;transl_table=11 NC_009708.1 RefSeq gene 4418700 4419569 . + . ID=gene3988;Name=YPSIP31758_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21145;old_locus_tag=YpsIP31758_3942 NC_009708.1 Protein Homology CDS 4418700 4419569 . + 0 ID=cds3852;Parent=gene3988;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NC_009708.1 RefSeq gene 4419747 4420178 . - . ID=gene3989;Name=YPSIP31758_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21150;old_locus_tag=YpsIP31758_3943 NC_009708.1 Protein Homology CDS 4419747 4420178 . - 0 ID=cds3853;Parent=gene3989;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11 NC_009708.1 RefSeq gene 4420250 4420657 . - . ID=gene3990;Name=YPSIP31758_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21155;old_locus_tag=YpsIP31758_3944 NC_009708.1 Protein Homology CDS 4420250 4420657 . - 0 ID=cds3854;Parent=gene3990;Dbxref=Genbank:WP_012105874.1;Name=WP_012105874.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105874.1;transl_table=11 NC_009708.1 RefSeq gene 4420994 4421626 . + . ID=gene3991;Name=YPSIP31758_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21160;old_locus_tag=YpsIP31758_3945 NC_009708.1 Protein Homology CDS 4420994 4421626 . + 0 ID=cds3855;Parent=gene3991;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11 NC_009708.1 RefSeq gene 4421706 4423826 . + . ID=gene3992;Name=YPSIP31758_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21165;old_locus_tag=YpsIP31758_3946 NC_009708.1 Protein Homology CDS 4421706 4423826 . + 0 ID=cds3856;Parent=gene3992;Dbxref=Genbank:WP_012105875.1;Name=WP_012105875.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105875.1;transl_table=11 NC_009708.1 RefSeq gene 4423871 4425088 . - . ID=gene3993;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21170;old_locus_tag=YpsIP31758_3947 NC_009708.1 Protein Homology CDS 4423871 4425088 . - 0 ID=cds3857;Parent=gene3993;Dbxref=Genbank:WP_012105876.1;Name=WP_012105876.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=succinyldiaminopimelate aminotransferase;protein_id=WP_012105876.1;transl_table=11 NC_009708.1 RefSeq gene 4425221 4425796 . - . ID=gene3994;Name=YPSIP31758_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21175;old_locus_tag=YpsIP31758_3948 NC_009708.1 Protein Homology CDS 4425221 4425796 . - 0 ID=cds3858;Parent=gene3994;Dbxref=Genbank:WP_002223842.1;Name=WP_002223842.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_002223842.1;transl_table=11 NC_009708.1 RefSeq gene 4426040 4427581 . - . ID=gene3995;Name=YPSIP31758_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21180;old_locus_tag=YpsIP31758_3949 NC_009708.1 Protein Homology CDS 4426040 4427581 . - 0 ID=cds3859;Parent=gene3995;Dbxref=Genbank:WP_012105877.1;Name=WP_012105877.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105877.1;transl_table=11 NC_009708.1 RefSeq gene 4427907 4428476 . - . ID=gene3996;Name=YPSIP31758_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21185;old_locus_tag=YpsIP31758_3950 NC_009708.1 Protein Homology CDS 4427907 4428476 . - 0 ID=cds3860;Parent=gene3996;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11 NC_009708.1 RefSeq gene 4429006 4430319 . + . ID=gene3997;Name=YPSIP31758_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21190;old_locus_tag=YpsIP31758_3951 NC_009708.1 Protein Homology CDS 4429006 4430319 . + 0 ID=cds3861;Parent=gene3997;Dbxref=Genbank:WP_011193227.1;Name=WP_011193227.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_011193227.1;transl_table=11 NC_009708.1 RefSeq gene 4430589 4431575 . + . ID=gene3998;Name=YPSIP31758_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21195;old_locus_tag=YpsIP31758_3952 NC_009708.1 Protein Homology CDS 4430589 4431575 . + 0 ID=cds3862;Parent=gene3998;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NC_009708.1 RefSeq gene 4431670 4433715 . - . ID=gene3999;Name=YPSIP31758_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21200;old_locus_tag=YpsIP31758_3953 NC_009708.1 Protein Homology CDS 4431670 4433715 . - 0 ID=cds3863;Parent=gene3999;Dbxref=Genbank:WP_012105878.1;Name=WP_012105878.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_012105878.1;transl_table=11 NC_009708.1 RefSeq gene 4434201 4435385 . + . ID=gene4000;Name=YPSIP31758_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21205;old_locus_tag=YpsIP31758_3954 NC_009708.1 Protein Homology CDS 4434201 4435385 . + 0 ID=cds3864;Parent=gene4000;Dbxref=Genbank:WP_011193229.1;Name=WP_011193229.1;gbkey=CDS;product=protein TsgA;protein_id=WP_011193229.1;transl_table=11 NC_009708.1 RefSeq gene 4435470 4436768 . - . ID=gene4001;Name=YPSIP31758_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21210;old_locus_tag=YpsIP31758_3955 NC_009708.1 Protein Homology CDS 4435470 4436768 . - 0 ID=cds3865;Parent=gene4001;Dbxref=Genbank:WP_002228747.1;Name=WP_002228747.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NC_009708.1 RefSeq gene 4437090 4439636 . + . ID=gene4002;Name=YPSIP31758_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21215;old_locus_tag=YpsIP31758_3956 NC_009708.1 Protein Homology CDS 4437090 4439636 . + 0 ID=cds3866;Parent=gene4002;Dbxref=Genbank:WP_012105879.1;Name=WP_012105879.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_012105879.1;transl_table=11 NC_009708.1 RefSeq gene 4439633 4439959 . + . ID=gene4003;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21220;old_locus_tag=YpsIP31758_3957 NC_009708.1 Protein Homology CDS 4439633 4439959 . + 0 ID=cds3867;Parent=gene4003;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11 NC_009708.1 RefSeq gene 4440150 4440956 . + . ID=gene4004;Name=YPSIP31758_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21225;old_locus_tag=YpsIP31758_3958 NC_009708.1 Protein Homology CDS 4440150 4440956 . + 0 ID=cds3868;Parent=gene4004;Dbxref=Genbank:WP_012105880.1;Name=WP_012105880.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_012105880.1;transl_table=11 NC_009708.1 RefSeq gene 4441019 4442440 . + . ID=gene4005;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21230;old_locus_tag=YpsIP31758_3959 NC_009708.1 Protein Homology CDS 4441019 4442440 . + 0 ID=cds3869;Parent=gene4005;Dbxref=Genbank:WP_011193232.1;Name=WP_011193232.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase 2;protein_id=WP_011193232.1;transl_table=11 NC_009708.1 RefSeq gene 4442559 4443599 . - . ID=gene4006;Name=YPSIP31758_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21235;old_locus_tag=YpsIP31758_3960 NC_009708.1 Protein Homology CDS 4442559 4443599 . - 0 ID=cds3870;Parent=gene4006;Dbxref=Genbank:WP_012105881.1;Name=WP_012105881.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_012105881.1;transl_table=11 NC_009708.1 RefSeq gene 4443601 4444299 . - . ID=gene4007;Name=YPSIP31758_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21240;old_locus_tag=YpsIP31758_3961 NC_009708.1 Protein Homology CDS 4443601 4444299 . - 0 ID=cds3871;Parent=gene4007;Dbxref=Genbank:WP_002208892.1;Name=WP_002208892.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NC_009708.1 RefSeq gene 4444292 4444969 . - . ID=gene4008;Name=YPSIP31758_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21245;old_locus_tag=YpsIP31758_3962 NC_009708.1 Protein Homology CDS 4444292 4444969 . - 0 ID=cds3872;Parent=gene4008;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NC_009708.1 RefSeq gene 4445272 4446087 . - . ID=gene4009;Name=YPSIP31758_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21250;old_locus_tag=YpsIP31758_3963 NC_009708.1 Protein Homology CDS 4445272 4446087 . - 0 ID=cds3873;Parent=gene4009;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11 NC_009708.1 RefSeq gene 4446171 4447160 . - . ID=gene4010;Name=YPSIP31758_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21255;old_locus_tag=YpsIP31758_3964 NC_009708.1 Protein Homology CDS 4446171 4447160 . - 0 ID=cds3874;Parent=gene4010;Dbxref=Genbank:WP_002208897.1;Name=WP_002208897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208897.1;transl_table=11 NC_009708.1 RefSeq gene 4447414 4448502 . - . ID=gene4011;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21260;old_locus_tag=YpsIP31758_3965 NC_009708.1 Protein Homology CDS 4447414 4448502 . - 0 ID=cds3875;Parent=gene4011;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NC_009708.1 RefSeq gene 4448559 4449080 . - . ID=gene4012;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21265;old_locus_tag=YpsIP31758_3966 NC_009708.1 Protein Homology CDS 4448559 4449080 . - 0 ID=cds3876;Parent=gene4012;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11 NC_009708.1 RefSeq gene 4449429 4450553 . - . ID=gene4013;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21270;old_locus_tag=YpsIP31758_3967 NC_009708.1 Protein Homology CDS 4449429 4450553 . - 0 ID=cds3877;Parent=gene4013;Dbxref=Genbank:WP_002228144.1;Name=WP_002228144.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_002228144.1;transl_table=11 NC_009708.1 RefSeq gene 4450588 4451007 . + . ID=gene4014;Name=YPSIP31758_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21275 NC_009708.1 Protein Homology CDS 4450588 4451007 . + 0 ID=cds3878;Parent=gene4014;Dbxref=Genbank:WP_041175805.1;Name=WP_041175805.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175805.1;transl_table=11 NC_009708.1 RefSeq gene 4451010 4451369 . - . ID=gene4015;Name=YPSIP31758_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21280;old_locus_tag=YpsIP31758_3968 NC_009708.1 Protein Homology CDS 4451010 4451369 . - 0 ID=cds3879;Parent=gene4015;Dbxref=Genbank:WP_012105883.1;Name=WP_012105883.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105883.1;transl_table=11 NC_009708.1 RefSeq gene 4451389 4451970 . - . ID=gene4016;Name=YPSIP31758_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21285;old_locus_tag=YpsIP31758_3969 NC_009708.1 Protein Homology CDS 4451389 4451970 . - 0 ID=cds3880;Parent=gene4016;Dbxref=Genbank:WP_012105884.1;Name=WP_012105884.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105884.1;transl_table=11 NC_009708.1 RefSeq gene 4451963 4452568 . - . ID=gene4017;Name=YPSIP31758_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21290;old_locus_tag=YpsIP31758_3970 NC_009708.1 Protein Homology CDS 4451963 4452568 . - 0 ID=cds3881;Parent=gene4017;Dbxref=Genbank:WP_012105885.1;Name=WP_012105885.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_012105885.1;transl_table=11 NC_009708.1 RefSeq gene 4452568 4453464 . - . ID=gene4018;Name=YPSIP31758_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21295;old_locus_tag=YpsIP31758_3971 NC_009708.1 Protein Homology CDS 4452568 4453464 . - 0 ID=cds3882;Parent=gene4018;Dbxref=Genbank:WP_012105886.1;Name=WP_012105886.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_012105886.1;transl_table=11 NC_009708.1 RefSeq gene 4453584 4456139 . + . ID=gene4019;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21300;old_locus_tag=YpsIP31758_3972 NC_009708.1 Protein Homology CDS 4453584 4456139 . + 0 ID=cds3883;Parent=gene4019;Dbxref=Genbank:WP_002208906.1;Name=WP_002208906.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_002208906.1;transl_table=11 NC_009708.1 RefSeq gene 4456276 4456821 . - . ID=gene4020;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21305;old_locus_tag=YpsIP31758_3973 NC_009708.1 Protein Homology CDS 4456276 4456821 . - 0 ID=cds3884;Parent=gene4020;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11 NC_009708.1 RefSeq gene 4456934 4457128 . - . ID=gene4021;Name=YPSIP31758_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21310 NC_009708.1 Protein Homology CDS 4456934 4457128 . - 0 ID=cds3885;Parent=gene4021;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11 NC_009708.1 RefSeq gene 4457408 4459555 . + . ID=gene4022;Name=YPSIP31758_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21315;old_locus_tag=YpsIP31758_3974 NC_009708.1 Protein Homology CDS 4457408 4459555 . + 0 ID=cds3886;Parent=gene4022;Dbxref=Genbank:WP_011193239.1;Name=WP_011193239.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_011193239.1;transl_table=11 NC_009708.1 RefSeq gene 4459699 4460379 . + . ID=gene4023;Name=YPSIP31758_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21320;old_locus_tag=YpsIP31758_3975 NC_009708.1 Protein Homology CDS 4459699 4460379 . + 0 ID=cds3887;Parent=gene4023;Dbxref=Genbank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;product=nucleotidase;protein_id=WP_002208909.1;transl_table=11 NC_009708.1 RefSeq gene 4460408 4460815 . + . ID=gene4024;Name=YPSIP31758_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21325;old_locus_tag=YpsIP31758_3976 NC_009708.1 Protein Homology CDS 4460408 4460815 . + 0 ID=cds3888;Parent=gene4024;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NC_009708.1 RefSeq gene 4460978 4461859 . + . ID=gene4025;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21330;old_locus_tag=YpsIP31758_3977 NC_009708.1 Protein Homology CDS 4460978 4461859 . + 0 ID=cds3889;Parent=gene4025;Dbxref=Genbank:WP_002208911.1;Name=WP_002208911.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_002208911.1;transl_table=11 NC_009708.1 RefSeq gene 4462056 4463675 . + . ID=gene4026;Name=YPSIP31758_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21335;old_locus_tag=YpsIP31758_3978 NC_009708.1 Protein Homology CDS 4462056 4463675 . + 0 ID=cds3890;Parent=gene4026;Dbxref=Genbank:WP_012105887.1;Name=WP_012105887.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_012105887.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4463742 4463897 . + . ID=id350;gbkey=repeat_region NC_009708.1 RefSeq gene 4463911 4465263 . - . ID=gene4027;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=YPSIP31758_RS21340;old_locus_tag=YpsIP31758_3979 NC_009708.1 Protein Homology CDS 4463911 4465263 . - 0 ID=cds3891;Parent=gene4027;Dbxref=Genbank:WP_012105888.1;Name=WP_012105888.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_012105888.1;transl_table=11 NC_009708.1 RefSeq gene 4465260 4465979 . - . ID=gene4028;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21345;old_locus_tag=YpsIP31758_3980 NC_009708.1 Protein Homology CDS 4465260 4465979 . - 0 ID=cds3892;Parent=gene4028;Dbxref=Genbank:WP_004393220.1;Name=WP_004393220.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_004393220.1;transl_table=11 NC_009708.1 RefSeq gene 4466115 4466630 . - . ID=gene4029;Name=YPSIP31758_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21350;old_locus_tag=YpsIP31758_3981 NC_009708.1 Protein Homology CDS 4466115 4466630 . - 0 ID=cds3893;Parent=gene4029;Dbxref=Genbank:WP_012105889.1;Name=WP_012105889.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_012105889.1;transl_table=11 NC_009708.1 RefSeq gene 4467164 4469539 . + . ID=gene4030;Name=YPSIP31758_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21355;old_locus_tag=YpsIP31758_3982 NC_009708.1 Protein Homology CDS 4467164 4469539 . + 0 ID=cds3894;Parent=gene4030;Dbxref=Genbank:WP_012105890.1;Name=WP_012105890.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_012105890.1;transl_table=11 NC_009708.1 RefSeq gene 4469921 4470067 . - . ID=gene4031;Name=YPSIP31758_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21360;old_locus_tag=YpsIP31758_3983 NC_009708.1 Protein Homology CDS 4469921 4470067 . - 0 ID=cds3895;Parent=gene4031;Dbxref=Genbank:WP_012105891.1;Name=WP_012105891.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105891.1;transl_table=11 NC_009708.1 RefSeq gene 4470062 4470289 . + . ID=gene4032;Name=YPSIP31758_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21365;old_locus_tag=YpsIP31758_3984 NC_009708.1 Protein Homology CDS 4470062 4470289 . + 0 ID=cds3896;Parent=gene4032;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11 NC_009708.1 RefSeq gene 4470381 4472696 . + . ID=gene4033;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21370;old_locus_tag=YpsIP31758_3985 NC_009708.1 Protein Homology CDS 4470381 4472696 . + 0 ID=cds3897;Parent=gene4033;Dbxref=Genbank:WP_012105892.1;Name=WP_012105892.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_012105892.1;transl_table=11 NC_009708.1 RefSeq gene 4472732 4472989 . + . ID=gene4034;Name=YPSIP31758_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21375;old_locus_tag=YpsIP31758_3986 NC_009708.1 Protein Homology CDS 4472732 4472989 . + 0 ID=cds3898;Parent=gene4034;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11 NC_009708.1 RefSeq gene 4473127 4473396 . - . ID=gene4035;Name=YPSIP31758_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21380;old_locus_tag=YpsIP31758_3987 NC_009708.1 Protein Homology CDS 4473127 4473396 . - 0 ID=cds3899;Parent=gene4035;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11 NC_009708.1 RefSeq gene 4473566 4474342 . - . ID=gene4036;Name=YPSIP31758_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21385;old_locus_tag=YpsIP31758_3988 NC_009708.1 Protein Homology CDS 4473566 4474342 . - 0 ID=cds3900;Parent=gene4036;Dbxref=Genbank:WP_002208922.1;Name=WP_002208922.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_002208922.1;transl_table=11 NC_009708.1 RefSeq gene 4474429 4475130 . + . ID=gene4037;Name=YPSIP31758_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21390;old_locus_tag=YpsIP31758_3989 NC_009708.1 Protein Homology CDS 4474429 4475130 . + 0 ID=cds3901;Parent=gene4037;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11 NC_009708.1 RefSeq gene 4475190 4475765 . + . ID=gene4038;Name=YPSIP31758_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21395;old_locus_tag=YpsIP31758_3990 NC_009708.1 Protein Homology CDS 4475190 4475765 . + 0 ID=cds3902;Parent=gene4038;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4475839 4475949 . + . ID=id351;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4475975 4476085 . + . ID=id352;gbkey=repeat_region NC_009708.1 RefSeq gene 4476086 4478182 . - . ID=gene4039;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21400;old_locus_tag=YpsIP31758_3992 NC_009708.1 Protein Homology CDS 4476086 4478182 . - 0 ID=cds3903;Parent=gene4039;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NC_009708.1 RefSeq gene 4478195 4480600 . - . ID=gene4040;Name=YPSIP31758_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21405;old_locus_tag=YpsIP31758_3993 NC_009708.1 Protein Homology CDS 4478195 4480600 . - 0 ID=cds3904;Parent=gene4040;Dbxref=Genbank:WP_012105894.1;Name=WP_012105894.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_012105894.1;transl_table=11 NC_009708.1 RefSeq gene 4480918 4483629 . + . ID=gene4041;Name=YPSIP31758_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21410;old_locus_tag=YpsIP31758_3994 NC_009708.1 Protein Homology CDS 4480918 4483629 . + 0 ID=cds3905;Parent=gene4041;Dbxref=Genbank:WP_002208926.1;Name=WP_002208926.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208926.1;transl_table=11 NC_009708.1 RefSeq gene 4484003 4484332 . + . ID=gene4042;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21415;old_locus_tag=YpsIP31758_3995 NC_009708.1 Protein Homology CDS 4484003 4484332 . + 0 ID=cds3906;Parent=gene4042;Dbxref=Genbank:WP_002218928.1;Name=WP_002218928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002218928.1;transl_table=11 NC_009708.1 RefSeq gene 4484350 4485186 . + . ID=gene4043;Name=YPSIP31758_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21420;old_locus_tag=YpsIP31758_3996 NC_009708.1 Protein Homology CDS 4484350 4485186 . + 0 ID=cds3907;Parent=gene4043;Dbxref=Genbank:WP_002216348.1;Name=WP_002216348.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_002216348.1;transl_table=11 NC_009708.1 RefSeq gene 4485221 4485979 . + . ID=gene4044;Name=YPSIP31758_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21425;old_locus_tag=YpsIP31758_3997 NC_009708.1 Protein Homology CDS 4485221 4485979 . + 0 ID=cds3908;Parent=gene4044;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4486016 4486565 . + . ID=id353;gbkey=repeat_region NC_009708.1 RefSeq gene 4486617 4486886 . - . ID=gene4045;Name=YPSIP31758_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21430 NC_009708.1 Protein Homology CDS 4486617 4486886 . - 0 ID=cds3909;Parent=gene4045;Dbxref=Genbank:WP_038401699.1;Name=WP_038401699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401699.1;transl_table=11 NC_009708.1 RefSeq gene 4487188 4487652 . - . ID=gene4046;Name=YPSIP31758_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21435;old_locus_tag=YpsIP31758_3999 NC_009708.1 Protein Homology CDS 4487188 4487652 . - 0 ID=cds3910;Parent=gene4046;Dbxref=Genbank:WP_012105895.1;Name=WP_012105895.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105895.1;transl_table=11 NC_009708.1 RefSeq gene 4487961 4488335 . - . ID=gene4047;Name=YPSIP31758_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21440 NC_009708.1 Protein Homology CDS 4487961 4488335 . - 0 ID=cds3911;Parent=gene4047;Dbxref=Genbank:WP_038400759.1;Name=WP_038400759.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400759.1;transl_table=11 NC_009708.1 RefSeq gene 4488734 4490248 . + . ID=gene4048;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21445;old_locus_tag=YpsIP31758_4000 NC_009708.1 Protein Homology CDS 4488734 4490248 . + 0 ID=cds3912;Parent=gene4048;Dbxref=Genbank:WP_002220236.1;Name=WP_002220236.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002220236.1;transl_table=11 NC_009708.1 RefSeq gene 4490410 4492857 . - . ID=gene4049;Name=YPSIP31758_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21450;old_locus_tag=YpsIP31758_4002 NC_009708.1 Protein Homology CDS 4490410 4492857 . - 0 ID=cds3913;Parent=gene4049;Dbxref=Genbank:WP_012105897.1;Name=WP_012105897.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_012105897.1;transl_table=11 NC_009708.1 RefSeq gene 4493027 4494457 . - . ID=gene4050;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21455;old_locus_tag=YpsIP31758_4003 NC_009708.1 Protein Homology CDS 4493027 4494457 . - 0 ID=cds3914;Parent=gene4050;Dbxref=Genbank:WP_012105898.1;Name=WP_012105898.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_012105898.1;transl_table=11 NC_009708.1 RefSeq gene 4494668 4495954 . - . ID=gene4051;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21460;old_locus_tag=YpsIP31758_4004 NC_009708.1 Protein Homology CDS 4494668 4495954 . - 0 ID=cds3915;Parent=gene4051;Dbxref=Genbank:WP_012105899.1;Name=WP_012105899.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_012105899.1;transl_table=11 NC_009708.1 RefSeq gene 4495964 4497952 . - . ID=gene4052;Name=YPSIP31758_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21465;old_locus_tag=YpsIP31758_4005 NC_009708.1 Protein Homology CDS 4495964 4497952 . - 0 ID=cds3916;Parent=gene4052;Dbxref=Genbank:WP_012105900.1;Name=WP_012105900.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_012105900.1;transl_table=11 NC_009708.1 RefSeq gene 4497954 4500137 . - . ID=gene4053;Name=YPSIP31758_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21470;old_locus_tag=YpsIP31758_4006 NC_009708.1 Protein Homology CDS 4497954 4500137 . - 0 ID=cds3917;Parent=gene4053;Dbxref=Genbank:WP_012105901.1;Name=WP_012105901.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=WP_012105901.1;transl_table=11 NC_009708.1 RefSeq gene 4500644 4502341 . + . ID=gene4054;Name=YPSIP31758_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21475;old_locus_tag=YpsIP31758_4007 NC_009708.1 Protein Homology CDS 4500644 4502341 . + 0 ID=cds3918;Parent=gene4054;Dbxref=Genbank:WP_012105902.1;Name=WP_012105902.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_012105902.1;transl_table=11 NC_009708.1 RefSeq gene 4502514 4517615 . - . ID=gene4055;Name=YPSIP31758_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21480;old_locus_tag=YpsIP31758_4008 NC_009708.1 Protein Homology CDS 4502514 4517615 . - 0 ID=cds3919;Parent=gene4055;Dbxref=Genbank:WP_041175806.1;Name=WP_041175806.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_041175806.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4507021 4507529 . + . ID=id354;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4507618 4511110 . + . ID=id355;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4511300 4511960 . + . ID=id356;gbkey=repeat_region NC_009708.1 RefSeq repeat_region 4512167 4514786 . + . ID=id357;gbkey=repeat_region NC_009708.1 RefSeq gene 4519354 4519641 . - . ID=gene4056;Name=YPSIP31758_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21485;old_locus_tag=YpsIP31758_4010 NC_009708.1 Protein Homology CDS 4519354 4519641 . - 0 ID=cds3920;Parent=gene4056;Dbxref=Genbank:WP_012105904.1;Name=WP_012105904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105904.1;transl_table=11 NC_009708.1 RefSeq gene 4519648 4519947 . - . ID=gene4057;Name=YPSIP31758_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21490;old_locus_tag=YpsIP31758_4011 NC_009708.1 Protein Homology CDS 4519648 4519947 . - 0 ID=cds3921;Parent=gene4057;Dbxref=Genbank:WP_025381824.1;Name=WP_025381824.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025381824.1;transl_table=11 NC_009708.1 RefSeq gene 4519967 4520791 . - . ID=gene4058;Name=YPSIP31758_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21495;old_locus_tag=YpsIP31758_4012 NC_009708.1 Protein Homology CDS 4519967 4520791 . - 0 ID=cds3922;Parent=gene4058;Dbxref=Genbank:WP_012105906.1;Name=WP_012105906.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105906.1;transl_table=11 NC_009708.1 RefSeq gene 4521208 4522311 . - . ID=gene4059;Name=YPSIP31758_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21500;old_locus_tag=YpsIP31758_4013 NC_009708.1 Protein Homology CDS 4521208 4522311 . - 0 ID=cds3923;Parent=gene4059;Dbxref=Genbank:WP_002209507.1;Name=WP_002209507.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NC_009708.1 RefSeq gene 4522670 4523263 . + . ID=gene4060;Name=YPSIP31758_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21505;old_locus_tag=YpsIP31758_4015 NC_009708.1 Protein Homology CDS 4522670 4523263 . + 0 ID=cds3924;Parent=gene4060;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11 NC_009708.1 RefSeq gene 4523448 4523837 . - . ID=gene4061;Name=YPSIP31758_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21510;old_locus_tag=YpsIP31758_4016 NC_009708.1 Protein Homology CDS 4523448 4523837 . - 0 ID=cds3925;Parent=gene4061;Dbxref=Genbank:WP_011193255.1;Name=WP_011193255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193255.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4523660 4523964 . + . ID=id358;gbkey=repeat_region NC_009708.1 RefSeq gene 4523943 4524335 . - . ID=gene4062;Name=YPSIP31758_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21515;old_locus_tag=YpsIP31758_4017 NC_009708.1 Protein Homology CDS 4523943 4524335 . - 0 ID=cds3926;Parent=gene4062;Dbxref=Genbank:WP_011193256.1;Name=WP_011193256.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193256.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4524078 4524463 . + . ID=id359;gbkey=repeat_region NC_009708.1 RefSeq gene 4524442 4524831 . - . ID=gene4063;Name=YPSIP31758_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21520;old_locus_tag=YpsIP31758_4018 NC_009708.1 Protein Homology CDS 4524442 4524831 . - 0 ID=cds3927;Parent=gene4063;Dbxref=Genbank:WP_011193257.1;Name=WP_011193257.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193257.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4524574 4524896 . + . ID=id360;gbkey=repeat_region NC_009708.1 RefSeq gene 4525848 4526078 . - . ID=gene4064;Name=YPSIP31758_RS21535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS21535;partial=true;pseudo=true;start_range=.,4525848 NC_009708.1 Protein Homology CDS 4525848 4526078 . - 0 ID=cds3928;Parent=gene4064;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,4525848;transl_table=11 NC_009708.1 RefSeq gene 4526418 4526921 . - . ID=gene4065;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21540;old_locus_tag=YpsIP31758_4020 NC_009708.1 Protein Homology CDS 4526418 4526921 . - 0 ID=cds3929;Parent=gene4065;Dbxref=Genbank:WP_012105909.1;Name=WP_012105909.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_012105909.1;transl_table=11 NC_009708.1 RefSeq gene 4527138 4528454 . + . ID=gene4066;Name=YPSIP31758_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21545;old_locus_tag=YpsIP31758_4021 NC_009708.1 Protein Homology CDS 4527138 4528454 . + 0 ID=cds3930;Parent=gene4066;Dbxref=Genbank:WP_012105910.1;Name=WP_012105910.1;gbkey=CDS;product=idonate transporter;protein_id=WP_012105910.1;transl_table=11 NC_009708.1 RefSeq gene 4528516 4529511 . - . ID=gene4067;Name=YPSIP31758_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21550;old_locus_tag=YpsIP31758_4022 NC_009708.1 Protein Homology CDS 4528516 4529511 . - 0 ID=cds3931;Parent=gene4067;Dbxref=Genbank:WP_012105911.1;Name=WP_012105911.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105911.1;transl_table=11 NC_009708.1 RefSeq gene 4529640 4530335 . - . ID=gene4068;Name=YPSIP31758_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21555;old_locus_tag=YpsIP31758_4023 NC_009708.1 Protein Homology CDS 4529640 4530335 . - 0 ID=cds3932;Parent=gene4068;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11 NC_009708.1 RefSeq gene 4530557 4530660 . - . ID=gene4069;Name=YPSIP31758_RS22515;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=YPSIP31758_RS22515 NC_009708.1 RefSeq transcript 4530557 4530660 . - . ID=rna128;Parent=gene4069;gbkey=misc_RNA;product=RyhB RNA NC_009708.1 RefSeq exon 4530557 4530660 . - . ID=id361;Parent=rna128;gbkey=misc_RNA;product=RyhB RNA NC_009708.1 RefSeq gene 4530831 4531100 . + . ID=gene4070;Name=YPSIP31758_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21560 NC_009708.1 Protein Homology CDS 4530831 4531100 . + 0 ID=cds3933;Parent=gene4070;Dbxref=Genbank:WP_002215491.1;Name=WP_002215491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215491.1;transl_table=11 NC_009708.1 RefSeq gene 4531100 4531837 . + . ID=gene4071;Name=YPSIP31758_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21565;old_locus_tag=YpsIP31758_4024 NC_009708.1 Protein Homology CDS 4531100 4531837 . + 0 ID=cds3934;Parent=gene4071;Dbxref=Genbank:WP_002209516.1;Name=WP_002209516.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209516.1;transl_table=11 NC_009708.1 RefSeq gene 4531912 4532919 . - . ID=gene4072;Name=YPSIP31758_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21570;old_locus_tag=YpsIP31758_4025 NC_009708.1 Protein Homology CDS 4531912 4532919 . - 0 ID=cds3935;Parent=gene4072;Dbxref=Genbank:WP_012105912.1;Name=WP_012105912.1;gbkey=CDS;product=sugar kinase;protein_id=WP_012105912.1;transl_table=11 NC_009708.1 RefSeq gene 4532929 4533789 . - . ID=gene4073;Name=YPSIP31758_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21575;old_locus_tag=YpsIP31758_4026 NC_009708.1 Protein Homology CDS 4532929 4533789 . - 0 ID=cds3936;Parent=gene4073;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11 NC_009708.1 RefSeq gene 4533815 4534498 . - . ID=gene4074;Name=YPSIP31758_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21580;old_locus_tag=YpsIP31758_4027 NC_009708.1 Protein Homology CDS 4533815 4534498 . - 0 ID=cds3937;Parent=gene4074;Dbxref=Genbank:WP_012105913.1;Name=WP_012105913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105913.1;transl_table=11 NC_009708.1 RefSeq gene 4534573 4535517 . - . ID=gene4075;Name=YPSIP31758_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21585;old_locus_tag=YpsIP31758_4028 NC_009708.1 Protein Homology CDS 4534573 4535517 . - 0 ID=cds3938;Parent=gene4075;Dbxref=Genbank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NC_009708.1 RefSeq gene 4535548 4536540 . - . ID=gene4076;Name=YPSIP31758_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21590;old_locus_tag=YpsIP31758_4029 NC_009708.1 Protein Homology CDS 4535548 4536540 . - 0 ID=cds3939;Parent=gene4076;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11 NC_009708.1 RefSeq gene 4536533 4538056 . - . ID=gene4077;Name=YPSIP31758_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21595;old_locus_tag=YpsIP31758_4030 NC_009708.1 Protein Homology CDS 4536533 4538056 . - 0 ID=cds3940;Parent=gene4077;Dbxref=Genbank:WP_012105914.1;Name=WP_012105914.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=D-ribose transporter ATP-binding protein;protein_id=WP_012105914.1;transl_table=11 NC_009708.1 RefSeq gene 4538245 4540800 . + . ID=gene4078;Name=YPSIP31758_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21600;old_locus_tag=YpsIP31758_4031 NC_009708.1 Protein Homology CDS 4538245 4540800 . + 0 ID=cds3941;Parent=gene4078;Dbxref=Genbank:WP_012105915.1;Name=WP_012105915.1;gbkey=CDS;product=histidine kinase;protein_id=WP_012105915.1;transl_table=11 NC_009708.1 RefSeq gene 4540936 4542132 . - . ID=gene4079;Name=YPSIP31758_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21605;old_locus_tag=YpsIP31758_4032 NC_009708.1 Protein Homology CDS 4540936 4542132 . - 0 ID=cds3942;Parent=gene4079;Dbxref=Genbank:WP_011193266.1;Name=WP_011193266.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193266.1;transl_table=11 NC_009708.1 RefSeq gene 4542443 4543939 . + . ID=gene4080;Name=YPSIP31758_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21610;old_locus_tag=YpsIP31758_4033 NC_009708.1 Protein Homology CDS 4542443 4543939 . + 0 ID=cds3943;Parent=gene4080;Dbxref=Genbank:WP_011193267.1;Name=WP_011193267.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_011193267.1;transl_table=11 NC_009708.1 RefSeq gene 4544086 4544421 . - . ID=gene4081;Name=YPSIP31758_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21615;old_locus_tag=YpsIP31758_4034 NC_009708.1 Protein Homology CDS 4544086 4544421 . - 0 ID=cds3944;Parent=gene4081;Dbxref=Genbank:WP_002209527.1;Name=WP_002209527.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002209527.1;transl_table=11 NC_009708.1 RefSeq gene 4545129 4545575 . + . ID=gene4082;Name=YPSIP31758_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21620;old_locus_tag=YpsIP31758_4035 NC_009708.1 Protein Homology CDS 4545129 4545575 . + 0 ID=cds3945;Parent=gene4082;Dbxref=Genbank:WP_002209528.1;Name=WP_002209528.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_002209528.1;transl_table=11 NC_009708.1 RefSeq gene 4545822 4547165 . + . ID=gene4083;Name=YPSIP31758_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21625;old_locus_tag=YpsIP31758_4036 NC_009708.1 Protein Homology CDS 4545822 4547165 . + 0 ID=cds3946;Parent=gene4083;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NC_009708.1 RefSeq gene 4547409 4548743 . + . ID=gene4084;Name=YPSIP31758_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21630;old_locus_tag=YpsIP31758_4037 NC_009708.1 Protein Homology CDS 4547409 4548743 . + 0 ID=cds3947;Parent=gene4084;Dbxref=Genbank:WP_041175807.1;Name=WP_041175807.1;gbkey=CDS;product=peptidase M10;protein_id=WP_041175807.1;transl_table=11 NC_009708.1 RefSeq gene 4548808 4549578 . - . ID=gene4085;Name=YPSIP31758_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21635;old_locus_tag=YpsIP31758_4038 NC_009708.1 Protein Homology CDS 4548808 4549578 . - 0 ID=cds3948;Parent=gene4085;Dbxref=Genbank:WP_002215483.1;Name=WP_002215483.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_002215483.1;transl_table=11 NC_009708.1 RefSeq gene 4549792 4550712 . - . ID=gene4086;Name=YPSIP31758_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21640 NC_009708.1 Protein Homology CDS 4549792 4550712 . - 0 ID=cds3949;Parent=gene4086;Dbxref=Genbank:WP_033851552.1;Name=WP_033851552.1;gbkey=CDS;product=endonuclease;protein_id=WP_033851552.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4550161 4550311 . + . ID=id362;gbkey=repeat_region NC_009708.1 RefSeq gene 4551894 4552370 . - . ID=gene4087;Name=YPSIP31758_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21645;old_locus_tag=YpsIP31758_4042 NC_009708.1 Protein Homology CDS 4551894 4552370 . - 0 ID=cds3950;Parent=gene4087;Dbxref=Genbank:WP_012105919.1;Name=WP_012105919.1;gbkey=CDS;product=entero membrane protein;protein_id=WP_012105919.1;transl_table=11 NC_009708.1 RefSeq gene 4552372 4553220 . - . ID=gene4088;Name=YPSIP31758_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21650;old_locus_tag=YpsIP31758_4043 NC_009708.1 Protein Homology CDS 4552372 4553220 . - 0 ID=cds3951;Parent=gene4088;Dbxref=Genbank:WP_012105920.1;Name=WP_012105920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105920.1;transl_table=11 NC_009708.1 RefSeq gene 4553463 4553759 . - . ID=gene4089;Name=YPSIP31758_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21655;old_locus_tag=YpsIP31758_4044 NC_009708.1 Protein Homology CDS 4553463 4553759 . - 0 ID=cds3952;Parent=gene4089;Dbxref=Genbank:WP_041175808.1;Name=WP_041175808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175808.1;transl_table=11 NC_009708.1 RefSeq gene 4553746 4554020 . - . ID=gene4090;Name=YPSIP31758_RS21660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS21660;pseudo=true NC_009708.1 Protein Homology CDS 4553746 4554020 . - 0 ID=cds3953;Parent=gene4090;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 4554086 4554550 . - . ID=gene4091;Name=YPSIP31758_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22615;old_locus_tag=YpsIP31758_4046 NC_009708.1 Protein Homology CDS 4554086 4554550 . - 0 ID=cds3954;Parent=gene4091;Dbxref=Genbank:WP_049756390.1;Name=WP_049756390.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756390.1;transl_table=11 NC_009708.1 RefSeq gene 4555074 4557122 . - . ID=gene4092;Name=YPSIP31758_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21670;old_locus_tag=YpsIP31758_4047 NC_009708.1 Protein Homology CDS 4555074 4557122 . - 0 ID=cds3955;Parent=gene4092;Dbxref=Genbank:WP_012105923.1;Name=WP_012105923.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_012105923.1;transl_table=11 NC_009708.1 RefSeq gene 4557451 4558293 . + . ID=gene4093;Name=YPSIP31758_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21675;old_locus_tag=YpsIP31758_4048 NC_009708.1 Protein Homology CDS 4557451 4558293 . + 0 ID=cds3956;Parent=gene4093;Dbxref=Genbank:WP_011193270.1;Name=WP_011193270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193270.1;transl_table=11 NC_009708.1 RefSeq gene 4558461 4559813 . + . ID=gene4094;Name=YPSIP31758_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21680;old_locus_tag=YpsIP31758_4049 NC_009708.1 Protein Homology CDS 4558461 4559813 . + 0 ID=cds3957;Parent=gene4094;Dbxref=Genbank:WP_012105924.1;Name=WP_012105924.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_012105924.1;transl_table=11 NC_009708.1 RefSeq gene 4560084 4561211 . + . ID=gene4095;Name=YPSIP31758_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21685;old_locus_tag=YpsIP31758_4050 NC_009708.1 Protein Homology CDS 4560084 4561211 . + 0 ID=cds3958;Parent=gene4095;Dbxref=Genbank:WP_012105925.1;Name=WP_012105925.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_012105925.1;transl_table=11 NC_009708.1 RefSeq gene 4561389 4562657 . + . ID=gene4096;Name=YPSIP31758_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21690;old_locus_tag=YpsIP31758_4051 NC_009708.1 Protein Homology CDS 4561389 4562657 . + 0 ID=cds3959;Parent=gene4096;Dbxref=Genbank:WP_012105926.1;Name=WP_012105926.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_012105926.1;transl_table=11 NC_009708.1 RefSeq gene 4562668 4563804 . + . ID=gene4097;Name=YPSIP31758_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21695;old_locus_tag=YpsIP31758_4052 NC_009708.1 Protein Homology CDS 4562668 4563804 . + 0 ID=cds3960;Parent=gene4097;Dbxref=Genbank:WP_012105927.1;Name=WP_012105927.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_012105927.1;transl_table=11 NC_009708.1 RefSeq gene 4564050 4564547 . - . ID=gene4098;Name=YPSIP31758_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21700;old_locus_tag=YpsIP31758_4053 NC_009708.1 Protein Homology CDS 4564050 4564547 . - 0 ID=cds3961;Parent=gene4098;Dbxref=Genbank:WP_012105929.1;Name=WP_012105929.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105929.1;transl_table=11 NC_009708.1 RefSeq gene 4564549 4565328 . - . ID=gene4099;Name=YPSIP31758_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21705;old_locus_tag=YpsIP31758_4054 NC_009708.1 Protein Homology CDS 4564549 4565328 . - 0 ID=cds3962;Parent=gene4099;Dbxref=Genbank:WP_041175903.1;Name=WP_041175903.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175903.1;transl_table=11 NC_009708.1 RefSeq gene 4565506 4568709 . - . ID=gene4100;Name=YPSIP31758_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21710;old_locus_tag=YpsIP31758_4055 NC_009708.1 Protein Homology CDS 4565506 4568709 . - 0 ID=cds3963;Parent=gene4100;Dbxref=Genbank:WP_012105931.1;Name=WP_012105931.1;gbkey=CDS;product=autotransporter;protein_id=WP_012105931.1;transl_table=11 NC_009708.1 RefSeq gene 4569317 4570402 . + . ID=gene4101;Name=YPSIP31758_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21715;old_locus_tag=YpsIP31758_4056 NC_009708.1 Protein Homology CDS 4569317 4570402 . + 0 ID=cds3964;Parent=gene4101;Dbxref=Genbank:WP_012105932.1;Name=WP_012105932.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105932.1;transl_table=11 NC_009708.1 RefSeq gene 4570406 4571203 . + . ID=gene4102;Name=YPSIP31758_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21720;old_locus_tag=YpsIP31758_4057 NC_009708.1 Protein Homology CDS 4570406 4571203 . + 0 ID=cds3965;Parent=gene4102;Dbxref=Genbank:WP_012105933.1;Name=WP_012105933.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_012105933.1;transl_table=11 NC_009708.1 RefSeq gene 4571208 4573445 . - . ID=gene4103;Name=YPSIP31758_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21725;old_locus_tag=YpsIP31758_4058 NC_009708.1 Protein Homology CDS 4571208 4573445 . - 0 ID=cds3966;Parent=gene4103;Dbxref=Genbank:WP_012105934.1;Name=WP_012105934.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105934.1;transl_table=11 NC_009708.1 RefSeq gene 4573750 4574577 . - . ID=gene4104;Name=YPSIP31758_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21730;old_locus_tag=YpsIP31758_4059 NC_009708.1 Protein Homology CDS 4573750 4574577 . - 0 ID=cds3967;Parent=gene4104;Dbxref=Genbank:WP_012105935.1;Name=WP_012105935.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=WP_012105935.1;transl_table=11 NC_009708.1 RefSeq gene 4574795 4574995 . + . ID=gene4105;Name=YPSIP31758_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21735;old_locus_tag=YpsIP31758_4060 NC_009708.1 Protein Homology CDS 4574795 4574995 . + 0 ID=cds3968;Parent=gene4105;Dbxref=Genbank:WP_012105936.1;Name=WP_012105936.1;gbkey=CDS;product=tautomerase;protein_id=WP_012105936.1;transl_table=11 NC_009708.1 RefSeq gene 4575274 4576218 . + . ID=gene4106;Name=YPSIP31758_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21740;old_locus_tag=YpsIP31758_4062 NC_009708.1 Protein Homology CDS 4575274 4576218 . + 0 ID=cds3969;Parent=gene4106;Dbxref=Genbank:WP_002209549.1;Name=WP_002209549.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NC_009708.1 RefSeq gene 4576382 4577881 . - . ID=gene4107;Name=YPSIP31758_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21745;old_locus_tag=YpsIP31758_4063 NC_009708.1 Protein Homology CDS 4576382 4577881 . - 0 ID=cds3970;Parent=gene4107;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11 NC_009708.1 RefSeq gene 4578246 4579535 . - . ID=gene4108;Name=YPSIP31758_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21750;old_locus_tag=YpsIP31758_4064 NC_009708.1 Protein Homology CDS 4578246 4579535 . - 0 ID=cds3971;Parent=gene4108;Dbxref=Genbank:WP_012105938.1;Name=WP_012105938.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_012105938.1;transl_table=11 NC_009708.1 RefSeq gene 4580007 4580486 . - . ID=gene4109;Name=YPSIP31758_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21755;old_locus_tag=YpsIP31758_4065 NC_009708.1 Protein Homology CDS 4580007 4580486 . - 0 ID=cds3972;Parent=gene4109;Dbxref=Genbank:WP_012105939.1;Name=WP_012105939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105939.1;transl_table=11 NC_009708.1 RefSeq gene 4580611 4582329 . - . ID=gene4110;Name=YPSIP31758_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21760;old_locus_tag=YpsIP31758_4066 NC_009708.1 Protein Homology CDS 4580611 4582329 . - 0 ID=cds3973;Parent=gene4110;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NC_009708.1 RefSeq gene 4582575 4583279 . - . ID=gene4111;Name=YPSIP31758_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21765;old_locus_tag=YpsIP31758_4068 NC_009708.1 Protein Homology CDS 4582575 4583279 . - 0 ID=cds3974;Parent=gene4111;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11 NC_009708.1 RefSeq gene 4583920 4585902 . - . ID=gene4112;Name=YPSIP31758_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21770;old_locus_tag=YpsIP31758_4069 NC_009708.1 Protein Homology CDS 4583920 4585902 . - 0 ID=cds3975;Parent=gene4112;Dbxref=Genbank:WP_002214767.1;Name=WP_002214767.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_002214767.1;transl_table=11 NC_009708.1 RefSeq gene 4586251 4587366 . - . ID=gene4113;Name=YPSIP31758_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21775;old_locus_tag=YpsIP31758_4070 NC_009708.1 Protein Homology CDS 4586251 4587366 . - 0 ID=cds3976;Parent=gene4113;Dbxref=Genbank:WP_011193286.1;Name=WP_011193286.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endonuclease III;protein_id=WP_011193286.1;transl_table=11 NC_009708.1 RefSeq gene 4587484 4588491 . - . ID=gene4114;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21780;old_locus_tag=YpsIP31758_4071 NC_009708.1 Protein Homology CDS 4587484 4588491 . - 0 ID=cds3977;Parent=gene4114;Dbxref=Genbank:WP_041175904.1;Name=WP_041175904.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_041175904.1;transl_table=11 NC_009708.1 RefSeq gene 4588557 4589537 . - . ID=gene4115;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21785;old_locus_tag=YpsIP31758_4072 NC_009708.1 Protein Homology CDS 4588557 4589537 . - 0 ID=cds3978;Parent=gene4115;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NC_009708.1 RefSeq gene 4589551 4590453 . - . ID=gene4116;Name=YPSIP31758_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21790;old_locus_tag=YpsIP31758_4073 NC_009708.1 Protein Homology CDS 4589551 4590453 . - 0 ID=cds3979;Parent=gene4116;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11 NC_009708.1 RefSeq gene 4590464 4591483 . - . ID=gene4117;Name=YPSIP31758_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21795;old_locus_tag=YpsIP31758_4074 NC_009708.1 Protein Homology CDS 4590464 4591483 . - 0 ID=cds3980;Parent=gene4117;Dbxref=Genbank:WP_002228714.1;Name=WP_002228714.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002228714.1;transl_table=11 NC_009708.1 RefSeq gene 4591766 4593373 . - . ID=gene4118;Name=YPSIP31758_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21800;old_locus_tag=YpsIP31758_4075 NC_009708.1 Protein Homology CDS 4591766 4593373 . - 0 ID=cds3981;Parent=gene4118;Dbxref=Genbank:WP_002209564.1;Name=WP_002209564.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002209564.1;transl_table=11 NC_009708.1 RefSeq gene 4593776 4593982 . - . ID=gene4119;Name=YPSIP31758_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21805 NC_009708.1 Protein Homology CDS 4593776 4593982 . - 0 ID=cds3982;Parent=gene4119;Dbxref=Genbank:WP_041175809.1;Name=WP_041175809.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175809.1;transl_table=11 NC_009708.1 RefSeq gene 4594042 4595712 . - . ID=gene4120;Name=YPSIP31758_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21810;old_locus_tag=YpsIP31758_4076 NC_009708.1 Protein Homology CDS 4594042 4595712 . - 0 ID=cds3983;Parent=gene4120;Dbxref=Genbank:WP_012105942.1;Name=WP_012105942.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_012105942.1;transl_table=11 NC_009708.1 RefSeq gene 4595913 4597304 . - . ID=gene4121;Name=YPSIP31758_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21815;old_locus_tag=YpsIP31758_4077 NC_009708.1 Protein Homology CDS 4595913 4597304 . - 0 ID=cds3984;Parent=gene4121;Dbxref=Genbank:WP_012105943.1;Name=WP_012105943.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_012105943.1;transl_table=11 NC_009708.1 RefSeq gene 4597617 4597693 . - . ID=gene4122;Name=YPSIP31758_RS21820;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPSIP31758_RS21820;old_locus_tag=YpsIP31758_4295 NC_009708.1 tRNAscan-SE tRNA 4597617 4597693 . - . ID=rna129;Parent=gene4122;anticodon=(pos:complement(4597657..4597659));gbkey=tRNA;product=tRNA-Pro NC_009708.1 tRNAscan-SE exon 4597617 4597693 . - . ID=id363;Parent=rna129;anticodon=(pos:complement(4597657..4597659));gbkey=tRNA;product=tRNA-Pro NC_009708.1 RefSeq gene 4597810 4599141 . - . ID=gene4123;Name=YPSIP31758_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21825;old_locus_tag=YpsIP31758_4078 NC_009708.1 Protein Homology CDS 4597810 4599141 . - 0 ID=cds3985;Parent=gene4123;Dbxref=Genbank:WP_012105944.1;Name=WP_012105944.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105944.1;transl_table=11 NC_009708.1 RefSeq gene 4599236 4600765 . - . ID=gene4124;Name=YPSIP31758_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21830;old_locus_tag=YpsIP31758_4079 NC_009708.1 Protein Homology CDS 4599236 4600765 . - 0 ID=cds3986;Parent=gene4124;Dbxref=Genbank:WP_012105945.1;Name=WP_012105945.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_012105945.1;transl_table=11 NC_009708.1 RefSeq gene 4600762 4601352 . - . ID=gene4125;Name=YPSIP31758_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21835;old_locus_tag=YpsIP31758_4080 NC_009708.1 Protein Homology CDS 4600762 4601352 . - 0 ID=cds3987;Parent=gene4125;Dbxref=Genbank:WP_002209570.1;Name=WP_002209570.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209570.1;transl_table=11 NC_009708.1 RefSeq gene 4601468 4603159 . - . ID=gene4126;Name=YPSIP31758_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21840;old_locus_tag=YpsIP31758_4081 NC_009708.1 Protein Homology CDS 4601468 4603159 . - 0 ID=cds3988;Parent=gene4126;Dbxref=Genbank:WP_011193291.1;Name=WP_011193291.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=WP_011193291.1;transl_table=11 NC_009708.1 RefSeq gene 4603688 4605151 . - . ID=gene4127;Name=YPSIP31758_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21845;old_locus_tag=YpsIP31758_4082 NC_009708.1 Protein Homology CDS 4603688 4605151 . - 0 ID=cds3989;Parent=gene4127;Dbxref=Genbank:WP_002209573.1;Name=WP_002209573.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209573.1;transl_table=11 NC_009708.1 RefSeq gene 4605619 4607022 . - . ID=gene4128;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21850;old_locus_tag=YpsIP31758_4084 NC_009708.1 Protein Homology CDS 4605619 4607022 . - 0 ID=cds3990;Parent=gene4128;Dbxref=Genbank:WP_002214368.1;Name=WP_002214368.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002214368.1;transl_table=11 NC_009708.1 RefSeq gene 4607354 4608886 . - . ID=gene4129;Name=YPSIP31758_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21855;old_locus_tag=YpsIP31758_4085 NC_009708.1 Protein Homology CDS 4607354 4608886 . - 0 ID=cds3991;Parent=gene4129;Dbxref=Genbank:WP_012105946.1;Name=WP_012105946.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=WP_012105946.1;transl_table=11 NC_009708.1 RefSeq gene 4608883 4610574 . - . ID=gene4130;Name=YPSIP31758_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21860;old_locus_tag=YpsIP31758_4086 NC_009708.1 Protein Homology CDS 4608883 4610574 . - 0 ID=cds3992;Parent=gene4130;Dbxref=Genbank:WP_002209576.1;Name=WP_002209576.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11 NC_009708.1 RefSeq gene 4611301 4612245 . + . ID=gene4131;Name=YPSIP31758_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21865;old_locus_tag=YpsIP31758_4087 NC_009708.1 Protein Homology CDS 4611301 4612245 . + 0 ID=cds3993;Parent=gene4131;Dbxref=Genbank:WP_002209577.1;Name=WP_002209577.1;gbkey=CDS;product=pyridoxal-5'-phosphate-dependent protein;protein_id=WP_002209577.1;transl_table=11 NC_009708.1 RefSeq gene 4612242 4612808 . + . ID=gene4132;Name=YPSIP31758_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21870;old_locus_tag=YpsIP31758_4088 NC_009708.1 Protein Homology CDS 4612242 4612808 . + 0 ID=cds3994;Parent=gene4132;Dbxref=Genbank:WP_012105947.1;Name=WP_012105947.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_012105947.1;transl_table=11 NC_009708.1 RefSeq gene 4612891 4613820 . + . ID=gene4133;Name=YPSIP31758_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21875;old_locus_tag=YpsIP31758_4089 NC_009708.1 Protein Homology CDS 4612891 4613820 . + 0 ID=cds3995;Parent=gene4133;Dbxref=Genbank:WP_002209579.1;Name=WP_002209579.1;gbkey=CDS;product=transporter;protein_id=WP_002209579.1;transl_table=11 NC_009708.1 RefSeq gene 4613822 4615066 . + . ID=gene4134;Name=YPSIP31758_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21880;old_locus_tag=YpsIP31758_4090 NC_009708.1 Protein Homology CDS 4613822 4615066 . + 0 ID=cds3996;Parent=gene4134;Dbxref=Genbank:WP_012105948.1;Name=WP_012105948.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105948.1;transl_table=11 NC_009708.1 RefSeq gene 4615589 4616542 . + . ID=gene4135;Name=YPSIP31758_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21885;old_locus_tag=YpsIP31758_4091 NC_009708.1 Protein Homology CDS 4615589 4616542 . + 0 ID=cds3997;Parent=gene4135;Dbxref=Genbank:WP_002209581.1;Name=WP_002209581.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NC_009708.1 RefSeq gene 4616552 4617511 . + . ID=gene4136;Name=YPSIP31758_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21890;old_locus_tag=YpsIP31758_4092 NC_009708.1 Protein Homology CDS 4616552 4617511 . + 0 ID=cds3998;Parent=gene4136;Dbxref=Genbank:WP_002209582.1;Name=WP_002209582.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002209582.1;transl_table=11 NC_009708.1 RefSeq gene 4617501 4618508 . + . ID=gene4137;Name=YPSIP31758_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21895;old_locus_tag=YpsIP31758_4093 NC_009708.1 Protein Homology CDS 4617501 4618508 . + 0 ID=cds3999;Parent=gene4137;Dbxref=Genbank:WP_012105949.1;Name=WP_012105949.1;gbkey=CDS;product=enterobactin ABC transporter permease;protein_id=WP_012105949.1;transl_table=11 NC_009708.1 RefSeq gene 4618505 4619263 . + . ID=gene4138;Name=YPSIP31758_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21900;old_locus_tag=YpsIP31758_4095 NC_009708.1 Protein Homology CDS 4618505 4619263 . + 0 ID=cds4000;Parent=gene4138;Dbxref=Genbank:WP_012105950.1;Name=WP_012105950.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_012105950.1;transl_table=11 NC_009708.1 RefSeq gene 4619260 4619760 . - . ID=gene4139;Name=YPSIP31758_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22620 NC_009708.1 Protein Homology CDS 4619260 4619760 . - 0 ID=cds4001;Parent=gene4139;Dbxref=Genbank:WP_038400734.1;Name=WP_038400734.1;gbkey=CDS;product=toxin Fic;protein_id=WP_038400734.1;transl_table=11 NC_009708.1 RefSeq gene 4620075 4620455 . - . ID=gene4140;Name=YPSIP31758_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21910;old_locus_tag=YpsIP31758_4096 NC_009708.1 Protein Homology CDS 4620075 4620455 . - 0 ID=cds4002;Parent=gene4140;Dbxref=Genbank:WP_012105952.1;Name=WP_012105952.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105952.1;transl_table=11 NC_009708.1 RefSeq gene 4621348 4622541 . - . ID=gene4141;Name=YPSIP31758_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21915;old_locus_tag=YpsIP31758_4098 NC_009708.1 Protein Homology CDS 4621348 4622541 . - 0 ID=cds4003;Parent=gene4141;Dbxref=Genbank:WP_002209588.1;Name=WP_002209588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209588.1;transl_table=11 NC_009708.1 RefSeq gene 4622631 4623815 . - . ID=gene4142;Name=YPSIP31758_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21920;old_locus_tag=YpsIP31758_4099 NC_009708.1 Protein Homology CDS 4622631 4623815 . - 0 ID=cds4004;Parent=gene4142;Dbxref=Genbank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;product=xylose ABC transporter permease;protein_id=WP_002209589.1;transl_table=11 NC_009708.1 RefSeq gene 4623802 4625334 . - . ID=gene4143;Name=YPSIP31758_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21925;old_locus_tag=YpsIP31758_4100 NC_009708.1 Protein Homology CDS 4623802 4625334 . - 0 ID=cds4005;Parent=gene4143;Dbxref=Genbank:WP_012105953.1;Name=WP_012105953.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose ABC transporter ATP-binding protein;protein_id=WP_012105953.1;transl_table=11 NC_009708.1 RefSeq gene 4625542 4626537 . - . ID=gene4144;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21930;old_locus_tag=YpsIP31758_4101 NC_009708.1 Protein Homology CDS 4625542 4626537 . - 0 ID=cds4006;Parent=gene4144;Dbxref=Genbank:WP_002209591.1;Name=WP_002209591.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;product=xylose ABC transporter substrate-binding protein;protein_id=WP_002209591.1;transl_table=11 NC_009708.1 RefSeq gene 4627000 4628319 . + . ID=gene4145;Name=YPSIP31758_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21935;old_locus_tag=YpsIP31758_4102 NC_009708.1 Protein Homology CDS 4627000 4628319 . + 0 ID=cds4007;Parent=gene4145;Dbxref=Genbank:WP_002209593.1;Name=WP_002209593.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NC_009708.1 RefSeq gene 4628443 4629897 . + . ID=gene4146;Name=YPSIP31758_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21940;old_locus_tag=YpsIP31758_4103 NC_009708.1 Protein Homology CDS 4628443 4629897 . + 0 ID=cds4008;Parent=gene4146;Dbxref=Genbank:WP_012105954.1;Name=WP_012105954.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulokinase;protein_id=WP_012105954.1;transl_table=11 NC_009708.1 RefSeq gene 4629977 4630963 . - . ID=gene4147;Name=YPSIP31758_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21945;old_locus_tag=YpsIP31758_4104 NC_009708.1 Protein Homology CDS 4629977 4630963 . - 0 ID=cds4009;Parent=gene4147;Dbxref=Genbank:WP_012105955.1;Name=WP_012105955.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105955.1;transl_table=11 NC_009708.1 RefSeq gene 4631002 4631769 . - . ID=gene4148;Name=YPSIP31758_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21950;old_locus_tag=YpsIP31758_4105 NC_009708.1 Protein Homology CDS 4631002 4631769 . - 0 ID=cds4010;Parent=gene4148;Dbxref=Genbank:WP_011193322.1;Name=WP_011193322.1;gbkey=CDS;product=fimbrial chaperone protein StdC;protein_id=WP_011193322.1;transl_table=11 NC_009708.1 RefSeq gene 4631862 4634354 . - . ID=gene4149;Name=YPSIP31758_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21955;old_locus_tag=YpsIP31758_4106 NC_009708.1 Protein Homology CDS 4631862 4634354 . - 0 ID=cds4011;Parent=gene4149;Dbxref=Genbank:WP_012105957.1;Name=WP_012105957.1;gbkey=CDS;product=O-succinylbenzoate--CoA ligase;protein_id=WP_012105957.1;transl_table=11 NC_009708.1 RefSeq gene 4634430 4634987 . - . ID=gene4150;Name=YPSIP31758_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21960;old_locus_tag=YpsIP31758_4107 NC_009708.1 Protein Homology CDS 4634430 4634987 . - 0 ID=cds4012;Parent=gene4150;Dbxref=Genbank:WP_012105958.1;Name=WP_012105958.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_012105958.1;transl_table=11 NC_009708.1 RefSeq gene 4635855 4636847 . - . ID=gene4151;Name=YPSIP31758_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21965;old_locus_tag=YpsIP31758_4108 NC_009708.1 Protein Homology CDS 4635855 4636847 . - 0 ID=cds4013;Parent=gene4151;Dbxref=Genbank:WP_012105960.1;Name=WP_012105960.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=O-acetyltransferase;protein_id=WP_012105960.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4637071 4637691 . + . ID=id364;gbkey=repeat_region NC_009708.1 RefSeq gene 4637831 4639060 . + . ID=gene4152;Name=YPSIP31758_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21970;old_locus_tag=YpsIP31758_4110 NC_009708.1 Protein Homology CDS 4637831 4639060 . + 0 ID=cds4014;Parent=gene4152;Dbxref=Genbank:WP_012105961.1;Name=WP_012105961.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_012105961.1;transl_table=11 NC_009708.1 RefSeq gene 4639209 4639412 . - . ID=gene4153;Name=YPSIP31758_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21975 NC_009708.1 Protein Homology CDS 4639209 4639412 . - 0 ID=cds4015;Parent=gene4153;Dbxref=Genbank:WP_041175810.1;Name=WP_041175810.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175810.1;transl_table=11 NC_009708.1 RefSeq gene 4639533 4639688 . + . ID=gene4154;Name=YPSIP31758_RS22625;end_range=4639688,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS22625;partial=true;pseudo=true NC_009708.1 Protein Homology CDS 4639533 4639688 . + 0 ID=cds4016;Parent=gene4154;end_range=4639688,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009708.1 RefSeq gene 4639770 4640351 . + . ID=gene4155;Name=YPSIP31758_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21980;old_locus_tag=YpsIP31758_4111 NC_009708.1 Protein Homology CDS 4639770 4640351 . + 0 ID=cds4017;Parent=gene4155;Dbxref=Genbank:WP_025381914.1;Name=WP_025381914.1;gbkey=CDS;product=membrane protein;protein_id=WP_025381914.1;transl_table=11 NC_009708.1 RefSeq gene 4640365 4640697 . - . ID=gene4156;Name=YPSIP31758_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21985;old_locus_tag=YpsIP31758_4112 NC_009708.1 Protein Homology CDS 4640365 4640697 . - 0 ID=cds4018;Parent=gene4156;Dbxref=Genbank:WP_012105963.1;Name=WP_012105963.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105963.1;transl_table=11 NC_009708.1 RefSeq gene 4640986 4641450 . + . ID=gene4157;Name=YPSIP31758_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21990 NC_009708.1 Protein Homology CDS 4640986 4641450 . + 0 ID=cds4019;Parent=gene4157;Dbxref=Genbank:WP_041175811.1;Name=WP_041175811.1;gbkey=CDS;product=transposase;protein_id=WP_041175811.1;transl_table=11 NC_009708.1 RefSeq gene 4641457 4643430 . - . ID=gene4158;Name=YPSIP31758_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS21995;old_locus_tag=YpsIP31758_4114 NC_009708.1 Protein Homology CDS 4641457 4643430 . - 0 ID=cds4020;Parent=gene4158;Dbxref=Genbank:WP_012105964.1;Name=WP_012105964.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_012105964.1;transl_table=11 NC_009708.1 RefSeq gene 4643427 4644815 . - . ID=gene4159;Name=YPSIP31758_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22000;old_locus_tag=YpsIP31758_4115 NC_009708.1 Protein Homology CDS 4643427 4644815 . - 0 ID=cds4021;Parent=gene4159;Dbxref=Genbank:WP_011193344.1;Name=WP_011193344.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_011193344.1;transl_table=11 NC_009708.1 RefSeq gene 4645011 4645940 . - . ID=gene4160;Name=YPSIP31758_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22005;old_locus_tag=YpsIP31758_4116 NC_009708.1 Protein Homology CDS 4645011 4645940 . - 0 ID=cds4022;Parent=gene4160;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11 NC_009708.1 RefSeq gene 4645940 4646614 . - . ID=gene4161;Name=YPSIP31758_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22010;old_locus_tag=YpsIP31758_4117 NC_009708.1 Protein Homology CDS 4645940 4646614 . - 0 ID=cds4023;Parent=gene4161;Dbxref=Genbank:WP_011193343.1;Name=WP_011193343.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_011193343.1;transl_table=11 NC_009708.1 RefSeq gene 4646611 4647582 . - . ID=gene4162;Name=YPSIP31758_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22015;old_locus_tag=YpsIP31758_4118 NC_009708.1 Protein Homology CDS 4646611 4647582 . - 0 ID=cds4024;Parent=gene4162;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11 NC_009708.1 RefSeq gene 4647595 4650006 . - . ID=gene4163;Name=YPSIP31758_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22020 NC_009708.1 Protein Homology CDS 4647595 4650006 . - 0 ID=cds4025;Parent=gene4163;Dbxref=Genbank:WP_002231683.1;Name=WP_002231683.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_002231683.1;transl_table=11 NC_009708.1 RefSeq gene 4650055 4650642 . - . ID=gene4164;Name=YPSIP31758_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22025 NC_009708.1 Protein Homology CDS 4650055 4650642 . - 0 ID=cds4026;Parent=gene4164;Dbxref=Genbank:WP_002231685.1;Name=WP_002231685.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002231685.1;transl_table=11 NC_009708.1 RefSeq gene 4650839 4651663 . + . ID=gene4165;Name=YPSIP31758_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22030;old_locus_tag=YpsIP31758_4120 NC_009708.1 Protein Homology CDS 4650839 4651663 . + 0 ID=cds4027;Parent=gene4165;Dbxref=Genbank:WP_012105965.1;Name=WP_012105965.1;gbkey=CDS;product=protein FdhD;protein_id=WP_012105965.1;transl_table=11 NC_009708.1 RefSeq gene 4652098 4652721 . + . ID=gene4166;Name=YPSIP31758_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22035;old_locus_tag=YpsIP31758_4121 NC_009708.1 Protein Homology CDS 4652098 4652721 . + 0 ID=cds4028;Parent=gene4166;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11 NC_009708.1 RefSeq gene 4653065 4655014 . + . ID=gene4167;Name=YPSIP31758_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22040;old_locus_tag=YpsIP31758_4122 NC_009708.1 Protein Homology CDS 4653065 4655014 . + 0 ID=cds4029;Parent=gene4167;Dbxref=Genbank:WP_011193340.1;Name=WP_011193340.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_011193340.1;transl_table=11 NC_009708.1 RefSeq gene 4655152 4655535 . + . ID=gene4168;Name=YPSIP31758_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22045;old_locus_tag=YpsIP31758_4123 NC_009708.1 Protein Homology CDS 4655152 4655535 . + 0 ID=cds4030;Parent=gene4168;Dbxref=Genbank:WP_012105966.1;Name=WP_012105966.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105966.1;transl_table=11 NC_009708.1 RefSeq gene 4656067 4656543 . + . ID=gene4169;Name=YPSIP31758_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22050;old_locus_tag=YpsIP31758_4124 NC_009708.1 Protein Homology CDS 4656067 4656543 . + 0 ID=cds4031;Parent=gene4169;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11 NC_009708.1 RefSeq gene 4656712 4657068 . - . ID=gene4170;Name=YPSIP31758_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22055;old_locus_tag=YpsIP31758_4125 NC_009708.1 Protein Homology CDS 4656712 4657068 . - 0 ID=cds4032;Parent=gene4170;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11 NC_009708.1 RefSeq gene 4657317 4657871 . - . ID=gene4171;Name=YPSIP31758_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22060;old_locus_tag=YpsIP31758_4126 NC_009708.1 Protein Homology CDS 4657317 4657871 . - 0 ID=cds4033;Parent=gene4171;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11 NC_009708.1 RefSeq gene 4658078 4659241 . - . ID=gene4172;Name=YPSIP31758_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22065;old_locus_tag=YpsIP31758_4127 NC_009708.1 Protein Homology CDS 4658078 4659241 . - 0 ID=cds4034;Parent=gene4172;Dbxref=Genbank:WP_012105967.1;Name=WP_012105967.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_012105967.1;transl_table=11 NC_009708.1 RefSeq gene 4659378 4661309 . - . ID=gene4173;Name=YPSIP31758_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22070;old_locus_tag=YpsIP31758_4128 NC_009708.1 Protein Homology CDS 4659378 4661309 . - 0 ID=cds4035;Parent=gene4173;Dbxref=Genbank:WP_011193337.1;Name=WP_011193337.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannitol transporter subunit IIABC;protein_id=WP_011193337.1;transl_table=11 NC_009708.1 RefSeq gene 4661791 4662510 . - . ID=gene4174;Name=YPSIP31758_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22075;old_locus_tag=YpsIP31758_4129 NC_009708.1 Protein Homology CDS 4661791 4662510 . - 0 ID=cds4036;Parent=gene4174;Dbxref=Genbank:WP_012105968.1;Name=WP_012105968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105968.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4662762 4662934 . + . ID=id365;gbkey=repeat_region NC_009708.1 RefSeq gene 4662982 4665051 . - . ID=gene4175;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22080;old_locus_tag=YpsIP31758_4130 NC_009708.1 Protein Homology CDS 4662982 4665051 . - 0 ID=cds4037;Parent=gene4175;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NC_009708.1 RefSeq gene 4665061 4665975 . - . ID=gene4176;Name=YPSIP31758_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22085;old_locus_tag=YpsIP31758_4131 NC_009708.1 Protein Homology CDS 4665061 4665975 . - 0 ID=cds4038;Parent=gene4176;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NC_009708.1 RefSeq gene 4666304 4666876 . + . ID=gene4177;Name=YPSIP31758_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22090;old_locus_tag=YpsIP31758_4132 NC_009708.1 Protein Homology CDS 4666304 4666876 . + 0 ID=cds4039;Parent=gene4177;Dbxref=Genbank:WP_012105969.1;Name=WP_012105969.1;gbkey=CDS;product=3-methyladenine DNA glycosylase;protein_id=WP_012105969.1;transl_table=11 NC_009708.1 RefSeq gene 4666873 4667328 . + . ID=gene4178;Name=YPSIP31758_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22095;old_locus_tag=YpsIP31758_4133 NC_009708.1 Protein Homology CDS 4666873 4667328 . + 0 ID=cds4040;Parent=gene4178;Dbxref=Genbank:WP_012105970.1;Name=WP_012105970.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_012105970.1;transl_table=11 NC_009708.1 RefSeq gene 4667688 4668347 . + . ID=gene4179;Name=YPSIP31758_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22100;old_locus_tag=YpsIP31758_4135 NC_009708.1 Protein Homology CDS 4667688 4668347 . + 0 ID=cds4041;Parent=gene4179;Dbxref=Genbank:WP_012105972.1;Name=WP_012105972.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105972.1;transl_table=11 NC_009708.1 RefSeq gene 4668478 4669122 . - . ID=gene4180;Name=YPSIP31758_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22105;old_locus_tag=YpsIP31758_4136 NC_009708.1 Protein Homology CDS 4668478 4669122 . - 0 ID=cds4042;Parent=gene4180;Dbxref=Genbank:WP_002209629.1;Name=WP_002209629.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209629.1;transl_table=11 NC_009708.1 RefSeq gene 4669641 4670621 . + . ID=gene4181;Name=YPSIP31758_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22110;old_locus_tag=YpsIP31758_4137 NC_009708.1 Protein Homology CDS 4669641 4670621 . + 0 ID=cds4043;Parent=gene4181;Dbxref=Genbank:WP_002209630.1;Name=WP_002209630.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_002209630.1;transl_table=11 NC_009708.1 RefSeq gene 4670910 4672973 . + . ID=gene4182;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22115;old_locus_tag=YpsIP31758_4138 NC_009708.1 Protein Homology CDS 4670910 4672973 . + 0 ID=cds4044;Parent=gene4182;Dbxref=Genbank:WP_012105973.1;Name=WP_012105973.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_012105973.1;transl_table=11 NC_009708.1 RefSeq gene 4673387 4673830 . + . ID=gene4183;Name=YPSIP31758_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22120;old_locus_tag=YpsIP31758_4139 NC_009708.1 Protein Homology CDS 4673387 4673830 . + 0 ID=cds4045;Parent=gene4183;Dbxref=Genbank:WP_012105974.1;Name=WP_012105974.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105974.1;transl_table=11 NC_009708.1 RefSeq gene 4673805 4674107 . + . ID=gene4184;Name=YPSIP31758_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22125 NC_009708.1 Protein Homology CDS 4673805 4674107 . + 0 ID=cds4046;Parent=gene4184;Dbxref=Genbank:WP_033851015.1;Name=WP_033851015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033851015.1;transl_table=11 NC_009708.1 RefSeq gene 4674286 4675551 . + . ID=gene4185;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22130;old_locus_tag=YpsIP31758_4140 NC_009708.1 Protein Homology CDS 4674286 4675551 . + 0 ID=cds4047;Parent=gene4185;Dbxref=Genbank:WP_012105975.1;Name=WP_012105975.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_012105975.1;transl_table=11 NC_009708.1 RefSeq gene 4675664 4677322 . - . ID=gene4186;Name=YPSIP31758_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22135;old_locus_tag=YpsIP31758_4141 NC_009708.1 Protein Homology CDS 4675664 4677322 . - 0 ID=cds4048;Parent=gene4186;Dbxref=Genbank:WP_011193331.1;Name=WP_011193331.1;gbkey=CDS;product=transporter;protein_id=WP_011193331.1;transl_table=11 NC_009708.1 RefSeq gene 4677695 4678159 . - . ID=gene4187;Name=YPSIP31758_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22140;old_locus_tag=YpsIP31758_4142 NC_009708.1 Protein Homology CDS 4677695 4678159 . - 0 ID=cds4049;Parent=gene4187;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11 NC_009708.1 RefSeq gene 4678440 4678853 . - . ID=gene4188;Name=YPSIP31758_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22145;old_locus_tag=YpsIP31758_4143 NC_009708.1 Protein Homology CDS 4678440 4678853 . - 0 ID=cds4050;Parent=gene4188;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11 NC_009708.1 RefSeq gene 4679221 4679559 . + . ID=gene4189;Name=YPSIP31758_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22150;old_locus_tag=YpsIP31758_4144 NC_009708.1 Protein Homology CDS 4679221 4679559 . + 0 ID=cds4051;Parent=gene4189;Dbxref=Genbank:WP_002209637.1;Name=WP_002209637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209637.1;transl_table=11 NC_009708.1 RefSeq gene 4679599 4679913 . - . ID=gene4190;Name=YPSIP31758_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22155 NC_009708.1 Protein Homology CDS 4679599 4679913 . - 0 ID=cds4052;Parent=gene4190;Dbxref=Genbank:WP_002228733.1;Name=WP_002228733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228733.1;transl_table=11 NC_009708.1 RefSeq gene 4679903 4680214 . - . ID=gene4191;Name=YPSIP31758_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22160 NC_009708.1 Protein Homology CDS 4679903 4680214 . - 0 ID=cds4053;Parent=gene4191;Dbxref=Genbank:WP_041175812.1;Name=WP_041175812.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175812.1;transl_table=11 NC_009708.1 RefSeq gene 4680422 4681384 . + . ID=gene4192;Name=YPSIP31758_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22165;old_locus_tag=YpsIP31758_4146 NC_009708.1 Protein Homology CDS 4680422 4681384 . + 0 ID=cds4054;Parent=gene4192;Dbxref=Genbank:WP_011193328.1;Name=WP_011193328.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193328.1;transl_table=11 NC_009708.1 RefSeq gene 4681378 4682331 . + . ID=gene4193;Name=YPSIP31758_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22170;old_locus_tag=YpsIP31758_4147 NC_009708.1 Protein Homology CDS 4681378 4682331 . + 0 ID=cds4055;Parent=gene4193;Dbxref=Genbank:WP_011193327.1;Name=WP_011193327.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_011193327.1;transl_table=11 NC_009708.1 RefSeq gene 4682351 4682593 . + . ID=gene4194;Name=YPSIP31758_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22175;old_locus_tag=YpsIP31758_4148 NC_009708.1 Protein Homology CDS 4682351 4682593 . + 0 ID=cds4056;Parent=gene4194;Dbxref=Genbank:WP_041175813.1;Name=WP_041175813.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175813.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4682410 4682833 . + . ID=id366;gbkey=repeat_region NC_009708.1 RefSeq gene 4683069 4683878 . - . ID=gene4195;Name=YPSIP31758_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22180;old_locus_tag=YpsIP31758_4149 NC_009708.1 Protein Homology CDS 4683069 4683878 . - 0 ID=cds4057;Parent=gene4195;Dbxref=Genbank:WP_011193349.1;Name=WP_011193349.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_011193349.1;transl_table=11 NC_009708.1 RefSeq gene 4684094 4686508 . - . ID=gene4196;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22185;old_locus_tag=YpsIP31758_4150 NC_009708.1 Protein Homology CDS 4684094 4686508 . - 0 ID=cds4058;Parent=gene4196;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11 NC_009708.1 RefSeq gene 4686528 4687613 . - . ID=gene4197;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22190;old_locus_tag=YpsIP31758_4151 NC_009708.1 Protein Homology CDS 4686528 4687613 . - 0 ID=cds4059;Parent=gene4197;Dbxref=Genbank:WP_012105977.1;Name=WP_012105977.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_012105977.1;transl_table=11 NC_009708.1 RefSeq gene 4687612 4687782 . + . ID=gene4198;Name=YPSIP31758_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22195 NC_009708.1 Protein Homology CDS 4687612 4687782 . + 0 ID=cds4060;Parent=gene4198;Dbxref=Genbank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;product=recombinase F;protein_id=WP_002218418.1;transl_table=11 NC_009708.1 RefSeq gene 4687786 4688886 . - . ID=gene4199;Name=YPSIP31758_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22200;old_locus_tag=YpsIP31758_4152 NC_009708.1 Protein Homology CDS 4687786 4688886 . - 0 ID=cds4061;Parent=gene4199;Dbxref=Genbank:WP_002209645.1;Name=WP_002209645.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11 NC_009708.1 RefSeq gene 4688891 4690279 . - . ID=gene4200;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22205;old_locus_tag=YpsIP31758_4153 NC_009708.1 Protein Homology CDS 4688891 4690279 . - 0 ID=cds4062;Parent=gene4200;Dbxref=Genbank:WP_002220732.1;Name=WP_002220732.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 NC_009708.1 RefSeq gene 4690995 4691135 . + . ID=gene4201;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22210;old_locus_tag=YpsIP31758_4154 NC_009708.1 Protein Homology CDS 4690995 4691135 . + 0 ID=cds4063;Parent=gene4201;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 NC_009708.1 RefSeq gene 4691154 4691513 . + . ID=gene4202;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22215;old_locus_tag=YpsIP31758_4155 NC_009708.1 Protein Homology CDS 4691154 4691513 . + 0 ID=cds4064;Parent=gene4202;Dbxref=Genbank:WP_002228153.1;Name=WP_002228153.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NC_009708.1 RefSeq gene 4691737 4693377 . + . ID=gene4203;Name=YPSIP31758_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22220;old_locus_tag=YpsIP31758_4157 NC_009708.1 Protein Homology CDS 4691737 4693377 . + 0 ID=cds4065;Parent=gene4203;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11 NC_009708.1 RefSeq gene 4693520 4694884 . + . ID=gene4204;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=YPSIP31758_RS22225;old_locus_tag=YpsIP31758_4158 NC_009708.1 Protein Homology CDS 4693520 4694884 . + 0 ID=cds4066;Parent=gene4204;Dbxref=Genbank:WP_012105980.1;Name=WP_012105980.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_012105980.1;transl_table=11 NC_009708.1 RefSeq gene 4695091 4696290 . + . ID=gene4205;Name=YPSIP31758_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22230;old_locus_tag=YpsIP31758_4159 NC_009708.1 Protein Homology CDS 4695091 4696290 . + 0 ID=cds4067;Parent=gene4205;Dbxref=Genbank:WP_012105981.1;Name=WP_012105981.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_012105981.1;transl_table=11 NC_009708.1 RefSeq gene 4697020 4698348 . - . ID=gene4206;Name=YPSIP31758_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22235;old_locus_tag=YpsIP31758_4161 NC_009708.1 Protein Homology CDS 4697020 4698348 . - 0 ID=cds4068;Parent=gene4206;Dbxref=Genbank:WP_012105983.1;Name=WP_012105983.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_012105983.1;transl_table=11 NC_009708.1 RefSeq repeat_region 4698567 4698739 . + . ID=id367;gbkey=repeat_region NC_009708.1 RefSeq gene 4698841 4699509 . + . ID=gene4207;Name=YPSIP31758_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22240;old_locus_tag=YpsIP31758_4162 NC_009708.1 Protein Homology CDS 4698841 4699509 . + 0 ID=cds4069;Parent=gene4207;Dbxref=Genbank:WP_012105984.1;Name=WP_012105984.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_012105984.1;transl_table=11 NC_009708.1 RefSeq gene 4699525 4700280 . - . ID=gene4208;Name=YPSIP31758_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22245;old_locus_tag=YpsIP31758_4163 NC_009708.1 Protein Homology CDS 4699525 4700280 . - 0 ID=cds4070;Parent=gene4208;Dbxref=Genbank:WP_012105985.1;Name=WP_012105985.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_012105985.1;transl_table=11 NC_009708.1 RefSeq gene 4700282 4701019 . - . ID=gene4209;Name=YPSIP31758_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22250;old_locus_tag=YpsIP31758_4164 NC_009708.1 Protein Homology CDS 4700282 4701019 . - 0 ID=cds4071;Parent=gene4209;Dbxref=Genbank:WP_012105986.1;Name=WP_012105986.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_012105986.1;transl_table=11 NC_009708.1 RefSeq gene 4701202 4702056 . - . ID=gene4210;Name=YPSIP31758_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22255;old_locus_tag=YpsIP31758_4165 NC_009708.1 Protein Homology CDS 4701202 4702056 . - 0 ID=cds4072;Parent=gene4210;Dbxref=Genbank:WP_012105987.1;Name=WP_012105987.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_012105987.1;transl_table=11 NC_009708.1 RefSeq gene 4702276 4702947 . - . ID=gene4211;Name=YPSIP31758_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22260;old_locus_tag=YpsIP31758_4166 NC_009708.1 Protein Homology CDS 4702276 4702947 . - 0 ID=cds4073;Parent=gene4211;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11 NC_009708.1 RefSeq gene 4703243 4703965 . - . ID=gene4212;Name=YPSIP31758_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22265;old_locus_tag=YpsIP31758_4167 NC_009708.1 Protein Homology CDS 4703243 4703965 . - 0 ID=cds4074;Parent=gene4212;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11 NC_009708.1 RefSeq gene 4704053 4704829 . - . ID=gene4213;Name=YPSIP31758_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22270;old_locus_tag=YpsIP31758_4168 NC_009708.1 Protein Homology CDS 4704053 4704829 . - 0 ID=cds4075;Parent=gene4213;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11 NC_009708.1 RefSeq gene 4704910 4705797 . - . ID=gene4214;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22275;old_locus_tag=YpsIP31758_4169 NC_009708.1 Protein Homology CDS 4704910 4705797 . - 0 ID=cds4076;Parent=gene4214;Dbxref=Genbank:WP_012105988.1;Name=WP_012105988.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_012105988.1;transl_table=11 NC_009708.1 RefSeq gene 4705799 4706755 . - . ID=gene4215;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22280;old_locus_tag=YpsIP31758_4170 NC_009708.1 Protein Homology CDS 4705799 4706755 . - 0 ID=cds4077;Parent=gene4215;Dbxref=Genbank:WP_002215558.1;Name=WP_002215558.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002215558.1;transl_table=11 NC_009708.1 RefSeq gene 4706985 4708025 . - . ID=gene4216;Name=YPSIP31758_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22285;old_locus_tag=YpsIP31758_4171 NC_009708.1 Protein Homology CDS 4706985 4708025 . - 0 ID=cds4078;Parent=gene4216;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11 NC_009708.1 RefSeq gene 4708508 4710337 . - . ID=gene4217;Name=YPSIP31758_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22290;old_locus_tag=YpsIP31758_4173 NC_009708.1 Protein Homology CDS 4708508 4710337 . - 0 ID=cds4079;Parent=gene4217;Dbxref=Genbank:WP_012105990.1;Name=WP_012105990.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_012105990.1;transl_table=11 NC_009708.1 RefSeq gene 4710538 4711908 . - . ID=gene4218;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22295;old_locus_tag=YpsIP31758_4174 NC_009708.1 Protein Homology CDS 4710538 4711908 . - 0 ID=cds4080;Parent=gene4218;Dbxref=Genbank:WP_002215550.1;Name=WP_002215550.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_002215550.1;transl_table=11 NC_009708.1 RefSeq gene 4712529 4712951 . - . ID=gene4219;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22300;old_locus_tag=YpsIP31758_4175 NC_009708.1 Protein Homology CDS 4712529 4712951 . - 0 ID=cds4081;Parent=gene4219;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11 NC_009708.1 RefSeq gene 4712973 4714355 . - . ID=gene4220;Name=YPSIP31758_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22305;old_locus_tag=YpsIP31758_4176 NC_009708.1 Protein Homology CDS 4712973 4714355 . - 0 ID=cds4082;Parent=gene4220;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NC_009708.1 RefSeq gene 4714511 4715374 . - . ID=gene4221;Name=YPSIP31758_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22310;old_locus_tag=YpsIP31758_4177 NC_009708.1 Protein Homology CDS 4714511 4715374 . - 0 ID=cds4083;Parent=gene4221;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NC_009708.1 RefSeq gene 4715436 4716977 . - . ID=gene4222;Name=YPSIP31758_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22315;old_locus_tag=YpsIP31758_4178 NC_009708.1 Protein Homology CDS 4715436 4716977 . - 0 ID=cds4084;Parent=gene4222;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NC_009708.1 RefSeq gene 4716992 4717525 . - . ID=gene4223;Name=YPSIP31758_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22320;old_locus_tag=YpsIP31758_4179 NC_009708.1 Protein Homology CDS 4716992 4717525 . - 0 ID=cds4085;Parent=gene4223;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NC_009708.1 RefSeq gene 4717540 4718010 . - . ID=gene4224;Name=YPSIP31758_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22325;old_locus_tag=YpsIP31758_4180 NC_009708.1 Protein Homology CDS 4717540 4718010 . - 0 ID=cds4086;Parent=gene4224;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11 NC_009708.1 RefSeq gene 4718072 4718311 . - . ID=gene4225;Name=YPSIP31758_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22330;old_locus_tag=YpsIP31758_4181 NC_009708.1 Protein Homology CDS 4718072 4718311 . - 0 ID=cds4087;Parent=gene4225;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NC_009708.1 RefSeq gene 4718361 4719185 . - . ID=gene4226;Name=YPSIP31758_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22335;old_locus_tag=YpsIP31758_4182 NC_009708.1 Protein Homology CDS 4718361 4719185 . - 0 ID=cds4088;Parent=gene4226;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11 NC_009708.1 RefSeq gene 4719241 4719624 . - . ID=gene4227;Name=YPSIP31758_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22340;old_locus_tag=YpsIP31758_4183 NC_009708.1 Protein Homology CDS 4719241 4719624 . - 0 ID=cds4089;Parent=gene4227;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NC_009708.1 RefSeq gene 4720291 4720911 . - . ID=gene4228;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22345;old_locus_tag=YpsIP31758_4184 NC_009708.1 Protein Homology CDS 4720291 4720911 . - 0 ID=cds4090;Parent=gene4228;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11 NC_009708.1 RefSeq gene 4721057 4722946 . - . ID=gene4229;Name=YPSIP31758_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22350;old_locus_tag=YpsIP31758_4186 NC_009708.1 Protein Homology CDS 4721057 4722946 . - 0 ID=cds4091;Parent=gene4229;Dbxref=Genbank:WP_012105991.1;Name=WP_012105991.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_012105991.1;transl_table=11 ##sequence-region NC_009705.1 1 153140 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=349747 NC_009705.1 RefSeq region 1 153140 . + . ID=id368;Dbxref=taxon:349747;Is_circular=true;Name=plasmid_153kb;collection-date=1966;gbkey=Src;genome=plasmid;isolation-source=stool of a patient presenting with scarlet-like fever in the Primorski region of the former USSR%3B in 1971 sent to the Institut Pasteur (Paris%2C France) by Dr. Timofeeva (Antiplague Institute%2C Irkoutsk);mol_type=genomic DNA;plasmid-name=plasmid_153kb;serotype=O:1b;strain=IP 31758 NC_009705.1 RefSeq gene 596 1870 . + . ID=gene4230;Name=YPSIP31758_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00345;old_locus_tag=YpsIP31758_B0002 NC_009705.1 Protein Homology CDS 596 1870 . + 0 ID=cds4092;Parent=gene4230;Dbxref=Genbank:WP_011988567.1;Name=WP_011988567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988567.1;transl_table=11 NC_009705.1 RefSeq gene 1964 8365 . + . ID=gene4231;Name=YPSIP31758_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00350;old_locus_tag=YpsIP31758_B0003 NC_009705.1 Protein Homology CDS 1964 8365 . + 0 ID=cds4093;Parent=gene4231;Dbxref=Genbank:WP_011988579.1;Name=WP_011988579.1;gbkey=CDS;product=helicase;protein_id=WP_011988579.1;transl_table=11 NC_009705.1 RefSeq gene 8462 8983 . + . ID=gene4232;Name=YPSIP31758_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00355 NC_009705.1 Protein Homology CDS 8462 8983 . + 0 ID=cds4094;Parent=gene4232;Dbxref=Genbank:WP_041175637.1;Name=WP_041175637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175637.1;transl_table=11 NC_009705.1 RefSeq gene 8970 9767 . + . ID=gene4233;Name=YPSIP31758_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00360 NC_009705.1 Protein Homology CDS 8970 9767 . + 0 ID=cds4095;Parent=gene4233;Dbxref=Genbank:WP_011988609.1;Name=WP_011988609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988609.1;transl_table=11 NC_009705.1 RefSeq gene 9787 10539 . + . ID=gene4234;Name=YPSIP31758_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00365;old_locus_tag=YpsIP31758_B0005 NC_009705.1 Protein Homology CDS 9787 10539 . + 0 ID=cds4096;Parent=gene4234;Dbxref=Genbank:WP_011988525.1;Name=WP_011988525.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988525.1;transl_table=11 NC_009705.1 RefSeq gene 10542 11687 . + . ID=gene4235;Name=YPSIP31758_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00370;old_locus_tag=YpsIP31758_B0006 NC_009705.1 Protein Homology CDS 10542 11687 . + 0 ID=cds4097;Parent=gene4235;Dbxref=Genbank:WP_011988594.1;Name=WP_011988594.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988594.1;transl_table=11 NC_009705.1 RefSeq gene 11698 12858 . + . ID=gene4236;Name=YPSIP31758_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00375;old_locus_tag=YpsIP31758_B0007 NC_009705.1 Protein Homology CDS 11698 12858 . + 0 ID=cds4098;Parent=gene4236;Dbxref=Genbank:WP_011988605.1;Name=WP_011988605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988605.1;transl_table=11 NC_009705.1 RefSeq gene 12866 13993 . + . ID=gene4237;Name=YPSIP31758_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00380;old_locus_tag=YpsIP31758_B0008 NC_009705.1 Protein Homology CDS 12866 13993 . + 0 ID=cds4099;Parent=gene4237;Dbxref=Genbank:WP_041175638.1;Name=WP_041175638.1;gbkey=CDS;product=peptidase M23;protein_id=WP_041175638.1;transl_table=11 NC_009705.1 RefSeq gene 14008 15687 . + . ID=gene4238;Name=YPSIP31758_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00385;old_locus_tag=YpsIP31758_B0009 NC_009705.1 GeneMarkS+ CDS 14008 15687 . + 0 ID=cds4100;Parent=gene4238;Dbxref=Genbank:WP_011988492.1;Name=WP_011988492.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988492.1;transl_table=11 NC_009705.1 RefSeq gene 15793 16500 . - . ID=gene4239;Name=YPSIP31758_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00390;old_locus_tag=YpsIP31758_B0010 NC_009705.1 Protein Homology CDS 15793 16500 . - 0 ID=cds4101;Parent=gene4239;Dbxref=Genbank:WP_011988539.1;Name=WP_011988539.1;gbkey=CDS;product=type IV prepilin peptidase PilD;protein_id=WP_011988539.1;transl_table=11 NC_009705.1 RefSeq gene 16497 16976 . - . ID=gene4240;Name=YPSIP31758_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00395;old_locus_tag=YpsIP31758_B0011 NC_009705.1 Protein Homology CDS 16497 16976 . - 0 ID=cds4102;Parent=gene4240;Dbxref=Genbank:WP_011988569.1;Name=WP_011988569.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_011988569.1;transl_table=11 NC_009705.1 RefSeq gene 17174 17611 . + . ID=gene4241;Name=YPSIP31758_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00400;old_locus_tag=YpsIP31758_B0012 NC_009705.1 Protein Homology CDS 17174 17611 . + 0 ID=cds4103;Parent=gene4241;Dbxref=Genbank:WP_041175639.1;Name=WP_041175639.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175639.1;transl_table=11 NC_009705.1 RefSeq gene 17749 18915 . + . ID=gene4242;Name=YPSIP31758_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00405;old_locus_tag=YpsIP31758_B0013 NC_009705.1 Protein Homology CDS 17749 18915 . + 0 ID=cds4104;Parent=gene4242;Dbxref=Genbank:WP_011988516.1;Name=WP_011988516.1;gbkey=CDS;product=type IV pilus biosynthesis protein PilL;protein_id=WP_011988516.1;transl_table=11 NC_009705.1 RefSeq gene 18931 20625 . + . ID=gene4243;Name=YPSIP31758_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00410;old_locus_tag=YpsIP31758_B0014 NC_009705.1 Protein Homology CDS 18931 20625 . + 0 ID=cds4105;Parent=gene4243;Dbxref=Genbank:WP_011988515.1;Name=WP_011988515.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_011988515.1;transl_table=11 NC_009705.1 RefSeq gene 20644 22251 . + . ID=gene4244;Name=YPSIP31758_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00415;old_locus_tag=YpsIP31758_B0015 NC_009705.1 Protein Homology CDS 20644 22251 . + 0 ID=cds4106;Parent=gene4244;Dbxref=Genbank:WP_041175640.1;Name=WP_041175640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175640.1;transl_table=11 NC_009705.1 RefSeq gene 22238 22774 . + . ID=gene4245;Name=YPSIP31758_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00420;old_locus_tag=YpsIP31758_B0016 NC_009705.1 GeneMarkS+ CDS 22238 22774 . + 0 ID=cds4107;Parent=gene4245;Dbxref=Genbank:WP_011988512.1;Name=WP_011988512.1;gbkey=CDS;product=type IV pilus biogenesis protein PilP;protein_id=WP_011988512.1;transl_table=11 NC_009705.1 RefSeq gene 22802 24301 . + . ID=gene4246;Name=YPSIP31758_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00425;old_locus_tag=YpsIP31758_B0017 NC_009705.1 Protein Homology CDS 22802 24301 . + 0 ID=cds4108;Parent=gene4246;Dbxref=Genbank:WP_011988521.1;Name=WP_011988521.1;gbkey=CDS;product=type IV pilus biosynthesis protein PilQ;protein_id=WP_011988521.1;transl_table=11 NC_009705.1 RefSeq gene 24350 25429 . + . ID=gene4247;Name=YPSIP31758_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00430;old_locus_tag=YpsIP31758_B0018 NC_009705.1 Protein Homology CDS 24350 25429 . + 0 ID=cds4109;Parent=gene4247;Dbxref=Genbank:WP_011988489.1;Name=WP_011988489.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_011988489.1;transl_table=11 NC_009705.1 RefSeq gene 25453 25980 . + . ID=gene4248;Name=YPSIP31758_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00435;old_locus_tag=YpsIP31758_B0019 NC_009705.1 Protein Homology CDS 25453 25980 . + 0 ID=cds4110;Parent=gene4248;Dbxref=Genbank:WP_011988606.1;Name=WP_011988606.1;gbkey=CDS;product=type IV prepilin domain-containing protein PilS;protein_id=WP_011988606.1;transl_table=11 NC_009705.1 RefSeq gene 26039 26974 . + . ID=gene4249;Name=YPSIP31758_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00440;old_locus_tag=YpsIP31758_B0020 NC_009705.1 Protein Homology CDS 26039 26974 . + 0 ID=cds4111;Parent=gene4249;Dbxref=Genbank:WP_049756370.1;Name=WP_049756370.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756370.1;transl_table=11 NC_009705.1 RefSeq gene 26993 28279 . + . ID=gene4250;Name=YPSIP31758_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00445;old_locus_tag=YpsIP31758_B0021 NC_009705.1 Protein Homology CDS 26993 28279 . + 0 ID=cds4112;Parent=gene4250;Dbxref=Genbank:WP_011988482.1;Name=WP_011988482.1;gbkey=CDS;product=type IV pilus biogenesis protein PilV;protein_id=WP_011988482.1;transl_table=11 NC_009705.1 RefSeq gene 28990 30117 . + . ID=gene4251;Name=YPSIP31758_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00450;old_locus_tag=YpsIP31758_B0022 NC_009705.1 Protein Homology CDS 28990 30117 . + 0 ID=cds4113;Parent=gene4251;Dbxref=Genbank:WP_011988544.1;Name=WP_011988544.1;gbkey=CDS;product=DNA recombinase;protein_id=WP_011988544.1;transl_table=11 NC_009705.1 RefSeq gene 30238 30870 . - . ID=gene4252;Name=YPSIP31758_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00455;old_locus_tag=YpsIP31758_B0023 NC_009705.1 Protein Homology CDS 30238 30870 . - 0 ID=cds4114;Parent=gene4252;Dbxref=Genbank:WP_011988610.1;Name=WP_011988610.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988610.1;transl_table=11 NC_009705.1 RefSeq gene 31244 32746 . - . ID=gene4253;Name=YPSIP31758_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00460;old_locus_tag=YpsIP31758_B0025 NC_009705.1 Protein Homology CDS 31244 32746 . - 0 ID=cds4115;Parent=gene4253;Dbxref=Genbank:WP_011988585.1;Name=WP_011988585.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988585.1;transl_table=11 NC_009705.1 RefSeq gene 32927 33907 . + . ID=gene4254;Name=YPSIP31758_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00465;old_locus_tag=YpsIP31758_B0026 NC_009705.1 Protein Homology CDS 32927 33907 . + 0 ID=cds4116;Parent=gene4254;Dbxref=Genbank:WP_011988526.1;Name=WP_011988526.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988526.1;transl_table=11 NC_009705.1 RefSeq gene 33907 34389 . + . ID=gene4255;Name=YPSIP31758_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00470;old_locus_tag=YpsIP31758_B0027 NC_009705.1 Protein Homology CDS 33907 34389 . + 0 ID=cds4117;Parent=gene4255;Dbxref=Genbank:WP_011988575.1;Name=WP_011988575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988575.1;transl_table=11 NC_009705.1 RefSeq gene 34389 35030 . + . ID=gene4256;Name=YPSIP31758_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00475;old_locus_tag=YpsIP31758_B0028 NC_009705.1 GeneMarkS+ CDS 34389 35030 . + 0 ID=cds4118;Parent=gene4256;Dbxref=Genbank:WP_011988513.1;Name=WP_011988513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988513.1;transl_table=11 NC_009705.1 RefSeq gene 35096 35545 . + . ID=gene4257;Name=YPSIP31758_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00480;old_locus_tag=YpsIP31758_B0029 NC_009705.1 GeneMarkS+ CDS 35096 35545 . + 0 ID=cds4119;Parent=gene4257;Dbxref=Genbank:WP_011988540.1;Name=WP_011988540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988540.1;transl_table=11 NC_009705.1 RefSeq gene 35580 35987 . + . ID=gene4258;Name=YPSIP31758_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00485;old_locus_tag=YpsIP31758_B0030 NC_009705.1 Protein Homology CDS 35580 35987 . + 0 ID=cds4120;Parent=gene4258;Dbxref=Genbank:WP_011988581.1;Name=WP_011988581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988581.1;transl_table=11 NC_009705.1 RefSeq gene 35996 37555 . + . ID=gene4259;Name=YPSIP31758_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00490;old_locus_tag=YpsIP31758_B0031 NC_009705.1 Protein Homology CDS 35996 37555 . + 0 ID=cds4121;Parent=gene4259;Dbxref=Genbank:WP_011988561.1;Name=WP_011988561.1;gbkey=CDS;product=putative DNA topoisomerase;protein_id=WP_011988561.1;transl_table=11 NC_009705.1 RefSeq gene 37527 37994 . + . ID=gene4260;Name=YPSIP31758_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22370;old_locus_tag=YpsIP31758_B0032 NC_009705.1 Protein Homology CDS 37527 37994 . + 0 ID=cds4122;Parent=gene4260;Dbxref=Genbank:WP_011988531.1;Name=WP_011988531.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988531.1;transl_table=11 NC_009705.1 RefSeq gene 38031 40478 . + . ID=gene4261;Name=YPSIP31758_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00500;old_locus_tag=YpsIP31758_B0033 NC_009705.1 Protein Homology CDS 38031 40478 . + 0 ID=cds4123;Parent=gene4261;Dbxref=Genbank:WP_011988545.1;Name=WP_011988545.1;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_011988545.1;transl_table=11 NC_009705.1 RefSeq gene 40519 40713 . + . ID=gene4262;Name=YPSIP31758_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00505 NC_009705.1 GeneMarkS+ CDS 40519 40713 . + 0 ID=cds4124;Parent=gene4262;Dbxref=Genbank:WP_041175642.1;Name=WP_041175642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175642.1;transl_table=11 NC_009705.1 RefSeq gene 40729 42777 . + . ID=gene4263;Name=YPSIP31758_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22375;old_locus_tag=YpsIP31758_B0034 NC_009705.1 Protein Homology CDS 40729 42777 . + 0 ID=cds4125;Parent=gene4263;Dbxref=Genbank:WP_011988491.1;Name=WP_011988491.1;gbkey=CDS;product=putative DNA replication primase;protein_id=WP_011988491.1;transl_table=11 NC_009705.1 RefSeq gene 42851 43351 . + . ID=gene4264;Name=YPSIP31758_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00515;old_locus_tag=YpsIP31758_B0035 NC_009705.1 GeneMarkS+ CDS 42851 43351 . + 0 ID=cds4126;Parent=gene4264;Dbxref=Genbank:WP_011988538.1;Name=WP_011988538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988538.1;transl_table=11 NC_009705.1 RefSeq gene 44144 44341 . - . ID=gene4265;Name=YPSIP31758_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00520 NC_009705.1 GeneMarkS+ CDS 44144 44341 . - 0 ID=cds4127;Parent=gene4265;Dbxref=Genbank:WP_041175643.1;Name=WP_041175643.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175643.1;transl_table=11 NC_009705.1 RefSeq gene 44523 45080 . + . ID=gene4266;Name=YPSIP31758_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22380;old_locus_tag=YpsIP31758_B0037 NC_009705.1 Protein Homology CDS 44523 45080 . + 0 ID=cds4128;Parent=gene4266;Dbxref=Genbank:WP_011988527.1;Name=WP_011988527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988527.1;transl_table=11 NC_009705.1 RefSeq gene 45070 45666 . + . ID=gene4267;Name=YPSIP31758_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00530;old_locus_tag=YpsIP31758_B0038 NC_009705.1 Protein Homology CDS 45070 45666 . + 0 ID=cds4129;Parent=gene4267;Dbxref=Genbank:WP_011988485.1;Name=WP_011988485.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988485.1;transl_table=11 NC_009705.1 RefSeq gene 45659 46153 . + . ID=gene4268;Name=YPSIP31758_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00535;old_locus_tag=YpsIP31758_B0039 NC_009705.1 Protein Homology CDS 45659 46153 . + 0 ID=cds4130;Parent=gene4268;Dbxref=Genbank:WP_011988563.1;Name=WP_011988563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988563.1;transl_table=11 NC_009705.1 RefSeq gene 46146 46808 . + . ID=gene4269;Name=YPSIP31758_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00540;old_locus_tag=YpsIP31758_B0040 NC_009705.1 GeneMarkS+ CDS 46146 46808 . + 0 ID=cds4131;Parent=gene4269;Dbxref=Genbank:WP_011988501.1;Name=WP_011988501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988501.1;transl_table=11 NC_009705.1 RefSeq gene 46810 47070 . + . ID=gene4270;Name=YPSIP31758_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00545 NC_009705.1 GeneMarkS+ CDS 46810 47070 . + 0 ID=cds4132;Parent=gene4270;Dbxref=Genbank:WP_041175644.1;Name=WP_041175644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175644.1;transl_table=11 NC_009705.1 RefSeq gene 47080 47271 . + . ID=gene4271;Name=YPSIP31758_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00550;old_locus_tag=YpsIP31758_B0041 NC_009705.1 Protein Homology CDS 47080 47271 . + 0 ID=cds4133;Parent=gene4271;Dbxref=Genbank:WP_011988597.1;Name=WP_011988597.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988597.1;transl_table=11 NC_009705.1 RefSeq gene 47271 47531 . + . ID=gene4272;Name=YPSIP31758_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00555;old_locus_tag=YpsIP31758_B0042 NC_009705.1 Protein Homology CDS 47271 47531 . + 0 ID=cds4134;Parent=gene4272;Dbxref=Genbank:WP_011988596.1;Name=WP_011988596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988596.1;transl_table=11 NC_009705.1 RefSeq gene 47521 47799 . + . ID=gene4273;Name=YPSIP31758_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00560 NC_009705.1 GeneMarkS+ CDS 47521 47799 . + 0 ID=cds4135;Parent=gene4273;Dbxref=Genbank:WP_041175645.1;Name=WP_041175645.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175645.1;transl_table=11 NC_009705.1 RefSeq gene 47948 48322 . + . ID=gene4274;Name=YPSIP31758_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00565 NC_009705.1 GeneMarkS+ CDS 47948 48322 . + 0 ID=cds4136;Parent=gene4274;Dbxref=Genbank:WP_041175646.1;Name=WP_041175646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175646.1;transl_table=11 NC_009705.1 RefSeq gene 48587 48997 . - . ID=gene4275;Name=YPSIP31758_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00570 NC_009705.1 GeneMarkS+ CDS 48587 48997 . - 0 ID=cds4137;Parent=gene4275;Dbxref=Genbank:WP_041175647.1;Name=WP_041175647.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175647.1;transl_table=11 NC_009705.1 RefSeq gene 49007 49552 . - . ID=gene4276;Name=YPSIP31758_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00575;old_locus_tag=YpsIP31758_B0043 NC_009705.1 Protein Homology CDS 49007 49552 . - 0 ID=cds4138;Parent=gene4276;Dbxref=Genbank:WP_011988601.1;Name=WP_011988601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988601.1;transl_table=11 NC_009705.1 RefSeq gene 49728 49934 . + . ID=gene4277;Name=YPSIP31758_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00580;old_locus_tag=YpsIP31758_B0044 NC_009705.1 Protein Homology CDS 49728 49934 . + 0 ID=cds4139;Parent=gene4277;Dbxref=Genbank:WP_011988552.1;Name=WP_011988552.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011988552.1;transl_table=11 NC_009705.1 RefSeq gene 50039 50230 . - . ID=gene4278;Name=YPSIP31758_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00585 NC_009705.1 Protein Homology CDS 50039 50230 . - 0 ID=cds4140;Parent=gene4278;Dbxref=Genbank:WP_041175691.1;Name=WP_041175691.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175691.1;transl_table=11 NC_009705.1 RefSeq gene 50743 50937 . + . ID=gene4279;Name=YPSIP31758_RS00590;end_range=50937,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS00590;partial=true;pseudo=true NC_009705.1 Protein Homology CDS 50743 50937 . + 0 ID=cds4141;Parent=gene4279;end_range=50937,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_009705.1 RefSeq gene 51008 51259 . + . ID=gene4280;Name=YPSIP31758_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00595;old_locus_tag=YpsIP31758_B0045 NC_009705.1 Protein Homology CDS 51008 51259 . + 0 ID=cds4142;Parent=gene4280;Dbxref=Genbank:WP_011988496.1;Name=WP_011988496.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988496.1;transl_table=11 NC_009705.1 RefSeq gene 51288 52031 . + . ID=gene4281;Name=YPSIP31758_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00600;old_locus_tag=YpsIP31758_B0046 NC_009705.1 Protein Homology CDS 51288 52031 . + 0 ID=cds4143;Parent=gene4281;Dbxref=Genbank:WP_041175648.1;Name=WP_041175648.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175648.1;transl_table=11 NC_009705.1 RefSeq gene 52482 53237 . - . ID=gene4282;Name=YPSIP31758_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00605;old_locus_tag=YpsIP31758_B0047 NC_009705.1 Protein Homology CDS 52482 53237 . - 0 ID=cds4144;Parent=gene4282;Dbxref=Genbank:WP_011988587.1;Name=WP_011988587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988587.1;transl_table=11 NC_009705.1 RefSeq gene 53497 53610 . - . ID=gene4283;Name=YPSIP31758_RS00610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS00610;old_locus_tag=YpsIP31758_B0048;partial=true;pseudo=true;start_range=.,53497 NC_009705.1 Protein Homology CDS 53497 53610 . - 0 ID=cds4145;Parent=gene4283;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,53497;transl_table=11 NC_009705.1 RefSeq gene 53809 54195 . - . ID=gene4284;Name=YPSIP31758_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00615;old_locus_tag=YpsIP31758_B0049 NC_009705.1 Protein Homology CDS 53809 54195 . - 0 ID=cds4146;Parent=gene4284;Dbxref=Genbank:WP_011988598.1;Name=WP_011988598.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988598.1;transl_table=11 NC_009705.1 RefSeq gene 54197 55375 . - . ID=gene4285;Name=YPSIP31758_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00620;old_locus_tag=YpsIP31758_B0050 NC_009705.1 Protein Homology CDS 54197 55375 . - 0 ID=cds4147;Parent=gene4285;Dbxref=Genbank:WP_011988559.1;Name=WP_011988559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988559.1;transl_table=11 NC_009705.1 RefSeq gene 55378 55665 . - . ID=gene4286;Name=YPSIP31758_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00625 NC_009705.1 Protein Homology CDS 55378 55665 . - 0 ID=cds4148;Parent=gene4286;Dbxref=Genbank:WP_041175693.1;Name=WP_041175693.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175693.1;transl_table=11 NC_009705.1 RefSeq gene 56448 56867 . + . ID=gene4287;Name=YPSIP31758_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00635;old_locus_tag=YpsIP31758_B0052 NC_009705.1 Protein Homology CDS 56448 56867 . + 0 ID=cds4149;Parent=gene4287;Dbxref=Genbank:WP_011988549.1;Name=WP_011988549.1;gbkey=CDS;product=protein mucA';protein_id=WP_011988549.1;transl_table=11 NC_009705.1 RefSeq gene 56870 58135 . + . ID=gene4288;Name=YPSIP31758_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00640;old_locus_tag=YpsIP31758_B0053 NC_009705.1 Protein Homology CDS 56870 58135 . + 0 ID=cds4150;Parent=gene4288;Dbxref=Genbank:WP_011988528.1;Name=WP_011988528.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;product=DNA polymerase V subunit UmuC;protein_id=WP_011988528.1;transl_table=11 NC_009705.1 RefSeq gene 58370 58570 . + . ID=gene4289;Name=YPSIP31758_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00645;old_locus_tag=YpsIP31758_B0054 NC_009705.1 Protein Homology CDS 58370 58570 . + 0 ID=cds4151;Parent=gene4289;Dbxref=Genbank:WP_011988607.1;Name=WP_011988607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988607.1;transl_table=11 NC_009705.1 RefSeq gene 58563 59291 . + . ID=gene4290;Name=YPSIP31758_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00650;old_locus_tag=YpsIP31758_B0055 NC_009705.1 Protein Homology CDS 58563 59291 . + 0 ID=cds4152;Parent=gene4290;Dbxref=Genbank:WP_011988589.1;Name=WP_011988589.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988589.1;transl_table=11 NC_009705.1 RefSeq gene 59791 60450 . + . ID=gene4291;Name=YPSIP31758_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00655;old_locus_tag=YpsIP31758_B0056 NC_009705.1 GeneMarkS+ CDS 59791 60450 . + 0 ID=cds4153;Parent=gene4291;Dbxref=Genbank:WP_011988503.1;Name=WP_011988503.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988503.1;transl_table=11 NC_009705.1 RefSeq gene 60616 61206 . + . ID=gene4292;Name=YPSIP31758_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00660;old_locus_tag=YpsIP31758_B0057 NC_009705.1 GeneMarkS+ CDS 60616 61206 . + 0 ID=cds4154;Parent=gene4292;Dbxref=Genbank:WP_011988500.1;Name=WP_011988500.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988500.1;transl_table=11 NC_009705.1 RefSeq gene 61336 62319 . + . ID=gene4293;Name=YPSIP31758_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00665;old_locus_tag=YpsIP31758_B0058 NC_009705.1 Protein Homology CDS 61336 62319 . + 0 ID=cds4155;Parent=gene4293;Dbxref=Genbank:WP_011988582.1;Name=WP_011988582.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988582.1;transl_table=11 NC_009705.1 RefSeq gene 62303 63076 . + . ID=gene4294;Name=YPSIP31758_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00670 NC_009705.1 Protein Homology CDS 62303 63076 . + 0 ID=cds4156;Parent=gene4294;Dbxref=Genbank:WP_049756371.1;Name=WP_049756371.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756371.1;transl_table=11 NC_009705.1 RefSeq gene 63342 63545 . + . ID=gene4295;Name=YPSIP31758_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00675;old_locus_tag=YpsIP31758_B0060 NC_009705.1 Protein Homology CDS 63342 63545 . + 0 ID=cds4157;Parent=gene4295;Dbxref=Genbank:WP_041175696.1;Name=WP_041175696.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_041175696.1;transl_table=11 NC_009705.1 RefSeq gene 63912 65165 . + . ID=gene4296;Name=YPSIP31758_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00680;old_locus_tag=YpsIP31758_B0061 NC_009705.1 Protein Homology CDS 63912 65165 . + 0 ID=cds4158;Parent=gene4296;Dbxref=Genbank:WP_011988564.1;Name=WP_011988564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988564.1;transl_table=11 NC_009705.1 RefSeq gene 65878 66474 . + . ID=gene4297;Name=YPSIP31758_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00685;old_locus_tag=YpsIP31758_B0062 NC_009705.1 Protein Homology CDS 65878 66474 . + 0 ID=cds4159;Parent=gene4297;Dbxref=Genbank:WP_011988554.1;Name=WP_011988554.1;gbkey=CDS;product=GTP cyclohydrolase;protein_id=WP_011988554.1;transl_table=11 NC_009705.1 RefSeq gene 66487 68148 . + . ID=gene4298;Name=YPSIP31758_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00690;old_locus_tag=YpsIP31758_B0063 NC_009705.1 Protein Homology CDS 66487 68148 . + 0 ID=cds4160;Parent=gene4298;Dbxref=Genbank:WP_011988522.1;Name=WP_011988522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988522.1;transl_table=11 NC_009705.1 RefSeq gene 68168 69187 . + . ID=gene4299;Name=YPSIP31758_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00695;old_locus_tag=YpsIP31758_B0064 NC_009705.1 Protein Homology CDS 68168 69187 . + 0 ID=cds4161;Parent=gene4299;Dbxref=Genbank:WP_041175649.1;Name=WP_041175649.1;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_041175649.1;transl_table=11 NC_009705.1 RefSeq gene 69197 71044 . + . ID=gene4300;Name=YPSIP31758_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00700;old_locus_tag=YpsIP31758_B0065 NC_009705.1 Protein Homology CDS 69197 71044 . + 0 ID=cds4162;Parent=gene4300;Dbxref=Genbank:WP_011988573.1;Name=WP_011988573.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988573.1;transl_table=11 NC_009705.1 RefSeq gene 71244 72476 . + . ID=gene4301;Name=YPSIP31758_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00705;old_locus_tag=YpsIP31758_B0066 NC_009705.1 Protein Homology CDS 71244 72476 . + 0 ID=cds4163;Parent=gene4301;Dbxref=Genbank:WP_011988490.1;Name=WP_011988490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988490.1;transl_table=11 NC_009705.1 RefSeq gene 72473 73063 . + . ID=gene4302;Name=YPSIP31758_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00710;old_locus_tag=YpsIP31758_B0067 NC_009705.1 Protein Homology CDS 72473 73063 . + 0 ID=cds4164;Parent=gene4302;Dbxref=Genbank:WP_041175650.1;Name=WP_041175650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175650.1;transl_table=11 NC_009705.1 RefSeq gene 73065 73697 . + . ID=gene4303;Name=YPSIP31758_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00715 NC_009705.1 Protein Homology CDS 73065 73697 . + 0 ID=cds4165;Parent=gene4303;Dbxref=Genbank:WP_041175651.1;Name=WP_041175651.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175651.1;transl_table=11 NC_009705.1 RefSeq gene 74150 74806 . - . ID=gene4304;Name=YPSIP31758_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00720;old_locus_tag=YpsIP31758_B0068 NC_009705.1 GeneMarkS+ CDS 74150 74806 . - 0 ID=cds4166;Parent=gene4304;Dbxref=Genbank:WP_011988584.1;Name=WP_011988584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988584.1;transl_table=11 NC_009705.1 RefSeq gene 75263 75571 . + . ID=gene4305;Name=YPSIP31758_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00725 NC_009705.1 Protein Homology CDS 75263 75571 . + 0 ID=cds4167;Parent=gene4305;Dbxref=Genbank:WP_041175652.1;Name=WP_041175652.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175652.1;transl_table=11 NC_009705.1 RefSeq gene 75564 76358 . - . ID=gene4306;Name=YPSIP31758_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00730;old_locus_tag=YpsIP31758_B0070 NC_009705.1 Protein Homology CDS 75564 76358 . - 0 ID=cds4168;Parent=gene4306;Dbxref=Genbank:WP_011988586.1;Name=WP_011988586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988586.1;transl_table=11 NC_009705.1 RefSeq gene 76523 77671 . - . ID=gene4307;Name=YPSIP31758_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00735 NC_009705.1 Protein Homology CDS 76523 77671 . - 0 ID=cds4169;Parent=gene4307;Dbxref=Genbank:WP_041175653.1;Name=WP_041175653.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175653.1;transl_table=11 NC_009705.1 RefSeq gene 78329 79402 . - . ID=gene4308;Name=YPSIP31758_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00740;old_locus_tag=YpsIP31758_B0072 NC_009705.1 Protein Homology CDS 78329 79402 . - 0 ID=cds4170;Parent=gene4308;Dbxref=Genbank:WP_011988612.1;Name=WP_011988612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988612.1;transl_table=11 NC_009705.1 RefSeq gene 79827 80105 . - . ID=gene4309;Name=YPSIP31758_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00745 NC_009705.1 Protein Homology CDS 79827 80105 . - 0 ID=cds4171;Parent=gene4309;Dbxref=Genbank:WP_041175654.1;Name=WP_041175654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175654.1;transl_table=11 NC_009705.1 RefSeq gene 80522 80860 . + . ID=gene4310;Name=YPSIP31758_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00750 NC_009705.1 Protein Homology CDS 80522 80860 . + 0 ID=cds4172;Parent=gene4310;Dbxref=Genbank:WP_041175655.1;Name=WP_041175655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175655.1;transl_table=11 NC_009705.1 RefSeq gene 81046 81588 . - . ID=gene4311;Name=YPSIP31758_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00755 NC_009705.1 GeneMarkS+ CDS 81046 81588 . - 0 ID=cds4173;Parent=gene4311;Dbxref=Genbank:WP_041175656.1;Name=WP_041175656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175656.1;transl_table=11 NC_009705.1 RefSeq gene 81709 82041 . - . ID=gene4312;Name=YPSIP31758_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00760 NC_009705.1 Protein Homology CDS 81709 82041 . - 0 ID=cds4174;Parent=gene4312;Dbxref=Genbank:WP_041175657.1;Name=WP_041175657.1;Note=ChpA%3B endoribonuclease%3B toxin of the MazF-MazE (ChpA-ChpR) toxin-antitoxin system;gbkey=CDS;product=toxin MazF;protein_id=WP_041175657.1;transl_table=11 NC_009705.1 RefSeq gene 82045 82290 . - . ID=gene4313;Name=YPSIP31758_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00765;old_locus_tag=YpsIP31758_B0073 NC_009705.1 Protein Homology CDS 82045 82290 . - 0 ID=cds4175;Parent=gene4313;Dbxref=Genbank:WP_011988565.1;Name=WP_011988565.1;gbkey=CDS;product=PbsX family transcriptional regulator;protein_id=WP_011988565.1;transl_table=11 NC_009705.1 RefSeq gene 82551 83390 . - . ID=gene4314;Name=YPSIP31758_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00770;old_locus_tag=YpsIP31758_B0074 NC_009705.1 Protein Homology CDS 82551 83390 . - 0 ID=cds4176;Parent=gene4314;Dbxref=Genbank:WP_011988487.1;Name=WP_011988487.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988487.1;transl_table=11 NC_009705.1 RefSeq gene 83794 84912 . - . ID=gene4315;Name=YPSIP31758_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00775;old_locus_tag=YpsIP31758_B0075 NC_009705.1 Protein Homology CDS 83794 84912 . - 0 ID=cds4177;Parent=gene4315;Dbxref=Genbank:WP_011988604.1;Name=WP_011988604.1;gbkey=CDS;product=conjugal transfer protein TraE;protein_id=WP_011988604.1;transl_table=11 NC_009705.1 RefSeq gene 84890 85228 . + . ID=gene4316;Name=YPSIP31758_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00780 NC_009705.1 GeneMarkS+ CDS 84890 85228 . + 0 ID=cds4178;Parent=gene4316;Dbxref=Genbank:WP_041175658.1;Name=WP_041175658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175658.1;transl_table=11 NC_009705.1 RefSeq gene 85320 85781 . + . ID=gene4317;Name=YPSIP31758_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00785 NC_009705.1 Protein Homology CDS 85320 85781 . + 0 ID=cds4179;Parent=gene4317;Dbxref=Genbank:WP_041175659.1;Name=WP_041175659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175659.1;transl_table=11 NC_009705.1 RefSeq gene 86182 87726 . - . ID=gene4318;Name=YPSIP31758_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00790;old_locus_tag=YpsIP31758_B0076 NC_009705.1 Protein Homology CDS 86182 87726 . - 0 ID=cds4180;Parent=gene4318;Dbxref=Genbank:WP_011988546.1;Name=WP_011988546.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988546.1;transl_table=11 NC_009705.1 RefSeq gene 87771 88010 . - . ID=gene4319;Name=YPSIP31758_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00795 NC_009705.1 GeneMarkS+ CDS 87771 88010 . - 0 ID=cds4181;Parent=gene4319;Dbxref=Genbank:WP_041175660.1;Name=WP_041175660.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175660.1;transl_table=11 NC_009705.1 RefSeq gene 88093 89100 . - . ID=gene4320;Name=YPSIP31758_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00800;old_locus_tag=YpsIP31758_B0077 NC_009705.1 Protein Homology CDS 88093 89100 . - 0 ID=cds4182;Parent=gene4320;Dbxref=Genbank:WP_011988602.1;Name=WP_011988602.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988602.1;transl_table=11 NC_009705.1 RefSeq gene 89530 89916 . - . ID=gene4321;Name=YPSIP31758_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00805;old_locus_tag=YpsIP31758_B0078 NC_009705.1 Protein Homology CDS 89530 89916 . - 0 ID=cds4183;Parent=gene4321;Dbxref=Genbank:WP_011988558.1;Name=WP_011988558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988558.1;transl_table=11 NC_009705.1 RefSeq gene 89918 91330 . - . ID=gene4322;Name=YPSIP31758_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00810;old_locus_tag=YpsIP31758_B0079 NC_009705.1 Protein Homology CDS 89918 91330 . - 0 ID=cds4184;Parent=gene4322;Dbxref=Genbank:WP_011988534.1;Name=WP_011988534.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988534.1;transl_table=11 NC_009705.1 RefSeq gene 91343 91840 . - . ID=gene4323;Name=YPSIP31758_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00815;old_locus_tag=YpsIP31758_B0080 NC_009705.1 Protein Homology CDS 91343 91840 . - 0 ID=cds4185;Parent=gene4323;Dbxref=Genbank:WP_041175697.1;Name=WP_041175697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175697.1;transl_table=11 NC_009705.1 RefSeq gene 92100 92549 . + . ID=gene4324;Name=YPSIP31758_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00820;old_locus_tag=YpsIP31758_B0081 NC_009705.1 GeneMarkS+ CDS 92100 92549 . + 0 ID=cds4186;Parent=gene4324;Dbxref=Genbank:WP_011988574.1;Name=WP_011988574.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988574.1;transl_table=11 NC_009705.1 RefSeq gene 92987 93670 . + . ID=gene4325;Name=YPSIP31758_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00825;old_locus_tag=YpsIP31758_B0082 NC_009705.1 Protein Homology CDS 92987 93670 . + 0 ID=cds4187;Parent=gene4325;Dbxref=Genbank:WP_011988509.1;Name=WP_011988509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988509.1;transl_table=11 NC_009705.1 RefSeq gene 93811 94704 . - . ID=gene4326;Name=YPSIP31758_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00830;old_locus_tag=YpsIP31758_B0083 NC_009705.1 Protein Homology CDS 93811 94704 . - 0 ID=cds4188;Parent=gene4326;Dbxref=Genbank:WP_011988556.1;Name=WP_011988556.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988556.1;transl_table=11 NC_009705.1 RefSeq gene 94949 95170 . - . ID=gene4327;Name=YPSIP31758_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00835 NC_009705.1 GeneMarkS+ CDS 94949 95170 . - 0 ID=cds4189;Parent=gene4327;Dbxref=Genbank:WP_041175661.1;Name=WP_041175661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175661.1;transl_table=11 NC_009705.1 RefSeq gene 95269 95619 . - . ID=gene4328;Name=YPSIP31758_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00840;old_locus_tag=YpsIP31758_B0084 NC_009705.1 Protein Homology CDS 95269 95619 . - 0 ID=cds4190;Parent=gene4328;Dbxref=Genbank:WP_011988486.1;Name=WP_011988486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988486.1;transl_table=11 NC_009705.1 RefSeq gene 95833 96606 . + . ID=gene4329;Name=YPSIP31758_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00845;old_locus_tag=YpsIP31758_B0085 NC_009705.1 GeneMarkS+ CDS 95833 96606 . + 0 ID=cds4191;Parent=gene4329;Dbxref=Genbank:WP_011988562.1;Name=WP_011988562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988562.1;transl_table=11 NC_009705.1 RefSeq gene 96631 96984 . + . ID=gene4330;Name=YPSIP31758_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00850 NC_009705.1 Protein Homology CDS 96631 96984 . + 0 ID=cds4192;Parent=gene4330;Dbxref=Genbank:WP_041175662.1;Name=WP_041175662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175662.1;transl_table=11 NC_009705.1 RefSeq gene 97034 97675 . + . ID=gene4331;Name=YPSIP31758_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00855;old_locus_tag=YpsIP31758_B0086 NC_009705.1 GeneMarkS+ CDS 97034 97675 . + 0 ID=cds4193;Parent=gene4331;Dbxref=Genbank:WP_011988599.1;Name=WP_011988599.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988599.1;transl_table=11 NC_009705.1 RefSeq gene 97665 98189 . + . ID=gene4332;Name=YPSIP31758_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00860;old_locus_tag=YpsIP31758_B0087 NC_009705.1 Protein Homology CDS 97665 98189 . + 0 ID=cds4194;Parent=gene4332;Dbxref=Genbank:WP_011988502.1;Name=WP_011988502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988502.1;transl_table=11 NC_009705.1 RefSeq gene 98182 98637 . + . ID=gene4333;Name=YPSIP31758_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00865;old_locus_tag=YpsIP31758_B0088 NC_009705.1 Protein Homology CDS 98182 98637 . + 0 ID=cds4195;Parent=gene4333;Dbxref=Genbank:WP_011988530.1;Name=WP_011988530.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988530.1;transl_table=11 NC_009705.1 RefSeq gene 98637 99281 . + . ID=gene4334;Name=YPSIP31758_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22385;old_locus_tag=YpsIP31758_B0089 NC_009705.1 Protein Homology CDS 98637 99281 . + 0 ID=cds4196;Parent=gene4334;Dbxref=Genbank:WP_011988576.1;Name=WP_011988576.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988576.1;transl_table=11 NC_009705.1 RefSeq gene 99453 99839 . + . ID=gene4335;Name=YPSIP31758_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00875 NC_009705.1 Protein Homology CDS 99453 99839 . + 0 ID=cds4197;Parent=gene4335;Dbxref=Genbank:WP_041175663.1;Name=WP_041175663.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175663.1;transl_table=11 NC_009705.1 RefSeq gene 100218 101069 . - . ID=gene4336;Name=YPSIP31758_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00880;old_locus_tag=YpsIP31758_B0090 NC_009705.1 Protein Homology CDS 100218 101069 . - 0 ID=cds4198;Parent=gene4336;Dbxref=Genbank:WP_011988505.1;Name=WP_011988505.1;gbkey=CDS;product=endonuclease;protein_id=WP_011988505.1;transl_table=11 NC_009705.1 RefSeq gene 101361 102191 . - . ID=gene4337;Name=YPSIP31758_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22390;old_locus_tag=YpsIP31758_B0091 NC_009705.1 Protein Homology CDS 101361 102191 . - 0 ID=cds4199;Parent=gene4337;Dbxref=Genbank:WP_011988479.1;Name=WP_011988479.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988479.1;transl_table=11 NC_009705.1 RefSeq gene 102713 103843 . + . ID=gene4338;Name=YPSIP31758_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00890;old_locus_tag=YpsIP31758_B0092 NC_009705.1 Protein Homology CDS 102713 103843 . + 0 ID=cds4200;Parent=gene4338;Dbxref=Genbank:WP_011988568.1;Name=WP_011988568.1;gbkey=CDS;product=putative integrase family protein;protein_id=WP_011988568.1;transl_table=11 NC_009705.1 RefSeq gene 104086 104397 . - . ID=gene4339;Name=YPSIP31758_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00895 NC_009705.1 Protein Homology CDS 104086 104397 . - 0 ID=cds4201;Parent=gene4339;Dbxref=Genbank:WP_049756372.1;Name=WP_049756372.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756372.1;transl_table=11 NC_009705.1 RefSeq gene 104452 105609 . - . ID=gene4340;Name=YPSIP31758_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00900;old_locus_tag=YpsIP31758_B0093 NC_009705.1 Protein Homology CDS 104452 105609 . - 0 ID=cds4202;Parent=gene4340;Dbxref=Genbank:WP_011988600.1;Name=WP_011988600.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_011988600.1;transl_table=11 NC_009705.1 RefSeq gene 106464 107120 . + . ID=gene4341;Name=YPSIP31758_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00905;old_locus_tag=YpsIP31758_B0095 NC_009705.1 Protein Homology CDS 106464 107120 . + 0 ID=cds4203;Parent=gene4341;Dbxref=Genbank:WP_049756373.1;Name=WP_049756373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756373.1;transl_table=11 NC_009705.1 RefSeq gene 107209 107700 . + . ID=gene4342;Name=YPSIP31758_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00910;old_locus_tag=YpsIP31758_B0096 NC_009705.1 GeneMarkS+ CDS 107209 107700 . + 0 ID=cds4204;Parent=gene4342;Dbxref=Genbank:WP_011988495.1;Name=WP_011988495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988495.1;transl_table=11 NC_009705.1 RefSeq gene 107749 110271 . - . ID=gene4343;Name=YPSIP31758_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00915;old_locus_tag=YpsIP31758_B0097 NC_009705.1 Protein Homology CDS 107749 110271 . - 0 ID=cds4205;Parent=gene4343;Dbxref=Genbank:WP_011988570.1;Name=WP_011988570.1;gbkey=CDS;product=type IV secretion system protein DotA-like protein;protein_id=WP_011988570.1;transl_table=11 NC_009705.1 RefSeq gene 110517 111107 . + . ID=gene4344;Name=YPSIP31758_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00920;old_locus_tag=YpsIP31758_B0098 NC_009705.1 GeneMarkS+ CDS 110517 111107 . + 0 ID=cds4206;Parent=gene4344;Dbxref=Genbank:WP_041175664.1;Name=WP_041175664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175664.1;transl_table=11 NC_009705.1 RefSeq gene 111116 111469 . + . ID=gene4345;Name=YPSIP31758_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00925 NC_009705.1 Protein Homology CDS 111116 111469 . + 0 ID=cds4207;Parent=gene4345;Dbxref=Genbank:WP_041175665.1;Name=WP_041175665.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175665.1;transl_table=11 NC_009705.1 RefSeq gene 111501 112385 . - . ID=gene4346;Name=YPSIP31758_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00930;old_locus_tag=YpsIP31758_B0099 NC_009705.1 Protein Homology CDS 111501 112385 . - 0 ID=cds4208;Parent=gene4346;Dbxref=Genbank:WP_011988547.1;Name=WP_011988547.1;gbkey=CDS;product=lipoprotein;protein_id=WP_011988547.1;transl_table=11 NC_009705.1 RefSeq gene 112397 112963 . - . ID=gene4347;Name=YPSIP31758_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00935 NC_009705.1 Protein Homology CDS 112397 112963 . - 0 ID=cds4209;Parent=gene4347;Dbxref=Genbank:WP_011988583.1;Name=WP_011988583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988583.1;transl_table=11 NC_009705.1 RefSeq gene 112978 113796 . - . ID=gene4348;Name=YPSIP31758_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00940;old_locus_tag=YpsIP31758_B0101 NC_009705.1 GeneMarkS+ CDS 112978 113796 . - 0 ID=cds4210;Parent=gene4348;Dbxref=Genbank:WP_011988478.1;Name=WP_011988478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988478.1;transl_table=11 NC_009705.1 RefSeq gene 113765 114031 . - . ID=gene4349;Name=YPSIP31758_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00945 NC_009705.1 GeneMarkS+ CDS 113765 114031 . - 0 ID=cds4211;Parent=gene4349;Dbxref=Genbank:WP_041175666.1;Name=WP_041175666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175666.1;transl_table=11 NC_009705.1 RefSeq gene 114028 114951 . - . ID=gene4350;Name=YPSIP31758_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00950;old_locus_tag=YpsIP31758_B0102 NC_009705.1 GeneMarkS+ CDS 114028 114951 . - 0 ID=cds4212;Parent=gene4350;Dbxref=Genbank:WP_011988551.1;Name=WP_011988551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988551.1;transl_table=11 NC_009705.1 RefSeq gene 114952 115953 . - . ID=gene4351;Name=YPSIP31758_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00955;old_locus_tag=YpsIP31758_B0103 NC_009705.1 Protein Homology CDS 114952 115953 . - 0 ID=cds4213;Parent=gene4351;Dbxref=Genbank:WP_049756374.1;Name=WP_049756374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756374.1;transl_table=11 NC_009705.1 RefSeq gene 115982 117295 . - . ID=gene4352;Name=YPSIP31758_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00960;old_locus_tag=YpsIP31758_B0104 NC_009705.1 Protein Homology CDS 115982 117295 . - 0 ID=cds4214;Parent=gene4352;Dbxref=Genbank:WP_011988578.1;Name=WP_011988578.1;gbkey=CDS;product=type IV secretion system protein IcmP/DotM;protein_id=WP_011988578.1;transl_table=11 NC_009705.1 RefSeq gene 117309 117902 . - . ID=gene4353;Name=YPSIP31758_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00965;old_locus_tag=YpsIP31758_B0105 NC_009705.1 GeneMarkS+ CDS 117309 117902 . - 0 ID=cds4215;Parent=gene4353;Dbxref=Genbank:WP_011988572.1;Name=WP_011988572.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988572.1;transl_table=11 NC_009705.1 RefSeq gene 117895 118083 . - . ID=gene4354;Name=YPSIP31758_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00970 NC_009705.1 GeneMarkS+ CDS 117895 118083 . - 0 ID=cds4216;Parent=gene4354;Dbxref=Genbank:WP_041175667.1;Name=WP_041175667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175667.1;transl_table=11 NC_009705.1 RefSeq gene 118095 119141 . - . ID=gene4355;Name=YPSIP31758_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00975;old_locus_tag=YpsIP31758_B0106 NC_009705.1 Protein Homology CDS 118095 119141 . - 0 ID=cds4217;Parent=gene4355;Dbxref=Genbank:WP_041175668.1;Name=WP_041175668.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175668.1;transl_table=11 NC_009705.1 RefSeq gene 119171 119446 . - . ID=gene4356;Name=YPSIP31758_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00980 NC_009705.1 Protein Homology CDS 119171 119446 . - 0 ID=cds4218;Parent=gene4356;Dbxref=Genbank:WP_041175669.1;Name=WP_041175669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175669.1;transl_table=11 NC_009705.1 RefSeq gene 120219 120518 . - . ID=gene4357;Name=YPSIP31758_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00985;old_locus_tag=YpsIP31758_B0107 NC_009705.1 Protein Homology CDS 120219 120518 . - 0 ID=cds4219;Parent=gene4357;Dbxref=Genbank:WP_011988603.1;Name=WP_011988603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988603.1;transl_table=11 NC_009705.1 RefSeq gene 120524 121153 . - . ID=gene4358;Name=YPSIP31758_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00990;old_locus_tag=YpsIP31758_B0108 NC_009705.1 Protein Homology CDS 120524 121153 . - 0 ID=cds4220;Parent=gene4358;Dbxref=Genbank:WP_011988518.1;Name=WP_011988518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988518.1;transl_table=11 NC_009705.1 RefSeq gene 121779 122942 . - . ID=gene4359;Name=YPSIP31758_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00995;old_locus_tag=YpsIP31758_B0110 NC_009705.1 Protein Homology CDS 121779 122942 . - 0 ID=cds4221;Parent=gene4359;Dbxref=Genbank:WP_011988542.1;Name=WP_011988542.1;gbkey=CDS;product=type IV secretion system protein DotB;protein_id=WP_011988542.1;transl_table=11 NC_009705.1 RefSeq gene 122942 123790 . - . ID=gene4360;Name=YPSIP31758_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01000;old_locus_tag=YpsIP31758_B0111 NC_009705.1 Protein Homology CDS 122942 123790 . - 0 ID=cds4222;Parent=gene4360;Dbxref=Genbank:WP_011988557.1;Name=WP_011988557.1;gbkey=CDS;product=type IV secretion system protein DotC;protein_id=WP_011988557.1;transl_table=11 NC_009705.1 RefSeq gene 123805 124260 . - . ID=gene4361;Name=YPSIP31758_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01005;old_locus_tag=YpsIP31758_B0112 NC_009705.1 Protein Homology CDS 123805 124260 . - 0 ID=cds4223;Parent=gene4361;Dbxref=Genbank:WP_011988519.1;Name=WP_011988519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988519.1;transl_table=11 NC_009705.1 RefSeq gene 125086 126216 . + . ID=gene4362;Name=YPSIP31758_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01010;old_locus_tag=YpsIP31758_B0113 NC_009705.1 Protein Homology CDS 125086 126216 . + 0 ID=cds4224;Parent=gene4362;Dbxref=Genbank:WP_041175670.1;Name=WP_041175670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175670.1;transl_table=11 NC_009705.1 RefSeq gene 126318 126584 . + . ID=gene4363;Name=YPSIP31758_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01015 NC_009705.1 Protein Homology CDS 126318 126584 . + 0 ID=cds4225;Parent=gene4363;Dbxref=Genbank:WP_041175671.1;Name=WP_041175671.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175671.1;transl_table=11 NC_009705.1 RefSeq gene 126646 127365 . + . ID=gene4364;Name=YPSIP31758_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01020;old_locus_tag=YpsIP31758_B0114 NC_009705.1 Protein Homology CDS 126646 127365 . + 0 ID=cds4226;Parent=gene4364;Dbxref=Genbank:WP_041175708.1;Name=WP_041175708.1;gbkey=CDS;product=type IV secretion protein DotI;protein_id=WP_041175708.1;transl_table=11 NC_009705.1 RefSeq gene 127367 128452 . + . ID=gene4365;Name=YPSIP31758_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01025;old_locus_tag=YpsIP31758_B0115 NC_009705.1 Protein Homology CDS 127367 128452 . + 0 ID=cds4227;Parent=gene4365;Dbxref=Genbank:WP_011988506.1;Name=WP_011988506.1;gbkey=CDS;product=putative type IV secretion system protein IcmK/DotH;protein_id=WP_011988506.1;transl_table=11 NC_009705.1 RefSeq gene 128505 129893 . + . ID=gene4366;Name=YPSIP31758_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01030;old_locus_tag=YpsIP31758_B0116 NC_009705.1 Protein Homology CDS 128505 129893 . + 0 ID=cds4228;Parent=gene4366;Dbxref=Genbank:WP_011988488.1;Name=WP_011988488.1;gbkey=CDS;product=type IV secretion system protein IcmE/DotG;protein_id=WP_011988488.1;transl_table=11 NC_009705.1 RefSeq gene 129904 130590 . + . ID=gene4367;Name=YPSIP31758_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01035;old_locus_tag=YpsIP31758_B0117 NC_009705.1 GeneMarkS+ CDS 129904 130590 . + 0 ID=cds4229;Parent=gene4367;Dbxref=Genbank:WP_011988529.1;Name=WP_011988529.1;gbkey=CDS;product=type IV secretion system protein IcmG/DotF;protein_id=WP_011988529.1;transl_table=11 NC_009705.1 RefSeq gene 130601 131182 . + . ID=gene4368;Name=YPSIP31758_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01040;old_locus_tag=YpsIP31758_B0118 NC_009705.1 Protein Homology CDS 130601 131182 . + 0 ID=cds4230;Parent=gene4368;Dbxref=Genbank:WP_011988591.1;Name=WP_011988591.1;gbkey=CDS;product=type IV secretion system protein IcmC/DotIE;protein_id=WP_011988591.1;transl_table=11 NC_009705.1 RefSeq gene 131243 131617 . + . ID=gene4369;Name=YPSIP31758_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01045 NC_009705.1 Protein Homology CDS 131243 131617 . + 0 ID=cds4231;Parent=gene4369;Dbxref=Genbank:WP_041175672.1;Name=WP_041175672.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175672.1;transl_table=11 NC_009705.1 RefSeq gene 131682 132401 . + . ID=gene4370;Name=YPSIP31758_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01050;old_locus_tag=YpsIP31758_B0119 NC_009705.1 Protein Homology CDS 131682 132401 . + 0 ID=cds4232;Parent=gene4370;Dbxref=Genbank:WP_011988555.1;Name=WP_011988555.1;gbkey=CDS;product=putative type IV secretion system protein IcmJ/DotN;protein_id=WP_011988555.1;transl_table=11 NC_009705.1 RefSeq gene 132432 133607 . + . ID=gene4371;Name=YPSIP31758_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01055;old_locus_tag=YpsIP31758_B0120 NC_009705.1 Protein Homology CDS 132432 133607 . + 0 ID=cds4233;Parent=gene4371;Dbxref=Genbank:WP_049756375.1;Name=WP_049756375.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756375.1;transl_table=11 NC_009705.1 RefSeq gene 133805 136900 . + . ID=gene4372;Name=YPSIP31758_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01060;old_locus_tag=YpsIP31758_B0121 NC_009705.1 Protein Homology CDS 133805 136900 . + 0 ID=cds4234;Parent=gene4372;Dbxref=Genbank:WP_011988571.1;Name=WP_011988571.1;gbkey=CDS;product=type IV secretion system protein IcmB/DotO;protein_id=WP_011988571.1;transl_table=11 NC_009705.1 RefSeq gene 136944 139748 . + . ID=gene4373;Name=YPSIP31758_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01065 NC_009705.1 Protein Homology CDS 136944 139748 . + 0 ID=cds4235;Parent=gene4373;Dbxref=Genbank:WP_011988611.1;Name=WP_011988611.1;gbkey=CDS;product=putative type IV secretion system protein IcmO/DotL;protein_id=WP_011988611.1;transl_table=11 NC_009705.1 RefSeq gene 139846 140271 . + . ID=gene4374;Name=YPSIP31758_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01070;old_locus_tag=YpsIP31758_B0123 NC_009705.1 Protein Homology CDS 139846 140271 . + 0 ID=cds4236;Parent=gene4374;Dbxref=Genbank:WP_011988494.1;Name=WP_011988494.1;gbkey=CDS;product=DNA-binding protein H-NS;protein_id=WP_011988494.1;transl_table=11 NC_009705.1 RefSeq gene 140366 140995 . + . ID=gene4375;Name=YPSIP31758_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01075;old_locus_tag=YpsIP31758_B0124 NC_009705.1 Protein Homology CDS 140366 140995 . + 0 ID=cds4237;Parent=gene4375;Dbxref=Genbank:WP_011988510.1;Name=WP_011988510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988510.1;transl_table=11 NC_009705.1 RefSeq gene 141048 141527 . + . ID=gene4376;Name=YPSIP31758_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01080;old_locus_tag=YpsIP31758_B0125 NC_009705.1 Protein Homology CDS 141048 141527 . + 0 ID=cds4238;Parent=gene4376;Dbxref=Genbank:WP_011988592.1;Name=WP_011988592.1;gbkey=CDS;product=conjugal transfer protein TrbN;protein_id=WP_011988592.1;transl_table=11 NC_009705.1 RefSeq gene 141546 142061 . + . ID=gene4377;Name=YPSIP31758_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01085;old_locus_tag=YpsIP31758_B0126 NC_009705.1 Protein Homology CDS 141546 142061 . + 0 ID=cds4239;Parent=gene4377;Dbxref=Genbank:WP_011988548.1;Name=WP_011988548.1;gbkey=CDS;product=ssDNA-binding protein;protein_id=WP_011988548.1;transl_table=11 NC_009705.1 RefSeq gene 142252 142614 . + . ID=gene4378;Name=YPSIP31758_RS01090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPSIP31758_RS01090;partial=true;pseudo=true;start_range=.,142252 NC_009705.1 Protein Homology CDS 142252 142614 . + 0 ID=cds4240;Parent=gene4378;gbkey=CDS;partial=true;product=serine recombinase;pseudo=true;start_range=.,142252;transl_except=(pos:142399..142401%2Caa:Other);transl_table=11 NC_009705.1 RefSeq gene 142931 143110 . + . ID=gene4379;Name=YPSIP31758_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01095 NC_009705.1 GeneMarkS+ CDS 142931 143110 . + 0 ID=cds4241;Parent=gene4379;Dbxref=Genbank:WP_041175673.1;Name=WP_041175673.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175673.1;transl_table=11 NC_009705.1 RefSeq gene 143153 143992 . + . ID=gene4380;Name=YPSIP31758_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01100;old_locus_tag=YpsIP31758_B0128 NC_009705.1 Protein Homology CDS 143153 143992 . + 0 ID=cds4242;Parent=gene4380;Dbxref=Genbank:WP_011988498.1;Name=WP_011988498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988498.1;transl_table=11 NC_009705.1 RefSeq gene 144109 144429 . - . ID=gene4381;Name=YPSIP31758_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01105 NC_009705.1 GeneMarkS+ CDS 144109 144429 . - 0 ID=cds4243;Parent=gene4381;Dbxref=Genbank:WP_041175674.1;Name=WP_041175674.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175674.1;transl_table=11 NC_009705.1 RefSeq gene 144749 145591 . + . ID=gene4382;Name=YPSIP31758_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01110;old_locus_tag=YpsIP31758_B0129 NC_009705.1 Protein Homology CDS 144749 145591 . + 0 ID=cds4244;Parent=gene4382;Dbxref=Genbank:WP_011988533.1;Name=WP_011988533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988533.1;transl_table=11 NC_009705.1 RefSeq gene 146642 146995 . + . ID=gene4383;Name=YPSIP31758_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01115;old_locus_tag=YpsIP31758_B0132 NC_009705.1 GeneMarkS+ CDS 146642 146995 . + 0 ID=cds4245;Parent=gene4383;Dbxref=Genbank:WP_041175675.1;Name=WP_041175675.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175675.1;transl_table=11 NC_009705.1 RefSeq gene 147016 147396 . + . ID=gene4384;Name=YPSIP31758_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01120;old_locus_tag=YpsIP31758_B0133 NC_009705.1 GeneMarkS+ CDS 147016 147396 . + 0 ID=cds4246;Parent=gene4384;Dbxref=Genbank:WP_011988537.1;Name=WP_011988537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988537.1;transl_table=11 NC_009705.1 RefSeq gene 147539 147979 . - . ID=gene4385;Name=YPSIP31758_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01125;old_locus_tag=YpsIP31758_B0134 NC_009705.1 Protein Homology CDS 147539 147979 . - 0 ID=cds4247;Parent=gene4385;Dbxref=Genbank:WP_011988580.1;Name=WP_011988580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988580.1;transl_table=11 NC_009705.1 RefSeq gene 149327 149560 . + . ID=gene4386;Name=YPSIP31758_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01130;old_locus_tag=YpsIP31758_B0135 NC_009705.1 GeneMarkS+ CDS 149327 149560 . + 0 ID=cds4248;Parent=gene4386;Dbxref=Genbank:WP_041175676.1;Name=WP_041175676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175676.1;transl_table=11 NC_009705.1 RefSeq gene 150705 151715 . + . ID=gene4387;Name=YPSIP31758_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01135;old_locus_tag=YpsIP31758_B0136 NC_009705.1 Protein Homology CDS 150705 151715 . + 0 ID=cds4249;Parent=gene4387;Dbxref=Genbank:WP_049756376.1;Name=WP_049756376.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756376.1;transl_table=11 NC_009705.1 RefSeq gene 151696 153015 . - . ID=gene4388;Name=YPSIP31758_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS01140;old_locus_tag=YpsIP31758_B0001 NC_009705.1 GeneMarkS+ CDS 151696 153015 . - 0 ID=cds4250;Parent=gene4388;Dbxref=Genbank:WP_011988541.1;Name=WP_011988541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988541.1;transl_table=11 ##sequence-region NC_009704.1 1 58679 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=349747 NC_009704.1 RefSeq region 1 58679 . + . ID=id369;Dbxref=taxon:349747;Is_circular=true;Name=plasmid_59kb;collection-date=1966;gbkey=Src;genome=plasmid;isolation-source=stool of a patient presenting with scarlet-like fever in the Primorski region of the former USSR%3B in 1971 sent to the Institut Pasteur (Paris%2C France) by Dr. Timofeeva (Antiplague Institute%2C Irkoutsk);mol_type=genomic DNA;plasmid-name=plasmid_59kb;serotype=O:1b;strain=IP 31758 NC_009704.1 RefSeq gene 519 1556 . - . ID=gene4389;Name=YPSIP31758_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00005;old_locus_tag=YpsIP31758_A0041 NC_009704.1 Protein Homology CDS 519 1556 . - 0 ID=cds4251;Parent=gene4389;Dbxref=Genbank:WP_011988441.1;Name=WP_011988441.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988441.1;transl_table=11 NC_009704.1 RefSeq gene 1836 2138 . - . ID=gene4390;Name=YPSIP31758_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00010;old_locus_tag=YpsIP31758_A0042 NC_009704.1 Protein Homology CDS 1836 2138 . - 0 ID=cds4252;Parent=gene4390;Dbxref=Genbank:WP_011988449.1;Name=WP_011988449.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_011988449.1;transl_table=11 NC_009704.1 RefSeq gene 2126 2416 . - . ID=gene4391;Name=YPSIP31758_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00015;old_locus_tag=YpsIP31758_A0043 NC_009704.1 Protein Homology CDS 2126 2416 . - 0 ID=cds4253;Parent=gene4391;Dbxref=Genbank:WP_011988472.1;Name=WP_011988472.1;gbkey=CDS;product=CopG family transcriptional regulator;protein_id=WP_011988472.1;transl_table=11 NC_009704.1 RefSeq gene 3354 3548 . - . ID=gene4392;Name=YPSIP31758_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00020 NC_009704.1 GeneMarkS+ CDS 3354 3548 . - 0 ID=cds4254;Parent=gene4392;Dbxref=Genbank:WP_041175615.1;Name=WP_041175615.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175615.1;transl_table=11 NC_009704.1 RefSeq gene 3928 4839 . - . ID=gene4393;Name=YPSIP31758_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22360;old_locus_tag=YpsIP31758_A0045 NC_009704.1 Protein Homology CDS 3928 4839 . - 0 ID=cds4255;Parent=gene4393;Dbxref=Genbank:WP_011988417.1;Name=WP_011988417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988417.1;transl_table=11 NC_009704.1 RefSeq gene 4836 5057 . - . ID=gene4394;Name=YPSIP31758_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00030 NC_009704.1 GeneMarkS+ CDS 4836 5057 . - 0 ID=cds4256;Parent=gene4394;Dbxref=Genbank:WP_041175616.1;Name=WP_041175616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175616.1;transl_table=11 NC_009704.1 RefSeq gene 5634 6002 . + . ID=gene4395;Name=YPSIP31758_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00035;old_locus_tag=YpsIP31758_A0046 NC_009704.1 Protein Homology CDS 5634 6002 . + 0 ID=cds4257;Parent=gene4395;Dbxref=Genbank:WP_011988477.1;Name=WP_011988477.1;Note=TrbA repressor;gbkey=CDS;product=conjugal transfer protein TrbA;protein_id=WP_011988477.1;transl_table=11 NC_009704.1 RefSeq gene 6161 7120 . + . ID=gene4396;Name=YPSIP31758_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00040;old_locus_tag=YpsIP31758_A0047 NC_009704.1 Protein Homology CDS 6161 7120 . + 0 ID=cds4258;Parent=gene4396;Dbxref=Genbank:WP_041175630.1;Name=WP_041175630.1;gbkey=CDS;product=conjugal transfer protein TrbB;protein_id=WP_041175630.1;transl_table=11 NC_009704.1 RefSeq gene 7133 7513 . + . ID=gene4397;Name=YPSIP31758_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00045;old_locus_tag=YpsIP31758_A0048 NC_009704.1 Protein Homology CDS 7133 7513 . + 0 ID=cds4259;Parent=gene4397;Dbxref=Genbank:WP_011988438.1;Name=WP_011988438.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_011988438.1;transl_table=11 NC_009704.1 RefSeq gene 7516 7830 . + . ID=gene4398;Name=YPSIP31758_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00050;old_locus_tag=YpsIP31758_A0049 NC_009704.1 Protein Homology CDS 7516 7830 . + 0 ID=cds4260;Parent=gene4398;Dbxref=Genbank:WP_011988450.1;Name=WP_011988450.1;gbkey=CDS;product=conjugal transfer protein TrbD;protein_id=WP_011988450.1;transl_table=11 NC_009704.1 RefSeq gene 7823 10360 . + . ID=gene4399;Name=YPSIP31758_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00055;old_locus_tag=YpsIP31758_A0050 NC_009704.1 Protein Homology CDS 7823 10360 . + 0 ID=cds4261;Parent=gene4399;Dbxref=Genbank:WP_011988420.1;Name=WP_011988420.1;Note=type IV secretion system ATPase VirB4 family;gbkey=CDS;product=conjugal transfer protein TrbE;protein_id=WP_011988420.1;transl_table=11 NC_009704.1 RefSeq gene 10357 11079 . + . ID=gene4400;Name=YPSIP31758_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00060;old_locus_tag=YpsIP31758_A0051 NC_009704.1 Protein Homology CDS 10357 11079 . + 0 ID=cds4262;Parent=gene4400;Dbxref=Genbank:WP_011988424.1;Name=WP_011988424.1;gbkey=CDS;product=conjugal transfer protein TrbF;protein_id=WP_011988424.1;transl_table=11 NC_009704.1 RefSeq gene 11094 11981 . + . ID=gene4401;Name=YPSIP31758_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00065;old_locus_tag=YpsIP31758_A0052 NC_009704.1 Protein Homology CDS 11094 11981 . + 0 ID=cds4263;Parent=gene4401;Dbxref=Genbank:WP_011988419.1;Name=WP_011988419.1;Note=type IV secretion system VirB9/CagX family;gbkey=CDS;product=conjugal transfer protein TrbG;protein_id=WP_011988419.1;transl_table=11 NC_009704.1 RefSeq gene 11984 12433 . + . ID=gene4402;Name=YPSIP31758_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00070;old_locus_tag=YpsIP31758_A0053 NC_009704.1 Protein Homology CDS 11984 12433 . + 0 ID=cds4264;Parent=gene4402;Dbxref=Genbank:WP_011988468.1;Name=WP_011988468.1;gbkey=CDS;product=conjugal transfer protein TrbH;protein_id=WP_011988468.1;transl_table=11 NC_009704.1 RefSeq gene 12438 13817 . + . ID=gene4403;Name=YPSIP31758_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00075;old_locus_tag=YpsIP31758_A0054 NC_009704.1 Protein Homology CDS 12438 13817 . + 0 ID=cds4265;Parent=gene4403;Dbxref=Genbank:WP_011988463.1;Name=WP_011988463.1;gbkey=CDS;product=conjugal transfer protein TrbI;protein_id=WP_011988463.1;transl_table=11 NC_009704.1 RefSeq gene 13835 14611 . + . ID=gene4404;Name=YPSIP31758_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00080;old_locus_tag=YpsIP31758_A0055 NC_009704.1 Protein Homology CDS 13835 14611 . + 0 ID=cds4266;Parent=gene4404;Dbxref=Genbank:WP_011988458.1;Name=WP_011988458.1;gbkey=CDS;product=conjugal transfer protein TrbJ;protein_id=WP_011988458.1;transl_table=11 NC_009704.1 RefSeq gene 14626 14826 . + . ID=gene4405;Name=YPSIP31758_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00085 NC_009704.1 GeneMarkS+ CDS 14626 14826 . + 0 ID=cds4267;Parent=gene4405;Dbxref=Genbank:WP_041175617.1;Name=WP_041175617.1;gbkey=CDS;product=entry exclusion lipoprotein TrbK;protein_id=WP_041175617.1;transl_table=11 NC_009704.1 RefSeq gene 14831 16195 . + . ID=gene4406;Name=YPSIP31758_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00090;old_locus_tag=YpsIP31758_A0056 NC_009704.1 Protein Homology CDS 14831 16195 . + 0 ID=cds4268;Parent=gene4406;Dbxref=Genbank:WP_041175618.1;Name=WP_041175618.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_041175618.1;transl_table=11 NC_009704.1 RefSeq gene 16248 16868 . + . ID=gene4407;Name=YPSIP31758_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00095;old_locus_tag=YpsIP31758_A0057 NC_009704.1 Protein Homology CDS 16248 16868 . + 0 ID=cds4269;Parent=gene4407;Dbxref=Genbank:WP_011988436.1;Name=WP_011988436.1;gbkey=CDS;product=conjugal transfer protein TrbN;protein_id=WP_011988436.1;transl_table=11 NC_009704.1 RefSeq gene 16987 17466 . + . ID=gene4408;Name=YPSIP31758_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS22365;old_locus_tag=YpsIP31758_A0058 NC_009704.1 Protein Homology CDS 16987 17466 . + 0 ID=cds4270;Parent=gene4408;Dbxref=Genbank:WP_011988473.1;Name=WP_011988473.1;gbkey=CDS;product=transcriptional activator;protein_id=WP_011988473.1;transl_table=11 NC_009704.1 RefSeq gene 17489 18421 . + . ID=gene4409;Name=YPSIP31758_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00105;old_locus_tag=YpsIP31758_A0059 NC_009704.1 Protein Homology CDS 17489 18421 . + 0 ID=cds4271;Parent=gene4409;Dbxref=Genbank:WP_011988422.1;Name=WP_011988422.1;gbkey=CDS;product=secretion system protein PilL;protein_id=WP_011988422.1;transl_table=11 NC_009704.1 RefSeq gene 18434 20140 . + . ID=gene4410;Name=YPSIP31758_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00110;old_locus_tag=YpsIP31758_A0060 NC_009704.1 Protein Homology CDS 18434 20140 . + 0 ID=cds4272;Parent=gene4410;Dbxref=Genbank:WP_011988414.1;Name=WP_011988414.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_011988414.1;transl_table=11 NC_009704.1 RefSeq gene 20150 21484 . + . ID=gene4411;Name=YPSIP31758_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00115;old_locus_tag=YpsIP31758_A0061 NC_009704.1 Protein Homology CDS 20150 21484 . + 0 ID=cds4273;Parent=gene4411;Dbxref=Genbank:WP_011988426.1;Name=WP_011988426.1;gbkey=CDS;product=type IV secretion system protein PilO2;protein_id=WP_011988426.1;transl_table=11 NC_009704.1 RefSeq gene 21471 21914 . + . ID=gene4412;Name=YPSIP31758_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00120;old_locus_tag=YpsIP31758_A0062 NC_009704.1 Protein Homology CDS 21471 21914 . + 0 ID=cds4274;Parent=gene4412;Dbxref=Genbank:WP_011988448.1;Name=WP_011988448.1;gbkey=CDS;product=type IV pilus biogenesis/secretion protein PilP;protein_id=WP_011988448.1;transl_table=11 NC_009704.1 RefSeq gene 21911 23443 . + . ID=gene4413;Name=YPSIP31758_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00125;old_locus_tag=YpsIP31758_A0063 NC_009704.1 Protein Homology CDS 21911 23443 . + 0 ID=cds4275;Parent=gene4413;Dbxref=Genbank:WP_011988476.1;Name=WP_011988476.1;gbkey=CDS;product=type IV secretion system protein PilQ;protein_id=WP_011988476.1;transl_table=11 NC_009704.1 RefSeq gene 23436 24500 . + . ID=gene4414;Name=YPSIP31758_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00130;old_locus_tag=YpsIP31758_A0064 NC_009704.1 Protein Homology CDS 23436 24500 . + 0 ID=cds4276;Parent=gene4414;Dbxref=Genbank:WP_011988432.1;Name=WP_011988432.1;gbkey=CDS;product=type IV secretion system protein PilR;protein_id=WP_011988432.1;transl_table=11 NC_009704.1 RefSeq gene 24517 25023 . + . ID=gene4415;Name=YPSIP31758_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00135;old_locus_tag=YpsIP31758_A0065 NC_009704.1 Protein Homology CDS 24517 25023 . + 0 ID=cds4277;Parent=gene4415;Dbxref=Genbank:WP_011988430.1;Name=WP_011988430.1;gbkey=CDS;product=type IV secretion system protein PilS2;protein_id=WP_011988430.1;transl_table=11 NC_009704.1 RefSeq gene 25039 25992 . + . ID=gene4416;Name=YPSIP31758_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00140;old_locus_tag=YpsIP31758_A0066 NC_009704.1 Protein Homology CDS 25039 25992 . + 0 ID=cds4278;Parent=gene4416;Dbxref=Genbank:WP_011988446.1;Name=WP_011988446.1;gbkey=CDS;product=type IV secretion system protein;protein_id=WP_011988446.1;transl_table=11 NC_009704.1 RefSeq gene 26005 27261 . + . ID=gene4417;Name=YPSIP31758_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00145;old_locus_tag=YpsIP31758_A0001 NC_009704.1 Protein Homology CDS 26005 27261 . + 0 ID=cds4279;Parent=gene4417;Dbxref=Genbank:WP_011988423.1;Name=WP_011988423.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988423.1;transl_table=11 NC_009704.1 RefSeq gene 27495 27896 . + . ID=gene4418;Name=YPSIP31758_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00150;old_locus_tag=YpsIP31758_A0002 NC_009704.1 GeneMarkS+ CDS 27495 27896 . + 0 ID=cds4280;Parent=gene4418;Dbxref=Genbank:WP_011988421.1;Name=WP_011988421.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988421.1;transl_table=11 NC_009704.1 RefSeq gene 27919 28332 . + . ID=gene4419;Name=YPSIP31758_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00155;old_locus_tag=YpsIP31758_A0003 NC_009704.1 Protein Homology CDS 27919 28332 . + 0 ID=cds4281;Parent=gene4419;Dbxref=Genbank:WP_049756366.1;Name=WP_049756366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756366.1;transl_table=11 NC_009704.1 RefSeq gene 28344 28967 . + . ID=gene4420;Name=YPSIP31758_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00160;old_locus_tag=YpsIP31758_A0004 NC_009704.1 Protein Homology CDS 28344 28967 . + 0 ID=cds4282;Parent=gene4420;Dbxref=Genbank:WP_011988455.1;Name=WP_011988455.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988455.1;transl_table=11 NC_009704.1 RefSeq gene 28986 29492 . + . ID=gene4421;Name=YPSIP31758_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00165;old_locus_tag=YpsIP31758_A0005 NC_009704.1 Protein Homology CDS 28986 29492 . + 0 ID=cds4283;Parent=gene4421;Dbxref=Genbank:WP_011988434.1;Name=WP_011988434.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_011988434.1;transl_table=11 NC_009704.1 RefSeq gene 29517 30002 . + . ID=gene4422;Name=YPSIP31758_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00170;old_locus_tag=YpsIP31758_A0006 NC_009704.1 GeneMarkS+ CDS 29517 30002 . + 0 ID=cds4284;Parent=gene4422;Dbxref=Genbank:WP_011988460.1;Name=WP_011988460.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988460.1;transl_table=11 NC_009704.1 RefSeq gene 30036 30335 . + . ID=gene4423;Name=YPSIP31758_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00175;old_locus_tag=YpsIP31758_A0007 NC_009704.1 Protein Homology CDS 30036 30335 . + 0 ID=cds4285;Parent=gene4423;Dbxref=Genbank:WP_011988453.1;Name=WP_011988453.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988453.1;transl_table=11 NC_009704.1 RefSeq gene 30468 30716 . + . ID=gene4424;Name=YPSIP31758_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00180;old_locus_tag=YpsIP31758_A0008 NC_009704.1 GeneMarkS+ CDS 30468 30716 . + 0 ID=cds4286;Parent=gene4424;Dbxref=Genbank:WP_011988456.1;Name=WP_011988456.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988456.1;transl_table=11 NC_009704.1 RefSeq gene 30797 31144 . + . ID=gene4425;Name=YPSIP31758_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00185;old_locus_tag=YpsIP31758_A0009 NC_009704.1 Protein Homology CDS 30797 31144 . + 0 ID=cds4287;Parent=gene4425;Dbxref=Genbank:WP_011988418.1;Name=WP_011988418.1;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_011988418.1;transl_table=11 NC_009704.1 RefSeq repeat_region 31149 31363 . + . ID=id370;gbkey=repeat_region NC_009704.1 RefSeq gene 31794 31994 . - . ID=gene4426;Name=YPSIP31758_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00190 NC_009704.1 GeneMarkS+ CDS 31794 31994 . - 0 ID=cds4288;Parent=gene4426;Dbxref=Genbank:WP_041175619.1;Name=WP_041175619.1;gbkey=CDS;product=entry exclusion lipoprotein TrbK;protein_id=WP_041175619.1;transl_table=11 NC_009704.1 RefSeq gene 32134 32811 . - . ID=gene4427;Name=YPSIP31758_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00195;old_locus_tag=YpsIP31758_A0010 NC_009704.1 Protein Homology CDS 32134 32811 . - 0 ID=cds4289;Parent=gene4427;Dbxref=Genbank:WP_049756367.1;Name=WP_049756367.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756367.1;transl_table=11 NC_009704.1 RefSeq gene 33037 33261 . + . ID=gene4428;Name=YPSIP31758_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00200 NC_009704.1 GeneMarkS+ CDS 33037 33261 . + 0 ID=cds4290;Parent=gene4428;Dbxref=Genbank:WP_041175620.1;Name=WP_041175620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175620.1;transl_table=11 NC_009704.1 RefSeq gene 33378 33923 . + . ID=gene4429;Name=YPSIP31758_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00205;old_locus_tag=YpsIP31758_A0012 NC_009704.1 GeneMarkS+ CDS 33378 33923 . + 0 ID=cds4291;Parent=gene4429;Dbxref=Genbank:WP_011988474.1;Name=WP_011988474.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988474.1;transl_table=11 NC_009704.1 RefSeq gene 34388 34684 . + . ID=gene4430;Name=YPSIP31758_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00210;old_locus_tag=YpsIP31758_A0013 NC_009704.1 GeneMarkS+ CDS 34388 34684 . + 0 ID=cds4292;Parent=gene4430;Dbxref=Genbank:WP_041175621.1;Name=WP_041175621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175621.1;transl_table=11 NC_009704.1 RefSeq gene 34854 35048 . + . ID=gene4431;Name=YPSIP31758_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00215 NC_009704.1 Protein Homology CDS 34854 35048 . + 0 ID=cds4293;Parent=gene4431;Dbxref=Genbank:WP_041175622.1;Name=WP_041175622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175622.1;transl_table=11 NC_009704.1 RefSeq gene 35038 35337 . + . ID=gene4432;Name=YPSIP31758_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00220;old_locus_tag=YpsIP31758_A0014 NC_009704.1 GeneMarkS+ CDS 35038 35337 . + 0 ID=cds4294;Parent=gene4432;Dbxref=Genbank:WP_011988416.1;Name=WP_011988416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988416.1;transl_table=11 NC_009704.1 RefSeq gene 35407 35859 . + . ID=gene4433;Name=YPSIP31758_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00225;old_locus_tag=YpsIP31758_A0015 NC_009704.1 Protein Homology CDS 35407 35859 . + 0 ID=cds4295;Parent=gene4433;Dbxref=Genbank:WP_041175623.1;Name=WP_041175623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175623.1;transl_table=11 NC_009704.1 RefSeq gene 36026 36691 . - . ID=gene4434;Name=YPSIP31758_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00230 NC_009704.1 Protein Homology CDS 36026 36691 . - 0 ID=cds4296;Parent=gene4434;Dbxref=Genbank:WP_011988465.1;Name=WP_011988465.1;gbkey=CDS;product=surface exclusion protien;protein_id=WP_011988465.1;transl_table=11 NC_009704.1 RefSeq gene 36756 37538 . - . ID=gene4435;Name=YPSIP31758_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00235;old_locus_tag=YpsIP31758_A0017 NC_009704.1 Protein Homology CDS 36756 37538 . - 0 ID=cds4297;Parent=gene4435;Dbxref=Genbank:WP_011988454.1;Name=WP_011988454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988454.1;transl_table=11 NC_009704.1 RefSeq gene 37549 38232 . - . ID=gene4436;Name=YPSIP31758_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00240;old_locus_tag=YpsIP31758_A0018 NC_009704.1 Protein Homology CDS 37549 38232 . - 0 ID=cds4298;Parent=gene4436;Dbxref=Genbank:WP_041175624.1;Name=WP_041175624.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175624.1;transl_table=11 NC_009704.1 RefSeq gene 38600 39370 . + . ID=gene4437;Name=YPSIP31758_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00245;old_locus_tag=YpsIP31758_A0019 NC_009704.1 Protein Homology CDS 38600 39370 . + 0 ID=cds4299;Parent=gene4437;Dbxref=Genbank:WP_049756368.1;Name=WP_049756368.1;gbkey=CDS;product=resolvase;protein_id=WP_049756368.1;transl_table=11 NC_009704.1 RefSeq repeat_region 39407 39621 . + . ID=id371;gbkey=repeat_region NC_009704.1 RefSeq gene 39675 42635 . - . ID=gene4438;Name=YPSIP31758_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00250;old_locus_tag=YpsIP31758_A0020 NC_009704.1 Protein Homology CDS 39675 42635 . - 0 ID=cds4300;Parent=gene4438;Dbxref=Genbank:WP_011988431.1;Name=WP_011988431.1;gbkey=CDS;product=DNA primase;protein_id=WP_011988431.1;transl_table=11 NC_009704.1 RefSeq gene 42628 42861 . - . ID=gene4439;Name=YPSIP31758_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00255;old_locus_tag=YpsIP31758_A0022 NC_009704.1 Protein Homology CDS 42628 42861 . - 0 ID=cds4301;Parent=gene4439;Dbxref=Genbank:WP_011988433.1;Name=WP_011988433.1;gbkey=CDS;product=conjugal transfer protein TraD;protein_id=WP_011988433.1;transl_table=11 NC_009704.1 RefSeq gene 42867 44906 . - . ID=gene4440;Name=YPSIP31758_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00260;old_locus_tag=YpsIP31758_A0023 NC_009704.1 Protein Homology CDS 42867 44906 . - 0 ID=cds4302;Parent=gene4440;Dbxref=Genbank:WP_011988435.1;Name=WP_011988435.1;gbkey=CDS;product=DNA topoisomerase;protein_id=WP_011988435.1;transl_table=11 NC_009704.1 RefSeq gene 44942 45466 . - . ID=gene4441;Name=YPSIP31758_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00265;old_locus_tag=YpsIP31758_A0024 NC_009704.1 Protein Homology CDS 44942 45466 . - 0 ID=cds4303;Parent=gene4441;Dbxref=Genbank:WP_011988471.1;Name=WP_011988471.1;gbkey=CDS;product=conjugal transfer protein TraF;protein_id=WP_011988471.1;transl_table=11 NC_009704.1 RefSeq gene 45463 47400 . - . ID=gene4442;Name=YPSIP31758_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00270;old_locus_tag=YpsIP31758_A0025 NC_009704.1 Protein Homology CDS 45463 47400 . - 0 ID=cds4304;Parent=gene4442;Dbxref=Genbank:WP_011988415.1;Name=WP_011988415.1;Note=type IV secretion system VirD4 family;gbkey=CDS;product=conjugal transfer protein TraG;protein_id=WP_011988415.1;transl_table=11 NC_009704.1 RefSeq gene 47397 50018 . - . ID=gene4443;Name=YPSIP31758_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00275;old_locus_tag=YpsIP31758_A0026 NC_009704.1 Protein Homology CDS 47397 50018 . - 0 ID=cds4305;Parent=gene4443;Dbxref=Genbank:WP_011988462.1;Name=WP_011988462.1;gbkey=CDS;product=conjugal transfer relaxase TraI;protein_id=WP_011988462.1;transl_table=11 NC_009704.1 RefSeq gene 50056 50412 . - . ID=gene4444;Name=YPSIP31758_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00280;old_locus_tag=YpsIP31758_A0027 NC_009704.1 Protein Homology CDS 50056 50412 . - 0 ID=cds4306;Parent=gene4444;Dbxref=Genbank:WP_011988427.1;Name=WP_011988427.1;gbkey=CDS;product=conjugal transfer protein TrbJ;protein_id=WP_011988427.1;transl_table=11 NC_009704.1 RefSeq gene 50746 51123 . + . ID=gene4445;Name=YPSIP31758_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00285;old_locus_tag=YpsIP31758_A0029 NC_009704.1 Protein Homology CDS 50746 51123 . + 0 ID=cds4307;Parent=gene4445;Dbxref=Genbank:WP_011988429.1;Name=WP_011988429.1;gbkey=CDS;product=conjugal transfer protein TraK;protein_id=WP_011988429.1;transl_table=11 NC_009704.1 RefSeq gene 51135 51863 . + . ID=gene4446;Name=YPSIP31758_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00290;old_locus_tag=YpsIP31758_A0030 NC_009704.1 Protein Homology CDS 51135 51863 . + 0 ID=cds4308;Parent=gene4446;Dbxref=Genbank:WP_011988444.1;Name=WP_011988444.1;gbkey=CDS;product=conjugal transfer protein TraL;protein_id=WP_011988444.1;transl_table=11 NC_009704.1 RefSeq gene 51860 52300 . + . ID=gene4447;Name=YPSIP31758_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00295;old_locus_tag=YpsIP31758_A0031 NC_009704.1 Protein Homology CDS 51860 52300 . + 0 ID=cds4309;Parent=gene4447;Dbxref=Genbank:WP_011988443.1;Name=WP_011988443.1;gbkey=CDS;product=conjugal transfer protein TraM;protein_id=WP_011988443.1;transl_table=11 NC_009704.1 RefSeq gene 52464 53075 . - . ID=gene4448;Name=YPSIP31758_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00300 NC_009704.1 Protein Homology CDS 52464 53075 . - 0 ID=cds4310;Parent=gene4448;Dbxref=Genbank:WP_049756369.1;Name=WP_049756369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049756369.1;transl_table=11 NC_009704.1 RefSeq gene 53106 53456 . - . ID=gene4449;Name=YPSIP31758_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00305 NC_009704.1 Protein Homology CDS 53106 53456 . - 0 ID=cds4311;Parent=gene4449;Dbxref=Genbank:WP_041175625.1;Name=WP_041175625.1;gbkey=CDS;product=conjugal transfer protein TraO;protein_id=WP_041175625.1;transl_table=11 NC_009704.1 RefSeq gene 54303 54728 . + . ID=gene4450;Name=YPSIP31758_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00310;old_locus_tag=YpsIP31758_A0034 NC_009704.1 Protein Homology CDS 54303 54728 . + 0 ID=cds4312;Parent=gene4450;Dbxref=Genbank:WP_041175626.1;Name=WP_041175626.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175626.1;transl_table=11 NC_009704.1 RefSeq gene 54761 55000 . + . ID=gene4451;Name=YPSIP31758_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00315;old_locus_tag=YpsIP31758_A0035 NC_009704.1 Protein Homology CDS 54761 55000 . + 0 ID=cds4313;Parent=gene4451;Dbxref=Genbank:WP_011988467.1;Name=WP_011988467.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988467.1;transl_table=11 NC_009704.1 RefSeq gene 55088 55408 . - . ID=gene4452;Name=YPSIP31758_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00320;old_locus_tag=YpsIP31758_A0036 NC_009704.1 Protein Homology CDS 55088 55408 . - 0 ID=cds4314;Parent=gene4452;Dbxref=Genbank:WP_011988470.1;Name=WP_011988470.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011988470.1;transl_table=11 NC_009704.1 RefSeq gene 55522 56574 . - . ID=gene4453;Name=YPSIP31758_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00325;old_locus_tag=YpsIP31758_A0037 NC_009704.1 Protein Homology CDS 55522 56574 . - 0 ID=cds4315;Parent=gene4453;Dbxref=Genbank:WP_011988428.1;Name=WP_011988428.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_011988428.1;transl_table=11 NC_009704.1 RefSeq gene 56571 57341 . - . ID=gene4454;Name=YPSIP31758_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00330 NC_009704.1 Protein Homology CDS 56571 57341 . - 0 ID=cds4316;Parent=gene4454;Dbxref=Genbank:WP_041175627.1;Name=WP_041175627.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_041175627.1;transl_table=11 NC_009704.1 RefSeq gene 57338 57643 . - . ID=gene4455;Name=YPSIP31758_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00335 NC_009704.1 Protein Homology CDS 57338 57643 . - 0 ID=cds4317;Parent=gene4455;Dbxref=Genbank:WP_041175628.1;Name=WP_041175628.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_041175628.1;transl_table=11 NC_009704.1 RefSeq gene 57838 58155 . - . ID=gene4456;Name=YPSIP31758_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPSIP31758_RS00340;old_locus_tag=YpsIP31758_A0040 NC_009704.1 Protein Homology CDS 57838 58155 . - 0 ID=cds4318;Parent=gene4456;Dbxref=Genbank:WP_011988475.1;Name=WP_011988475.1;gbkey=CDS;product=protein kleE;protein_id=WP_011988475.1;transl_table=11 ###