YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF100920 384 540 1.96E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF100934 535 608 3.73E-6 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Pfam PF00012 Hsp70 protein 4 602 1.9E-265 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF53067 4 183 9.39E-66 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.915 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 319 361 2.8E-33 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 197 229 2.8E-33 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.5E-291 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:1.20.1270.10 532 601 7.5E-27 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:2.60.34.10 390 531 7.3E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.90.640.10 230 315 6.3E-32 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF53067 187 382 8.43E-68 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.30.30 53 108 2.4E-27 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 119 196 1.1E-63 T 22-04-2016 YPTB_RS03440 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 4 52 1.1E-63 T 22-04-2016 YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 SUPERFAMILY SSF56176 439 521 6.82E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 Gene3D G3DSA:3.30.465.10 436 519 9.9E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 Gene3D G3DSA:3.10.580.10 290 426 6.0E-16 T 22-04-2016 YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 PANTHER PTHR22777 1 528 0.0 T 22-04-2016 YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF00571 CBS domain 304 360 0.0012 T 22-04-2016 IPR000644 CBS domain YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF00571 CBS domain 375 424 2.7E-6 T 22-04-2016 IPR000644 CBS domain YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 SMART SM01091 441 520 4.8E-26 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 PANTHER PTHR22777:SF14 1 528 0.0 T 22-04-2016 YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF03741 Integral membrane protein TerC family 15 203 1.0E-49 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF03471 Transporter associated domain 442 519 5.1E-18 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS08465 86df7ff4dac20d39d32d130d13d08661 528 SUPERFAMILY SSF54631 292 426 5.43E-25 T 22-04-2016 YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 Pfam PF03472 Autoinducer binding domain 13 157 1.0E-28 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 Gene3D G3DSA:3.30.450.80 2 184 2.4E-41 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 SMART SM00421 179 236 1.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 SUPERFAMILY SSF46894 178 242 7.14E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 SUPERFAMILY SSF75516 2 162 4.18E-36 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 Gene3D G3DSA:1.10.10.10 185 242 9.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13580 b412f76fb45737753ea47e0cc45c66fb 245 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 235 2.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 Gene3D G3DSA:3.40.140.10 139 273 3.9E-48 T 22-04-2016 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 Hamap MF_00187 Protein FdhD [fdhD]. 13 274 36.312 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 PANTHER PTHR30592 5 274 1.6E-130 T 22-04-2016 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 274 3.7E-88 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 Pfam PF02634 FdhD/NarQ family 38 273 1.6E-71 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 Gene3D G3DSA:3.10.20.10 40 125 1.6E-32 T 22-04-2016 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 SUPERFAMILY SSF53927 25 273 1.44E-79 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 PIRSF PIRSF015626 4 274 7.3E-79 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPTB_RS21195 88b76fe4cf665cb25e1ec45406fd7ac7 274 PANTHER PTHR30592:SF1 5 274 1.6E-130 T 22-04-2016 YPTB_RS04930 4956da40c904dbfea7fdf143b036f4ab 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 2.5E-189 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YPTB_RS04930 4956da40c904dbfea7fdf143b036f4ab 447 PANTHER PTHR37839 1 447 1.9E-234 T 22-04-2016 YPTB_RS04930 4956da40c904dbfea7fdf143b036f4ab 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 47.358 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YPTB_RS04930 4956da40c904dbfea7fdf143b036f4ab 447 Pfam PF11973 NQRA C-terminal domain 262 310 5.2E-22 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 YPTB_RS04930 4956da40c904dbfea7fdf143b036f4ab 447 PANTHER PTHR37839:SF1 1 447 1.9E-234 T 22-04-2016 YPTB_RS04930 4956da40c904dbfea7fdf143b036f4ab 447 Gene3D G3DSA:2.40.50.100 42 80 1.5E-4 T 22-04-2016 YPTB_RS04930 4956da40c904dbfea7fdf143b036f4ab 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 4.2E-120 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 3.1E-55 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 3.1E-55 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 3.1E-55 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 3.1E-55 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 3.1E-55 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 3.1E-55 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 3.1E-55 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 4.2E-231 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 1.0E-94 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PANTHER PTHR22773:SF50 1 569 2.3E-241 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PANTHER PTHR22773 1 569 2.3E-241 T 22-04-2016 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPTB_RS13985 43af4633f6013a2ddc338ece266d26ab 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 1.8E-23 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 1.6E-40 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 326 38.551 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 1.6E-6 T 22-04-2016 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 PANTHER PTHR22960 1 282 1.4E-137 T 22-04-2016 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 1.4E-104 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 SMART SM00729 13 217 9.7E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 Gene3D G3DSA:3.20.20.70 3 304 6.5E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF04055 Radical SAM superfamily 18 178 1.0E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS06600 49cd695bbb4ae87cab0ca67bc84073f5 326 SUPERFAMILY SSF102114 4 279 8.11E-70 T 22-04-2016 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.551 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 PANTHER PTHR19136 13 273 1.8E-137 T 22-04-2016 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 5.6E-25 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 Gene3D G3DSA:2.160.10.10 89 255 6.0E-63 T 22-04-2016 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 SUPERFAMILY SSF51161 1 256 8.59E-80 T 22-04-2016 IPR011004 Trimeric LpxA-like YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 Gene3D G3DSA:1.10.166.10 1 70 4.0E-32 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.4E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 PANTHER PTHR19136:SF52 13 273 1.8E-137 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.2E-12 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS16270 294f7674fb2645e076c0cff651ca1369 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.7E-159 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPTB_RS18090 706b3f07a1f599c2ee6f443d58fbff21 238 PANTHER PTHR34982 1 238 5.3E-66 T 22-04-2016 YPTB_RS18090 706b3f07a1f599c2ee6f443d58fbff21 238 Pfam PF02108 Flagellar assembly protein FliH 100 223 7.6E-30 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPTB_RS18090 706b3f07a1f599c2ee6f443d58fbff21 238 PANTHER PTHR34982:SF1 1 238 5.3E-66 T 22-04-2016 YPTB_RS18090 706b3f07a1f599c2ee6f443d58fbff21 238 Pfam PF09811 Essential protein Yae1, N terminal 49 86 1.8E-9 T 22-04-2016 IPR019191 Essential protein Yae1, N-terminal YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 31 94 2.2E-4 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 SUPERFAMILY SSF52540 97 365 7.02E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 PANTHER PTHR15184:SF48 7 420 3.0E-195 T 22-04-2016 YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 SMART SM00382 162 343 2.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 9.9E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 Gene3D G3DSA:3.40.50.300 97 361 8.6E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 425 9.7E-156 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS01915 f0afa816e97e10a2c5a299c09e9a228d 445 PANTHER PTHR15184 7 420 3.0E-195 T 22-04-2016 YPTB_RS21085 916c25258aaaaf89ccfadd591a81b5e2 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.5E-21 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain YPTB_RS21085 916c25258aaaaf89ccfadd591a81b5e2 137 Gene3D G3DSA:2.60.40.790 5 137 1.5E-14 T 22-04-2016 IPR008978 HSP20-like chaperone YPTB_RS21085 916c25258aaaaf89ccfadd591a81b5e2 137 SUPERFAMILY SSF49764 30 137 9.77E-20 T 22-04-2016 IPR008978 HSP20-like chaperone YPTB_RS21085 916c25258aaaaf89ccfadd591a81b5e2 137 PANTHER PTHR11527 5 137 7.5E-44 T 22-04-2016 IPR031107 Small heat shock protein HSP20 YPTB_RS21085 916c25258aaaaf89ccfadd591a81b5e2 137 PANTHER PTHR11527:SF122 5 137 7.5E-44 T 22-04-2016 YPTB_RS21085 916c25258aaaaf89ccfadd591a81b5e2 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 43.693 T 22-04-2016 IPR023728 Small heat shock protein IbpA YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 Pfam PF00175 Oxidoreductase NAD-binding domain 205 307 3.4E-23 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 Pfam PF00970 Oxidoreductase FAD-binding domain 103 194 1.6E-20 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 152 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 293 301 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 204 223 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 130 142 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 189 198 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 229 238 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 SUPERFAMILY SSF63380 100 195 1.55E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 SUPERFAMILY SSF52343 198 327 1.03E-33 T 22-04-2016 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 Gene3D G3DSA:2.40.30.10 100 195 3.6E-24 T 22-04-2016 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 SUPERFAMILY SSF54292 2 96 1.21E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PANTHER PTHR19370 32 326 1.8E-110 T 22-04-2016 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 Gene3D G3DSA:3.10.20.30 2 99 2.4E-27 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 PANTHER PTHR19370:SF68 32 326 1.8E-110 T 22-04-2016 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 Gene3D G3DSA:3.40.50.80 199 327 1.9E-34 T 22-04-2016 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 79 2.3E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS05510 c72c0bbccc477a4dea4fc13b857ad7e1 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 437 5.9E-160 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 PANTHER PTHR15184:SF9 1 437 5.9E-231 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 357 1.2E-66 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 PANTHER PTHR15184 1 437 5.9E-231 T 22-04-2016 YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 SUPERFAMILY SSF52540 95 363 3.8E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 SMART SM00382 159 341 4.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS18085 fe1dc0a9cd6473c773668be0133fe4aa 446 Gene3D G3DSA:3.40.50.300 97 358 5.9E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02630 1834649026af33c0268bc7cb1a058b3f 87 SUPERFAMILY SSF159871 4 87 1.7E-26 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS02630 1834649026af33c0268bc7cb1a058b3f 87 Gene3D G3DSA:3.30.1660.10 18 87 3.2E-28 T 22-04-2016 IPR025543 Dodecin-like YPTB_RS02630 1834649026af33c0268bc7cb1a058b3f 87 PANTHER PTHR34156 2 87 8.3E-57 T 22-04-2016 YPTB_RS02630 1834649026af33c0268bc7cb1a058b3f 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 6.4E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS02630 1834649026af33c0268bc7cb1a058b3f 87 PANTHER PTHR34156:SF5 2 87 8.3E-57 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Pfam PF03173 Putative carbohydrate binding domain 38 196 2.3E-69 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF81296 786 889 6.3E-39 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 SMART SM01081 36 197 5.5E-103 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 216 334 2.1E-14 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:3.20.20.80 336 838 5.7E-151 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600 798 885 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600 153 398 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600 572 779 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600 421 462 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600 480 544 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF49384 29 199 9.83E-71 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 810 885 2.5E-32 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:2.60.40.320 839 888 4.5E-29 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF55545 206 337 5.23E-27 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 338 769 5.9E-109 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:3.30.379.10 213 335 1.4E-24 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:2.60.40.290 29 169 1.5E-61 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF51445 338 778 5.9E-139 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 751 768 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 332 349 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 298 318 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 438 455 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 733 749 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 532 545 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 505 523 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 361 382 1.2E-41 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600:SF12 798 885 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600:SF12 153 398 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600:SF12 572 779 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600:SF12 421 462 3.2E-218 T 22-04-2016 YPTB_RS06215 4988dd1149bfee988e4649ef7f102572 891 PANTHER PTHR22600:SF12 480 544 3.2E-218 T 22-04-2016 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 177.366 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 5.3E-148 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 SUPERFAMILY SSF56276 112 173 9.02E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 SUPERFAMILY SSF56276 43 84 9.02E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 PANTHER PTHR33866:SF1 15 84 1.2E-174 T 22-04-2016 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 PIRSF PIRSF001356 1 263 4.3E-157 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 PANTHER PTHR33866 15 84 1.2E-174 T 22-04-2016 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 4.5E-29 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 PANTHER PTHR33866 112 263 1.2E-174 T 22-04-2016 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 Gene3D G3DSA:3.60.90.10 33 186 3.4E-46 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPTB_RS04020 3f2adb5573c192dc86af1dfb6e8e3144 264 PANTHER PTHR33866:SF1 112 263 1.2E-174 T 22-04-2016 YPTB_RS04950 3d18537a3053854a95b35b035ab4c400 198 PANTHER PTHR30335:SF1 2 198 9.5E-144 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS04950 3d18537a3053854a95b35b035ab4c400 198 PANTHER PTHR30335 2 198 9.5E-144 T 22-04-2016 YPTB_RS04950 3d18537a3053854a95b35b035ab4c400 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.7E-103 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS04950 3d18537a3053854a95b35b035ab4c400 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.32 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS04950 3d18537a3053854a95b35b035ab4c400 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 4.9E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS04950 3d18537a3053854a95b35b035ab4c400 198 PIRSF PIRSF006102 1 198 2.9E-64 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 Pfam PF00266 Aminotransferase class-V 10 373 4.6E-88 T 22-04-2016 IPR000192 Aminotransferase class V domain YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 409 7.2E-230 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 PANTHER PTHR11601:SF45 7 409 9.4E-244 T 22-04-2016 YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 400 54.482 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 PANTHER PTHR11601 7 409 9.4E-244 T 22-04-2016 YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 Gene3D G3DSA:3.90.1150.10 260 380 6.1E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 Gene3D G3DSA:3.40.640.10 22 259 6.8E-96 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 SUPERFAMILY SSF53383 8 395 1.71E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS15465 47eef6a78366efcbd5162fa17098164a 409 PIRSF PIRSF005572 7 389 4.8E-137 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPTB_RS12865 dcc9804cae67d267a0e52903a019583d 236 SUPERFAMILY SSF56935 54 236 3.14E-12 T 22-04-2016 YPTB_RS12865 dcc9804cae67d267a0e52903a019583d 236 PANTHER PTHR38105 4 236 1.7E-136 T 22-04-2016 YPTB_RS12865 dcc9804cae67d267a0e52903a019583d 236 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 19 236 1.7E-75 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin YPTB_RS12865 dcc9804cae67d267a0e52903a019583d 236 PANTHER PTHR38105:SF1 4 236 1.7E-136 T 22-04-2016 YPTB_RS12865 dcc9804cae67d267a0e52903a019583d 236 Gene3D G3DSA:2.40.230.30 26 236 8.8E-68 T 22-04-2016 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.46E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.46E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.46E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 498 521 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 461 483 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 323 343 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 250 265 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 414 437 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PANTHER PTHR12428 165 546 8.2E-157 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 PANTHER PTHR12428:SF14 165 546 8.2E-157 T 22-04-2016 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 26.628 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 2.0E-120 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 Pfam PF14849 YidC periplasmic domain 61 342 2.3E-90 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.5E-69 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPTB_RS21315 e19c7f67c88b4407a512b11b57f8c4b5 546 Pfam PF02096 60Kd inner membrane protein 353 532 1.7E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPTB_RS06255 c0fac093a306f107c0672fd50f00c830 87 PANTHER PTHR33609:SF1 1 86 5.9E-51 T 22-04-2016 YPTB_RS06255 c0fac093a306f107c0672fd50f00c830 87 Pfam PF01527 Transposase 2 70 2.9E-23 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPTB_RS06255 c0fac093a306f107c0672fd50f00c830 87 Gene3D G3DSA:1.10.10.60 7 83 8.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06255 c0fac093a306f107c0672fd50f00c830 87 SUPERFAMILY SSF46689 1 72 2.33E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06255 c0fac093a306f107c0672fd50f00c830 87 PANTHER PTHR33609 1 86 5.9E-51 T 22-04-2016 YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.2E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.2E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 Gene3D G3DSA:3.90.79.10 3 152 2.3E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 SUPERFAMILY SSF55811 6 155 4.6E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.062 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 PANTHER PTHR23114 1 174 1.4E-73 T 22-04-2016 YPTB_RS16440 653463b6538c0dcac193641c1c3155d2 175 Pfam PF00293 NUDIX domain 7 146 9.9E-29 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS19300 d2e3807b2d845f4eafc88e5824f400b3 206 Pfam PF01794 Ferric reductase like transmembrane component 48 161 2.1E-16 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain YPTB_RS19300 d2e3807b2d845f4eafc88e5824f400b3 206 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 206 23.603 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 YPTB_RS19300 d2e3807b2d845f4eafc88e5824f400b3 206 PANTHER PTHR36964 1 206 5.3E-77 T 22-04-2016 YPTB_RS05885 5ea3e45bd0811a8b5c935e0de8ef0b47 81 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 75 1.1E-33 T 22-04-2016 YPTB_RS05885 5ea3e45bd0811a8b5c935e0de8ef0b47 81 Gene3D G3DSA:1.10.260.40 1 70 2.7E-37 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS05885 5ea3e45bd0811a8b5c935e0de8ef0b47 81 SUPERFAMILY SSF47413 3 70 1.74E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 Pfam PF04851 Type III restriction enzyme, res subunit 316 485 1.4E-19 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 Gene3D G3DSA:3.40.50.300 308 500 1.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 9 225 2.7E-43 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 23 739 1.1E-143 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 PANTHER PTHR30195 266 1008 1.5E-207 T 22-04-2016 YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 PANTHER PTHR30195 2 231 1.5E-207 T 22-04-2016 YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 SUPERFAMILY SSF52540 282 541 8.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 SUPERFAMILY SSF52540 639 727 2.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 SUPERFAMILY SSF52540 345 393 2.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 SMART SM00487 312 515 3.2E-10 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 PANTHER PTHR30195:SF15 266 1008 1.5E-207 T 22-04-2016 YPTB_RS20955 7bcf1a931afb81dc4427436045d12992 1092 PANTHER PTHR30195:SF15 2 231 1.5E-207 T 22-04-2016 YPTB_RS02145 58cbea32495370e49791f95ad08149a3 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 YPTB_RS02145 58cbea32495370e49791f95ad08149a3 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 6.3E-34 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 YPTB_RS02145 58cbea32495370e49791f95ad08149a3 123 PANTHER PTHR34299 1 121 6.1E-41 T 22-04-2016 YPTB_RS02145 58cbea32495370e49791f95ad08149a3 123 Gene3D G3DSA:1.10.3830.10 4 121 1.8E-43 T 22-04-2016 YPTB_RS02145 58cbea32495370e49791f95ad08149a3 123 PANTHER PTHR34299:SF1 1 121 6.1E-41 T 22-04-2016 YPTB_RS07155 58e866bad9c182294a3edd4cbf66cbb5 94 SUPERFAMILY SSF101125 2 89 5.62E-35 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPTB_RS07155 58e866bad9c182294a3edd4cbf66cbb5 94 Pfam PF09204 Bacterial self-protective colicin-like immunity 1 87 7.9E-34 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPTB_RS14525 9c38c7323e040341fb04a479c332af99 364 PANTHER PTHR30163:SF0 1 362 1.2E-222 T 22-04-2016 YPTB_RS14525 9c38c7323e040341fb04a479c332af99 364 Pfam PF13406 Transglycosylase SLT domain 55 349 1.3E-91 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 YPTB_RS14525 9c38c7323e040341fb04a479c332af99 364 PANTHER PTHR30163 1 362 1.2E-222 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YPTB_RS14525 9c38c7323e040341fb04a479c332af99 364 SUPERFAMILY SSF53955 55 351 5.55E-94 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS14525 9c38c7323e040341fb04a479c332af99 364 Gene3D G3DSA:1.10.530.10 244 353 7.1E-57 T 22-04-2016 YPTB_RS14525 9c38c7323e040341fb04a479c332af99 364 Gene3D G3DSA:1.10.530.10 110 163 7.1E-57 T 22-04-2016 YPTB_RS14525 9c38c7323e040341fb04a479c332af99 364 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 352 5.2E-121 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YPTB_RS13895 1d9c7b6c4643e1f3ec46b529e26d4160 455 PANTHER PTHR11236 39 451 4.6E-153 T 22-04-2016 YPTB_RS13895 1d9c7b6c4643e1f3ec46b529e26d4160 455 SUPERFAMILY SSF56322 23 446 2.09E-97 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS13895 1d9c7b6c4643e1f3ec46b529e26d4160 455 Gene3D G3DSA:3.60.120.10 38 450 1.3E-83 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS13895 1d9c7b6c4643e1f3ec46b529e26d4160 455 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 120 444 1.9E-102 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 YPTB_RS13895 1d9c7b6c4643e1f3ec46b529e26d4160 455 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 448 42.431 T 22-04-2016 YPTB_RS13895 1d9c7b6c4643e1f3ec46b529e26d4160 455 Pfam PF00425 chorismate binding enzyme 189 438 4.3E-65 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB_RS13895 1d9c7b6c4643e1f3ec46b529e26d4160 455 PANTHER PTHR11236:SF3 39 451 4.6E-153 T 22-04-2016 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.0E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PIRSF PIRSF000349 1 192 4.1E-87 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 4.7E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PANTHER PTHR11404 1 192 1.5E-111 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 Gene3D G3DSA:1.10.287.990 20 82 4.6E-25 T 22-04-2016 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 SUPERFAMILY SSF54719 82 191 1.83E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 PANTHER PTHR11404:SF8 1 192 1.5E-111 T 22-04-2016 YPTB_RS12525 390e431b86a5bce7afc30fad2d3d487f 192 SUPERFAMILY SSF46609 1 83 1.83E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS08690 123e6a1fd3992aa5fd199a66beb5e7e6 465 PIRSF PIRSF006603 10 461 9.6E-67 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS08690 123e6a1fd3992aa5fd199a66beb5e7e6 465 Pfam PF01554 MatE 260 421 2.8E-19 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS08690 123e6a1fd3992aa5fd199a66beb5e7e6 465 Pfam PF01554 MatE 30 190 2.0E-35 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS08690 123e6a1fd3992aa5fd199a66beb5e7e6 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 434 3.3E-63 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS08690 123e6a1fd3992aa5fd199a66beb5e7e6 465 PANTHER PTHR11206:SF95 1 457 1.8E-107 T 22-04-2016 YPTB_RS08690 123e6a1fd3992aa5fd199a66beb5e7e6 465 PANTHER PTHR11206 1 457 1.8E-107 T 22-04-2016 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 SUPERFAMILY SSF52402 6 209 1.01E-74 T 22-04-2016 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.9E-166 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 Gene3D G3DSA:3.40.50.620 244 253 1.4E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 Gene3D G3DSA:3.40.50.620 2 210 1.4E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 PANTHER PTHR23293 245 302 1.7E-99 T 22-04-2016 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 PANTHER PTHR23293 178 211 1.7E-99 T 22-04-2016 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 PANTHER PTHR23293 1 158 1.7E-99 T 22-04-2016 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.492 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 PIRSF PIRSF002936 1 302 4.7E-155 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPTB_RS04255 aacf8b0209fb2666861e3a669070cfad 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.0E-64 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82693 566 672 3.87E-27 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82866 296 497 6.28E-49 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.2090.10 181 275 3.3E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PANTHER PTHR32063:SF32 1 1041 0.0 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82693 39 131 2.35E-27 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82714 182 272 2.62E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.2090.10 723 810 6.5E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82693 136 182 1.78E-25 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82714 723 810 1.57E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 PANTHER PTHR32063 1 1041 0.0 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82866 807 1031 1.83E-46 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.70.1430 39 139 1.6E-34 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82693 274 330 1.78E-25 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:1.10.3850.10 815 1028 1.1E-56 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:1.10.3850.10 279 498 4.9E-59 T 22-04-2016 YPTB_RS14985 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.70.1430 568 672 3.2E-31 T 22-04-2016 YPTB_RS15350 dc67cc5924f0c30cbda6fb030c572ba9 318 PANTHER PTHR31752:SF13 90 314 8.5E-112 T 22-04-2016 YPTB_RS15350 dc67cc5924f0c30cbda6fb030c572ba9 318 PANTHER PTHR31752 90 314 8.5E-112 T 22-04-2016 YPTB_RS15350 dc67cc5924f0c30cbda6fb030c572ba9 318 Pfam PF03547 Membrane transport protein 14 150 3.1E-8 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YPTB_RS15350 dc67cc5924f0c30cbda6fb030c572ba9 318 Pfam PF03547 Membrane transport protein 169 307 3.7E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 SUPERFAMILY SSF51395 223 374 7.33E-99 T 22-04-2016 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 SUPERFAMILY SSF51395 7 193 7.33E-99 T 22-04-2016 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 PANTHER PTHR10578:SF65 7 375 2.0E-165 T 22-04-2016 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.702 T 22-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 Gene3D G3DSA:3.20.20.70 7 377 2.6E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.3E-125 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 PIRSF PIRSF000138 2 380 3.0E-122 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 YPTB_RS08680 6e2207647a187998e232e1f203e3f394 381 PANTHER PTHR10578 7 375 2.0E-165 T 22-04-2016 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 PANTHER PTHR30146:SF34 4 355 1.1E-209 T 22-04-2016 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 SMART SM00354 5 75 2.1E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 SUPERFAMILY SSF47413 5 63 3.66E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 Gene3D G3DSA:3.40.50.2300 66 179 9.0E-34 T 22-04-2016 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 Pfam PF13377 Periplasmic binding protein-like domain 173 331 2.9E-32 T 22-04-2016 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 1.5E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 SUPERFAMILY SSF53822 62 325 5.6E-51 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 Gene3D G3DSA:3.40.50.2300 180 307 1.4E-40 T 22-04-2016 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 Gene3D G3DSA:1.10.260.40 6 65 9.8E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16740 22c31d849143f22eff8b83af9303fe58 357 PANTHER PTHR30146 4 355 1.1E-209 T 22-04-2016 YPTB_RS16670 ee9d56fd5dd9420fbc91abd59445dc26 296 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 295 3.5E-80 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YPTB_RS16670 ee9d56fd5dd9420fbc91abd59445dc26 296 PANTHER PTHR32502 19 296 5.1E-194 T 22-04-2016 YPTB_RS16670 ee9d56fd5dd9420fbc91abd59445dc26 296 PANTHER PTHR32502:SF6 19 296 5.1E-194 T 22-04-2016 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 SMART SM00382 375 560 2.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 SUPERFAMILY SSF52540 363 582 2.08E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 Pfam PF00664 ABC transporter transmembrane region 26 291 5.1E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 SUPERFAMILY SSF90123 11 329 4.45E-54 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 PANTHER PTHR24221:SF261 1 587 0.0 T 22-04-2016 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 7.3E-207 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 Gene3D G3DSA:3.40.50.300 368 586 1.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 Gene3D G3DSA:1.20.1560.10 11 329 4.7E-44 T 22-04-2016 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 PANTHER PTHR24221 1 587 0.0 T 22-04-2016 YPTB_RS07720 2ca7c5a25f7026777460de0a2bca74e7 588 Pfam PF00005 ABC transporter 369 514 3.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 Gene3D G3DSA:3.30.1330.20 214 321 8.6E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 8.6E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 1.1E-141 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 Gene3D G3DSA:3.40.50.1440 13 213 1.5E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 SUPERFAMILY SSF52490 12 207 1.44E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 SMART SM00865 206 324 8.3E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 SMART SM00864 12 204 6.1E-112 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 SUPERFAMILY SSF55307 203 319 2.98E-42 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 PANTHER PTHR30314:SF3 1 381 2.5E-208 T 22-04-2016 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 PANTHER PTHR30314 1 381 2.5E-208 T 22-04-2016 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 8.8E-42 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPTB_RS03880 a732df4bef33207a740f6e7c04080b78 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.05 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 YPTB_RS16430 b83e57b0876766d6b8765828fbccbc68 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPTB_RS16430 b83e57b0876766d6b8765828fbccbc68 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 2.7E-80 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPTB_RS16430 b83e57b0876766d6b8765828fbccbc68 290 PANTHER PTHR30589 2 284 1.6E-137 T 22-04-2016 YPTB_RS16430 b83e57b0876766d6b8765828fbccbc68 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 4.0E-106 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPTB_RS16430 b83e57b0876766d6b8765828fbccbc68 290 PANTHER PTHR30589:SF0 2 284 1.6E-137 T 22-04-2016 YPTB_RS16430 b83e57b0876766d6b8765828fbccbc68 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.37 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPTB_RS05270 74551218fb637163cb9b5703efd00a34 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.9E-14 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 YPTB_RS05270 74551218fb637163cb9b5703efd00a34 204 PANTHER PTHR11403 8 204 5.0E-123 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 YPTB_RS05270 74551218fb637163cb9b5703efd00a34 204 Gene3D G3DSA:1.20.120.80 25 202 8.4E-52 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 YPTB_RS05270 74551218fb637163cb9b5703efd00a34 204 SUPERFAMILY SSF81452 21 202 7.19E-58 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 YPTB_RS05270 74551218fb637163cb9b5703efd00a34 204 PANTHER PTHR11403:SF2 8 204 5.0E-123 T 22-04-2016 YPTB_RS05270 74551218fb637163cb9b5703efd00a34 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.3E-86 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 YPTB_RS17720 e45d1c88ed822df4914871ae3b8056eb 174 Gene3D G3DSA:1.25.10.10 83 170 3.4E-4 T 22-04-2016 IPR011989 Armadillo-like helical YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 SMART SM01007 11 239 3.1E-34 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 8.3E-39 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 58.563 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 Gene3D G3DSA:3.40.225.10 2 272 2.4E-101 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 PANTHER PTHR22789 68 272 2.5E-134 T 22-04-2016 YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 PANTHER PTHR22789 1 39 2.5E-134 T 22-04-2016 YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 PANTHER PTHR22789:SF4 68 272 2.5E-134 T 22-04-2016 YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 PANTHER PTHR22789:SF4 1 39 2.5E-134 T 22-04-2016 YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 SUPERFAMILY SSF53639 1 270 4.51E-75 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS02215 6aca53d297a52d5a5a514602f522c72a 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 5.0E-143 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 YPTB_RS14785 a1fafd6fec7902ceb1e7ff5356a6c6c8 472 PANTHER PTHR10579 53 425 1.0E-220 T 22-04-2016 YPTB_RS14785 a1fafd6fec7902ceb1e7ff5356a6c6c8 472 Pfam PF00092 von Willebrand factor type A domain 97 266 5.4E-23 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS14785 a1fafd6fec7902ceb1e7ff5356a6c6c8 472 Gene3D G3DSA:3.40.50.410 92 271 4.2E-28 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS14785 a1fafd6fec7902ceb1e7ff5356a6c6c8 472 PANTHER PTHR10579:SF58 53 425 1.0E-220 T 22-04-2016 YPTB_RS14785 a1fafd6fec7902ceb1e7ff5356a6c6c8 472 SUPERFAMILY SSF53300 93 269 1.36E-35 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS14785 a1fafd6fec7902ceb1e7ff5356a6c6c8 472 SMART SM00327 95 274 4.8E-26 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 Gene3D G3DSA:3.40.190.10 170 295 3.4E-31 T 22-04-2016 YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 Gene3D G3DSA:3.40.190.10 21 165 8.8E-52 T 22-04-2016 YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 326 1.0E-175 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 Pfam PF13531 Bacterial extracellular solute-binding protein 41 280 6.8E-43 T 22-04-2016 YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 SUPERFAMILY SSF53850 21 326 7.91E-91 T 22-04-2016 YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 PANTHER PTHR30368:SF2 1 329 4.3E-194 T 22-04-2016 YPTB_RS00475 9b4b4b92f5b5792499f52aeed37b01ba 329 PANTHER PTHR30368 1 329 4.3E-194 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.90.580.10 1 101 3.0E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.407 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 1.1E-150 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:1.20.50.20 368 426 1.7E-27 T 22-04-2016 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:1.10.860.10 439 580 3.2E-54 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 SMART SM00766 450 575 2.4E-55 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.40.1360.10 241 367 1.9E-47 T 22-04-2016 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 PANTHER PTHR30313 3 580 3.1E-186 T 22-04-2016 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF56731 115 427 1.48E-114 T 22-04-2016 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 2.4E-35 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 1.2E-12 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF57783 4 100 5.27E-35 T 22-04-2016 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 4.6E-44 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF117023 447 578 2.48E-46 T 22-04-2016 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Pfam PF01807 CHC2 zinc finger 7 100 3.2E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.90.980.10 115 240 1.5E-48 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 Pfam PF13155 Toprim-like 263 348 5.1E-15 T 22-04-2016 YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 SMART SM00493 259 330 1.8E-22 T 22-04-2016 IPR006171 Toprim domain YPTB_RS18470 7864b395b2d16ed221ecee88809660f4 582 SMART SM00400 36 90 1.4E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 SUPERFAMILY SSF161098 286 528 4.06E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 2.0E-240 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 PANTHER PTHR30183:SF8 1 535 4.3E-301 T 22-04-2016 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 261 6.0E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 371 525 6.6E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 Gene3D G3DSA:1.10.3720.10 294 532 1.2E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 Gene3D G3DSA:1.10.3720.10 17 266 3.9E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 SUPERFAMILY SSF161098 10 264 4.19E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS03700 b9667c6b5551c0b4c84d7493e3f83f17 535 PANTHER PTHR30183 1 535 4.3E-301 T 22-04-2016 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 SUPERFAMILY SSF103039 48 230 9.94E-20 T 22-04-2016 IPR028976 CheC-like domain YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 Gene3D G3DSA:2.30.330.10 243 322 4.0E-4 T 22-04-2016 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 PIRSF PIRSF002888 2 330 1.1E-92 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 PANTHER PTHR30034:SF0 2 332 2.9E-154 T 22-04-2016 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 Pfam PF02154 Flagellar motor switch protein FliM 37 230 2.9E-74 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 PANTHER PTHR30034 2 332 2.9E-154 T 22-04-2016 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 7.4E-15 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 3.0E-108 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPTB_RS09330 ffb9487d3681490b7bbe554c3a9be160 333 SUPERFAMILY SSF101801 249 322 2.09E-11 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 SUPERFAMILY SSF52540 237 359 9.81E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 SUPERFAMILY SSF52540 50 169 9.81E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 SMART SM00490 263 345 1.0E-9 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 2.5E-24 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 SUPERFAMILY SSF57829 424 466 3.3E-7 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 Gene3D G3DSA:3.40.50.300 3 155 6.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 SMART SM00487 1 185 3.2E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031 233 367 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031 1 153 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031 443 584 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031 172 208 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031:SF319 233 367 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031:SF319 1 153 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031:SF319 443 584 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 PANTHER PTHR24031:SF319 172 208 1.2E-223 T 22-04-2016 YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 Gene3D G3DSA:3.40.50.300 238 354 3.0E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07205 541a040784b1fec27bce560a8a9a4b96 585 Pfam PF00271 Helicase conserved C-terminal domain 242 343 7.3E-12 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 SUPERFAMILY SSF56601 422 610 2.72E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 SUPERFAMILY SSF56601 211 233 2.72E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 SUPERFAMILY SSF56601 672 833 2.72E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 SUPERFAMILY SSF56601 262 313 2.72E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 610 6.0E-25 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 785 2.6E-172 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282:SF5 421 612 6.2E-293 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Gene3D G3DSA:1.10.3810.10 55 232 8.3E-76 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 4.4E-31 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Gene3D G3DSA:2.40.50.140 347 421 1.7E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282 672 751 6.2E-293 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 SUPERFAMILY SSF53955 43 257 4.5E-80 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282 421 612 6.2E-293 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Gene3D G3DSA:3.40.710.10 422 611 1.5E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Gene3D G3DSA:3.40.710.10 673 832 1.5E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Gene3D G3DSA:3.40.710.10 233 313 1.5E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282 2 310 6.2E-293 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282 767 844 6.2E-293 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 Pfam PF00912 Transglycosylase 55 229 5.5E-65 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282:SF5 672 751 6.2E-293 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282:SF5 2 310 6.2E-293 T 22-04-2016 YPTB_RS20305 af6797995a0902d6679ab9ad7476c294 851 PANTHER PTHR32282:SF5 767 844 6.2E-293 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF56024 500 682 1.3E-68 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 Pfam PF02503 Polyphosphate kinase middle domain 119 320 5.5E-43 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.4E-143 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF56024 315 497 1.0E-55 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.8E-257 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 34.447 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 PIRSF PIRSF015589 1 687 9.4E-242 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 PANTHER PTHR30218:SF0 1 686 0.0 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.870.10 315 499 1.3E-74 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.1840.10 106 300 9.5E-53 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.870.10 500 682 3.6E-68 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 PANTHER PTHR30218 1 686 0.0 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF143724 107 312 2.35E-60 T 22-04-2016 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF140356 3 105 2.22E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YPTB_RS15170 aed1f874c049fc49690624692c92a94b 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.0E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 251 359 5.3E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 258 365 7.06E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 156 256 2.59E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 1.8E-14 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 8.8E-46 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.30.310.50 360 443 3.9E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.1E-194 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 2 181 1.02E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.7E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 4 151 1.6E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 176 250 1.9E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.355 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 PANTHER PTHR22573 1 444 2.4E-189 T 22-04-2016 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF55957 357 445 7.19E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 PANTHER PTHR22573:SF15 1 444 2.4E-189 T 22-04-2016 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 5.5E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02720 917ffccec3c58d39b1f52151e6074ab4 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 2.5E-51 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 PANTHER PTHR33175 1 93 2.3E-48 T 22-04-2016 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 4.9E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.373 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 SMART SM00411 1 91 2.7E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 Gene3D G3DSA:4.10.520.10 1 91 9.3E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 SUPERFAMILY SSF47729 1 91 3.83E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPTB_RS07825 cd62ff6e78886be13899a872c9395e47 94 PANTHER PTHR33175:SF5 1 93 2.3E-48 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912 5 154 2.7E-24 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912 171 192 2.7E-24 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912 208 317 2.7E-24 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Gene3D G3DSA:3.50.50.60 5 119 4.1E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 4.6E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912:SF140 208 317 2.7E-24 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912:SF140 5 154 2.7E-24 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.5E-7 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-7 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.5E-7 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912:SF140 171 192 2.7E-24 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Gene3D G3DSA:3.50.50.60 120 346 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.2E-14 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.2E-14 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.2E-14 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.2E-14 T 22-04-2016 YPTB_RS13305 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 SUPERFAMILY SSF51905 4 338 1.97E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS15195 e25bdb0e7db45c63d9b3de13eb97e02d 282 SUPERFAMILY SSF161098 19 273 1.21E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15195 e25bdb0e7db45c63d9b3de13eb97e02d 282 PANTHER PTHR30193 1 280 1.2E-112 T 22-04-2016 YPTB_RS15195 e25bdb0e7db45c63d9b3de13eb97e02d 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 271 7.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15195 e25bdb0e7db45c63d9b3de13eb97e02d 282 Gene3D G3DSA:1.10.3720.10 20 274 1.1E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15195 e25bdb0e7db45c63d9b3de13eb97e02d 282 PANTHER PTHR30193:SF20 1 280 1.2E-112 T 22-04-2016 YPTB_RS20565 dfafbc6f7bc0a473e3f9328f1a18d261 335 Gene3D G3DSA:3.40.1190.20 4 333 3.6E-54 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS20565 dfafbc6f7bc0a473e3f9328f1a18d261 335 PANTHER PTHR10584:SF166 1 308 4.3E-68 T 22-04-2016 YPTB_RS20565 dfafbc6f7bc0a473e3f9328f1a18d261 335 PANTHER PTHR10584 1 308 4.3E-68 T 22-04-2016 YPTB_RS20565 dfafbc6f7bc0a473e3f9328f1a18d261 335 SUPERFAMILY SSF53613 6 328 2.81E-52 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS20565 dfafbc6f7bc0a473e3f9328f1a18d261 335 Pfam PF00294 pfkB family carbohydrate kinase 29 319 6.8E-34 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS05160 a57d62d0e9976f699869817f934c0cc6 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 103 2.3E-32 T 22-04-2016 IPR003849 Preprotein translocase YajC YPTB_RS05160 a57d62d0e9976f699869817f934c0cc6 111 SMART SM01323 20 103 1.7E-37 T 22-04-2016 IPR003849 Preprotein translocase YajC YPTB_RS05160 a57d62d0e9976f699869817f934c0cc6 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 1.7E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC YPTB_RS05160 a57d62d0e9976f699869817f934c0cc6 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 1.7E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC YPTB_RS05160 a57d62d0e9976f699869817f934c0cc6 111 PANTHER PTHR33909:SF1 1 109 7.6E-35 T 22-04-2016 YPTB_RS05160 a57d62d0e9976f699869817f934c0cc6 111 PANTHER PTHR33909 1 109 7.6E-35 T 22-04-2016 YPTB_RS05160 a57d62d0e9976f699869817f934c0cc6 111 Pfam PF02699 Preprotein translocase subunit 24 100 3.0E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC YPTB_RS03425 79dc30b198d4cdb91ec3d84476de8fa2 459 Pfam PF07690 Major Facilitator Superfamily 82 408 4.9E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS03425 79dc30b198d4cdb91ec3d84476de8fa2 459 PANTHER PTHR23508:SF5 1 459 0.0 T 22-04-2016 YPTB_RS03425 79dc30b198d4cdb91ec3d84476de8fa2 459 Gene3D G3DSA:1.20.1250.20 38 245 7.7E-22 T 22-04-2016 YPTB_RS03425 79dc30b198d4cdb91ec3d84476de8fa2 459 Gene3D G3DSA:1.20.1250.20 264 446 5.3E-18 T 22-04-2016 YPTB_RS03425 79dc30b198d4cdb91ec3d84476de8fa2 459 SUPERFAMILY SSF103473 19 442 2.09E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS03425 79dc30b198d4cdb91ec3d84476de8fa2 459 PANTHER PTHR23508 1 459 0.0 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 Gene3D G3DSA:3.40.190.10 143 279 3.0E-25 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 29 348 1.8E-161 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 PANTHER PTHR30006 19 347 7.2E-142 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 Gene3D G3DSA:3.40.190.10 280 338 3.3E-17 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 Gene3D G3DSA:3.40.190.10 24 141 3.3E-17 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 SUPERFAMILY SSF53850 42 343 1.33E-64 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 PANTHER PTHR30006:SF3 19 347 7.2E-142 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 Pfam PF13343 Bacterial extracellular solute-binding protein 95 322 2.0E-17 T 22-04-2016 YPTB_RS03705 c9e3093c052a0474922ab9a0de18fcf9 348 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 40 342 1.3E-144 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 YPTB_RS19675 182d5fe8d2028173af334dd7b04a3dcf 172 Pfam PF05638 Type VI secretion system effector, Hcp 7 155 3.4E-32 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS19675 182d5fe8d2028173af334dd7b04a3dcf 172 PANTHER PTHR34319 1 172 5.1E-67 T 22-04-2016 YPTB_RS19675 182d5fe8d2028173af334dd7b04a3dcf 172 SUPERFAMILY SSF141452 3 168 1.31E-39 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS19675 182d5fe8d2028173af334dd7b04a3dcf 172 Gene3D G3DSA:2.30.110.20 1 166 1.6E-32 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS19675 182d5fe8d2028173af334dd7b04a3dcf 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 2.9E-64 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.0E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 SUPERFAMILY SSF47413 3 60 5.35E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 PANTHER PTHR30146 2 327 1.7E-195 T 22-04-2016 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 Gene3D G3DSA:3.40.50.2300 172 309 1.3E-46 T 22-04-2016 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 Gene3D G3DSA:3.40.50.2300 55 171 8.2E-33 T 22-04-2016 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 SMART SM00354 2 72 1.0E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 8.0E-35 T 22-04-2016 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 SUPERFAMILY SSF53822 63 327 1.85E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 Gene3D G3DSA:1.10.260.40 3 54 7.7E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS18635 3f509d6b5cbc2535e6e96743aa822b72 328 PANTHER PTHR30146:SF58 2 327 1.7E-195 T 22-04-2016 YPTB_RS07760 25e2d16c9f5fbe407b96ed619f2049de 382 Pfam PF07690 Major Facilitator Superfamily 11 299 4.3E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS07760 25e2d16c9f5fbe407b96ed619f2049de 382 PANTHER PTHR23521:SF1 2 381 1.5E-229 T 22-04-2016 YPTB_RS07760 25e2d16c9f5fbe407b96ed619f2049de 382 Gene3D G3DSA:1.20.1250.20 6 181 5.2E-18 T 22-04-2016 YPTB_RS07760 25e2d16c9f5fbe407b96ed619f2049de 382 Gene3D G3DSA:1.20.1250.20 199 375 5.6E-18 T 22-04-2016 YPTB_RS07760 25e2d16c9f5fbe407b96ed619f2049de 382 PANTHER PTHR23521 2 381 1.5E-229 T 22-04-2016 YPTB_RS07760 25e2d16c9f5fbe407b96ed619f2049de 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 42.986 T 22-04-2016 IPR023745 MSF-type transporter, YcaD YPTB_RS07760 25e2d16c9f5fbe407b96ed619f2049de 382 SUPERFAMILY SSF103473 6 371 3.79E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS09625 f9f4d00fc87617a2229be302b4e082cb 302 PIRSF PIRSF020481 1 302 1.0E-128 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted YPTB_RS09625 f9f4d00fc87617a2229be302b4e082cb 302 Pfam PF04865 Baseplate J-like protein 118 261 1.3E-25 T 22-04-2016 IPR006949 Baseplate protein J-like YPTB_RS09625 f9f4d00fc87617a2229be302b4e082cb 302 PANTHER PTHR35862:SF1 1 302 9.6E-128 T 22-04-2016 YPTB_RS09625 f9f4d00fc87617a2229be302b4e082cb 302 PANTHER PTHR35862 1 302 9.6E-128 T 22-04-2016 YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 Pfam PF00043 Glutathione S-transferase, C-terminal domain 182 250 8.2E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 PANTHER PTHR11260 18 260 1.8E-129 T 22-04-2016 YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 4.4E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 PANTHER PTHR11260:SF258 18 260 1.8E-129 T 22-04-2016 YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 Gene3D G3DSA:3.40.30.10 35 130 1.1E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 SUPERFAMILY SSF52833 39 131 4.63E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 SUPERFAMILY SSF47616 181 259 3.68E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 SUPERFAMILY SSF47616 117 152 3.68E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS19420 76cf40487329355fefc8a112995a3333 283 Gene3D G3DSA:1.20.1050.10 131 254 8.6E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 Pfam PF13353 4Fe-4S single cluster domain 111 182 3.6E-6 T 22-04-2016 YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 1.2E-132 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 PIRSF PIRSF004911 3 342 2.1E-117 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 Gene3D G3DSA:3.20.20.70 105 312 3.6E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 PANTHER PTHR30538:SF1 8 342 3.8E-145 T 22-04-2016 YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 8.2E-157 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 PANTHER PTHR30538 8 342 3.8E-145 T 22-04-2016 YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 Pfam PF04055 Radical SAM superfamily 118 199 1.9E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS02340 21728fdae55c41f24a5710390c70273f 342 SUPERFAMILY SSF102114 102 324 8.5E-26 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 PANTHER PTHR23389 1 531 7.0E-221 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Pfam PF14520 Helix-hairpin-helix domain 446 502 4.2E-6 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Gene3D G3DSA:2.40.50.140 319 391 4.4E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS14705 766c5917d445495877f61907bd52479c 670 PANTHER PTHR23389:SF9 1 531 7.0E-221 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.3E-10 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 PIRSF PIRSF001604 1 670 1.8E-261 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SMART SM00278 512 531 200.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SMART SM00278 480 499 0.79 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SMART SM00278 544 563 38.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SMART SM00278 446 465 17.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Gene3D G3DSA:3.30.470.30 119 252 1.6E-52 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Gene3D G3DSA:1.10.150.20 504 582 2.2E-30 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SMART SM00532 3 448 1.6E-284 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SUPERFAMILY SSF50249 318 400 1.88E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.2E-23 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 5.7E-13 T 22-04-2016 IPR001357 BRCT domain YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Gene3D G3DSA:3.40.50.10190 593 669 2.4E-26 T 22-04-2016 IPR001357 BRCT domain YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Gene3D G3DSA:1.10.287.610 2 67 2.2E-29 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SMART SM00292 594 669 2.1E-12 T 22-04-2016 IPR001357 BRCT domain YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SUPERFAMILY SSF52113 595 668 9.0E-19 T 22-04-2016 IPR001357 BRCT domain YPTB_RS14705 766c5917d445495877f61907bd52479c 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 5.6E-273 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SUPERFAMILY SSF47781 404 578 1.37E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 7.5E-138 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 SUPERFAMILY SSF56091 2 316 1.54E-123 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Gene3D G3DSA:1.10.150.20 435 502 7.8E-28 T 22-04-2016 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.312 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YPTB_RS14705 766c5917d445495877f61907bd52479c 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 2.1E-36 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YPTB_RS04665 24e2557701c5cebeb3cdf49da132cbc5 356 PANTHER PTHR21225 1 349 3.3E-224 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS04665 24e2557701c5cebeb3cdf49da132cbc5 356 SUPERFAMILY SSF51569 9 344 9.07E-136 T 22-04-2016 YPTB_RS04665 24e2557701c5cebeb3cdf49da132cbc5 356 Pfam PF00793 DAHP synthetase I family 39 340 3.4E-107 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS04665 24e2557701c5cebeb3cdf49da132cbc5 356 PIRSF PIRSF001361 1 354 2.9E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS04665 24e2557701c5cebeb3cdf49da132cbc5 356 PANTHER PTHR21225:SF0 1 349 3.3E-224 T 22-04-2016 YPTB_RS04665 24e2557701c5cebeb3cdf49da132cbc5 356 Gene3D G3DSA:3.20.20.70 10 347 2.8E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS04665 24e2557701c5cebeb3cdf49da132cbc5 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 347 1.6E-167 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS18800 4350ecf0f5c0870fcf3276d3782b7c22 331 Gene3D G3DSA:3.30.360.10 143 324 6.6E-65 T 22-04-2016 YPTB_RS18800 4350ecf0f5c0870fcf3276d3782b7c22 331 SUPERFAMILY SSF55347 127 292 5.07E-23 T 22-04-2016 YPTB_RS18800 4350ecf0f5c0870fcf3276d3782b7c22 331 Gene3D G3DSA:3.40.50.720 1 142 4.0E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18800 4350ecf0f5c0870fcf3276d3782b7c22 331 PANTHER PTHR22604 1 316 1.3E-158 T 22-04-2016 YPTB_RS18800 4350ecf0f5c0870fcf3276d3782b7c22 331 PANTHER PTHR22604:SF76 1 316 1.3E-158 T 22-04-2016 YPTB_RS18800 4350ecf0f5c0870fcf3276d3782b7c22 331 SUPERFAMILY SSF51735 2 152 4.57E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18800 4350ecf0f5c0870fcf3276d3782b7c22 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.4E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 324 336 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PANTHER PTHR11638 1 145 0.0 T 22-04-2016 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 364 1.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PANTHER PTHR11638 548 884 0.0 T 22-04-2016 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 25 74 0.0029 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 SUPERFAMILY SSF52540 568 860 4.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Pfam PF07724 AAA domain (Cdc48 subfamily) 619 785 7.4E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Gene3D G3DSA:3.40.50.300 190 372 1.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 SUPERFAMILY SSF52540 190 535 6.74E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 SUPERFAMILY SSF81923 15 123 1.94E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PANTHER PTHR11638:SF122 173 527 0.0 T 22-04-2016 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Gene3D G3DSA:1.10.8.60 374 455 3.2E-29 T 22-04-2016 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Gene3D G3DSA:1.10.8.60 801 882 2.7E-13 T 22-04-2016 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 668 686 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 623 641 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 697 715 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 730 744 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Gene3D G3DSA:3.40.50.300 573 800 1.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 863 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PANTHER PTHR11638:SF122 1 145 0.0 T 22-04-2016 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 SMART SM01086 791 882 1.5E-14 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PANTHER PTHR11638:SF122 548 884 0.0 T 22-04-2016 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 SMART SM00382 619 770 3.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 SMART SM00382 228 369 4.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 653 671 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 791 869 5.1E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 Gene3D G3DSA:1.10.1780.10 11 125 3.5E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS14475 ec9f37d5c47b70715945c05424c36a6b 885 PANTHER PTHR11638 173 527 0.0 T 22-04-2016 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 Gene3D G3DSA:1.20.200.10 139 416 1.0E-104 T 22-04-2016 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 Pfam PF10415 Fumarase C C-terminus 408 461 1.3E-25 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 Gene3D G3DSA:1.10.40.30 417 462 3.4E-33 T 22-04-2016 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 Gene3D G3DSA:1.10.275.10 3 138 9.7E-60 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.1E-5 T 22-04-2016 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.1E-5 T 22-04-2016 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PANTHER PTHR11444:SF1 1 461 3.1E-250 T 22-04-2016 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 SUPERFAMILY SSF48557 5 459 3.3E-157 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 8.8E-243 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 Pfam PF00206 Lyase 13 342 5.5E-117 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.381 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS11935 b13899c5195204304d84b0dd64780b54 465 PANTHER PTHR11444 1 461 3.1E-250 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PANTHER PTHR22912 1 461 1.6E-297 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.50.50.60 6 145 2.1E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.793 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.7E-52 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.50.50.60 146 334 2.7E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.5E-27 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.5E-27 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.5E-27 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 7.5E-27 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 7.5E-27 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 SUPERFAMILY SSF51905 1 322 1.04E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 1.4E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PANTHER PTHR22912:SF93 1 461 1.6E-297 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 3.1E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 PIRSF PIRSF000350 1 463 1.2E-71 T 22-04-2016 YPTB_RS00725 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.30.390.30 345 460 2.7E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 Gene3D G3DSA:1.20.1560.10 16 324 9.0E-37 T 22-04-2016 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 SUPERFAMILY SSF90123 16 324 5.36E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 21 561 1.1E-225 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 Gene3D G3DSA:3.40.50.300 346 561 1.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 PANTHER PTHR24222 16 590 0.0 T 22-04-2016 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 Pfam PF00005 ABC transporter 353 500 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 PANTHER PTHR24222:SF0 16 590 0.0 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 Pfam PF00664 ABC transporter transmembrane region 30 287 3.9E-8 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 SUPERFAMILY SSF52540 326 558 1.74E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00695 a9840ca7b9b75e4fa99310a2f5128d01 602 SMART SM00382 362 548 2.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS09215 a8ef7b2bfefe031ddf92f41c4d040948 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS09215 a8ef7b2bfefe031ddf92f41c4d040948 134 PANTHER PTHR30435:SF2 1 134 4.0E-69 T 22-04-2016 YPTB_RS09215 a8ef7b2bfefe031ddf92f41c4d040948 134 Pfam PF00460 Flagella basal body rod protein 7 37 2.3E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS09215 a8ef7b2bfefe031ddf92f41c4d040948 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 3.8E-11 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS09215 a8ef7b2bfefe031ddf92f41c4d040948 134 PANTHER PTHR30435 1 134 4.0E-69 T 22-04-2016 YPTB_RS09215 a8ef7b2bfefe031ddf92f41c4d040948 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 4.6E-52 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 Gene3D G3DSA:3.30.870.10 112 319 5.5E-36 T 22-04-2016 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 Gene3D G3DSA:3.30.870.10 320 483 3.0E-36 T 22-04-2016 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 3.9E-7 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.687 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 SMART SM00155 219 246 5.2E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 SMART SM00155 399 426 7.3E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 PANTHER PTHR21248 18 486 0.0 T 22-04-2016 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 SUPERFAMILY SSF56024 273 473 9.64E-51 T 22-04-2016 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 PANTHER PTHR21248:SF9 18 486 0.0 T 22-04-2016 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 SUPERFAMILY SSF56024 67 315 1.6E-48 T 22-04-2016 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 1.5E-209 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 Pfam PF13091 PLD-like domain 330 448 2.1E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain YPTB_RS11560 c020a1daaa3b794857ce2d38332c7696 486 Pfam PF13091 PLD-like domain 135 244 3.3E-12 T 22-04-2016 IPR025202 Phospholipase D-like domain YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 PIRSF PIRSF000148 4 336 5.1E-98 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Gene3D G3DSA:3.30.360.10 145 313 1.2E-54 T 22-04-2016 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 PANTHER PTHR10174 48 336 8.2E-58 T 22-04-2016 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.7E-25 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 PANTHER PTHR10174:SF2 48 336 8.2E-58 T 22-04-2016 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Gene3D G3DSA:3.40.50.720 1 144 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SMART SM00859 6 121 1.8E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SUPERFAMILY SSF55347 132 318 5.06E-53 T 22-04-2016 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 5.0E-35 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS14200 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SUPERFAMILY SSF51735 5 157 9.24E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00870 de229ffa7cb3f3d2063c57ac136fd858 292 Pfam PF11692 Protein of unknown function (DUF3289) 13 285 3.8E-119 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 YPTB_RS00870 de229ffa7cb3f3d2063c57ac136fd858 292 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 11 285 1.0E-147 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 YPTB_RS03930 ca1f41166baf7da78d53d76208115ee7 206 Gene3D G3DSA:3.40.50.300 2 197 2.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03930 ca1f41166baf7da78d53d76208115ee7 206 SUPERFAMILY SSF52540 1 190 3.58E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03930 ca1f41166baf7da78d53d76208115ee7 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.735 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YPTB_RS03930 ca1f41166baf7da78d53d76208115ee7 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 1.9E-63 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YPTB_RS03930 ca1f41166baf7da78d53d76208115ee7 206 Pfam PF01121 Dephospho-CoA kinase 3 177 2.2E-73 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YPTB_RS03930 ca1f41166baf7da78d53d76208115ee7 206 PANTHER PTHR10695 1 195 4.9E-82 T 22-04-2016 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.2E-51 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 PANTHER PTHR14021:SF15 1 174 1.8E-61 T 22-04-2016 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 Pfam PF00226 DnaJ domain 2 70 6.8E-7 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.23 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 2.7E-15 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 SMART SM00271 1 66 7.8E-9 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 Gene3D G3DSA:1.20.1280.20 81 171 3.4E-29 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 PANTHER PTHR14021 1 174 1.8E-61 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 SUPERFAMILY SSF47144 78 171 1.83E-24 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 Gene3D G3DSA:1.10.287.110 1 73 9.9E-27 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS15450 2ff4573fda8f888ee315c6325018bfd8 174 SUPERFAMILY SSF46565 1 74 3.53E-18 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 SMART SM00028 62 95 0.0033 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 SMART SM00028 96 129 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 PANTHER PTHR23083 31 38 1.4E-25 T 22-04-2016 YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 PANTHER PTHR23083 58 287 1.4E-25 T 22-04-2016 YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 SUPERFAMILY SSF48452 27 283 9.36E-75 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 PIRSF PIRSF004654 1 292 1.4E-116 T 22-04-2016 IPR023605 Lipoprotein NlpI YPTB_RS02775 cd9ae0fa8be8e53c473bfe648b2f363e 294 Gene3D G3DSA:1.25.40.10 49 288 1.3E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PANTHER PTHR11405 1 305 5.8E-145 T 22-04-2016 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 Gene3D G3DSA:3.40.50.1370 7 144 2.7E-52 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 Gene3D G3DSA:3.40.50.1370 145 292 4.4E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.709 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 SUPERFAMILY SSF53671 4 306 2.17E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 PANTHER PTHR11405:SF16 1 305 5.8E-145 T 22-04-2016 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.0E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 5.1E-119 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS19110 57cf1c9d207242c168a22a36e996545e 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 5.6E-28 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 SUPERFAMILY SSF52507 4 182 8.76E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 Pfam PF02441 Flavoprotein 8 136 8.9E-34 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 396 1.8E-163 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 SUPERFAMILY SSF102645 186 401 2.75E-80 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 PANTHER PTHR14359:SF20 5 401 3.1E-210 T 22-04-2016 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 370 2.2E-74 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 Gene3D G3DSA:3.40.50.1950 5 186 1.6E-68 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 PANTHER PTHR14359 5 401 3.1E-210 T 22-04-2016 YPTB_RS00325 748e7f716d7b5f36d3b2a845cc7b5143 405 Gene3D G3DSA:3.40.50.10300 187 403 9.1E-89 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YPTB_RS02655 90575a40710e47f704875be878136b3a 323 SUPERFAMILY SSF48576 6 322 2.59E-97 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPTB_RS02655 90575a40710e47f704875be878136b3a 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPTB_RS02655 90575a40710e47f704875be878136b3a 323 PANTHER PTHR12001 6 323 4.1E-126 T 22-04-2016 IPR017446 Polyprenyl synthetase-related YPTB_RS02655 90575a40710e47f704875be878136b3a 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPTB_RS02655 90575a40710e47f704875be878136b3a 323 Pfam PF00348 Polyprenyl synthetase 32 262 7.6E-75 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPTB_RS02655 90575a40710e47f704875be878136b3a 323 Gene3D G3DSA:1.10.600.10 3 322 1.5E-100 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPTB_RS02655 90575a40710e47f704875be878136b3a 323 PANTHER PTHR12001:SF47 6 323 4.1E-126 T 22-04-2016 YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 50.267 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 Pfam PF05175 Methyltransferase small domain 200 371 7.9E-53 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 PANTHER PTHR18895 80 394 5.9E-181 T 22-04-2016 YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 Gene3D G3DSA:3.40.50.150 198 373 1.3E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 PIRSF PIRSF037565 1 375 1.1E-166 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 PANTHER PTHR18895:SF6 80 394 5.9E-181 T 22-04-2016 YPTB_RS18785 d4891a9353477c5d85f48760fb099640 395 SUPERFAMILY SSF53335 190 370 1.61E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:3.40.190.10 276 388 5.3E-10 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PANTHER PTHR24423 32 49 2.3E-135 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PANTHER PTHR24423 544 1060 2.3E-135 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 903 916 5.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 862 872 5.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 858 5.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 897 5.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Pfam PF00512 His Kinase A (phospho-acceptor) domain 693 756 6.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SMART SM00387 803 919 9.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SUPERFAMILY SSF53850 38 256 2.5E-23 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:3.30.565.10 757 923 1.5E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:3.30.450.20 658 697 2.1E-4 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SUPERFAMILY SSF55874 745 917 1.57E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:3.40.50.2300 942 1060 6.3E-36 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PANTHER PTHR24423:SF382 32 49 2.3E-135 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 PANTHER PTHR24423:SF382 544 1060 2.3E-135 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Pfam PF00072 Response regulator receiver domain 947 1058 3.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:3.40.190.10 389 463 3.9E-11 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:1.20.120.160 1209 1253 1.7E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:1.20.120.160 1121 1155 1.7E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SMART SM00448 945 1059 4.0E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SUPERFAMILY SSF52172 943 1061 2.56E-34 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SMART SM00062 41 258 6.8E-41 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SMART SM00062 282 506 1.1E-16 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SUPERFAMILY SSF47226 1213 1276 9.03E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:1.10.287.130 698 752 2.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 806 918 3.1E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:3.40.190.10 218 258 1.6E-8 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Gene3D G3DSA:3.40.190.10 39 126 1.6E-8 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SUPERFAMILY SSF53850 275 504 1.37E-33 T 22-04-2016 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SUPERFAMILY SSF47384 677 757 1.06E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 256 9.0E-15 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 290 502 2.6E-26 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS10555 387dad509880eab7e141f990de4111c5 1289 SMART SM00388 692 756 1.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 Pfam PF00009 Elongation factor Tu GTP binding domain 29 230 5.3E-44 T 22-04-2016 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 22 478 52.985 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 86 101 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF50447 246 331 9.94E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF50465 338 438 3.21E-28 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 37 217 4.0E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 Gene3D G3DSA:2.40.30.10 246 361 2.3E-17 T 22-04-2016 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 31 437 1.1E-202 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 Gene3D G3DSA:3.40.50.300 23 238 5.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF52540 24 238 3.38E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 PANTHER PTHR23115 77 352 1.2E-70 T 22-04-2016 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 PANTHER PTHR23115 35 57 1.2E-70 T 22-04-2016 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 129 140 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 166 175 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 93 101 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 113 123 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS04260 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 32 45 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 Pfam PF02378 Phosphotransferase system, EIIC 12 324 4.7E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 529 649 3.8E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 PANTHER PTHR30009:SF4 4 507 2.6E-269 T 22-04-2016 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 SUPERFAMILY SSF51261 521 672 1.34E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 Gene3D G3DSA:2.70.70.10 521 670 2.5E-55 T 22-04-2016 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 482 4.0E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 Pfam PF00367 phosphotransferase system, EIIB 425 457 4.5E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 591 603 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 PANTHER PTHR30009 4 507 2.6E-269 T 22-04-2016 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 493 2.0E-202 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 Gene3D G3DSA:3.30.1360.60 420 496 1.6E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 529 652 2.9E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS06200 5752e973e7504f1aa86da2cbfb3be80d 677 SUPERFAMILY SSF55604 422 495 1.7E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS09080 bb12d50d4f3aeba30d1bf2096b86c522 199 Pfam PF00293 NUDIX domain 39 152 1.3E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS09080 bb12d50d4f3aeba30d1bf2096b86c522 199 ProSitePatterns PS01293 Nudix CoA signature. 56 76 - T 22-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 YPTB_RS09080 bb12d50d4f3aeba30d1bf2096b86c522 199 SUPERFAMILY SSF55811 27 194 6.91E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS09080 bb12d50d4f3aeba30d1bf2096b86c522 199 Gene3D G3DSA:3.90.79.10 36 196 2.5E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS09080 bb12d50d4f3aeba30d1bf2096b86c522 199 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 4 199 53.074 T 22-04-2016 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 YPTB_RS09080 bb12d50d4f3aeba30d1bf2096b86c522 199 PANTHER PTHR12992 9 197 1.5E-58 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00668 Condensation domain 112 409 7.4E-71 T 22-04-2016 IPR001242 Condensation domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00668 Condensation domain 1495 1778 7.3E-35 T 22-04-2016 IPR001242 Condensation domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF47336 21 124 3.89E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 296 536 1.11E-37 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF08242 Methyltransferase domain 1182 1279 3.3E-9 T 22-04-2016 IPR013217 Methyltransferase type 12 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF47336 1405 1475 5.61E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.30.300.30 962 1014 2.9E-30 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.30.300.30 1349 1413 2.9E-30 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.40.50.980 568 715 2.6E-34 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:1.10.1200.10 22 92 1.4E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:1.10.1200.10 1938 2015 4.2E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:1.10.1200.10 1414 1476 5.8E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:2.30.38.10 880 956 1.8E-22 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0012 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.12 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.40.50.150 1162 1289 3.8E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 117 289 1.56E-18 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF08415 Nonribosomal peptide synthase 431 486 3.2E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF08415 Nonribosomal peptide synthase 1802 1858 6.0E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.40.50.980 716 872 5.2E-42 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095:SF137 1337 1805 0.0 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095:SF137 22 1003 0.0 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 1489 1680 5.56E-20 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 1669 1908 5.0E-40 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00501 AMP-binding enzyme 575 965 5.1E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF47336 1946 2014 1.87E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF56801 549 1018 1.96E-137 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF56801 1344 1422 1.96E-137 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF53335 1164 1320 1.69E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 9.6E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 4.1E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 3.3E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 5.6E-119 T 22-04-2016 IPR010071 Amino acid adenylation domain YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095 1337 1805 0.0 T 22-04-2016 YPTB_RS08785 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095 22 1003 0.0 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 PANTHER PTHR30203:SF15 1 462 1.4E-195 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 Gene3D G3DSA:1.20.1600.10 348 461 4.6E-94 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 Gene3D G3DSA:1.20.1600.10 138 310 4.6E-94 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 Gene3D G3DSA:1.20.1600.10 47 85 4.6E-94 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 SUPERFAMILY SSF56954 2 462 1.31E-104 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 PANTHER PTHR30203 1 462 1.4E-195 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 Pfam PF02321 Outer membrane efflux protein 280 459 1.6E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 Pfam PF02321 Outer membrane efflux protein 60 250 7.6E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 461 6.1E-112 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 Gene3D G3DSA:2.20.200.10 95 137 6.6E-20 T 22-04-2016 YPTB_RS02815 855a64ba26f72554917b8c431d2d59e5 468 Gene3D G3DSA:2.20.200.10 311 346 6.6E-20 T 22-04-2016 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 PANTHER PTHR30602 1 441 0.0 T 22-04-2016 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 2.6E-201 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 PIRSF PIRSF000423 1 441 2.9E-211 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 SUPERFAMILY SSF55729 296 418 2.96E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 PANTHER PTHR30602:SF3 1 441 0.0 T 22-04-2016 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 Pfam PF00696 Amino acid kinase family 25 266 1.8E-31 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 Pfam PF00583 Acetyltransferase (GNAT) family 345 413 1.2E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 Gene3D G3DSA:3.40.1160.10 23 290 1.7E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 SUPERFAMILY SSF53633 4 290 4.19E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 240.354 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YPTB_RS16375 34c42364b2d6391d564660ffbf0c0294 441 Gene3D G3DSA:3.40.630.30 293 438 8.2E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10730 ae9751440d88d1456a579271f9a3770b 366 Pfam PF01699 Sodium/calcium exchanger protein 42 192 2.9E-13 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPTB_RS10730 ae9751440d88d1456a579271f9a3770b 366 Pfam PF01699 Sodium/calcium exchanger protein 223 363 1.7E-7 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPTB_RS10730 ae9751440d88d1456a579271f9a3770b 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 11 364 7.7E-103 T 22-04-2016 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS10730 ae9751440d88d1456a579271f9a3770b 366 PANTHER PTHR37958:SF1 7 366 1.2E-129 T 22-04-2016 YPTB_RS10730 ae9751440d88d1456a579271f9a3770b 366 PANTHER PTHR37958 7 366 1.2E-129 T 22-04-2016 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 Gene3D G3DSA:3.40.50.300 66 253 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 Gene3D G3DSA:3.40.50.300 294 311 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.417 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 22-04-2016 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.1E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 4.9E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 SUPERFAMILY SSF52540 63 402 1.21E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 PANTHER PTHR11262 10 413 8.3E-258 T 22-04-2016 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 SMART SM00994 12 51 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 4.8E-213 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 Gene3D G3DSA:1.10.8.60 316 413 1.1E-37 T 22-04-2016 YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 SMART SM01086 317 412 3.2E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS05320 96deaad13fbdd919d1d4a6349a1e72d3 423 SMART SM00382 111 333 6.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 PANTHER PTHR10000 1 273 1.1E-94 T 22-04-2016 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 6.2E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 Gene3D G3DSA:3.40.50.1000 176 272 8.7E-54 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 Gene3D G3DSA:3.40.50.1000 1 73 8.7E-54 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 2.6E-5 T 22-04-2016 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 2.6E-5 T 22-04-2016 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 2.6E-5 T 22-04-2016 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 5.1E-64 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 3.7E-24 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 PANTHER PTHR10000:SF8 1 273 1.1E-94 T 22-04-2016 YPTB_RS06540 04fffdbe1e3098a3c078bbbf9fdb40e2 273 SUPERFAMILY SSF56784 1 271 1.17E-67 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SUPERFAMILY SSF52540 779 987 5.92E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Gene3D G3DSA:3.30.2060.10 130 207 1.8E-13 T 22-04-2016 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SMART SM01058 476 573 6.0E-51 T 22-04-2016 IPR003711 CarD-like/TRCF domain YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SUPERFAMILY SSF52540 520 780 2.45E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 7.9E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SMART SM00490 823 907 1.4E-19 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SMART SM00982 1005 1105 1.2E-47 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 PANTHER PTHR14025 383 1139 0.0 T 22-04-2016 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SMART SM00487 597 787 6.0E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SUPERFAMILY SSF52540 8 341 4.69E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Pfam PF03461 TRCF domain 1007 1097 2.2E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 PANTHER PTHR14025:SF21 383 1139 0.0 T 22-04-2016 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SUPERFAMILY SSF141259 468 545 5.36E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Gene3D G3DSA:3.40.50.300 794 960 5.0E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 7.9E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SUPERFAMILY SSF143517 992 1144 6.93E-44 T 22-04-2016 YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Gene3D G3DSA:3.40.50.300 584 783 3.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 SUPERFAMILY SSF52540 351 463 3.08E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 2.2E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS13285 eced8581135bc5477fc582e694266d2f 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1138 28.598 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 Pfam PF09339 IclR helix-turn-helix domain 29 79 4.1E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 SUPERFAMILY SSF55781 98 274 3.99E-50 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 Gene3D G3DSA:3.30.450.40 99 274 2.9E-58 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 Gene3D G3DSA:1.10.10.10 16 88 9.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 SUPERFAMILY SSF46785 27 100 6.83E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 Pfam PF01614 Bacterial transcriptional regulator 148 271 1.5E-39 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 PANTHER PTHR30136:SF3 1 275 1.3E-103 T 22-04-2016 YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 SMART SM00346 27 117 6.5E-34 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YPTB_RS19755 ce25650ab514050a9886fba0cb58b245 280 PANTHER PTHR30136 1 275 1.3E-103 T 22-04-2016 YPTB_RS19515 717439aea833bd4ce27779badafdbf3b 167 Gene3D G3DSA:3.40.1650.10 2 129 1.3E-21 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPTB_RS19515 717439aea833bd4ce27779badafdbf3b 167 PANTHER PTHR31690 1 139 3.2E-57 T 22-04-2016 YPTB_RS19515 717439aea833bd4ce27779badafdbf3b 167 PANTHER PTHR31690:SF6 1 139 3.2E-57 T 22-04-2016 YPTB_RS19515 717439aea833bd4ce27779badafdbf3b 167 Pfam PF05025 RbsD / FucU transport protein family 1 130 6.9E-30 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 YPTB_RS19515 717439aea833bd4ce27779badafdbf3b 167 SUPERFAMILY SSF102546 1 129 7.19E-31 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPTB_RS16290 fdf5ba87c49bac44ab534c5ae1e0470c 110 SUPERFAMILY SSF158452 1 108 9.29E-39 T 22-04-2016 IPR023376 YqcC-like domain YPTB_RS16290 fdf5ba87c49bac44ab534c5ae1e0470c 110 PANTHER PTHR39586 2 110 4.5E-45 T 22-04-2016 YPTB_RS16290 fdf5ba87c49bac44ab534c5ae1e0470c 110 PIRSF PIRSF006257 1 109 1.1E-44 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 YPTB_RS16290 fdf5ba87c49bac44ab534c5ae1e0470c 110 Pfam PF04287 tRNA pseudouridine synthase C 7 104 1.7E-34 T 22-04-2016 IPR023376 YqcC-like domain YPTB_RS16290 fdf5ba87c49bac44ab534c5ae1e0470c 110 Gene3D G3DSA:1.20.1440.40 1 106 4.9E-41 T 22-04-2016 IPR023376 YqcC-like domain YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.134 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 PANTHER PTHR30327:SF1 1 187 2.3E-73 T 22-04-2016 YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.1E-48 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 SUPERFAMILY SSF143456 1 187 1.7E-64 T 22-04-2016 YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 Gene3D G3DSA:3.40.1740.10 131 177 4.7E-36 T 22-04-2016 YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 Gene3D G3DSA:3.40.1740.10 2 40 4.7E-36 T 22-04-2016 YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 Gene3D G3DSA:3.30.70.1300 41 130 2.3E-26 T 22-04-2016 YPTB_RS17380 02b4681338df9716f8e1264198c9afeb 187 PANTHER PTHR30327 1 187 2.3E-73 T 22-04-2016 YPTB_RS15980 af45e980ff3a1632573fc7a9fed53953 78 SUPERFAMILY SSF52833 1 72 3.43E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15980 af45e980ff3a1632573fc7a9fed53953 78 Gene3D G3DSA:3.40.30.10 1 75 9.9E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15980 af45e980ff3a1632573fc7a9fed53953 78 Pfam PF00462 Glutaredoxin 3 61 7.3E-15 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPTB_RS15980 af45e980ff3a1632573fc7a9fed53953 78 PANTHER PTHR34386 1 75 8.5E-41 T 22-04-2016 YPTB_RS15980 af45e980ff3a1632573fc7a9fed53953 78 PANTHER PTHR34386:SF3 1 75 8.5E-41 T 22-04-2016 YPTB_RS15980 af45e980ff3a1632573fc7a9fed53953 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 6.4E-35 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 YPTB_RS03215 a3a59a445bc3fbbb92946c2685fc1ccf 361 Gene3D G3DSA:2.160.20.10 26 359 7.3E-96 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS03215 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321 285 358 7.4E-91 T 22-04-2016 YPTB_RS03215 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321 15 268 7.4E-91 T 22-04-2016 YPTB_RS03215 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321:SF1 285 358 7.4E-91 T 22-04-2016 YPTB_RS03215 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321:SF1 15 268 7.4E-91 T 22-04-2016 YPTB_RS03215 a3a59a445bc3fbbb92946c2685fc1ccf 361 SUPERFAMILY SSF51126 28 357 3.14E-60 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS03215 a3a59a445bc3fbbb92946c2685fc1ccf 361 Pfam PF01095 Pectinesterase 31 335 3.1E-38 T 22-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 YPTB_RS11355 28876950a3b7bf17719f8876883d2e47 511 PANTHER PTHR30029 10 511 7.7E-248 T 22-04-2016 YPTB_RS11355 28876950a3b7bf17719f8876883d2e47 511 Pfam PF04293 SpoVR like protein 20 451 1.6E-176 T 22-04-2016 IPR007390 Sporulation stage V, protein R YPTB_RS11355 28876950a3b7bf17719f8876883d2e47 511 PANTHER PTHR30029:SF2 10 511 7.7E-248 T 22-04-2016 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:1.10.1140.10 345 460 1.0E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:2.40.10.170 2 75 2.6E-31 T 22-04-2016 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.4E-262 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.822 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF52540 77 348 1.24E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF47917 345 459 2.09E-55 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:3.40.50.300 77 343 2.2E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 SMART SM00382 142 405 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF50615 1 75 2.56E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 PANTHER PTHR15184 1 460 0.0 T 22-04-2016 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.0E-21 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 PANTHER PTHR15184:SF44 1 460 0.0 T 22-04-2016 YPTB_RS21410 2b32ffa9c31bb7bae135c232a781652c 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS00715 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 214 227 3.8E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS00715 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 228 241 3.8E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS00715 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 173 191 3.8E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS00715 b00f288991552a5971333049b6c74594 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YPTB_RS00715 b00f288991552a5971333049b6c74594 243 SUPERFAMILY SSF52833 2 242 2.17E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS00715 b00f288991552a5971333049b6c74594 243 Gene3D G3DSA:3.40.30.10 2 163 3.1E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS00715 b00f288991552a5971333049b6c74594 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 9.5E-40 T 22-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 YPTB_RS00715 b00f288991552a5971333049b6c74594 243 PANTHER PTHR10430:SF19 1 168 6.6E-111 T 22-04-2016 YPTB_RS00715 b00f288991552a5971333049b6c74594 243 PANTHER PTHR10430 1 168 6.6E-111 T 22-04-2016 YPTB_RS00715 b00f288991552a5971333049b6c74594 243 Pfam PF00462 Glutaredoxin 173 231 1.1E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPTB_RS00715 b00f288991552a5971333049b6c74594 243 Gene3D G3DSA:3.40.30.10 169 241 5.7E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS00715 b00f288991552a5971333049b6c74594 243 Pfam PF08534 Redoxin 5 160 6.3E-33 T 22-04-2016 IPR013740 Redoxin GO:0016491 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 SMART SM00411 1 90 2.5E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 SUPERFAMILY SSF47729 1 90 9.13E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 Gene3D G3DSA:4.10.520.10 1 90 2.1E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 PANTHER PTHR33175 1 90 2.4E-44 T 22-04-2016 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS05330 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 22-04-2016 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 22-04-2016 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.1E-170 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 22-04-2016 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 PANTHER PTHR19375 9 336 1.5E-190 T 22-04-2016 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 Pfam PF06723 MreB/Mbl protein 11 338 9.6E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.90.640.10 191 263 6.8E-30 T 22-04-2016 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 PANTHER PTHR19375:SF117 9 336 1.5E-190 T 22-04-2016 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 22-04-2016 YPTB_RS19280 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 153 340 4.08E-50 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Pfam PF01553 Acyltransferase 24 136 6.4E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Pfam PF13193 AMP-binding enzyme C-terminal domain 630 701 2.3E-5 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 SMART SM00563 30 140 9.4E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 PANTHER PTHR24096:SF177 124 707 0.0 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 PANTHER PTHR24096 124 707 0.0 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 59.806 T 22-04-2016 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Gene3D G3DSA:3.40.50.980 377 533 5.9E-39 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Gene3D G3DSA:3.40.50.980 230 376 6.5E-17 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Gene3D G3DSA:2.30.38.10 534 609 3.7E-13 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 SUPERFAMILY SSF56801 205 714 1.15E-97 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Pfam PF00501 AMP-binding enzyme 232 619 7.3E-66 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 Gene3D G3DSA:3.30.300.30 617 713 3.0E-8 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 SUPERFAMILY SSF69593 10 164 7.06E-18 T 22-04-2016 YPTB_RS16480 d9d54ecb6033136d48ba7311ea875f87 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 Gene3D G3DSA:3.40.50.2300 1 133 4.4E-38 T 22-04-2016 YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 SUPERFAMILY SSF52172 1 175 1.34E-38 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 SMART SM00448 1 112 2.4E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 Pfam PF00072 Response regulator receiver domain 3 112 3.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 PANTHER PTHR26402:SF537 1 223 9.6E-162 T 22-04-2016 YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 Gene3D G3DSA:1.10.10.10 134 222 3.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 PANTHER PTHR26402 1 223 9.6E-162 T 22-04-2016 YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 2.8E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS13240 6a1a8190fc03a3352209ff6fb17ddbb6 223 SMART SM00862 145 220 1.6E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 SUPERFAMILY SSF46894 115 185 2.41E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 184 3.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 Gene3D G3DSA:1.10.10.10 129 184 1.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 SMART SM00421 127 184 6.3E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 144 171 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 160 2.1E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 172 2.1E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14520 501153da0d04d81cb0998b0f0da1af0f 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 144 2.1E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 SMART SM00342 148 231 5.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 PANTHER PTHR11019 133 231 3.7E-27 T 22-04-2016 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 Gene3D G3DSA:1.10.10.60 186 231 6.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 Gene3D G3DSA:1.10.10.60 136 185 6.5E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 SUPERFAMILY SSF46689 185 232 4.17E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 Pfam PF12833 Helix-turn-helix domain 154 231 1.2E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 PANTHER PTHR11019:SF60 133 231 3.7E-27 T 22-04-2016 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS01875 b782d5b08c98f3057a93577ae8222cf5 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 SMART SM00382 280 474 1.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 SMART SM00382 29 217 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 SUPERFAMILY SSF52540 3 227 6.41E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 PANTHER PTHR24220 6 380 1.4E-282 T 22-04-2016 YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 Gene3D G3DSA:3.40.50.300 258 485 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 PANTHER PTHR24220:SF440 6 380 1.4E-282 T 22-04-2016 YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 SUPERFAMILY SSF52540 263 484 8.13E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 Gene3D G3DSA:3.40.50.300 2 229 6.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 Pfam PF00005 ABC transporter 20 169 4.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 Pfam PF00005 ABC transporter 272 425 9.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS00800 177a169a9cc3814505ba8ef073a7c315 496 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04546 Sigma-70, non-essential region 139 347 2.9E-74 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.10.10 451 502 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.10.10 542 611 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88659 508 610 2.32E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.601.10 112 447 8.1E-138 T 22-04-2016 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88659 451 524 1.54E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603:SF0 325 611 6.0E-253 T 22-04-2016 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603:SF0 1 152 6.0E-253 T 22-04-2016 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 3.5E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88946 115 445 2.35E-102 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 611 46.659 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.4E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04545 Sigma-70, region 4 546 599 8.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 7.8E-121 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603 325 611 6.0E-253 T 22-04-2016 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603 1 152 6.0E-253 T 22-04-2016 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04539 Sigma-70 region 3 457 532 3.4E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS18475 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 1.7E-30 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 PIRSF PIRSF000368 1 154 8.6E-59 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 PANTHER PTHR30352:SF2 1 151 5.5E-75 T 22-04-2016 YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.3E-51 T 22-04-2016 YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 PANTHER PTHR30352 1 151 5.5E-75 T 22-04-2016 YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 Gene3D G3DSA:3.20.20.70 22 129 5.2E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 SUPERFAMILY SSF102114 23 111 1.71E-6 T 22-04-2016 YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YPTB_RS02950 f4f839a9cfb1e8c882b033fc012bd8b5 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 151 9.5E-63 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 SUPERFAMILY SSF48179 204 384 6.12E-47 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 2.2E-25 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 Gene3D G3DSA:1.10.1040.10 203 384 7.0E-49 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 Gene3D G3DSA:3.40.50.720 2 202 2.4E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 372 2.8E-64 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 PANTHER PTHR30524 1 385 1.9E-221 T 22-04-2016 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 SUPERFAMILY SSF51735 1 203 4.67E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 PANTHER PTHR30524:SF0 1 385 1.9E-221 T 22-04-2016 YPTB_RS21160 1b85680f0ff1bb97d6852d5a522134d8 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.626 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 PIRSF PIRSF004983 1 564 2.8E-178 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 394 3.2E-88 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 2.2E-27 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 559 32.614 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 SUPERFAMILY SSF52518 369 559 8.04E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 Gene3D G3DSA:3.40.50.970 348 554 2.2E-30 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 436 8.0E-142 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 541 8.5E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 Gene3D G3DSA:3.40.50.970 7 180 9.3E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 PANTHER PTHR18968:SF114 1 559 3.5E-237 T 22-04-2016 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 PANTHER PTHR18968 1 559 3.5E-237 T 22-04-2016 YPTB_RS13890 d77b0d111324ef46d86cac9d2f656788 567 SUPERFAMILY SSF52518 7 176 5.35E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS16810 1ded549f15d2589b0abe3b8fc18999dc 226 SUPERFAMILY SSF46785 63 184 8.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16810 1ded549f15d2589b0abe3b8fc18999dc 226 Gene3D G3DSA:1.10.10.10 52 155 2.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16810 1ded549f15d2589b0abe3b8fc18999dc 226 Pfam PF03551 Transcriptional regulator PadR-like family 68 137 4.9E-19 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal YPTB_RS16810 1ded549f15d2589b0abe3b8fc18999dc 226 PANTHER PTHR33169:SF2 51 211 6.8E-65 T 22-04-2016 YPTB_RS16810 1ded549f15d2589b0abe3b8fc18999dc 226 PANTHER PTHR33169 51 211 6.8E-65 T 22-04-2016 YPTB_RS01170 766db65af0109411f979241e7050a3a6 238 Gene3D G3DSA:3.40.50.1000 106 238 2.2E-29 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01170 766db65af0109411f979241e7050a3a6 238 Gene3D G3DSA:3.40.50.1000 10 45 3.4E-5 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01170 766db65af0109411f979241e7050a3a6 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 201 5.9E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS01170 766db65af0109411f979241e7050a3a6 238 PANTHER PTHR12725:SF65 1 238 9.7E-85 T 22-04-2016 YPTB_RS01170 766db65af0109411f979241e7050a3a6 238 PANTHER PTHR12725 1 238 9.7E-85 T 22-04-2016 YPTB_RS01170 766db65af0109411f979241e7050a3a6 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 119 207 6.1E-9 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01170 766db65af0109411f979241e7050a3a6 238 SUPERFAMILY SSF56784 10 238 6.85E-40 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 PIRSF PIRSF004750 6 281 3.3E-125 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 Pfam PF14489 QueF-like protein 195 269 1.1E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 2.6E-47 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 SUPERFAMILY SSF55620 185 266 6.52E-10 T 22-04-2016 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 6.1E-127 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 PANTHER PTHR34354:SF1 2 281 8.0E-112 T 22-04-2016 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.428 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 Gene3D G3DSA:3.30.1130.10 21 137 1.2E-41 T 22-04-2016 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 PANTHER PTHR34354 2 281 8.0E-112 T 22-04-2016 YPTB_RS16305 9cbc6e8eeee5d66222b247e8b6ce563b 281 Gene3D G3DSA:3.30.1130.10 145 279 1.5E-55 T 22-04-2016 YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 Gene3D G3DSA:2.40.50.100 204 235 2.5E-11 T 22-04-2016 YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 Gene3D G3DSA:2.40.50.100 44 77 2.5E-11 T 22-04-2016 YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 52.634 T 22-04-2016 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 PANTHER PTHR32347 6 325 2.6E-78 T 22-04-2016 YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 SUPERFAMILY SSF111369 179 325 2.48E-13 T 22-04-2016 YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 292 2.9E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 PANTHER PTHR32347:SF12 6 325 2.6E-78 T 22-04-2016 YPTB_RS06715 71ea83a902df949c7b3b873a07d28c46 328 SUPERFAMILY SSF111369 41 102 7.19E-8 T 22-04-2016 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 5.0E-227 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:1.10.730.10 645 830 9.4E-66 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:1.10.287.380 892 950 1.1E-7 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF50677 205 379 1.44E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 1.1E-43 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PANTHER PTHR11946 622 874 0.0 T 22-04-2016 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PANTHER PTHR11946 894 956 0.0 T 22-04-2016 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PANTHER PTHR11946 6 584 0.0 T 22-04-2016 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 945 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 958 5.3E-17 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF46589 898 962 7.32E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF52374 378 585 6.05E-137 T 22-04-2016 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF52374 14 206 6.05E-137 T 22-04-2016 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF52374 623 655 6.05E-137 T 22-04-2016 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:3.40.50.620 378 585 7.0E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:3.40.50.620 623 644 7.0E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:3.40.50.620 17 207 7.0E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.213 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:3.90.740.10 208 374 1.3E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PANTHER PTHR11946:SF5 622 874 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PANTHER PTHR11946:SF5 894 956 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PANTHER PTHR11946:SF5 6 584 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPTB_RS03005 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF47323 656 913 4.86E-72 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 PIRSF PIRSF001467 1 164 2.8E-29 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 Gene3D G3DSA:2.40.100.10 2 162 4.5E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 PANTHER PTHR11071 1 164 1.6E-84 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 PANTHER PTHR11071:SF192 1 164 1.6E-84 T 22-04-2016 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.1E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.1E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.1E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 2.9E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS05700 a48298f45699905d85ede1289c3be480 164 SUPERFAMILY SSF50891 1 162 2.48E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.420.10 587 710 1.6E-46 T 22-04-2016 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 17 735 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.520.10 51 247 2.0E-70 T 22-04-2016 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 ProSitePatterns PS00436 Peroxidases active site signature. 94 105 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 SUPERFAMILY SSF48113 31 428 1.22E-141 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Pfam PF00141 Peroxidase 401 709 1.8E-36 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Pfam PF00141 Peroxidase 81 393 9.9E-51 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 256 266 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Hamap MF_01961 Catalase-peroxidase [katG]. 13 735 40.217 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 SUPERFAMILY SSF48113 428 734 2.95E-107 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 172 184 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 94 108 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 154 171 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 640 655 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PANTHER PTHR30555 5 737 0.0 T 22-04-2016 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PANTHER PTHR30555:SF5 5 737 0.0 T 22-04-2016 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.420.10 248 271 1.1E-45 T 22-04-2016 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.420.10 308 405 1.1E-45 T 22-04-2016 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 30 52 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 71 96 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 56 69 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.520.10 713 734 1.4E-62 T 22-04-2016 YPTB_RS04495 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.520.10 430 586 1.4E-62 T 22-04-2016 YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 SUPERFAMILY SSF50800 147 263 1.36E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 SUPERFAMILY SSF50800 4 50 1.36E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 SUPERFAMILY SSF141673 4 132 6.02E-29 T 22-04-2016 YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 322 330 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 4.3E-29 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 Pfam PF03473 MOSC domain 139 261 2.7E-28 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 SUPERFAMILY SSF54292 282 366 1.13E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 298 361 2.0E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 Gene3D G3DSA:3.10.20.30 281 366 1.9E-19 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS07950 bc2a8446826a84e5ca0b837f3ddcf110 369 PANTHER PTHR14237 1 266 7.8E-101 T 22-04-2016 YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 PANTHER PTHR11921 3 239 2.7E-102 T 22-04-2016 YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 SUPERFAMILY SSF46548 107 229 7.32E-32 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.8E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 Gene3D G3DSA:3.10.20.30 3 106 2.4E-34 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 3.0E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 SUPERFAMILY SSF54292 4 106 7.01E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 3.2E-97 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPTB_RS02365 52d71e950d3f2b92764c013c05131342 244 Gene3D G3DSA:1.10.1060.10 107 230 7.9E-37 T 22-04-2016 YPTB_RS18600 78cc50a72b93a0598d1aa357c91396b1 633 PANTHER PTHR30509 39 633 1.1E-292 T 22-04-2016 YPTB_RS18600 78cc50a72b93a0598d1aa357c91396b1 633 Pfam PF04632 Fusaric acid resistance protein family 285 524 1.0E-25 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 YPTB_RS18600 78cc50a72b93a0598d1aa357c91396b1 633 PANTHER PTHR30509:SF3 39 633 1.1E-292 T 22-04-2016 YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 Pfam PF00664 ABC transporter transmembrane region 34 291 4.0E-7 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 Pfam PF00005 ABC transporter 361 510 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 Gene3D G3DSA:3.40.50.300 344 575 1.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 SUPERFAMILY SSF90123 17 331 5.36E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 SMART SM00382 370 562 6.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 Gene3D G3DSA:1.20.1560.10 17 331 6.3E-34 T 22-04-2016 YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 SUPERFAMILY SSF52540 339 581 1.51E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 PANTHER PTHR24222 1 597 0.0 T 22-04-2016 YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 PANTHER PTHR24222:SF25 1 597 0.0 T 22-04-2016 YPTB_RS08800 f2e5a45957cb26eed9f37736c4780f5d 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS05075 37218b3e298d82deeebf9b57c973edb8 304 PANTHER PTHR18964 3 299 2.3E-103 T 22-04-2016 YPTB_RS05075 37218b3e298d82deeebf9b57c973edb8 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family YPTB_RS05075 37218b3e298d82deeebf9b57c973edb8 304 Gene3D G3DSA:3.30.420.40 2 131 3.6E-35 T 22-04-2016 YPTB_RS05075 37218b3e298d82deeebf9b57c973edb8 304 SUPERFAMILY SSF53067 2 300 5.81E-60 T 22-04-2016 YPTB_RS05075 37218b3e298d82deeebf9b57c973edb8 304 Pfam PF00480 ROK family 3 300 4.1E-84 T 22-04-2016 IPR000600 ROK family YPTB_RS05075 37218b3e298d82deeebf9b57c973edb8 304 PANTHER PTHR18964:SF123 3 299 2.3E-103 T 22-04-2016 YPTB_RS05075 37218b3e298d82deeebf9b57c973edb8 304 Gene3D G3DSA:3.30.420.40 132 280 9.4E-47 T 22-04-2016 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 431 512 6.1E-22 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 Gene3D G3DSA:1.20.272.10 243 362 6.9E-49 T 22-04-2016 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.7E-42 T 22-04-2016 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 3.0E-134 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 Gene3D G3DSA:3.40.50.300 15 166 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 PANTHER PTHR11669:SF0 1 436 7.1E-183 T 22-04-2016 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 SUPERFAMILY SSF52540 35 222 1.98E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 SMART SM00382 37 178 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 514 655 2.2E-60 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 SUPERFAMILY SSF48019 243 367 1.87E-35 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 8.9E-32 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 PANTHER PTHR11669 1 436 7.1E-183 T 22-04-2016 YPTB_RS05480 e85b470eafdfd65054a943e5aad39b7e 658 Gene3D G3DSA:1.10.8.60 167 242 1.3E-31 T 22-04-2016 YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 123 22.235 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 SUPERFAMILY SSF89919 2 110 2.62E-31 T 22-04-2016 IPR023799 Ribosome-binding factor A domain YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 Pfam PF02033 Ribosome-binding factor A 7 115 5.9E-30 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 PANTHER PTHR33515 1 136 7.1E-52 T 22-04-2016 YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 1.6E-40 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 Gene3D G3DSA:3.30.300.20 4 123 6.6E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPTB_RS02755 6f005a089d5e761571dd5b3ecf6063d1 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 6.0E-50 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPTB_RS05145 bccf4dc457fecf5eff86f2c29a3ced77 193 PANTHER PTHR38764:SF1 2 193 4.9E-93 T 22-04-2016 YPTB_RS05145 bccf4dc457fecf5eff86f2c29a3ced77 193 PANTHER PTHR38764 2 193 4.9E-93 T 22-04-2016 YPTB_RS05145 bccf4dc457fecf5eff86f2c29a3ced77 193 Pfam PF04336 Protein of unknown function, DUF479 81 185 2.1E-31 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YPTB_RS05145 bccf4dc457fecf5eff86f2c29a3ced77 193 PIRSF PIRSF011489 1 193 2.6E-78 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YPTB_RS05145 bccf4dc457fecf5eff86f2c29a3ced77 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 58.179 T 22-04-2016 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YPTB_RS00280 95887177c283af69ca7efab5965e76e3 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-28 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS00280 95887177c283af69ca7efab5965e76e3 91 Gene3D G3DSA:3.90.940.10 1 78 2.3E-16 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS00280 95887177c283af69ca7efab5965e76e3 91 SMART SM01409 8 61 1.0E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS00280 95887177c283af69ca7efab5965e76e3 91 Pfam PF01192 RNA polymerase Rpb6 10 60 7.2E-17 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS00280 95887177c283af69ca7efab5965e76e3 91 PANTHER PTHR34476 2 91 6.9E-32 T 22-04-2016 YPTB_RS00280 95887177c283af69ca7efab5965e76e3 91 SUPERFAMILY SSF63562 1 79 2.44E-25 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS00280 95887177c283af69ca7efab5965e76e3 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.134 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 SUPERFAMILY SSF51735 1 154 3.96E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 Gene3D G3DSA:3.40.50.720 1 163 4.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 9.5E-185 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.406 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 SUPERFAMILY SSF55347 155 317 4.46E-54 T 22-04-2016 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 SMART SM00846 3 155 3.0E-78 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PIRSF PIRSF000149 1 337 5.5E-128 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PANTHER PTHR10836:SF47 1 335 9.6E-256 T 22-04-2016 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 Gene3D G3DSA:3.30.360.10 164 318 2.0E-57 T 22-04-2016 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PANTHER PTHR10836 1 335 9.6E-256 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 3.4E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS17320 a5e1f37b1fc95de0696db3199471c9af 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 6.0E-51 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 492 3.8E-200 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 Gene3D G3DSA:3.30.360.10 189 490 1.2E-121 T 22-04-2016 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 Gene3D G3DSA:3.40.50.720 10 188 4.5E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 491 1.3E-115 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 1.2E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 1.2E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 1.2E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 1.2E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 1.2E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 SUPERFAMILY SSF51735 4 192 5.77E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 SUPERFAMILY SSF55347 179 491 5.56E-113 T 22-04-2016 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PANTHER PTHR23429 4 492 4.9E-231 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 12 492 91.621 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PANTHER PTHR23429:SF0 4 492 4.9E-231 T 22-04-2016 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 PIRSF PIRSF000110 1 494 2.9E-183 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS11230 54e036a702cfd50d244e90f03126030c 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 16 189 3.2E-59 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 Gene3D G3DSA:3.40.50.620 3 237 9.5E-105 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 3.5E-144 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.1E-91 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 Gene3D G3DSA:3.10.290.10 322 423 2.5E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 PANTHER PTHR11766 4 424 9.5E-223 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 Pfam PF01479 S4 domain 359 400 2.4E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 SUPERFAMILY SSF52374 4 328 7.42E-109 T 22-04-2016 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 SMART SM00363 357 419 0.0049 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 Gene3D G3DSA:1.10.240.10 238 321 7.4E-42 T 22-04-2016 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 SUPERFAMILY SSF55174 327 423 1.1E-20 T 22-04-2016 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.08 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 YPTB_RS12440 3bdc7ed401d50f3c043d44b9625a3564 424 PANTHER PTHR11766:SF0 4 424 9.5E-223 T 22-04-2016 YPTB_RS09295 0789193f7ef09554d1948a020f837717 319 PANTHER PTHR10584:SF166 1 292 1.5E-62 T 22-04-2016 YPTB_RS09295 0789193f7ef09554d1948a020f837717 319 Pfam PF00294 pfkB family carbohydrate kinase 1 294 2.7E-52 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS09295 0789193f7ef09554d1948a020f837717 319 SUPERFAMILY SSF53613 1 302 7.02E-69 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS09295 0789193f7ef09554d1948a020f837717 319 Gene3D G3DSA:3.40.1190.20 1 309 1.2E-69 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS09295 0789193f7ef09554d1948a020f837717 319 PANTHER PTHR10584 1 292 1.5E-62 T 22-04-2016 YPTB_RS08505 5ba92aade0cec4021074498acc60d865 346 Gene3D G3DSA:1.10.3470.10 7 337 7.2E-87 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS08505 5ba92aade0cec4021074498acc60d865 346 PANTHER PTHR30472:SF31 3 342 2.8E-180 T 22-04-2016 YPTB_RS08505 5ba92aade0cec4021074498acc60d865 346 Pfam PF01032 FecCD transport family 23 334 3.3E-77 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS08505 5ba92aade0cec4021074498acc60d865 346 PANTHER PTHR30472 3 342 2.8E-180 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS08505 5ba92aade0cec4021074498acc60d865 346 SUPERFAMILY SSF81345 6 331 1.15E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 PANTHER PTHR30290 1 353 4.2E-263 T 22-04-2016 YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 PANTHER PTHR30290 380 600 4.2E-263 T 22-04-2016 YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 PANTHER PTHR30290:SF2 1 353 4.2E-263 T 22-04-2016 YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 PANTHER PTHR30290:SF2 380 600 4.2E-263 T 22-04-2016 YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 SUPERFAMILY SSF53850 50 591 2.63E-116 T 22-04-2016 YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 PIRSF PIRSF002741 5 593 3.3E-147 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 Gene3D G3DSA:3.10.105.10 321 560 1.2E-52 T 22-04-2016 YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 502 8.5E-77 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS07240 fd88f641816927da9f657133bbe990a4 602 Gene3D G3DSA:3.40.190.10 159 320 8.2E-33 T 22-04-2016 YPTB_RS14440 1bebe059c5fc59a23d59b04e6584b110 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 494 8.5E-191 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS14440 1bebe059c5fc59a23d59b04e6584b110 500 PANTHER PTHR35565 1 499 0.0 T 22-04-2016 YPTB_RS14440 1bebe059c5fc59a23d59b04e6584b110 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 494 9.3E-218 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS14440 1bebe059c5fc59a23d59b04e6584b110 500 PANTHER PTHR35565:SF3 1 499 0.0 T 22-04-2016 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 5.5E-28 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 PANTHER PTHR30244 2 172 3.0E-113 T 22-04-2016 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 PANTHER PTHR30244 206 399 3.0E-113 T 22-04-2016 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 Pfam PF00700 Bacterial flagellin C-terminal helical region 315 397 9.4E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 PRINTS PR00207 Flagellin signature 76 95 3.4E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 PRINTS PR00207 Flagellin signature 37 54 3.4E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 PRINTS PR00207 Flagellin signature 111 134 3.4E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 SUPERFAMILY SSF64518 1 399 2.75E-71 T 22-04-2016 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 Gene3D G3DSA:1.20.1330.10 55 174 2.5E-34 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 Gene3D G3DSA:1.20.1330.10 301 354 2.5E-34 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 PANTHER PTHR30244:SF1 2 172 3.0E-113 T 22-04-2016 YPTB_RS17990 17204c01e1e9bd28cd240aa249eefc0b 400 PANTHER PTHR30244:SF1 206 399 3.0E-113 T 22-04-2016 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.1E-90 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.9E-32 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 PANTHER PTHR11921 4 236 3.9E-135 T 22-04-2016 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 PANTHER PTHR11921:SF29 4 236 3.9E-135 T 22-04-2016 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 Gene3D G3DSA:3.10.20.30 1 106 2.2E-37 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 Gene3D G3DSA:1.10.1060.10 108 236 2.8E-47 T 22-04-2016 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 SUPERFAMILY SSF46548 107 236 9.59E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 1.2E-9 T 22-04-2016 YPTB_RS06335 824628d2578f7787a8e0db6a45862640 238 SUPERFAMILY SSF54292 1 106 4.18E-31 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 PANTHER PTHR11624 41 310 2.3E-77 T 22-04-2016 IPR033247 Transketolase family YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 Gene3D G3DSA:3.40.50.970 21 181 7.9E-39 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 Pfam PF02780 Transketolase, C-terminal domain 181 303 4.4E-29 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 Pfam PF02779 Transketolase, pyrimidine binding domain 44 167 2.2E-18 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 SUPERFAMILY SSF52922 176 311 1.2E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 SMART SM00861 1 171 7.2E-30 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 PANTHER PTHR11624:SF2 41 310 2.3E-77 T 22-04-2016 YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 SUPERFAMILY SSF52518 6 173 3.93E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS04525 6929a733605e7d76e14bf7523e868cb6 314 Gene3D G3DSA:3.40.50.920 182 310 9.5E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF53738 153 261 7.46E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF53738 4 176 2.06E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.30.310.50 374 456 2.9E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.40.120.10 6 148 1.3E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 453 8.6E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 PANTHER PTHR22573 7 456 3.2E-186 T 22-04-2016 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF53738 263 368 9.03E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.40.120.10 256 368 1.5E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 371 3.5E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 PANTHER PTHR22573:SF18 7 456 3.2E-186 T 22-04-2016 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 258 3.4E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF55957 373 456 3.92E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 132 7.1E-30 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS05590 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.40.120.10 172 254 2.4E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PANTHER PTHR21237 14 192 1.4E-60 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Gene3D G3DSA:3.90.20.20 44 132 1.9E-29 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 SUPERFAMILY SSF51064 134 190 1.57E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Gene3D G3DSA:2.30.22.10 133 191 1.5E-25 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Pfam PF01025 GrpE 16 189 6.4E-47 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 168 187 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 86 101 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 58 74 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 141 156 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Hamap MF_01151 Protein GrpE [grpE]. 4 189 21.315 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPTB_RS06310 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 SUPERFAMILY SSF58014 44 133 3.01E-26 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 SUPERFAMILY SSF57783 751 813 3.57E-19 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 764 799 3.5E-12 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 869 7.4E-24 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:2.70.20.10 344 479 2.4E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:2.70.20.10 219 339 3.3E-30 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:3.30.65.10 603 632 3.4E-11 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:3.30.65.10 751 812 1.4E-26 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:3.30.65.10 714 749 2.8E-11 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 729 55.124 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 SMART SM00436 139 227 1.0E-47 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Pfam PF01751 Toprim domain 5 148 8.4E-33 T 22-04-2016 IPR006171 Toprim domain YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PANTHER PTHR11390:SF27 73 782 0.0 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Pfam PF01131 DNA topoisomerase 163 571 5.5E-126 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 SMART SM00437 278 533 1.2E-119 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 SMART SM00493 3 138 1.3E-34 T 22-04-2016 IPR006171 Toprim domain YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PANTHER PTHR11390 73 782 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 3.0E-255 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:3.40.50.140 1 169 5.2E-58 T 22-04-2016 IPR006171 Toprim domain YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:2.20.25.10 814 871 1.8E-31 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:1.10.460.10 170 217 5.8E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Gene3D G3DSA:1.10.460.10 480 602 5.8E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 750 1.0E-11 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 8.7E-6 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 SUPERFAMILY SSF57783 815 870 1.63E-22 T 22-04-2016 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 SUPERFAMILY SSF56712 3 615 5.62E-202 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YPTB_RS11700 8b61b3c264c5c492758b46d4b2824d01 871 SUPERFAMILY SSF57783 706 749 2.21E-7 T 22-04-2016 YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 SUPERFAMILY SSF54534 1 139 2.55E-34 T 22-04-2016 YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 71 2.4E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 Gene3D G3DSA:3.10.50.40 2 76 7.9E-17 T 22-04-2016 YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 Gene3D G3DSA:3.10.50.40 126 141 7.9E-17 T 22-04-2016 YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516:SF329 7 82 7.4E-24 T 22-04-2016 YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516:SF329 129 141 7.4E-24 T 22-04-2016 YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516 7 82 7.4E-24 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPTB_RS03485 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516 129 141 7.4E-24 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.505 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.0E-40 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.0E-40 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.0E-40 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.0E-40 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.0E-40 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PANTHER PTHR11405 3 170 4.1E-258 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PANTHER PTHR11405 186 380 4.1E-258 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 SMART SM01097 3 133 1.2E-90 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 Gene3D G3DSA:3.50.30.20 4 147 1.7E-62 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 Pfam PF00117 Glutamine amidotransferase class-I 197 372 5.9E-48 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 SUPERFAMILY SSF52021 3 143 7.32E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 Gene3D G3DSA:3.40.50.880 154 378 5.7E-83 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.3E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.3E-150 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.4E-11 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.4E-11 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.4E-11 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 22-04-2016 YPTB_RS03505 5fafb031a88fa1431c7d72649807b3a2 391 SUPERFAMILY SSF52317 153 378 8.87E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS04755 258397d8c0dc51c2dbc2cdbd4837f137 249 PANTHER PTHR21392 15 238 7.7E-134 T 22-04-2016 YPTB_RS04755 258397d8c0dc51c2dbc2cdbd4837f137 249 Pfam PF03942 DTW domain 45 229 6.6E-44 T 22-04-2016 IPR005636 DTW YPTB_RS04755 258397d8c0dc51c2dbc2cdbd4837f137 249 SMART SM01144 42 234 2.3E-75 T 22-04-2016 IPR005636 DTW YPTB_RS04755 258397d8c0dc51c2dbc2cdbd4837f137 249 PANTHER PTHR21392:SF1 15 238 7.7E-134 T 22-04-2016 YPTB_RS09415 2120f85aea3618aae351a8445c95ed16 132 PANTHER PTHR34773 1 125 3.4E-50 T 22-04-2016 YPTB_RS09415 2120f85aea3618aae351a8445c95ed16 132 Gene3D G3DSA:1.20.120.340 8 130 7.9E-46 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS09415 2120f85aea3618aae351a8445c95ed16 132 PIRSF PIRSF039090 1 132 1.7E-42 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS09415 2120f85aea3618aae351a8445c95ed16 132 SUPERFAMILY SSF101116 8 130 2.62E-41 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS09415 2120f85aea3618aae351a8445c95ed16 132 Pfam PF02561 Flagellar protein FliS 8 125 7.4E-40 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS09415 2120f85aea3618aae351a8445c95ed16 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 2.0E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS08695 eea113e70b6baebe8ab56acde6e5ecf6 446 PANTHER PTHR23508:SF8 1 446 2.0E-263 T 22-04-2016 YPTB_RS08695 eea113e70b6baebe8ab56acde6e5ecf6 446 Pfam PF07690 Major Facilitator Superfamily 30 364 5.1E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS08695 eea113e70b6baebe8ab56acde6e5ecf6 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPTB_RS08695 eea113e70b6baebe8ab56acde6e5ecf6 446 SUPERFAMILY SSF103473 13 438 3.27E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS08695 eea113e70b6baebe8ab56acde6e5ecf6 446 PANTHER PTHR23508 1 446 2.0E-263 T 22-04-2016 YPTB_RS08695 eea113e70b6baebe8ab56acde6e5ecf6 446 Gene3D G3DSA:1.20.1250.20 259 442 1.6E-17 T 22-04-2016 YPTB_RS08695 eea113e70b6baebe8ab56acde6e5ecf6 446 Gene3D G3DSA:1.20.1250.20 25 211 1.2E-23 T 22-04-2016 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 PANTHER PTHR10890 1 460 4.8E-263 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 SMART SM00840 341 402 1.9E-27 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.241 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 Gene3D G3DSA:1.20.120.640 306 392 1.1E-28 T 22-04-2016 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 8.2E-142 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.8E-192 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 Pfam PF09190 DALR domain 341 402 1.9E-24 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 Gene3D G3DSA:3.40.50.620 19 305 1.3E-111 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS05705 f0132ba08861116156c5582165f69820 461 SUPERFAMILY SSF47323 316 460 1.96E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS05705 f0132ba08861116156c5582165f69820 461 SUPERFAMILY SSF52374 1 313 1.23E-101 T 22-04-2016 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 Gene3D G3DSA:3.90.1170.10 22 133 1.5E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 SUPERFAMILY SSF54686 3 133 4.84E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 PANTHER PTHR12220 1 136 2.2E-76 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.4E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.3E-60 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19980 d252f117c8daca16b432349f8e30f5bd 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.821 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794:SF58 186 423 6.5E-190 T 22-04-2016 YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794:SF58 1 150 6.5E-190 T 22-04-2016 YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 SMART SM00922 198 294 6.0E-22 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 Pfam PF13378 Enolase C-terminal domain-like 201 414 2.6E-56 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794 186 423 6.5E-190 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794 1 150 6.5E-190 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 SUPERFAMILY SSF51604 183 423 2.49E-69 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 244 275 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 Gene3D G3DSA:3.20.20.120 181 423 6.1E-93 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 135 5.6E-5 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 SUPERFAMILY SSF54826 4 138 4.77E-37 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS08675 36dd236122be9428c17ec2583c0f7294 425 Gene3D G3DSA:3.30.390.10 2 177 1.4E-88 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 SMART SM00420 6 58 7.8E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 Pfam PF00455 DeoR C terminal sensor domain 75 234 9.6E-49 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 PANTHER PTHR30363 1 269 8.8E-182 T 22-04-2016 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 SMART SM01134 73 236 3.1E-61 T 22-04-2016 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 SUPERFAMILY SSF46785 4 63 3.87E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 Gene3D G3DSA:3.40.50.1360 76 221 6.4E-13 T 22-04-2016 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.8E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.8E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 PANTHER PTHR30363:SF5 1 269 8.8E-182 T 22-04-2016 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 SUPERFAMILY SSF100950 74 234 6.51E-26 T 22-04-2016 YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 Gene3D G3DSA:1.10.10.10 3 59 2.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07040 b1d684292209706c80be23d6caa9c748 269 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.1E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS08700 049f088c91ba851bb208e36c2d7ff23d 293 PANTHER PTHR10587 1 289 3.8E-121 T 22-04-2016 YPTB_RS08700 049f088c91ba851bb208e36c2d7ff23d 293 Pfam PF01522 Polysaccharide deacetylase 41 145 4.8E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS08700 049f088c91ba851bb208e36c2d7ff23d 293 PANTHER PTHR10587:SF74 1 289 3.8E-121 T 22-04-2016 YPTB_RS08700 049f088c91ba851bb208e36c2d7ff23d 293 Gene3D G3DSA:3.20.20.370 3 291 3.5E-84 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS08700 049f088c91ba851bb208e36c2d7ff23d 293 SUPERFAMILY SSF88713 8 291 1.43E-61 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS11595 7116b5b25f9908944ced481ff2151426 579 SUPERFAMILY SSF52091 445 537 3.73E-11 T 22-04-2016 IPR002645 STAS domain YPTB_RS11595 7116b5b25f9908944ced481ff2151426 579 Gene3D G3DSA:3.30.750.24 445 537 1.2E-10 T 22-04-2016 IPR002645 STAS domain YPTB_RS11595 7116b5b25f9908944ced481ff2151426 579 PANTHER PTHR11814 3 571 4.1E-143 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 YPTB_RS11595 7116b5b25f9908944ced481ff2151426 579 Pfam PF00916 Sulfate permease family 26 387 1.1E-86 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YPTB_RS11595 7116b5b25f9908944ced481ff2151426 579 Pfam PF01740 STAS domain 445 531 5.0E-13 T 22-04-2016 IPR002645 STAS domain YPTB_RS08310 46f5670b00645a03d7285f122fc9e629 256 SUPERFAMILY SSF69572 4 248 3.92E-87 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS08310 46f5670b00645a03d7285f122fc9e629 256 PANTHER PTHR10953 4 248 7.1E-89 T 22-04-2016 YPTB_RS08310 46f5670b00645a03d7285f122fc9e629 256 Gene3D G3DSA:3.40.50.720 5 249 1.4E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08310 46f5670b00645a03d7285f122fc9e629 256 Pfam PF00899 ThiF family 13 245 4.3E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS08310 46f5670b00645a03d7285f122fc9e629 256 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 5.1E-123 T 22-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 PANTHER PTHR13794 6 311 2.2E-111 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 Pfam PF13378 Enolase C-terminal domain-like 127 283 2.2E-14 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 3.2E-116 T 22-04-2016 YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 Gene3D G3DSA:3.20.20.120 122 298 1.6E-49 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 315 25.443 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 SUPERFAMILY SSF54826 1 98 1.77E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 SMART SM00922 115 210 5.6E-9 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 PANTHER PTHR13794:SF8 6 311 2.2E-111 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 Gene3D G3DSA:3.30.390.10 1 121 3.2E-29 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS13875 0801d0756947ee7f5c67b90849be00b1 323 SUPERFAMILY SSF51604 108 307 1.22E-51 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS20840 540025bc7d27be19070c427e6b506077 309 PANTHER PTHR22911:SF73 1 307 1.3E-174 T 22-04-2016 YPTB_RS20840 540025bc7d27be19070c427e6b506077 309 Pfam PF00892 EamA-like transporter family 162 293 2.8E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS20840 540025bc7d27be19070c427e6b506077 309 PANTHER PTHR22911 1 307 1.3E-174 T 22-04-2016 YPTB_RS15850 fae58e36ded1eb1b3cdb33b16390f385 105 PANTHER PTHR34581 4 105 2.4E-52 T 22-04-2016 YPTB_RS15850 fae58e36ded1eb1b3cdb33b16390f385 105 Gene3D G3DSA:3.40.50.270 1 104 3.4E-35 T 22-04-2016 YPTB_RS15850 fae58e36ded1eb1b3cdb33b16390f385 105 PANTHER PTHR34581:SF2 4 105 2.4E-52 T 22-04-2016 YPTB_RS15850 fae58e36ded1eb1b3cdb33b16390f385 105 SUPERFAMILY SSF52794 4 103 7.85E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS15850 fae58e36ded1eb1b3cdb33b16390f385 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.4E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS05450 2fdd02605cb6e751036b20f33eff01fb 117 SUPERFAMILY SSF75169 1 117 7.07E-33 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS05450 2fdd02605cb6e751036b20f33eff01fb 117 Gene3D G3DSA:3.40.1260.10 1 117 4.3E-41 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS05450 2fdd02605cb6e751036b20f33eff01fb 117 Pfam PF02635 DsrE/DsrF-like family 3 117 6.7E-21 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YPTB_RS05450 2fdd02605cb6e751036b20f33eff01fb 117 PANTHER PTHR34874 2 117 5.9E-80 T 22-04-2016 YPTB_RS05450 2fdd02605cb6e751036b20f33eff01fb 117 PANTHER PTHR34874:SF2 2 117 5.9E-80 T 22-04-2016 YPTB_RS10400 c785f2e366c8d9951407b7b54b019ba9 157 Pfam PF13302 Acetyltransferase (GNAT) domain 14 130 1.1E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS10400 c785f2e366c8d9951407b7b54b019ba9 157 SUPERFAMILY SSF55729 7 153 2.82E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10400 c785f2e366c8d9951407b7b54b019ba9 157 PANTHER PTHR13256 13 153 9.0E-18 T 22-04-2016 YPTB_RS10400 c785f2e366c8d9951407b7b54b019ba9 157 Gene3D G3DSA:3.40.630.30 37 153 3.4E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10400 c785f2e366c8d9951407b7b54b019ba9 157 PANTHER PTHR13256:SF28 13 153 9.0E-18 T 22-04-2016 YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 SUPERFAMILY SSF55920 174 402 2.22E-47 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 Pfam PF00557 Metallopeptidase family M24 184 388 2.7E-34 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 Gene3D G3DSA:3.90.230.10 176 401 4.1E-44 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 177 9.3E-28 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 PANTHER PTHR10804 93 115 4.7E-48 T 22-04-2016 YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 PANTHER PTHR10804 158 400 4.7E-48 T 22-04-2016 YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 Gene3D G3DSA:3.40.350.10 14 175 2.2E-13 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 SUPERFAMILY SSF53092 8 90 2.09E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPTB_RS10690 b6b4d28678767d51e25bbc2c6a602bbc 405 SUPERFAMILY SSF53092 122 176 2.09E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPTB_RS06290 c5b6e7f909936f593a6b04b0516ab47f 94 Pfam PF03658 RnfH family Ubiquitin 4 86 2.4E-34 T 22-04-2016 IPR005346 RnfH protein YPTB_RS06290 c5b6e7f909936f593a6b04b0516ab47f 94 Gene3D G3DSA:3.10.20.280 3 88 8.0E-37 T 22-04-2016 IPR005346 RnfH protein YPTB_RS06290 c5b6e7f909936f593a6b04b0516ab47f 94 PANTHER PTHR37483:SF1 1 93 4.3E-43 T 22-04-2016 YPTB_RS06290 c5b6e7f909936f593a6b04b0516ab47f 94 PANTHER PTHR37483 1 93 4.3E-43 T 22-04-2016 YPTB_RS06290 c5b6e7f909936f593a6b04b0516ab47f 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.914 T 22-04-2016 IPR005346 RnfH protein YPTB_RS06290 c5b6e7f909936f593a6b04b0516ab47f 94 SUPERFAMILY SSF54285 4 78 6.34E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTB_RS02870 45c7bbac1b5e47444a74baa4fb88e198 294 PANTHER PTHR30193 7 294 8.1E-115 T 22-04-2016 YPTB_RS02870 45c7bbac1b5e47444a74baa4fb88e198 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 283 4.9E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02870 45c7bbac1b5e47444a74baa4fb88e198 294 Gene3D G3DSA:1.10.3720.10 62 282 4.6E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02870 45c7bbac1b5e47444a74baa4fb88e198 294 SUPERFAMILY SSF161098 55 281 5.1E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02870 45c7bbac1b5e47444a74baa4fb88e198 294 PANTHER PTHR30193:SF6 7 294 8.1E-115 T 22-04-2016 YPTB_RS12750 c6df74213639dc196672a8cf86c775c9 116 SUPERFAMILY SSF55200 23 115 6.93E-33 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YPTB_RS12750 c6df74213639dc196672a8cf86c775c9 116 PANTHER PTHR10938 1 116 6.2E-39 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YPTB_RS12750 c6df74213639dc196672a8cf86c775c9 116 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 115 2.4E-46 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YPTB_RS12750 c6df74213639dc196672a8cf86c775c9 116 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 24 113 3.1E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YPTB_RS12750 c6df74213639dc196672a8cf86c775c9 116 Gene3D G3DSA:3.30.110.10 20 115 6.6E-39 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 119.798 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 PANTHER PTHR32125 1 228 1.7E-124 T 22-04-2016 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 1.9E-110 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 PIRSF PIRSF000386 1 245 7.4E-102 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 SUPERFAMILY SSF75217 1 244 3.53E-102 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 PANTHER PTHR32125:SF1 1 228 1.7E-124 T 22-04-2016 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 Gene3D G3DSA:1.10.1270.20 161 244 4.9E-36 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 4.6E-70 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPTB_RS04640 9db0890cf84c80cd7849017cf3213fb0 246 Gene3D G3DSA:3.40.1280.10 1 160 3.5E-67 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 1 372 2.2E-115 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PANTHER PTHR30332 3 373 1.8E-113 T 22-04-2016 YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PANTHER PTHR30332:SF8 3 373 1.8E-113 T 22-04-2016 YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 193 216 6.5E-11 T 22-04-2016 YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 300 328 6.5E-11 T 22-04-2016 YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 234 257 6.5E-11 T 22-04-2016 YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 353 374 6.5E-11 T 22-04-2016 YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 Pfam PF03958 Bacterial type II/III secretion system short domain 82 143 3.4E-11 T 22-04-2016 IPR005644 NolW-like YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 144 154 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 337 355 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 209 233 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 374 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS20280 b15ee7723875f1349a2dbe0097b18679 374 Pfam PF00263 Bacterial type II and III secretion system protein 213 372 1.6E-46 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 Gene3D G3DSA:3.30.70.1350 207 288 1.0E-30 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 Gene3D G3DSA:1.20.1510.10 12 206 3.5E-44 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 PANTHER PTHR11562:SF55 1 296 5.6E-128 T 22-04-2016 YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 60.694 T 22-04-2016 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 SUPERFAMILY SSF160240 209 288 2.09E-24 T 22-04-2016 YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 288 9.2E-73 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 5.4E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 PANTHER PTHR11562 1 296 5.6E-128 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 SUPERFAMILY SSF161111 9 207 7.72E-51 T 22-04-2016 YPTB_RS00465 aafc867753a2fa9226e5179bd8918b26 300 Pfam PF01545 Cation efflux family 16 206 5.4E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS11340 8430b46a4dc92de76785c9b12d5c2cf8 176 PANTHER PTHR36570 1 176 3.6E-108 T 22-04-2016 YPTB_RS11340 8430b46a4dc92de76785c9b12d5c2cf8 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.0E-46 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 YPTB_RS11340 8430b46a4dc92de76785c9b12d5c2cf8 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.731 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB YPTB_RS11340 8430b46a4dc92de76785c9b12d5c2cf8 176 Gene3D G3DSA:1.20.1550.10 1 174 4.1E-71 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain YPTB_RS11340 8430b46a4dc92de76785c9b12d5c2cf8 176 PANTHER PTHR36570:SF2 1 176 3.6E-108 T 22-04-2016 YPTB_RS11340 8430b46a4dc92de76785c9b12d5c2cf8 176 SUPERFAMILY SSF158442 15 161 7.06E-47 T 22-04-2016 YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 Pfam PF05488 PAAR motif 195 259 5.4E-16 T 22-04-2016 IPR008727 PAAR motif YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 Pfam PF05593 RHS Repeat 852 886 1.4E-5 T 22-04-2016 IPR031325 RHS repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 Pfam PF05593 RHS Repeat 657 694 3.8E-6 T 22-04-2016 IPR031325 RHS repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 Pfam PF05593 RHS Repeat 1177 1205 2.6E-5 T 22-04-2016 IPR031325 RHS repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 Pfam PF05593 RHS Repeat 922 951 7.0E-5 T 22-04-2016 IPR031325 RHS repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1310 1389 3.2E-25 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 636 676 1.1E-6 T 22-04-2016 IPR006530 YD repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 657 696 0.0024 T 22-04-2016 IPR006530 YD repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 830 870 9.4E-6 T 22-04-2016 IPR006530 YD repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 922 961 2.0E-8 T 22-04-2016 IPR006530 YD repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 852 892 1.4E-5 T 22-04-2016 IPR006530 YD repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1177 1207 1.0E-4 T 22-04-2016 IPR006530 YD repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 788 826 3.0E-4 T 22-04-2016 IPR006530 YD repeat YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 Pfam PF03527 RHS protein 1282 1314 1.2E-10 T 22-04-2016 IPR001826 RHS protein YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 PANTHER PTHR32305:SF6 1101 1443 0.0 T 22-04-2016 YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 PANTHER PTHR32305:SF6 140 1009 0.0 T 22-04-2016 YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 PANTHER PTHR32305 1101 1443 0.0 T 22-04-2016 YPTB_RS19545 43a5728e1d4e64bdc52c8b6c4180d17f 1520 PANTHER PTHR32305 140 1009 0.0 T 22-04-2016 YPTB_RS03265 5cf3a694337a5866486b66a8da2d98d2 204 Pfam PF04972 BON domain 137 204 2.1E-18 T 22-04-2016 IPR007055 BON domain YPTB_RS03265 5cf3a694337a5866486b66a8da2d98d2 204 Pfam PF04972 BON domain 57 124 1.7E-22 T 22-04-2016 IPR007055 BON domain YPTB_RS03265 5cf3a694337a5866486b66a8da2d98d2 204 PANTHER PTHR34606 41 204 1.5E-69 T 22-04-2016 YPTB_RS03265 5cf3a694337a5866486b66a8da2d98d2 204 SMART SM00749 62 125 9.5E-11 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPTB_RS03265 5cf3a694337a5866486b66a8da2d98d2 204 SMART SM00749 141 204 2.6E-12 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPTB_RS03265 5cf3a694337a5866486b66a8da2d98d2 204 PANTHER PTHR34606:SF3 41 204 1.5E-69 T 22-04-2016 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 SUPERFAMILY SSF53167 12 496 3.98E-152 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 165 5.6E-50 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 PANTHER PTHR21234 192 237 9.7E-138 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 PANTHER PTHR21234 261 496 9.7E-138 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 14 496 4.6E-222 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 Hamap MF_01932 AMP nucleosidase [amn]. 5 496 57.697 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 Pfam PF01048 Phosphorylase superfamily 280 443 7.0E-18 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 Gene3D G3DSA:3.30.1730.10 13 166 1.0E-58 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 Gene3D G3DSA:3.40.50.1580 186 478 6.8E-115 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 PANTHER PTHR21234:SF11 192 237 9.7E-138 T 22-04-2016 YPTB_RS12065 3c9c6428456d02f1b890f2abf1c4e002 496 PANTHER PTHR21234:SF11 261 496 9.7E-138 T 22-04-2016 YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 SMART SM00316 34 116 8.7E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 Gene3D G3DSA:2.40.50.140 28 121 3.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 Pfam PF00575 S1 RNA binding domain 33 115 1.5E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 PANTHER PTHR30001:SF1 1 846 0.0 T 22-04-2016 YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 PANTHER PTHR30001 1 846 0.0 T 22-04-2016 YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 SUPERFAMILY SSF50249 37 121 8.98E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 Hamap MF_00970 Ribonuclease E [rne]. 1 1213 41.055 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 Pfam PF10150 Ribonuclease E/G family 118 388 4.9E-92 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1189 1224 6.8E-15 T 22-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal YPTB_RS13470 a7bada18d7fb87d43d057dcf39ad4eff 1227 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 422 1.1E-169 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 Gene3D G3DSA:3.40.190.10 108 191 4.8E-16 T 22-04-2016 YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 PANTHER PTHR30537:SF5 12 326 3.8E-136 T 22-04-2016 YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 Gene3D G3DSA:3.40.190.10 192 272 7.4E-15 T 22-04-2016 YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 78 1.2E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 PANTHER PTHR30537 12 326 3.8E-136 T 22-04-2016 YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 SUPERFAMILY SSF46785 21 101 3.33E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 Pfam PF03466 LysR substrate binding domain 105 309 5.4E-33 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 SUPERFAMILY SSF53850 105 310 3.08E-37 T 22-04-2016 YPTB_RS01965 03046036fbf4ba59cc84cc9df49d2433 327 Gene3D G3DSA:1.10.10.10 21 95 7.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 945 19.763 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81593 815 943 7.53E-34 T 22-04-2016 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81301 10 286 1.21E-93 T 22-04-2016 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81301 526 813 1.01E-87 T 22-04-2016 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81593 287 436 5.49E-45 T 22-04-2016 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 5.7E-48 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 Pfam PF08335 GlnD PII-uridylyltransferase 825 919 2.1E-10 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 PANTHER PTHR30621 1 942 0.0 T 22-04-2016 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 2.9E-98 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 276 1.5E-95 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 Gene3D G3DSA:3.30.460.10 639 813 4.1E-62 T 22-04-2016 YPTB_RS18425 81045270d1ea719ae31422df80ba0671 951 Gene3D G3DSA:3.30.460.10 113 285 1.3E-62 T 22-04-2016 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 Gene3D G3DSA:3.40.1190.20 13 313 1.3E-64 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.6E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 Gene3D G3DSA:3.40.50.620 340 461 1.1E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 SUPERFAMILY SSF52374 340 470 3.56E-22 T 22-04-2016 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 Pfam PF00294 pfkB family carbohydrate kinase 13 305 4.3E-51 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.8E-126 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 PANTHER PTHR10584 1 338 5.8E-157 T 22-04-2016 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.224 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 2.2E-63 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 PANTHER PTHR10584:SF159 1 338 5.8E-157 T 22-04-2016 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 Pfam PF01467 Cytidylyltransferase-like 345 469 1.0E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS18420 de2270720e42455c443eddf053f0173c 476 SUPERFAMILY SSF53613 12 310 2.18E-55 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 PIRSF PIRSF001549 2 421 4.2E-125 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 PANTHER PTHR11476:SF9 2 424 8.7E-239 T 22-04-2016 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 Pfam PF03129 Anticodon binding domain 331 418 1.3E-9 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.069 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.2E-45 T 22-04-2016 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 PANTHER PTHR11476 2 424 8.7E-239 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 SUPERFAMILY SSF52954 327 419 2.29E-23 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 4.6E-155 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 Gene3D G3DSA:3.40.50.800 327 420 6.1E-30 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 SUPERFAMILY SSF55681 5 320 1.26E-105 T 22-04-2016 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 Gene3D G3DSA:3.30.930.10 4 185 1.1E-99 T 22-04-2016 YPTB_RS15370 767267d63445c786cf3887af6af4e90a 424 Gene3D G3DSA:3.30.930.10 221 320 1.1E-99 T 22-04-2016 YPTB_RS02055 0a0ed9bc185497597a2986a620897224 353 PIRSF PIRSF029120 1 353 4.8E-175 T 22-04-2016 IPR011226 ATP-grasp family YPTB_RS02055 0a0ed9bc185497597a2986a620897224 353 Gene3D G3DSA:3.30.470.20 217 309 1.2E-11 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS02055 0a0ed9bc185497597a2986a620897224 353 SUPERFAMILY SSF56059 109 314 7.44E-20 T 22-04-2016 YPTB_RS02055 0a0ed9bc185497597a2986a620897224 353 Pfam PF15632 ATP-grasp in the biosynthetic pathway with Ter operon 4 340 2.4E-110 T 22-04-2016 IPR011226 ATP-grasp family YPTB_RS10795 09dbcf3588cc3cc2f643a8e2ddc043de 456 SUPERFAMILY SSF51338 367 434 1.17E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS10795 09dbcf3588cc3cc2f643a8e2ddc043de 456 PANTHER PTHR11271:SF4 15 454 4.6E-216 T 22-04-2016 IPR010252 Formiminoglutamate deiminase YPTB_RS10795 09dbcf3588cc3cc2f643a8e2ddc043de 456 Gene3D G3DSA:3.20.20.140 54 396 3.2E-72 T 22-04-2016 YPTB_RS10795 09dbcf3588cc3cc2f643a8e2ddc043de 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 453 6.6E-228 T 22-04-2016 IPR010252 Formiminoglutamate deiminase YPTB_RS10795 09dbcf3588cc3cc2f643a8e2ddc043de 456 PANTHER PTHR11271 15 454 4.6E-216 T 22-04-2016 YPTB_RS10795 09dbcf3588cc3cc2f643a8e2ddc043de 456 Pfam PF01979 Amidohydrolase family 48 429 6.0E-30 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPTB_RS10795 09dbcf3588cc3cc2f643a8e2ddc043de 456 SUPERFAMILY SSF51556 50 354 1.66E-68 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 1.4E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 PANTHER PTHR33154 8 99 7.5E-25 T 22-04-2016 YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 SUPERFAMILY SSF46785 2 91 1.82E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 SMART SM00418 8 86 3.3E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 7.4E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 7.4E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 7.4E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 7.4E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPTB_RS04365 6ed6f39eae94372fcb508a94898f68df 113 Gene3D G3DSA:1.10.10.10 7 89 1.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 PANTHER PTHR24220 300 354 3.5E-196 T 22-04-2016 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 PANTHER PTHR24220 6 283 3.5E-196 T 22-04-2016 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 SUPERFAMILY SSF50331 238 355 4.02E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 Pfam PF00005 ABC transporter 21 163 8.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 Gene3D G3DSA:3.40.50.300 3 237 3.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 Pfam PF08402 TOBE domain 280 356 1.0E-15 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 353 3.2E-110 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 SMART SM00382 30 212 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 PANTHER PTHR24220:SF402 300 354 3.5E-196 T 22-04-2016 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 PANTHER PTHR24220:SF402 6 283 3.5E-196 T 22-04-2016 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS15220 fff6a5bf5f08ef08478974708d60e02a 361 SUPERFAMILY SSF52540 5 242 2.59E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 42.116 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PANTHER PTHR23402:SF1 1 214 1.4E-74 T 22-04-2016 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 Gene3D G3DSA:3.40.630.20 2 210 3.1E-70 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 4.9E-83 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 214 1.1E-89 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 SUPERFAMILY SSF53182 1 214 1.57E-76 T 22-04-2016 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PIRSF PIRSF015592 1 213 7.6E-90 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPTB_RS15700 11bfb9b211ffe1da490d9e92bcd15652 215 PANTHER PTHR23402 1 214 1.4E-74 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 PANTHER PTHR23133 6 185 4.0E-73 T 22-04-2016 YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 153 2.9E-37 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 154 6.4E-40 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 Gene3D G3DSA:3.40.50.1000 3 183 1.3E-61 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 SUPERFAMILY SSF56784 3 184 4.61E-53 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 Pfam PF13242 HAD-hyrolase-like 109 179 3.6E-12 T 22-04-2016 YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 PIRSF PIRSF004682 1 188 4.0E-67 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 PANTHER PTHR23133:SF3 6 185 4.0E-73 T 22-04-2016 YPTB_RS16100 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 2.2E-93 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YPTB_RS20235 b7aef51668276be5b57b6362177e07fc 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPTB_RS20235 b7aef51668276be5b57b6362177e07fc 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 6.9E-80 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPTB_RS20235 b7aef51668276be5b57b6362177e07fc 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPTB_RS20235 b7aef51668276be5b57b6362177e07fc 268 Pfam PF01226 Formate/nitrite transporter 18 247 1.4E-56 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPTB_RS20235 b7aef51668276be5b57b6362177e07fc 268 PANTHER PTHR30520 1 267 9.7E-133 T 22-04-2016 YPTB_RS20235 b7aef51668276be5b57b6362177e07fc 268 Gene3D G3DSA:1.20.1080.10 23 249 7.3E-61 T 22-04-2016 IPR023271 Aquaporin-like YPTB_RS20235 b7aef51668276be5b57b6362177e07fc 268 PANTHER PTHR30520:SF5 1 267 9.7E-133 T 22-04-2016 YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 PANTHER PTHR30332 1 640 0.0 T 22-04-2016 YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 526 559 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 582 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 457 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 347 357 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 563 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 412 436 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 PANTHER PTHR30332:SF3 1 640 0.0 T 22-04-2016 YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 Pfam PF00263 Bacterial type II and III secretion system protein 416 581 3.3E-50 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 590 1.2E-142 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 Pfam PF03958 Bacterial type II/III secretion system short domain 131 191 8.5E-11 T 22-04-2016 IPR005644 NolW-like YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 Pfam PF03958 Bacterial type II/III secretion system short domain 196 265 5.2E-9 T 22-04-2016 IPR005644 NolW-like YPTB_RS16595 dda9b939e5d1a9483304affa7d0e1a4d 640 Pfam PF03958 Bacterial type II/III secretion system short domain 270 347 2.0E-14 T 22-04-2016 IPR005644 NolW-like YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 Gene3D G3DSA:3.40.50.1170 5 195 7.0E-76 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 8.1E-128 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 PANTHER PTHR11707 1 336 8.2E-267 T 22-04-2016 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 PIRSF PIRSF500176 2 332 4.4E-113 T 22-04-2016 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 SUPERFAMILY SSF53774 3 335 6.41E-111 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 Gene3D G3DSA:3.40.50.40 211 335 1.2E-51 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.8E-63 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 SMART SM00870 5 323 8.5E-138 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.0E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.0E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.0E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 PIRSF PIRSF001220 1 334 3.3E-99 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS11425 a85bdcaf8eae7801f82001f3dad05d7e 338 PANTHER PTHR11707:SF31 1 336 8.2E-267 T 22-04-2016 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 Gene3D G3DSA:3.40.50.2300 2 124 2.5E-35 T 22-04-2016 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 SMART SM00862 156 232 2.1E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 SUPERFAMILY SSF46894 137 234 3.12E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 Gene3D G3DSA:1.10.10.10 136 233 1.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 PANTHER PTHR26402:SF586 4 238 7.8E-156 T 22-04-2016 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 SUPERFAMILY SSF52172 2 127 8.4E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 7.0E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 PANTHER PTHR26402 4 238 7.8E-156 T 22-04-2016 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 SMART SM00448 4 114 4.5E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS03390 d396cd85d815ba09f49e0b91eed6ec93 238 Pfam PF00072 Response regulator receiver domain 6 113 6.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851:SF135 5 396 0.0 T 22-04-2016 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851:SF135 413 931 0.0 T 22-04-2016 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 77 100 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851 5 396 0.0 T 22-04-2016 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851 413 931 0.0 T 22-04-2016 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 267 504 4.23E-65 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 509 726 3.3E-60 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 727 956 2.9E-53 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 33 267 1.6E-63 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF00675 Insulinase (Peptidase family M16) 57 193 1.6E-33 T 22-04-2016 IPR011765 Peptidase M16, N-terminal YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF16187 Middle or third domain of peptidase_M16 402 676 6.5E-56 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF05193 Peptidase M16 inactive domain 218 394 5.7E-19 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF05193 Peptidase M16 inactive domain 683 859 2.1E-9 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 35 263 6.23E-52 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 506 727 5.32E-46 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 275 508 2.5E-63 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPTB_RS16390 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 740 933 2.0E-44 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:1.10.1040.10 181 434 5.6E-118 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PIRSF PIRSF000109 1 469 2.7E-242 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 1.6E-132 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:3.40.50.720 1 180 4.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:1.20.5.320 437 468 1.3E-22 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PANTHER PTHR11811:SF25 1 468 8.6E-305 T 22-04-2016 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PANTHER PTHR11811 1 468 8.6E-305 T 22-04-2016 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 5.2E-229 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 8.3E-52 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 SMART SM01350 179 468 1.7E-224 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 SUPERFAMILY SSF51735 4 172 3.26E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08535 ba5338606d1b924ac5953b8967eca97f 469 SUPERFAMILY SSF48179 177 468 9.78E-133 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS10570 1eea8a5e321243e394a55db31bb40f55 175 PANTHER PTHR13078 1 171 5.5E-87 T 22-04-2016 YPTB_RS10570 1eea8a5e321243e394a55db31bb40f55 175 Gene3D G3DSA:3.10.129.10 18 166 1.9E-44 T 22-04-2016 IPR029069 HotDog domain YPTB_RS10570 1eea8a5e321243e394a55db31bb40f55 175 SUPERFAMILY SSF54637 16 167 3.04E-46 T 22-04-2016 IPR029069 HotDog domain YPTB_RS10570 1eea8a5e321243e394a55db31bb40f55 175 Pfam PF01575 MaoC like domain 28 140 1.7E-18 T 22-04-2016 IPR002539 MaoC-like domain YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 143 159 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 SUPERFAMILY SSF53901 203 400 1.42E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 1 399 5.0E-191 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 SMART SM00825 Beta-ketoacyl synthase 5 401 7.3E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 SUPERFAMILY SSF53901 2 240 6.31E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 235 7.6E-57 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 PANTHER PTHR11712 1 400 1.4E-205 T 22-04-2016 YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 Gene3D G3DSA:3.40.47.10 251 400 4.3E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 Gene3D G3DSA:3.40.47.10 2 248 4.8E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 PIRSF PIRSF000447 1 401 1.2E-195 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YPTB_RS13420 bf0f1e9e38a2e3ee8ce40fe62ae6c76b 401 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 243 357 1.4E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 2.8E-214 T 22-04-2016 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 KEGG: 00010+1.2.1.-|KEGG: 00220+1.2.1.-|KEGG: 00260+1.2.1.-|KEGG: 00281+1.2.1.-|KEGG: 00300+1.2.1.-|KEGG: 00330+1.2.1.-|KEGG: 00380+1.2.1.-|KEGG: 00620+1.2.1.-|KEGG: 00624+1.2.1.-|KEGG: 00626+1.2.1.-|KEGG: 00640+1.2.1.-|KEGG: 00903+1.2.1.-|UniPathway: UPA00208 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 SUPERFAMILY SSF53720 3 480 7.2E-164 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 PANTHER PTHR11699:SF213 1 486 2.5E-274 T 22-04-2016 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 Gene3D G3DSA:3.40.309.10 258 449 9.8E-67 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 Gene3D G3DSA:3.40.605.10 4 257 2.4E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 Pfam PF00171 Aldehyde dehydrogenase family 16 474 2.6E-167 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS09035 e8fc0b764fca790692be6c20499a0f0f 488 PANTHER PTHR11699 1 486 2.5E-274 T 22-04-2016 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 Gene3D G3DSA:3.40.50.300 160 343 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.4E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.8E-146 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 PANTHER PTHR11702:SF3 1 378 6.7E-202 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 SUPERFAMILY SSF52540 151 339 3.54E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 Pfam PF01018 GTP1/OBG 3 156 7.9E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 Gene3D G3DSA:2.70.210.12 2 156 1.7E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 PANTHER PTHR11702 1 378 6.7E-202 T 22-04-2016 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 SUPERFAMILY SSF82051 2 157 1.31E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.084 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPTB_RS02675 8eb153cfb823fe749ec91f290ba039a2 390 PIRSF PIRSF002401 1 375 1.1E-139 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 Gene3D G3DSA:3.40.630.10 5 192 6.6E-62 T 22-04-2016 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 Gene3D G3DSA:3.40.630.10 326 385 6.6E-62 T 22-04-2016 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 385 65.426 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 PANTHER PTHR11014:SF75 5 387 1.4E-239 T 22-04-2016 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 Gene3D G3DSA:3.30.70.360 193 293 5.7E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 Pfam PF07687 Peptidase dimerisation domain 181 290 1.2E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 Pfam PF01546 Peptidase family M20/M25/M40 79 380 2.6E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 113 150 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 SUPERFAMILY SSF53187 308 385 4.0E-57 T 22-04-2016 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 SUPERFAMILY SSF53187 4 183 4.0E-57 T 22-04-2016 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 PANTHER PTHR11014 5 387 1.4E-239 T 22-04-2016 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 380 5.7E-155 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 SUPERFAMILY SSF55031 184 298 3.44E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS00660 ea35971f6e274bc17a6ba56c17ec3010 387 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 78 87 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPTB_RS08290 6c8997798a503e8f4e5afa04a9f50216 455 PANTHER PTHR37024:SF1 7 453 1.3E-157 T 22-04-2016 YPTB_RS08290 6c8997798a503e8f4e5afa04a9f50216 455 Pfam PF12486 Type VI secretion system, EvfB, or VasL 304 448 4.3E-49 T 22-04-2016 IPR021069 ImpA, C-terminal YPTB_RS08290 6c8997798a503e8f4e5afa04a9f50216 455 PANTHER PTHR37024 7 453 1.3E-157 T 22-04-2016 YPTB_RS08290 6c8997798a503e8f4e5afa04a9f50216 455 Pfam PF06812 ImpA, N-terminal, type VI secretion system 11 112 4.9E-18 T 22-04-2016 IPR010657 ImpA, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PANTHER PTHR11528 7 623 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 Gene3D G3DSA:3.30.565.10 6 217 9.6E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 28 50 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 77 94 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 192 210 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 174 191 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 7 27 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 122 144 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 95 112 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 SUPERFAMILY SSF110942 510 623 9.68E-36 T 22-04-2016 YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 Pfam PF00183 Hsp90 protein 218 623 1.7E-126 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 SUPERFAMILY SSF54211 230 485 1.97E-100 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 SUPERFAMILY SSF55874 6 216 2.88E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 SMART SM00387 29 186 4.1E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 623 32.917 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PIRSF PIRSF002583 2 624 1.2E-218 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 8.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS05495 0b4a923e235046d2194499828fe75992 624 PANTHER PTHR11528:SF44 7 623 0.0 T 22-04-2016 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.605.10 4 225 1.0E-23 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.50.1970 450 643 1.1E-63 T 22-04-2016 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:1.20.1090.10 644 864 5.7E-69 T 22-04-2016 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 PIRSF PIRSF000111 1 866 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 Pfam PF00171 Aldehyde dehydrogenase family 5 399 1.1E-27 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 SUPERFAMILY SSF56796 451 864 4.58E-119 T 22-04-2016 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 PANTHER PTHR11496:SF79 360 867 0.0 T 22-04-2016 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.309.10 309 404 1.0E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.309.10 226 273 1.0E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 PANTHER PTHR11496 360 867 0.0 T 22-04-2016 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 SUPERFAMILY SSF53720 6 453 2.62E-83 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 6.0E-114 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPTB_RS11515 b49b8ee4539c5f751d84c2f17dd11ace 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 SUPERFAMILY SSF51126 2314 2622 5.34E-7 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 SMART SM00869 3428 3695 6.3E-46 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 3274 3706 1.3E-127 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 PANTHER PTHR12338 275 3706 0.0 T 22-04-2016 YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 Gene3D G3DSA:2.160.20.20 2994 3388 3.8E-45 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 Gene3D G3DSA:2.40.128.130 3389 3706 1.7E-86 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 4.3E-9 T 22-04-2016 IPR024973 ESPR domain YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 SUPERFAMILY SSF51126 2931 3210 1.04E-46 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 SUPERFAMILY SSF51126 3238 3382 1.04E-46 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 SUPERFAMILY SSF103515 3395 3706 2.88E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17875 d36338bb5062b3374918aae301f4bc2e 3706 PANTHER PTHR12338:SF5 275 3706 0.0 T 22-04-2016 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:1.10.150.20 357 414 1.3E-22 T 22-04-2016 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF47794 429 492 1.88E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.1480.10 1 124 2.7E-46 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF47794 355 415 1.52E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Pfam PF13184 NusA-like KH domain 230 297 1.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF54814 279 342 6.54E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.300.20 199 277 6.5E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 6.7E-130 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 4.2E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 5.9E-21 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 PANTHER PTHR22648 1 448 1.7E-187 T 22-04-2016 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SMART SM00316 133 200 8.9E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF50249 133 199 2.23E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF54814 202 278 1.18E-28 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF69705 1 126 5.62E-42 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.9E-9 T 22-04-2016 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 PANTHER PTHR22648:SF0 1 448 1.7E-187 T 22-04-2016 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.039 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SMART SM00322 230 293 17.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 SMART SM00322 301 358 0.19 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Pfam PF08529 NusA N-terminal domain 4 123 8.2E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:1.10.150.20 429 493 9.2E-25 T 22-04-2016 YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:2.40.50.140 128 198 1.5E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02745 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.300.20 278 346 4.1E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 Gene3D G3DSA:1.10.10.60 209 257 1.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 Pfam PF02311 AraC-like ligand binding domain 25 134 1.4E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 SUPERFAMILY SSF51182 16 154 1.01E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 Pfam PF12833 Helix-turn-helix domain 178 255 4.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 Gene3D G3DSA:2.60.120.10 14 88 4.6E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 250 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 SUPERFAMILY SSF46689 208 256 3.36E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 PANTHER PTHR11019:SF98 19 255 2.8E-136 T 22-04-2016 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 PANTHER PTHR11019 19 255 2.8E-136 T 22-04-2016 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 Gene3D G3DSA:1.10.10.60 153 208 2.6E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS14210 fd3b9bfa1ee2834a40ba8db5439d904b 261 SMART SM00342 172 254 2.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 SUPERFAMILY SSF63380 1 93 2.21E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 Gene3D G3DSA:2.40.30.20 5 105 1.2E-32 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 Gene3D G3DSA:2.40.30.20 106 200 5.3E-27 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 Pfam PF00677 Lumazine binding domain 100 185 1.7E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 Pfam PF00677 Lumazine binding domain 3 87 2.8E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 SUPERFAMILY SSF63380 93 199 3.83E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 PANTHER PTHR21098:SF4 1 217 4.3E-139 T 22-04-2016 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 PANTHER PTHR21098 1 217 4.3E-139 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 PIRSF PIRSF000498 1 212 9.2E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS12550 8519bfca5f8a5aa59e507616d8299594 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.9E-83 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.558 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF52540 90 371 2.66E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.2E-220 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184:SF34 102 141 2.7E-199 T 22-04-2016 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184:SF34 11 51 2.7E-199 T 22-04-2016 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184:SF34 160 418 2.7E-199 T 22-04-2016 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:1.10.720.10 1 47 9.7E-22 T 22-04-2016 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00357 52 118 2.0E-18 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00959 5 47 8.6E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:2.40.50.140 49 117 8.5E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.1E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.9E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184 102 141 2.7E-199 T 22-04-2016 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184 11 51 2.7E-199 T 22-04-2016 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184 160 418 2.7E-199 T 22-04-2016 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00382 170 355 2.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF50249 48 125 5.57E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.8E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 YPTB_RS01015 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:3.40.50.300 132 418 5.8E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04605 025044cbf1175193f79493e0774d8f3b 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 514 4.5E-257 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YPTB_RS04605 025044cbf1175193f79493e0774d8f3b 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 227.92 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YPTB_RS04605 025044cbf1175193f79493e0774d8f3b 519 Pfam PF04262 Glutamate-cysteine ligase 10 380 1.8E-172 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YPTB_RS04605 025044cbf1175193f79493e0774d8f3b 519 PANTHER PTHR38761 2 518 0.0 T 22-04-2016 YPTB_RS04605 025044cbf1175193f79493e0774d8f3b 519 SUPERFAMILY SSF55931 4 514 3.47E-202 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 PANTHER PTHR24095:SF178 21 643 0.0 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Gene3D G3DSA:3.40.50.980 267 424 1.8E-25 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.2E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 SUPERFAMILY SSF56801 9 643 1.19E-188 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Gene3D G3DSA:2.30.38.10 439 515 2.1E-7 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Pfam PF00501 AMP-binding enzyme 83 522 9.9E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Gene3D G3DSA:3.30.300.30 518 639 1.2E-29 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Gene3D G3DSA:3.40.50.980 79 266 1.4E-46 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.174 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 PANTHER PTHR24095 21 643 0.0 T 22-04-2016 YPTB_RS01840 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 8.5E-20 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 SUPERFAMILY SSF54909 62 151 1.27E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 SUPERFAMILY SSF46785 1 61 1.63E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 PANTHER PTHR30154:SF17 1 151 1.0E-103 T 22-04-2016 YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 SMART SM00344 2 111 4.8E-38 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 6.0E-16 T 22-04-2016 YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 Gene3D G3DSA:1.10.10.10 3 54 2.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.0E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 8.3E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 8.3E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 Gene3D G3DSA:3.30.70.920 55 139 2.1E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS05370 24ca6b4e34def4dc71620dabe055675a 153 PANTHER PTHR30154 1 151 1.0E-103 T 22-04-2016 YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 SUPERFAMILY SSF52540 15 239 2.39E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 PANTHER PTHR24220:SF308 18 394 5.6E-139 T 22-04-2016 YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 SMART SM00382 294 488 2.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 SMART SM00382 41 228 4.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 SUPERFAMILY SSF52540 262 492 2.25E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 Pfam PF00005 ABC transporter 32 181 3.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 Pfam PF00005 ABC transporter 285 439 4.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 PANTHER PTHR24220 18 394 5.6E-139 T 22-04-2016 YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 Gene3D G3DSA:3.40.50.300 268 492 1.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12040 c9dc8e45d8758120c7d7e3e6ba783345 512 Gene3D G3DSA:3.40.50.300 14 239 6.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPTB_RS06265 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPTB_RS01820 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPTB_RS08720 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPTB_RS20935 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPTB_RS09965 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 Gene3D G3DSA:2.30.30.280 214 281 2.3E-33 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 PANTHER PTHR11933 1 366 5.0E-220 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 Pfam PF03054 tRNA methyl transferase 7 361 1.5E-142 T 22-04-2016 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 Gene3D G3DSA:3.40.50.620 4 212 1.6E-97 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 Gene3D G3DSA:2.40.30.10 283 366 3.1E-33 T 22-04-2016 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 6.1E-156 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.894 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 PANTHER PTHR11933:SF10 1 366 5.0E-220 T 22-04-2016 YPTB_RS13220 d3af22d892a2b4495d4cd9367376a029 371 SUPERFAMILY SSF52402 5 245 2.43E-56 T 22-04-2016 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 SUPERFAMILY SSF51735 2 150 2.9E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.237 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.2E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 3.1E-47 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 SUPERFAMILY SSF55347 126 274 1.73E-63 T 22-04-2016 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 SUPERFAMILY SSF69055 301 395 7.19E-29 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 PANTHER PTHR30525 1 398 5.3E-235 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 Gene3D G3DSA:3.40.50.720 1 150 3.7E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 2.8E-39 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 Gene3D G3DSA:1.10.1740.10 313 395 4.4E-28 T 22-04-2016 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 395 2.3E-177 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS16235 84b580f7c1007a6f90acb59a660f3ed9 398 PIRSF PIRSF006205 1 398 3.3E-154 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 Gene3D G3DSA:4.10.910.10 72 118 7.5E-26 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 PIRSF PIRSF002134 1 118 6.0E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 PANTHER PTHR10871 2 118 1.3E-67 T 22-04-2016 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.6E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.1E-33 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 SUPERFAMILY SSF46946 2 114 2.06E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 Gene3D G3DSA:1.10.8.50 2 71 4.0E-28 T 22-04-2016 YPTB_RS19905 27f9ad9f09ec293cd83e76776f5acb21 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.787 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 SUPERFAMILY SSF51126 436 739 6.59E-46 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 SUPERFAMILY SSF51126 162 392 6.59E-46 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 PANTHER PTHR35037:SF1 1 1067 0.0 T 22-04-2016 YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 SUPERFAMILY SSF103515 761 1070 3.4E-43 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 Gene3D G3DSA:2.40.128.130 755 1070 3.0E-68 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 Pfam PF03212 Pertactin 632 738 5.0E-12 T 22-04-2016 IPR004899 Pertactin, central region YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 Pfam PF03797 Autotransporter beta-domain 803 1053 4.6E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 635 1070 6.6E-113 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 Gene3D G3DSA:2.160.20.20 36 276 1.9E-6 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 Gene3D G3DSA:2.160.20.20 277 750 7.7E-67 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 SMART SM00869 799 1058 2.6E-30 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS20675 bb68c9dc420f3a072c3f565189f0650e 1070 PANTHER PTHR35037 1 1067 0.0 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 169 209 2.2E-6 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.0E-30 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 PANTHER PTHR32432 1 413 6.8E-185 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.689 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 198 384 2.13E-47 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 PIRSF PIRSF003101 1 418 9.6E-154 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 PANTHER PTHR32432:SF4 1 413 6.8E-185 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 SMART SM00842 10 196 1.3E-96 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 7 138 2.5E-33 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 8 221 7.12E-62 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 298 359 1.2E-29 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 210 234 1.2E-29 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF14450 Cell division protein FtsA 207 381 1.3E-24 T 22-04-2016 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-161 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YPTB_RS03875 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.90.640.10 235 297 5.1E-18 T 22-04-2016 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 Gene3D G3DSA:3.40.50.300 549 788 5.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PANTHER PTHR11638 1 144 0.0 T 22-04-2016 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PANTHER PTHR11638 178 861 0.0 T 22-04-2016 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 674 692 9.7E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 707 721 9.7E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 645 663 9.7E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 618 9.7E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 SMART SM00382 221 366 5.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 SMART SM00382 596 753 2.9E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 16 850 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 595 762 5.9E-31 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 Gene3D G3DSA:3.40.50.300 184 364 2.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 SUPERFAMILY SSF52540 545 838 1.49E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PANTHER PTHR11638:SF122 1 144 0.0 T 22-04-2016 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 PANTHER PTHR11638:SF122 178 861 0.0 T 22-04-2016 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 Gene3D G3DSA:1.10.1780.10 8 129 8.3E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 SUPERFAMILY SSF52540 184 499 4.44E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 SMART SM01086 767 859 0.0094 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 226 359 1.0E-10 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 Gene3D G3DSA:1.10.8.60 368 450 1.0E-25 T 22-04-2016 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 SUPERFAMILY SSF81923 13 129 9.81E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS03625 bcec8ff232ad3774fd226a2e72c36b70 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 73 2.7E-7 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 PANTHER PTHR10815 154 348 5.9E-131 T 22-04-2016 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Pfam PF12833 Helix-turn-helix domain 102 179 1.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 SUPERFAMILY SSF46689 81 129 2.96E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 PANTHER PTHR10815:SF9 154 348 5.9E-131 T 22-04-2016 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Pfam PF02805 Metal binding domain of Ada 8 70 1.1E-30 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Gene3D G3DSA:3.40.10.10 5 83 9.0E-34 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Gene3D G3DSA:1.10.10.10 265 350 1.3E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 SMART SM00342 96 178 2.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Gene3D G3DSA:1.10.10.60 84 134 7.0E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Gene3D G3DSA:1.10.10.60 135 176 2.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 267 347 4.5E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Gene3D G3DSA:3.30.160.70 177 264 3.3E-33 T 22-04-2016 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 SUPERFAMILY SSF53155 186 264 7.46E-20 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 187 262 2.4E-4 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 316 322 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 PIRSF PIRSF000409 1 354 2.0E-143 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 SUPERFAMILY SSF57884 6 88 2.22E-31 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 266 345 3.2E-35 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS00440 74e66c5843bb10dfb841deb0477ab798 354 SUPERFAMILY SSF46767 265 347 3.66E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 PANTHER PTHR10133 1 249 1.7E-180 T 22-04-2016 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 SUPERFAMILY SSF47807 160 241 4.64E-21 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 6.1E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 PANTHER PTHR10133:SF39 1 249 1.7E-180 T 22-04-2016 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 SUPERFAMILY SSF88723 4 159 7.36E-41 T 22-04-2016 IPR029060 PIN domain-like YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 Gene3D G3DSA:3.40.50.1010 4 174 5.7E-51 T 22-04-2016 IPR029060 PIN domain-like YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 Gene3D G3DSA:1.10.150.20 175 235 8.0E-23 T 22-04-2016 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 SMART SM00279 162 197 2.1E-9 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 SMART SM00475 3 250 2.4E-92 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.106 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 YPTB_RS16315 891854477ecffdb5265be2d017718d00 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 159 1.0E-31 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 Gene3D G3DSA:3.40.50.2300 173 330 2.5E-34 T 22-04-2016 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 PANTHER PTHR30146 1 336 3.6E-231 T 22-04-2016 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 1.7E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.9E-149 T 22-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 PANTHER PTHR30146:SF25 1 336 3.6E-231 T 22-04-2016 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 SUPERFAMILY SSF53822 60 314 3.73E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 5.2E-14 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 Gene3D G3DSA:1.10.260.40 1 55 2.4E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 SUPERFAMILY SSF47413 2 58 2.38E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 Gene3D G3DSA:3.40.50.2300 56 172 1.0E-31 T 22-04-2016 YPTB_RS03800 79bd111a8f343d6b4852f24471a5a26d 336 SMART SM00354 1 73 2.9E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS01810 ae345e3f56207a137866f7ac42909cde 275 PANTHER PTHR32552:SF26 4 270 1.8E-138 T 22-04-2016 YPTB_RS01810 ae345e3f56207a137866f7ac42909cde 275 Gene3D G3DSA:3.30.420.10 106 263 2.2E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS01810 ae345e3f56207a137866f7ac42909cde 275 Pfam PF13683 Integrase core domain 197 262 2.9E-27 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS01810 ae345e3f56207a137866f7ac42909cde 275 SUPERFAMILY SSF53098 106 269 2.78E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS01810 ae345e3f56207a137866f7ac42909cde 275 Pfam PF13276 HTH-like domain 40 95 1.3E-11 T 22-04-2016 IPR025948 HTH-like domain YPTB_RS01810 ae345e3f56207a137866f7ac42909cde 275 PANTHER PTHR32552 4 270 1.8E-138 T 22-04-2016 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 Gene3D G3DSA:1.10.3090.10 122 360 1.0E-57 T 22-04-2016 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 6.5E-16 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 PANTHER PTHR13734 1 380 1.6E-81 T 22-04-2016 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 SUPERFAMILY SSF81891 120 409 4.84E-58 T 22-04-2016 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 Gene3D G3DSA:3.30.460.10 2 121 2.6E-28 T 22-04-2016 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 Pfam PF01743 Poly A polymerase head domain 3 122 6.9E-17 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 PIRSF PIRSF000813 1 408 1.5E-200 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.042 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 SMART SM00471 224 359 5.6E-4 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 Pfam PF01966 HD domain 229 310 3.2E-13 T 22-04-2016 IPR006674 HD domain YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 SUPERFAMILY SSF81301 1 119 1.09E-29 T 22-04-2016 YPTB_RS18440 35c1d9b0e146d2f09661aca222d01f4a 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.604 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 Gene3D G3DSA:1.10.10.10 86 131 8.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 Gene3D G3DSA:1.10.10.10 132 179 8.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 Gene3D G3DSA:1.10.10.10 5 32 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 Gene3D G3DSA:1.10.10.10 69 85 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 PANTHER PTHR33602:SF1 63 176 1.8E-51 T 22-04-2016 YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 PANTHER PTHR33602:SF1 1 26 1.8E-51 T 22-04-2016 YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 PANTHER PTHR33602 63 176 1.8E-51 T 22-04-2016 YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 PANTHER PTHR33602 1 26 1.8E-51 T 22-04-2016 YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 Hamap MF_01114 Regulatory protein RecX [recX]. 2 182 15.088 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 YPTB_RS04560 f191954e0649c174e6ca97ab4c69e169 182 Pfam PF02631 RecX family 67 178 7.0E-32 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 Gene3D G3DSA:3.40.720.10 1 113 1.3E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 Gene3D G3DSA:3.40.720.10 240 407 1.3E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 PIRSF PIRSF001491 1 407 2.7E-167 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 PANTHER PTHR21110:SF0 2 407 1.6E-170 T 22-04-2016 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 SUPERFAMILY SSF53649 1 114 1.31E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 SUPERFAMILY SSF53649 236 407 1.31E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 PANTHER PTHR21110 2 407 1.6E-170 T 22-04-2016 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 Pfam PF01676 Metalloenzyme superfamily 2 398 2.3E-44 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 5.1E-196 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 SUPERFAMILY SSF143856 117 235 2.09E-50 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.299 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPTB_RS03300 f72953eaa3ee31116a9f2168ebd3afb4 407 Gene3D G3DSA:3.30.70.1250 114 235 4.2E-53 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 SUPERFAMILY SSF100950 76 237 3.63E-31 T 22-04-2016 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 Gene3D G3DSA:1.10.10.10 4 54 5.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 SMART SM01134 74 235 4.0E-67 T 22-04-2016 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 Pfam PF00455 DeoR C terminal sensor domain 77 234 1.7E-51 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 2.1E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 2.1E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 PANTHER PTHR30363:SF11 1 257 3.3E-139 T 22-04-2016 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 SUPERFAMILY SSF46785 6 59 1.63E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 PANTHER PTHR30363 1 257 3.3E-139 T 22-04-2016 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 Pfam PF08220 DeoR-like helix-turn-helix domain 7 58 8.2E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 Gene3D G3DSA:3.40.50.1360 79 217 1.9E-14 T 22-04-2016 YPTB_RS16645 a470ebf96bb16239c575091472721c65 258 SMART SM00420 7 59 3.4E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS17680 7cf338c295d24695a6f46442e2220594 442 PANTHER PTHR23024:SF198 46 107 7.0E-42 T 22-04-2016 YPTB_RS17680 7cf338c295d24695a6f46442e2220594 442 PANTHER PTHR23024 46 107 7.0E-42 T 22-04-2016 YPTB_RS17680 7cf338c295d24695a6f46442e2220594 442 Gene3D G3DSA:3.50.50.60 84 203 4.6E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17680 7cf338c295d24695a6f46442e2220594 442 SUPERFAMILY SSF51905 168 332 1.3E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17680 7cf338c295d24695a6f46442e2220594 442 SUPERFAMILY SSF51905 1 226 8.85E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17680 7cf338c295d24695a6f46442e2220594 442 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 333 2.1E-110 T 22-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.104 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 Gene3D G3DSA:3.40.1110.10 322 448 5.5E-55 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 683 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PANTHER PTHR24093 8 593 0.0 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PANTHER PTHR24093 631 687 0.0 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 SUPERFAMILY SSF81660 322 456 5.89E-37 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 Pfam PF00122 E1-E2 ATPase 72 302 1.7E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 1.3E-48 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 1.1E-33 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 SUPERFAMILY SSF56784 299 323 1.27E-38 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 SUPERFAMILY SSF56784 383 410 1.27E-38 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 SUPERFAMILY SSF56784 441 565 1.27E-38 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 4.2E-36 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PANTHER PTHR24093:SF49 8 593 0.0 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 PANTHER PTHR24093:SF49 631 687 0.0 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 Gene3D G3DSA:2.70.150.10 54 208 7.0E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 Gene3D G3DSA:3.40.50.1000 449 569 2.8E-35 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 SUPERFAMILY SSF81653 115 207 1.7E-20 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 SUPERFAMILY SSF81665 33 103 7.85E-10 T 22-04-2016 YPTB_RS15770 a435e54730e581402cb4712016a90c09 688 SUPERFAMILY SSF81665 208 305 7.85E-10 T 22-04-2016 YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 Pfam PF00005 ABC transporter 36 177 2.3E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 Gene3D G3DSA:3.40.50.300 11 254 6.4E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 PANTHER PTHR24220:SF481 21 331 4.4E-205 T 22-04-2016 YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.1E-146 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 SMART SM00382 44 227 1.5E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 Pfam PF08402 TOBE domain 295 375 3.4E-20 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 PANTHER PTHR24220 21 331 4.4E-205 T 22-04-2016 YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 SUPERFAMILY SSF50331 252 375 2.28E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS07530 68ff700802ade253dec780e778cbeeba 377 SUPERFAMILY SSF52540 19 257 1.02E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Gene3D G3DSA:2.40.50.140 4 68 4.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SMART SM00357 6 70 1.1E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SUPERFAMILY SSF50249 2 69 1.43E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PANTHER PTHR11544:SF65 1 70 8.7E-45 T 22-04-2016 YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PIRSF PIRSF002599 1 70 1.3E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PANTHER PTHR11544 1 70 8.7E-45 T 22-04-2016 YPTB_RS13135 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.3E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 PANTHER PTHR10584:SF166 1 306 4.1E-113 T 22-04-2016 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 PRINTS PR00990 Ribokinase signature 35 54 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 PRINTS PR00990 Ribokinase signature 175 190 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 PRINTS PR00990 Ribokinase signature 219 230 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 PRINTS PR00990 Ribokinase signature 8 29 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 PRINTS PR00990 Ribokinase signature 107 120 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 2.8E-113 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 Gene3D G3DSA:3.40.1190.20 5 306 6.3E-101 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 3.0E-78 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 PANTHER PTHR10584 1 306 4.1E-113 T 22-04-2016 YPTB_RS00110 e0d228d05b3b49cb549d5a5f4623e003 308 SUPERFAMILY SSF53613 5 304 2.96E-86 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS02925 6861f3a202a092d68752e78d291048e6 293 PIRSF PIRSF011468 1 288 2.0E-165 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 YPTB_RS02925 6861f3a202a092d68752e78d291048e6 293 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 1.7E-146 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 YPTB_RS07025 c92f6cd5e3fa12f16bdbd2a0f462533e 159 Pfam PF06530 Phage antitermination protein Q 20 140 8.1E-41 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YPTB_RS06365 0d8aad14b395aa6cfda647c91a42682b 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.3E-192 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YPTB_RS06365 0d8aad14b395aa6cfda647c91a42682b 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 2.7E-110 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YPTB_RS06365 0d8aad14b395aa6cfda647c91a42682b 379 PIRSF PIRSF000267 2 378 1.1E-130 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YPTB_RS06365 0d8aad14b395aa6cfda647c91a42682b 379 PANTHER PTHR30365:SF6 1 379 2.4E-201 T 22-04-2016 YPTB_RS06365 0d8aad14b395aa6cfda647c91a42682b 379 PANTHER PTHR30365 1 379 2.4E-201 T 22-04-2016 YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 Pfam PF00106 short chain dehydrogenase 2 187 7.0E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PANTHER PTHR24322:SF392 5 131 1.2E-86 T 22-04-2016 YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PANTHER PTHR24322:SF392 147 179 1.2E-86 T 22-04-2016 YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 SUPERFAMILY SSF51735 3 224 7.69E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PANTHER PTHR24322 5 131 1.2E-86 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PANTHER PTHR24322 147 179 1.2E-86 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.1E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.1E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.1E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11980 1e4d9c4c01e65e82fd17207fc0192d3b 249 Gene3D G3DSA:3.40.50.720 2 232 1.6E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 Gene3D G3DSA:2.30.38.10 284 360 6.7E-24 T 22-04-2016 YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 Pfam PF00550 Phosphopantetheine attachment site 481 542 1.3E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 107 118 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 Gene3D G3DSA:3.30.300.30 365 483 3.8E-23 T 22-04-2016 YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 SUPERFAMILY SSF56801 1 493 8.37E-115 T 22-04-2016 YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 Gene3D G3DSA:3.40.50.980 1 116 1.6E-27 T 22-04-2016 YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 Pfam PF00501 AMP-binding enzyme 1 369 1.9E-82 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 Gene3D G3DSA:1.10.1200.10 484 551 1.6E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 Gene3D G3DSA:3.40.50.980 117 283 2.2E-41 T 22-04-2016 YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 PANTHER PTHR24095 1 450 8.1E-157 T 22-04-2016 YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2 394 4.2E-108 T 22-04-2016 IPR010071 Amino acid adenylation domain YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 SUPERFAMILY SSF47336 474 542 6.67E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17835 a43561e0e6381f4b96bd1e643e0ddb03 562 PANTHER PTHR24095:SF137 1 450 8.1E-157 T 22-04-2016 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 SUPERFAMILY SSF46955 1 126 7.69E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 SMART SM00422 1 70 4.0E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 PANTHER PTHR30204:SF16 1 137 3.8E-83 T 22-04-2016 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 6.8E-57 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 PANTHER PTHR30204 1 137 3.8E-83 T 22-04-2016 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 Gene3D G3DSA:1.10.1660.10 56 131 9.3E-26 T 22-04-2016 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.4E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS05645 cb1980e65a7ca669890bc807aff85674 139 Gene3D G3DSA:1.10.1660.10 1 55 3.5E-24 T 22-04-2016 YPTB_RS04570 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPTB_RS04570 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 PANTHER PTHR34984 1 61 1.3E-33 T 22-04-2016 YPTB_RS04570 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 PANTHER PTHR34984:SF1 1 61 1.3E-33 T 22-04-2016 YPTB_RS04570 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPTB_RS04570 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.462 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPTB_RS04570 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPTB_RS04570 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 22-04-2016 YPTB_RS11535 74ee6d63e049c7d07b09290a577f9049 302 PANTHER PTHR30465:SF9 17 302 2.2E-142 T 22-04-2016 YPTB_RS11535 74ee6d63e049c7d07b09290a577f9049 302 PANTHER PTHR30465 17 302 2.2E-142 T 22-04-2016 YPTB_RS11535 74ee6d63e049c7d07b09290a577f9049 302 Gene3D G3DSA:1.10.3720.10 102 299 1.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11535 74ee6d63e049c7d07b09290a577f9049 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 71 1.2E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB_RS11535 74ee6d63e049c7d07b09290a577f9049 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 3.1E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11535 74ee6d63e049c7d07b09290a577f9049 302 SUPERFAMILY SSF161098 100 283 1.96E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14540 002a7b7b954df161a90967e114498354 349 Pfam PF00005 ABC transporter 19 163 2.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS14540 002a7b7b954df161a90967e114498354 349 SUPERFAMILY SSF50331 252 340 9.07E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS14540 002a7b7b954df161a90967e114498354 349 SMART SM00382 28 213 2.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS14540 002a7b7b954df161a90967e114498354 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS14540 002a7b7b954df161a90967e114498354 349 PANTHER PTHR24220 261 287 5.4E-134 T 22-04-2016 YPTB_RS14540 002a7b7b954df161a90967e114498354 349 PANTHER PTHR24220 5 242 5.4E-134 T 22-04-2016 YPTB_RS14540 002a7b7b954df161a90967e114498354 349 SUPERFAMILY SSF52540 4 242 3.77E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14540 002a7b7b954df161a90967e114498354 349 Gene3D G3DSA:3.40.50.300 4 235 3.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14540 002a7b7b954df161a90967e114498354 349 PANTHER PTHR24220:SF282 261 287 5.4E-134 T 22-04-2016 YPTB_RS14540 002a7b7b954df161a90967e114498354 349 PANTHER PTHR24220:SF282 5 242 5.4E-134 T 22-04-2016 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 PANTHER PTHR11349 1 140 3.9E-77 T 22-04-2016 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 Gene3D G3DSA:3.30.70.141 1 139 8.5E-60 T 22-04-2016 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.245 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 4.4E-56 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 8.4E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 8.4E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 8.4E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 8.4E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 8.4E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 SUPERFAMILY SSF54919 1 139 9.56E-59 T 22-04-2016 YPTB_RS15395 32b4f48aa1a4501f8c046f6863a8781c 142 SMART SM00562 3 140 1.1E-84 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15935 0a380c44ab74895b3ed3453658ac8feb 268 Gene3D G3DSA:3.40.50.300 20 243 3.6E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15935 0a380c44ab74895b3ed3453658ac8feb 268 SMART SM00382 35 223 4.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS15935 0a380c44ab74895b3ed3453658ac8feb 268 Pfam PF00005 ABC transporter 26 175 2.7E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS15935 0a380c44ab74895b3ed3453658ac8feb 268 PANTHER PTHR24220 12 260 3.3E-172 T 22-04-2016 YPTB_RS15935 0a380c44ab74895b3ed3453658ac8feb 268 PANTHER PTHR24220:SF505 12 260 3.3E-172 T 22-04-2016 YPTB_RS15935 0a380c44ab74895b3ed3453658ac8feb 268 SUPERFAMILY SSF52540 23 236 6.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 59 118 6.6E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 PANTHER PTHR11615 354 816 0.0 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 PANTHER PTHR11615 7 322 0.0 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 816 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Pfam PF01568 Molydopterin dinucleotide binding domain 697 808 1.0E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Gene3D G3DSA:3.40.50.740 441 520 2.1E-45 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Gene3D G3DSA:3.40.50.740 119 209 2.1E-45 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Gene3D G3DSA:2.40.40.20 672 816 3.0E-54 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 SMART SM00926 58 118 2.6E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Gene3D G3DSA:2.20.25.90 56 118 3.2E-16 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 63 81 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 519 536 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 SUPERFAMILY SSF53706 59 699 2.75E-175 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Gene3D G3DSA:3.40.228.10 216 440 2.1E-89 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 733 760 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 SUPERFAMILY SSF50692 643 816 4.75E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Pfam PF00384 Molybdopterin oxidoreductase 121 576 3.4E-107 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 PANTHER PTHR11615:SF128 354 816 0.0 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 PANTHER PTHR11615:SF128 7 322 0.0 T 22-04-2016 YPTB_RS04465 cde99a300ee017fcc37b509c1ce9f6b1 816 Gene3D G3DSA:3.90.55.10 521 622 1.6E-22 T 22-04-2016 YPTB_RS14635 840205d73be1228be5d8a39133c64674 329 PANTHER PTHR11732 13 329 1.5E-188 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS14635 840205d73be1228be5d8a39133c64674 329 SUPERFAMILY SSF51430 13 327 1.7E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS14635 840205d73be1228be5d8a39133c64674 329 Gene3D G3DSA:3.20.20.100 13 327 1.8E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS14635 840205d73be1228be5d8a39133c64674 329 PANTHER PTHR11732:SF191 13 329 1.5E-188 T 22-04-2016 YPTB_RS14635 840205d73be1228be5d8a39133c64674 329 Pfam PF00248 Aldo/keto reductase family 28 328 9.0E-68 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 PIRSF PIRSF000382 7 763 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 Gene3D G3DSA:3.20.20.210 395 761 9.6E-135 T 22-04-2016 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 13 761 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 SUPERFAMILY SSF51726 399 761 8.89E-119 T 22-04-2016 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 SUPERFAMILY SSF51726 10 397 1.96E-113 T 22-04-2016 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 PANTHER PTHR30519:SF0 6 763 0.0 T 22-04-2016 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 PANTHER PTHR30519 6 763 0.0 T 22-04-2016 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 Gene3D G3DSA:3.20.20.210 10 392 2.0E-151 T 22-04-2016 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 8 761 37.592 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 434 756 8.9E-160 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPTB_RS01455 3df7b2f2cde0f5d2e445b072887b2208 763 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 10 318 5.5E-127 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 680 720 9.2E-5 T 22-04-2016 IPR006530 YD repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 642 678 1.0E-5 T 22-04-2016 IPR006530 YD repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 414 440 0.001 T 22-04-2016 IPR006530 YD repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 865 904 1.9E-4 T 22-04-2016 IPR006530 YD repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 722 761 3.3E-6 T 22-04-2016 IPR006530 YD repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 Pfam PF05593 RHS Repeat 640 671 6.6E-7 T 22-04-2016 IPR031325 RHS repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 Pfam PF05593 RHS Repeat 865 901 2.8E-5 T 22-04-2016 IPR031325 RHS repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 Pfam PF05593 RHS Repeat 662 695 4.4E-6 T 22-04-2016 IPR031325 RHS repeat YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 PANTHER PTHR32305:SF6 30 953 0.0 T 22-04-2016 YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 PANTHER PTHR32305 30 953 0.0 T 22-04-2016 YPTB_RS19585 033f2d1c04c95dbfb2ec524bde4e660f 953 Pfam PF05488 PAAR motif 83 149 2.6E-13 T 22-04-2016 IPR008727 PAAR motif YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 SMART SM00382 36 179 9.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 228 237 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 Pfam PF00158 Sigma-54 interaction domain 18 183 8.5E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 SUPERFAMILY SSF46689 228 330 5.38E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 SUPERFAMILY SSF52540 26 254 1.82E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 102 117 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 Gene3D G3DSA:1.10.8.60 189 262 1.5E-20 T 22-04-2016 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 314 334 1.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 314 1.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 Pfam PF02954 Bacterial regulatory protein, Fis family 296 329 3.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 PANTHER PTHR32071 12 339 2.2E-180 T 22-04-2016 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 Gene3D G3DSA:3.40.50.300 14 188 4.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 40 53 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 Gene3D G3DSA:1.10.10.60 296 328 2.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS18110 a6079be80e5e0f206725d5b73e1f5275 342 PANTHER PTHR32071:SF21 12 339 2.2E-180 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 PANTHER PTHR30251:SF2 10 267 9.9E-111 T 22-04-2016 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 Gene3D G3DSA:2.60.40.1070 172 261 2.0E-11 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 39 166 1.2E-38 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 PANTHER PTHR30251 10 267 9.9E-111 T 22-04-2016 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 SUPERFAMILY SSF49584 160 262 8.9E-12 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 120 137 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 SUPERFAMILY SSF49354 34 166 3.14E-36 T 22-04-2016 IPR008962 PapD-like YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 Gene3D G3DSA:2.60.40.360 39 166 4.1E-39 T 22-04-2016 IPR008962 PapD-like YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 PRINTS PR00969 Pili chaperone signature 121 138 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 PRINTS PR00969 Pili chaperone signature 148 163 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 PRINTS PR00969 Pili chaperone signature 187 202 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 PRINTS PR00969 Pili chaperone signature 91 112 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 PRINTS PR00969 Pili chaperone signature 40 49 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12900 1069e2c7778236e89d42f37fea20d03c 267 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 192 258 7.0E-12 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 SUPERFAMILY SSF53335 74 525 9.86E-126 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 SUPERFAMILY SSF53335 4 43 9.86E-126 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 PANTHER PTHR30408 162 506 2.6E-102 T 22-04-2016 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 PANTHER PTHR30408:SF4 162 506 2.6E-102 T 22-04-2016 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 Pfam PF12161 HsdM N-terminal domain 6 150 1.9E-15 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 227 7.6E-20 T 22-04-2016 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 7.6E-20 T 22-04-2016 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 7.6E-20 T 22-04-2016 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 7.6E-20 T 22-04-2016 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 4 486 1.4E-100 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 Pfam PF02384 N-6 DNA Methylase 162 477 3.6E-99 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS03050 ce3c66942e8d914a17d3f19ae5780321 863 Gene3D G3DSA:3.40.50.150 187 431 8.7E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 PANTHER PTHR24031:SF0 1 449 8.6E-197 T 22-04-2016 YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 Pfam PF00271 Helicase conserved C-terminal domain 235 339 1.0E-25 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 PANTHER PTHR24031 1 449 8.6E-197 T 22-04-2016 YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 SMART SM00487 20 223 4.7E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 SMART SM00490 259 340 2.3E-32 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 51.088 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 Gene3D G3DSA:3.40.50.300 1 212 4.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 Gene3D G3DSA:3.40.50.300 213 374 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 Pfam PF00270 DEAD/DEAH box helicase 25 195 2.0E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS06725 28231969e49d95f5a02fc1391fb64d98 451 SUPERFAMILY SSF52540 75 361 2.96E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 Pfam PF01047 MarR family 29 87 5.0E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 PANTHER PTHR33164:SF16 2 141 3.7E-25 T 22-04-2016 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 36.707 T 22-04-2016 IPR023071 Transcriptional regulator, SlyA YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 SMART SM00347 22 123 3.9E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 PANTHER PTHR33164 2 141 3.7E-25 T 22-04-2016 YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 SUPERFAMILY SSF46785 4 139 5.41E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site YPTB_RS12465 36ffde40e4aaaf2701b5fe41a53464bd 143 Gene3D G3DSA:1.10.10.10 2 137 1.5E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 SUPERFAMILY SSF52540 4 286 1.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.5E-73 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 PANTHER PTHR10285:SF72 1 275 7.9E-157 T 22-04-2016 YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 Gene3D G3DSA:3.40.50.300 1 288 1.9E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20155 7f10256aa05658e9aad314bec0fe9476 289 PANTHER PTHR10285 1 275 7.9E-157 T 22-04-2016 YPTB_RS11080 ab978e509b3480bebb13bdffe429d1ea 245 PANTHER PTHR36928 1 245 1.3E-115 T 22-04-2016 YPTB_RS11080 ab978e509b3480bebb13bdffe429d1ea 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.351 T 22-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 YPTB_RS11080 ab978e509b3480bebb13bdffe429d1ea 245 Gene3D G3DSA:3.20.20.140 1 235 4.8E-59 T 22-04-2016 YPTB_RS11080 ab978e509b3480bebb13bdffe429d1ea 245 SMART SM00481 4 78 1.4E-15 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YPTB_RS11080 ab978e509b3480bebb13bdffe429d1ea 245 SUPERFAMILY SSF89550 3 241 7.98E-62 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPTB_RS11080 ab978e509b3480bebb13bdffe429d1ea 245 Pfam PF02811 PHP domain 5 80 9.9E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 YPTB_RS17515 22a8676657863ada1c22c1f5f945da3e 102 SUPERFAMILY SSF56349 26 91 1.03E-13 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS17515 22a8676657863ada1c22c1f5f945da3e 102 Pfam PF00589 Phage integrase family 22 81 3.6E-10 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS17515 22a8676657863ada1c22c1f5f945da3e 102 Gene3D G3DSA:1.10.443.10 23 95 9.5E-15 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 Pfam PF13533 Biotin-lipoyl like 47 95 1.1E-18 T 22-04-2016 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 56.376 T 22-04-2016 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 PANTHER PTHR30367 1 309 1.1E-213 T 22-04-2016 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 270 5.4E-31 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 Pfam PF13437 HlyD family secretion protein 156 239 3.1E-9 T 22-04-2016 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 Gene3D G3DSA:2.40.50.100 47 80 7.5E-18 T 22-04-2016 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 Gene3D G3DSA:2.40.50.100 154 187 7.5E-18 T 22-04-2016 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 PANTHER PTHR30367:SF3 1 309 1.1E-213 T 22-04-2016 YPTB_RS19190 573b1987a36233f8dfc9e856541151d2 311 SUPERFAMILY SSF111369 46 231 1.07E-21 T 22-04-2016 YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 Pfam PF09313 Domain of unknown function (DUF1971) 16 96 2.0E-30 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 PANTHER PTHR10108 6 282 1.1E-110 T 22-04-2016 YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 Gene3D G3DSA:2.60.120.10 10 115 1.3E-49 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 Gene3D G3DSA:3.40.50.150 116 293 1.7E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 PIRSF PIRSF005215 1 295 4.3E-150 T 22-04-2016 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 Pfam PF03848 Tellurite resistance protein TehB 98 290 2.7E-112 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 SUPERFAMILY SSF51197 10 109 3.43E-37 T 22-04-2016 YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 PANTHER PTHR10108:SF927 6 282 1.1E-110 T 22-04-2016 YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 56 293 4.0E-110 T 22-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 YPTB_RS10685 15966b8b8bc4e3e67cb30a2e5674cee7 295 SUPERFAMILY SSF53335 75 282 6.39E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 PANTHER PTHR21581 13 310 8.1E-187 T 22-04-2016 YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 SUPERFAMILY SSF56601 3 281 1.84E-62 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 265 4.7E-82 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 PANTHER PTHR21581:SF8 13 310 8.1E-187 T 22-04-2016 YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 2.5E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 2.5E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 2.5E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS06745 542038951e932867da91c35f4d8f8e3c 311 Gene3D G3DSA:3.40.710.10 12 281 2.8E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 3.1E-111 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 Gene3D G3DSA:3.40.50.150 1 280 2.9E-119 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 SUPERFAMILY SSF53335 9 279 4.0E-100 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 PANTHER PTHR37426:SF1 2 280 3.6E-166 T 22-04-2016 YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.75 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YPTB_RS20640 de6a60228fd47608670eddb5cc047074 280 PANTHER PTHR37426 2 280 3.6E-166 T 22-04-2016 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF00571 CBS domain 242 296 4.6E-5 T 22-04-2016 IPR000644 CBS domain YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF01769 Divalent cation transporter 362 484 2.9E-23 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF158791 57 173 1.26E-22 T 22-04-2016 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 TIGRFAM TIGR00400 mgtE: magnesium transporter 63 490 1.8E-77 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 SMART SM00924 75 178 3.4E-31 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:1.25.60.10 50 169 5.4E-21 T 22-04-2016 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:1.10.357.20 320 490 2.0E-52 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF161093 319 490 1.28E-47 T 22-04-2016 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF54631 177 316 1.3E-24 T 22-04-2016 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:3.10.580.10 170 300 1.6E-15 T 22-04-2016 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 PANTHER PTHR11911:SF23 155 471 1.0E-43 T 22-04-2016 YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF03448 MgtE intracellular N domain 75 175 5.0E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain YPTB_RS15185 370f2351a8f3fe8206c61b7187c3b58e 491 PANTHER PTHR11911 155 471 1.0E-43 T 22-04-2016 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 Gene3D G3DSA:1.10.1040.10 282 488 3.4E-75 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 SUPERFAMILY SSF48179 283 487 9.18E-66 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 SUPERFAMILY SSF51735 3 282 1.18E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.6E-42 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 Gene3D G3DSA:3.40.50.720 6 281 1.9E-107 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 PANTHER PTHR30562 1 488 0.0 T 22-04-2016 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 3.5E-95 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPTB_RS07275 ba3a9a738b8a05640d5a2e657df3054a 490 PANTHER PTHR30562:SF7 1 488 0.0 T 22-04-2016 YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:1.10.3210.10 594 674 7.0E-5 T 22-04-2016 IPR006674 HD domain YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 SMART SM00471 604 914 1.3E-4 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:3.30.450.20 170 229 2.6E-13 T 22-04-2016 YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:3.30.450.20 88 125 2.6E-13 T 22-04-2016 YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 SUPERFAMILY SSF109604 600 682 2.8E-8 T 22-04-2016 YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 SUPERFAMILY SSF55781 438 588 1.44E-6 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 SUPERFAMILY SSF109604 834 938 1.19E-6 T 22-04-2016 YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:3.30.450.40 418 589 6.4E-4 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS09395 003ad78cb36bb37e2bb103823937bc75 984 Pfam PF13487 HD domain 831 896 2.3E-20 T 22-04-2016 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Pfam PF00258 Flavodoxin 67 195 2.1E-31 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 SUPERFAMILY SSF63380 246 465 1.6E-63 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 SUPERFAMILY SSF52218 63 209 1.84E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Gene3D G3DSA:1.20.990.10 300 402 1.4E-37 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PIRSF PIRSF000207 1 618 4.4E-271 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Gene3D G3DSA:3.40.50.80 474 617 1.6E-58 T 22-04-2016 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Pfam PF00667 FAD binding domain 249 443 7.9E-28 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 289 299 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 567 575 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 513 524 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 405 412 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 438 447 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 544 560 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 500 509 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 475 494 4.2E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Gene3D G3DSA:2.40.30.10 403 473 2.2E-40 T 22-04-2016 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Gene3D G3DSA:2.40.30.10 247 299 2.2E-40 T 22-04-2016 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PANTHER PTHR19384:SF76 62 618 3.3E-230 T 22-04-2016 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 618 51.622 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PANTHER PTHR19384 62 618 3.3E-230 T 22-04-2016 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 618 1.4E-267 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Gene3D G3DSA:3.40.50.360 59 210 6.6E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 SUPERFAMILY SSF52343 463 618 7.33E-52 T 22-04-2016 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00369 Flavodoxin signature 169 188 4.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00369 Flavodoxin signature 65 78 4.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00369 Flavodoxin signature 113 124 4.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 PRINTS PR00369 Flavodoxin signature 145 155 4.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS04220 21e0043279f20ffd5b15f9b3c770c174 618 Pfam PF00175 Oxidoreductase NAD-binding domain 476 582 1.6E-20 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SMART SM00411 3 92 2.2E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Gene3D G3DSA:4.10.520.10 2 93 6.4E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.7E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PANTHER PTHR33175:SF2 2 98 4.8E-56 T 22-04-2016 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 1.4E-53 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SUPERFAMILY SSF47729 3 92 2.21E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PANTHER PTHR33175 2 98 4.8E-56 T 22-04-2016 YPTB_RS12725 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.046 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:2.40.30.10 209 298 1.6E-36 T 22-04-2016 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF52540 6 219 8.65E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.7E-59 T 22-04-2016 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.2E-237 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.3E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.224 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:3.40.50.300 3 208 6.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 PANTHER PTHR23115:SF151 1 393 0.0 T 22-04-2016 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 PANTHER PTHR23115 1 393 0.0 T 22-04-2016 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF50447 205 301 1.75E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF50465 298 393 1.78E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:2.40.30.10 300 393 1.4E-46 T 22-04-2016 YPTB_RS01645 6722da5c5b244a10848ad71305d92091 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 110 135 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 5.8E-99 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 Pfam PF10135 Rod binding protein 49 95 2.3E-16 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.6E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 SMART SM00047 140 306 1.6E-42 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PANTHER PTHR33308:SF3 13 314 2.2E-56 T 22-04-2016 YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 295 1.7E-107 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- YPTB_RS09250 62de33f264b731dbbcd39968341644e9 314 PANTHER PTHR33308 13 314 2.2E-56 T 22-04-2016 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 SUPERFAMILY SSF53720 13 469 1.1E-120 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 PANTHER PTHR11699:SF197 1 475 0.0 T 22-04-2016 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 17 500 1.5E-263 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 15 500 58.282 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 Pfam PF00171 Aldehyde dehydrogenase family 28 472 3.9E-119 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 PANTHER PTHR11699 1 475 0.0 T 22-04-2016 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 Gene3D G3DSA:3.40.605.10 16 271 2.4E-73 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS10760 bad807d28d4056c8e3d4daa1e6df6e83 505 Gene3D G3DSA:3.40.309.10 272 462 3.5E-41 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS16110 aa465b4bf5d0659069b05f7d8df2924f 217 Gene3D G3DSA:1.10.3720.10 9 214 6.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16110 aa465b4bf5d0659069b05f7d8df2924f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 8.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16110 aa465b4bf5d0659069b05f7d8df2924f 217 PANTHER PTHR30450:SF1 1 217 1.1E-123 T 22-04-2016 YPTB_RS16110 aa465b4bf5d0659069b05f7d8df2924f 217 PANTHER PTHR30450 1 217 1.1E-123 T 22-04-2016 YPTB_RS16110 aa465b4bf5d0659069b05f7d8df2924f 217 SUPERFAMILY SSF161098 9 201 1.06E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SUPERFAMILY SSF52540 70 254 7.12E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 193 207 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 105 123 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Gene3D G3DSA:3.40.50.300 70 234 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PIRSF PIRSF003073 1 257 6.7E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Pfam PF01695 IstB-like ATP binding protein 56 235 6.8E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SMART SM00382 101 235 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20940 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PANTHER PTHR30050 1 250 4.6E-72 T 22-04-2016 YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SUPERFAMILY SSF52540 70 254 7.12E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 193 207 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 105 123 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Gene3D G3DSA:3.40.50.300 70 234 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PIRSF PIRSF003073 1 257 6.7E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Pfam PF01695 IstB-like ATP binding protein 56 235 6.8E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SMART SM00382 101 235 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08725 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PANTHER PTHR30050 1 250 4.6E-72 T 22-04-2016 YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SUPERFAMILY SSF52540 70 254 7.12E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 193 207 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 105 123 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Gene3D G3DSA:3.40.50.300 70 234 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PIRSF PIRSF003073 1 257 6.7E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Pfam PF01695 IstB-like ATP binding protein 56 235 6.8E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SMART SM00382 101 235 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS09970 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PANTHER PTHR30050 1 250 4.6E-72 T 22-04-2016 YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SUPERFAMILY SSF52540 70 254 7.12E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 193 207 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 105 123 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Gene3D G3DSA:3.40.50.300 70 234 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PIRSF PIRSF003073 1 257 6.7E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Pfam PF01695 IstB-like ATP binding protein 56 235 6.8E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SMART SM00382 101 235 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01815 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PANTHER PTHR30050 1 250 4.6E-72 T 22-04-2016 YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SUPERFAMILY SSF52540 70 254 7.12E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 193 207 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 105 123 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Gene3D G3DSA:3.40.50.300 70 234 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PIRSF PIRSF003073 1 257 6.7E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 Pfam PF01695 IstB-like ATP binding protein 56 235 6.8E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 SMART SM00382 101 235 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06270 5f6e6a5ce55767ab59aa7753bdc47c0a 259 PANTHER PTHR30050 1 250 4.6E-72 T 22-04-2016 YPTB_RS09480 b0f919a79b9194d96f18494584bcadee 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 8.8E-229 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 YPTB_RS09480 b0f919a79b9194d96f18494584bcadee 494 Pfam PF00474 Sodium:solute symporter family 35 437 3.0E-139 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS09480 b0f919a79b9194d96f18494584bcadee 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 3.1E-123 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS09480 b0f919a79b9194d96f18494584bcadee 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS09480 b0f919a79b9194d96f18494584bcadee 494 PANTHER PTHR11819:SF148 4 486 6.4E-194 T 22-04-2016 YPTB_RS09480 b0f919a79b9194d96f18494584bcadee 494 PANTHER PTHR11819 4 486 6.4E-194 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS09480 b0f919a79b9194d96f18494584bcadee 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 PANTHER PTHR30194 1 169 1.9E-75 T 22-04-2016 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.828 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.2E-65 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 2.7E-80 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 Gene3D G3DSA:3.30.420.10 3 156 9.1E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPTB_RS11180 f7080578c14816d77898f28a8a81e08d 173 SUPERFAMILY SSF53098 3 156 4.55E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PIRSF PIRSF001529 1 430 5.6E-183 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 Gene3D G3DSA:3.30.930.10 105 427 7.0E-142 T 22-04-2016 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 5.4E-180 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.8E-30 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 42.014 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PANTHER PTHR11778 1 429 4.0E-222 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 406 7.1E-36 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 Gene3D G3DSA:1.10.287.40 1 104 9.0E-25 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 SUPERFAMILY SSF55681 116 425 3.14E-100 T 22-04-2016 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 PANTHER PTHR11778:SF0 1 429 4.0E-222 T 22-04-2016 YPTB_RS07755 9c6849038d944de22a72d80203744284 430 SUPERFAMILY SSF46589 1 112 7.32E-31 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YPTB_RS17600 2cb3742a4e9db2bc3527165825a51bde 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 448 6.2E-139 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS17600 2cb3742a4e9db2bc3527165825a51bde 450 PANTHER PTHR35566:SF3 1 450 0.0 T 22-04-2016 YPTB_RS17600 2cb3742a4e9db2bc3527165825a51bde 450 PANTHER PTHR35566 1 450 0.0 T 22-04-2016 YPTB_RS17600 2cb3742a4e9db2bc3527165825a51bde 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 447 7.8E-136 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS08185 2cb3742a4e9db2bc3527165825a51bde 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 448 6.2E-139 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS08185 2cb3742a4e9db2bc3527165825a51bde 450 PANTHER PTHR35566:SF3 1 450 0.0 T 22-04-2016 YPTB_RS08185 2cb3742a4e9db2bc3527165825a51bde 450 PANTHER PTHR35566 1 450 0.0 T 22-04-2016 YPTB_RS08185 2cb3742a4e9db2bc3527165825a51bde 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 447 7.8E-136 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 1.1E-74 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 PANTHER PTHR16301 1 200 6.7E-58 T 22-04-2016 IPR023582 Impact family YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 1.0E-13 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 SUPERFAMILY SSF54211 2 129 1.44E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 Gene3D G3DSA:3.30.230.30 5 130 6.0E-44 T 22-04-2016 IPR001498 Impact, N-terminal YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 1.2E-27 T 22-04-2016 IPR001498 Impact, N-terminal YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 SUPERFAMILY SSF54980 136 201 1.44E-16 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 Gene3D G3DSA:3.30.70.240 135 203 5.2E-25 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS01560 831446878b1cf76dfd3f34ea1cc3d3d9 203 PANTHER PTHR16301:SF0 1 200 6.7E-58 T 22-04-2016 YPTB_RS02650 195d794af91b38c8fec2ecbe19502dba 115 Gene3D G3DSA:1.10.10.10 2 74 5.5E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02650 195d794af91b38c8fec2ecbe19502dba 115 SUPERFAMILY SSF46955 3 74 1.46E-23 T 22-04-2016 IPR009061 Putative DNA-binding domain YPTB_RS02650 195d794af91b38c8fec2ecbe19502dba 115 Pfam PF02316 Mu DNA-binding domain 9 61 8.2E-14 T 22-04-2016 IPR003314 Mu-type HTH domain GO:0003677 YPTB_RS02795 628759738f8ff7de2f1077aa34b9f281 103 Pfam PF01381 Helix-turn-helix 42 91 2.9E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS02795 628759738f8ff7de2f1077aa34b9f281 103 Gene3D G3DSA:1.10.260.40 33 93 2.4E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS02795 628759738f8ff7de2f1077aa34b9f281 103 SMART SM00530 39 94 7.7E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS02795 628759738f8ff7de2f1077aa34b9f281 103 SUPERFAMILY SSF47413 30 92 7.78E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS20870 3a9424d934d2ce8693100ae2e7eb1f8a 166 PANTHER PTHR35810:SF1 1 165 4.6E-103 T 22-04-2016 YPTB_RS20870 3a9424d934d2ce8693100ae2e7eb1f8a 166 PANTHER PTHR35810 1 165 4.6E-103 T 22-04-2016 YPTB_RS20870 3a9424d934d2ce8693100ae2e7eb1f8a 166 Pfam PF13310 Virulence protein RhuM family 2 162 4.2E-75 T 22-04-2016 IPR011204 Virulence protein RhuM-like YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 2.3E-261 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 SUPERFAMILY SSF143975 3 420 1.2E-132 T 22-04-2016 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.055 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 SUPERFAMILY SSF52016 421 610 4.0E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 PANTHER PTHR21000:SF11 406 616 0.0 T 22-04-2016 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 Pfam PF00920 Dehydratase family 34 607 1.2E-214 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 PANTHER PTHR21000 406 616 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00845 1fe115cce175ed7e08f0999e82b616c9 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.262 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF54534 283 385 4.51E-33 T 22-04-2016 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF00639 PPIC-type PPIASE domain 178 272 1.2E-19 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF00639 PPIC-type PPIASE domain 289 381 7.0E-26 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:3.10.50.40 167 278 2.2E-31 T 22-04-2016 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:3.10.50.40 281 406 5.0E-37 T 22-04-2016 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF54534 173 277 3.27E-28 T 22-04-2016 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF09312 SurA N-terminal domain 25 142 1.1E-46 T 22-04-2016 IPR015391 SurA N-terminal YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 PANTHER PTHR10657:SF15 1 427 4.4E-176 T 22-04-2016 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 PANTHER PTHR10657 1 427 4.4E-176 T 22-04-2016 YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF109998 25 201 2.55E-44 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPTB_RS03565 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:1.10.3120.10 37 115 2.0E-4 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 PANTHER PTHR11732:SF236 1 283 6.3E-154 T 22-04-2016 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 SUPERFAMILY SSF51430 2 262 7.46E-89 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 8.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 8.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 8.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 8.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 8.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 Pfam PF00248 Aldo/keto reductase family 15 257 3.7E-48 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 PANTHER PTHR11732 1 283 6.3E-154 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS05800 ceb856ea59c1551be7db947514fe0cff 283 Gene3D G3DSA:3.20.20.100 2 263 5.3E-98 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS20230 55bf78bcff0c084ef19b3d5c5a098337 108 Gene3D G3DSA:2.102.10.10 2 107 1.2E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS20230 55bf78bcff0c084ef19b3d5c5a098337 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 6.1E-37 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YPTB_RS20230 55bf78bcff0c084ef19b3d5c5a098337 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 5.5E-41 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YPTB_RS20230 55bf78bcff0c084ef19b3d5c5a098337 108 SUPERFAMILY SSF50022 1 107 2.14E-37 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS20230 55bf78bcff0c084ef19b3d5c5a098337 108 PANTHER PTHR40562 1 108 1.5E-70 T 22-04-2016 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 Gene3D G3DSA:3.90.25.10 205 247 8.2E-53 T 22-04-2016 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 Gene3D G3DSA:3.90.25.10 304 362 8.2E-53 T 22-04-2016 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 PANTHER PTHR10366:SF32 4 282 8.4E-217 T 22-04-2016 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 PANTHER PTHR10366:SF32 310 373 8.4E-217 T 22-04-2016 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 SUPERFAMILY SSF51735 3 352 1.57E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 2.2E-180 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 PANTHER PTHR10366 4 282 8.4E-217 T 22-04-2016 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 PANTHER PTHR10366 310 373 8.4E-217 T 22-04-2016 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.607 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 Gene3D G3DSA:3.40.50.720 5 204 4.5E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05570 f1e5c710dc7902b7dad4a8754e4aa769 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 2.1E-161 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.0E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.288 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 Gene3D G3DSA:2.40.50.100 20 82 9.8E-32 T 22-04-2016 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 SUPERFAMILY SSF110324 2 79 1.88E-34 T 22-04-2016 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 PANTHER PTHR15893 1 85 5.8E-53 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.1E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02665 69554d2aa512d229762d0879d739589d 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 SUPERFAMILY SSF48452 269 388 6.08E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 SUPERFAMILY SSF48452 157 219 6.08E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 1.4E-133 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 Gene3D G3DSA:1.25.40.10 265 390 7.2E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 Gene3D G3DSA:1.25.40.10 82 203 7.2E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 Pfam PF07219 HemY protein N-terminus 26 132 2.3E-32 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 PANTHER PTHR23083:SF396 83 382 3.9E-28 T 22-04-2016 YPTB_RS01105 4a0dcff35820ae82e27602251e9f73b4 406 PANTHER PTHR23083 83 382 3.9E-28 T 22-04-2016 YPTB_RS11195 91ffbb1db21c6b03b93e2eeb5ab0450a 261 Gene3D G3DSA:1.10.3470.10 45 259 1.6E-12 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS11195 91ffbb1db21c6b03b93e2eeb5ab0450a 261 PANTHER PTHR30477:SF0 9 260 5.5E-90 T 22-04-2016 YPTB_RS11195 91ffbb1db21c6b03b93e2eeb5ab0450a 261 SUPERFAMILY SSF81345 3 255 1.05E-41 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS11195 91ffbb1db21c6b03b93e2eeb5ab0450a 261 Pfam PF00950 ABC 3 transport family 2 255 6.7E-84 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YPTB_RS11195 91ffbb1db21c6b03b93e2eeb5ab0450a 261 PANTHER PTHR30477 9 260 5.5E-90 T 22-04-2016 YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.1E-20 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 8.5E-58 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 PANTHER PTHR13767:SF2 3 309 6.9E-137 T 22-04-2016 YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 Gene3D G3DSA:2.30.130.10 250 311 5.2E-29 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 SUPERFAMILY SSF55120 10 248 2.27E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 6.6E-24 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.986 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 5.8E-90 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 SUPERFAMILY SSF88697 251 310 2.14E-14 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS02760 948a5b3e5c784e1f6798eeeaee647990 324 PANTHER PTHR13767 3 309 6.9E-137 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 SMART SM00662 23 234 8.0E-106 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 3.9E-113 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 22-04-2016 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 PANTHER PTHR32108:SF0 1 329 4.3E-160 T 22-04-2016 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 PANTHER PTHR32108 1 329 4.3E-160 T 22-04-2016 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.3E-23 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:2.170.120.12 58 177 1.8E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.661 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF56553 53 178 1.17E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 22-04-2016 YPTB_RS19890 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 22-04-2016 YPTB_RS07260 f001e2a207e31945212ebbf250c49a57 327 SUPERFAMILY SSF52540 6 167 3.15E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07260 f001e2a207e31945212ebbf250c49a57 327 Gene3D G3DSA:3.40.50.300 2 192 2.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07260 f001e2a207e31945212ebbf250c49a57 327 PANTHER PTHR13748 1 325 2.5E-85 T 22-04-2016 YPTB_RS07260 f001e2a207e31945212ebbf250c49a57 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 170 2.4E-39 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPTB_RS07260 f001e2a207e31945212ebbf250c49a57 327 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 240 320 1.7E-5 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPTB_RS07260 f001e2a207e31945212ebbf250c49a57 327 SMART SM00833 239 322 0.0081 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPTB_RS00090 e2c9e5e6d0e3b07fa611924d520dfb19 488 SUPERFAMILY SSF53300 323 465 1.26E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS00090 e2c9e5e6d0e3b07fa611924d520dfb19 488 Hamap MF_01626 Protein ViaA [viaA]. 1 488 60.3 T 22-04-2016 IPR023481 Uncharacterised protein family ViaA YPTB_RS00090 e2c9e5e6d0e3b07fa611924d520dfb19 488 SMART SM00327 324 488 1.4E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS00090 e2c9e5e6d0e3b07fa611924d520dfb19 488 PANTHER PTHR36846 1 488 1.4E-144 T 22-04-2016 YPTB_RS00090 e2c9e5e6d0e3b07fa611924d520dfb19 488 Pfam PF05762 VWA domain containing CoxE-like protein 310 441 1.5E-8 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like YPTB_RS04860 e64a254a6b966395aa54ab55cad5f16d 386 PANTHER PTHR11751 11 386 3.6E-149 T 22-04-2016 YPTB_RS04860 e64a254a6b966395aa54ab55cad5f16d 386 Gene3D G3DSA:3.90.1150.10 273 383 9.6E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS04860 e64a254a6b966395aa54ab55cad5f16d 386 PANTHER PTHR11751:SF301 11 386 3.6E-149 T 22-04-2016 YPTB_RS04860 e64a254a6b966395aa54ab55cad5f16d 386 Pfam PF00155 Aminotransferase class I and II 32 383 9.9E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS04860 e64a254a6b966395aa54ab55cad5f16d 386 SUPERFAMILY SSF53383 9 385 1.26E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS04860 e64a254a6b966395aa54ab55cad5f16d 386 Gene3D G3DSA:3.40.640.10 45 272 1.1E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.9E-21 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 PANTHER PTHR10359 1 212 1.1E-91 T 22-04-2016 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 Gene3D G3DSA:1.10.1670.10 123 208 6.7E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 Gene3D G3DSA:1.10.340.30 23 122 6.6E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 SMART SM00478 38 185 1.4E-54 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.265 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 PIRSF PIRSF001435 1 211 5.0E-52 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.4E-88 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 SMART SM00525 186 206 4.4E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 SUPERFAMILY SSF48150 2 207 8.01E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS11800 7dc742e021525d1baa49877e6b771802 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.9E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 Pfam PF13181 Tetratricopeptide repeat 36 66 1.3E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 Pfam PF13431 Tetratricopeptide repeat 90 122 1.6E-5 T 22-04-2016 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 Gene3D G3DSA:1.25.40.10 36 237 9.3E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 SUPERFAMILY SSF48452 37 200 1.95E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 236 1.6E-81 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 PANTHER PTHR23083 37 247 4.0E-17 T 22-04-2016 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 SMART SM00028 33 66 0.001 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 SMART SM00028 67 100 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS15385 146e35dca96e0e29e0542f8819dcb9ab 249 SMART SM00028 137 170 7.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 Gene3D G3DSA:2.40.50.140 282 339 1.9E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 SUPERFAMILY SSF50331 237 355 2.27E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 Pfam PF08402 TOBE domain 277 348 4.8E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 Gene3D G3DSA:2.40.50.100 342 355 1.7E-4 T 22-04-2016 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 Gene3D G3DSA:2.40.50.100 267 281 1.7E-4 T 22-04-2016 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 SMART SM00382 28 211 7.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 Pfam PF00005 ABC transporter 20 161 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 Gene3D G3DSA:3.40.50.300 4 234 1.4E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 PANTHER PTHR24220:SF151 5 293 4.0E-158 T 22-04-2016 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 PANTHER PTHR24220 5 293 4.0E-158 T 22-04-2016 YPTB_RS13690 ae8ae05e216d98524395b2cb2128e3da 359 SUPERFAMILY SSF52540 4 243 2.18E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 2.1E-24 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 PANTHER PTHR30349:SF5 8 299 4.3E-130 T 22-04-2016 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 299 31.583 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 63.924 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 Gene3D G3DSA:1.10.150.130 7 100 1.7E-29 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 PANTHER PTHR30349 8 299 4.3E-130 T 22-04-2016 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 SUPERFAMILY SSF56349 107 297 2.44E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 Pfam PF00589 Phage integrase family 114 285 7.7E-56 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 Gene3D G3DSA:1.10.443.10 114 290 1.3E-58 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 3.6E-119 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YPTB_RS17160 e23dede0e8320359d4257ade491ec939 299 SUPERFAMILY SSF47823 5 101 1.29E-36 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:1.20.58.100 430 533 3.1E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF56425 250 365 2.84E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 534 1.1E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 1.3E-9 T 22-04-2016 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 23 42 1.3E-9 T 22-04-2016 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF51905 18 267 1.75E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF51905 368 459 1.75E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:3.50.50.60 361 422 1.7E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:3.50.50.60 12 255 1.7E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 21 532 8.0E-224 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 Pfam PF00890 FAD binding domain 22 404 6.6E-101 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 PANTHER PTHR11632:SF27 1 545 3.9E-277 T 22-04-2016 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:3.90.700.10 256 360 1.3E-36 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF46977 437 537 7.06E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS15660 6835bb76b6d4dbe5549725444545d022 545 PANTHER PTHR11632 1 545 3.9E-277 T 22-04-2016 YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 Gene3D G3DSA:3.40.47.10 6 260 1.1E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 PANTHER PTHR11712 1 405 1.0E-169 T 22-04-2016 YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 8.3E-41 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 SMART SM00825 Beta-ketoacyl synthase 4 407 2.1E-12 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 SUPERFAMILY SSF53901 216 405 3.7E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 362 3.2E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 Gene3D G3DSA:3.40.47.10 264 406 1.5E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14240 ae625f21aa3007bab51b5ed208ca193a 407 SUPERFAMILY SSF53901 1 254 2.1E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 SUPERFAMILY SSF56112 18 226 4.87E-21 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 SMART SM00090 5 228 2.5E-15 T 22-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 Gene3D G3DSA:3.30.200.20 17 125 4.5E-12 T 22-04-2016 YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 Pfam PF01163 RIO1 family 31 219 9.4E-44 T 22-04-2016 YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 PANTHER PTHR10593 6 277 2.7E-159 T 22-04-2016 YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 Gene3D G3DSA:1.10.510.10 139 220 3.9E-18 T 22-04-2016 YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 22-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPTB_RS08890 53d0676c93c743ffef02e18ba0dedf10 283 PANTHER PTHR10593:SF19 6 277 2.7E-159 T 22-04-2016 YPTB_RS01995 e65cdfcf7bb3517903ed531e72e8a32e 345 Gene3D G3DSA:3.40.1570.10 5 143 3.2E-7 T 22-04-2016 YPTB_RS01995 e65cdfcf7bb3517903ed531e72e8a32e 345 Gene3D G3DSA:3.40.1570.10 191 340 4.8E-7 T 22-04-2016 YPTB_RS01995 e65cdfcf7bb3517903ed531e72e8a32e 345 SUPERFAMILY SSF144064 4 339 1.28E-132 T 22-04-2016 YPTB_RS01995 e65cdfcf7bb3517903ed531e72e8a32e 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 207 338 3.2E-40 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YPTB_RS01995 e65cdfcf7bb3517903ed531e72e8a32e 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 5.2E-44 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 SUPERFAMILY SSF53774 23 344 1.13E-106 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 5.78E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 PRINTS PR00139 Asparaginase/glutaminase family signature 279 297 5.78E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 5.78E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 20 345 3.1E-148 T 22-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 Pfam PF00710 Asparaginase, N-terminal 25 215 5.6E-61 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 PIRSF PIRSF001220 21 345 2.8E-93 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 PANTHER PTHR11707:SF29 23 342 3.4E-103 T 22-04-2016 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 Gene3D G3DSA:3.40.50.1170 23 221 1.1E-71 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 Gene3D G3DSA:3.40.50.40 232 343 1.5E-39 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 PIRSF PIRSF500176 22 345 6.2E-82 T 22-04-2016 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 SMART SM00870 25 339 1.9E-139 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPTB_RS07790 3ba2e5ac4cc52b72cc04774194e7650e 345 PANTHER PTHR11707 23 342 3.4E-103 T 22-04-2016 YPTB_RS18930 bfd59c2167680878c15f95d719ef7dd5 241 Gene3D G3DSA:1.10.3810.10 61 230 9.5E-61 T 22-04-2016 YPTB_RS18930 bfd59c2167680878c15f95d719ef7dd5 241 PANTHER PTHR30400 1 241 1.5E-124 T 22-04-2016 YPTB_RS18930 bfd59c2167680878c15f95d719ef7dd5 241 PANTHER PTHR30400:SF0 1 241 1.5E-124 T 22-04-2016 YPTB_RS18930 bfd59c2167680878c15f95d719ef7dd5 241 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 7 232 42.389 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 YPTB_RS18930 bfd59c2167680878c15f95d719ef7dd5 241 SUPERFAMILY SSF53955 51 231 2.45E-61 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS18930 bfd59c2167680878c15f95d719ef7dd5 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 19 230 3.1E-83 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 YPTB_RS18930 bfd59c2167680878c15f95d719ef7dd5 241 Pfam PF00912 Transglycosylase 60 227 1.2E-50 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 9.2E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 PANTHER PTHR11544:SF52 1 86 6.8E-56 T 22-04-2016 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 SUPERFAMILY SSF50249 1 66 1.2E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 Gene3D G3DSA:2.40.50.140 1 64 7.6E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 6.2E-41 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 PANTHER PTHR11544 1 86 6.8E-56 T 22-04-2016 YPTB_RS07690 147e3fca95c482f620fabf69995d72dd 87 SMART SM00357 3 67 2.1E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS18755 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 Pfam PF00092 von Willebrand factor type A domain 6 170 6.2E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18755 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 Gene3D G3DSA:3.40.50.410 6 179 1.6E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18755 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 SUPERFAMILY SSF53300 5 179 1.53E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18755 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 SMART SM00327 3 180 5.3E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18755 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 Pfam PF15616 TerY-C metal binding domain 217 346 3.7E-54 T 22-04-2016 IPR028274 TerY-C metal binding domain YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 PANTHER PTHR13932 5 376 3.5E-229 T 22-04-2016 YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 SUPERFAMILY SSF102114 5 376 1.96E-107 T 22-04-2016 YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 PANTHER PTHR13932:SF7 5 376 3.5E-229 T 22-04-2016 YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 Pfam PF04055 Radical SAM superfamily 11 179 1.5E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 SMART SM00729 6 223 3.6E-49 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 1.8E-139 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 Gene3D G3DSA:3.80.30.20 7 238 1.0E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPTB_RS17430 a6d3ae5121b2c3cb2bb2be501962fbae 376 Pfam PF06969 HemN C-terminal domain 306 364 4.7E-8 T 22-04-2016 IPR010723 HemN, C-terminal YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82866 297 499 5.49E-45 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82693 38 131 1.96E-26 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 Gene3D G3DSA:3.30.70.1430 38 137 2.5E-32 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PANTHER PTHR32063:SF27 1 1039 0.0 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82714 717 803 1.7E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82693 803 852 5.23E-25 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82693 564 666 4.19E-27 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82866 826 1021 4.71E-46 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 Gene3D G3DSA:3.30.2090.10 717 800 2.4E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 Gene3D G3DSA:1.20.1640.10 292 503 5.0E-54 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82693 136 182 9.07E-23 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82693 275 331 9.07E-23 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82714 183 273 4.45E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 SUPERFAMILY SSF82693 667 716 5.23E-25 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 Gene3D G3DSA:3.30.70.1430 566 666 1.5E-29 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 Gene3D G3DSA:3.30.2090.10 182 276 8.0E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PANTHER PTHR32063 1 1039 0.0 T 22-04-2016 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS17890 7b3a9d810e72e7d1dec00aa2475e18dd 1039 Gene3D G3DSA:1.10.3850.10 808 1023 1.8E-58 T 22-04-2016 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PANTHER PTHR30009:SF0 473 656 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PANTHER PTHR30009 473 656 0.0 T 22-04-2016 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 7.7E-282 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 4.9E-131 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YPTB_RS14330 2c740773ba6408173d84b5c799ee9047 656 Pfam PF01578 Cytochrome C assembly protein 89 296 1.5E-54 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YPTB_RS07415 afa58f0ebc8cdbbac642fd1e7d90082d 360 Pfam PF01032 FecCD transport family 42 355 1.5E-84 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS07415 afa58f0ebc8cdbbac642fd1e7d90082d 360 PANTHER PTHR30472 6 360 8.8E-191 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS07415 afa58f0ebc8cdbbac642fd1e7d90082d 360 Gene3D G3DSA:1.10.3470.10 24 357 2.1E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS07415 afa58f0ebc8cdbbac642fd1e7d90082d 360 PANTHER PTHR30472:SF25 6 360 8.8E-191 T 22-04-2016 YPTB_RS07415 afa58f0ebc8cdbbac642fd1e7d90082d 360 SUPERFAMILY SSF81345 24 355 2.88E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS16210 26f9e63da11e8cd882d54e87d66eed05 165 PANTHER PTHR35089 2 164 7.1E-71 T 22-04-2016 YPTB_RS16210 26f9e63da11e8cd882d54e87d66eed05 165 Gene3D G3DSA:3.30.910.20 12 165 3.5E-40 T 22-04-2016 YPTB_RS16210 26f9e63da11e8cd882d54e87d66eed05 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 9.0E-38 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YPTB_RS16210 26f9e63da11e8cd882d54e87d66eed05 165 PIRSF PIRSF002094 1 165 5.2E-63 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YPTB_RS16210 26f9e63da11e8cd882d54e87d66eed05 165 PANTHER PTHR35089:SF1 2 164 7.1E-71 T 22-04-2016 YPTB_RS16210 26f9e63da11e8cd882d54e87d66eed05 165 SMART SM00935 12 165 7.4E-57 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YPTB_RS16210 26f9e63da11e8cd882d54e87d66eed05 165 SUPERFAMILY SSF111384 22 164 2.22E-39 T 22-04-2016 IPR024930 Skp domain YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 203 242 4.6E-46 T 22-04-2016 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 20 108 4.6E-46 T 22-04-2016 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 PANTHER PTHR18966 4 243 2.9E-125 T 22-04-2016 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 SMART SM00062 22 241 7.8E-87 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 SUPERFAMILY SSF53850 1 242 4.93E-73 T 22-04-2016 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 SMART SM00079 22 243 9.2E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 1.6E-90 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 110 201 1.0E-28 T 22-04-2016 YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.1E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS07615 ca1104f7499df044cb9471035057c6ab 243 PANTHER PTHR18966:SF194 4 243 2.9E-125 T 22-04-2016 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 SUPERFAMILY SSF69593 246 487 9.29E-25 T 22-04-2016 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 PANTHER PTHR12563 1 117 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 PANTHER PTHR12563 143 812 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 SMART SM00563 299 426 7.4E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 PANTHER PTHR12563:SF14 1 117 0.0 T 22-04-2016 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 PANTHER PTHR12563:SF14 143 812 0.0 T 22-04-2016 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 PIRSF PIRSF500064 2 815 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.578 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 PIRSF PIRSF000437 19 812 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPTB_RS02140 b994a2d0c35c5f519545dd493374f6cd 834 Pfam PF01553 Acyltransferase 281 423 3.6E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.356 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 3.7E-148 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 Gene3D G3DSA:3.90.226.10 18 285 9.0E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 PANTHER PTHR22855 1 303 2.5E-184 T 22-04-2016 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 SUPERFAMILY SSF52096 25 283 4.66E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 Pfam PF01039 Carboxyl transferase domain 95 239 7.8E-18 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 PANTHER PTHR22855:SF17 1 303 2.5E-184 T 22-04-2016 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS14185 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 SMART SM00341 210 289 3.7E-18 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF53098 2 210 4.34E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 PANTHER PTHR12124:SF42 2 369 6.5E-92 T 22-04-2016 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF47819 194 300 4.14E-30 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 SMART SM00474 3 171 1.3E-40 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 Pfam PF00570 HRDC domain 213 279 1.4E-16 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 Pfam PF01612 3'-5' exonuclease 3 168 9.5E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 PANTHER PTHR12124 2 369 6.5E-92 T 22-04-2016 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 3.7E-146 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.681 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF47819 296 371 2.22E-22 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YPTB_RS11280 d31886617773e15a572899dfe0ecc9bb 373 Gene3D G3DSA:3.30.420.10 2 174 6.5E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:3.40.50.300 245 331 2.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:3.40.50.300 3 110 2.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SMART SM01086 335 434 4.5E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SUPERFAMILY SSF52540 3 441 1.1E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SMART SM00382 49 332 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.4E-231 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262 218 443 2.9E-213 T 22-04-2016 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262 1 105 2.9E-213 T 22-04-2016 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.688 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 2.2E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 102 9.4E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:1.10.8.60 335 443 3.1E-36 T 22-04-2016 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262:SF3 218 443 2.9E-213 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262:SF3 1 105 2.9E-213 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.2E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:1.10.8.10 111 177 3.7E-34 T 22-04-2016 YPTB_RS00585 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:1.10.8.10 213 243 3.7E-34 T 22-04-2016 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 SUPERFAMILY SSF51556 50 345 2.3E-19 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 PIRSF PIRSF038971 1 378 2.0E-153 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 Gene3D G3DSA:2.30.40.10 1 91 3.8E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 7.7E-152 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 PANTHER PTHR11271 1 378 2.8E-214 T 22-04-2016 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 Gene3D G3DSA:2.30.40.10 288 360 1.6E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 PANTHER PTHR11271:SF43 1 378 2.8E-214 T 22-04-2016 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 Pfam PF07969 Amidohydrolase family 214 363 1.2E-10 T 22-04-2016 IPR013108 Amidohydrolase 3 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 SUPERFAMILY SSF51338 2 49 7.77E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS02910 05f56e454bc1facfffa9305f84c6b6c9 378 SUPERFAMILY SSF51338 345 377 7.77E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:1.10.287.130 660 728 4.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF47384 660 733 2.55E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:3.30.565.10 734 888 2.8E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 SMART SM00387 776 886 6.1E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423:SF562 23 198 4.4E-132 T 22-04-2016 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423:SF562 599 884 4.4E-132 T 22-04-2016 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 886 3.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF55781 510 658 5.15E-8 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 6.2E-99 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423 23 198 4.4E-132 T 22-04-2016 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423 599 884 4.4E-132 T 22-04-2016 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF52402 254 361 2.09E-6 T 22-04-2016 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:3.40.50.300 22 230 6.0E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 SMART SM00388 665 732 7.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:3.40.50.620 245 360 2.5E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 1.3E-30 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 2.2E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF55874 721 888 7.33E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF13492 GAF domain 530 646 7.4E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 841 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 827 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 864 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15780 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:1.20.120.620 398 503 3.7E-40 T 22-04-2016 YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 SUPERFAMILY SSF101801 55 136 1.28E-26 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 6.6E-24 T 22-04-2016 IPR031576 Flagellar motor switch protein FliN, N-terminal YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 Gene3D G3DSA:2.30.330.10 53 137 6.5E-39 T 22-04-2016 YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 8.9E-26 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 PANTHER PTHR22617 1 136 4.0E-43 T 22-04-2016 YPTB_RS09325 eca084ec01fd9ac7e59214a479e251cb 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 129 2.5E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 SUPERFAMILY SSF55781 77 259 4.58E-52 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 SUPERFAMILY SSF46785 13 86 8.84E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.2E-40 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 PANTHER PTHR30136:SF7 1 263 4.3E-133 T 22-04-2016 YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 4.4E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 Gene3D G3DSA:1.10.10.10 12 85 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 PANTHER PTHR30136 1 263 4.3E-133 T 22-04-2016 YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 SMART SM00346 13 102 1.4E-36 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YPTB_RS12885 101e25b2ae6abc1602de23a4f17b2def 263 Gene3D G3DSA:3.30.450.40 86 261 9.1E-66 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-65 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 SUPERFAMILY SSF50692 1 115 2.86E-46 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 PANTHER PTHR21012 2 126 7.7E-68 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.5E-47 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 Gene3D G3DSA:2.40.40.20 1 124 3.1E-54 T 22-04-2016 YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 4.8E-60 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 69.86 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 PANTHER PTHR21012:SF0 2 126 7.7E-68 T 22-04-2016 YPTB_RS04065 7806a45f612c60697b27ed7cc6678492 126 PIRSF PIRSF006246 1 125 9.5E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 Gene3D G3DSA:1.10.10.10 156 209 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 SUPERFAMILY SSF52172 2 131 3.98E-30 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 PANTHER PTHR26402 3 201 1.1E-79 T 22-04-2016 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 Gene3D G3DSA:3.40.50.2300 3 155 3.7E-32 T 22-04-2016 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 3.8E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 SUPERFAMILY SSF46894 141 210 1.36E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 SMART SM00421 147 204 7.7E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 SMART SM00448 3 116 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS10560 9d0d4ba5fd6b102f32603f191face3f8 210 PANTHER PTHR26402:SF405 3 201 1.1E-79 T 22-04-2016 YPTB_RS01865 e07b4620325426d498162cdc13c644b9 404 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 397 9.7E-17 T 22-04-2016 IPR032034 Yop protein translocation protein D, periplasmic domain YPTB_RS01865 e07b4620325426d498162cdc13c644b9 404 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 5 402 2.0E-121 T 22-04-2016 IPR012843 Type III secretion system YscD/HrpQ YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 PANTHER PTHR11451 1 263 4.7E-126 T 22-04-2016 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 32 316 41.061 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 34 259 1.6E-44 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 PRINTS PR00987 Glutamyl-tRNA synthetase signature 49 60 1.7E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 PRINTS PR00987 Glutamyl-tRNA synthetase signature 64 77 1.7E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 47 1.7E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 220 1.7E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 206 1.7E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 PANTHER PTHR11451:SF35 1 263 4.7E-126 T 22-04-2016 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 Gene3D G3DSA:3.90.800.10 98 196 2.1E-15 T 22-04-2016 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 SUPERFAMILY SSF52374 32 308 1.35E-85 T 22-04-2016 YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 Gene3D G3DSA:3.40.50.620 32 97 4.3E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 Gene3D G3DSA:3.40.50.620 198 246 4.3E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS04090 04d6dd457e12ec8a5534c71af3181899 331 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 32 289 7.5E-112 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Gene3D G3DSA:2.20.25.90 1 54 3.3E-20 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 SUPERFAMILY SSF53706 1 561 7.59E-196 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 PANTHER PTHR11615 1 704 3.3E-262 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 8.5E-28 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 2.1E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 684 9.5E-270 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 PANTHER PTHR11615:SF112 1 704 3.3E-262 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Gene3D G3DSA:1.20.5.460 688 713 1.6E-5 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Pfam PF00384 Molybdopterin oxidoreductase 61 486 3.0E-93 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 SMART SM00926 1 54 2.4E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Gene3D G3DSA:2.40.40.20 525 685 2.4E-50 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 SUPERFAMILY SSF50692 564 700 3.39E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Gene3D G3DSA:3.40.228.10 144 373 1.9E-78 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Gene3D G3DSA:3.40.50.740 384 491 1.7E-48 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 Gene3D G3DSA:3.40.50.740 62 143 1.7E-48 T 22-04-2016 YPTB_RS02295 0055ca3421025a90026701227cdc91f7 715 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 433 450 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPTB_RS01075 38fb0b8983af7dd4a30fcde19438a816 246 PANTHER PTHR34136 2 246 2.6E-106 T 22-04-2016 YPTB_RS01075 38fb0b8983af7dd4a30fcde19438a816 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 2.9E-53 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YPTB_RS01075 38fb0b8983af7dd4a30fcde19438a816 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 58.617 T 22-04-2016 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YPTB_RS01075 38fb0b8983af7dd4a30fcde19438a816 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 1.5E-74 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YPTB_RS01075 38fb0b8983af7dd4a30fcde19438a816 246 PANTHER PTHR34136:SF1 2 246 2.6E-106 T 22-04-2016 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 PIRSF PIRSF006769 1 368 3.0E-127 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 Gene3D G3DSA:3.40.140.10 4 130 2.0E-33 T 22-04-2016 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 Gene3D G3DSA:3.40.430.10 131 363 1.6E-68 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 1.2E-70 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 SUPERFAMILY SSF53927 4 146 2.3E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 PANTHER PTHR11079:SF10 1 215 8.2E-70 T 22-04-2016 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 SUPERFAMILY SSF53597 145 363 8.83E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 Pfam PF01872 RibD C-terminal domain 148 360 1.6E-57 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 2.3E-141 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.5E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 PANTHER PTHR11079 1 215 8.2E-70 T 22-04-2016 YPTB_RS05190 7c90c704fe1e6282b6ae3cba310918a2 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 PANTHER PTHR30451:SF1 510 867 0.0 T 22-04-2016 YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 PANTHER PTHR30451:SF1 8 493 0.0 T 22-04-2016 YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 Pfam PF13954 PapC N-terminal domain 46 189 2.0E-37 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 317 327 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 Pfam PF00577 Outer membrane usher protein 206 775 4.3E-167 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 PANTHER PTHR30451 510 867 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 PANTHER PTHR30451 8 493 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 Pfam PF13953 PapC C-terminal domain 786 849 5.7E-18 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS12910 7cae1b7110259b040c1edf0d3a493831 870 SUPERFAMILY SSF141729 63 181 4.84E-30 T 22-04-2016 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF55874 336 505 7.2E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.30.450.20 143 267 2.3E-21 T 22-04-2016 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423 4 95 0.0 T 22-04-2016 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423 153 677 0.0 T 22-04-2016 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423:SF476 4 95 0.0 T 22-04-2016 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423:SF476 153 677 0.0 T 22-04-2016 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF01627 Hpt domain 686 769 8.3E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF47384 269 347 9.42E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.10.287.130 274 332 3.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00388 282 347 5.6E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00073 675 772 1.0E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.20.120.160 676 775 6.2E-36 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 8.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.0E-15 T 22-04-2016 IPR000014 PAS domain YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 PIRSF PIRSF003182 1 778 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF52172 525 648 3.42E-30 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF55785 143 267 1.92E-21 T 22-04-2016 IPR000014 PAS domain YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.40.50.2300 525 652 4.8E-33 T 22-04-2016 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF47226 661 773 7.98E-31 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00989 PAS fold 157 266 2.5E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 1.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00448 525 638 3.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00387 394 507 3.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00072 Response regulator receiver domain 527 638 8.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00091 155 221 4.9E-8 T 22-04-2016 IPR000014 PAS domain YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.30.565.10 333 506 2.2E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18945 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.10.287.970 1 89 2.0E-39 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain YPTB_RS03980 1404cf4057720d6986c5c267a7f5f7e7 465 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS03980 1404cf4057720d6986c5c267a7f5f7e7 465 PANTHER PTHR11785:SF26 1 456 0.0 T 22-04-2016 YPTB_RS03980 1404cf4057720d6986c5c267a7f5f7e7 465 Pfam PF00324 Amino acid permease 18 449 1.4E-118 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS03980 1404cf4057720d6986c5c267a7f5f7e7 465 PIRSF PIRSF006060 1 462 7.5E-75 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS03980 1404cf4057720d6986c5c267a7f5f7e7 465 PANTHER PTHR11785 1 456 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS03560 de3cd34acf8dda014ffd851e6c33367b 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 2.4E-107 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YPTB_RS03560 de3cd34acf8dda014ffd851e6c33367b 331 PANTHER PTHR30004:SF5 2 331 2.9E-233 T 22-04-2016 YPTB_RS03560 de3cd34acf8dda014ffd851e6c33367b 331 SUPERFAMILY SSF53659 7 328 1.12E-112 T 22-04-2016 YPTB_RS03560 de3cd34acf8dda014ffd851e6c33367b 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 325 4.6E-129 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YPTB_RS03560 de3cd34acf8dda014ffd851e6c33367b 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 326 35.701 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YPTB_RS03560 de3cd34acf8dda014ffd851e6c33367b 331 PANTHER PTHR30004 2 331 2.9E-233 T 22-04-2016 YPTB_RS03560 de3cd34acf8dda014ffd851e6c33367b 331 Gene3D G3DSA:3.40.718.10 2 329 4.7E-135 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 PANTHER PTHR11441 1 193 4.4E-85 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 Pfam PF00265 Thymidine kinase 2 186 6.3E-62 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 SUPERFAMILY SSF57716 142 191 1.28E-17 T 22-04-2016 YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 36.002 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 SUPERFAMILY SSF52540 1 141 5.03E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 PIRSF PIRSF035805 1 194 1.8E-57 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPTB_RS11510 a28376b238c84186360a863fc02a5b88 196 Gene3D G3DSA:3.30.60.20 142 191 7.9E-21 T 22-04-2016 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 PANTHER PTHR33799:SF3 3 324 1.9E-232 T 22-04-2016 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 Pfam PF03610 PTS system fructose IIA component 5 116 3.6E-33 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 Gene3D G3DSA:3.40.50.510 3 130 4.2E-47 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 SUPERFAMILY SSF53062 3 128 5.1E-37 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 Gene3D G3DSA:3.40.35.10 163 323 7.2E-69 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 165 311 5.3E-58 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 Pfam PF03830 PTS system sorbose subfamily IIB component 165 311 7.7E-57 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 PANTHER PTHR33799 3 324 1.9E-232 T 22-04-2016 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 SUPERFAMILY SSF52728 163 322 1.28E-56 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPTB_RS09010 04f6721d7605175e690e3de309b270d5 324 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 5.2E-45 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SMART SM00955 260 588 8.3E-183 T 22-04-2016 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.155 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 PANTHER PTHR23355:SF9 1 815 0.0 T 22-04-2016 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 138 236 3.62E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 Pfam PF00575 S1 RNA binding domain 642 724 1.2E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 Pfam PF00773 RNB domain 260 587 1.2E-105 T 22-04-2016 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 4.7E-276 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 222 642 4.63E-141 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 67 145 3.82E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 Pfam PF08206 Ribonuclease B OB domain 87 144 3.7E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 3.5E-270 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 Gene3D G3DSA:2.40.50.140 645 735 3.9E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SMART SM00316 643 726 3.4E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SMART SM00316 80 142 12.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SMART SM00357 86 145 2.7E-16 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 645 725 8.01E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.1E-16 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain YPTB_RS02495 649f3d373f1715be0e78e8b04c568889 844 PANTHER PTHR23355 1 815 0.0 T 22-04-2016 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.2E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 SMART SM00420 6 58 1.3E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 Gene3D G3DSA:3.40.50.1360 76 222 3.7E-8 T 22-04-2016 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 SUPERFAMILY SSF100950 74 233 8.89E-26 T 22-04-2016 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 PANTHER PTHR30363 1 255 1.4E-170 T 22-04-2016 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 Gene3D G3DSA:1.10.10.10 5 57 2.4E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 SUPERFAMILY SSF46785 5 65 7.76E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.8E-49 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 PANTHER PTHR30363:SF5 1 255 1.4E-170 T 22-04-2016 YPTB_RS10625 0fb781fe57d46b8be78aabd3c85a45fb 256 SMART SM01134 73 233 5.7E-64 T 22-04-2016 YPTB_RS00240 4d98f618e344e6e2f6fed8265cd6dc3e 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 2.3E-51 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPTB_RS00240 4d98f618e344e6e2f6fed8265cd6dc3e 145 SUPERFAMILY SSF69500 1 144 6.54E-56 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain YPTB_RS00240 4d98f618e344e6e2f6fed8265cd6dc3e 145 Gene3D G3DSA:3.50.80.10 1 144 2.9E-56 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain YPTB_RS00240 4d98f618e344e6e2f6fed8265cd6dc3e 145 PANTHER PTHR10472 2 144 4.6E-76 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPTB_RS00240 4d98f618e344e6e2f6fed8265cd6dc3e 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.6E-68 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPTB_RS00240 4d98f618e344e6e2f6fed8265cd6dc3e 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.707 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 SUPERFAMILY SSF53720 7 482 9.42E-171 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.9E-225 T 22-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 1.6E-177 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 Gene3D G3DSA:3.40.309.10 266 444 1.9E-68 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 Gene3D G3DSA:3.40.605.10 8 265 1.1E-102 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 PANTHER PTHR11699 1 483 0.0 T 22-04-2016 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 PANTHER PTHR11699:SF115 1 483 0.0 T 22-04-2016 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.321 T 22-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPTB_RS06630 0878c81e53ae87cfdb692b5a9976067d 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS01275 cbb51e6ed47c8b52c98d722bdd184353 222 PANTHER PTHR34300 1 222 3.4E-131 T 22-04-2016 YPTB_RS01275 cbb51e6ed47c8b52c98d722bdd184353 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 9.0E-34 T 22-04-2016 IPR003744 Protein of unknown function DUF165 YPTB_RS01275 cbb51e6ed47c8b52c98d722bdd184353 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 2.6E-62 T 22-04-2016 IPR003744 Protein of unknown function DUF165 YPTB_RS01275 cbb51e6ed47c8b52c98d722bdd184353 222 PANTHER PTHR34300:SF1 1 222 3.4E-131 T 22-04-2016 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 Gene3D G3DSA:1.20.1250.20 5 184 6.5E-31 T 22-04-2016 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 129 151 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 44 63 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 302 322 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 PANTHER PTHR23502 4 380 1.8E-124 T 22-04-2016 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 Pfam PF07690 Major Facilitator Superfamily 10 351 8.7E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 Gene3D G3DSA:1.20.1250.20 196 388 8.6E-14 T 22-04-2016 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 PANTHER PTHR23502:SF19 4 380 1.8E-124 T 22-04-2016 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 374 3.8E-74 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 SUPERFAMILY SSF103473 4 384 1.44E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS11365 4ba0ec75140ac80afc8c3337335959db 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 Pfam PF01026 TatD related DNase 2 257 1.7E-64 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 SUPERFAMILY SSF51556 1 259 8.38E-80 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 Gene3D G3DSA:3.20.20.140 1 259 6.4E-82 T 22-04-2016 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 PIRSF PIRSF005902 1 260 1.4E-71 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 PANTHER PTHR10060:SF13 1 260 4.9E-132 T 22-04-2016 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 Hamap MF_00901 Tat-linked quality control protein TatD [tatD]. 1 260 63.041 T 22-04-2016 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 PANTHER PTHR10060 1 260 4.9E-132 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS01520 6c81aa8c8c3cf229116a99fd97ccf6b5 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 Gene3D G3DSA:3.40.50.450 3 216 1.5E-75 T 22-04-2016 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PANTHER PTHR13697 3 299 9.4E-131 T 22-04-2016 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PIRSF PIRSF000532 1 327 9.3E-124 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 SUPERFAMILY SSF53784 3 315 1.83E-108 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 302 2.8E-120 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 327 44.763 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 Pfam PF00365 Phosphofructokinase 4 277 1.0E-106 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00470 4fed272958771beac5a282d12c628f05 327 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PANTHER PTHR11444 3 456 2.1E-239 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PANTHER PTHR11444:SF3 3 456 2.1E-239 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 Gene3D G3DSA:1.10.40.30 375 432 3.6E-29 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 Gene3D G3DSA:1.10.275.10 1 107 1.4E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 Gene3D G3DSA:1.20.200.10 108 374 1.9E-103 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 SUPERFAMILY SSF48557 3 456 6.6E-141 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.2E-67 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.2E-67 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.2E-67 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.2E-67 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.2E-67 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.2E-67 T 22-04-2016 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.97 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.3E-209 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 Pfam PF00206 Lyase 6 301 1.4E-95 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPTB_RS00675 1485eaf226c57c493911797c88ae76a7 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.2E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 PANTHER PTHR30126:SF22 6 297 9.6E-217 T 22-04-2016 YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 Gene3D G3DSA:3.40.190.10 182 264 9.2E-10 T 22-04-2016 YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 SUPERFAMILY SSF53850 93 282 8.93E-23 T 22-04-2016 YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 Gene3D G3DSA:1.10.10.10 7 92 3.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 Pfam PF03466 LysR substrate binding domain 120 279 4.2E-18 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 SUPERFAMILY SSF46785 8 91 1.69E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 Gene3D G3DSA:3.40.190.10 125 181 2.0E-4 T 22-04-2016 YPTB_RS18895 0dda5ab6deb47bb4d31a06720cd4a1ab 297 PANTHER PTHR30126 6 297 9.6E-217 T 22-04-2016 YPTB_RS04915 da14512ba6efc01adf70c8e7b9361a64 193 Pfam PF13580 SIS domain 15 146 1.6E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS04915 da14512ba6efc01adf70c8e7b9361a64 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.9E-84 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 YPTB_RS04915 da14512ba6efc01adf70c8e7b9361a64 193 Gene3D G3DSA:3.40.50.10490 1 190 1.1E-63 T 22-04-2016 YPTB_RS04915 da14512ba6efc01adf70c8e7b9361a64 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.677 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 YPTB_RS04915 da14512ba6efc01adf70c8e7b9361a64 193 PANTHER PTHR30390 2 192 1.0E-96 T 22-04-2016 YPTB_RS04915 da14512ba6efc01adf70c8e7b9361a64 193 PANTHER PTHR30390:SF6 2 192 1.0E-96 T 22-04-2016 YPTB_RS04915 da14512ba6efc01adf70c8e7b9361a64 193 SUPERFAMILY SSF53697 1 189 2.43E-52 T 22-04-2016 YPTB_RS06705 68ac2190cd1570ab3def7b2cab6aebee 391 PANTHER PTHR30294 18 391 9.3E-237 T 22-04-2016 YPTB_RS06705 68ac2190cd1570ab3def7b2cab6aebee 391 PANTHER PTHR30294:SF17 18 391 9.3E-237 T 22-04-2016 YPTB_RS06705 68ac2190cd1570ab3def7b2cab6aebee 391 Pfam PF12698 ABC-2 family transporter protein 44 383 1.1E-42 T 22-04-2016 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 SUPERFAMILY SSF52172 1 125 6.97E-28 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 6.2E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 SMART SM00421 143 200 1.8E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 Pfam PF00072 Response regulator receiver domain 4 115 1.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 Gene3D G3DSA:1.10.10.10 145 205 5.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 SUPERFAMILY SSF46894 130 206 4.08E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 Gene3D G3DSA:3.40.50.2300 1 144 2.5E-30 T 22-04-2016 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 SMART SM00448 2 115 4.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 PANTHER PTHR26402:SF612 2 202 1.3E-156 T 22-04-2016 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 3.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 3.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 3.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS08825 2170942f84359f8a1cae061c5e24ee8f 209 PANTHER PTHR26402 2 202 1.3E-156 T 22-04-2016 YPTB_RS11015 4ae31d38718d86c248e587c26d7807e8 284 Gene3D G3DSA:3.20.20.70 18 281 3.7E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11015 4ae31d38718d86c248e587c26d7807e8 284 PANTHER PTHR21057:SF6 1 284 1.8E-231 T 22-04-2016 YPTB_RS11015 4ae31d38718d86c248e587c26d7807e8 284 Pfam PF00793 DAHP synthetase I family 10 275 7.6E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS11015 4ae31d38718d86c248e587c26d7807e8 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.4E-118 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS11015 4ae31d38718d86c248e587c26d7807e8 284 PANTHER PTHR21057 1 284 1.8E-231 T 22-04-2016 YPTB_RS11015 4ae31d38718d86c248e587c26d7807e8 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.167 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS11015 4ae31d38718d86c248e587c26d7807e8 284 SUPERFAMILY SSF51569 3 279 6.32E-103 T 22-04-2016 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 1.5E-39 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 3.9E-47 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 Gene3D G3DSA:3.30.70.1450 228 283 3.9E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 PANTHER PTHR30445 3 558 0.0 T 22-04-2016 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 59.381 T 22-04-2016 IPR023017 Transport protein YbjL, putative YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 Pfam PF06826 Predicted Permease Membrane Region 17 182 7.8E-39 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 Pfam PF06826 Predicted Permease Membrane Region 386 554 8.1E-42 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 PANTHER PTHR30445:SF4 3 558 0.0 T 22-04-2016 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 Gene3D G3DSA:3.30.70.1450 303 374 6.6E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 SUPERFAMILY SSF116726 291 374 5.23E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 Pfam PF02080 TrkA-C domain 305 372 1.4E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 Pfam PF02080 TrkA-C domain 227 278 5.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS07500 87af8d1c8680733b7646e0e25d051946 562 SUPERFAMILY SSF116726 227 282 1.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS05675 601cd673405fd2c06a9527478ae821ab 228 SMART SM00382 35 223 1.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05675 601cd673405fd2c06a9527478ae821ab 228 PANTHER PTHR24220 8 227 9.5E-116 T 22-04-2016 YPTB_RS05675 601cd673405fd2c06a9527478ae821ab 228 Gene3D G3DSA:3.40.50.300 5 227 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05675 601cd673405fd2c06a9527478ae821ab 228 SUPERFAMILY SSF52540 6 227 5.82E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05675 601cd673405fd2c06a9527478ae821ab 228 Pfam PF00005 ABC transporter 27 174 6.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS05675 601cd673405fd2c06a9527478ae821ab 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS05675 601cd673405fd2c06a9527478ae821ab 228 PANTHER PTHR24220:SF509 8 227 9.5E-116 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SMART SM00387 600 718 2.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PANTHER PTHR24423 376 851 7.1E-191 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PANTHER PTHR24423 35 60 7.1E-191 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PANTHER PTHR24423:SF544 376 851 7.1E-191 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PANTHER PTHR24423:SF544 35 60 7.1E-191 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Pfam PF12860 PAS fold 386 486 1.7E-9 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Gene3D G3DSA:3.40.50.2300 736 851 3.5E-23 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Pfam PF00672 HAMP domain 297 362 6.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SMART SM00304 315 368 5.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SMART SM00388 497 559 1.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SUPERFAMILY SSF55785 367 471 3.24E-7 T 22-04-2016 IPR000014 PAS domain YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 716 3.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SMART SM00448 738 848 1.7E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SUPERFAMILY SSF158472 321 363 1.44E-7 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SUPERFAMILY SSF52172 739 851 9.68E-20 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SUPERFAMILY SSF55874 550 718 4.06E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 675 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 715 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 661 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 696 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Pfam PF00072 Response regulator receiver domain 740 848 6.6E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Gene3D G3DSA:3.30.450.20 370 482 7.4E-10 T 22-04-2016 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Gene3D G3DSA:3.30.565.10 563 716 7.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 Pfam PF00512 His Kinase A (phospho-acceptor) domain 498 558 6.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS20595 c70c8efc77f66c527137ee6e8539b84a 851 SUPERFAMILY SSF47384 492 557 2.55E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 Gene3D G3DSA:1.10.10.10 5 83 5.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 Gene3D G3DSA:3.40.190.10 180 265 6.8E-5 T 22-04-2016 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 SUPERFAMILY SSF46785 5 89 1.57E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 PANTHER PTHR30537 1 294 3.4E-190 T 22-04-2016 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 SUPERFAMILY SSF53850 92 294 1.99E-39 T 22-04-2016 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 PANTHER PTHR30537:SF1 1 294 3.4E-190 T 22-04-2016 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.0E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 Pfam PF03466 LysR substrate binding domain 91 294 2.2E-37 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS05790 7f49fa5b02bf6afbba09b099d3d01466 297 Gene3D G3DSA:3.40.190.10 94 179 6.0E-18 T 22-04-2016 YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 PANTHER PTHR30329:SF4 307 531 9.2E-122 T 22-04-2016 YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 PANTHER PTHR30329:SF4 200 276 9.2E-122 T 22-04-2016 YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 Pfam PF00691 OmpA family 398 501 8.3E-11 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 Pfam PF09850 Type VI secretion system protein DotU 145 336 9.1E-42 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 SUPERFAMILY SSF103088 385 507 1.01E-20 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 PANTHER PTHR30329 307 531 9.2E-122 T 22-04-2016 YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 PANTHER PTHR30329 200 276 9.2E-122 T 22-04-2016 YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 142 343 1.7E-49 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS03665 585964d1afa53580a15af9f914a1b3a6 536 Gene3D G3DSA:3.30.1330.60 377 506 2.0E-24 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 260 3.6E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 SUPERFAMILY SSF52540 279 525 3.17E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 PANTHER PTHR24220 8 411 3.0E-202 T 22-04-2016 YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 PANTHER PTHR24220:SF574 8 411 3.0E-202 T 22-04-2016 YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 Gene3D G3DSA:3.40.50.300 275 527 5.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 Gene3D G3DSA:3.40.50.300 5 259 6.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 SMART SM00382 312 502 3.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 SMART SM00382 35 235 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 SUPERFAMILY SSF52540 6 257 1.28E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 Pfam PF00005 ABC transporter 303 454 3.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07225 2a04f9d482e4853ce854cb60369399b7 530 Pfam PF00005 ABC transporter 27 185 2.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 PANTHER PTHR35892:SF2 1 179 1.7E-62 T 22-04-2016 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 51 59 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 171 179 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 Pfam PF13505 Outer membrane protein beta-barrel domain 11 179 1.3E-33 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 PANTHER PTHR35892 1 179 1.7E-62 T 22-04-2016 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 140 161 2.9E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 93 116 2.9E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 50 62 2.9E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 167 178 2.9E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 SUPERFAMILY SSF56925 29 179 7.06E-33 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS15505 8ad15fb36d3e5d5e101172f9997f5b74 179 Gene3D G3DSA:2.40.160.20 27 179 1.9E-42 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 PANTHER PTHR11205 1 156 1.0E-96 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.4E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 Gene3D G3DSA:1.10.455.10 8 156 2.4E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 PIRSF PIRSF002122 3 156 1.9E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 SUPERFAMILY SSF47973 6 149 7.59E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.144 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YPTB_RS20045 8fe87bc8d61e31dd523adc4cb6199cb6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.5E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YPTB_RS19020 c657bb0a3af6952bcdc5da8b910bd65b 420 Gene3D G3DSA:3.65.10.10 221 417 2.6E-63 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPTB_RS19020 c657bb0a3af6952bcdc5da8b910bd65b 420 Gene3D G3DSA:3.65.10.10 21 220 2.7E-71 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPTB_RS19020 c657bb0a3af6952bcdc5da8b910bd65b 420 SUPERFAMILY SSF55205 1 419 2.62E-147 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YPTB_RS19020 c657bb0a3af6952bcdc5da8b910bd65b 420 PANTHER PTHR21090 1 420 3.7E-229 T 22-04-2016 YPTB_RS19020 c657bb0a3af6952bcdc5da8b910bd65b 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 47.015 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS19020 c657bb0a3af6952bcdc5da8b910bd65b 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.4E-186 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS19020 c657bb0a3af6952bcdc5da8b910bd65b 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 407 6.2E-127 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 21 335 7.3E-162 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 337 52.83 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 Pfam PF01207 Dihydrouridine synthase (Dus) 24 323 2.0E-95 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 PIRSF PIRSF006621 10 332 9.3E-72 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 PANTHER PTHR11082:SF29 13 343 4.4E-164 T 22-04-2016 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 SUPERFAMILY SSF51395 21 333 9.77E-72 T 22-04-2016 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 PANTHER PTHR11082 13 343 4.4E-164 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 Gene3D G3DSA:3.20.20.70 21 261 2.1E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS02160 b2eb14d1f96e2b3de7f3cb83213fa06d 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS08200 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Gene3D G3DSA:2.30.110.20 1 160 8.2E-33 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS08200 9e361dca00c5ea66c6b5fec0e8ad25ca 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS08200 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319:SF2 1 163 7.3E-144 T 22-04-2016 YPTB_RS08200 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319 1 163 7.3E-144 T 22-04-2016 YPTB_RS08200 9e361dca00c5ea66c6b5fec0e8ad25ca 163 SUPERFAMILY SSF141452 2 160 3.92E-43 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS08200 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.8E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS17585 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Gene3D G3DSA:2.30.110.20 1 160 8.2E-33 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS17585 9e361dca00c5ea66c6b5fec0e8ad25ca 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS17585 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319:SF2 1 163 7.3E-144 T 22-04-2016 YPTB_RS17585 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319 1 163 7.3E-144 T 22-04-2016 YPTB_RS17585 9e361dca00c5ea66c6b5fec0e8ad25ca 163 SUPERFAMILY SSF141452 2 160 3.92E-43 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS17585 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.8E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Pfam PF13538 UvrD-like helicase C-terminal domain 575 621 2.4E-15 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 PANTHER PTHR10887 171 344 6.3E-96 T 22-04-2016 YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 7 646 6.3E-186 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 SUPERFAMILY SSF52540 386 417 4.07E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 SUPERFAMILY SSF52540 473 646 4.07E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 SUPERFAMILY SSF52540 300 340 4.07E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 646 54.25 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Gene3D G3DSA:3.40.50.300 457 503 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Gene3D G3DSA:3.40.50.300 393 419 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Gene3D G3DSA:3.40.50.300 316 329 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Gene3D G3DSA:3.40.50.300 563 634 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 PANTHER PTHR10887:SF351 171 344 6.3E-96 T 22-04-2016 YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Gene3D G3DSA:3.40.50.300 172 315 3.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 SUPERFAMILY SSF52540 6 399 2.43E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16380 cb14f178e26719608d3974e43068b1d1 652 Pfam PF13604 AAA domain 175 337 4.2E-32 T 22-04-2016 YPTB_RS14610 b65f67732a14ab66e534f02ce3b6869d 411 Gene3D G3DSA:3.90.1150.10 264 395 4.3E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS14610 b65f67732a14ab66e534f02ce3b6869d 411 PANTHER PTHR11751 18 398 1.7E-269 T 22-04-2016 YPTB_RS14610 b65f67732a14ab66e534f02ce3b6869d 411 Pfam PF00155 Aminotransferase class I and II 37 387 5.8E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS14610 b65f67732a14ab66e534f02ce3b6869d 411 PANTHER PTHR11751:SF302 18 398 1.7E-269 T 22-04-2016 YPTB_RS14610 b65f67732a14ab66e534f02ce3b6869d 411 Gene3D G3DSA:3.40.640.10 50 263 6.3E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS14610 b65f67732a14ab66e534f02ce3b6869d 411 SUPERFAMILY SSF53383 10 394 2.18E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS15550 21f9de117691def151525fc2377bb129 478 Pfam PF00672 HAMP domain 179 246 3.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 SUPERFAMILY SSF47384 235 316 4.32E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 PANTHER PTHR24423 192 478 4.9E-235 T 22-04-2016 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 PANTHER PTHR24423 1 14 4.9E-235 T 22-04-2016 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 6.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 6.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 6.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 Gene3D G3DSA:1.10.287.130 244 316 1.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 Gene3D G3DSA:3.30.565.10 324 476 1.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15550 21f9de117691def151525fc2377bb129 478 SMART SM00388 252 320 2.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 SUPERFAMILY SSF55874 324 473 4.58E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15550 21f9de117691def151525fc2377bb129 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 2.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 474 1.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15550 21f9de117691def151525fc2377bb129 478 PANTHER PTHR24423:SF473 192 478 4.9E-235 T 22-04-2016 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 PANTHER PTHR24423:SF473 1 14 4.9E-235 T 22-04-2016 YPTB_RS15550 21f9de117691def151525fc2377bb129 478 SMART SM00387 363 475 4.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PANTHER PTHR11817 1 479 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF50800 74 168 3.31E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:2.40.33.10 77 170 5.6E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.40.1380.20 332 479 1.8E-37 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PANTHER PTHR11817:SF17 1 479 0.0 T 22-04-2016 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.20.20.60 172 331 1.9E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.20.20.60 6 76 1.9E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 6.1E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 5.5E-131 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.7E-169 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF51621 171 344 1.61E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF51621 4 79 1.61E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS11220 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF52935 329 479 3.14E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 Gene3D G3DSA:1.10.1040.10 175 290 1.5E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 PANTHER PTHR21708:SF24 1 294 2.7E-86 T 22-04-2016 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 290 4.4E-84 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 SUPERFAMILY SSF48179 168 289 2.14E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.5E-23 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 PANTHER PTHR21708 1 294 2.7E-86 T 22-04-2016 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 3.5E-35 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 Gene3D G3DSA:3.40.50.720 1 174 6.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05245 6388ce34e6b92dc843fc591adc4199a2 303 SUPERFAMILY SSF51735 1 167 7.99E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 SUPERFAMILY SSF101967 685 775 1.83E-18 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 PANTHER PTHR35843:SF2 448 543 3.7E-54 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 PANTHER PTHR35843:SF2 112 416 3.7E-54 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 PANTHER PTHR35843:SF2 704 880 3.7E-54 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 SUPERFAMILY SSF101967 200 344 1.7E-22 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:1.20.5.170 491 533 3.5E-5 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:1.20.5.170 332 372 4.1E-4 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 SUPERFAMILY SSF101967 364 503 1.44E-23 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 PANTHER PTHR35843 448 543 3.7E-54 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 PANTHER PTHR35843 112 416 3.7E-54 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 PANTHER PTHR35843 704 880 3.7E-54 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 SUPERFAMILY SSF101967 527 664 5.62E-18 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 SUPERFAMILY SSF54523 765 880 3.3E-25 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:3.30.1300.30 771 880 4.8E-31 T 22-04-2016 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:2.150.10.10 116 185 1.1E-4 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:2.150.10.10 694 770 3.8E-21 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:2.150.10.10 389 490 3.8E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:2.150.10.10 204 331 5.2E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Gene3D G3DSA:2.150.10.10 549 664 6.1E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 321 341 3.1E-7 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 480 500 8.5E-9 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 641 661 3.7E-6 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 392 418 9.8E-7 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 551 576 6.3E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 579 605 8.8E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 724 748 1.6E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 Pfam PF03895 YadA-like C-terminal region 804 880 1.2E-21 T 22-04-2016 IPR005594 YadA-like, C-terminal YPTB_RS13025 7323880b57c090b9a87d8bb457148afc 880 SUPERFAMILY SSF101967 111 185 1.7E-5 T 22-04-2016 YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 SUPERFAMILY SSF52540 4 642 3.38E-181 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 PANTHER PTHR11070:SF7 4 718 1.3E-256 T 22-04-2016 YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 286 387 3.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 552 642 3.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:1.10.10.160 114 190 3.9E-25 T 22-04-2016 IPR013986 DExx box DNA helicase domain YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 191 285 2.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 4 110 2.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 PANTHER PTHR11070 4 718 1.3E-256 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 2.1E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.3E-73 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPTB_RS01175 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:1.10.486.10 388 541 5.9E-50 T 22-04-2016 YPTB_RS05715 2878b653f957cd700013190623ede902 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.7E-67 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 PANTHER PTHR10025 1 287 2.2E-176 T 22-04-2016 YPTB_RS05715 2878b653f957cd700013190623ede902 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 7.0E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 SUPERFAMILY SSF51735 123 285 1.39E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05715 2878b653f957cd700013190623ede902 288 Gene3D G3DSA:3.40.192.10 7 139 3.3E-50 T 22-04-2016 YPTB_RS05715 2878b653f957cd700013190623ede902 288 Gene3D G3DSA:3.40.50.720 140 264 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05715 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.244 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPTB_RS05715 2878b653f957cd700013190623ede902 288 SUPERFAMILY SSF53223 3 122 1.15E-39 T 22-04-2016 YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 Pfam PF00005 ABC transporter 278 433 1.5E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 Pfam PF00005 ABC transporter 20 171 1.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 SUPERFAMILY SSF52540 3 229 9.67E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 Gene3D G3DSA:3.40.50.300 252 502 8.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 SMART SM00382 286 482 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 SMART SM00382 29 219 6.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 PANTHER PTHR24220 6 387 3.3E-228 T 22-04-2016 YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 PANTHER PTHR24220:SF392 6 387 3.3E-228 T 22-04-2016 YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 Gene3D G3DSA:3.40.50.300 3 234 6.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 SUPERFAMILY SSF52540 243 485 2.57E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21010 8a84eca6c013c4ccf00cf4179f794552 510 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 1.7E-264 T 22-04-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 PIRSF PIRSF002808 6 443 4.3E-143 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 7.6E-143 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 SUPERFAMILY SSF103473 17 434 5.36E-82 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 Gene3D G3DSA:1.20.1250.20 23 211 2.0E-53 T 22-04-2016 YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 Gene3D G3DSA:1.20.1250.20 243 434 1.0E-38 T 22-04-2016 YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 PANTHER PTHR11662:SF286 6 434 2.2E-243 T 22-04-2016 YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 Pfam PF07690 Major Facilitator Superfamily 36 396 2.0E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS20790 d87b535b43c946841644e71e68836ccd 443 PANTHER PTHR11662 6 434 2.2E-243 T 22-04-2016 YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 5.0E-60 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 Gene3D G3DSA:2.40.150.20 1 123 6.1E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 PANTHER PTHR11761 1 123 3.9E-78 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 SMART SM01374 1 123 2.8E-86 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.101 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPTB_RS19965 13b85a28b0b4b309ba6e7945e5bc55a1 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 7.8E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 8.2E-4 T 22-04-2016 YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322 165 196 2.0E-109 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322 17 149 2.0E-109 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 Gene3D G3DSA:3.40.50.720 7 246 1.4E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 SUPERFAMILY SSF51735 10 243 6.71E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 Pfam PF00106 short chain dehydrogenase 14 210 2.4E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322:SF337 165 196 2.0E-109 T 22-04-2016 YPTB_RS11680 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322:SF337 17 149 2.0E-109 T 22-04-2016 YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 PANTHER PTHR11986:SF17 4 427 1.1E-185 T 22-04-2016 YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 Gene3D G3DSA:3.90.1150.10 312 428 4.3E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 428 8.1E-174 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 Pfam PF00202 Aminotransferase class-III 24 426 5.4E-117 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 Gene3D G3DSA:3.40.640.10 58 311 2.9E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 SUPERFAMILY SSF53383 23 427 1.01E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 280 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS15210 2f1f4ac154d1006843efb84af7cca7df 429 PANTHER PTHR11986 4 427 1.1E-185 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 436 2.2E-59 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:1.10.3170.10 156 349 2.1E-62 T 22-04-2016 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Pfam PF13361 UvrD-like helicase C-terminal domain 517 808 4.5E-17 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:1.10.486.10 583 728 2.2E-59 T 22-04-2016 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1193 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 119 216 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 300 772 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 794 1189 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 1 90 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52980 903 1195 1.39E-89 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 729 864 8.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 449 580 8.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52540 119 203 7.62E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52540 12 81 7.62E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52540 325 819 7.62E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1194 15.353 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 121 150 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 7 83 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 350 448 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 119 216 0.0 T 22-04-2016 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 300 772 0.0 T 22-04-2016 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 794 1189 0.0 T 22-04-2016 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 1 90 0.0 T 22-04-2016 YPTB_RS16385 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.90.320.10 893 1196 1.7E-103 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 SUPERFAMILY SSF51735 5 168 5.47E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 Gene3D G3DSA:1.10.1040.10 169 291 1.8E-34 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 SUPERFAMILY SSF48179 170 291 4.76E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 Gene3D G3DSA:3.40.50.720 4 168 8.5E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 167 5.1E-37 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 PANTHER PTHR22981 1 296 2.8E-252 T 22-04-2016 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 PIRSF PIRSF000103 1 296 5.4E-62 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 PANTHER PTHR22981:SF69 1 296 2.8E-252 T 22-04-2016 YPTB_RS19365 a04eeb54b7b72c2d2466691bae4829a5 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 291 2.6E-38 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 PANTHER PTHR24220:SF392 18 389 1.4E-188 T 22-04-2016 YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 SUPERFAMILY SSF52540 14 229 3.38E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 SMART SM00382 288 483 0.003 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 SMART SM00382 41 230 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 Gene3D G3DSA:3.40.50.300 13 229 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 Pfam PF00005 ABC transporter 283 434 4.8E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 Pfam PF00005 ABC transporter 34 179 8.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 Gene3D G3DSA:3.40.50.300 277 497 1.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 PANTHER PTHR24220 18 389 1.4E-188 T 22-04-2016 YPTB_RS07335 321dc28d78b09e8c4eeeff3f1ef31490 504 SUPERFAMILY SSF52540 282 496 1.35E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19820 41ba2dce6ec63213c3bfcdf4da3c0a1a 180 PANTHER PTHR13061 5 178 1.2E-68 T 22-04-2016 YPTB_RS19820 41ba2dce6ec63213c3bfcdf4da3c0a1a 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 8.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS19820 41ba2dce6ec63213c3bfcdf4da3c0a1a 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 131 3.2E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS19820 41ba2dce6ec63213c3bfcdf4da3c0a1a 180 SUPERFAMILY SSF51161 3 175 9.15E-46 T 22-04-2016 IPR011004 Trimeric LpxA-like YPTB_RS19820 41ba2dce6ec63213c3bfcdf4da3c0a1a 180 Gene3D G3DSA:2.160.10.10 4 176 9.3E-45 T 22-04-2016 YPTB_RS01805 d8332cf4f32a0b3d086a7b98ab3b2cef 88 PANTHER PTHR33609 2 88 2.2E-40 T 22-04-2016 YPTB_RS01805 d8332cf4f32a0b3d086a7b98ab3b2cef 88 Pfam PF01527 Transposase 2 71 1.9E-23 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPTB_RS01805 d8332cf4f32a0b3d086a7b98ab3b2cef 88 Gene3D G3DSA:1.10.10.60 7 84 1.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS01805 d8332cf4f32a0b3d086a7b98ab3b2cef 88 SUPERFAMILY SSF46689 1 73 7.7E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 SUPERFAMILY SSF47413 1 92 2.65E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 SUPERFAMILY SSF51306 109 233 1.12E-26 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 Gene3D G3DSA:2.10.109.10 144 235 5.0E-31 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 Pfam PF01381 Helix-turn-helix 25 73 3.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 PANTHER PTHR33516 2 232 8.7E-125 T 22-04-2016 YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 SMART SM00530 16 75 3.4E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 Pfam PF00717 Peptidase S24-like 152 223 8.9E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 Gene3D G3DSA:1.10.260.40 5 83 8.5E-32 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS07020 5527cd9e162f682bb0dc093cc3a7faf1 240 PANTHER PTHR33516:SF3 2 232 8.7E-125 T 22-04-2016 YPTB_RS06260 f04147660f72f62cc24b31a5cd2c2edf 74 PANTHER PTHR30629 10 68 1.3E-13 T 22-04-2016 YPTB_RS06260 f04147660f72f62cc24b31a5cd2c2edf 74 Gene3D G3DSA:1.10.150.130 10 68 6.2E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPTB_RS06260 f04147660f72f62cc24b31a5cd2c2edf 74 PANTHER PTHR30629:SF2 10 68 1.3E-13 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 4.8E-29 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.8E-29 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.8E-29 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.8E-29 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.8E-29 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PANTHER PTHR22912:SF106 1 450 7.7E-258 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 6.4E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 3.5E-218 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PANTHER PTHR22912 1 450 7.7E-258 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 Gene3D G3DSA:3.50.50.60 248 333 2.4E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.7E-34 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 Gene3D G3DSA:3.50.50.60 149 247 5.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-66 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 Gene3D G3DSA:3.50.50.60 3 148 5.7E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 SUPERFAMILY SSF51905 1 365 9.46E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 SUPERFAMILY SSF55424 336 450 4.98E-36 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 PIRSF PIRSF000350 1 447 6.4E-86 T 22-04-2016 YPTB_RS20645 194c029e3a89ff2e9e6ee4b833cc8c7c 450 Gene3D G3DSA:3.30.390.30 338 450 1.6E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.0E-67 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF52016 163 372 1.12E-72 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 PANTHER PTHR11670:SF39 305 860 0.0 T 22-04-2016 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF74778 2 160 6.54E-68 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.30.499.10 402 519 4.9E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF53732 379 859 2.09E-150 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 PANTHER PTHR11670 305 860 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.40.1060.10 520 682 8.8E-86 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.7E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.6E-97 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.30.499.10 684 859 4.3E-55 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS04005 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.20.19.10 162 360 1.2E-94 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 SUPERFAMILY SSF51905 7 180 5.88E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 SUPERFAMILY SSF51905 269 384 5.88E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 PANTHER PTHR13789 1 393 4.3E-268 T 22-04-2016 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 PANTHER PTHR13789:SF233 1 393 4.3E-268 T 22-04-2016 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 392 1.3E-124 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 Pfam PF01494 FAD binding domain 8 341 3.0E-26 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 Gene3D G3DSA:3.50.50.60 270 358 9.3E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 Gene3D G3DSA:3.50.50.60 7 185 9.3E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 5.4E-18 T 22-04-2016 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 5.4E-18 T 22-04-2016 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 5.4E-18 T 22-04-2016 YPTB_RS06130 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.4E-18 T 22-04-2016 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 Gene3D G3DSA:3.10.290.10 9 105 6.0E-39 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 Pfam PF01479 S4 domain 11 57 1.0E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 PIRSF PIRSF016821 8 135 1.1E-42 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 SUPERFAMILY SSF55174 10 106 7.59E-31 T 22-04-2016 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079:SF70 4 64 1.5E-29 T 22-04-2016 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079:SF70 111 117 1.5E-29 T 22-04-2016 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079 4 64 1.5E-29 T 22-04-2016 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079 111 117 1.5E-29 T 22-04-2016 YPTB_RS20330 45ce53a4442fb25d1dfc86181590990f 135 SMART SM00363 11 72 9.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS04155 7d4ac16be3304ee5faed5392ddd0723b 280 Gene3D G3DSA:3.40.50.1980 28 146 1.9E-33 T 22-04-2016 YPTB_RS04155 7d4ac16be3304ee5faed5392ddd0723b 280 Gene3D G3DSA:3.40.50.1980 149 269 5.3E-31 T 22-04-2016 YPTB_RS04155 7d4ac16be3304ee5faed5392ddd0723b 280 Pfam PF01497 Periplasmic binding protein 31 225 8.1E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS04155 7d4ac16be3304ee5faed5392ddd0723b 280 PANTHER PTHR30535 25 269 4.5E-54 T 22-04-2016 YPTB_RS04155 7d4ac16be3304ee5faed5392ddd0723b 280 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 8 273 52.754 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 YPTB_RS04155 7d4ac16be3304ee5faed5392ddd0723b 280 SUPERFAMILY SSF53807 28 269 1.02E-55 T 22-04-2016 YPTB_RS14370 cca18648ea16ca6297e09b23f95a7e8a 180 PANTHER PTHR34478 1 175 5.2E-77 T 22-04-2016 YPTB_RS14370 cca18648ea16ca6297e09b23f95a7e8a 180 Pfam PF04011 LemA family 7 174 1.9E-56 T 22-04-2016 IPR007156 LemA YPTB_RS14370 cca18648ea16ca6297e09b23f95a7e8a 180 Gene3D G3DSA:1.20.1440.20 12 173 3.4E-55 T 22-04-2016 IPR023353 LemA-like domain YPTB_RS14370 cca18648ea16ca6297e09b23f95a7e8a 180 SUPERFAMILY SSF140478 25 169 1.31E-46 T 22-04-2016 IPR023353 LemA-like domain YPTB_RS14370 cca18648ea16ca6297e09b23f95a7e8a 180 PANTHER PTHR34478:SF2 1 175 5.2E-77 T 22-04-2016 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Pfam PF01266 FAD dependent oxidoreductase 4 350 7.7E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF51905 313 370 3.56E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF51905 2 216 3.56E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF54373 212 313 2.63E-20 T 22-04-2016 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 PANTHER PTHR10961:SF7 1 371 1.5E-119 T 22-04-2016 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.50.50.60 146 208 6.9E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.50.50.60 2 57 6.9E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.50.50.60 316 370 6.9E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.30.9.10 59 145 1.2E-52 T 22-04-2016 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.30.9.10 211 313 1.2E-52 T 22-04-2016 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 PANTHER PTHR10961 1 371 1.5E-119 T 22-04-2016 YPTB_RS13500 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 77.871 T 22-04-2016 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 YPTB_RS00835 1021dc1677af3d1df977afe9ee2bfb49 85 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 81 0.009 T 22-04-2016 YPTB_RS00835 1021dc1677af3d1df977afe9ee2bfb49 85 Pfam PF13710 ACT domain 13 73 1.5E-27 T 22-04-2016 YPTB_RS00835 1021dc1677af3d1df977afe9ee2bfb49 85 Gene3D G3DSA:3.30.70.260 1 77 7.0E-14 T 22-04-2016 YPTB_RS00835 1021dc1677af3d1df977afe9ee2bfb49 85 SUPERFAMILY SSF55021 3 76 2.25E-13 T 22-04-2016 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 Gene3D G3DSA:3.30.420.40 261 503 5.8E-105 T 22-04-2016 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 258 7.9E-92 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 Hamap MF_00186 Glycerol kinase [glpK]. 9 503 60.09 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 PIRSF PIRSF000538 9 507 2.9E-180 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 SUPERFAMILY SSF53067 10 261 3.89E-96 T 22-04-2016 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 456 8.1E-63 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 141 153 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 PANTHER PTHR10196 1 507 2.0E-269 T 22-04-2016 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 PANTHER PTHR10196:SF9 1 507 2.0E-269 T 22-04-2016 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 502 7.9E-230 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 Gene3D G3DSA:3.30.420.40 8 259 3.7E-108 T 22-04-2016 YPTB_RS00530 12ab2473351bd8b2730eb7165c727c5e 507 SUPERFAMILY SSF53067 261 503 2.96E-86 T 22-04-2016 YPTB_RS10780 7aae367ee9a7abbef4762fd1e2e046ea 268 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 2.5E-63 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase YPTB_RS10780 7aae367ee9a7abbef4762fd1e2e046ea 268 Gene3D G3DSA:3.40.630.40 6 265 1.8E-85 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS10780 7aae367ee9a7abbef4762fd1e2e046ea 268 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 265 9.7E-128 T 22-04-2016 IPR010247 N-formylglutamate deformylase YPTB_RS10780 7aae367ee9a7abbef4762fd1e2e046ea 268 SUPERFAMILY SSF53187 5 264 8.16E-76 T 22-04-2016 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 Hamap MF_00475 Trp operon repressor [trpR]. 36 129 23.4 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 Gene3D G3DSA:1.10.1270.10 31 128 8.9E-45 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 TIGRFAM TIGR01321 TrpR: trp operon repressor 35 125 4.9E-35 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 31 122 1.0E-35 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 Pfam PF01371 Trp repressor protein 38 124 2.2E-29 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 PANTHER PTHR38025:SF1 14 130 6.1E-53 T 22-04-2016 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 PANTHER PTHR38025 14 130 6.1E-53 T 22-04-2016 YPTB_RS03365 0f4fc75ad635b4a48cb3e43e6a31f147 130 SUPERFAMILY SSF48295 27 125 2.62E-28 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82693 559 632 8.89E-6 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.70.1430 40 139 1.1E-23 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 PANTHER PTHR32063 1 1024 0.0 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82693 40 135 3.79E-19 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.70.1430 561 636 6.8E-5 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.2090.10 184 268 2.4E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.2090.10 723 792 6.6E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82714 184 268 3.66E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82714 722 792 1.14E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:1.10.3850.10 803 1013 1.1E-55 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:1.20.1640.10 290 500 5.9E-45 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 Pfam PF00873 AcrB/AcrD/AcrF family 6 1011 9.6E-162 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82866 293 489 1.83E-36 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 PANTHER PTHR32063:SF18 1 1024 0.0 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82693 136 182 9.77E-23 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82693 270 326 9.77E-23 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82866 795 1014 1.29E-45 T 22-04-2016 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS03195 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS03915 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPTB_RS03915 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS03915 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPTB_RS03915 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS03915 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS03915 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 1.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 8.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 SMART SM00387 338 448 9.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 Pfam PF00672 HAMP domain 159 224 1.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 SUPERFAMILY SSF158472 173 225 5.23E-8 T 22-04-2016 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 Gene3D G3DSA:1.10.287.130 218 287 8.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 PANTHER PTHR24423 166 449 6.2E-130 T 22-04-2016 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 PANTHER PTHR24423 57 80 6.2E-130 T 22-04-2016 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 PANTHER PTHR24423:SF564 166 449 6.2E-130 T 22-04-2016 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 PANTHER PTHR24423:SF564 57 80 6.2E-130 T 22-04-2016 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 SMART SM00304 172 227 3.7E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 Gene3D G3DSA:3.30.565.10 297 446 3.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 SMART SM00388 228 291 7.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 SUPERFAMILY SSF47384 212 291 2.16E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS14740 d2ea51cf60021ea5b282f5de37f8ddbe 449 SUPERFAMILY SSF55874 281 446 9.56E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 SUPERFAMILY SSF51126 70 346 5.65E-45 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 PANTHER PTHR32093 72 463 9.1E-25 T 22-04-2016 YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 Pfam PF05860 haemagglutination activity domain 70 183 8.9E-24 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 Gene3D G3DSA:2.160.20.10 71 348 4.7E-68 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 85 180 2.8E-18 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 300 340 1.4E-5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 397 422 2.3 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 PANTHER PTHR32093:SF41 72 463 9.1E-25 T 22-04-2016 YPTB_RS20780 58fb3bb91f93b27205e49dbee139ff47 463 SMART SM00912 67 184 5.8E-34 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 Pfam PF11713 Peptidase C80 family 772 924 2.6E-31 T 22-04-2016 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 Pfam PF11713 Peptidase C80 family 1084 1260 7.0E-31 T 22-04-2016 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 SUPERFAMILY SSF51120 2631 2753 8.76E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 SUPERFAMILY SSF69318 1784 2052 2.49E-17 T 22-04-2016 YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 Gene3D G3DSA:2.150.10.10 2647 2752 1.8E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 Gene3D G3DSA:2.150.10.10 2139 2375 3.1E-9 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 Gene3D G3DSA:2.150.10.10 2486 2596 7.3E-7 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 SUPERFAMILY SSF51120 2486 2568 3.47E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 SUPERFAMILY SSF51120 2243 2277 3.47E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 SUPERFAMILY SSF51120 2156 2214 3.47E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 PANTHER PTHR36921 1 1238 7.1E-300 T 22-04-2016 YPTB_RS17435 607e4cab326eb1e35543e66ac5fe8757 3103 PANTHER PTHR36921 1261 2839 7.1E-300 T 22-04-2016 YPTB_RS18070 98344f96342e234b2f86f0b2d2f77665 88 SUPERFAMILY SSF101498 42 85 1.03E-6 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPTB_RS18070 98344f96342e234b2f86f0b2d2f77665 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 86 6.3E-14 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPTB_RS18070 98344f96342e234b2f86f0b2d2f77665 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 84 3.5E-6 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPTB_RS21040 85c9aeb4c6c2e499c1cf4cd4cfc9bcd1 832 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 310 320 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPTB_RS21040 85c9aeb4c6c2e499c1cf4cd4cfc9bcd1 832 Pfam PF13954 PapC N-terminal domain 35 178 2.1E-33 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS21040 85c9aeb4c6c2e499c1cf4cd4cfc9bcd1 832 Pfam PF00577 Outer membrane usher protein 197 747 5.5E-160 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS21040 85c9aeb4c6c2e499c1cf4cd4cfc9bcd1 832 Pfam PF13953 PapC C-terminal domain 760 814 8.4E-15 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS21040 85c9aeb4c6c2e499c1cf4cd4cfc9bcd1 832 SUPERFAMILY SSF141729 34 154 1.03E-28 T 22-04-2016 YPTB_RS21040 85c9aeb4c6c2e499c1cf4cd4cfc9bcd1 832 PANTHER PTHR30451:SF4 1 832 0.0 T 22-04-2016 YPTB_RS21040 85c9aeb4c6c2e499c1cf4cd4cfc9bcd1 832 PANTHER PTHR30451 1 832 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 Gene3D G3DSA:1.10.10.10 224 282 5.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 Pfam PF04545 Sigma-70, region 4 229 280 3.6E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.404 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 280 3.6E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 SUPERFAMILY SSF88659 200 284 6.35E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 Gene3D G3DSA:1.10.601.10 15 122 1.2E-33 T 22-04-2016 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 PANTHER PTHR30376 2 284 2.1E-129 T 22-04-2016 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 PIRSF PIRSF000770 5 285 4.3E-32 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.2E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 SUPERFAMILY SSF88946 12 122 2.98E-39 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 Pfam PF04542 Sigma-70 region 2 53 122 1.5E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.1E-129 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS01335 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 Gene3D G3DSA:3.30.230.10 5 207 1.5E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.9E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00473 Galactokinase signature 27 45 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00473 Galactokinase signature 112 130 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00473 Galactokinase signature 92 103 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00473 Galactokinase signature 263 277 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PANTHER PTHR10457 2 381 3.1E-149 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 SUPERFAMILY SSF55060 205 381 1.54E-52 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 TIGRFAM TIGR00131 gal_kin: galactokinase 5 383 2.3E-151 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 Hamap MF_00246 Galactokinase [galK]. 25 382 42.327 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 Gene3D G3DSA:3.30.70.890 208 381 6.3E-58 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 Pfam PF08544 GHMP kinases C terminal 279 361 9.3E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PANTHER PTHR10457:SF6 2 381 3.1E-149 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 SUPERFAMILY SSF54211 3 203 1.29E-63 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 Pfam PF10509 Galactokinase galactose-binding signature 11 57 6.4E-22 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 PIRSF PIRSF000530 1 383 3.9E-118 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06485 e5d2e3acbcba21490e2198ae615de50b 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 2.8E-83 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 PANTHER PTHR33516 1 202 9.1E-108 T 22-04-2016 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 SUPERFAMILY SSF46785 3 69 6.36E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 PANTHER PTHR33516:SF2 1 202 9.1E-108 T 22-04-2016 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 SUPERFAMILY SSF51306 76 198 1.26E-38 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-29 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.42 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 Gene3D G3DSA:2.10.109.10 76 198 2.3E-46 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 Pfam PF00717 Peptidase S24-like 114 179 4.4E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YPTB_RS02150 24581eb8c2ba7bd79c5837445181b0d7 202 Gene3D G3DSA:1.10.10.10 1 69 9.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16935 065983b70c338e5179c10507ffde436d 327 PANTHER PTHR30349 80 317 1.2E-34 T 22-04-2016 YPTB_RS16935 065983b70c338e5179c10507ffde436d 327 PANTHER PTHR30349:SF20 80 317 1.2E-34 T 22-04-2016 YPTB_RS16935 065983b70c338e5179c10507ffde436d 327 Pfam PF00589 Phage integrase family 164 307 1.8E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS16935 065983b70c338e5179c10507ffde436d 327 SUPERFAMILY SSF56349 60 316 7.95E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS16935 065983b70c338e5179c10507ffde436d 327 Gene3D G3DSA:1.10.443.10 162 316 3.8E-37 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS03080 92c906f8691b1100b8a950eb36752943 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 2.8E-38 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 YPTB_RS03080 92c906f8691b1100b8a950eb36752943 106 Gene3D G3DSA:3.40.50.2300 2 100 4.5E-40 T 22-04-2016 YPTB_RS03080 92c906f8691b1100b8a950eb36752943 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 4.5E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS03080 92c906f8691b1100b8a950eb36752943 106 PANTHER PTHR30505 1 103 1.4E-39 T 22-04-2016 YPTB_RS03080 92c906f8691b1100b8a950eb36752943 106 SUPERFAMILY SSF52794 3 99 1.92E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS13855 f45c55a141a0fa2eeac9588d82078f4e 336 Pfam PF05971 Protein of unknown function (DUF890) 25 322 6.2E-122 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 YPTB_RS13855 f45c55a141a0fa2eeac9588d82078f4e 336 PANTHER PTHR13393 13 330 8.6E-142 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 YPTB_RS13855 f45c55a141a0fa2eeac9588d82078f4e 336 PANTHER PTHR13393:SF0 13 330 8.6E-142 T 22-04-2016 YPTB_RS13855 f45c55a141a0fa2eeac9588d82078f4e 336 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 26 325 53.881 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YPTB_RS13855 f45c55a141a0fa2eeac9588d82078f4e 336 Gene3D G3DSA:3.40.50.150 128 233 2.7E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS13855 f45c55a141a0fa2eeac9588d82078f4e 336 SUPERFAMILY SSF53335 63 321 7.94E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS13855 f45c55a141a0fa2eeac9588d82078f4e 336 PIRSF PIRSF029038 15 335 8.0E-154 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 SUPERFAMILY SSF52540 4 415 5.33E-139 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 SUPERFAMILY SSF52540 459 579 3.26E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 SUPERFAMILY SSF52540 37 82 3.26E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 SMART SM00487 9 426 3.3E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 PANTHER PTHR24029 1 670 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 SUPERFAMILY SSF46600 620 667 2.48E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF00271 Helicase conserved C-terminal domain 435 545 1.5E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.0E-20 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF04851 Type III restriction enzyme, res subunit 15 92 3.6E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:4.10.860.10 626 670 3.4E-19 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.30.2060.10 159 231 5.5E-11 T 22-04-2016 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 SMART SM00490 460 546 6.7E-20 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.40.50.300 421 581 3.3E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.40.50.300 278 338 5.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.40.50.300 388 406 5.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.40.50.300 6 89 5.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF02151 UvrB/uvrC motif 632 666 1.5E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPTB_RS06580 f84396a663e609afaaa3ccc52ae18300 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.955 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 Gene3D G3DSA:3.40.50.300 3 224 1.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 Pfam PF02687 FtsX-like permease family 528 642 3.2E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 Pfam PF12704 MacB-like periplasmic core domain 273 491 2.3E-36 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 PANTHER PTHR24220 6 232 1.7E-102 T 22-04-2016 YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 Pfam PF00005 ABC transporter 24 172 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 SUPERFAMILY SSF52540 4 225 2.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 PANTHER PTHR24220:SF86 6 232 1.7E-102 T 22-04-2016 YPTB_RS07685 0f067b535f81dc351886a6b81d5d362c 649 SMART SM00382 33 220 2.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS18340 02071d5f77d07bd6609a4cccf10e0e1c 194 PANTHER PTHR10204:SF36 1 190 1.9E-135 T 22-04-2016 YPTB_RS18340 02071d5f77d07bd6609a4cccf10e0e1c 194 PANTHER PTHR10204 1 190 1.9E-135 T 22-04-2016 YPTB_RS18340 02071d5f77d07bd6609a4cccf10e0e1c 194 SUPERFAMILY SSF52218 1 191 1.06E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS18340 02071d5f77d07bd6609a4cccf10e0e1c 194 Gene3D G3DSA:3.40.50.360 1 190 1.6E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS18340 02071d5f77d07bd6609a4cccf10e0e1c 194 Pfam PF02525 Flavodoxin-like fold 3 188 3.3E-36 T 22-04-2016 IPR003680 Flavodoxin-like fold YPTB_RS04830 68324c0d7f6e6f833a8445dfb0cbfa7a 222 PANTHER PTHR30614:SF18 1 222 1.6E-104 T 22-04-2016 YPTB_RS04830 68324c0d7f6e6f833a8445dfb0cbfa7a 222 PANTHER PTHR30614 1 222 1.6E-104 T 22-04-2016 YPTB_RS04830 68324c0d7f6e6f833a8445dfb0cbfa7a 222 SUPERFAMILY SSF161098 15 202 4.97E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS04830 68324c0d7f6e6f833a8445dfb0cbfa7a 222 Gene3D G3DSA:1.10.3720.10 13 210 6.6E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS04830 68324c0d7f6e6f833a8445dfb0cbfa7a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 209 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS04830 68324c0d7f6e6f833a8445dfb0cbfa7a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 2.7E-26 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS12325 aa2056c8688d31370fc0f2575a559f06 167 PANTHER PTHR10681 1 167 1.5E-54 T 22-04-2016 YPTB_RS12325 aa2056c8688d31370fc0f2575a559f06 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 YPTB_RS12325 aa2056c8688d31370fc0f2575a559f06 167 Pfam PF08534 Redoxin 21 163 2.8E-29 T 22-04-2016 IPR013740 Redoxin GO:0016491 YPTB_RS12325 aa2056c8688d31370fc0f2575a559f06 167 PANTHER PTHR10681:SF81 1 167 1.5E-54 T 22-04-2016 YPTB_RS12325 aa2056c8688d31370fc0f2575a559f06 167 SUPERFAMILY SSF52833 4 164 1.86E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS12325 aa2056c8688d31370fc0f2575a559f06 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 40.468 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 YPTB_RS12325 aa2056c8688d31370fc0f2575a559f06 167 Gene3D G3DSA:3.40.30.10 4 167 1.6E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS05085 f4d03998c2b48216eafbb970e9763e0c 414 PANTHER PTHR30337 1 412 7.6E-155 T 22-04-2016 YPTB_RS05085 f4d03998c2b48216eafbb970e9763e0c 414 Pfam PF00149 Calcineurin-like phosphoesterase 1 97 2.7E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPTB_RS05085 f4d03998c2b48216eafbb970e9763e0c 414 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 4.6E-76 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 YPTB_RS05085 f4d03998c2b48216eafbb970e9763e0c 414 PANTHER PTHR30337:SF0 1 412 7.6E-155 T 22-04-2016 YPTB_RS05085 f4d03998c2b48216eafbb970e9763e0c 414 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 378 1.0E-24 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPTB_RS05085 f4d03998c2b48216eafbb970e9763e0c 414 SUPERFAMILY SSF56300 1 340 2.66E-59 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS05085 f4d03998c2b48216eafbb970e9763e0c 414 Gene3D G3DSA:3.60.21.10 1 277 3.7E-65 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 Pfam PF00583 Acetyltransferase (GNAT) family 50 122 2.4E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 Gene3D G3DSA:3.40.630.30 7 144 1.8E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 SUPERFAMILY SSF54637 155 297 3.43E-43 T 22-04-2016 IPR029069 HotDog domain YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 Gene3D G3DSA:3.10.129.10 145 298 1.5E-65 T 22-04-2016 IPR029069 HotDog domain YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 PANTHER PTHR23091 1 178 9.6E-100 T 22-04-2016 YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 SUPERFAMILY SSF55729 2 170 2.36E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 3.1E-49 T 22-04-2016 IPR012660 Thioesterase, putative YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 PANTHER PTHR23091:SF249 1 178 9.6E-100 T 22-04-2016 YPTB_RS00245 b4d7c1cff6228b86062cd2569def1709 307 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 2.0E-50 T 22-04-2016 IPR012660 Thioesterase, putative YPTB_RS20300 cb1a23b52c97bd3dbb019908bb52eacd 298 Pfam PF11104 Type IV pilus assembly protein PilM; 9 167 4.3E-18 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM YPTB_RS20300 cb1a23b52c97bd3dbb019908bb52eacd 298 PANTHER PTHR32432 1 273 4.3E-64 T 22-04-2016 YPTB_RS20300 cb1a23b52c97bd3dbb019908bb52eacd 298 PANTHER PTHR32432:SF3 1 273 4.3E-64 T 22-04-2016 YPTB_RS20300 cb1a23b52c97bd3dbb019908bb52eacd 298 SUPERFAMILY SSF53067 29 165 2.85E-6 T 22-04-2016 YPTB_RS03110 31f78e3979101c61187077b6dee3ae3e 339 PANTHER PTHR32196:SF1 23 330 2.4E-161 T 22-04-2016 IPR030159 Autoinducer 2-binding protein LsrB/rhamnose-binding protein RhaS GO:0043190 YPTB_RS03110 31f78e3979101c61187077b6dee3ae3e 339 Gene3D G3DSA:3.40.50.2300 28 148 1.8E-29 T 22-04-2016 YPTB_RS03110 31f78e3979101c61187077b6dee3ae3e 339 SUPERFAMILY SSF53822 26 339 8.01E-82 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS03110 31f78e3979101c61187077b6dee3ae3e 339 Gene3D G3DSA:3.40.50.2300 149 296 8.8E-32 T 22-04-2016 YPTB_RS03110 31f78e3979101c61187077b6dee3ae3e 339 Pfam PF13407 Periplasmic binding protein domain 29 284 2.6E-53 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS03110 31f78e3979101c61187077b6dee3ae3e 339 PANTHER PTHR32196 23 330 2.4E-161 T 22-04-2016 YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 PIRSF PIRSF002741 1 543 3.1E-102 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 Gene3D G3DSA:3.90.76.10 46 224 1.1E-45 T 22-04-2016 YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 PANTHER PTHR30290 1 543 0.0 T 22-04-2016 YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 458 1.8E-88 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 Gene3D G3DSA:3.10.105.10 294 509 4.6E-60 T 22-04-2016 YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 PANTHER PTHR30290:SF28 1 543 0.0 T 22-04-2016 YPTB_RS12385 4bff23ffe77ad064a4505fd71b16cbe6 547 SUPERFAMILY SSF53850 37 538 4.16E-139 T 22-04-2016 YPTB_RS12655 abc8690b5e7b24ad29c7911636fe49a2 487 PANTHER PTHR32057 11 487 5.8E-200 T 22-04-2016 YPTB_RS12655 abc8690b5e7b24ad29c7911636fe49a2 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 10 457 5.2E-157 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 YPTB_RS12655 abc8690b5e7b24ad29c7911636fe49a2 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 7 473 45.466 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 YPTB_RS16145 5f7091e68217f528b4814283a1022138 182 PANTHER PTHR38784:SF1 1 182 1.1E-100 T 22-04-2016 YPTB_RS16145 5f7091e68217f528b4814283a1022138 182 Gene3D G3DSA:3.10.640.10 1 178 9.4E-81 T 22-04-2016 YPTB_RS16145 5f7091e68217f528b4814283a1022138 182 SMART SM01322 1 176 7.4E-117 T 22-04-2016 IPR009822 YaeQ YPTB_RS16145 5f7091e68217f528b4814283a1022138 182 PANTHER PTHR38784 1 182 1.1E-100 T 22-04-2016 YPTB_RS16145 5f7091e68217f528b4814283a1022138 182 Pfam PF07152 YaeQ protein 1 173 1.5E-74 T 22-04-2016 IPR009822 YaeQ YPTB_RS16145 5f7091e68217f528b4814283a1022138 182 SUPERFAMILY SSF52980 2 178 2.68E-70 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPTB_RS16145 5f7091e68217f528b4814283a1022138 182 PIRSF PIRSF011484 1 180 1.9E-68 T 22-04-2016 IPR009822 YaeQ YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 PANTHER PTHR24096 1442 1517 1.1E-290 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 PANTHER PTHR24096 453 528 1.1E-290 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 PANTHER PTHR24096 563 1024 1.1E-290 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Pfam PF00668 Condensation domain 82 377 3.7E-36 T 22-04-2016 IPR001242 Condensation domain YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:2.30.38.10 879 956 1.5E-22 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Pfam PF08242 Methyltransferase domain 1247 1346 1.2E-16 T 22-04-2016 IPR013217 Methyltransferase type 12 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 SUPERFAMILY SSF47336 1489 1563 2.49E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:3.40.50.980 718 878 2.4E-43 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 SUPERFAMILY SSF52777 253 505 5.45E-41 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Pfam PF00550 Phosphopantetheine attachment site 1506 1562 2.3E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 597 990 8.2E-112 T 22-04-2016 IPR010071 Amino acid adenylation domain YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:3.40.50.150 1212 1398 5.2E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1516 1531 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 SUPERFAMILY SSF52777 77 263 2.11E-17 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Pfam PF08415 Nonribosomal peptide synthase 400 461 1.0E-16 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Pfam PF00975 Thioesterase domain 1601 1699 4.4E-13 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 SUPERFAMILY SSF56801 1432 1477 5.36E-127 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 SUPERFAMILY SSF56801 537 1003 5.36E-127 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Pfam PF00501 AMP-binding enzyme 579 966 1.9E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:3.30.300.30 961 1021 2.2E-29 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:3.30.300.30 1431 1498 2.2E-29 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 SUPERFAMILY SSF53335 1222 1414 4.3E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 SUPERFAMILY SSF53474 1597 1883 8.11E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 PANTHER PTHR24096:SF179 1442 1517 1.1E-290 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 PANTHER PTHR24096:SF179 453 528 1.1E-290 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 PANTHER PTHR24096:SF179 563 1024 1.1E-290 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:3.40.50.1820 1814 1883 1.2E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:3.40.50.1820 1595 1702 1.2E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:3.40.50.980 569 717 7.3E-34 T 22-04-2016 YPTB_RS17830 0c32abe1e6a3998c61092e1e57d94e7d 1888 Gene3D G3DSA:1.10.1200.10 1499 1569 3.2E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17850 ec423ad53f62cfc9b1f35977d5ac96e4 690 PANTHER PTHR32552 1 690 8.4E-281 T 22-04-2016 YPTB_RS17850 ec423ad53f62cfc9b1f35977d5ac96e4 690 Gene3D G3DSA:2.170.130.10 28 159 3.9E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS17850 ec423ad53f62cfc9b1f35977d5ac96e4 690 Gene3D G3DSA:2.40.170.20 160 690 2.0E-87 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS17850 ec423ad53f62cfc9b1f35977d5ac96e4 690 PANTHER PTHR32552:SF33 1 690 8.4E-281 T 22-04-2016 YPTB_RS17850 ec423ad53f62cfc9b1f35977d5ac96e4 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 150 6.6E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS17850 ec423ad53f62cfc9b1f35977d5ac96e4 690 SUPERFAMILY SSF56935 31 690 2.99E-119 T 22-04-2016 YPTB_RS17850 ec423ad53f62cfc9b1f35977d5ac96e4 690 Pfam PF00593 TonB dependent receptor 442 688 2.1E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS01330 0f174b6e35fc67a567d9cfe7ed461537 317 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 19 316 1.6E-130 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 YPTB_RS01330 0f174b6e35fc67a567d9cfe7ed461537 317 PANTHER PTHR30489 17 316 3.0E-60 T 22-04-2016 YPTB_RS01330 0f174b6e35fc67a567d9cfe7ed461537 317 Pfam PF02687 FtsX-like permease family 193 307 3.4E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS01330 0f174b6e35fc67a567d9cfe7ed461537 317 PIRSF PIRSF003097 16 313 1.0E-94 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 8.4E-15 T 22-04-2016 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 8.4E-15 T 22-04-2016 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 8.4E-15 T 22-04-2016 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 8.4E-15 T 22-04-2016 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PANTHER PTHR13789:SF214 1 392 1.9E-215 T 22-04-2016 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 Pfam PF01494 FAD binding domain 2 343 2.0E-22 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 SUPERFAMILY SSF51905 265 382 1.21E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 SUPERFAMILY SSF51905 2 175 1.21E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 2.7E-146 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 Gene3D G3DSA:3.50.50.60 266 354 1.3E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 Gene3D G3DSA:3.50.50.60 2 180 1.3E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 388 9.5E-133 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YPTB_RS17250 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PANTHER PTHR13789 1 392 1.9E-215 T 22-04-2016 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 Pfam PF05036 Sporulation related domain 286 357 1.4E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 SUPERFAMILY SSF50685 75 164 4.19E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183 282 360 6.5E-127 T 22-04-2016 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183 32 228 6.5E-127 T 22-04-2016 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 SUPERFAMILY SSF110997 286 357 4.58E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 Gene3D G3DSA:3.30.70.1070 286 357 1.9E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 Gene3D G3DSA:2.40.40.10 116 167 3.3E-4 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183:SF1 282 360 6.5E-127 T 22-04-2016 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183:SF1 32 228 6.5E-127 T 22-04-2016 YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 177 6.4E-35 T 22-04-2016 IPR012997 Rare lipoprotein A YPTB_RS06035 383c247f34415e2eb90830ed90e0a802 360 Pfam PF03330 Lytic transglycolase 78 164 1.3E-23 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTB_RS05115 9f0e16d842fa9d12f91423a4022a0854 463 Pfam PF00324 Amino acid permease 17 455 5.0E-108 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS05115 9f0e16d842fa9d12f91423a4022a0854 463 PIRSF PIRSF006060 4 463 1.3E-71 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS05115 9f0e16d842fa9d12f91423a4022a0854 463 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS05115 9f0e16d842fa9d12f91423a4022a0854 463 PANTHER PTHR11785 1 463 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS05115 9f0e16d842fa9d12f91423a4022a0854 463 PANTHER PTHR11785:SF352 1 463 0.0 T 22-04-2016 YPTB_RS03120 217a67f982f1b933b97109e4cb666ae5 351 PANTHER PTHR32196:SF29 1 325 3.8E-184 T 22-04-2016 YPTB_RS03120 217a67f982f1b933b97109e4cb666ae5 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 301 1.4E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS03120 217a67f982f1b933b97109e4cb666ae5 351 PANTHER PTHR32196 1 325 3.8E-184 T 22-04-2016 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 320 394 1.7E-14 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 PANTHER PTHR23389:SF7 1 529 0.0 T 22-04-2016 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 Gene3D G3DSA:1.10.150.20 422 489 1.0E-7 T 22-04-2016 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 SMART SM00532 36 435 3.4E-42 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 Gene3D G3DSA:3.30.470.30 136 253 5.1E-18 T 22-04-2016 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 125 315 6.7E-18 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 SUPERFAMILY SSF47781 397 562 8.15E-32 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 SUPERFAMILY SSF50249 317 397 4.28E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 Hamap MF_01587 DNA ligase B [ligB]. 5 563 54.08 T 22-04-2016 IPR020923 DNA ligase B GO:0003911|GO:0006259 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 PANTHER PTHR23389 1 529 0.0 T 22-04-2016 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 SUPERFAMILY SSF56091 32 314 7.34E-68 T 22-04-2016 YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 Gene3D G3DSA:2.40.50.140 318 389 1.3E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS00290 a12f4abfaf1548508d7894c0c8af6ed3 567 Gene3D G3DSA:1.10.287.610 37 76 1.4E-5 T 22-04-2016 YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 PANTHER PTHR10516:SF316 129 196 7.7E-70 T 22-04-2016 YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 PANTHER PTHR10516:SF316 1 83 7.7E-70 T 22-04-2016 YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 SUPERFAMILY SSF54534 2 140 2.55E-32 T 22-04-2016 YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 7.7E-9 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 PANTHER PTHR10516 129 196 7.7E-70 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 PANTHER PTHR10516 1 83 7.7E-70 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 Gene3D G3DSA:3.10.50.40 2 80 5.6E-16 T 22-04-2016 YPTB_RS20085 3b21bd6a9bdeaac0e60731aa65e925f8 197 Gene3D G3DSA:3.10.50.40 126 141 5.6E-16 T 22-04-2016 YPTB_RS09410 46825cb408b772932c6b39f394eeb8a8 120 Gene3D G3DSA:1.20.58.380 5 93 2.2E-27 T 22-04-2016 YPTB_RS09410 46825cb408b772932c6b39f394eeb8a8 120 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 26.22 T 22-04-2016 IPR008622 Flagellar protein FliT YPTB_RS09410 46825cb408b772932c6b39f394eeb8a8 120 Pfam PF05400 Flagellar protein FliT 21 106 1.1E-20 T 22-04-2016 IPR008622 Flagellar protein FliT YPTB_RS18690 f6e0c1ec6d09260b4689e654949f5b54 166 Pfam PF07262 Protein of unknown function (DUF1436) 10 164 7.6E-47 T 22-04-2016 IPR009888 Immunity protein CdiI-o11 YPTB_RS18690 f6e0c1ec6d09260b4689e654949f5b54 166 SUPERFAMILY SSF160207 1 165 3.53E-65 T 22-04-2016 IPR023127 NMB0488-like domain YPTB_RS18690 f6e0c1ec6d09260b4689e654949f5b54 166 Gene3D G3DSA:3.40.1590.10 1 165 2.1E-67 T 22-04-2016 IPR023127 NMB0488-like domain YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 Gene3D G3DSA:2.30.130.10 273 365 6.0E-25 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 Gene3D G3DSA:3.40.1160.10 4 258 9.6E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 Pfam PF01472 PUA domain 276 350 8.2E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 SUPERFAMILY SSF53633 6 256 3.14E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 Pfam PF00696 Amino acid kinase family 6 234 7.9E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 PIRSF PIRSF000729 1 367 2.8E-141 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 SMART SM00359 276 359 1.7E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 SUPERFAMILY SSF88697 276 366 5.36E-23 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 2.5E-151 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 35.796 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05020 2bba4a88aae9bf859fc4d706999c715f 367 PANTHER PTHR11063 5 367 4.6E-145 T 22-04-2016 YPTB_RS15885 3705a1dacd241c7a8bd88aafc2e1d32a 352 Pfam PF03824 High-affinity nickel-transport protein 48 337 6.1E-91 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YPTB_RS15885 3705a1dacd241c7a8bd88aafc2e1d32a 352 PANTHER PTHR31611 18 350 8.7E-120 T 22-04-2016 YPTB_RS15885 3705a1dacd241c7a8bd88aafc2e1d32a 352 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 333 2.2E-126 T 22-04-2016 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 SUPERFAMILY SSF53067 2 242 2.68E-73 T 22-04-2016 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 Gene3D G3DSA:3.30.420.40 1 240 8.1E-69 T 22-04-2016 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.5E-83 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 PANTHER PTHR10196:SF72 1 484 0.0 T 22-04-2016 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 PIRSF PIRSF000538 1 484 2.3E-137 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 PANTHER PTHR10196 1 484 0.0 T 22-04-2016 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 436 4.9E-30 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 SUPERFAMILY SSF53067 242 482 1.94E-64 T 22-04-2016 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 1.1E-184 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 Gene3D G3DSA:3.30.420.40 243 482 9.7E-54 T 22-04-2016 YPTB_RS21025 65a5107375033fdac8b532ae9aa634e0 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 PANTHER PTHR30111 1 289 1.7E-92 T 22-04-2016 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 Pfam PF01430 Hsp33 protein 5 274 4.6E-87 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 PIRSF PIRSF005261 1 285 3.0E-74 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 SUPERFAMILY SSF64397 4 233 6.93E-77 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:1.10.287.480 179 226 3.2E-26 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 PANTHER PTHR30111:SF1 1 289 1.7E-92 T 22-04-2016 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 285 32.367 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:3.90.1280.10 227 283 1.8E-23 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 SUPERFAMILY SSF118352 226 283 1.7E-19 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YPTB_RS20335 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:3.55.30.10 2 177 3.3E-67 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 Gene3D G3DSA:3.40.50.720 118 286 3.8E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 SUPERFAMILY SSF52283 5 137 9.14E-31 T 22-04-2016 YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 SUPERFAMILY SSF51735 103 284 2.76E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 314 1.7E-25 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 283 1.1E-48 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 Gene3D G3DSA:3.40.50.720 7 117 1.2E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 PANTHER PTHR10996 1 314 6.4E-139 T 22-04-2016 YPTB_RS13935 005c4b43998bee6b61f27528904e7c35 316 PANTHER PTHR10996:SF152 1 314 6.4E-139 T 22-04-2016 YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 Gene3D G3DSA:3.30.465.10 411 508 2.2E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 Pfam PF03471 Transporter associated domain 431 508 5.0E-17 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 PANTHER PTHR22777:SF15 1 514 0.0 T 22-04-2016 YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 SUPERFAMILY SSF54631 285 419 3.79E-24 T 22-04-2016 YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 SMART SM01091 428 509 6.0E-21 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 Gene3D G3DSA:3.10.580.10 284 410 3.5E-15 T 22-04-2016 YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 Pfam PF03741 Integral membrane protein TerC family 14 203 1.0E-48 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 Pfam PF00571 CBS domain 365 416 1.3E-5 T 22-04-2016 IPR000644 CBS domain YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 SUPERFAMILY SSF56176 430 512 1.04E-17 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS09015 9777c5404470ab0a0c1d8f65cc3478af 514 PANTHER PTHR22777 1 514 0.0 T 22-04-2016 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 Pfam PF03466 LysR substrate binding domain 91 292 1.0E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 PANTHER PTHR30537 1 305 7.1E-161 T 22-04-2016 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:1.10.10.10 2 88 1.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:3.40.190.10 180 258 2.7E-16 T 22-04-2016 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 SUPERFAMILY SSF53850 93 296 2.33E-40 T 22-04-2016 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 SUPERFAMILY SSF46785 3 87 3.59E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:3.40.190.10 94 179 1.8E-34 T 22-04-2016 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS16330 1c3afa085b9c4af09502a412da9e8580 305 PANTHER PTHR30537:SF26 1 305 7.1E-161 T 22-04-2016 YPTB_RS06500 79e6fc2569b65c3f3fdf817041b3441b 272 PANTHER PTHR10794 44 272 1.1E-139 T 22-04-2016 YPTB_RS06500 79e6fc2569b65c3f3fdf817041b3441b 272 Pfam PF02517 CAAX protease self-immunity 172 259 2.1E-14 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 YPTB_RS06500 79e6fc2569b65c3f3fdf817041b3441b 272 PANTHER PTHR10794:SF54 44 272 1.1E-139 T 22-04-2016 YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 PIRSF PIRSF002211 1 59 2.9E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 Gene3D G3DSA:3.30.1390.20 2 59 2.4E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 8.7E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.06 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 SUPERFAMILY SSF55129 3 59 1.7E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.5E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 PANTHER PTHR15892 1 59 8.1E-29 T 22-04-2016 YPTB_RS19925 58c42f57a3daae6651d63045c445eb25 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site YPTB_RS17295 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 38.145 T 22-04-2016 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 YPTB_RS17295 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 PANTHER PTHR30086 1 201 2.1E-98 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS17295 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 Pfam PF01810 LysE type translocator 14 202 3.5E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS17295 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 7.5E-66 T 22-04-2016 IPR004777 L-lysine exporter/arginine exporter GO:0016021 YPTB_RS17295 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 PANTHER PTHR30086:SF0 1 201 2.1E-98 T 22-04-2016 YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 SUPERFAMILY SSF53335 17 265 4.78E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 7.1E-89 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 Gene3D G3DSA:3.40.50.150 6 197 5.1E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 SMART SM00650 25 198 8.4E-83 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 Gene3D G3DSA:1.10.8.100 201 265 8.0E-24 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 PANTHER PTHR11727 1 267 7.5E-99 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 2.3E-79 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPTB_RS03555 6a208bce41b6e3569c3198205c2ec429 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 56.043 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YPTB_RS20110 757540c2c3eddba9648cd63f666ce079 329 PANTHER PTHR22916:SF17 1 314 3.1E-106 T 22-04-2016 YPTB_RS20110 757540c2c3eddba9648cd63f666ce079 329 PANTHER PTHR22916 1 314 3.1E-106 T 22-04-2016 YPTB_RS20110 757540c2c3eddba9648cd63f666ce079 329 SUPERFAMILY SSF53448 6 232 4.36E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS20110 757540c2c3eddba9648cd63f666ce079 329 Gene3D G3DSA:3.90.550.10 2 205 1.3E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS20110 757540c2c3eddba9648cd63f666ce079 329 Pfam PF00535 Glycosyl transferase family 2 7 134 7.6E-30 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPTB_RS16015 5bd36345732a24a649c39a676ca7cf0f 316 PANTHER PTHR10587 16 308 2.2E-143 T 22-04-2016 YPTB_RS16015 5bd36345732a24a649c39a676ca7cf0f 316 PANTHER PTHR10587:SF72 16 308 2.2E-143 T 22-04-2016 YPTB_RS16015 5bd36345732a24a649c39a676ca7cf0f 316 Gene3D G3DSA:3.20.20.370 9 310 2.8E-99 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS16015 5bd36345732a24a649c39a676ca7cf0f 316 SUPERFAMILY SSF88713 9 310 3.06E-85 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS16015 5bd36345732a24a649c39a676ca7cf0f 316 Pfam PF01522 Polysaccharide deacetylase 81 167 5.5E-8 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS16015 5bd36345732a24a649c39a676ca7cf0f 316 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 10 309 9.1E-155 T 22-04-2016 IPR017625 Putative urate catabolism protein YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Pfam PF01476 LysM domain 593 635 7.4E-13 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Pfam PF01476 LysM domain 527 569 1.5E-10 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Gene3D G3DSA:3.40.630.40 241 338 1.9E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Gene3D G3DSA:3.40.630.40 390 465 1.9E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 SMART SM00257 592 635 2.7E-16 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 SMART SM00257 526 569 3.4E-12 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 SUPERFAMILY SSF54106 526 569 3.66E-10 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Gene3D G3DSA:3.10.350.10 524 570 2.3E-15 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Gene3D G3DSA:3.10.350.10 592 636 4.9E-17 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 PANTHER PTHR30404:SF1 44 211 9.6E-258 T 22-04-2016 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 PANTHER PTHR30404:SF1 230 495 9.6E-258 T 22-04-2016 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 SUPERFAMILY SSF54106 592 635 6.8E-11 T 22-04-2016 IPR018392 LysM domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 PANTHER PTHR30404 44 211 9.6E-258 T 22-04-2016 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 PANTHER PTHR30404 230 495 9.6E-258 T 22-04-2016 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Pfam PF11741 AMIN domain 71 163 1.8E-7 T 22-04-2016 IPR021731 AMIN domain YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 SUPERFAMILY SSF53187 389 465 3.77E-52 T 22-04-2016 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 SUPERFAMILY SSF53187 241 337 3.77E-52 T 22-04-2016 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 SMART SM00646 303 462 6.7E-73 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS02445 e5f241ab71fbf41ff2c9c73e948aa7b4 637 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 243 462 1.7E-48 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 3.2E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 3.2E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 3.2E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 3.2E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 3.2E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 3.2E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 3.2E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 SUPERFAMILY SSF55729 1 209 2.23E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 22-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 Pfam PF00765 Autoinducer synthase 8 188 2.7E-82 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 Gene3D G3DSA:3.40.630.30 1 210 1.2E-58 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PANTHER PTHR39322:SF1 2 214 3.9E-126 T 22-04-2016 YPTB_RS13575 b061aa484e6368be2b5210ac3c00da12 214 PANTHER PTHR39322 2 214 3.9E-126 T 22-04-2016 YPTB_RS06985 ca6618d5f9acc0ea151c5e93e3e44902 388 PANTHER PTHR22935 1 385 3.9E-83 T 22-04-2016 YPTB_RS06985 ca6618d5f9acc0ea151c5e93e3e44902 388 Gene3D G3DSA:3.40.710.10 37 380 3.9E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS06985 ca6618d5f9acc0ea151c5e93e3e44902 388 Pfam PF00144 Beta-lactamase 50 367 1.1E-61 T 22-04-2016 IPR001466 Beta-lactamase-related YPTB_RS06985 ca6618d5f9acc0ea151c5e93e3e44902 388 SUPERFAMILY SSF56601 43 367 1.23E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS06985 ca6618d5f9acc0ea151c5e93e3e44902 388 PANTHER PTHR22935:SF77 1 385 3.9E-83 T 22-04-2016 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 Pfam PF00884 Sulfatase 34 384 1.8E-73 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 PANTHER PTHR10342:SF198 8 47 6.3E-160 T 22-04-2016 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 PANTHER PTHR10342:SF198 84 535 6.3E-160 T 22-04-2016 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 ProSitePatterns PS00149 Sulfatases signature 2. 151 161 - T 22-04-2016 IPR024607 Sulfatase, conserved site YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 Gene3D G3DSA:3.30.1120.10 458 524 1.5E-22 T 22-04-2016 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 Gene3D G3DSA:3.30.1120.10 407 419 1.5E-22 T 22-04-2016 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 Gene3D G3DSA:3.40.720.10 31 406 8.6E-96 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 SUPERFAMILY SSF53649 32 58 7.56E-108 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 SUPERFAMILY SSF53649 85 519 7.56E-108 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 PANTHER PTHR10342 8 47 6.3E-160 T 22-04-2016 YPTB_RS16700 26c68ed2471658b12182c6a320d90c91 535 PANTHER PTHR10342 84 535 6.3E-160 T 22-04-2016 YPTB_RS04285 95852ba68db050b5e226a97988b45328 162 PANTHER PTHR32125 1 161 3.1E-60 T 22-04-2016 YPTB_RS04285 95852ba68db050b5e226a97988b45328 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 158 36.623 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04285 95852ba68db050b5e226a97988b45328 162 Gene3D G3DSA:3.30.1330.50 1 159 5.8E-73 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04285 95852ba68db050b5e226a97988b45328 162 Pfam PF02542 YgbB family 1 156 4.6E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04285 95852ba68db050b5e226a97988b45328 162 SUPERFAMILY SSF69765 1 158 2.49E-64 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04285 95852ba68db050b5e226a97988b45328 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04285 95852ba68db050b5e226a97988b45328 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 157 1.6E-69 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 ProSitePatterns PS00080 Multicopper oxidases signature 2. 514 525 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 PANTHER PTHR11709 392 531 5.6E-127 T 22-04-2016 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 PANTHER PTHR11709 65 340 5.6E-127 T 22-04-2016 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 SUPERFAMILY SSF49503 17 169 1.42E-28 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 PANTHER PTHR11709:SF2 392 531 5.6E-127 T 22-04-2016 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 PANTHER PTHR11709:SF2 65 340 5.6E-127 T 22-04-2016 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 SUPERFAMILY SSF49503 414 531 5.05E-27 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 Gene3D G3DSA:2.60.40.420 383 531 1.7E-31 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 Gene3D G3DSA:2.60.40.420 172 306 1.0E-31 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 4.7E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 SUPERFAMILY SSF49503 172 291 1.36E-32 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 Gene3D G3DSA:2.60.40.420 33 171 1.1E-34 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 Pfam PF07731 Multicopper oxidase 416 532 8.2E-25 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 Pfam PF07732 Multicopper oxidase 53 166 5.8E-32 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 YPTB_RS04035 9e72b094dc28d7f6e7cc1c4f51ceb737 533 Pfam PF00394 Multicopper oxidase 204 290 1.4E-6 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.70.980 135 205 4.8E-25 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 PANTHER PTHR12532 1 241 3.1E-118 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.727 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 SUPERFAMILY SSF75625 3 245 1.83E-94 T 22-04-2016 IPR029072 YebC-like YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 Pfam PF01709 Transcriptional regulator 5 236 8.7E-90 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.1270.10 212 246 7.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.1270.10 82 134 7.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:1.10.10.200 1 80 1.3E-34 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like YPTB_RS11175 db09a41db33003d05024a6b86ffa7074 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.2E-103 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPTB_RS19975 1810ac9ab15ee2565f51d440023e927c 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.0E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19975 1810ac9ab15ee2565f51d440023e927c 63 SUPERFAMILY SSF46561 1 61 1.57E-21 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19975 1810ac9ab15ee2565f51d440023e927c 63 PANTHER PTHR10916 1 63 1.4E-29 T 22-04-2016 YPTB_RS19975 1810ac9ab15ee2565f51d440023e927c 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.9E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19975 1810ac9ab15ee2565f51d440023e927c 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19975 1810ac9ab15ee2565f51d440023e927c 63 Gene3D G3DSA:1.10.287.310 1 60 1.7E-27 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19975 1810ac9ab15ee2565f51d440023e927c 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.616 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 PANTHER PTHR30181 2 377 1.9E-192 T 22-04-2016 YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 Pfam PF00381 PTS HPr component phosphorylation site 287 369 2.2E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 3.2E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 Gene3D G3DSA:3.40.930.10 4 141 2.8E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 Gene3D G3DSA:3.40.930.10 150 278 1.0E-9 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 SUPERFAMILY SSF55804 148 276 2.27E-14 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.3E-29 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 PANTHER PTHR30181:SF3 2 377 1.9E-192 T 22-04-2016 YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 SUPERFAMILY SSF55804 2 140 5.36E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 Gene3D G3DSA:3.30.1340.10 287 374 1.7E-29 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS07350 0b5cadbbbd9b1351177a503137a998cb 377 SUPERFAMILY SSF55594 286 374 3.93E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS05670 24d9087d538fa2ca68a254d888093b5d 211 PANTHER PTHR30383:SF5 26 204 1.6E-45 T 22-04-2016 YPTB_RS05670 24d9087d538fa2ca68a254d888093b5d 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 190 3.2E-24 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YPTB_RS05670 24d9087d538fa2ca68a254d888093b5d 211 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 YPTB_RS05670 24d9087d538fa2ca68a254d888093b5d 211 SUPERFAMILY SSF52266 29 206 9.58E-50 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YPTB_RS05670 24d9087d538fa2ca68a254d888093b5d 211 PANTHER PTHR30383 26 204 1.6E-45 T 22-04-2016 YPTB_RS05670 24d9087d538fa2ca68a254d888093b5d 211 Gene3D G3DSA:3.40.50.1110 28 206 1.8E-54 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YPTB_RS16190 89e2bb4a240f157a1d04fbd38e1cd106 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 15 391 1.4E-171 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YPTB_RS16190 89e2bb4a240f157a1d04fbd38e1cd106 394 Pfam PF02684 Lipid-A-disaccharide synthetase 20 388 3.5E-142 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YPTB_RS16190 89e2bb4a240f157a1d04fbd38e1cd106 394 SUPERFAMILY SSF53756 20 357 1.75E-24 T 22-04-2016 YPTB_RS16190 89e2bb4a240f157a1d04fbd38e1cd106 394 PANTHER PTHR30372:SF0 16 393 1.4E-143 T 22-04-2016 YPTB_RS16190 89e2bb4a240f157a1d04fbd38e1cd106 394 PANTHER PTHR30372 16 393 1.4E-143 T 22-04-2016 YPTB_RS16190 89e2bb4a240f157a1d04fbd38e1cd106 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 17 393 42.183 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 SUPERFAMILY SSF56059 97 302 3.54E-62 T 22-04-2016 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 37.037 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 1.7E-110 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.40.50.20 3 84 1.9E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 1.3E-20 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 PIRSF PIRSF039102 41 306 2.1E-93 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 PANTHER PTHR23132 1 305 5.1E-98 T 22-04-2016 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.470.20 181 303 6.3E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.470.20 85 103 6.3E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 PANTHER PTHR23132:SF0 1 305 5.1E-98 T 22-04-2016 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 SUPERFAMILY SSF52440 3 96 2.97E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.1490.20 106 180 3.9E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03865 e77f27c48517e610b44ee7374fded134 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 1.0E-68 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 2.0E-113 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 PANTHER PTHR30153 8 468 2.8E-225 T 22-04-2016 YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 Gene3D G3DSA:3.40.50.300 188 461 4.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 1.3E-174 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF52540 201 272 5.47E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF52540 299 452 5.47E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF48024 22 133 3.53E-38 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.1E-36 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 Gene3D G3DSA:1.10.860.10 24 126 2.6E-40 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPTB_RS02175 a9065623a555437f33290757e7e0479e 468 SMART SM00382 220 426 3.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07540 8aca0780017af93c069712dfcdba6030 274 Gene3D G3DSA:1.10.3720.10 11 263 9.2E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07540 8aca0780017af93c069712dfcdba6030 274 SUPERFAMILY SSF161098 8 259 2.75E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07540 8aca0780017af93c069712dfcdba6030 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 261 6.3E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07540 8aca0780017af93c069712dfcdba6030 274 PANTHER PTHR30222:SF1 8 267 1.9E-82 T 22-04-2016 YPTB_RS07540 8aca0780017af93c069712dfcdba6030 274 PANTHER PTHR30222 8 267 1.9E-82 T 22-04-2016 YPTB_RS00195 f8a5ce43d61b02896d15f83becd20f93 188 Pfam PF04220 Der GTPase activator (YihI) 20 179 7.1E-57 T 22-04-2016 IPR007336 Der GTPase activator YPTB_RS00195 f8a5ce43d61b02896d15f83becd20f93 188 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 17.649 T 22-04-2016 IPR007336 Der GTPase activator YPTB_RS15475 7c491874a5677239767aaee98d5a7fea 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 2.3E-87 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPTB_RS15475 7c491874a5677239767aaee98d5a7fea 257 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.0E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPTB_RS15475 7c491874a5677239767aaee98d5a7fea 257 PIRSF PIRSF004808 1 246 2.7E-77 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPTB_RS15475 7c491874a5677239767aaee98d5a7fea 257 Gene3D G3DSA:3.40.1280.10 4 173 2.7E-32 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS15475 7c491874a5677239767aaee98d5a7fea 257 PANTHER PTHR12029 3 180 4.9E-50 T 22-04-2016 YPTB_RS15475 7c491874a5677239767aaee98d5a7fea 257 SUPERFAMILY SSF75217 3 170 5.95E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 SUPERFAMILY SSF53850 12 262 8.83E-66 T 22-04-2016 YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 Gene3D G3DSA:3.40.190.10 119 200 1.5E-15 T 22-04-2016 YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 Gene3D G3DSA:3.40.190.10 222 263 7.8E-40 T 22-04-2016 YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 Gene3D G3DSA:3.40.190.10 37 118 7.8E-40 T 22-04-2016 YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 SMART SM00062 40 263 3.3E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 3.3E-57 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 PANTHER PTHR18966:SF191 27 279 3.5E-100 T 22-04-2016 YPTB_RS21360 1aa4d9b77d8a19deb731db99aae4336b 284 PANTHER PTHR18966 27 279 3.5E-100 T 22-04-2016 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF46689 57 106 6.27E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 SMART SM00871 126 287 6.7E-20 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 PANTHER PTHR11019 5 112 1.8E-67 T 22-04-2016 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF46689 6 55 6.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 Pfam PF12833 Helix-turn-helix domain 27 105 1.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 PANTHER PTHR11019:SF84 5 112 1.8E-67 T 22-04-2016 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:1.10.10.60 58 119 3.3E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:3.20.80.10 124 288 5.1E-58 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF55136 123 287 2.51E-58 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 Pfam PF06445 GyrI-like small molecule binding domain 127 287 7.4E-27 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 SMART SM00342 21 104 3.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS03380 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:1.10.10.60 2 57 7.2E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 37.784 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PANTHER PTHR11482:SF5 16 419 3.6E-147 T 22-04-2016 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 Gene3D G3DSA:3.20.20.10 48 263 6.2E-62 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 275 1.4E-56 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 SUPERFAMILY SSF51419 25 277 6.94E-57 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 SUPERFAMILY SSF50621 251 419 5.44E-56 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 PANTHER PTHR11482 16 419 3.6E-147 T 22-04-2016 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 11 418 2.0E-126 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 1.2E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS16495 ebb10efc9894ea060e170e4a278d93d7 420 Gene3D G3DSA:2.40.37.10 264 419 9.6E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF00270 DEAD/DEAH box helicase 32 196 1.4E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 SMART SM00490 261 342 1.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031:SF261 7 463 1.7E-279 T 22-04-2016 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031:SF261 546 663 1.7E-279 T 22-04-2016 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF03880 DbpA RNA binding domain 503 572 1.7E-19 T 22-04-2016 IPR005580 DbpA, RNA-binding domain YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF00271 Helicase conserved C-terminal domain 234 342 1.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 574 46.61 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 Gene3D G3DSA:3.40.50.300 6 208 8.6E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031 7 463 1.7E-279 T 22-04-2016 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031 546 663 1.7E-279 T 22-04-2016 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF12343 Cold shock protein DEAD box A 591 664 1.2E-22 T 22-04-2016 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 SUPERFAMILY SSF52540 148 356 2.34E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 SMART SM00487 26 224 3.2E-64 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 Gene3D G3DSA:3.40.50.300 209 376 1.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02780 975c2c37a0e563c78469f3b6ec907661 664 SUPERFAMILY SSF52540 5 210 2.48E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 113 196 2.3E-39 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 219 556 4.5E-143 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 114 195 3.1E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 Pfam PF02378 Phosphotransferase system, EIIC 237 500 2.8E-16 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 SUPERFAMILY SSF52794 4 88 7.85E-11 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 Gene3D G3DSA:3.40.50.2300 2 88 8.6E-7 T 22-04-2016 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 PANTHER PTHR30505 14 562 1.5E-278 T 22-04-2016 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 SUPERFAMILY SSF52794 111 211 1.92E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 Gene3D G3DSA:3.40.50.2300 109 212 2.0E-41 T 22-04-2016 YPTB_RS07360 78c97a85965b5e578824bc1e83b3b008 566 PANTHER PTHR30505:SF0 14 562 1.5E-278 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Gene3D G3DSA:3.30.565.10 500 673 2.5E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 SUPERFAMILY SSF52172 804 921 4.7E-38 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 649 5.2E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 668 5.2E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 624 5.2E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 610 5.2E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Pfam PF00072 Response regulator receiver domain 806 915 2.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 SUPERFAMILY SSF55874 502 673 1.96E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 669 2.6E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 688 777 3.5E-31 T 22-04-2016 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Gene3D G3DSA:1.10.287.130 452 499 2.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 SUPERFAMILY SSF52172 681 794 7.95E-40 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 512 8.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Gene3D G3DSA:3.40.50.2300 801 920 2.1E-39 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 SMART SM00448 804 915 3.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Gene3D G3DSA:3.30.450.20 406 451 5.8E-6 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 SMART SM00388 448 513 3.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 SUPERFAMILY SSF47384 432 514 2.75E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 1 920 27.197 T 22-04-2016 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PANTHER PTHR24423:SF382 731 926 5.0E-282 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PANTHER PTHR24423:SF382 17 60 5.0E-282 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PANTHER PTHR24423:SF382 334 674 5.0E-282 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PANTHER PTHR24423 731 926 5.0E-282 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PANTHER PTHR24423 17 60 5.0E-282 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 PANTHER PTHR24423 334 674 5.0E-282 T 22-04-2016 YPTB_RS06945 8570c675bce403df7675b3746e1d0556 926 SMART SM00387 560 671 9.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 Gene3D G3DSA:2.40.50.230 390 470 3.6E-25 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 754 2.7E-51 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 515 2.5E-71 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 Pfam PF05954 Phage late control gene D protein (GPD) 34 353 1.4E-62 T 22-04-2016 YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 Gene3D G3DSA:4.10.180.10 297 312 3.6E-7 T 22-04-2016 IPR027440 Capsid protein alpha-like domain YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 SUPERFAMILY SSF69279 204 383 2.38E-48 T 22-04-2016 YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 6.7E-182 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 SUPERFAMILY SSF69279 23 203 2.78E-48 T 22-04-2016 YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 4.4E-35 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 Gene3D G3DSA:3.55.50.10 112 205 5.8E-29 T 22-04-2016 YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 PANTHER PTHR32305:SF7 31 826 0.0 T 22-04-2016 YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 PANTHER PTHR32305 31 826 0.0 T 22-04-2016 YPTB_RS08225 98bcadeea1483bc7f190736d74b4e8b2 900 SUPERFAMILY SSF69255 382 471 1.36E-25 T 22-04-2016 YPTB_RS14325 10ff0c94b2b06b8644d2573e6eb4bd81 188 PANTHER PTHR10681:SF107 4 185 3.7E-87 T 22-04-2016 YPTB_RS14325 10ff0c94b2b06b8644d2573e6eb4bd81 188 Gene3D G3DSA:3.40.30.10 15 183 2.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS14325 10ff0c94b2b06b8644d2573e6eb4bd81 188 PANTHER PTHR10681 4 185 3.7E-87 T 22-04-2016 YPTB_RS14325 10ff0c94b2b06b8644d2573e6eb4bd81 188 SUPERFAMILY SSF52833 51 184 3.25E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS14325 10ff0c94b2b06b8644d2573e6eb4bd81 188 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPTB_RS14325 10ff0c94b2b06b8644d2573e6eb4bd81 188 Pfam PF08534 Redoxin 47 169 1.0E-24 T 22-04-2016 IPR013740 Redoxin GO:0016491 YPTB_RS14325 10ff0c94b2b06b8644d2573e6eb4bd81 188 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 11 183 2.4E-75 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Gene3D G3DSA:1.10.150.20 119 203 1.3E-27 T 22-04-2016 YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 PANTHER PTHR36121:SF1 2 211 4.4E-59 T 22-04-2016 YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Pfam PF04994 TfoX C-terminal domain 119 196 7.6E-23 T 22-04-2016 IPR007077 TfoX, C-terminal YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 PIRSF PIRSF028788 1 205 5.7E-61 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 SUPERFAMILY SSF159894 16 106 1.12E-27 T 22-04-2016 YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Gene3D G3DSA:3.30.1460.30 4 107 1.5E-34 T 22-04-2016 IPR007076 TfoX, N-terminal YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Pfam PF04993 TfoX N-terminal domain 18 105 1.6E-26 T 22-04-2016 IPR007076 TfoX, N-terminal YPTB_RS08025 53a26ea85d5d8f9a5d6b14ed66f214f0 211 PANTHER PTHR36121 2 211 4.4E-59 T 22-04-2016 YPTB_RS00300 d432d1fea33d6e4e5300c080fb7696a1 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 7.2E-44 T 22-04-2016 IPR013527 YicC-like, N-terminal YPTB_RS00300 d432d1fea33d6e4e5300c080fb7696a1 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.5E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 YPTB_RS00300 d432d1fea33d6e4e5300c080fb7696a1 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.9E-130 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 YPTB_RS00300 d432d1fea33d6e4e5300c080fb7696a1 287 PANTHER PTHR30636 1 287 4.3E-114 T 22-04-2016 YPTB_RS19040 5b93e21ef84f78f4a542f23940c093d2 185 PANTHER PTHR33371 1 159 2.7E-48 T 22-04-2016 YPTB_RS19040 5b93e21ef84f78f4a542f23940c093d2 185 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 3.4E-54 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 YPTB_RS19040 5b93e21ef84f78f4a542f23940c093d2 185 Pfam PF02470 MlaD protein 39 116 2.5E-18 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS06195 5c264bfb27eb80a465d0d6df5313be8e 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.253 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPTB_RS06195 5c264bfb27eb80a465d0d6df5313be8e 266 SUPERFAMILY SSF100950 1 263 1.34E-103 T 22-04-2016 YPTB_RS06195 5c264bfb27eb80a465d0d6df5313be8e 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.7E-138 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPTB_RS06195 5c264bfb27eb80a465d0d6df5313be8e 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 3.3E-21 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 YPTB_RS06195 5c264bfb27eb80a465d0d6df5313be8e 266 PANTHER PTHR11280 1 262 1.4E-177 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPTB_RS06195 5c264bfb27eb80a465d0d6df5313be8e 266 Gene3D G3DSA:3.40.50.1360 1 264 8.9E-111 T 22-04-2016 YPTB_RS06195 5c264bfb27eb80a465d0d6df5313be8e 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 330 5.7E-177 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 PANTHER PTHR30447 1 336 3.2E-181 T 22-04-2016 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 Gene3D G3DSA:3.30.540.10 1 171 3.4E-68 T 22-04-2016 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 Gene3D G3DSA:3.30.540.10 172 328 5.5E-47 T 22-04-2016 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 PIRSF PIRSF004532 1 332 3.3E-139 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 PANTHER PTHR30447:SF0 1 336 3.2E-181 T 22-04-2016 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 2.0E-131 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YPTB_RS00525 c841e9f81c51fa924a0b824a8e2b65d4 336 SUPERFAMILY SSF56655 1 325 3.54E-108 T 22-04-2016 YPTB_RS09490 019b262afd1c7f95fb38ee5dcfda94c6 374 Gene3D G3DSA:2.60.40.420 20 116 4.2E-5 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS09490 019b262afd1c7f95fb38ee5dcfda94c6 374 PANTHER PTHR39192 1 374 1.3E-173 T 22-04-2016 YPTB_RS09490 019b262afd1c7f95fb38ee5dcfda94c6 374 Pfam PF09375 Imelysin 135 367 1.3E-45 T 22-04-2016 YPTB_RS09490 019b262afd1c7f95fb38ee5dcfda94c6 374 SUPERFAMILY SSF49503 18 116 1.99E-6 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS09490 019b262afd1c7f95fb38ee5dcfda94c6 374 Pfam PF13473 Cupredoxin-like domain 13 116 3.2E-24 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82693 135 182 1.74E-28 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82693 274 330 1.74E-28 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 Gene3D G3DSA:3.30.2090.10 723 811 6.8E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 Gene3D G3DSA:1.10.3850.10 278 498 1.8E-62 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 Gene3D G3DSA:1.10.3850.10 816 1030 7.9E-56 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1043 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82714 182 272 2.09E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82714 724 811 1.31E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82866 296 497 4.97E-49 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PANTHER PTHR32063:SF13 1 1043 0.0 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 Gene3D G3DSA:3.30.70.1430 568 670 4.7E-40 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82693 38 132 8.11E-27 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 Gene3D G3DSA:3.30.70.1430 38 139 2.3E-35 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PANTHER PTHR32063 1 1043 0.0 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82866 807 1032 2.09E-44 T 22-04-2016 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 Gene3D G3DSA:3.30.2090.10 181 275 1.2E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS05435 4593dcff35ca668a589da4554277ccaa 1050 SUPERFAMILY SSF82693 566 670 1.15E-32 T 22-04-2016 YPTB_RS08060 f0a2e8c2a013d6f736753e664607add6 105 PANTHER PTHR31350 1 90 4.0E-42 T 22-04-2016 YPTB_RS08060 f0a2e8c2a013d6f736753e664607add6 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 2.6E-19 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPTB_RS08060 f0a2e8c2a013d6f736753e664607add6 105 SUPERFAMILY SSF141255 4 96 6.02E-30 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPTB_RS08060 f0a2e8c2a013d6f736753e664607add6 105 SMART SM00992 3 102 4.5E-36 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPTB_RS08060 f0a2e8c2a013d6f736753e664607add6 105 PANTHER PTHR31350:SF6 1 90 4.0E-42 T 22-04-2016 YPTB_RS08060 f0a2e8c2a013d6f736753e664607add6 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 36.691 T 22-04-2016 IPR022866 Heat shock protein HspQ YPTB_RS08060 f0a2e8c2a013d6f736753e664607add6 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 101 6.1E-32 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 SUPERFAMILY SSF50249 637 722 9.7E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 SUPERFAMILY SSF158832 3 321 1.96E-118 T 22-04-2016 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Gene3D G3DSA:1.10.10.650 2 109 6.6E-44 T 22-04-2016 IPR023319 Tex-like protein, HTH domain YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 SMART SM00732 326 423 1.5E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.1E-28 T 22-04-2016 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 PANTHER PTHR10724:SF1 1 747 0.0 T 22-04-2016 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 PANTHER PTHR10724 1 747 0.0 T 22-04-2016 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Gene3D G3DSA:2.40.50.140 632 719 8.3E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 SUPERFAMILY SSF53098 322 468 3.29E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 SUPERFAMILY SSF47781 559 631 2.45E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Gene3D G3DSA:3.30.420.140 327 449 7.6E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Pfam PF00575 S1 RNA binding domain 649 719 3.7E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Pfam PF16921 Tex protein YqgF-like domain 327 450 3.5E-49 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 SUPERFAMILY SSF47781 469 557 9.12E-29 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.5E-68 T 22-04-2016 IPR018974 Tex-like protein, N-terminal YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 SMART SM00316 648 719 1.2E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Gene3D G3DSA:1.10.150.310 498 629 3.9E-48 T 22-04-2016 IPR023097 Tex RuvX-like domain YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Gene3D G3DSA:1.10.3500.10 110 322 3.8E-104 T 22-04-2016 IPR023323 Tex-like domain YPTB_RS20360 dc9fb13afd7b129d11ffe399eae42cc2 791 Gene3D G3DSA:1.10.3500.10 450 497 3.8E-104 T 22-04-2016 IPR023323 Tex-like domain YPTB_RS12010 98d441d40675b60dfd9c19a3a9ab831d 392 PANTHER PTHR11751 5 389 1.2E-124 T 22-04-2016 YPTB_RS12010 98d441d40675b60dfd9c19a3a9ab831d 392 Gene3D G3DSA:3.40.640.10 47 255 2.0E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS12010 98d441d40675b60dfd9c19a3a9ab831d 392 Pfam PF00155 Aminotransferase class I and II 46 386 1.1E-41 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS12010 98d441d40675b60dfd9c19a3a9ab831d 392 PANTHER PTHR11751:SF21 5 389 1.2E-124 T 22-04-2016 YPTB_RS12010 98d441d40675b60dfd9c19a3a9ab831d 392 SUPERFAMILY SSF53383 5 390 2.24E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS12010 98d441d40675b60dfd9c19a3a9ab831d 392 Gene3D G3DSA:3.90.1150.10 256 390 7.4E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS12010 98d441d40675b60dfd9c19a3a9ab831d 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 389 3.3E-127 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 SUPERFAMILY SSF53187 179 496 4.71E-125 T 22-04-2016 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.9E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 PANTHER PTHR11963:SF13 7 503 2.6E-269 T 22-04-2016 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.266 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 SUPERFAMILY SSF52949 1 184 4.06E-52 T 22-04-2016 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 PANTHER PTHR11963 7 503 2.6E-269 T 22-04-2016 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 Gene3D G3DSA:3.40.220.10 1 161 2.3E-66 T 22-04-2016 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 Gene3D G3DSA:3.40.630.10 171 496 6.1E-137 T 22-04-2016 YPTB_RS03015 7ad71a1f2c030b9dfec2d874630aa917 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 8.9E-118 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPTB_RS12510 946e7670d043a1772f20ab79633cbb56 116 Pfam PF00462 Glutaredoxin 16 80 9.0E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPTB_RS12510 946e7670d043a1772f20ab79633cbb56 116 Gene3D G3DSA:3.40.30.10 7 101 2.4E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS12510 946e7670d043a1772f20ab79633cbb56 116 SUPERFAMILY SSF52833 2 101 1.15E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS12510 946e7670d043a1772f20ab79633cbb56 116 PIRSF PIRSF005894 1 107 4.8E-52 T 22-04-2016 IPR014434 Monothiol glutaredoxin YPTB_RS12510 946e7670d043a1772f20ab79633cbb56 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 3.8E-47 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related YPTB_RS12510 946e7670d043a1772f20ab79633cbb56 116 PANTHER PTHR10293 1 116 2.0E-61 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related YPTB_RS01040 10b058631ec3a3f651cd1198778c708f 355 Gene3D G3DSA:3.40.50.720 2 192 1.1E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01040 10b058631ec3a3f651cd1198778c708f 355 PANTHER PTHR10366 3 354 1.8E-184 T 22-04-2016 YPTB_RS01040 10b058631ec3a3f651cd1198778c708f 355 SUPERFAMILY SSF51735 3 339 2.49E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01040 10b058631ec3a3f651cd1198778c708f 355 PANTHER PTHR10366:SF41 3 354 1.8E-184 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPTB_RS01040 10b058631ec3a3f651cd1198778c708f 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 5.7E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01040 10b058631ec3a3f651cd1198778c708f 355 Gene3D G3DSA:3.90.25.10 193 341 2.5E-56 T 22-04-2016 YPTB_RS01040 10b058631ec3a3f651cd1198778c708f 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 3.1E-159 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 PIRSF PIRSF000460 2 801 6.3E-209 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 12 798 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 PANTHER PTHR11468:SF10 1 797 0.0 T 22-04-2016 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 Gene3D G3DSA:3.40.50.2000 7 467 2.7E-178 T 22-04-2016 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 PANTHER PTHR11468 1 797 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 Pfam PF00343 Carbohydrate phosphorylase 94 798 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 SUPERFAMILY SSF53756 7 799 1.36E-293 T 22-04-2016 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 Gene3D G3DSA:3.40.50.2000 468 784 1.8E-137 T 22-04-2016 YPTB_RS20410 ab445a47fa80330812f6483aeda020f0 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20815 1087286d13d6c16aa0828d938bd2ec91 467 PANTHER PTHR11785:SF351 1 465 9.4E-290 T 22-04-2016 YPTB_RS20815 1087286d13d6c16aa0828d938bd2ec91 467 PANTHER PTHR11785 1 465 9.4E-290 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS20815 1087286d13d6c16aa0828d938bd2ec91 467 PIRSF PIRSF006060 1 466 7.7E-73 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS20815 1087286d13d6c16aa0828d938bd2ec91 467 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS20815 1087286d13d6c16aa0828d938bd2ec91 467 Pfam PF00324 Amino acid permease 16 451 1.5E-107 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 Gene3D G3DSA:3.40.50.1380 5 190 8.7E-86 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.809 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 SMART SM00798 137 461 2.2E-218 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 2.9E-263 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 PIRSF PIRSF000414 1 529 1.2E-227 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 Gene3D G3DSA:3.40.140.20 253 372 1.8E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 Gene3D G3DSA:3.40.140.20 377 519 1.5E-59 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 SMART SM00851 19 132 7.0E-62 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 SUPERFAMILY SSF53927 221 529 7.62E-130 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 1.8E-120 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 Pfam PF02142 MGS-like domain 19 132 2.9E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 SUPERFAMILY SSF52335 7 196 1.57E-71 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS01775 55e38a80bf8477d5cbea577f8fe3f1b8 529 PANTHER PTHR11692 5 529 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 Gene3D G3DSA:2.40.50.140 4 67 1.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 SUPERFAMILY SSF50249 3 68 2.06E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.7E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 PANTHER PTHR11544:SF53 1 69 1.3E-48 T 22-04-2016 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 SMART SM00357 5 69 8.3E-32 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 PIRSF PIRSF002599 1 69 5.3E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS08960 2455053a6906736a69ca40bce64bc56b 69 PANTHER PTHR11544 1 69 1.3E-48 T 22-04-2016 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 2.8E-15 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 SMART SM00535 21 149 8.4E-55 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 SUPERFAMILY SSF54768 109 223 2.2E-27 T 22-04-2016 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 PANTHER PTHR11207 4 225 7.0E-113 T 22-04-2016 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 1.0E-73 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 Pfam PF14622 Ribonuclease-III-like 20 142 2.1E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 Gene3D G3DSA:1.10.1520.10 6 148 7.0E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 SUPERFAMILY SSF69065 5 159 4.19E-49 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 Gene3D G3DSA:3.30.160.20 153 223 9.4E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.607 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 YPTB_RS15620 8f65d371717f918390b7e9b551528998 226 SMART SM00358 156 224 1.5E-23 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPTB_RS07385 63ba9cfd49c6b68c5a81038c63b54184 823 PANTHER PTHR30451:SF9 1 823 0.0 T 22-04-2016 YPTB_RS07385 63ba9cfd49c6b68c5a81038c63b54184 823 Pfam PF13954 PapC N-terminal domain 14 159 2.7E-38 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS07385 63ba9cfd49c6b68c5a81038c63b54184 823 Pfam PF13953 PapC C-terminal domain 741 806 1.1E-24 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS07385 63ba9cfd49c6b68c5a81038c63b54184 823 PANTHER PTHR30451 1 823 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS07385 63ba9cfd49c6b68c5a81038c63b54184 823 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 288 298 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPTB_RS07385 63ba9cfd49c6b68c5a81038c63b54184 823 SUPERFAMILY SSF141729 12 136 4.45E-28 T 22-04-2016 YPTB_RS07385 63ba9cfd49c6b68c5a81038c63b54184 823 Pfam PF00577 Outer membrane usher protein 176 732 1.3E-193 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 SUPERFAMILY SSF53244 319 452 2.52E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 452 1.6E-139 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 PANTHER PTHR23135 16 454 9.1E-174 T 22-04-2016 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 Pfam PF01225 Mur ligase family, catalytic domain 28 96 9.2E-13 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 SUPERFAMILY SSF63418 1 102 1.24E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 34.192 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 Gene3D G3DSA:3.40.1390.10 1 85 1.2E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 PANTHER PTHR23135:SF3 16 454 9.1E-174 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 Gene3D G3DSA:3.90.190.20 319 455 3.6E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 397 1.8E-13 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 SUPERFAMILY SSF53623 105 316 3.92E-58 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 Gene3D G3DSA:3.40.1190.10 87 316 1.0E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03835 9cc6f404b21a13c3db603d25a6f66007 458 Pfam PF08245 Mur ligase middle domain 111 299 3.8E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.30.1490.20 141 199 4.4E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.15 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF52440 558 676 1.11E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:1.10.1030.10 400 538 1.6E-51 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Pfam PF02142 MGS-like domain 957 1041 4.5E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF52335 939 1071 1.7E-34 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PANTHER PTHR11405:SF5 1 1076 0.0 T 22-04-2016 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 PANTHER PTHR11405 1 1076 0.0 T 22-04-2016 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF48108 396 554 5.62E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF52440 1 127 5.75E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.40.50.1380 939 1072 1.4E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.30.1490.20 687 745 3.7E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.341 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF56059 128 401 2.3E-109 T 22-04-2016 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.40.50.20 539 663 3.1E-62 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SMART SM01096 424 547 2.5E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF56059 674 934 4.77E-104 T 22-04-2016 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.40.50.20 3 108 1.2E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 2.6E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.30.470.20 746 933 4.0E-80 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.30.470.20 200 399 2.8E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 SMART SM00851 956 1042 1.3E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 5.5E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS03510 507eeba121553080ab299474a8261946 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-76 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 PANTHER PTHR32089:SF35 267 613 2.7E-228 T 22-04-2016 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 SMART SM01358 39 288 2.5E-45 T 22-04-2016 IPR032255 Helical bimodular sensor domain YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 PANTHER PTHR32089 267 613 2.7E-228 T 22-04-2016 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 SMART SM00304 310 362 1.4E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 609 1.9E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 SMART SM00283 363 610 1.7E-87 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 Pfam PF16591 Helical bimodular sensor domain 57 282 1.4E-13 T 22-04-2016 IPR032255 Helical bimodular sensor domain YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 SUPERFAMILY SSF58104 330 611 1.7E-74 T 22-04-2016 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 538 567 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 Gene3D G3DSA:1.10.287.950 378 582 1.8E-62 T 22-04-2016 YPTB_RS21185 a75b9c1e6f88c964f252a37f6709ded3 649 Pfam PF00672 HAMP domain 291 359 1.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 SUPERFAMILY SSF46785 28 98 3.42E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 PANTHER PTHR11751 30 102 4.1E-23 T 22-04-2016 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 PANTHER PTHR11751 148 167 4.1E-23 T 22-04-2016 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 SMART SM00866 115 251 7.9E-38 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 4.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 4.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 93 2.0E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 SMART SM00345 32 95 2.9E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 Gene3D G3DSA:3.40.1410.10 102 255 4.6E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 Pfam PF07702 UTRA domain 115 251 2.0E-38 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 Gene3D G3DSA:1.10.10.10 29 98 2.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10485 a2d60c45eb8361b23d609e3fe6a42adb 265 SUPERFAMILY SSF64288 102 256 1.52E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 PANTHER PTHR35890:SF4 9 169 5.3E-103 T 22-04-2016 YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 PIRSF PIRSF006865 1 169 5.0E-67 T 22-04-2016 IPR005658 Proteinase inhibitor I11, ecotin YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Hamap MF_00706 Ecotin [eco]. 4 169 41.115 T 22-04-2016 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Pfam PF03974 Ecotin 36 159 1.1E-49 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Gene3D G3DSA:2.60.40.550 30 110 1.9E-37 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Gene3D G3DSA:4.10.1230.10 111 168 7.2E-28 T 22-04-2016 IPR027438 Ecotin, C-terminal YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 SUPERFAMILY SSF49772 32 167 4.45E-53 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YPTB_RS06910 4c15ee05ff015a65a21f1ceb0b17f6bb 169 PANTHER PTHR35890 9 169 5.3E-103 T 22-04-2016 YPTB_RS01425 88138ae0d62f1ab918d5a845a6b31361 249 PANTHER PTHR23344 2 242 1.2E-81 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPTB_RS01425 88138ae0d62f1ab918d5a845a6b31361 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 2.5E-39 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPTB_RS01425 88138ae0d62f1ab918d5a845a6b31361 249 Gene3D G3DSA:3.20.20.190 3 242 5.5E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS01425 88138ae0d62f1ab918d5a845a6b31361 249 SUPERFAMILY SSF51695 6 242 1.07E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS01425 88138ae0d62f1ab918d5a845a6b31361 249 PANTHER PTHR23344:SF20 2 242 1.2E-81 T 22-04-2016 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 Gene3D G3DSA:3.90.228.20 227 289 1.5E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 Gene3D G3DSA:3.90.228.20 350 538 1.5E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 1.3E-285 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 SUPERFAMILY SSF68923 8 226 3.66E-91 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 PIRSF PIRSF006294 3 539 8.4E-231 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 SUPERFAMILY SSF53795 228 539 8.47E-129 T 22-04-2016 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 PANTHER PTHR30031 7 539 0.0 T 22-04-2016 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 1.1E-210 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 537 55.319 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 PANTHER PTHR30031:SF0 7 539 0.0 T 22-04-2016 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPTB_RS20340 88dc80a06ab1f56a6294bdd2ed456089 539 Gene3D G3DSA:3.40.449.10 21 226 4.8E-88 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 Gene3D G3DSA:1.10.3090.10 201 438 3.3E-50 T 22-04-2016 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 11 464 38.635 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 36 463 2.0E-160 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 SUPERFAMILY SSF81891 199 437 1.7E-50 T 22-04-2016 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 228 288 5.3E-20 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 SUPERFAMILY SSF81301 38 197 9.81E-41 T 22-04-2016 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 Pfam PF12626 Polymerase A arginine-rich C-terminus 346 465 4.5E-44 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 Pfam PF01743 Poly A polymerase head domain 67 201 1.1E-39 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 PANTHER PTHR13734 28 338 4.8E-139 T 22-04-2016 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 Gene3D G3DSA:3.30.460.10 49 200 2.9E-50 T 22-04-2016 YPTB_RS04085 8bf1993923f01593c16553c615a69dd6 470 PANTHER PTHR13734:SF47 28 338 4.8E-139 T 22-04-2016 YPTB_RS08660 f4c9114854feac29158652c0becc5f70 140 PANTHER PTHR33639:SF3 4 140 3.5E-93 T 22-04-2016 YPTB_RS08660 f4c9114854feac29158652c0becc5f70 140 Pfam PF04134 Protein of unknown function, DUF393 15 124 1.0E-34 T 22-04-2016 IPR007263 Protein of unknown function DUF393 YPTB_RS08660 f4c9114854feac29158652c0becc5f70 140 PANTHER PTHR33639 4 140 3.5E-93 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PANTHER PTHR32063 1 1024 0.0 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 788 833 1.52E-5 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 665 701 1.52E-5 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.2090.10 183 262 9.1E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.2090.10 703 784 1.0E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.70.1430 558 647 1.2E-13 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 40 135 1.62E-23 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:1.10.3850.10 794 1010 6.6E-53 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 555 650 1.55E-17 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82714 703 785 3.01E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82866 812 1010 9.29E-42 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82866 290 491 1.44E-46 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.70.1430 40 141 4.1E-30 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:1.20.1640.10 285 499 1.4E-56 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PANTHER PTHR32063:SF34 1 1024 0.0 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82714 183 265 1.14E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 136 182 1.39E-21 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 268 324 1.39E-21 T 22-04-2016 YPTB_RS15235 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 26.998 T 22-04-2016 IPR023931 Multidrug resistance protein MdtC YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 SUPERFAMILY SSF51126 24 323 5.65E-31 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 PRINTS PR01484 Pertactin virulence factor family signature 421 445 2.7E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 PRINTS PR01484 Pertactin virulence factor family signature 527 550 2.7E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 PRINTS PR01484 Pertactin virulence factor family signature 359 377 2.7E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 PRINTS PR01484 Pertactin virulence factor family signature 618 638 2.7E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 PRINTS PR01484 Pertactin virulence factor family signature 593 618 2.7E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 PRINTS PR01484 Pertactin virulence factor family signature 508 525 2.7E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 PANTHER PTHR35037 1 638 1.0E-148 T 22-04-2016 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 Gene3D G3DSA:2.40.128.130 339 638 4.2E-74 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 Pfam PF03212 Pertactin 203 323 2.3E-31 T 22-04-2016 IPR004899 Pertactin, central region YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 Gene3D G3DSA:2.160.20.20 42 324 3.7E-44 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 221 638 1.6E-116 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 SMART SM00869 380 627 7.2E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 Pfam PF03797 Autotransporter beta-domain 381 621 4.6E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS05850 b5970da7e48a22c07104cdebdff3c68b 638 SUPERFAMILY SSF103515 349 638 5.23E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS08050 4c6b5827ed6b591c5308d3b55b4c565f 226 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 222 26.187 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 YPTB_RS08050 4c6b5827ed6b591c5308d3b55b4c565f 226 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 219 9.0E-46 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 YPTB_RS08050 4c6b5827ed6b591c5308d3b55b4c565f 226 PANTHER PTHR38108:SF1 1 226 3.0E-82 T 22-04-2016 YPTB_RS08050 4c6b5827ed6b591c5308d3b55b4c565f 226 PANTHER PTHR38108 1 226 3.0E-82 T 22-04-2016 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 191 317 1.7E-49 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 SMART SM00771 188 318 2.5E-78 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 PANTHER PTHR38685:SF1 2 328 2.3E-106 T 22-04-2016 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 320 27.639 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 318 4.3E-83 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 PANTHER PTHR38685 2 328 2.3E-106 T 22-04-2016 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 Gene3D G3DSA:3.30.1400.10 188 321 4.8E-61 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 207 325 4.0E-65 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPTB_RS14710 5927c1a516c41360fb93996eb5e70ae8 328 SUPERFAMILY SSF64383 189 322 9.15E-49 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.3E-65 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 PANTHER PTHR30476 1 163 1.9E-95 T 22-04-2016 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.101 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 PANTHER PTHR30476:SF0 1 163 1.9E-95 T 22-04-2016 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 Gene3D G3DSA:3.30.70.990 9 97 7.2E-35 T 22-04-2016 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 SUPERFAMILY SSF89963 2 89 2.22E-30 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 Gene3D G3DSA:3.30.70.860 98 163 2.2E-35 T 22-04-2016 YPTB_RS05250 aadb9f1586c1daf1a08b52989355c525 163 SUPERFAMILY SSF89963 91 163 3.14E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 Pfam PF00691 OmpA family 67 162 7.5E-21 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 SUPERFAMILY SSF103088 56 167 5.1E-34 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 Gene3D G3DSA:3.30.1330.60 64 167 1.3E-33 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 168 7.8E-46 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 PANTHER PTHR30128 46 168 3.6E-64 T 22-04-2016 YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 PRINTS PR01021 OMPA domain signature 98 113 4.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 PRINTS PR01021 OMPA domain signature 68 90 4.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 PRINTS PR01021 OMPA domain signature 113 129 4.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS06405 9d8178f473e966de54b66cded8e89374 168 PANTHER PTHR30128:SF18 46 168 3.6E-64 T 22-04-2016 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Gene3D G3DSA:3.40.50.2300 693 800 2.9E-35 T 22-04-2016 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Pfam PF00072 Response regulator receiver domain 696 809 1.9E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PANTHER PTHR24423:SF486 376 849 1.3E-179 T 22-04-2016 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PANTHER PTHR24423:SF486 8 18 1.3E-179 T 22-04-2016 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Gene3D G3DSA:3.30.565.10 462 617 5.0E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 SUPERFAMILY SSF55874 451 614 9.95E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Gene3D G3DSA:1.10.287.130 390 458 6.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Pfam PF01627 Hpt domain 848 914 4.5E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 SMART SM00387 509 616 1.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Gene3D G3DSA:1.20.120.160 801 911 1.5E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 SMART SM00448 694 809 1.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Pfam PF00512 His Kinase A (phospho-acceptor) domain 398 462 9.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 SUPERFAMILY SSF47226 792 901 4.58E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 SMART SM00388 397 462 1.0E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 SUPERFAMILY SSF52172 693 814 4.41E-33 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PANTHER PTHR24423 376 849 1.3E-179 T 22-04-2016 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PANTHER PTHR24423 8 18 1.3E-179 T 22-04-2016 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 614 4.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS01855 15adf8eb4fbe524aec5cbc663cd52011 939 SUPERFAMILY SSF47384 383 464 2.75E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:3.40.50.300 160 342 6.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:1.10.8.60 343 428 1.2E-37 T 22-04-2016 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 SMART SM01086 766 855 2.3E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 SUPERFAMILY SSF52540 546 851 2.94E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 842 8.8E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 9.9E-57 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 SUPERFAMILY SSF81923 4 156 1.86E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:3.40.50.300 551 777 1.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:1.10.1780.10 1 148 1.7E-46 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 PANTHER PTHR11638 1 856 0.0 T 22-04-2016 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 PANTHER PTHR11638:SF18 1 856 0.0 T 22-04-2016 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 SUPERFAMILY SSF52540 159 545 1.12E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 SMART SM00382 198 344 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 SMART SM00382 597 733 5.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 4.4E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.3E-9 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:1.10.8.60 778 855 2.0E-29 T 22-04-2016 YPTB_RS04700 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 2.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 122 4.0E-60 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.81 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 PANTHER PTHR30308:SF2 1 160 2.2E-87 T 22-04-2016 YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 PANTHER PTHR30308 1 160 2.2E-87 T 22-04-2016 YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 Pfam PF01668 SmpB protein 13 75 8.2E-30 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 SUPERFAMILY SSF74982 8 138 1.7E-51 T 22-04-2016 IPR023620 Small protein B YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 Gene3D G3DSA:2.40.280.10 13 133 1.8E-51 T 22-04-2016 IPR023620 Small protein B YPTB_RS06280 50e116b31e60ef598a5f32ef8b556d7a 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.2E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 PANTHER PTHR32305 1 738 0.0 T 22-04-2016 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 519 1.9E-154 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 SUPERFAMILY SSF69255 361 447 1.12E-29 T 22-04-2016 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 17 502 3.7E-215 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 Gene3D G3DSA:3.55.50.10 95 183 7.5E-34 T 22-04-2016 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 Pfam PF05954 Phage late control gene D protein (GPD) 25 327 1.8E-71 T 22-04-2016 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 Gene3D G3DSA:2.40.50.230 367 447 5.5E-35 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 SUPERFAMILY SSF69279 190 360 1.7E-35 T 22-04-2016 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 PANTHER PTHR32305:SF10 1 738 0.0 T 22-04-2016 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 SUPERFAMILY SSF69279 14 180 4.12E-46 T 22-04-2016 YPTB_RS03630 1824fd445048e551c1cfb2ccc4bb6969 782 SUPERFAMILY SSF69349 438 536 6.75E-18 T 22-04-2016 YPTB_RS11100 6285204267e111193cebab88fec238f9 194 PANTHER PTHR13256:SF24 9 194 1.6E-89 T 22-04-2016 YPTB_RS11100 6285204267e111193cebab88fec238f9 194 Gene3D G3DSA:3.40.630.30 8 187 2.4E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS11100 6285204267e111193cebab88fec238f9 194 PANTHER PTHR13256 9 194 1.6E-89 T 22-04-2016 YPTB_RS11100 6285204267e111193cebab88fec238f9 194 SUPERFAMILY SSF55729 12 186 2.47E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS11100 6285204267e111193cebab88fec238f9 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 1.6E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS07635 3dd796abd83915c96a96afde6db6ec4f 335 PANTHER PTHR10366 2 335 6.4E-209 T 22-04-2016 YPTB_RS07635 3dd796abd83915c96a96afde6db6ec4f 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 2.2E-29 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS07635 3dd796abd83915c96a96afde6db6ec4f 335 Gene3D G3DSA:3.90.25.10 238 330 4.8E-6 T 22-04-2016 YPTB_RS07635 3dd796abd83915c96a96afde6db6ec4f 335 Gene3D G3DSA:3.40.50.720 1 237 1.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07635 3dd796abd83915c96a96afde6db6ec4f 335 SUPERFAMILY SSF51735 1 268 2.77E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07635 3dd796abd83915c96a96afde6db6ec4f 335 SUPERFAMILY SSF51735 296 332 2.77E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07635 3dd796abd83915c96a96afde6db6ec4f 335 PANTHER PTHR10366:SF409 2 335 6.4E-209 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 Gene3D G3DSA:3.40.50.300 2 168 6.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 57 65 4.0E-22 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 29 42 4.0E-22 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 5 20 4.0E-22 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 74 83 4.0E-22 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 95 112 4.0E-22 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 SUPERFAMILY SSF52540 3 169 1.26E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 Pfam PF01202 Shikimate kinase 11 168 6.4E-48 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 44.932 T 22-04-2016 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 PANTHER PTHR21087:SF9 1 173 2.7E-117 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 PANTHER PTHR21087 1 173 2.7E-117 T 22-04-2016 YPTB_RS05055 412f2d574e51bd7944014b31b2c1e0d9 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.279 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 SUPERFAMILY SSF69572 10 355 1.57E-87 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 Pfam PF00581 Rhodanese-like domain 290 379 2.8E-8 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 Gene3D G3DSA:3.40.50.720 15 255 3.3E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 PANTHER PTHR10953 4 355 2.0E-101 T 22-04-2016 YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 SMART SM00450 289 384 3.3E-11 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 PANTHER PTHR10953:SF153 4 355 2.0E-101 T 22-04-2016 YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 Pfam PF00899 ThiF family 21 253 1.1E-60 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS03175 7bbc2b8113480c1f6df7492a49a2cbc4 408 Gene3D G3DSA:3.40.250.10 288 381 6.8E-17 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS15040 8e852d8205511c02c361c5cd679e614e 225 SUPERFAMILY SSF55166 21 182 1.37E-20 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS15040 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385 5 71 1.7E-65 T 22-04-2016 YPTB_RS15040 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385 90 223 1.7E-65 T 22-04-2016 YPTB_RS15040 8e852d8205511c02c361c5cd679e614e 225 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 26 181 8.0E-38 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 YPTB_RS15040 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385:SF1 5 71 1.7E-65 T 22-04-2016 YPTB_RS15040 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385:SF1 90 223 1.7E-65 T 22-04-2016 YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 PANTHER PTHR10366:SF439 5 244 4.5E-209 T 22-04-2016 YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 PANTHER PTHR10366:SF439 265 324 4.5E-209 T 22-04-2016 YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 Pfam PF11066 Protein of unknown function (DUF2867) 340 469 1.2E-12 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 SUPERFAMILY SSF51735 1 301 2.43E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 Gene3D G3DSA:3.40.50.720 2 235 6.6E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 Pfam PF13460 NAD(P)H-binding 10 153 9.0E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 PANTHER PTHR10366 5 244 4.5E-209 T 22-04-2016 YPTB_RS07640 43a28bc1953b580726cdb0118fea9e37 496 PANTHER PTHR10366 265 324 4.5E-209 T 22-04-2016 YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PANTHER PTHR30012:SF0 5 399 1.2E-168 T 22-04-2016 YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 1.8E-27 T 22-04-2016 IPR018076 Type II secretion system F domain YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 1.4E-29 T 22-04-2016 IPR018076 Type II secretion system F domain YPTB_RS03950 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PANTHER PTHR30012 5 399 1.2E-168 T 22-04-2016 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 Gene3D G3DSA:3.40.50.620 3 157 6.1E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 SUPERFAMILY SSF52374 4 155 7.51E-44 T 22-04-2016 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 PANTHER PTHR21342 1 159 1.0E-83 T 22-04-2016 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.3E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.3E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.3E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.3E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.3E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 59 1.3E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 PANTHER PTHR21342:SF1 1 159 1.0E-83 T 22-04-2016 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.2E-58 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.495 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPTB_RS00350 c1078826bd4b3ae0e2651725af9df1ed 159 Pfam PF01467 Cytidylyltransferase-like 6 134 1.1E-22 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS09760 0858cf86ee8d7267e2599269598895e5 351 PANTHER PTHR30349 133 333 1.2E-36 T 22-04-2016 YPTB_RS09760 0858cf86ee8d7267e2599269598895e5 351 SUPERFAMILY SSF56349 64 331 5.3E-46 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS09760 0858cf86ee8d7267e2599269598895e5 351 Gene3D G3DSA:1.10.443.10 177 333 2.0E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS09760 0858cf86ee8d7267e2599269598895e5 351 PANTHER PTHR30349:SF20 133 333 1.2E-36 T 22-04-2016 YPTB_RS09760 0858cf86ee8d7267e2599269598895e5 351 Pfam PF00589 Phage integrase family 178 323 2.4E-21 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS10535 741c269dd43678d014ebd71ff90f569d 449 Pfam PF00419 Fimbrial protein 263 449 1.6E-33 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS10535 741c269dd43678d014ebd71ff90f569d 449 Gene3D G3DSA:2.60.40.1090 269 444 7.8E-4 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS10535 741c269dd43678d014ebd71ff90f569d 449 PIRSF PIRSF029766 1 449 1.2E-196 T 22-04-2016 IPR011228 Uncharacterised conserved protein UCP029766 YPTB_RS10535 741c269dd43678d014ebd71ff90f569d 449 SUPERFAMILY SSF49401 407 446 7.95E-8 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS10535 741c269dd43678d014ebd71ff90f569d 449 SUPERFAMILY SSF49401 269 377 7.95E-8 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 1.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SMART SM00304 180 232 1.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 1.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SUPERFAMILY SSF47384 232 289 2.16E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SUPERFAMILY SSF55874 292 442 6.68E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Gene3D G3DSA:1.10.287.130 228 288 1.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PANTHER PTHR24423 130 444 4.3E-56 T 22-04-2016 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SMART SM00388 233 293 2.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SMART SM00387 332 440 2.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Pfam PF00672 HAMP domain 162 225 1.3E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS20345 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Gene3D G3DSA:3.30.565.10 293 442 3.9E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20125 2e57084693774a09201c9463ee71007f 284 Gene3D G3DSA:1.10.3720.10 80 278 3.7E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20125 2e57084693774a09201c9463ee71007f 284 PANTHER PTHR30151:SF0 1 284 4.7E-135 T 22-04-2016 YPTB_RS20125 2e57084693774a09201c9463ee71007f 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 278 2.2E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20125 2e57084693774a09201c9463ee71007f 284 SUPERFAMILY SSF161098 84 266 3.27E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20125 2e57084693774a09201c9463ee71007f 284 PANTHER PTHR30151 1 284 4.7E-135 T 22-04-2016 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PANTHER PTHR30177:SF8 89 384 3.9E-194 T 22-04-2016 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 375 2.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 Gene3D G3DSA:1.10.3720.10 41 65 3.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 Gene3D G3DSA:1.10.3720.10 159 375 3.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 SUPERFAMILY SSF161098 173 371 2.49E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PANTHER PTHR30177 89 384 3.9E-194 T 22-04-2016 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 319 338 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS06845 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 PANTHER PTHR30246:SF0 1 209 5.1E-135 T 22-04-2016 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 7.5E-86 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 Gene3D G3DSA:3.20.20.70 2 210 2.7E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 SUPERFAMILY SSF51569 4 209 6.59E-70 T 22-04-2016 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 PANTHER PTHR30246 1 209 5.1E-135 T 22-04-2016 YPTB_RS11240 216e833c18a153bf35b623a3ba244453 213 Pfam PF01081 KDPG and KHG aldolase 9 203 1.6E-90 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 106.255 T 22-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 SUPERFAMILY SSF48498 83 194 3.02E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 PANTHER PTHR30055 1 196 5.4E-135 T 22-04-2016 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 Gene3D G3DSA:1.10.357.10 2 192 1.2E-49 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 5.2E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 Pfam PF13977 Bacterial transcriptional repressor 84 192 3.1E-34 T 22-04-2016 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 9.7E-80 T 22-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 SUPERFAMILY SSF46689 6 78 2.31E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06635 29924ab08b2947524e13f5bc1a84a2e6 198 PANTHER PTHR30055:SF61 1 196 5.4E-135 T 22-04-2016 YPTB_RS14140 9d393240c053809456547a73c4acba05 265 PIRSF PIRSF039085 10 265 8.5E-119 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPTB_RS14140 9d393240c053809456547a73c4acba05 265 PANTHER PTHR24220 15 265 2.7E-188 T 22-04-2016 YPTB_RS14140 9d393240c053809456547a73c4acba05 265 SMART SM00382 38 237 1.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS14140 9d393240c053809456547a73c4acba05 265 Gene3D G3DSA:3.40.50.300 14 260 5.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14140 9d393240c053809456547a73c4acba05 265 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS14140 9d393240c053809456547a73c4acba05 265 PANTHER PTHR24220:SF347 15 265 2.7E-188 T 22-04-2016 YPTB_RS14140 9d393240c053809456547a73c4acba05 265 Pfam PF00005 ABC transporter 29 189 2.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS14140 9d393240c053809456547a73c4acba05 265 SUPERFAMILY SSF52540 14 259 5.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 SMART SM00448 3 114 2.0E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 SUPERFAMILY SSF46894 130 228 1.65E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 PANTHER PTHR26402:SF573 3 228 1.6E-162 T 22-04-2016 YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 SUPERFAMILY SSF52172 2 124 3.27E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 Pfam PF00072 Response regulator receiver domain 5 114 9.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 1.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 PANTHER PTHR26402 3 228 1.6E-162 T 22-04-2016 YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 SMART SM00862 152 228 1.4E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 Gene3D G3DSA:1.10.10.10 131 228 2.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17180 795e08217e72668a060fa4088fdc87e4 232 Gene3D G3DSA:3.40.50.2300 5 123 1.8E-35 T 22-04-2016 YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM01091 205 283 1.8E-29 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 SUPERFAMILY SSF54631 66 202 3.79E-32 T 22-04-2016 YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 Gene3D G3DSA:3.30.465.10 198 283 2.2E-31 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 Gene3D G3DSA:3.10.580.10 55 197 1.7E-22 T 22-04-2016 YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF00571 CBS domain 143 189 1.1E-4 T 22-04-2016 IPR000644 CBS domain YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF00571 CBS domain 69 123 4.9E-8 T 22-04-2016 IPR000644 CBS domain YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 PANTHER PTHR22777 18 292 8.2E-129 T 22-04-2016 YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM00116 141 189 3.9 T 22-04-2016 IPR000644 CBS domain YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM00116 78 127 3.9 T 22-04-2016 IPR000644 CBS domain YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 SUPERFAMILY SSF56176 203 289 1.12E-23 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF03471 Transporter associated domain 206 281 8.3E-22 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS06110 fcac28571f59bceb9dbff9163dd502b4 292 PANTHER PTHR22777:SF17 18 292 8.2E-129 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 Gene3D G3DSA:2.170.130.10 66 180 4.7E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 6.9E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552 1 246 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552 266 470 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552 503 674 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552 705 830 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 Pfam PF00593 TonB dependent receptor 521 829 2.8E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 54 830 3.1E-167 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552:SF20 1 246 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552:SF20 266 470 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552:SF20 503 674 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 PANTHER PTHR32552:SF20 705 830 0.0 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 Gene3D G3DSA:2.40.170.20 514 830 1.8E-68 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 Gene3D G3DSA:2.40.170.20 181 463 1.8E-68 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 61 830 5.3E-121 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 SUPERFAMILY SSF56935 514 671 3.4E-84 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 SUPERFAMILY SSF56935 711 830 3.4E-84 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 SUPERFAMILY SSF56935 67 238 3.4E-84 T 22-04-2016 YPTB_RS00685 207c6470db9018092347d5b54a0ffc66 830 SUPERFAMILY SSF56935 267 476 3.4E-84 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 SUPERFAMILY SSF46785 4 56 4.71E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Gene3D G3DSA:3.90.76.10 131 266 3.6E-21 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 PANTHER PTHR30290 119 552 9.3E-216 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 PANTHER PTHR30290 22 81 9.3E-216 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 SUPERFAMILY SSF53850 117 550 1.63E-65 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 1.5E-17 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 553 69.366 T 22-04-2016 IPR023767 Transcriptional regulator SgrR YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 1.7E-42 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 PANTHER PTHR30290:SF30 119 552 9.3E-216 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 PANTHER PTHR30290:SF30 22 81 9.3E-216 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Gene3D G3DSA:3.40.190.10 267 308 1.2E-5 T 22-04-2016 YPTB_RS03725 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Gene3D G3DSA:1.10.10.10 4 56 3.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 PIRSF PIRSF000398 1 271 2.2E-62 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 PANTHER PTHR30481 2 272 1.6E-95 T 22-04-2016 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 249 8.6E-64 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 PANTHER PTHR30481:SF3 2 272 1.6E-95 T 22-04-2016 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.0E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 2.0E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 2.0E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.0E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 Gene3D G3DSA:3.40.50.150 2 59 1.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 Gene3D G3DSA:3.40.50.150 160 267 1.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 SUPERFAMILY SSF53335 6 267 6.34E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 Gene3D G3DSA:1.10.1020.10 60 156 1.7E-32 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 YPTB_RS10255 ed3b3f99d40c731de3da2c5022de4ac2 272 TIGRFAM TIGR00571 dam: DNA adenine methylase 7 267 2.2E-84 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 Gene3D G3DSA:1.10.10.10 7 76 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 SMART SM00345 17 75 5.5E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 PANTHER PTHR11751 16 101 2.9E-25 T 22-04-2016 YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 Gene3D G3DSA:1.20.120.530 78 220 6.6E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.9E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.9E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 Pfam PF07729 FCD domain 85 208 8.9E-24 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 SMART SM00895 85 209 7.4E-17 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 SUPERFAMILY SSF48008 81 217 1.86E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 SUPERFAMILY SSF46785 7 79 3.78E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19350 995138dc650ea9ea8b64872112c4245c 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 72 6.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10805 f3481205ef17312317876e257f4b6f51 539 Gene3D G3DSA:3.60.120.10 62 185 9.6E-42 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS10805 f3481205ef17312317876e257f4b6f51 539 Gene3D G3DSA:3.60.120.10 236 533 9.6E-42 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS10805 f3481205ef17312317876e257f4b6f51 539 PANTHER PTHR11236:SF17 247 531 3.8E-132 T 22-04-2016 YPTB_RS10805 f3481205ef17312317876e257f4b6f51 539 Pfam PF00425 chorismate binding enzyme 275 521 8.2E-40 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB_RS10805 f3481205ef17312317876e257f4b6f51 539 SUPERFAMILY SSF56322 262 531 1.7E-45 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS10805 f3481205ef17312317876e257f4b6f51 539 SUPERFAMILY SSF56322 27 230 1.7E-45 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS10805 f3481205ef17312317876e257f4b6f51 539 PANTHER PTHR11236 247 531 3.8E-132 T 22-04-2016 YPTB_RS00505 8bf821008795b685ed755a8dab024242 255 Gene3D G3DSA:3.20.20.70 1 251 7.8E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS00505 8bf821008795b685ed755a8dab024242 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.5E-95 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPTB_RS00505 8bf821008795b685ed755a8dab024242 255 PANTHER PTHR21139 1 255 4.2E-132 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPTB_RS00505 8bf821008795b685ed755a8dab024242 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPTB_RS00505 8bf821008795b685ed755a8dab024242 255 Pfam PF00121 Triosephosphate isomerase 5 246 4.7E-92 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPTB_RS00505 8bf821008795b685ed755a8dab024242 255 SUPERFAMILY SSF51351 1 250 2.23E-90 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPTB_RS00505 8bf821008795b685ed755a8dab024242 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.301 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1717 1811 8.04E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4224 4325 8.63E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.1080 5428 5513 6.9E-24 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1233 1327 2.55E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:3.10.100.10 5514 5622 5.4E-22 T 22-04-2016 IPR016186 C-type lectin-like YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576 2869 3621 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576 4115 5623 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576 4 636 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576 3816 3921 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2104 2198 3.53E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3361 3455 1.96E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 5124 5226 7.26E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2490 2580 1.7E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4731 4820 3.7E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3941 4030 3.9E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 550 639 2.0E-14 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3167 3257 7.7E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3554 3643 2.3E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3844 3934 3.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2587 2677 2.0E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 5330 5420 1.3E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1717 1806 5.9E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3071 3160 0.0012 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2104 2194 2.5E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4930 5019 3.5E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 746 835 0.02 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1814 1904 2.8E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1524 1612 6.1E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2878 2967 1.7E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 5232 5321 8.3E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1911 2001 2.1E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1330 1420 1.1E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3361 3451 4.1E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1233 1322 8.0E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2684 2773 1.4E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 845 934 1.6E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1427 1517 7.7E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1137 1225 6.1E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3747 3837 2.5E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 5032 5120 3.7E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4231 4320 1.1E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2974 3064 1.2E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2298 2387 3.9E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1040 1130 1.7E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3650 3740 3.7E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 5132 5221 0.071 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4133 4223 0.0014 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3458 3547 4.1E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 650 739 1.1E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 1620 1709 8.0E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 3264 3354 4.5E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4037 4125 1.3E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4431 4518 1.6E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4631 4720 1.2E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4329 4418 4.9E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2394 2482 1.2E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4531 4620 6.4E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 4829 4918 3.1E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 943 1033 1.9E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2781 2871 1.4E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2008 2097 3.6E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00634 2201 2291 3.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4037 4130 4.51E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3070 3162 1.53E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2974 3068 2.16E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3554 3647 2.16E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4933 5026 5.69E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 837 939 1.02E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3941 4034 1.33E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF01476 LysM domain 91 138 2.5E-5 T 22-04-2016 IPR018392 LysM domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4723 4816 4.45E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 5022 5111 1.08E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 5224 5326 5.49E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 743 825 1.49E-13 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4830 4923 5.89E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3650 3744 2.55E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 945 1037 9.22E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 550 643 3.14E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 652 742 1.12E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1040 1134 1.53E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 5329 5422 1.69E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4521 4622 1.61E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3264 3358 3.2E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2490 2584 9.7E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 840 939 3.9E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4422 4523 2.3E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2008 2099 5.1E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1524 1615 4.3E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2104 2196 1.1E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2878 2971 9.6E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3747 3839 1.2E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1233 1325 3.6E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3554 3647 2.3E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2587 2681 1.7E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1330 1424 3.9E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1040 1134 7.5E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1427 1521 4.1E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1620 1712 3.5E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1911 2005 1.4E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2781 2875 5.8E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4229 4325 1.1E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 5126 5226 4.6E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3844 3938 8.4E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2684 2778 3.7E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1137 1228 4.8E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1814 1906 9.9E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 1717 1811 7.4E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 5331 5423 7.7E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2201 2295 8.7E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3458 3551 7.0E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 944 1035 1.6E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2974 3066 5.9E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4628 4725 2.3E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3650 3742 2.7E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 5030 5110 1.1E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4529 4623 1.2E-22 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3361 3455 3.2E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3071 3164 5.1E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3167 3261 6.4E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2878 2971 4.51E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4328 4421 4.1E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4134 4228 4.3E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2297 2391 5.3E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 650 743 5.5E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 745 839 2.7E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 3940 4034 5.2E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4728 4826 2.0E-16 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SMART SM00257 90 138 2.0E-6 T 22-04-2016 IPR018392 LysM domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2684 2778 2.55E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2394 2487 1.51E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1814 1908 1.86E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1911 2005 2.94E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3747 3841 3.53E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2587 2681 3.14E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 551 643 4.3E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4935 5025 6.4E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 5232 5325 6.3E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4832 4922 3.5E-16 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 2395 2486 4.8E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:2.60.40.920 4038 4129 9.2E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Gene3D G3DSA:3.10.350.10 90 126 4.9E-7 T 22-04-2016 IPR018392 LysM domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4621 4726 5.3E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2490 2584 1.53E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 5425 5506 2.79E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2201 2295 2.94E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2493 2571 3.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1914 2001 6.6E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 4438 4516 4.8E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 4931 5014 1.6E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 3750 3830 1.1E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1430 1508 3.5E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 4230 4316 1.5E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 3364 3451 8.6E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2016 2097 2.4E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 4537 4620 5.7E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1236 1319 2.7E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1623 1706 2.7E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 3170 3248 1.6E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 946 1026 2.1E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 5039 5110 3.1E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 3267 3345 6.0E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 3847 3934 3.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 3653 3740 3.3E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1720 1803 5.1E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 850 925 1.4E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2204 2291 3.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1043 1121 4.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2687 2770 2.6E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2590 2677 6.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1817 1904 1.1E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 4332 4414 1.6E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 1333 1420 5.5E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 553 640 1.1E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2977 3064 5.1E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2107 2187 1.1E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 4733 4811 2.6E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 2784 2871 1.8E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 652 738 1.1E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 5235 5320 2.5E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF02369 Bacterial Ig-like domain (group 1) 5334 5416 1.1E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2298 2391 1.33E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4419 4524 1.96E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1330 1424 3.14E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 Pfam PF11924 Invasin beta-domain of outer membrane 165 438 3.7E-116 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4329 4423 1.2E-20 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1523 1615 1.04E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1427 1521 1.49E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3264 3358 5.69E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 4135 4227 6.87E-13 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PRINTS PR01369 Intimin signature 318 337 3.5E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PRINTS PR01369 Intimin signature 290 305 3.5E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PRINTS PR01369 Intimin signature 473 485 3.5E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PRINTS PR01369 Intimin signature 386 405 3.5E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1620 1714 2.55E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3457 3549 4.51E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2781 2875 3.34E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3844 3938 2.94E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 3167 3261 2.94E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576:SF2 2869 3621 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576:SF2 4115 5623 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576:SF2 4 636 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 PANTHER PTHR39576:SF2 3816 3921 0.0 T 22-04-2016 YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 2008 2101 6.47E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS20490 f1dd2c77b3a746862501e6a8610f8a80 5623 SUPERFAMILY SSF49373 1136 1228 1.06E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS15810 210460e9e682cd1ae9c4a00257c51e8d 175 SUPERFAMILY SSF82808 60 175 2.88E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YPTB_RS15810 210460e9e682cd1ae9c4a00257c51e8d 175 SUPERFAMILY SSF47598 1 35 7.45E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPTB_RS15810 210460e9e682cd1ae9c4a00257c51e8d 175 Pfam PF03925 SeqA protein C-terminal domain 65 173 4.2E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YPTB_RS15810 210460e9e682cd1ae9c4a00257c51e8d 175 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 175 42.058 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 YPTB_RS15810 210460e9e682cd1ae9c4a00257c51e8d 175 Gene3D G3DSA:1.20.1380.10 62 175 3.9E-53 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YPTB_RS15810 210460e9e682cd1ae9c4a00257c51e8d 175 Gene3D G3DSA:1.10.1220.10 1 40 6.6E-27 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.4E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 189 8.7E-15 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 PANTHER PTHR11260:SF154 1 200 1.2E-132 T 22-04-2016 YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 SUPERFAMILY SSF47616 84 199 3.06E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 Gene3D G3DSA:1.20.1050.10 90 188 1.4E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 PANTHER PTHR11260 1 200 1.2E-132 T 22-04-2016 YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 Gene3D G3DSA:3.40.30.10 1 89 1.4E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS12430 aea91bdb5c03821cb2bedd580915625e 201 SUPERFAMILY SSF52833 1 79 4.12E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 PANTHER PTHR24220:SF535 17 325 4.7E-163 T 22-04-2016 YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 SMART SM00382 44 250 4.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 PANTHER PTHR24220 17 325 4.7E-163 T 22-04-2016 YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 326 1.2E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 SUPERFAMILY SSF52540 45 310 7.72E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 Pfam PF00005 ABC transporter 36 192 2.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 Gene3D G3DSA:3.40.50.300 6 272 4.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11540 1692d9e9e4269dfd39df8c2662fdcac8 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 1.1E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 9.2E-29 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 PANTHER PTHR10996:SF118 1 323 4.0E-158 T 22-04-2016 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 SUPERFAMILY SSF51735 100 288 6.09E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 67.673 T 22-04-2016 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.0E-61 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 SUPERFAMILY SSF52283 1 133 7.18E-30 T 22-04-2016 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 PANTHER PTHR10996 1 323 4.0E-158 T 22-04-2016 YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 Gene3D G3DSA:3.40.50.720 2 113 7.1E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS21115 4d231e1cbd9e8c566c5254074afb5aa7 326 Gene3D G3DSA:3.40.50.720 114 287 1.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.4E-23 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.4E-23 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.4E-23 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.4E-23 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.4E-23 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 Gene3D G3DSA:3.40.250.10 457 545 3.6E-23 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS14760 58e848204490da7893ef8c863c480331 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 434 3.5E-12 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 Gene3D G3DSA:3.50.50.60 114 318 3.7E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PANTHER PTHR22912 1 443 4.4E-198 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PANTHER PTHR22912:SF140 1 443 4.4E-198 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 309 3.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 Pfam PF00581 Rhodanese-like domain 460 543 1.5E-12 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS14760 58e848204490da7893ef8c863c480331 548 SMART SM00450 453 548 8.8E-17 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS14760 58e848204490da7893ef8c863c480331 548 SUPERFAMILY SSF51905 2 318 1.85E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 SUPERFAMILY SSF55424 325 447 1.36E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 Gene3D G3DSA:3.30.390.30 338 448 6.0E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 Gene3D G3DSA:3.50.50.60 3 113 6.0E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.5E-17 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 2.5E-17 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 2.5E-17 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.5E-17 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 2.5E-17 T 22-04-2016 YPTB_RS14760 58e848204490da7893ef8c863c480331 548 SUPERFAMILY SSF52821 432 543 3.4E-26 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 SMART SM00493 1 124 6.5E-32 T 22-04-2016 IPR006171 Toprim domain YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 641 65.976 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PANTHER PTHR11390:SF21 1 503 1.9E-197 T 22-04-2016 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PANTHER PTHR11390:SF21 521 609 1.9E-197 T 22-04-2016 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 SUPERFAMILY SSF56712 1 608 1.83E-188 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Pfam PF01751 Toprim domain 3 135 1.8E-18 T 22-04-2016 IPR006171 Toprim domain YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 SMART SM00437 280 558 1.3E-103 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PANTHER PTHR11390 1 503 1.9E-197 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PANTHER PTHR11390 521 609 1.9E-197 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 631 8.8E-278 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Gene3D G3DSA:1.10.460.10 158 217 5.7E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Gene3D G3DSA:1.10.460.10 490 607 5.7E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Pfam PF01131 DNA topoisomerase 158 593 1.2E-111 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Gene3D G3DSA:2.70.20.10 218 252 1.2E-47 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Gene3D G3DSA:2.70.20.10 369 488 1.2E-47 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 SMART SM00436 128 223 6.8E-36 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YPTB_RS11445 2d9be3e737c33b2d96a52274ed4c9aee 641 Gene3D G3DSA:3.40.50.140 1 153 1.6E-48 T 22-04-2016 IPR006171 Toprim domain YPTB_RS12615 1b39e1144afcc9376494172dea65d14a 123 PANTHER PTHR10072:SF47 1 123 1.8E-82 T 22-04-2016 YPTB_RS12615 1b39e1144afcc9376494172dea65d14a 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 4.4E-34 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YPTB_RS12615 1b39e1144afcc9376494172dea65d14a 123 Gene3D G3DSA:2.60.300.12 19 112 4.6E-30 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS12615 1b39e1144afcc9376494172dea65d14a 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTB_RS12615 1b39e1144afcc9376494172dea65d14a 123 SUPERFAMILY SSF89360 19 112 1.37E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS12615 1b39e1144afcc9376494172dea65d14a 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 9.6E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS12615 1b39e1144afcc9376494172dea65d14a 123 PANTHER PTHR10072 1 123 1.8E-82 T 22-04-2016 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 Gene3D G3DSA:3.40.30.10 6 109 2.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 PANTHER PTHR10438:SF288 7 134 2.0E-66 T 22-04-2016 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 Gene3D G3DSA:1.25.40.10 110 201 3.8E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 SUPERFAMILY SSF48452 120 241 2.18E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 SUPERFAMILY SSF52833 4 113 5.69E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 Pfam PF14559 Tetratricopeptide repeat 124 195 2.1E-18 T 22-04-2016 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 Pfam PF14561 Tetratricopeptide repeat 200 289 7.2E-30 T 22-04-2016 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 PANTHER PTHR10438 7 134 2.0E-66 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 Pfam PF00085 Thioredoxin 7 107 4.8E-18 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YPTB_RS05660 5888fefcb859a7fd3895ee9f7ea84589 289 Gene3D G3DSA:1.25.40.10 202 289 5.4E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS00355 313f5f33950eb94c233d28f942ee6ed8 260 Gene3D G3DSA:3.90.550.10 3 111 2.7E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS00355 313f5f33950eb94c233d28f942ee6ed8 260 Pfam PF00535 Glycosyl transferase family 2 8 132 5.5E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPTB_RS00355 313f5f33950eb94c233d28f942ee6ed8 260 PANTHER PTHR10859 4 132 8.5E-33 T 22-04-2016 YPTB_RS00355 313f5f33950eb94c233d28f942ee6ed8 260 SUPERFAMILY SSF53448 3 150 1.59E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-28 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 PANTHER PTHR11918 1 474 6.4E-241 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 Pfam PF04055 Radical SAM superfamily 151 325 9.8E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 Pfam PF01938 TRAM domain 378 440 3.7E-18 T 22-04-2016 IPR002792 TRAM domain YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.904 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 Gene3D G3DSA:3.80.30.20 146 380 2.7E-81 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 SMART SM00729 147 367 3.5E-64 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 5.7E-157 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 PANTHER PTHR11918:SF43 1 474 6.4E-241 T 22-04-2016 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 438 2.4E-207 T 22-04-2016 YPTB_RS06125 c68d68e7cb15f29a0886573bddd6c526 474 SUPERFAMILY SSF102114 127 372 4.19E-64 T 22-04-2016 YPTB_RS05595 2ef9636158c6a42d8333aec2fb27927c 383 SUPERFAMILY SSF160355 67 333 3.79E-81 T 22-04-2016 YPTB_RS05595 2ef9636158c6a42d8333aec2fb27927c 383 Pfam PF02706 Chain length determinant protein 28 192 6.2E-23 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 YPTB_RS05595 2ef9636158c6a42d8333aec2fb27927c 383 Gene3D G3DSA:3.30.1890.10 57 214 5.4E-58 T 22-04-2016 YPTB_RS05595 2ef9636158c6a42d8333aec2fb27927c 383 Gene3D G3DSA:1.10.287.210 215 320 2.3E-41 T 22-04-2016 YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 SUPERFAMILY SSF51604 23 139 7.42E-10 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 Gene3D G3DSA:3.20.20.70 35 132 1.8E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 PIRSF PIRSF004640 1 364 2.1E-145 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 SUPERFAMILY SSF56014 266 332 1.6E-10 T 22-04-2016 YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.01 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 Pfam PF04551 GcpE protein 14 354 2.9E-129 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 7.4E-123 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPTB_RS15375 cab8f99a68acec2aca27ffcdb67ded08 375 PANTHER PTHR30454 1 372 9.7E-224 T 22-04-2016 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 Gene3D G3DSA:2.40.50.100 278 348 1.3E-22 T 22-04-2016 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 PANTHER PTHR24220 1 256 6.2E-116 T 22-04-2016 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 PANTHER PTHR24220 272 301 6.2E-116 T 22-04-2016 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 SUPERFAMILY SSF52540 7 221 3.72E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 SUPERFAMILY SSF50331 235 350 2.34E-24 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 290 349 2.1E-16 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 Pfam PF00005 ABC transporter 17 156 2.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 1.8E-151 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 PANTHER PTHR24220:SF284 1 256 6.2E-116 T 22-04-2016 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 PANTHER PTHR24220:SF284 272 301 6.2E-116 T 22-04-2016 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 Gene3D G3DSA:3.40.50.300 18 220 1.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 SMART SM00382 23 206 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS06535 7cf4e5473e072c8e7a6a8761d5fe19db 359 Pfam PF03459 TOBE domain 290 349 1.7E-17 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 Pfam PF00672 HAMP domain 216 286 7.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 SUPERFAMILY SSF58104 257 543 2.62E-60 T 22-04-2016 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PANTHER PTHR32089 151 541 1.3E-145 T 22-04-2016 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 SMART SM00283 291 538 2.1E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 211 231 1.1E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 341 1.1E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 27 52 1.1E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 466 495 1.1E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 1.1E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 82 97 1.1E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 1.1E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 SMART SM00319 66 201 3.2E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 537 2.3E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 Gene3D G3DSA:1.20.120.30 58 196 1.2E-41 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 SUPERFAMILY SSF47170 47 197 2.49E-40 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 SMART SM00304 236 290 8.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 Pfam PF02203 Tar ligand binding domain homologue 25 193 9.4E-38 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 PANTHER PTHR32089:SF63 151 541 1.3E-145 T 22-04-2016 YPTB_RS16525 ecb5caf551897cfb8ef3f3370e524112 563 Gene3D G3DSA:1.10.287.950 306 510 3.2E-52 T 22-04-2016 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 Pfam PF13505 Outer membrane protein beta-barrel domain 9 174 3.3E-22 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 Gene3D G3DSA:2.40.160.20 26 174 1.1E-40 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 SUPERFAMILY SSF56925 28 174 2.88E-30 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 162 173 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 135 156 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 86 109 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 PANTHER PTHR35892:SF3 2 174 3.5E-131 T 22-04-2016 YPTB_RS13800 7f3ec854cdb6e7a7b992eac27c39ae50 174 PANTHER PTHR35892 2 174 3.5E-131 T 22-04-2016 YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 SUPERFAMILY SSF50891 26 188 1.23E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 1.3E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 Gene3D G3DSA:2.40.100.10 26 188 5.2E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 PANTHER PTHR11071:SF265 25 188 2.7E-68 T 22-04-2016 YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 7.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 7.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 7.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPTB_RS20195 f795ada360a598fdfc0e0a8cc1e04bbe 189 PANTHER PTHR11071 25 188 2.7E-68 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 Pfam PF05175 Methyltransferase small domain 167 333 2.3E-57 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 PANTHER PTHR18895 53 345 2.2E-178 T 22-04-2016 YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.5E-58 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 SUPERFAMILY SSF53335 155 315 8.51E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 Gene3D G3DSA:3.40.50.150 162 331 5.1E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.099 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS03245 cd504c8bf8bf6fd9c0adedda87c71156 347 PANTHER PTHR18895:SF70 53 345 2.2E-178 T 22-04-2016 YPTB_RS15455 695d8974489163404315b1553d6966d8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTB_RS15455 695d8974489163404315b1553d6966d8 107 SUPERFAMILY SSF89360 1 95 2.75E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS15455 695d8974489163404315b1553d6966d8 107 PANTHER PTHR10072 3 107 1.4E-50 T 22-04-2016 YPTB_RS15455 695d8974489163404315b1553d6966d8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.5E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YPTB_RS15455 695d8974489163404315b1553d6966d8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.3E-25 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS15455 695d8974489163404315b1553d6966d8 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.793 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 YPTB_RS15455 695d8974489163404315b1553d6966d8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.6E-58 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 YPTB_RS15455 695d8974489163404315b1553d6966d8 107 Gene3D G3DSA:2.60.300.12 2 95 1.2E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS16600 afaf6490a5d36e7c1effe7d5d615c2cb 133 Pfam PF11356 Type II secretion system protein C 44 130 7.9E-11 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal YPTB_RS13720 e5b6d8da1c702b31d1a0b5fe2144005e 169 Pfam PF10004 Uncharacterized protein conserved in bacteria (DUF2247) 8 164 2.3E-55 T 22-04-2016 IPR016630 Uncharacterised conserved protein UCP015278 YPTB_RS13720 e5b6d8da1c702b31d1a0b5fe2144005e 169 PIRSF PIRSF015278 1 169 1.6E-72 T 22-04-2016 IPR016630 Uncharacterised conserved protein UCP015278 YPTB_RS08520 949648b4c86a78c90850a478e0ce1522 604 PANTHER PTHR34384 8 604 0.0 T 22-04-2016 YPTB_RS08520 949648b4c86a78c90850a478e0ce1522 604 Pfam PF04183 IucA / IucC family 150 399 9.9E-76 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 YPTB_RS08520 949648b4c86a78c90850a478e0ce1522 604 Pfam PF06276 Ferric iron reductase FhuF-like transporter 421 578 3.2E-38 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPTB_RS08520 949648b4c86a78c90850a478e0ce1522 604 PANTHER PTHR34384:SF5 8 604 0.0 T 22-04-2016 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.9E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 SUPERFAMILY SSF52540 1 212 1.67E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 Pfam PF00406 Adenylate kinase 5 185 5.6E-60 T 22-04-2016 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.104 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.9E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 Gene3D G3DSA:3.40.50.300 1 212 1.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 PANTHER PTHR23359 1 213 4.4E-110 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS05500 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 Gene3D G3DSA:3.40.50.150 3 149 5.0E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 Gene3D G3DSA:3.40.50.150 214 297 5.0E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 26 31 - T 22-04-2016 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PANTHER PTHR13370 210 298 5.9E-29 T 22-04-2016 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PANTHER PTHR13370 4 191 5.9E-29 T 22-04-2016 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 232 249 5.7E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 274 294 5.7E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 251 269 5.7E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 59 79 5.7E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 21 35 5.7E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 SUPERFAMILY SSF53335 217 294 6.25E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 SUPERFAMILY SSF53335 3 162 6.25E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 Pfam PF01555 DNA methylase 22 288 4.4E-53 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PANTHER PTHR13370:SF4 210 298 5.9E-29 T 22-04-2016 YPTB_RS09895 969691f869ea289ddf054e8107e0edbe 308 PANTHER PTHR13370:SF4 4 191 5.9E-29 T 22-04-2016 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 Gene3D G3DSA:3.40.1030.10 74 329 2.4E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 SUPERFAMILY SSF52418 70 328 5.63E-92 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 Gene3D G3DSA:1.20.970.10 2 68 6.3E-25 T 22-04-2016 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 38.945 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 PANTHER PTHR11922:SF25 67 325 7.8E-125 T 22-04-2016 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 2.9E-126 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 PANTHER PTHR11922 67 325 7.8E-125 T 22-04-2016 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 Pfam PF00591 Glycosyl transferase family, a/b domain 74 321 6.9E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 62 7.3E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB_RS11635 c0ab30c071a81ce468288fcf05b8ebca 332 SUPERFAMILY SSF47648 1 67 2.35E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.40.50.670 718 786 3.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.40.50.670 404 550 3.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.30.565.10 15 218 4.0E-93 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF55874 4 220 1.44E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.30.230.10 220 392 8.4E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 109.687 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF01751 Toprim domain 419 531 5.1E-18 T 22-04-2016 IPR006171 Toprim domain YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF54211 221 392 3.79E-62 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF56719 730 795 1.12E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF56719 394 560 1.12E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 SMART SM00433 35 797 3.8E-281 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PANTHER PTHR10169 1 553 0.0 T 22-04-2016 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 PANTHER PTHR10169 722 804 0.0 T 22-04-2016 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 SMART SM00387 31 175 6.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF00204 DNA gyrase B 221 390 3.0E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS21280 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 2.0E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 6.3E-179 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 PANTHER PTHR11564 1 434 7.6E-277 T 22-04-2016 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 SMART SM00963 1 86 1.9E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 Pfam PF02978 Signal peptide binding domain 329 427 1.3E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 Gene3D G3DSA:3.40.50.300 94 297 2.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 Gene3D G3DSA:1.20.120.140 2 88 4.1E-36 T 22-04-2016 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 PANTHER PTHR11564:SF7 1 434 7.6E-277 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 SUPERFAMILY SSF47446 298 431 2.62E-45 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 SMART SM00382 99 247 4.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 Gene3D G3DSA:1.10.260.30 329 431 3.2E-40 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.6E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 SMART SM00962 100 296 6.6E-117 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.859 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.4E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS04625 0fe848c6b95f0f7a01d057ec9a034507 453 SUPERFAMILY SSF52540 42 354 3.32E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00310 9ab99f9e3e64a0bcb7222fa44029c815 215 Pfam PF00156 Phosphoribosyl transferase domain 49 159 9.5E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPTB_RS00310 9ab99f9e3e64a0bcb7222fa44029c815 215 PANTHER PTHR19278:SF36 1 213 8.0E-151 T 22-04-2016 YPTB_RS00310 9ab99f9e3e64a0bcb7222fa44029c815 215 SUPERFAMILY SSF53271 2 212 3.98E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS00310 9ab99f9e3e64a0bcb7222fa44029c815 215 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 215 35.258 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS00310 9ab99f9e3e64a0bcb7222fa44029c815 215 Gene3D G3DSA:3.40.50.2020 7 212 4.3E-81 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS00310 9ab99f9e3e64a0bcb7222fa44029c815 215 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.6E-66 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS00310 9ab99f9e3e64a0bcb7222fa44029c815 215 PANTHER PTHR19278 1 213 8.0E-151 T 22-04-2016 YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.5E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 2.4E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 SUPERFAMILY SSF52540 3 266 1.96E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 Gene3D G3DSA:3.40.50.300 2 262 8.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 PANTHER PTHR24220 5 329 7.6E-223 T 22-04-2016 YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 SMART SM00382 32 235 1.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 PANTHER PTHR24220:SF514 5 329 7.6E-223 T 22-04-2016 YPTB_RS12400 5434025266aa6f9bb2a6796872f44c09 330 Pfam PF00005 ABC transporter 24 187 1.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07580 c404471c3db5f49fd78186180414cb80 261 Gene3D G3DSA:3.40.50.300 3 227 2.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07580 c404471c3db5f49fd78186180414cb80 261 SUPERFAMILY SSF52540 4 223 2.11E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07580 c404471c3db5f49fd78186180414cb80 261 PANTHER PTHR24220:SF218 5 240 1.4E-66 T 22-04-2016 YPTB_RS07580 c404471c3db5f49fd78186180414cb80 261 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07580 c404471c3db5f49fd78186180414cb80 261 Pfam PF00005 ABC transporter 19 160 7.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07580 c404471c3db5f49fd78186180414cb80 261 PANTHER PTHR24220 5 240 1.4E-66 T 22-04-2016 YPTB_RS07580 c404471c3db5f49fd78186180414cb80 261 SMART SM00382 28 209 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04450 3109300834fef133e8b4a41935d54341 334 PANTHER PTHR32196:SF36 1 332 1.1E-221 T 22-04-2016 YPTB_RS04450 3109300834fef133e8b4a41935d54341 334 SUPERFAMILY SSF53822 32 303 1.88E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS04450 3109300834fef133e8b4a41935d54341 334 Gene3D G3DSA:3.40.50.2300 154 300 1.7E-21 T 22-04-2016 YPTB_RS04450 3109300834fef133e8b4a41935d54341 334 Gene3D G3DSA:3.40.50.2300 35 153 2.0E-29 T 22-04-2016 YPTB_RS04450 3109300834fef133e8b4a41935d54341 334 PANTHER PTHR32196 1 332 1.1E-221 T 22-04-2016 YPTB_RS04450 3109300834fef133e8b4a41935d54341 334 Pfam PF13407 Periplasmic binding protein domain 37 292 2.5E-51 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS15145 57574e446e1b019e922f4251088ee482 181 PANTHER PTHR13256:SF21 1 178 6.7E-80 T 22-04-2016 YPTB_RS15145 57574e446e1b019e922f4251088ee482 181 SUPERFAMILY SSF55729 3 164 6.67E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS15145 57574e446e1b019e922f4251088ee482 181 Gene3D G3DSA:3.40.630.30 3 165 2.9E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS15145 57574e446e1b019e922f4251088ee482 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 6.1E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS15145 57574e446e1b019e922f4251088ee482 181 PANTHER PTHR13256 1 178 6.7E-80 T 22-04-2016 YPTB_RS02020 5729baa30a2e6b3d348a822d4c6bab2c 437 PANTHER PTHR13932 1 434 1.4E-200 T 22-04-2016 YPTB_RS02020 5729baa30a2e6b3d348a822d4c6bab2c 437 PANTHER PTHR13932:SF5 1 434 1.4E-200 T 22-04-2016 YPTB_RS02020 5729baa30a2e6b3d348a822d4c6bab2c 437 Pfam PF04055 Radical SAM superfamily 59 228 4.8E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS02020 5729baa30a2e6b3d348a822d4c6bab2c 437 SMART SM00729 53 275 5.4E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS02020 5729baa30a2e6b3d348a822d4c6bab2c 437 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 16 427 1.4E-175 T 22-04-2016 IPR026332 Putative heme utilization radical SAM enzyme HutW YPTB_RS02020 5729baa30a2e6b3d348a822d4c6bab2c 437 SUPERFAMILY SSF102114 5 423 1.57E-90 T 22-04-2016 YPTB_RS02020 5729baa30a2e6b3d348a822d4c6bab2c 437 Gene3D G3DSA:3.80.30.20 56 256 2.7E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 PANTHER PTHR11544:SF54 1 70 6.4E-47 T 22-04-2016 YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 5.5E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 PRINTS PR00050 Cold shock protein signature 43 61 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 PRINTS PR00050 Cold shock protein signature 7 22 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 PRINTS PR00050 Cold shock protein signature 28 37 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 PIRSF PIRSF002599 1 70 1.7E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 SMART SM00357 6 70 4.2E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 SUPERFAMILY SSF50249 3 69 5.49E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 Gene3D G3DSA:2.40.50.140 5 68 3.1E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19400 97a323aa15f1edae5648e4adfd0db9e7 70 PANTHER PTHR11544 1 70 6.4E-47 T 22-04-2016 YPTB_RS07450 483b338ee37206366d6df49fc14d7b81 274 PANTHER PTHR30429:SF0 1 271 3.4E-136 T 22-04-2016 YPTB_RS07450 483b338ee37206366d6df49fc14d7b81 274 PANTHER PTHR30429 1 271 3.4E-136 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPTB_RS07450 483b338ee37206366d6df49fc14d7b81 274 SUPERFAMILY SSF53850 32 270 5.07E-67 T 22-04-2016 YPTB_RS07450 483b338ee37206366d6df49fc14d7b81 274 Pfam PF03180 NLPA lipoprotein 32 269 4.9E-78 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPTB_RS07450 483b338ee37206366d6df49fc14d7b81 274 Gene3D G3DSA:3.40.190.10 108 221 2.0E-44 T 22-04-2016 YPTB_RS07450 483b338ee37206366d6df49fc14d7b81 274 PIRSF PIRSF002854 1 271 2.9E-97 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 PANTHER PTHR31689 1 272 7.6E-142 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 Gene3D G3DSA:3.10.310.10 1 121 1.9E-50 T 22-04-2016 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 Pfam PF01678 Diaminopimelate epimerase 152 267 5.1E-32 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 Pfam PF01678 Diaminopimelate epimerase 3 122 1.1E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 Gene3D G3DSA:3.10.310.10 122 262 4.1E-51 T 22-04-2016 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 38.968 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 SUPERFAMILY SSF54506 2 273 1.68E-53 T 22-04-2016 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 4.2E-102 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS01155 c27ec898f19ac287e2e6d136a147136c 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS05565 1f8226b90f6ce614632a9850f24d13f9 337 PANTHER PTHR12526:SF399 1 335 3.5E-53 T 22-04-2016 YPTB_RS05565 1f8226b90f6ce614632a9850f24d13f9 337 Pfam PF13439 Glycosyltransferase Family 4 54 156 3.3E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain YPTB_RS05565 1f8226b90f6ce614632a9850f24d13f9 337 PANTHER PTHR12526 1 335 3.5E-53 T 22-04-2016 YPTB_RS05565 1f8226b90f6ce614632a9850f24d13f9 337 Pfam PF00534 Glycosyl transferases group 1 165 305 5.5E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YPTB_RS05565 1f8226b90f6ce614632a9850f24d13f9 337 Gene3D G3DSA:3.40.50.2000 172 301 5.4E-16 T 22-04-2016 YPTB_RS05565 1f8226b90f6ce614632a9850f24d13f9 337 SUPERFAMILY SSF53756 1 335 1.35E-63 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 Gene3D G3DSA:3.55.50.10 127 219 1.4E-34 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 Gene3D G3DSA:2.40.50.230 397 478 6.3E-41 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 SUPERFAMILY SSF69279 39 214 7.94E-55 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 PANTHER PTHR32305:SF11 18 707 0.0 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 PANTHER PTHR32305 18 707 0.0 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 51 530 3.9E-206 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 SUPERFAMILY SSF69349 469 716 3.45E-48 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 39 548 1.6E-204 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 SUPERFAMILY SSF69279 218 392 1.21E-42 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 530 551 1.5E-4 T 22-04-2016 IPR010609 Gp5, C-terminal YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 SUPERFAMILY SSF69255 391 478 1.36E-33 T 22-04-2016 YPTB_RS17770 49457e253d27c62ab9b84ce79e3e5db9 741 Pfam PF05954 Phage late control gene D protein (GPD) 58 356 1.6E-86 T 22-04-2016 YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 PANTHER PTHR18968:SF116 2 575 0.0 T 22-04-2016 YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 1.7E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52467 188 362 3.44E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 9.0E-278 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 9.7E-46 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 4.3E-60 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.970 357 559 1.3E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.1220 189 356 8.9E-66 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.970 2 178 4.4E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52518 2 180 1.94E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52518 368 572 5.18E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03785 cfef62c0ce81c9a0114981dd07a6ad96 575 PANTHER PTHR18968 2 575 0.0 T 22-04-2016 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 PIRSF PIRSF000130 1 487 2.2E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.055 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911:SF6 1 281 9.3E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911:SF6 299 487 9.3E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 SMART SM00116 158 206 4.2E-9 T 22-04-2016 IPR000644 CBS domain YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 SMART SM00116 96 144 7.2E-9 T 22-04-2016 IPR000644 CBS domain YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF54631 95 203 3.16E-25 T 22-04-2016 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.6E-159 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00571 CBS domain 95 140 1.0E-7 T 22-04-2016 IPR000644 CBS domain YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00571 CBS domain 149 202 3.8E-6 T 22-04-2016 IPR000644 CBS domain YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911 1 281 9.3E-247 T 22-04-2016 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911 299 487 9.3E-247 T 22-04-2016 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF51412 217 477 8.37E-124 T 22-04-2016 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF51412 1 90 8.37E-124 T 22-04-2016 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.3E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 SMART SM01240 7 473 0.0 T 22-04-2016 YPTB_RS15335 3d930c20dcb434140018d68f6686ba28 487 Gene3D G3DSA:3.20.20.70 2 485 3.9E-192 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 7.2E-20 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS12100 036b47275796147511be6ae9130d2852 224 PANTHER PTHR12725 1 222 2.5E-51 T 22-04-2016 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 SUPERFAMILY SSF56784 2 222 3.01E-47 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS12100 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 220 1.2E-74 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 Gene3D G3DSA:3.40.50.1000 93 222 5.8E-41 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS12100 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 54 195 1.3E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 2.5E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 Gene3D G3DSA:1.10.150.240 15 92 2.7E-21 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPTB_RS12100 036b47275796147511be6ae9130d2852 224 PANTHER PTHR12725:SF57 1 222 2.5E-51 T 22-04-2016 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 SUPERFAMILY SSF53686 4 289 6.55E-92 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.1E-122 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 Gene3D G3DSA:3.40.50.1100 40 139 4.3E-37 T 22-04-2016 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 7.6E-150 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 Gene3D G3DSA:3.40.50.1100 2 39 7.1E-81 T 22-04-2016 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 Gene3D G3DSA:3.40.50.1100 146 292 7.1E-81 T 22-04-2016 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 PANTHER PTHR10314 3 292 3.9E-174 T 22-04-2016 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 PANTHER PTHR10314:SF100 3 292 3.9E-174 T 22-04-2016 YPTB_RS14805 b7368103c28f48d4639b5611f6998c9e 297 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 2.8E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS14135 7ae49199b636f4e564f0e1649cf5d9e6 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.2E-114 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 YPTB_RS14135 7ae49199b636f4e564f0e1649cf5d9e6 302 Gene3D G3DSA:3.40.50.720 1 251 4.6E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14135 7ae49199b636f4e564f0e1649cf5d9e6 302 PANTHER PTHR11092 1 302 4.7E-158 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 YPTB_RS14135 7ae49199b636f4e564f0e1649cf5d9e6 302 SUPERFAMILY SSF51735 1 298 8.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14135 7ae49199b636f4e564f0e1649cf5d9e6 302 PANTHER PTHR11092:SF0 1 302 4.7E-158 T 22-04-2016 YPTB_RS14135 7ae49199b636f4e564f0e1649cf5d9e6 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 9.1E-19 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS14135 7ae49199b636f4e564f0e1649cf5d9e6 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.4E-19 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 Gene3D G3DSA:3.40.50.970 2 176 1.7E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 SUPERFAMILY SSF52518 1 177 5.89E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 SUPERFAMILY SSF52518 357 552 2.08E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 Gene3D G3DSA:3.40.50.970 354 552 1.1E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 326 1.3E-40 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 2.9E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 553 9.9E-196 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 PANTHER PTHR18968:SF128 1 555 0.0 T 22-04-2016 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 PANTHER PTHR18968 1 555 0.0 T 22-04-2016 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 530 5.2E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 SUPERFAMILY SSF52467 186 350 4.43E-54 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS12090 7cedd4984c7d6291afd563559f3600da 555 Gene3D G3DSA:3.40.50.1220 188 351 1.1E-56 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS07610 ae3d7ca3da9245f7c0f7adde5edb09d8 238 PANTHER PTHR30133:SF2 1 238 3.2E-160 T 22-04-2016 YPTB_RS07610 ae3d7ca3da9245f7c0f7adde5edb09d8 238 PANTHER PTHR30133 1 238 3.2E-160 T 22-04-2016 YPTB_RS07610 ae3d7ca3da9245f7c0f7adde5edb09d8 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 4.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07610 ae3d7ca3da9245f7c0f7adde5edb09d8 238 SUPERFAMILY SSF161098 7 216 1.44E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07610 ae3d7ca3da9245f7c0f7adde5edb09d8 238 Gene3D G3DSA:1.10.3720.10 4 230 3.4E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07610 ae3d7ca3da9245f7c0f7adde5edb09d8 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 8.0E-12 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS19690 9ca9ec5122d1d1a771d45ebf09fb6499 423 Gene3D G3DSA:2.40.170.10 25 423 2.8E-165 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPTB_RS19690 9ca9ec5122d1d1a771d45ebf09fb6499 423 SUPERFAMILY SSF56935 25 423 1.71E-147 T 22-04-2016 YPTB_RS19690 9ca9ec5122d1d1a771d45ebf09fb6499 423 Pfam PF02264 LamB porin 27 423 6.1E-144 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPTB_RS19690 9ca9ec5122d1d1a771d45ebf09fb6499 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 418 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPTB_RS19690 9ca9ec5122d1d1a771d45ebf09fb6499 423 PANTHER PTHR38762 1 423 3.6E-213 T 22-04-2016 YPTB_RS19690 9ca9ec5122d1d1a771d45ebf09fb6499 423 Hamap MF_01301 Maltoporin [lamB]. 3 423 42.99 T 22-04-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 YPTB_RS12265 624f8099109caab3808a571829ff4c92 150 PANTHER PTHR35535 1 150 1.4E-42 T 22-04-2016 YPTB_RS12265 624f8099109caab3808a571829ff4c92 150 Pfam PF03724 META domain 40 140 7.1E-19 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Pfam PF04539 Sigma-70 region 3 97 163 7.5E-13 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Gene3D G3DSA:1.10.601.10 10 80 5.4E-15 T 22-04-2016 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PANTHER PTHR30385 13 240 1.6E-69 T 22-04-2016 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 2.3E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Gene3D G3DSA:1.10.10.10 90 135 8.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 8.5E-84 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 SUPERFAMILY SSF88659 90 162 4.19E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.193 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Gene3D G3DSA:1.10.10.10 174 238 3.6E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PIRSF PIRSF000770 3 240 2.9E-40 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PANTHER PTHR30385:SF7 13 240 1.6E-69 T 22-04-2016 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Pfam PF04545 Sigma-70, region 4 185 234 3.3E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 SUPERFAMILY SSF88659 150 238 2.62E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Pfam PF04542 Sigma-70 region 2 16 88 2.9E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09430 75c3068bd574fa8fc1e39afa4cb0d7f3 240 SUPERFAMILY SSF88946 5 88 2.2E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 391 409 1.0E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 463 478 1.0E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 374 1.0E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 154 169 1.0E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 547 562 1.0E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 61 226 3.3E-64 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Pfam PF02929 Beta galactosidase small chain 795 1060 2.6E-58 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PANTHER PTHR10066 1 592 0.0 T 22-04-2016 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PANTHER PTHR10066 610 1060 0.0 T 22-04-2016 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 401 426 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 SMART SM01038 790 1063 8.9E-119 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Gene3D G3DSA:3.20.20.80 351 637 2.2E-113 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Gene3D G3DSA:2.60.120.260 13 215 2.8E-85 T 22-04-2016 IPR008979 Galactose-binding domain-like YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 644 1.3E-113 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Gene3D G3DSA:2.60.40.320 641 746 2.8E-26 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 SUPERFAMILY SSF49303 228 349 1.67E-20 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Pfam PF00703 Glycosyl hydrolases family 2 228 349 4.0E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Gene3D G3DSA:2.60.40.320 216 349 5.1E-30 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 SUPERFAMILY SSF49303 637 746 2.7E-28 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 SUPERFAMILY SSF51445 351 638 3.63E-99 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 463 477 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Pfam PF16353 Domain of unknown function(DUF4981) 655 743 2.3E-15 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Gene3D G3DSA:2.70.98.10 778 1062 5.6E-86 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 SUPERFAMILY SSF74650 778 1062 1.88E-91 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 Hamap MF_01687 Beta-galactosidase [lacZ]. 13 1065 17.76 T 22-04-2016 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PANTHER PTHR10066:SF72 1 592 0.0 T 22-04-2016 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 PANTHER PTHR10066:SF72 610 1060 0.0 T 22-04-2016 YPTB_RS13140 728183382c20dae002f3a554dfc6fe3f 1066 SUPERFAMILY SSF49785 22 226 3.12E-70 T 22-04-2016 IPR008979 Galactose-binding domain-like YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.8E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.578 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 PANTHER PTHR33823:SF2 8 149 3.3E-70 T 22-04-2016 YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 PANTHER PTHR33823 8 149 3.3E-70 T 22-04-2016 YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF109635 9 110 8.24E-37 T 22-04-2016 YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 22-04-2016 YPTB_RS04095 e48e7ebf611fae039bc107fa1fd6563d 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.3E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YPTB_RS09995 bd5e83612dfcb0a88cd02d35036aa4ed 407 TIGRFAM TIGR04387 capsid_maj_N4: major capsid protein, N4-gp56 family 57 295 6.2E-17 T 22-04-2016 YPTB_RS09995 bd5e83612dfcb0a88cd02d35036aa4ed 407 Pfam PF13252 Protein of unknown function (DUF4043) 53 401 3.1E-138 T 22-04-2016 IPR025267 Protein of unknown function DUF4043 YPTB_RS03095 3c5c37fde0e5e5aeeece468d94594923 163 Pfam PF10696 Protein of unknown function (DUF2501) 82 160 4.5E-29 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 280 1.4E-90 T 22-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 2.3E-61 T 22-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 22-04-2016 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431|UniPathway: UPA00208 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 PIRSF PIRSF000331 11 501 1.7E-191 T 22-04-2016 IPR004925 HpaB/PvcC/4-BUDH YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 SUPERFAMILY SSF56645 13 282 2.33E-80 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 PANTHER PTHR36117:SF1 1 516 0.0 T 22-04-2016 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 Gene3D G3DSA:1.20.140.10 274 479 2.3E-33 T 22-04-2016 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 SUPERFAMILY SSF47203 272 493 5.44E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 Gene3D G3DSA:2.40.110.10 152 273 3.0E-47 T 22-04-2016 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 PANTHER PTHR36117 1 516 0.0 T 22-04-2016 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 Gene3D G3DSA:1.10.3140.10 12 150 1.2E-53 T 22-04-2016 YPTB_RS09065 162d51f5d162aad413d9ac6c2975ccb5 520 PIRSF PIRSF500125 1 518 2.6E-275 T 22-04-2016 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 373 586 1.1E-23 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 369 2.4E-69 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 348 365 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 221 243 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 171 186 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 514 539 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 117 131 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 489 510 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 567 588 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 93 108 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 197 218 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482:SF36 1 391 2.2E-293 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482:SF36 464 622 2.2E-293 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:3.20.20.10 95 357 1.1E-60 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:2.40.37.10 480 611 2.0E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:2.40.37.10 358 381 2.0E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 658 42.642 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 SUPERFAMILY SSF51419 93 370 1.29E-67 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 302 315 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482 1 391 2.2E-293 T 22-04-2016 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482 464 622 2.2E-293 T 22-04-2016 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 657 1.1E-269 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 SUPERFAMILY SSF50621 482 588 1.57E-8 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PIRSF PIRSF001336 17 659 3.9E-254 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 125 143 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 147 159 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 143 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 377 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 567 580 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS17345 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 277 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 PANTHER PTHR34823:SF1 76 215 2.9E-35 T 22-04-2016 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 PANTHER PTHR34823 76 215 2.9E-35 T 22-04-2016 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 SUPERFAMILY SSF81296 21 212 2.24E-40 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 SUPERFAMILY SSF51055 420 466 5.36E-9 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 SMART SM00495 418 467 0.0039 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 21 209 7.3E-31 T 22-04-2016 IPR004302 Chitin-binding protein, N-terminal YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 SUPERFAMILY SSF49265 218 399 8.34E-22 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 SMART SM00060 312 388 1.9E-5 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 SMART SM00060 220 291 1.4E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 Gene3D G3DSA:2.70.50.50 21 211 8.4E-43 T 22-04-2016 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 Gene3D G3DSA:2.10.10.20 420 466 2.9E-5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 Gene3D G3DSA:2.60.40.10 311 398 5.6E-16 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS18190 659444c8fcf1ee654e67ac6538c97ee3 468 Gene3D G3DSA:2.60.40.10 218 299 7.6E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 230 248 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 6 22 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 186 201 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 47 64 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 115 129 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 162 178 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 83 98 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 PRINTS PR01714 Ferric iron reductase signature 204 220 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 230 250 1.5E-6 T 22-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 77 251 9.0E-66 T 22-04-2016 IPR008090 Ferric iron reductase YPTB_RS08470 2ce832eef12d28139ca29d61a86e342a 259 Pfam PF06276 Ferric iron reductase FhuF-like transporter 83 226 1.2E-26 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPTB_RS14145 afd5a9953aee8dc9b34ecbb49c298b39 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 1.7E-14 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS14145 afd5a9953aee8dc9b34ecbb49c298b39 238 PANTHER PTHR30450:SF5 1 237 2.2E-194 T 22-04-2016 YPTB_RS14145 afd5a9953aee8dc9b34ecbb49c298b39 238 PANTHER PTHR30450 1 237 2.2E-194 T 22-04-2016 YPTB_RS14145 afd5a9953aee8dc9b34ecbb49c298b39 238 SUPERFAMILY SSF161098 17 214 1.96E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14145 afd5a9953aee8dc9b34ecbb49c298b39 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 227 7.3E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14145 afd5a9953aee8dc9b34ecbb49c298b39 238 Gene3D G3DSA:1.10.3720.10 18 228 3.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 PANTHER PTHR26402 89 105 7.9E-65 T 22-04-2016 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 PANTHER PTHR26402 140 267 7.9E-65 T 22-04-2016 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 Gene3D G3DSA:3.30.565.10 518 680 4.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 671 2.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 SMART SM00387 562 675 2.4E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 3.33E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 3.33E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 3.33E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 892 26.516 T 22-04-2016 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 SUPERFAMILY SSF47226 798 891 5.63E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 PANTHER PTHR26402:SF603 89 105 7.9E-65 T 22-04-2016 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 PANTHER PTHR26402:SF603 140 267 7.9E-65 T 22-04-2016 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 Pfam PF16359 RcsD-ABL domain 684 783 2.5E-37 T 22-04-2016 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 SUPERFAMILY SSF55874 504 673 5.76E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 Gene3D G3DSA:1.20.120.160 784 891 6.3E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS06955 b78195542cdadf62d44b51e8dc741adc 897 Pfam PF01627 Hpt domain 812 871 8.3E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.2E-53 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 Gene3D G3DSA:1.10.1900.20 55 117 2.3E-31 T 22-04-2016 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 SUPERFAMILY SSF74731 3 117 1.83E-50 T 22-04-2016 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 PANTHER PTHR10986:SF12 2 117 6.3E-68 T 22-04-2016 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 22-04-2016 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 Pfam PF00453 Ribosomal protein L20 3 109 3.8E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.175 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS12740 1f408ec68b6a84a9184df911d1597b81 118 PANTHER PTHR10986 2 117 6.3E-68 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPTB_RS17205 89c136fd6746d66c30046dba774949ac 233 PANTHER PTHR20855:SF3 32 233 7.8E-70 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 YPTB_RS17205 89c136fd6746d66c30046dba774949ac 233 Pfam PF03006 Haemolysin-III related 29 226 4.4E-38 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YPTB_RS17205 89c136fd6746d66c30046dba774949ac 233 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 32 233 4.0E-71 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 YPTB_RS17205 89c136fd6746d66c30046dba774949ac 233 PANTHER PTHR20855 32 233 7.8E-70 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PANTHER PTHR11728 1 339 2.5E-151 T 22-04-2016 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.166 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 SUPERFAMILY SSF51735 8 182 3.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:1.10.1040.10 184 330 1.4E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 2.2E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:3.40.50.720 24 182 1.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:3.50.50.60 4 23 9.6E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 PIRSF PIRSF000114 1 336 2.3E-100 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 SUPERFAMILY SSF48179 184 335 2.44E-58 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS00420 8038d88a40870595258e6de0f9e84ed5 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 162 7.5E-52 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 SMART SM00895 90 217 8.1E-22 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 PANTHER PTHR11751 1 106 7.1E-47 T 22-04-2016 YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 Pfam PF07729 FCD domain 90 216 3.2E-22 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 SUPERFAMILY SSF48008 88 224 1.86E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 Gene3D G3DSA:1.20.120.530 89 226 5.9E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 SMART SM00345 7 66 2.3E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.7E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 PANTHER PTHR11751:SF389 1 106 7.1E-47 T 22-04-2016 YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 SUPERFAMILY SSF46785 2 70 2.36E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS07270 fd2c84e9e0f81013695a15cea7038f12 247 Gene3D G3DSA:1.10.10.10 2 69 2.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04790 ab138a7d3cd59fc48d6ab724efac99f1 257 Pfam PF03591 AzlC protein 27 167 1.7E-38 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease YPTB_RS04790 ab138a7d3cd59fc48d6ab724efac99f1 257 PANTHER PTHR34979 1 250 7.6E-61 T 22-04-2016 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 SUPERFAMILY SSF52283 5 129 2.34E-16 T 22-04-2016 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 278 2.5E-15 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 Gene3D G3DSA:3.40.50.720 2 113 3.6E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.78 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 PANTHER PTHR10996:SF111 1 330 4.0E-193 T 22-04-2016 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 1.7E-31 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 Gene3D G3DSA:3.40.50.720 114 259 3.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 PANTHER PTHR10996 1 330 4.0E-193 T 22-04-2016 YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 SUPERFAMILY SSF51735 91 257 3.78E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14205 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 3.4E-29 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 Gene3D G3DSA:4.10.640.10 8 74 7.9E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 PANTHER PTHR13479 2 74 2.7E-34 T 22-04-2016 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 Pfam PF01084 Ribosomal protein S18 19 68 4.2E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.759 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.3E-36 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02535 3f4b75464bdfc56f443a4f9c474a954f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19205 37b1be73fe2c8032db5ab2b1836c32fb 288 PANTHER PTHR30126:SF13 1 288 3.3E-87 T 22-04-2016 YPTB_RS19205 37b1be73fe2c8032db5ab2b1836c32fb 288 Gene3D G3DSA:1.10.10.10 5 79 5.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19205 37b1be73fe2c8032db5ab2b1836c32fb 288 PANTHER PTHR30126 1 288 3.3E-87 T 22-04-2016 YPTB_RS19205 37b1be73fe2c8032db5ab2b1836c32fb 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS19205 37b1be73fe2c8032db5ab2b1836c32fb 288 SUPERFAMILY SSF46785 6 84 2.67E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 PIRSF PIRSF002799 41 826 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Pfam PF00912 Transglycosylase 214 385 5.0E-55 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Gene3D G3DSA:1.10.3810.10 210 385 1.3E-62 T 22-04-2016 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Gene3D G3DSA:1.20.5.100 61 101 1.9E-23 T 22-04-2016 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 SUPERFAMILY SSF56601 367 389 1.01E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 SUPERFAMILY SSF56601 417 782 1.01E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 SUPERFAMILY SSF53955 201 408 1.6E-65 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Pfam PF14814 Bifunctional transglycosylase second domain 118 202 1.2E-29 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 PANTHER PTHR32282:SF11 189 816 3.2E-303 T 22-04-2016 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Gene3D G3DSA:3.30.2060.10 116 205 7.2E-34 T 22-04-2016 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Pfam PF00905 Penicillin binding protein transpeptidase domain 478 718 5.5E-20 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 83 5.0E-33 T 22-04-2016 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 Gene3D G3DSA:3.40.710.10 386 798 1.0E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 73 800 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS04115 feec07c7581b31bd3ad41e0f3db8c4c7 826 PANTHER PTHR32282 189 816 3.2E-303 T 22-04-2016 YPTB_RS15260 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217:SF6 7 216 6.9E-244 T 22-04-2016 YPTB_RS15260 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217:SF6 256 463 6.9E-244 T 22-04-2016 YPTB_RS15260 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217 7 216 6.9E-244 T 22-04-2016 YPTB_RS15260 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217 256 463 6.9E-244 T 22-04-2016 YPTB_RS15260 e89217c58943926e06888eb9d6521559 464 Pfam PF16325 Peptidase family U32 C-terminal domain 369 450 5.0E-22 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS15260 e89217c58943926e06888eb9d6521559 464 Pfam PF01136 Peptidase family U32 86 353 6.1E-95 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS15260 e89217c58943926e06888eb9d6521559 464 ProSitePatterns PS01276 Peptidase family U32 signature. 172 190 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 PANTHER PTHR11455:SF18 1 478 8.2E-218 T 22-04-2016 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 Gene3D G3DSA:3.40.50.620 2 149 7.3E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 Gene3D G3DSA:1.25.40.80 150 285 1.4E-44 T 22-04-2016 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 SUPERFAMILY SSF52425 3 183 8.9E-54 T 22-04-2016 IPR006050 DNA photolyase, N-terminal YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 PANTHER PTHR11455 1 478 8.2E-218 T 22-04-2016 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 PRINTS PR00147 DNA photolyase signature 384 398 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 PRINTS PR00147 DNA photolyase signature 325 341 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 PRINTS PR00147 DNA photolyase signature 345 363 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 PRINTS PR00147 DNA photolyase signature 145 161 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 SUPERFAMILY SSF48173 192 472 6.54E-108 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 Pfam PF03441 FAD binding domain of DNA photolyase 275 469 1.4E-81 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 Gene3D G3DSA:1.10.579.10 286 472 1.6E-78 T 22-04-2016 YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 Pfam PF00875 DNA photolyase 5 175 1.4E-42 T 22-04-2016 IPR006050 DNA photolyase, N-terminal YPTB_RS15740 3d486c60bd7b9a87ef80234298b59c0c 487 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPTB_RS16795 506b3f3e963827717419ce107a5c1308 333 SUPERFAMILY SSF53822 27 330 1.78E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS16795 506b3f3e963827717419ce107a5c1308 333 PANTHER PTHR32196 15 291 2.3E-41 T 22-04-2016 YPTB_RS16795 506b3f3e963827717419ce107a5c1308 333 Gene3D G3DSA:3.40.50.2300 25 145 4.0E-25 T 22-04-2016 YPTB_RS16795 506b3f3e963827717419ce107a5c1308 333 PANTHER PTHR32196:SF9 15 291 2.3E-41 T 22-04-2016 YPTB_RS16795 506b3f3e963827717419ce107a5c1308 333 Gene3D G3DSA:3.40.50.2300 146 328 1.3E-44 T 22-04-2016 YPTB_RS16795 506b3f3e963827717419ce107a5c1308 333 Pfam PF13407 Periplasmic binding protein domain 29 287 6.8E-44 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 Gene3D G3DSA:3.40.50.300 395 492 1.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 Gene3D G3DSA:3.40.50.300 195 329 1.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 Pfam PF13361 UvrD-like helicase C-terminal domain 587 659 5.4E-13 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 SUPERFAMILY SSF52540 195 348 1.98E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 SUPERFAMILY SSF52540 385 675 1.98E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 1.2E-39 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 PANTHER PTHR11070 99 682 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 Gene3D G3DSA:3.40.50.300 498 674 1.5E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 PANTHER PTHR11070:SF26 99 682 0.0 T 22-04-2016 YPTB_RS08040 ba36d30702c213f0343f87971d6e7394 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 2.4E-65 T 22-04-2016 IPR022161 DNA helicase IV, N-terminal domain YPTB_RS00260 ca6abf2bda65793d5d9556735b9307ce 404 PANTHER PTHR36178:SF1 1 402 7.5E-210 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPTB_RS00260 ca6abf2bda65793d5d9556735b9307ce 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.1E-190 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPTB_RS00260 ca6abf2bda65793d5d9556735b9307ce 404 PANTHER PTHR36178 1 402 7.5E-210 T 22-04-2016 YPTB_RS00260 ca6abf2bda65793d5d9556735b9307ce 404 Pfam PF03616 Sodium/glutamate symporter 2 366 2.6E-160 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PANTHER PTHR10906 18 443 5.9E-236 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Gene3D G3DSA:1.10.3370.10 17 437 1.8E-167 T 22-04-2016 IPR023201 SecY subunit domain YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.3E-98 T 22-04-2016 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 22-04-2016 IPR030659 SecY conserved site YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.984 T 22-04-2016 IPR026593 Protein translocase subunit SecY YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.9E-141 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 SUPERFAMILY SSF103491 16 424 6.28E-134 T 22-04-2016 IPR023201 SecY subunit domain YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Pfam PF00344 SecY translocase 76 417 9.1E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PIRSF PIRSF004557 11 441 1.4E-123 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPTB_RS19915 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PANTHER PTHR10906:SF2 18 443 5.9E-236 T 22-04-2016 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 SUPERFAMILY SSF56719 30 521 9.02E-183 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 7.0E-152 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 843 30.322 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Gene3D G3DSA:3.30.1360.40 236 333 2.3E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 PANTHER PTHR10169:SF48 450 812 0.0 T 22-04-2016 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 PANTHER PTHR10169:SF48 2 418 0.0 T 22-04-2016 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Gene3D G3DSA:1.10.268.10 363 497 6.7E-48 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 1.0E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 9.2E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.4E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 4.8E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 3.9E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.4E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 SMART SM00434 11 499 1.2E-300 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Gene3D G3DSA:3.90.199.10 34 216 8.1E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 SUPERFAMILY SSF101904 533 848 1.83E-114 T 22-04-2016 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 Gene3D G3DSA:2.120.10.90 531 839 7.9E-144 T 22-04-2016 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 PANTHER PTHR10169 450 812 0.0 T 22-04-2016 YPTB_RS06935 a2eb61004c8c8b5851f442807fa91919 897 PANTHER PTHR10169 2 418 0.0 T 22-04-2016 YPTB_RS14310 d2e52256087bdf789a86516fe165474c 254 PANTHER PTHR30035 1 252 2.7E-122 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPTB_RS14310 d2e52256087bdf789a86516fe165474c 254 Pfam PF04333 MlaA lipoprotein 31 224 1.1E-65 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPTB_RS14310 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 101 118 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPTB_RS14310 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 140 157 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPTB_RS14310 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 32 45 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPTB_RS14310 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 50 66 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPTB_RS14310 d2e52256087bdf789a86516fe165474c 254 PANTHER PTHR30035:SF3 1 252 2.7E-122 T 22-04-2016 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 Gene3D G3DSA:3.40.50.1360 77 216 2.4E-7 T 22-04-2016 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 PANTHER PTHR30363:SF8 2 254 1.2E-173 T 22-04-2016 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 57 6.7E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 SUPERFAMILY SSF100950 76 235 1.57E-24 T 22-04-2016 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 PANTHER PTHR30363 2 254 1.2E-173 T 22-04-2016 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 SMART SM00420 8 57 6.2E-9 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 Gene3D G3DSA:1.10.10.10 3 43 1.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 1.2E-47 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 SMART SM01134 75 236 4.0E-63 T 22-04-2016 YPTB_RS07480 232a916130d0ffa02510ea202116d3c6 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPTB_RS14510 5d1bb9a0b220143f566b323bf8774e98 560 Pfam PF00691 OmpA family 441 539 1.6E-17 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS14510 5d1bb9a0b220143f566b323bf8774e98 560 SUPERFAMILY SSF103088 440 547 1.7E-27 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS14510 5d1bb9a0b220143f566b323bf8774e98 560 PANTHER PTHR30128 439 560 9.7E-46 T 22-04-2016 YPTB_RS14510 5d1bb9a0b220143f566b323bf8774e98 560 Gene3D G3DSA:3.30.1330.60 441 547 3.4E-29 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS14510 5d1bb9a0b220143f566b323bf8774e98 560 PRINTS PR01021 OMPA domain signature 489 505 1.3E-5 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS14510 5d1bb9a0b220143f566b323bf8774e98 560 PRINTS PR01021 OMPA domain signature 474 489 1.3E-5 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 513 2.5E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 SMART SM00319 44 180 5.1E-30 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 5.3E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 5.3E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 5.3E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 5.3E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 5.3E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 5.3E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 5.3E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 Pfam PF02203 Tar ligand binding domain homologue 1 170 3.2E-51 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 Gene3D G3DSA:1.10.287.950 282 486 3.7E-62 T 22-04-2016 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 SUPERFAMILY SSF47170 38 178 1.44E-41 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 SMART SM00283 267 514 5.0E-96 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PANTHER PTHR32089:SF48 1 517 1.2E-193 T 22-04-2016 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 SMART SM00304 214 266 2.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 SUPERFAMILY SSF58104 234 515 9.16E-74 T 22-04-2016 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 Gene3D G3DSA:1.20.120.30 36 179 5.5E-46 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 Pfam PF00672 HAMP domain 197 261 7.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS13060 f0f6f04ee4f5376e857e5642d111dedc 536 PANTHER PTHR32089 1 517 1.2E-193 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 PANTHER PTHR30006:SF10 5 197 7.1E-136 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 PANTHER PTHR30006:SF10 215 355 7.1E-136 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 PANTHER PTHR30006 5 197 7.1E-136 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 PANTHER PTHR30006 215 355 7.1E-136 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 Gene3D G3DSA:3.40.190.10 141 297 9.8E-18 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 Gene3D G3DSA:3.40.190.10 1 136 5.1E-22 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 Gene3D G3DSA:3.40.190.10 298 345 5.1E-22 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 SUPERFAMILY SSF53850 34 338 1.38E-41 T 22-04-2016 YPTB_RS11045 61a92c8b2d55ce2ba8e7599605effeba 360 Pfam PF13416 Bacterial extracellular solute-binding protein 54 331 4.3E-29 T 22-04-2016 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 SUPERFAMILY SSF56935 23 360 3.43E-81 T 22-04-2016 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 153 175 1.9E-69 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 1.9E-69 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 1.9E-69 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 1.9E-69 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 267 286 1.9E-69 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 1.9E-69 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 Pfam PF00267 Gram-negative porin 28 360 1.8E-141 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 Gene3D G3DSA:2.40.160.10 23 360 2.1E-104 T 22-04-2016 IPR023614 Porin domain YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PANTHER PTHR34501 3 360 1.3E-259 T 22-04-2016 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 3.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 3.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 3.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 3.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 312 329 3.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 312 328 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site YPTB_RS07920 33f723434f099bfd3d62789d317589c1 360 PANTHER PTHR34501:SF4 3 360 1.3E-259 T 22-04-2016 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF01479 S4 domain 97 143 7.0E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 PANTHER PTHR11831 1 206 3.1E-95 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 PANTHER PTHR11831:SF4 1 206 3.1E-95 T 22-04-2016 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM00363 96 160 8.2E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.6E-86 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.196 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM01390 3 95 6.1E-50 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 8.9E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:3.10.290.10 102 190 2.7E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 SUPERFAMILY SSF55174 3 206 6.54E-72 T 22-04-2016 YPTB_RS19895 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:1.10.1050.10 1 101 9.6E-42 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YPTB_RS01715 987fcb341d4faabb33c9be90e6187b06 224 Gene3D G3DSA:3.20.20.70 15 216 1.0E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS01715 987fcb341d4faabb33c9be90e6187b06 224 Pfam PF02581 Thiamine monophosphate synthase/TENI 30 198 8.3E-55 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPTB_RS01715 987fcb341d4faabb33c9be90e6187b06 224 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 31 211 2.9E-56 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPTB_RS01715 987fcb341d4faabb33c9be90e6187b06 224 PANTHER PTHR20857 11 216 2.0E-72 T 22-04-2016 YPTB_RS01715 987fcb341d4faabb33c9be90e6187b06 224 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 216 19.947 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPTB_RS01715 987fcb341d4faabb33c9be90e6187b06 224 SUPERFAMILY SSF51391 14 216 2.88E-63 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 PANTHER PTHR10168:SF85 4 81 7.9E-46 T 22-04-2016 YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 Gene3D G3DSA:3.40.30.10 4 81 1.2E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 PANTHER PTHR10168 4 81 7.9E-46 T 22-04-2016 YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.1E-50 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 Pfam PF00462 Glutaredoxin 4 69 1.7E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 3 21 4.5E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 52 65 4.5E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 66 79 4.5E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS07505 b36cbd6ee036dff2759a3de2cd9d447d 87 SUPERFAMILY SSF52833 4 81 6.26E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 Gene3D G3DSA:1.10.1060.10 24 108 5.4E-16 T 22-04-2016 YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 SUPERFAMILY SSF46548 26 104 7.85E-16 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 79 90 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 32 43 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 PANTHER PTHR32479 22 426 9.9E-210 T 22-04-2016 YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 Pfam PF02754 Cysteine-rich domain 186 272 3.5E-14 T 22-04-2016 IPR004017 Cysteine-rich domain YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 Pfam PF02754 Cysteine-rich domain 328 411 1.3E-13 T 22-04-2016 IPR004017 Cysteine-rich domain YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 Pfam PF13183 4Fe-4S dicluster domain 29 93 9.9E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 26 430 5.4E-231 T 22-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 YPTB_RS01265 d8a7b7f2757607186f2b4dc67a7245e1 431 PANTHER PTHR32479:SF9 22 426 9.9E-210 T 22-04-2016 YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 SUPERFAMILY SSF54211 10 169 4.93E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 Gene3D G3DSA:3.30.230.10 5 161 1.5E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 SUPERFAMILY SSF52540 189 502 2.98E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 Gene3D G3DSA:3.40.50.300 190 387 1.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 3.7E-30 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 2.1E-89 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 SMART SM00382 210 390 7.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 PANTHER PTHR32039:SF7 1 504 3.5E-266 T 22-04-2016 IPR004482 Mg chelatase-related protein YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.3E-45 T 22-04-2016 YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 PANTHER PTHR32039 1 504 3.5E-266 T 22-04-2016 YPTB_RS00825 12e0bcebb30803863d29c9a3205ac0dc 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 8.7E-213 T 22-04-2016 IPR004482 Mg chelatase-related protein YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Gene3D G3DSA:3.30.450.20 253 376 1.4E-23 T 22-04-2016 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Gene3D G3DSA:3.30.450.20 13 124 1.1E-19 T 22-04-2016 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Gene3D G3DSA:3.30.450.20 381 519 4.2E-24 T 22-04-2016 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00267 521 692 8.8E-54 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 390 2.9E-16 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 399 528 5.0E-15 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 262 8.2E-21 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 133 1.6E-17 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 PANTHER PTHR24423:SF544 16 269 1.3E-41 T 22-04-2016 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SUPERFAMILY SSF55785 123 250 1.74E-24 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SUPERFAMILY SSF55785 24 136 1.61E-19 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 PANTHER PTHR24423 16 269 1.3E-41 T 22-04-2016 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 688 5.2E-44 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Gene3D G3DSA:3.30.450.20 125 252 5.4E-25 T 22-04-2016 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SUPERFAMILY SSF55785 380 519 2.79E-20 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 691 2.9E-42 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SUPERFAMILY SSF55073 537 690 2.28E-44 T 22-04-2016 IPR029787 Nucleotide cyclase YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Gene3D G3DSA:3.30.70.270 534 691 3.6E-50 T 22-04-2016 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Pfam PF00989 PAS fold 403 518 6.6E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Pfam PF13426 PAS domain 151 254 3.6E-13 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Pfam PF13426 PAS domain 280 382 1.2E-8 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 Pfam PF13426 PAS domain 24 126 8.1E-11 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00091 267 335 1.2 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00091 11 80 4.1E-5 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00091 139 208 6.4E-4 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00091 402 468 1.3E-8 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SUPERFAMILY SSF55785 251 377 1.92E-25 T 22-04-2016 IPR000014 PAS domain YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00086 85 127 7.1 T 22-04-2016 IPR001610 PAC motif YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00086 213 255 0.33 T 22-04-2016 IPR001610 PAC motif YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00086 341 383 0.021 T 22-04-2016 IPR001610 PAC motif YPTB_RS08980 1db25a4636bd47ec4979167a2855dc3c 693 SMART SM00086 479 521 54.0 T 22-04-2016 IPR001610 PAC motif YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 88 767 51.215 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 SUPERFAMILY SSF53448 266 553 6.08E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 PANTHER PTHR10587:SF63 489 764 3.9E-151 T 22-04-2016 YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 PANTHER PTHR10587:SF63 171 440 3.9E-151 T 22-04-2016 YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 PANTHER PTHR10587 489 764 3.9E-151 T 22-04-2016 YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 PANTHER PTHR10587 171 440 3.9E-151 T 22-04-2016 YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 Gene3D G3DSA:3.90.550.10 283 411 2.5E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS13550 5401d3c0d6496bdb3b7ed60ea7f665e8 869 Pfam PF00535 Glycosyl transferase family 2 268 450 8.1E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPTB_RS04015 aa96e6bfafc83feea27d1c3fa7da943c 295 PANTHER PTHR12715 1 292 1.5E-156 T 22-04-2016 YPTB_RS04015 aa96e6bfafc83feea27d1c3fa7da943c 295 SUPERFAMILY SSF103481 45 139 1.44E-7 T 22-04-2016 YPTB_RS04015 aa96e6bfafc83feea27d1c3fa7da943c 295 PANTHER PTHR12715:SF7 1 292 1.5E-156 T 22-04-2016 YPTB_RS04015 aa96e6bfafc83feea27d1c3fa7da943c 295 Pfam PF00892 EamA-like transporter family 157 284 5.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS04015 aa96e6bfafc83feea27d1c3fa7da943c 295 SUPERFAMILY SSF103481 188 289 2.03E-12 T 22-04-2016 YPTB_RS04990 38c0f930007cacccac215f177d26c7ac 261 Pfam PF03466 LysR substrate binding domain 54 209 3.1E-6 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS04990 38c0f930007cacccac215f177d26c7ac 261 Gene3D G3DSA:1.10.10.10 2 41 3.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04990 38c0f930007cacccac215f177d26c7ac 261 PANTHER PTHR30126:SF13 1 209 7.9E-54 T 22-04-2016 YPTB_RS04990 38c0f930007cacccac215f177d26c7ac 261 SUPERFAMILY SSF53850 59 213 1.13E-7 T 22-04-2016 YPTB_RS04990 38c0f930007cacccac215f177d26c7ac 261 PANTHER PTHR30126 1 209 7.9E-54 T 22-04-2016 YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 SMART SM00862 152 228 2.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 Gene3D G3DSA:1.10.10.10 129 230 2.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 SMART SM00448 2 111 7.7E-47 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.1E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 Gene3D G3DSA:3.40.50.2300 2 125 8.5E-42 T 22-04-2016 YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 PANTHER PTHR26402:SF117 2 231 2.7E-81 T 22-04-2016 YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 Pfam PF00072 Response regulator receiver domain 4 112 9.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 SUPERFAMILY SSF52172 1 188 6.55E-42 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS00450 0fc2f049b776239777b1db8eeb885724 232 PANTHER PTHR26402 2 231 2.7E-81 T 22-04-2016 YPTB_RS19660 328851187847c7673e82c6aca08887de 146 SUPERFAMILY SSF160719 30 137 5.23E-17 T 22-04-2016 YPTB_RS19660 328851187847c7673e82c6aca08887de 146 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 141 2.6E-38 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein YPTB_RS19660 328851187847c7673e82c6aca08887de 146 Gene3D G3DSA:3.10.450.40 26 135 7.8E-11 T 22-04-2016 YPTB_RS19660 328851187847c7673e82c6aca08887de 146 Pfam PF04965 Gene 25-like lysozyme 34 120 1.3E-17 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 SUPERFAMILY SSF101790 276 360 2.29E-24 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:2.40.30.110 278 361 1.1E-27 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 4.2E-19 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 PIRSF PIRSF006487 1 363 8.7E-82 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:3.30.1360.120 144 231 3.5E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:3.30.1360.120 3 53 3.5E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:3.30.70.1400 54 137 2.2E-33 T 22-04-2016 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 1.9E-152 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 SUPERFAMILY SSF103025 3 277 8.63E-93 T 22-04-2016 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 6.3E-84 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 PANTHER PTHR13847:SF5 5 353 1.8E-64 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.796 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPTB_RS17240 bb2ef0d9bee1015c42a59176b321659e 365 PANTHER PTHR13847 5 353 1.8E-64 T 22-04-2016 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.5E-20 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 Gene3D G3DSA:1.20.5.1030 64 123 3.1E-25 T 22-04-2016 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 PANTHER PTHR33910:SF1 1 126 5.0E-35 T 22-04-2016 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE YPTB_RS01650 26470275fe3fceca384061a7b166f1cc 127 PANTHER PTHR33910 1 126 5.0E-35 T 22-04-2016 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.571 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 PIRSF PIRSF002144 1 92 1.9E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 Gene3D G3DSA:3.30.860.10 1 91 2.9E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 SUPERFAMILY SSF54570 3 84 5.75E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 YPTB_RS19995 b809f598f80073bab3bc75627b009ce4 92 PANTHER PTHR11880 1 91 5.6E-57 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 SUPERFAMILY SSF53187 292 373 2.16E-64 T 22-04-2016 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 SUPERFAMILY SSF53187 5 178 2.16E-64 T 22-04-2016 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 Gene3D G3DSA:3.40.630.10 5 187 2.6E-73 T 22-04-2016 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 Gene3D G3DSA:3.40.630.10 316 374 2.6E-73 T 22-04-2016 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.284 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 Gene3D G3DSA:3.30.70.360 188 288 4.0E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 PANTHER PTHR11014 4 374 5.6E-99 T 22-04-2016 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.0E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 7.2E-44 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 SUPERFAMILY SSF55031 179 286 3.44E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.3E-176 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 YPTB_RS15035 f766d7fe3fb9ab487da6cbea82d3a892 375 PANTHER PTHR11014:SF106 4 374 5.6E-99 T 22-04-2016 YPTB_RS09665 a953b57bc876402ef0527a6c0e6b08a7 67 Pfam PF05489 Phage Tail Protein X 1 57 6.4E-28 T 22-04-2016 IPR008861 Phage Tail Protein X-like YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 Pfam PF00005 ABC transporter 28 184 3.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 PIRSF PIRSF037116 1 263 6.8E-142 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 PANTHER PTHR24220:SF554 13 263 1.3E-145 T 22-04-2016 YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 9 261 1.9E-119 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 SMART SM00382 36 234 3.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 PANTHER PTHR24220 13 263 1.3E-145 T 22-04-2016 YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 SUPERFAMILY SSF52540 7 259 7.52E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS02920 11da46f1f940e3306fb441929fafa033 263 Gene3D G3DSA:3.40.50.300 10 258 2.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 498 9.0E-95 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 295 311 2.4E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 151 171 2.4E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 335 354 2.4E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 450 468 2.4E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 268 287 2.4E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 405 426 2.4E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 248 267 2.4E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PIRSF PIRSF006615 1 499 5.7E-203 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PANTHER PTHR34217 1 499 4.7E-274 T 22-04-2016 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 PANTHER PTHR34217:SF1 1 499 4.7E-274 T 22-04-2016 YPTB_RS12175 39bcb80b7f37b72033f68620cbf5a938 499 SUPERFAMILY SSF55486 3 499 1.22E-123 T 22-04-2016 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 PIRSF PIRSF004491 1 310 3.5E-103 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 SUPERFAMILY SSF82114 174 307 1.68E-43 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 SMART SM00904 183 307 3.0E-62 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 Gene3D G3DSA:3.40.50.620 1 187 1.8E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 PANTHER PTHR22749 1 308 3.6E-146 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 7.8E-113 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 SUPERFAMILY SSF52374 15 175 1.69E-36 T 22-04-2016 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 Gene3D G3DSA:2.40.30.30 188 307 1.8E-38 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 Pfam PF06574 FAD synthetase 12 167 4.2E-57 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 51 2.0E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 PANTHER PTHR22749:SF0 1 308 3.6E-146 T 22-04-2016 YPTB_RS03470 90b74a7072744f89f5dc3984a0d65eb3 312 Pfam PF01687 Riboflavin kinase 184 306 1.6E-37 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YPTB_RS20215 c8233c93a7e44f555caa08fc37de2137 394 Gene3D G3DSA:1.20.1250.20 207 380 5.4E-13 T 22-04-2016 YPTB_RS20215 c8233c93a7e44f555caa08fc37de2137 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.798 T 22-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA YPTB_RS20215 c8233c93a7e44f555caa08fc37de2137 394 Pfam PF07690 Major Facilitator Superfamily 15 321 2.6E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS20215 c8233c93a7e44f555caa08fc37de2137 394 PANTHER PTHR23514 1 389 1.2E-106 T 22-04-2016 YPTB_RS20215 c8233c93a7e44f555caa08fc37de2137 394 Gene3D G3DSA:1.20.1250.20 6 181 6.2E-15 T 22-04-2016 YPTB_RS20215 c8233c93a7e44f555caa08fc37de2137 394 SUPERFAMILY SSF103473 4 389 9.55E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS20215 c8233c93a7e44f555caa08fc37de2137 394 PANTHER PTHR23514:SF3 1 389 1.2E-106 T 22-04-2016 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Pfam PF00593 TonB dependent receptor 396 623 5.3E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 PANTHER PTHR30069 1 607 0.0 T 22-04-2016 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 624 35.335 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 151 4.3E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Gene3D G3DSA:2.170.130.10 32 154 1.5E-41 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 PANTHER PTHR30069:SF10 1 607 0.0 T 22-04-2016 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 3 624 4.8E-224 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Gene3D G3DSA:2.40.170.20 155 624 1.9E-90 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 SUPERFAMILY SSF56935 32 624 1.25E-122 T 22-04-2016 YPTB_RS00750 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 607 624 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 PANTHER PTHR11236:SF22 1 513 5.8E-280 T 22-04-2016 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 Pfam PF00425 chorismate binding enzyme 242 502 6.1E-85 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 PANTHER PTHR11236 1 513 5.8E-280 T 22-04-2016 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 7.9E-16 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 Gene3D G3DSA:3.60.120.10 7 516 1.9E-162 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 1.4E-241 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 PIRSF PIRSF001373 1 520 5.8E-250 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11645 1d20c912d67c88f77d724cce593408d3 520 SUPERFAMILY SSF56322 8 515 2.75E-165 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 Pfam PF00593 TonB dependent receptor 507 740 1.6E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 SUPERFAMILY SSF56935 74 742 5.49E-88 T 22-04-2016 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 SUPERFAMILY SSF56935 34 45 5.49E-88 T 22-04-2016 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 PANTHER PTHR32552 74 742 0.0 T 22-04-2016 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 PANTHER PTHR32552 1 45 0.0 T 22-04-2016 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 Gene3D G3DSA:2.40.170.20 199 742 2.8E-87 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 Gene3D G3DSA:2.170.130.10 34 195 7.5E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 84 742 1.9E-153 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 PANTHER PTHR32552:SF14 74 742 0.0 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 PANTHER PTHR32552:SF14 1 45 0.0 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 83 175 5.9E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS08985 3ea414c1d96552164e161b388d986303 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPTB_RS13950 b2137f688e87ceb40f20c18a033b5ff4 434 PANTHER PTHR30032 250 418 6.9E-103 T 22-04-2016 YPTB_RS13950 b2137f688e87ceb40f20c18a033b5ff4 434 PANTHER PTHR30032 28 230 6.9E-103 T 22-04-2016 YPTB_RS13950 b2137f688e87ceb40f20c18a033b5ff4 434 Gene3D G3DSA:3.20.20.80 132 265 4.9E-6 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS13950 b2137f688e87ceb40f20c18a033b5ff4 434 PANTHER PTHR30032:SF2 250 418 6.9E-103 T 22-04-2016 YPTB_RS13950 b2137f688e87ceb40f20c18a033b5ff4 434 PANTHER PTHR30032:SF2 28 230 6.9E-103 T 22-04-2016 YPTB_RS13950 b2137f688e87ceb40f20c18a033b5ff4 434 SUPERFAMILY SSF51445 70 376 5.02E-32 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS13950 b2137f688e87ceb40f20c18a033b5ff4 434 Pfam PF02638 Glycosyl hydrolase-like 10 43 377 3.9E-102 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 YPTB_RS09750 a120d0c45a49489ee10bcf8e1adb4522 423 SUPERFAMILY SSF52540 313 421 1.38E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09750 a120d0c45a49489ee10bcf8e1adb4522 423 SUPERFAMILY SSF52540 1 161 1.38E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09750 a120d0c45a49489ee10bcf8e1adb4522 423 Pfam PF13175 AAA ATPase domain 16 405 9.8E-24 T 22-04-2016 YPTB_RS09750 a120d0c45a49489ee10bcf8e1adb4522 423 Gene3D G3DSA:3.40.50.300 16 78 1.6E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09750 a120d0c45a49489ee10bcf8e1adb4522 423 Gene3D G3DSA:3.40.50.300 158 407 1.6E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04060 6a8227795c136e3b9081d4988c6d9938 437 Pfam PF01522 Polysaccharide deacetylase 243 381 1.7E-18 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS04060 6a8227795c136e3b9081d4988c6d9938 437 PANTHER PTHR34216 129 431 6.1E-124 T 22-04-2016 YPTB_RS04060 6a8227795c136e3b9081d4988c6d9938 437 Gene3D G3DSA:3.20.20.370 215 387 1.6E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS04060 6a8227795c136e3b9081d4988c6d9938 437 PANTHER PTHR34216:SF1 129 431 6.1E-124 T 22-04-2016 YPTB_RS04060 6a8227795c136e3b9081d4988c6d9938 437 SUPERFAMILY SSF88713 207 403 9.08E-29 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS10855 e44461a72030c5adb1857a1a5790ae8c 552 Gene3D G3DSA:1.25.40.10 416 465 3.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10855 e44461a72030c5adb1857a1a5790ae8c 552 Gene3D G3DSA:1.25.40.10 83 252 3.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10855 e44461a72030c5adb1857a1a5790ae8c 552 SUPERFAMILY SSF48452 66 255 2.04E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 PANTHER PTHR11751 85 465 1.4E-200 T 22-04-2016 YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:3.40.640.10 145 346 1.0E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Pfam PF00155 Aminotransferase class I and II 146 446 3.4E-28 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:3.90.1150.10 347 467 7.5E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.2E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SUPERFAMILY SSF46785 1 70 6.61E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:1.10.10.10 2 67 6.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SUPERFAMILY SSF53383 60 468 3.13E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SMART SM00345 7 66 5.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10740 328ad5a8fdb51ba9f638ddeee74f7cc6 473 PANTHER PTHR11751:SF314 85 465 1.4E-200 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 542 562 1.8E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 266 286 9.9E-9 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 427 447 1.6E-6 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Pfam PF05658 Head domain of trimeric autotransporter adhesin 365 391 1.3E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Pfam PF05658 Head domain of trimeric autotransporter adhesin 206 232 4.0E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 SUPERFAMILY SSF101967 314 450 7.98E-19 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 SUPERFAMILY SSF101967 144 289 7.98E-21 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 PANTHER PTHR35843:SF2 2 361 3.5E-94 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Gene3D G3DSA:3.30.1300.30 560 665 2.1E-29 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Pfam PF03895 YadA-like C-terminal region 591 665 1.2E-19 T 22-04-2016 IPR005594 YadA-like, C-terminal YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 SUPERFAMILY SSF54523 554 665 4.24E-24 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 PANTHER PTHR35843:SF2 382 665 3.5E-94 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Gene3D G3DSA:2.150.10.10 146 288 2.0E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Gene3D G3DSA:2.150.10.10 475 559 1.6E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 Gene3D G3DSA:2.150.10.10 289 450 3.9E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 PANTHER PTHR35843 2 361 3.5E-94 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 PANTHER PTHR35843 382 665 3.5E-94 T 22-04-2016 YPTB_RS17215 9c25baba3fc264e679a6ec4b5c4382d0 665 SUPERFAMILY SSF101967 475 565 8.24E-20 T 22-04-2016 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 PANTHER PTHR30175 1 466 2.3E-272 T 22-04-2016 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 Gene3D G3DSA:3.30.1360.60 6 83 2.2E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 PANTHER PTHR30175:SF4 1 466 2.3E-272 T 22-04-2016 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 SUPERFAMILY SSF55604 10 81 3.27E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 2.8E-211 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 7.9E-16 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 Pfam PF00367 phosphotransferase system, EIIB 11 41 6.4E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS19135 975e9ccf61a1713767e9d69f0266b18f 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 2.5E-33 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPTB_RS14335 f547a3b3627e15553c14402ede9d2916 164 PANTHER PTHR34128:SF1 2 162 2.5E-78 T 22-04-2016 YPTB_RS14335 f547a3b3627e15553c14402ede9d2916 164 PANTHER PTHR34128 2 162 2.5E-78 T 22-04-2016 YPTB_RS14335 f547a3b3627e15553c14402ede9d2916 164 Gene3D G3DSA:2.40.50.140 26 131 3.6E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS14335 f547a3b3627e15553c14402ede9d2916 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.157 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YPTB_RS14335 f547a3b3627e15553c14402ede9d2916 164 Pfam PF03100 CcmE 4 137 1.0E-44 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YPTB_RS14335 f547a3b3627e15553c14402ede9d2916 164 SUPERFAMILY SSF82093 30 143 3.27E-41 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YPTB_RS04680 5565edec86bfc43d6dbc973239766659 120 SUPERFAMILY SSF69754 3 107 1.57E-31 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS04680 5565edec86bfc43d6dbc973239766659 120 PANTHER PTHR33231 1 117 1.7E-74 T 22-04-2016 YPTB_RS04680 5565edec86bfc43d6dbc973239766659 120 PANTHER PTHR33231:SF3 1 117 1.7E-74 T 22-04-2016 YPTB_RS04680 5565edec86bfc43d6dbc973239766659 120 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.6E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS04680 5565edec86bfc43d6dbc973239766659 120 Gene3D G3DSA:3.30.160.100 3 91 1.2E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS04680 5565edec86bfc43d6dbc973239766659 120 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.0E-20 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 Gene3D G3DSA:1.10.287.130 201 267 7.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PANTHER PTHR24423 6 101 3.7E-144 T 22-04-2016 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PANTHER PTHR24423 152 428 3.7E-144 T 22-04-2016 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 Pfam PF00672 HAMP domain 141 206 6.5E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 Gene3D G3DSA:3.30.565.10 273 425 1.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 3.0E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 SUPERFAMILY SSF55874 260 423 2.49E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 SUPERFAMILY SSF47384 194 271 1.49E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 SMART SM00387 315 425 2.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 SMART SM00304 158 210 1.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 422 1.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 SMART SM00388 211 271 2.1E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PANTHER PTHR24423:SF564 6 101 3.7E-144 T 22-04-2016 YPTB_RS12170 2cb7418d58f3549fd5dea207f7147ca1 434 PANTHER PTHR24423:SF564 152 428 3.7E-144 T 22-04-2016 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 Pfam PF01026 TatD related DNase 4 255 1.9E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 PANTHER PTHR10060 1 258 7.4E-140 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 SUPERFAMILY SSF51556 1 259 6.43E-86 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 Gene3D G3DSA:3.20.20.140 2 257 9.4E-85 T 22-04-2016 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 4.3E-92 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 PIRSF PIRSF005902 1 259 9.0E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS13395 5d84072c28e831e740c7f984a2cdbe1b 269 PANTHER PTHR10060:SF20 1 258 7.4E-140 T 22-04-2016 YPTB_RS06010 cbc4f6f64d86c39c8ec90cb00addf3da 85 PANTHER PTHR33162:SF2 1 72 4.7E-46 T 22-04-2016 YPTB_RS06010 cbc4f6f64d86c39c8ec90cb00addf3da 85 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 85 31.842 T 22-04-2016 IPR024905 Sec-independent protein translocase protein TatE YPTB_RS06010 cbc4f6f64d86c39c8ec90cb00addf3da 85 PANTHER PTHR33162 1 72 4.7E-46 T 22-04-2016 YPTB_RS06010 cbc4f6f64d86c39c8ec90cb00addf3da 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.1E-18 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPTB_RS06010 cbc4f6f64d86c39c8ec90cb00addf3da 85 Pfam PF02416 mttA/Hcf106 family 4 61 1.2E-12 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YPTB_RS06010 cbc4f6f64d86c39c8ec90cb00addf3da 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 18.54 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPTB_RS12940 7bbec0af1547f46428c9fd2d89e4a6bb 165 Pfam PF13185 GAF domain 39 147 3.3E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPTB_RS12940 7bbec0af1547f46428c9fd2d89e4a6bb 165 SUPERFAMILY SSF55781 2 151 1.32E-39 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS12940 7bbec0af1547f46428c9fd2d89e4a6bb 165 Gene3D G3DSA:3.30.450.40 2 145 1.0E-46 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS12940 7bbec0af1547f46428c9fd2d89e4a6bb 165 PANTHER PTHR21021 5 140 2.5E-54 T 22-04-2016 YPTB_RS08610 26b69e83fc4fa513f763804699ea5b55 331 PANTHER PTHR32196:SF21 2 331 1.0E-121 T 22-04-2016 YPTB_RS08610 26b69e83fc4fa513f763804699ea5b55 331 PANTHER PTHR32196 2 331 1.0E-121 T 22-04-2016 YPTB_RS08610 26b69e83fc4fa513f763804699ea5b55 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 322 9.6E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.844 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 SMART SM01400 4 121 5.7E-76 T 22-04-2016 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 6.2E-127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 PANTHER PTHR10210:SF41 2 315 2.2E-189 T 22-04-2016 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 PANTHER PTHR10210 2 315 2.2E-189 T 22-04-2016 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 160 285 3.4E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 SUPERFAMILY SSF53271 69 306 2.5E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.1E-30 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPTB_RS10970 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 2 159 1.2E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 60.146 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.30.1600.10 55 94 9.9E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.30.1600.10 147 191 9.9E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 SUPERFAMILY SSF52467 41 267 1.37E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 Pfam PF02146 Sir2 family 46 219 1.7E-50 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.40.50.1220 104 146 8.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.40.50.1220 198 264 8.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.40.50.1220 38 54 8.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS13260 8a2e0d013fb43cb2e1fc91339f919712 278 PANTHER PTHR11085 41 262 4.7E-81 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 YPTB_RS10845 4773a046e71b561e2884bcffbdb1898e 395 Gene3D G3DSA:3.40.50.2000 23 264 5.8E-11 T 22-04-2016 YPTB_RS10845 4773a046e71b561e2884bcffbdb1898e 395 SUPERFAMILY SSF53756 16 377 3.77E-54 T 22-04-2016 YPTB_RS10845 4773a046e71b561e2884bcffbdb1898e 395 Gene3D G3DSA:3.40.50.2000 265 381 1.2E-14 T 22-04-2016 YPTB_RS10845 4773a046e71b561e2884bcffbdb1898e 395 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 264 374 8.4E-6 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS06795 9218b962581f6daff23a36ef6a802381 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 9.2E-27 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 YPTB_RS06795 9218b962581f6daff23a36ef6a802381 157 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 2.6E-25 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 YPTB_RS06795 9218b962581f6daff23a36ef6a802381 157 PANTHER PTHR37805 1 156 7.9E-85 T 22-04-2016 YPTB_RS06795 9218b962581f6daff23a36ef6a802381 157 PANTHER PTHR37805:SF1 1 156 7.9E-85 T 22-04-2016 YPTB_RS03285 8c999195f7b1f03527afaa4f84623feb 425 Pfam PF07670 Nucleoside recognition 99 195 4.4E-9 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS03285 8c999195f7b1f03527afaa4f84623feb 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 7.1E-23 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS03285 8c999195f7b1f03527afaa4f84623feb 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 1.5E-75 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS03285 8c999195f7b1f03527afaa4f84623feb 425 PANTHER PTHR10590 4 422 2.2E-217 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS03285 8c999195f7b1f03527afaa4f84623feb 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 422 8.1E-154 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS18540 1c21f0d867e1bb2dc0ea6a6fef55c0b2 238 Gene3D G3DSA:3.40.30.10 37 83 2.5E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS18540 1c21f0d867e1bb2dc0ea6a6fef55c0b2 238 Gene3D G3DSA:3.40.30.10 198 236 2.5E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS18540 1c21f0d867e1bb2dc0ea6a6fef55c0b2 238 Gene3D G3DSA:1.10.472.60 84 197 2.9E-40 T 22-04-2016 IPR023169 UPF0413, central domain YPTB_RS18540 1c21f0d867e1bb2dc0ea6a6fef55c0b2 238 SUPERFAMILY SSF52833 31 236 9.01E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 SUPERFAMILY SSF53383 28 398 1.21E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 Gene3D G3DSA:3.40.640.10 11 263 2.2E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 399 9.9E-168 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 PIRSF PIRSF001434 2 400 4.9E-114 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 PANTHER PTHR11808 4 401 1.3E-282 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 Gene3D G3DSA:3.90.1150.10 264 399 6.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 397 8.9E-111 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS18285 e6465be51941e8a0b2e2fd71386a75d4 403 PANTHER PTHR11808:SF45 4 401 1.3E-282 T 22-04-2016 YPTB_RS13225 d77ce8c2a30afceac3c53d8bab2f3371 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 4.0E-105 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPTB_RS13225 d77ce8c2a30afceac3c53d8bab2f3371 208 PANTHER PTHR38100 2 208 5.3E-105 T 22-04-2016 YPTB_RS13225 d77ce8c2a30afceac3c53d8bab2f3371 208 Gene3D G3DSA:1.10.3890.10 2 207 1.5E-87 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPTB_RS13225 d77ce8c2a30afceac3c53d8bab2f3371 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 1.6E-77 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPTB_RS13225 d77ce8c2a30afceac3c53d8bab2f3371 208 SUPERFAMILY SSF101322 2 207 2.88E-82 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPTB_RS13225 d77ce8c2a30afceac3c53d8bab2f3371 208 PANTHER PTHR38100:SF1 2 208 5.3E-105 T 22-04-2016 YPTB_RS13225 d77ce8c2a30afceac3c53d8bab2f3371 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.962 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPTB_RS16055 cd03bf5325680cbede5df96b86fee7dd 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 47 244 2.3E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPTB_RS16055 cd03bf5325680cbede5df96b86fee7dd 253 SUPERFAMILY SSF56219 36 251 3.27E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPTB_RS16055 cd03bf5325680cbede5df96b86fee7dd 253 Gene3D G3DSA:3.60.10.10 36 252 1.4E-6 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 418 40.79 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 Gene3D G3DSA:3.40.605.10 4 222 1.2E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 Gene3D G3DSA:3.40.605.10 377 417 1.2E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 PANTHER PTHR11063:SF8 1 419 1.4E-190 T 22-04-2016 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 PIRSF PIRSF000151 1 419 3.9E-171 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 408 8.6E-185 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 SUPERFAMILY SSF53720 4 414 3.4E-111 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 Pfam PF00171 Aldehyde dehydrogenase family 6 282 1.8E-13 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 PANTHER PTHR11063 1 419 1.4E-190 T 22-04-2016 YPTB_RS05025 23fd135e90142bf68af7c9c9fede3b94 419 Gene3D G3DSA:3.40.309.10 225 376 2.1E-38 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.7E-111 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 SUPERFAMILY SSF55666 153 237 1.27E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 1.6E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.2E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 PANTHER PTHR11953:SF0 1 237 3.2E-88 T 22-04-2016 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 Gene3D G3DSA:3.30.230.70 9 237 9.5E-35 T 22-04-2016 IPR027408 PNPase/RNase PH domain YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 PANTHER PTHR11953 1 237 3.2E-88 T 22-04-2016 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.607 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 SUPERFAMILY SSF54211 1 181 6.58E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS00305 f240eaba6b87a5a28847c019df81a221 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 PIRSF PIRSF000505 2 428 1.1E-153 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 424 9.5E-142 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.441 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 PANTHER PTHR21090 3 425 1.4E-218 T 22-04-2016 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 Gene3D G3DSA:3.65.10.10 23 238 1.6E-67 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 Gene3D G3DSA:3.65.10.10 239 423 1.4E-73 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 420 5.3E-153 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPTB_RS07810 f04fc7621f2e8ae3262c5660d1237198 428 SUPERFAMILY SSF55205 4 424 6.32E-145 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 PANTHER PTHR11135 1 304 6.2E-153 T 22-04-2016 YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 Pfam PF04055 Radical SAM superfamily 43 202 7.4E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 2.1E-133 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 SUPERFAMILY SSF102114 13 254 6.41E-45 T 22-04-2016 YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 PANTHER PTHR11135:SF1 1 304 6.2E-153 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 Gene3D G3DSA:3.80.30.20 23 238 8.5E-33 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 Pfam PF16199 Radical_SAM C-terminal domain 208 281 3.5E-18 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension YPTB_RS18955 74449291f77437e0b2380e4176fcc083 307 SMART SM00729 23 247 1.5E-39 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS12955 d7ac4c99a1f640006063cf0fc2a8c1ae 184 PANTHER PTHR37089:SF4 1 184 5.2E-96 T 22-04-2016 YPTB_RS12955 d7ac4c99a1f640006063cf0fc2a8c1ae 184 SMART SM00972 121 181 5.4E-16 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS12955 d7ac4c99a1f640006063cf0fc2a8c1ae 184 PANTHER PTHR37089 1 184 5.2E-96 T 22-04-2016 YPTB_RS12955 d7ac4c99a1f640006063cf0fc2a8c1ae 184 Pfam PF05229 Spore Coat Protein U domain 27 181 6.3E-30 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 Gene3D G3DSA:2.150.10.10 232 380 2.6E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 PANTHER PTHR36921 1 444 3.1E-157 T 22-04-2016 YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 SMART SM00235 45 224 3.4E-17 T 22-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 357 379 0.0015 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 PIRSF PIRSF001205 6 438 5.1E-123 T 22-04-2016 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 Gene3D G3DSA:3.40.390.10 34 225 1.8E-39 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 SUPERFAMILY SSF51120 226 436 1.16E-34 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 Pfam PF08548 Peptidase M10 serralysin C terminal 224 437 6.4E-86 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 YPTB_RS20625 714d84f532b4437350fe4575d4816fee 444 SUPERFAMILY SSF55486 30 222 8.56E-52 T 22-04-2016 YPTB_RS15730 bde2e9e43c9bae060670bfca0085fbd2 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 233 7.6E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPTB_RS15730 bde2e9e43c9bae060670bfca0085fbd2 247 PANTHER PTHR13799 1 243 8.9E-88 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPTB_RS15730 bde2e9e43c9bae060670bfca0085fbd2 247 SUPERFAMILY SSF102705 1 246 8.11E-83 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPTB_RS15730 bde2e9e43c9bae060670bfca0085fbd2 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 8.3E-70 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPTB_RS15730 bde2e9e43c9bae060670bfca0085fbd2 247 Gene3D G3DSA:3.40.1390.30 1 107 7.8E-38 T 22-04-2016 YPTB_RS15730 bde2e9e43c9bae060670bfca0085fbd2 247 Gene3D G3DSA:3.40.1390.30 108 214 4.4E-28 T 22-04-2016 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594 370 571 2.3E-258 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594 1 296 2.3E-258 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.888 T 22-04-2016 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55681 420 583 2.4E-103 T 22-04-2016 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55681 108 287 2.4E-103 T 22-04-2016 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55261 288 419 2.4E-45 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:2.40.50.140 1 106 2.4E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF50249 1 105 2.67E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594:SF5 370 571 2.3E-258 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594:SF5 1 296 2.3E-258 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 4.1E-273 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 9.0E-18 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.930.10 131 275 3.2E-112 T 22-04-2016 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.930.10 414 584 3.2E-112 T 22-04-2016 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.5E-107 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.1360.30 276 413 1.8E-47 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF02938 GAD domain 307 406 3.0E-30 T 22-04-2016 IPR029351 GAD domain YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11165 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 Gene3D G3DSA:2.40.50.100 239 285 9.7E-20 T 22-04-2016 YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 Gene3D G3DSA:2.40.50.100 346 359 9.7E-20 T 22-04-2016 YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 SMART SM00382 28 211 6.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 Pfam PF00005 ABC transporter 19 161 4.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 PANTHER PTHR24220:SF572 5 247 2.5E-180 T 22-04-2016 YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 SUPERFAMILY SSF52540 4 243 1.58E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 Pfam PF08402 TOBE domain 281 352 5.9E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 Gene3D G3DSA:2.40.50.140 286 345 1.0E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 SUPERFAMILY SSF50331 236 358 6.32E-28 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 Gene3D G3DSA:3.40.50.300 3 236 4.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16780 415d16a9a0a6cdcfc6537c466633e842 368 PANTHER PTHR24220 5 247 2.5E-180 T 22-04-2016 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF52283 7 135 8.72E-49 T 22-04-2016 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 7.7E-37 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF55021 338 412 1.59E-19 T 22-04-2016 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF51735 108 295 2.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.30.70.260 324 412 4.4E-29 T 22-04-2016 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 PANTHER PTHR10996 1 370 3.1E-247 T 22-04-2016 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF01842 ACT domain 347 404 9.2E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.40.50.720 120 297 4.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 4.1E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.40.50.720 8 119 5.7E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 PANTHER PTHR10996:SF18 1 370 3.1E-247 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB_RS17275 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS14620 93073811fce8a5b3985d266f1434d9c1 323 Hamap MF_00524 Glucokinase [glk]. 2 316 39.586 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YPTB_RS14620 93073811fce8a5b3985d266f1434d9c1 323 TIGRFAM TIGR00749 glk: glucokinase 6 310 7.1E-139 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YPTB_RS14620 93073811fce8a5b3985d266f1434d9c1 323 PANTHER PTHR30514 1 320 5.9E-124 T 22-04-2016 YPTB_RS14620 93073811fce8a5b3985d266f1434d9c1 323 Gene3D G3DSA:3.40.367.20 100 299 2.6E-77 T 22-04-2016 YPTB_RS14620 93073811fce8a5b3985d266f1434d9c1 323 SUPERFAMILY SSF53067 4 318 1.02E-64 T 22-04-2016 YPTB_RS14620 93073811fce8a5b3985d266f1434d9c1 323 Pfam PF02685 Glucokinase 6 315 2.2E-126 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YPTB_RS14620 93073811fce8a5b3985d266f1434d9c1 323 PANTHER PTHR30514:SF0 1 320 5.9E-124 T 22-04-2016 YPTB_RS02670 87933ac9b489c0a4c758a509db6351d7 328 PANTHER PTHR22911:SF55 3 328 8.6E-187 T 22-04-2016 YPTB_RS02670 87933ac9b489c0a4c758a509db6351d7 328 SUPERFAMILY SSF103481 43 147 1.26E-14 T 22-04-2016 YPTB_RS02670 87933ac9b489c0a4c758a509db6351d7 328 PANTHER PTHR22911 3 328 8.6E-187 T 22-04-2016 YPTB_RS02670 87933ac9b489c0a4c758a509db6351d7 328 Pfam PF00892 EamA-like transporter family 161 273 2.3E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS02670 87933ac9b489c0a4c758a509db6351d7 328 Pfam PF00892 EamA-like transporter family 9 144 1.4E-28 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 PRINTS PR00969 Pili chaperone signature 126 141 2.5E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 PRINTS PR00969 Pili chaperone signature 72 93 2.5E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 PRINTS PR00969 Pili chaperone signature 166 181 2.5E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 PRINTS PR00969 Pili chaperone signature 23 32 2.5E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 PRINTS PR00969 Pili chaperone signature 100 117 2.5E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 Gene3D G3DSA:2.60.40.1070 149 236 7.2E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 144 4.6E-43 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 Gene3D G3DSA:2.60.40.360 23 144 7.7E-45 T 22-04-2016 IPR008962 PapD-like YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 234 5.8E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 SUPERFAMILY SSF49354 18 144 7.85E-42 T 22-04-2016 IPR008962 PapD-like YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 SUPERFAMILY SSF49584 152 243 4.97E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 PANTHER PTHR30251:SF2 3 244 1.6E-75 T 22-04-2016 YPTB_RS14465 36dc1a86451dd47381f4b430c03ed739 253 PANTHER PTHR30251 3 244 1.6E-75 T 22-04-2016 YPTB_RS03000 41bd6a1c7adf5a82fd3548e07a07ae74 167 SUPERFAMILY SSF55729 9 167 7.72E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS03000 41bd6a1c7adf5a82fd3548e07a07ae74 167 PANTHER PTHR13947:SF7 1 167 1.6E-58 T 22-04-2016 YPTB_RS03000 41bd6a1c7adf5a82fd3548e07a07ae74 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 7.3E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS03000 41bd6a1c7adf5a82fd3548e07a07ae74 167 Gene3D G3DSA:3.40.630.30 10 167 3.9E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS03000 41bd6a1c7adf5a82fd3548e07a07ae74 167 PANTHER PTHR13947 1 167 1.6E-58 T 22-04-2016 YPTB_RS03255 8c7b3332eb91e56a2a436faef2c2c78a 147 SUPERFAMILY SSF55729 3 145 2.74E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS03255 8c7b3332eb91e56a2a436faef2c2c78a 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 1.4E-44 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 YPTB_RS03255 8c7b3332eb91e56a2a436faef2c2c78a 147 Gene3D G3DSA:3.40.630.30 3 145 1.6E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS03255 8c7b3332eb91e56a2a436faef2c2c78a 147 PANTHER PTHR23091:SF247 3 146 1.8E-35 T 22-04-2016 YPTB_RS03255 8c7b3332eb91e56a2a436faef2c2c78a 147 PANTHER PTHR23091 3 146 1.8E-35 T 22-04-2016 YPTB_RS03255 8c7b3332eb91e56a2a436faef2c2c78a 147 Pfam PF00583 Acetyltransferase (GNAT) family 49 120 2.5E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS19150 8c8f2f814ecf1c5303e73918ea04ae38 128 Pfam PF07361 Cytochrome b562 25 128 5.6E-32 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPTB_RS19150 8c8f2f814ecf1c5303e73918ea04ae38 128 SUPERFAMILY SSF47175 23 128 5.18E-36 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPTB_RS19150 8c8f2f814ecf1c5303e73918ea04ae38 128 PIRSF PIRSF000029 1 128 1.8E-60 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPTB_RS19150 8c8f2f814ecf1c5303e73918ea04ae38 128 Gene3D G3DSA:1.20.120.10 23 128 4.3E-40 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 PANTHER PTHR24078:SF231 1 350 1.2E-175 T 22-04-2016 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF49493 115 169 4.32E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF49493 213 262 4.32E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF57938 134 211 4.32E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 25 40 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 62 81 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 7 25 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 42 62 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:1.10.287.110 1 105 1.9E-36 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 PANTHER PTHR24078 1 350 1.2E-175 T 22-04-2016 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Pfam PF00684 DnaJ central domain 147 207 4.3E-16 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.10.230.10 141 210 1.1E-26 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.60.260.20 256 333 2.1E-24 T 22-04-2016 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF46565 1 108 1.96E-34 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.60.260.20 211 254 1.4E-21 T 22-04-2016 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.60.260.20 107 140 1.4E-21 T 22-04-2016 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Pfam PF00226 DnaJ domain 5 67 5.9E-26 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.797 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 Pfam PF01556 DnaJ C terminal domain 121 333 3.8E-46 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 1.6E-143 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF49493 259 344 3.53E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YPTB_RS03445 91a67e16c6c31a434d097d9eef272ab9 379 SMART SM00271 4 62 4.5E-26 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS20140 2f16dd88e834b348af7d922a63c95801 200 Pfam PF01810 LysE type translocator 16 178 5.4E-15 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS20140 2f16dd88e834b348af7d922a63c95801 200 PANTHER PTHR30086 1 190 9.1E-93 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS20140 2f16dd88e834b348af7d922a63c95801 200 PANTHER PTHR30086:SF12 1 190 9.1E-93 T 22-04-2016 YPTB_RS03100 07fe504eae44674083d7e57354a71e1e 96 PANTHER PTHR33336 1 96 6.7E-58 T 22-04-2016 YPTB_RS03100 07fe504eae44674083d7e57354a71e1e 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.9E-15 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YPTB_RS03100 07fe504eae44674083d7e57354a71e1e 96 SUPERFAMILY SSF54909 1 91 6.19E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS03100 07fe504eae44674083d7e57354a71e1e 96 PANTHER PTHR33336:SF1 1 96 6.7E-58 T 22-04-2016 YPTB_RS03100 07fe504eae44674083d7e57354a71e1e 96 Gene3D G3DSA:3.30.70.900 1 90 5.5E-27 T 22-04-2016 YPTB_RS11020 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS11020 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPTB_RS11020 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS11020 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPTB_RS11020 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS11020 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS03495 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS03495 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPTB_RS03495 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS03495 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPTB_RS03495 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS03495 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS08545 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS08545 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPTB_RS08545 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS08545 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPTB_RS08545 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS08545 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS17340 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS17340 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPTB_RS17340 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS17340 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPTB_RS17340 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS17340 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 SUPERFAMILY SSF53850 29 368 3.51E-102 T 22-04-2016 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 Gene3D G3DSA:3.40.190.10 43 141 5.8E-12 T 22-04-2016 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PANTHER PTHR30222 18 369 2.7E-172 T 22-04-2016 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PIRSF PIRSF019574 1 369 3.6E-142 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 PANTHER PTHR30222:SF11 18 369 2.7E-172 T 22-04-2016 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 4.9E-33 T 22-04-2016 YPTB_RS07525 fe686d400499aa0d8655e7f2650be2ce 369 Gene3D G3DSA:3.40.190.10 142 317 5.9E-75 T 22-04-2016 YPTB_RS03920 f2ed23e8ed18bc2d47cc3826de5af644 68 PANTHER PTHR36150 3 64 4.0E-28 T 22-04-2016 YPTB_RS03920 f2ed23e8ed18bc2d47cc3826de5af644 68 PANTHER PTHR36150:SF1 3 64 4.0E-28 T 22-04-2016 YPTB_RS03920 f2ed23e8ed18bc2d47cc3826de5af644 68 SUPERFAMILY SSF57716 5 63 1.71E-21 T 22-04-2016 YPTB_RS03920 f2ed23e8ed18bc2d47cc3826de5af644 68 Pfam PF03884 Domain of unknown function (DUF329) 8 58 1.1E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YPTB_RS03920 f2ed23e8ed18bc2d47cc3826de5af644 68 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.968 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YPTB_RS03920 f2ed23e8ed18bc2d47cc3826de5af644 68 Gene3D G3DSA:3.30.50.10 2 63 4.2E-27 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 YPTB_RS13450 7f3eaee928b008b8c80fd81346c2a94d 55 SUPERFAMILY SSF57829 2 54 1.04E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YPTB_RS13450 7f3eaee928b008b8c80fd81346c2a94d 55 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YPTB_RS13450 7f3eaee928b008b8c80fd81346c2a94d 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.225 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YPTB_RS13450 7f3eaee928b008b8c80fd81346c2a94d 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 PANTHER PTHR26402:SF524 2 115 1.3E-38 T 22-04-2016 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 Pfam PF04397 LytTr DNA-binding domain 143 235 9.9E-25 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 SUPERFAMILY SSF52172 1 124 9.82E-33 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 SMART SM00448 2 112 1.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 Gene3D G3DSA:2.20.25.10 213 237 4.0E-6 T 22-04-2016 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 Pfam PF00072 Response regulator receiver domain 4 112 6.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 Gene3D G3DSA:3.40.50.2300 1 117 2.2E-32 T 22-04-2016 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 PANTHER PTHR26402 2 115 1.3E-38 T 22-04-2016 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 SMART SM00850 142 236 4.1E-23 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YPTB_RS04660 e682c36e033d0b7238ea76bff9ce134b 238 Gene3D G3DSA:2.40.50.40 134 198 4.9E-13 T 22-04-2016 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 SUPERFAMILY SSF90123 21 318 3.53E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 Pfam PF00664 ABC transporter transmembrane region 37 286 8.4E-15 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 PANTHER PTHR24222:SF29 10 585 0.0 T 22-04-2016 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 Gene3D G3DSA:1.20.1560.10 25 317 4.0E-35 T 22-04-2016 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 SUPERFAMILY SSF52540 326 572 1.52E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 Pfam PF00005 ABC transporter 350 502 9.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 PANTHER PTHR24222 10 585 0.0 T 22-04-2016 YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 Gene3D G3DSA:3.40.50.300 333 577 8.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17800 de8765dc13a60309a7f2f99382ec2194 585 SMART SM00382 358 556 4.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04460 72fdfbf990e399e08e17887d40b0df9f 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 5.5E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS04460 72fdfbf990e399e08e17887d40b0df9f 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.7E-127 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 YPTB_RS04460 72fdfbf990e399e08e17887d40b0df9f 231 PANTHER PTHR22789 1 231 5.0E-172 T 22-04-2016 YPTB_RS04460 72fdfbf990e399e08e17887d40b0df9f 231 PANTHER PTHR22789:SF7 1 231 5.0E-172 T 22-04-2016 YPTB_RS04460 72fdfbf990e399e08e17887d40b0df9f 231 Gene3D G3DSA:3.40.225.10 2 231 5.9E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS04460 72fdfbf990e399e08e17887d40b0df9f 231 SMART SM01007 7 198 4.7E-65 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS04460 72fdfbf990e399e08e17887d40b0df9f 231 SUPERFAMILY SSF53639 1 223 1.94E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 SMART SM01329 29 413 1.3E-180 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 1.8E-234 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 4.5E-116 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 SUPERFAMILY SSF53659 4 417 1.69E-148 T 22-04-2016 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835 189 256 1.1E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835 276 417 1.1E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835 1 165 1.1E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835:SF52 189 256 1.1E-245 T 22-04-2016 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835:SF52 276 417 1.1E-245 T 22-04-2016 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835:SF52 1 165 1.1E-245 T 22-04-2016 YPTB_RS13205 252d6e8fc421241b257bc9a14720b319 417 Gene3D G3DSA:3.40.718.10 12 417 1.9E-167 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 SUPERFAMILY SSF81343 3 129 3.05E-34 T 22-04-2016 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 PANTHER PTHR10978:SF4 3 129 3.9E-79 T 22-04-2016 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 PANTHER PTHR10978 3 129 3.9E-79 T 22-04-2016 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 PIRSF PIRSF000178 2 129 7.0E-32 T 22-04-2016 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 4.2E-39 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 4.4E-29 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 Gene3D G3DSA:1.20.1300.10 3 129 1.2E-41 T 22-04-2016 YPTB_RS06320 83d9049de0a350535a62e1a4492ec766 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 PANTHER PTHR21631 3 435 8.9E-180 T 22-04-2016 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 Gene3D G3DSA:3.20.20.60 6 418 4.6E-172 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 PIRSF PIRSF001362 1 435 8.1E-225 T 22-04-2016 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 Pfam PF00463 Isocitrate lyase family 9 256 9.3E-63 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 Pfam PF00463 Isocitrate lyase family 258 435 4.9E-50 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 SUPERFAMILY SSF51621 5 435 7.63E-156 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 2.4E-89 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPTB_RS19765 290ea0be5623584736e0b8c2b5428fe4 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 1.6E-116 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 Gene3D G3DSA:3.20.20.120 117 319 7.0E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 SMART SM00922 130 223 6.4E-17 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 PANTHER PTHR13794:SF60 4 321 1.4E-146 T 22-04-2016 YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 SUPERFAMILY SSF51604 118 319 4.19E-52 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 Gene3D G3DSA:3.30.390.10 1 100 9.9E-39 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 Pfam PF13378 Enolase C-terminal domain-like 136 320 2.2E-23 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 109 4.5E-13 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 PANTHER PTHR13794 4 321 1.4E-146 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 YPTB_RS12320 c5126cdc45a4694a0df6d99c2af0354b 324 SUPERFAMILY SSF54826 3 109 5.5E-27 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 SUPERFAMILY SSF56935 60 681 6.96E-86 T 22-04-2016 YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 Gene3D G3DSA:2.40.170.20 176 681 1.0E-65 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 Pfam PF00593 TonB dependent receptor 440 680 1.3E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 PANTHER PTHR32552 6 681 0.0 T 22-04-2016 YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 75 681 1.6E-246 T 22-04-2016 IPR010100 TonB-dependent copper receptor YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 86 173 1.8E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 Gene3D G3DSA:2.170.130.10 86 175 9.5E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS20210 f064709a3dfeb6660b55131bc25e4d62 681 PANTHER PTHR32552:SF12 6 681 0.0 T 22-04-2016 YPTB_RS15970 e563a6f4787aff14989ee4e53d439fde 111 Gene3D G3DSA:3.30.920.30 2 61 2.1E-4 T 22-04-2016 YPTB_RS15970 e563a6f4787aff14989ee4e53d439fde 111 SUPERFAMILY SSF159894 1 111 1.33E-56 T 22-04-2016 YPTB_RS15970 e563a6f4787aff14989ee4e53d439fde 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 1.7E-54 T 22-04-2016 IPR018994 Protein of unknown function DUF2002 YPTB_RS10380 9c0b186622967185de5a65ca01d03fab 241 PANTHER PTHR10108:SF809 4 234 8.7E-12 T 22-04-2016 YPTB_RS10380 9c0b186622967185de5a65ca01d03fab 241 PIRSF PIRSF006325 1 240 5.9E-51 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPTB_RS10380 9c0b186622967185de5a65ca01d03fab 241 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 2 241 29.675 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPTB_RS10380 9c0b186622967185de5a65ca01d03fab 241 PANTHER PTHR10108 4 234 8.7E-12 T 22-04-2016 YPTB_RS10380 9c0b186622967185de5a65ca01d03fab 241 Gene3D G3DSA:3.40.50.150 17 240 3.6E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10380 9c0b186622967185de5a65ca01d03fab 241 SUPERFAMILY SSF53335 17 236 2.96E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10380 9c0b186622967185de5a65ca01d03fab 241 Pfam PF13649 Methyltransferase domain 58 153 9.3E-11 T 22-04-2016 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 SMART SM00530 74 128 1.3E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511:SF3 59 132 1.4E-52 T 22-04-2016 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511:SF3 3 31 1.4E-52 T 22-04-2016 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 Gene3D G3DSA:1.10.260.40 75 126 8.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 SUPERFAMILY SSF47413 64 127 3.07E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 48 2.6E-15 T 22-04-2016 IPR022453 Zinc finger, MqsA-type YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 2 132 3.7E-61 T 22-04-2016 IPR032758 Antitoxin MqsA/igA-2 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 4 132 2.0E-43 T 22-04-2016 IPR022452 Antitoxin MqsA YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511 59 132 1.4E-52 T 22-04-2016 YPTB_RS16905 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511 3 31 1.4E-52 T 22-04-2016 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 Gene3D G3DSA:2.60.120.10 288 390 3.1E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PANTHER PTHR10309 1 374 2.0E-142 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 SUPERFAMILY SSF51182 1 377 4.05E-103 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 Pfam PF01238 Phosphomannose isomerase type I 1 355 1.9E-100 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PIRSF PIRSF001480 1 391 4.6E-108 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 382 1.3E-119 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 3.2E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 Gene3D G3DSA:2.60.120.10 238 273 7.1E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 Gene3D G3DSA:2.60.120.10 6 140 7.1E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 Gene3D G3DSA:1.10.441.10 274 287 5.8E-23 T 22-04-2016 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 Gene3D G3DSA:1.10.441.10 141 231 5.8E-23 T 22-04-2016 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 PANTHER PTHR10309:SF0 1 374 2.0E-142 T 22-04-2016 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS11930 1ca73252967cb35adbcb29f704d1a20d 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 PANTHER PTHR32552:SF22 1 676 0.0 T 22-04-2016 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 4.5E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 44 676 3.7E-155 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 Gene3D G3DSA:2.40.170.20 162 676 1.9E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 SUPERFAMILY SSF56935 44 676 2.31E-98 T 22-04-2016 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 44 676 2.1E-197 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 22-04-2016 IPR010916 TonB box, conserved site YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 Gene3D G3DSA:2.170.130.10 44 161 2.8E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 PANTHER PTHR32552 1 676 0.0 T 22-04-2016 YPTB_RS02000 2866c47e5abfbb9bc609bb09f1922411 676 Pfam PF00593 TonB dependent receptor 429 675 4.7E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 Pfam PF00072 Response regulator receiver domain 7 118 3.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 SMART SM00421 146 203 1.3E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 PANTHER PTHR26402:SF458 5 209 6.2E-104 T 22-04-2016 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 Gene3D G3DSA:3.40.50.2300 3 145 6.4E-40 T 22-04-2016 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.9E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 SUPERFAMILY SSF46894 129 207 4.08E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 SMART SM00448 5 118 4.0E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 SUPERFAMILY SSF52172 4 136 1.99E-35 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 Gene3D G3DSA:1.10.10.10 146 206 9.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14975 9e86a45d9e947a3f940d44d702785045 209 PANTHER PTHR26402 5 209 6.2E-104 T 22-04-2016 YPTB_RS03025 b77e344472656a6feb9b421dcf1452d6 358 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 356 5.0E-139 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 YPTB_RS03025 b77e344472656a6feb9b421dcf1452d6 358 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 356 2.7E-74 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 YPTB_RS03025 b77e344472656a6feb9b421dcf1452d6 358 PANTHER PTHR33529:SF1 1 358 3.4E-178 T 22-04-2016 YPTB_RS03025 b77e344472656a6feb9b421dcf1452d6 358 PANTHER PTHR33529 1 358 3.4E-178 T 22-04-2016 YPTB_RS16320 95ded84fba72e736f936e074e1bb7057 368 PANTHER PTHR37524 1 361 2.2E-236 T 22-04-2016 YPTB_RS16320 95ded84fba72e736f936e074e1bb7057 368 PANTHER PTHR37524:SF2 1 361 2.2E-236 T 22-04-2016 YPTB_RS16320 95ded84fba72e736f936e074e1bb7057 368 PIRSF PIRSF028774 2 361 6.0E-194 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YPTB_RS16320 95ded84fba72e736f936e074e1bb7057 368 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 2 356 85.448 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YPTB_RS16320 95ded84fba72e736f936e074e1bb7057 368 SUPERFAMILY SSF53335 185 289 1.77E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS16320 95ded84fba72e736f936e074e1bb7057 368 Gene3D G3DSA:3.40.50.150 185 315 1.4E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS16320 95ded84fba72e736f936e074e1bb7057 368 Pfam PF01728 FtsJ-like methyltransferase 187 281 3.5E-7 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 TIGRFAM TIGR02082 metH: methionine synthase 18 1196 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 SUPERFAMILY SSF47644 657 743 5.36E-28 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 SUPERFAMILY SSF56507 907 1230 2.22E-133 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 SUPERFAMILY SSF52242 748 898 5.1E-46 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 SUPERFAMILY SSF82282 12 404 9.81E-115 T 22-04-2016 IPR003726 Homocysteine-binding domain YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 PANTHER PTHR21091:SF111 1 407 1.2E-165 T 22-04-2016 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Pfam PF02310 B12 binding domain 752 844 9.4E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 SMART SM01018 661 744 5.7E-43 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Gene3D G3DSA:3.10.196.10 961 1230 6.3E-115 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 SUPERFAMILY SSF51717 361 635 1.01E-87 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Gene3D G3DSA:3.20.20.330 7 368 1.6E-124 T 22-04-2016 IPR003726 Homocysteine-binding domain YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Pfam PF00809 Pterin binding enzyme 365 603 2.1E-61 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Gene3D G3DSA:3.20.20.20 369 641 1.1E-113 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Pfam PF02607 B12 binding domain 664 737 1.6E-23 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Gene3D G3DSA:3.40.50.280 749 899 1.1E-64 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 PANTHER PTHR21091 1 407 1.2E-165 T 22-04-2016 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 PIRSF PIRSF000381 6 1199 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Gene3D G3DSA:1.10.1240.10 655 741 1.9E-38 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1212 8.8E-124 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPTB_RS19750 67e5652791315a7597cdeb165a967128 1231 Pfam PF02574 Homocysteine S-methyltransferase 22 330 1.1E-90 T 22-04-2016 IPR003726 Homocysteine-binding domain YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 Gene3D G3DSA:3.90.1140.10 13 185 4.5E-50 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 Pfam PF02834 LigT like Phosphoesterase 100 173 1.5E-6 T 22-04-2016 IPR014051 Phosphoesterase, HXTX YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 Pfam PF02834 LigT like Phosphoesterase 19 96 2.6E-12 T 22-04-2016 IPR014051 Phosphoesterase, HXTX YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 SUPERFAMILY SSF55144 13 183 2.62E-44 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 PANTHER PTHR35561:SF1 1 183 9.3E-59 T 22-04-2016 YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 13 181 5.3E-37 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 12 181 21.543 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YPTB_RS04105 fcccbde9c3567efff5dd3b43e7b883cf 191 PANTHER PTHR35561 1 183 9.3E-59 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 PANTHER PTHR24095 15 519 4.1E-264 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.30.300.30 417 519 6.0E-26 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 Pfam PF00501 AMP-binding enzyme 21 422 2.9E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:2.30.38.10 341 416 8.7E-22 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 1.3E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 PANTHER PTHR24095:SF123 15 519 4.1E-264 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.40.50.980 16 178 2.8E-25 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 SUPERFAMILY SSF56801 10 518 6.67E-126 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.40.50.980 179 330 2.9E-37 T 22-04-2016 YPTB_RS08765 a5a207873243aed0db6eba4ea3176e91 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS11665 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 Pfam PF01300 Telomere recombination 23 198 1.3E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YPTB_RS11665 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 SUPERFAMILY SSF55821 1 203 1.86E-66 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPTB_RS11665 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 PANTHER PTHR17490:SF7 1 206 4.9E-106 T 22-04-2016 YPTB_RS11665 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 Gene3D G3DSA:3.90.870.10 2 203 5.0E-66 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPTB_RS11665 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 5.8E-74 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YPTB_RS11665 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 PANTHER PTHR17490 1 206 4.9E-106 T 22-04-2016 YPTB_RS12520 c4fbcc7cef3a456286145a71f42f8ffa 283 SUPERFAMILY SSF54001 146 277 6.38E-40 T 22-04-2016 YPTB_RS12520 c4fbcc7cef3a456286145a71f42f8ffa 283 Gene3D G3DSA:3.90.1720.10 145 278 1.7E-45 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS12520 c4fbcc7cef3a456286145a71f42f8ffa 283 Pfam PF00877 NlpC/P60 family 165 275 1.2E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS12520 c4fbcc7cef3a456286145a71f42f8ffa 283 PANTHER PTHR21666 156 277 6.8E-41 T 22-04-2016 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Pfam PF17203 Single cache domain 3 74 119 4.2E-7 T 22-04-2016 IPR033463 Single cache domain 3 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 SUPERFAMILY SSF55785 257 364 5.52E-14 T 22-04-2016 IPR000014 PAS domain YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Pfam PF00512 His Kinase A (phospho-acceptor) domain 372 432 3.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 SMART SM00388 370 436 8.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PANTHER PTHR24423 1 16 4.1E-91 T 22-04-2016 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PANTHER PTHR24423 233 587 4.1E-91 T 22-04-2016 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 583 1.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 SMART SM00387 478 585 1.0E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 582 4.0E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 4.0E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 563 4.0E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 4.0E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 SUPERFAMILY SSF55874 427 586 7.33E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Gene3D G3DSA:1.10.287.130 363 431 3.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 244 361 1.3E-12 T 22-04-2016 IPR000014 PAS domain YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Pfam PF00989 PAS fold 249 352 1.0E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 SMART SM00091 245 311 3.0E-7 T 22-04-2016 IPR000014 PAS domain YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 SUPERFAMILY SSF47384 363 433 4.51E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 SUPERFAMILY SSF103190 37 159 7.85E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Gene3D G3DSA:3.30.450.20 73 116 8.8E-5 T 22-04-2016 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Gene3D G3DSA:3.30.565.10 436 583 6.8E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 Gene3D G3DSA:3.30.450.20 237 351 1.4E-15 T 22-04-2016 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PANTHER PTHR24423:SF445 1 16 4.1E-91 T 22-04-2016 YPTB_RS06670 2632701444f07e953763f90bfbc3409c 604 PANTHER PTHR24423:SF445 233 587 4.1E-91 T 22-04-2016 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002:SF4 2 129 2.6E-220 T 22-04-2016 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002:SF4 146 403 2.6E-220 T 22-04-2016 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 SUPERFAMILY SSF46548 171 288 5.02E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 347 51.146 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 Pfam PF13484 4Fe-4S double cluster binding domain 224 288 7.7E-19 T 22-04-2016 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 380 4.5E-146 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002 2 129 2.6E-220 T 22-04-2016 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002 146 403 2.6E-220 T 22-04-2016 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 Pfam PF08331 Domain of unknown function (DUF1730) 62 128 2.0E-21 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 Gene3D G3DSA:3.30.70.20 222 290 2.7E-6 T 22-04-2016 YPTB_RS02430 8c0f4d594663a93bff63acf56c95fd88 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 SUPERFAMILY SSF53218 180 327 4.32E-43 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 PANTHER PTHR10192 1 421 3.6E-279 T 22-04-2016 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 SUPERFAMILY SSF63882 9 178 1.31E-54 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 PANTHER PTHR10192:SF11 1 421 3.6E-279 T 22-04-2016 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Gene3D G3DSA:3.40.980.10 166 330 1.3E-62 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Gene3D G3DSA:2.40.340.10 332 404 3.8E-34 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 3.2E-19 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 SUPERFAMILY SSF63867 330 410 1.7E-24 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Pfam PF00994 Probable molybdopterin binding domain 183 319 4.3E-26 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 9.8E-38 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Gene3D G3DSA:3.90.105.10 29 52 1.1E-19 T 22-04-2016 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Gene3D G3DSA:3.90.105.10 145 165 1.1E-19 T 22-04-2016 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 SMART SM00852 183 320 3.4E-43 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 Gene3D G3DSA:2.170.190.11 53 144 1.2E-30 T 22-04-2016 YPTB_RS08315 35b203a0d8ead5fff68f89220f13cba7 424 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 1.8E-32 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 SMART SM00739 109 136 4.4E-4 T 22-04-2016 IPR005824 KOW YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 PANTHER PTHR30265 1 161 1.1E-33 T 22-04-2016 YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 48.314 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 SMART SM00738 1 100 7.7E-32 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 2.4E-58 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 PANTHER PTHR30265:SF3 1 161 1.1E-33 T 22-04-2016 YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 SUPERFAMILY SSF82679 1 98 2.22E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 Pfam PF02357 Transcription termination factor nusG 2 95 1.7E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS01530 4e4ca19de7554aedd5499657ef4a7c13 162 Gene3D G3DSA:3.30.70.940 1 99 3.1E-16 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 SUPERFAMILY SSF52540 282 484 2.45E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 PANTHER PTHR24220 13 391 3.1E-287 T 22-04-2016 YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 PANTHER PTHR24220:SF555 13 391 3.1E-287 T 22-04-2016 IPR030281 Autoinducer 2 import ATP-binding protein LsrA GO:0005524|GO:0006810|GO:0016021|GO:0042626 KEGG: 00920+3.6.3.- YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 Pfam PF00005 ABC transporter 284 434 7.5E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 Pfam PF00005 ABC transporter 27 169 6.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 SUPERFAMILY SSF52540 10 228 1.96E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 SMART SM00382 291 483 2.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 SMART SM00382 36 224 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 Gene3D G3DSA:3.40.50.300 270 485 5.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03125 73c14879af734271212d41f3ad3d5578 527 Gene3D G3DSA:3.40.50.300 10 232 1.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 Gene3D G3DSA:1.10.3720.10 68 141 4.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 Gene3D G3DSA:1.10.3720.10 181 306 4.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 SUPERFAMILY SSF161098 69 138 3.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 SUPERFAMILY SSF161098 178 300 3.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465:SF65 1 147 4.1E-193 T 22-04-2016 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465:SF65 172 315 4.1E-193 T 22-04-2016 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 5.1E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465 1 147 4.1E-193 T 22-04-2016 YPTB_RS12390 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465 172 315 4.1E-193 T 22-04-2016 YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 SMART SM00382 26 213 8.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 PIRSF PIRSF039085 1 240 9.5E-110 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 SUPERFAMILY SSF52540 1 235 2.0E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 PANTHER PTHR24220 3 239 2.0E-158 T 22-04-2016 YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 Gene3D G3DSA:3.40.50.300 1 237 1.8E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 Pfam PF00005 ABC transporter 17 165 2.4E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS13845 e680de17c69c49f987945c1f81b3d323 240 PANTHER PTHR24220:SF569 3 239 2.0E-158 T 22-04-2016 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SUPERFAMILY SSF47226 5 124 1.7E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SUPERFAMILY SSF50341 572 704 9.68E-31 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 326 388 8.9E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Gene3D G3DSA:1.10.287.560 326 389 7.4E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 PANTHER PTHR22617 1 720 0.0 T 22-04-2016 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SUPERFAMILY SSF55052 180 243 2.59E-19 T 22-04-2016 IPR015162 CheY binding YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SUPERFAMILY SSF47384 326 389 3.06E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SUPERFAMILY SSF55874 391 571 4.71E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 PANTHER PTHR22617:SF20 1 720 0.0 T 22-04-2016 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Gene3D G3DSA:3.30.70.400 177 245 1.4E-29 T 22-04-2016 IPR015162 CheY binding YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Pfam PF01627 Hpt domain 7 102 2.2E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Gene3D G3DSA:1.20.120.160 3 139 4.2E-38 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 2.99E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 551 2.99E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 570 2.99E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 527 2.99E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SMART SM01231 325 388 2.0E-20 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SMART SM00073 3 100 2.7E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Gene3D G3DSA:3.30.565.10 390 572 4.1E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Gene3D G3DSA:2.30.30.40 573 594 1.4E-24 T 22-04-2016 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Gene3D G3DSA:2.30.30.40 661 704 1.4E-24 T 22-04-2016 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SMART SM00260 565 705 8.8E-42 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Pfam PF01584 CheW-like domain 578 704 1.3E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Pfam PF09078 CheY binding 181 243 1.1E-23 T 22-04-2016 IPR015162 CheY binding YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 572 4.9E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 Gene3D G3DSA:2.40.50.180 597 660 3.2E-13 T 22-04-2016 YPTB_RS13085 a5f948fb78154c265b8eac2faed75fe2 721 SMART SM00387 433 573 8.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.6E-160 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.033 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 4.7E-8 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 SUPERFAMILY SSF102114 53 316 1.7E-68 T 22-04-2016 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 PIRSF PIRSF005963 2 321 4.8E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 PANTHER PTHR10949 4 321 2.0E-186 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 SMART SM00729 84 293 1.2E-16 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 Gene3D G3DSA:3.20.20.70 55 312 3.9E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS06015 c11b031c550889f9fc70034d0cd85dd5 321 Pfam PF04055 Radical SAM superfamily 91 251 2.8E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS11305 841fda0af3d187b4c8677a30853dda55 361 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 63 360 8.2E-123 T 22-04-2016 IPR011970 Lytic murein transglycosylase YPTB_RS11305 841fda0af3d187b4c8677a30853dda55 361 SUPERFAMILY SSF53955 53 359 2.67E-96 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS11305 841fda0af3d187b4c8677a30853dda55 361 PANTHER PTHR30163 1 360 9.4E-163 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YPTB_RS11305 841fda0af3d187b4c8677a30853dda55 361 Pfam PF13406 Transglycosylase SLT domain 64 357 1.2E-105 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 YPTB_RS11305 841fda0af3d187b4c8677a30853dda55 361 PANTHER PTHR30163:SF2 1 360 9.4E-163 T 22-04-2016 YPTB_RS11305 841fda0af3d187b4c8677a30853dda55 361 Gene3D G3DSA:1.10.530.10 245 360 2.2E-56 T 22-04-2016 YPTB_RS11305 841fda0af3d187b4c8677a30853dda55 361 Gene3D G3DSA:1.10.530.10 108 164 2.2E-56 T 22-04-2016 YPTB_RS01135 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS01135 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPTB_RS01135 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS11470 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS11470 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPTB_RS11470 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS17915 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS17915 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPTB_RS17915 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS03945 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS03945 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPTB_RS03945 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS04315 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS04315 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPTB_RS04315 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS06650 2087a01f63ba93412a2f8c5bbb006f81 282 SUPERFAMILY SSF103481 30 131 1.28E-10 T 22-04-2016 YPTB_RS06650 2087a01f63ba93412a2f8c5bbb006f81 282 PANTHER PTHR12715:SF11 1 282 5.0E-70 T 22-04-2016 YPTB_RS06650 2087a01f63ba93412a2f8c5bbb006f81 282 SUPERFAMILY SSF103481 177 279 2.62E-5 T 22-04-2016 YPTB_RS06650 2087a01f63ba93412a2f8c5bbb006f81 282 Pfam PF00892 EamA-like transporter family 4 129 1.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS06650 2087a01f63ba93412a2f8c5bbb006f81 282 Pfam PF00892 EamA-like transporter family 145 277 1.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS06650 2087a01f63ba93412a2f8c5bbb006f81 282 PANTHER PTHR12715 1 282 5.0E-70 T 22-04-2016 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PIRSF PIRSF001400 1 429 1.2E-191 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SUPERFAMILY SSF51604 143 427 1.84E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Hamap MF_00318 Enolase [eno]. 2 416 44.11 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Gene3D G3DSA:3.20.20.120 128 428 1.0E-135 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Pfam PF03952 Enolase, N-terminal domain 4 134 2.0E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SMART SM01192 143 430 1.3E-212 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Gene3D G3DSA:3.30.390.10 3 126 1.2E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SUPERFAMILY SSF54826 3 138 3.16E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 3.0E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PANTHER PTHR11902 1 427 9.1E-275 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SMART SM01193 4 134 5.3E-93 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS04200 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.1E-139 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 PANTHER PTHR24220:SF408 26 277 2.4E-121 T 22-04-2016 YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 SMART SM00382 50 258 1.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 Pfam PF00005 ABC transporter 41 202 1.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 25 269 2.2E-91 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 Gene3D G3DSA:3.40.50.300 23 261 4.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 SUPERFAMILY SSF52540 24 261 1.45E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 PANTHER PTHR24220 26 277 2.4E-121 T 22-04-2016 YPTB_RS06775 5890e2ea2cc8bc3ae30004f061c29149 278 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS08000 2b2e469676390c734d470eee4b73bb4e 172 SUPERFAMILY SSF54637 3 169 4.97E-56 T 22-04-2016 IPR029069 HotDog domain YPTB_RS08000 2b2e469676390c734d470eee4b73bb4e 172 Gene3D G3DSA:3.10.129.10 2 169 1.0E-60 T 22-04-2016 IPR029069 HotDog domain YPTB_RS08000 2b2e469676390c734d470eee4b73bb4e 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.068 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPTB_RS08000 2b2e469676390c734d470eee4b73bb4e 172 Pfam PF07977 FabA-like domain 29 158 1.5E-52 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPTB_RS08000 2b2e469676390c734d470eee4b73bb4e 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.9E-93 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPTB_RS12000 c5508c1041a571656a4c9e0d1447a0a3 307 PANTHER PTHR32322:SF12 1 290 1.7E-154 T 22-04-2016 YPTB_RS12000 c5508c1041a571656a4c9e0d1447a0a3 307 SUPERFAMILY SSF103481 40 141 2.35E-13 T 22-04-2016 YPTB_RS12000 c5508c1041a571656a4c9e0d1447a0a3 307 Pfam PF00892 EamA-like transporter family 8 138 7.5E-25 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS12000 c5508c1041a571656a4c9e0d1447a0a3 307 Pfam PF00892 EamA-like transporter family 152 286 1.5E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS12000 c5508c1041a571656a4c9e0d1447a0a3 307 PANTHER PTHR32322 1 290 1.7E-154 T 22-04-2016 YPTB_RS12000 c5508c1041a571656a4c9e0d1447a0a3 307 SUPERFAMILY SSF103481 187 289 2.09E-5 T 22-04-2016 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 SUPERFAMILY SSF55347 149 312 4.17E-81 T 22-04-2016 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 9.7E-62 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.5E-137 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 Gene3D G3DSA:3.40.50.720 1 158 1.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 Gene3D G3DSA:3.30.360.10 159 314 2.9E-87 T 22-04-2016 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 SUPERFAMILY SSF51735 3 166 2.48E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.4E-71 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 SMART SM00846 3 150 6.0E-98 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 PIRSF PIRSF000149 1 331 9.2E-135 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS11405 c3114959fcab7998e8d9746134c6817c 331 PANTHER PTHR10836 1 331 4.7E-252 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 1.1E-160 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 Gene3D G3DSA:1.20.1270.20 159 232 4.7E-24 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 4.8E-250 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.695 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 Gene3D G3DSA:1.20.1270.20 1 158 7.0E-37 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 PIRSF PIRSF000076 1 550 3.1E-241 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 SUPERFAMILY SSF56821 1 549 3.51E-188 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 PANTHER PTHR30109:SF0 1 548 0.0 T 22-04-2016 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 Gene3D G3DSA:3.40.50.2030 380 547 3.6E-69 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 Gene3D G3DSA:3.40.50.2030 234 379 1.7E-64 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPTB_RS07660 e0433c2ba176a57cd63eea570cbaf217 550 PANTHER PTHR30109 1 548 0.0 T 22-04-2016 YPTB_RS14055 7cd0b571549645482009a07a901f4642 197 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 45.452 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 YPTB_RS14055 7cd0b571549645482009a07a901f4642 197 SMART SM00471 24 149 2.0E-7 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS14055 7cd0b571549645482009a07a901f4642 197 Pfam PF13023 HD domain 9 159 2.7E-18 T 22-04-2016 IPR006674 HD domain YPTB_RS14055 7cd0b571549645482009a07a901f4642 197 PANTHER PTHR11845 1 188 6.0E-50 T 22-04-2016 YPTB_RS14055 7cd0b571549645482009a07a901f4642 197 SUPERFAMILY SSF109604 2 191 1.86E-44 T 22-04-2016 YPTB_RS14055 7cd0b571549645482009a07a901f4642 197 Gene3D G3DSA:1.10.3210.10 2 192 2.0E-50 T 22-04-2016 IPR006674 HD domain YPTB_RS14055 7cd0b571549645482009a07a901f4642 197 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 174 3.0E-51 T 22-04-2016 YPTB_RS04875 1251de8564bec8b61f6bd2c9f5c5e51d 180 Gene3D G3DSA:2.60.120.10 5 179 5.5E-58 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS04875 1251de8564bec8b61f6bd2c9f5c5e51d 180 SUPERFAMILY SSF51182 4 178 4.16E-41 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS04875 1251de8564bec8b61f6bd2c9f5c5e51d 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.446 T 22-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 YPTB_RS04875 1251de8564bec8b61f6bd2c9f5c5e51d 180 Pfam PF03079 ARD/ARD' family 5 165 1.9E-34 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 YPTB_RS04875 1251de8564bec8b61f6bd2c9f5c5e51d 180 PANTHER PTHR23418 27 178 3.6E-34 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 YPTB_RS09935 2b16bf5b9ab7a8ce8ed5451cef232c8d 269 TIGRFAM TIGR02642 phage_xxxx: uncharacterized phage protein 1 268 1.8E-131 T 22-04-2016 IPR013464 Conserved hypothetical protein CHP02642 YPTB_RS09935 2b16bf5b9ab7a8ce8ed5451cef232c8d 269 SUPERFAMILY SSF57938 177 213 2.49E-6 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPTB_RS09935 2b16bf5b9ab7a8ce8ed5451cef232c8d 269 Gene3D G3DSA:2.10.230.10 178 210 9.5E-6 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 79 84 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 Gene3D G3DSA:2.40.10.10 53 166 1.1E-14 T 22-04-2016 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 Gene3D G3DSA:2.40.10.10 174 272 4.7E-8 T 22-04-2016 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 69 84 1.1E-6 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 141 155 1.1E-6 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 217 229 1.1E-6 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 SMART SM00020 43 275 0.0043 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 SUPERFAMILY SSF50494 33 271 3.53E-31 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 Pfam PF00089 Trypsin 47 244 1.2E-12 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 PANTHER PTHR15462 25 267 1.8E-61 T 22-04-2016 YPTB_RS12210 44309922b0884b46a14088fa87ab6a39 280 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 218 229 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 PANTHER PTHR11751 13 97 1.0E-58 T 22-04-2016 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 PANTHER PTHR11751:SF402 13 97 1.0E-58 T 22-04-2016 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 163.765 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 SUPERFAMILY SSF46785 11 87 2.65E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 SMART SM00345 12 71 1.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 SUPERFAMILY SSF48008 79 230 3.01E-66 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 Gene3D G3DSA:1.20.120.530 80 236 7.4E-66 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 Gene3D G3DSA:1.10.10.10 8 76 3.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 Pfam PF07840 FadR C-terminal domain 72 234 3.9E-74 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 YPTB_RS11350 2fb848b9bc1d3a681f33b86de2866633 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.5E-122 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 SUPERFAMILY SSF103473 250 422 2.49E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 SUPERFAMILY SSF103473 474 499 2.49E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 SUPERFAMILY SSF103473 10 195 2.49E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 6.9E-5 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 6.9E-5 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 6.9E-5 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 6.9E-5 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 Gene3D G3DSA:1.20.1250.20 475 500 2.4E-23 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 Gene3D G3DSA:1.20.1250.20 265 423 2.4E-23 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 4.3E-208 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 PANTHER PTHR23501 3 500 0.0 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 PANTHER PTHR23501:SF52 3 500 0.0 T 22-04-2016 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 Pfam PF07690 Major Facilitator Superfamily 18 412 5.2E-55 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS04770 a384938b7c56d3ed275f31e424c2f0d0 511 Gene3D G3DSA:1.20.1250.20 13 186 2.8E-30 T 22-04-2016 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 PANTHER PTHR38097 2 135 2.1E-102 T 22-04-2016 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 SMART SM00528 87 135 5.0E-23 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 SUPERFAMILY SSF81273 93 135 1.14E-11 T 22-04-2016 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 Gene3D G3DSA:1.10.287.1050 1 58 2.6E-32 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 PIRSF PIRSF002096 1 135 1.3E-56 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 Gene3D G3DSA:4.10.430.10 92 135 6.3E-25 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 SUPERFAMILY SSF81273 2 58 2.94E-18 T 22-04-2016 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 PANTHER PTHR38097:SF1 2 135 2.1E-102 T 22-04-2016 YPTB_RS11505 7e182e411284c5073c201b70d493c287 135 Pfam PF00816 H-NS histone family 32 127 2.5E-19 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 SMART SM00671 346 377 140.0 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 SMART SM00671 484 519 20.0 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 SMART SM00671 624 660 320.0 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 SMART SM00671 415 451 8.5 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 Pfam PF13226 Domain of unknown function (DUF4034) 31 308 7.6E-109 T 22-04-2016 IPR025115 Domain of unknown function DUF4034 YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 SUPERFAMILY SSF81901 343 519 8.02E-12 T 22-04-2016 YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 Gene3D G3DSA:1.25.40.10 409 522 5.1E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 Gene3D G3DSA:1.25.40.10 319 372 5.1E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10865 84e84286ff55e517c509a3a79d2b5f45 703 Gene3D G3DSA:1.25.40.10 602 661 5.1E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS17500 f3a4f140af3ba60d8d22e2784c05c629 319 Gene3D G3DSA:3.40.50.2300 26 140 2.7E-22 T 22-04-2016 YPTB_RS17500 f3a4f140af3ba60d8d22e2784c05c629 319 SUPERFAMILY SSF53822 23 314 3.62E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS17500 f3a4f140af3ba60d8d22e2784c05c629 319 Pfam PF13407 Periplasmic binding protein domain 27 290 1.2E-39 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS17500 f3a4f140af3ba60d8d22e2784c05c629 319 PANTHER PTHR32196 5 319 2.9E-100 T 22-04-2016 YPTB_RS17500 f3a4f140af3ba60d8d22e2784c05c629 319 PANTHER PTHR32196:SF9 5 319 2.9E-100 T 22-04-2016 YPTB_RS17500 f3a4f140af3ba60d8d22e2784c05c629 319 Gene3D G3DSA:3.40.50.2300 141 313 3.1E-42 T 22-04-2016 YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 Gene3D G3DSA:3.40.50.300 287 509 2.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 Gene3D G3DSA:3.40.50.300 19 260 9.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 PANTHER PTHR24220:SF538 22 401 1.7E-228 T 22-04-2016 YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 SUPERFAMILY SSF52540 21 252 1.57E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 PANTHER PTHR24220 22 401 1.7E-228 T 22-04-2016 YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 Pfam PF00005 ABC transporter 293 447 1.4E-12 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 Pfam PF00005 ABC transporter 36 192 3.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 SUPERFAMILY SSF52540 287 506 7.85E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS09285 cb5535260278c41d3a1129f55b272037 525 SMART SM00382 45 241 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 SUPERFAMILY SSF53474 9 282 2.48E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 PANTHER PTHR11614 1 305 5.5E-218 T 22-04-2016 YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 Pfam PF12147 Putative methyltransferase 276 583 2.0E-151 T 22-04-2016 IPR022744 Methyltransferase domain, putative YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 Pfam PF12146 Serine aminopeptidase, S33 32 268 8.1E-64 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 PANTHER PTHR11614:SF106 1 305 5.5E-218 T 22-04-2016 YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 Gene3D G3DSA:3.40.50.150 394 568 1.1E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 Gene3D G3DSA:3.40.50.1820 17 283 1.3E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS05770 e0a8ad082a175381818cdd62d38fc5d3 587 SUPERFAMILY SSF53335 393 578 7.93E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 PANTHER PTHR33569 2 99 3.9E-39 T 22-04-2016 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 SUPERFAMILY SSF54111 1 99 7.19E-41 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 PANTHER PTHR33569:SF1 2 99 3.9E-39 T 22-04-2016 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 Pfam PF00547 Urease, gamma subunit 1 99 2.4E-42 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 Gene3D G3DSA:3.30.280.10 1 100 6.6E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.942 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15925 a3146419f9bca7692336c5cdbe6c0346 100 PIRSF PIRSF001223 1 100 3.2E-48 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS01960 eed7f792200ad8585fe062de11d9088f 89 SUPERFAMILY SSF64307 10 89 2.62E-24 T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01960 eed7f792200ad8585fe062de11d9088f 89 Pfam PF01206 Sulfurtransferase TusA 21 89 1.9E-19 T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01960 eed7f792200ad8585fe062de11d9088f 89 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01960 eed7f792200ad8585fe062de11d9088f 89 Gene3D G3DSA:3.30.110.40 18 89 2.6E-32 T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01960 eed7f792200ad8585fe062de11d9088f 89 PANTHER PTHR33279 1 89 5.1E-30 T 22-04-2016 YPTB_RS14285 a7a2a993065e46ee459ad42a9bc80ec8 163 Gene3D G3DSA:3.40.50.1240 1 156 1.1E-41 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS14285 a7a2a993065e46ee459ad42a9bc80ec8 163 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 4.0E-49 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPTB_RS14285 a7a2a993065e46ee459ad42a9bc80ec8 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 1.6E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB_RS14285 a7a2a993065e46ee459ad42a9bc80ec8 163 SMART SM00855 2 115 0.0046 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB_RS14285 a7a2a993065e46ee459ad42a9bc80ec8 163 SUPERFAMILY SSF53254 1 141 3.43E-19 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS14285 a7a2a993065e46ee459ad42a9bc80ec8 163 PANTHER PTHR23029 1 87 2.7E-21 T 22-04-2016 YPTB_RS14285 a7a2a993065e46ee459ad42a9bc80ec8 163 PANTHER PTHR23029:SF49 1 87 2.7E-21 T 22-04-2016 YPTB_RS19950 d1e71548dbace9030783e0f6be326d92 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 YPTB_RS19950 d1e71548dbace9030783e0f6be326d92 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.6E-26 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19950 d1e71548dbace9030783e0f6be326d92 101 PANTHER PTHR19836 1 101 4.3E-60 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19950 d1e71548dbace9030783e0f6be326d92 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid YPTB_RS19950 d1e71548dbace9030783e0f6be326d92 101 Gene3D G3DSA:4.10.830.10 41 101 1.8E-31 T 22-04-2016 YPTB_RS19950 d1e71548dbace9030783e0f6be326d92 101 SUPERFAMILY SSF57716 2 101 1.14E-36 T 22-04-2016 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 Gene3D G3DSA:1.10.287.130 228 285 4.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 Gene3D G3DSA:3.30.565.10 286 455 7.0E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 SMART SM00388 236 300 1.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 Pfam PF00672 HAMP domain 164 231 3.5E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 PANTHER PTHR24423:SF531 1 7 1.2E-146 T 22-04-2016 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 PANTHER PTHR24423:SF531 177 455 1.2E-146 T 22-04-2016 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 SUPERFAMILY SSF158472 184 232 2.88E-10 T 22-04-2016 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 PANTHER PTHR24423 1 7 1.2E-146 T 22-04-2016 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 PANTHER PTHR24423 177 455 1.2E-146 T 22-04-2016 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 300 2.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 SMART SM00387 345 457 9.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 SMART SM00304 183 235 6.8E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 SUPERFAMILY SSF55874 289 455 2.36E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 SUPERFAMILY SSF47384 219 300 1.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS15245 260e14ee12a456d44b4be15095099fe3 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 455 1.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS07860 25a4e74835404380a7460ec3fdfb6aed 60 PANTHER PTHR33505 1 58 5.9E-25 T 22-04-2016 YPTB_RS07860 25a4e74835404380a7460ec3fdfb6aed 60 SUPERFAMILY SSF158997 1 54 9.42E-20 T 22-04-2016 YPTB_RS07860 25a4e74835404380a7460ec3fdfb6aed 60 Gene3D G3DSA:2.20.25.10 8 58 5.4E-24 T 22-04-2016 YPTB_RS07860 25a4e74835404380a7460ec3fdfb6aed 60 Pfam PF03966 Trm112p-like protein 2 41 4.0E-9 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 YPTB_RS07860 25a4e74835404380a7460ec3fdfb6aed 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.854 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF00975 Thioesterase domain 2915 3006 2.7E-20 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 1.5E-78 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF47336 1817 1928 7.85E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF00550 Phosphopantetheine attachment site 2832 2894 3.8E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF00550 Phosphopantetheine attachment site 1823 1889 4.0E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF52151 550 677 2.04E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF52151 738 835 2.04E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF53335 2575 2750 4.8E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.30.70.250 675 736 7.9E-4 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2853 2868 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1848 1863 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF00668 Condensation domain 1916 2207 9.2E-41 T 22-04-2016 IPR001242 Condensation domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.50.150 2584 2746 7.2E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.50.150 1909 1940 7.2E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF08415 Nonribosomal peptide synthase 2232 2293 1.4E-16 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF00698 Acyl transferase domain 551 846 1.8E-52 T 22-04-2016 IPR014043 Acyl transferase YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:1.10.1200.10 2828 2899 5.7E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 515 1.4E-13 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SMART SM00825 Beta-ketoacyl synthase 29 452 1.8E-182 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF52777 2098 2343 9.23E-44 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF51735 1365 1540 7.48E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.50.1820 2900 3011 4.0E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.50.1820 3085 3155 4.0E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SMART SM00823 Phosphopantetheine attachment site 2830 2898 0.0025 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SMART SM00823 Phosphopantetheine attachment site 1821 1893 8.8E-4 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 PANTHER PTHR11712 2929 3021 0.0 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 PANTHER PTHR11712 14 1889 0.0 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SMART SM00824 Thioesterase 2918 3152 6.1E-4 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.47.10 290 453 1.6E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 3.0E-74 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.2E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF47336 2828 2894 1.44E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 PANTHER PTHR11712:SF288 2929 3021 0.0 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 PANTHER PTHR11712:SF288 14 1889 0.0 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF08242 Methyltransferase domain 2593 2693 1.6E-16 T 22-04-2016 IPR013217 Methyltransferase type 12 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF08242 Methyltransferase domain 1093 1194 1.1E-20 T 22-04-2016 IPR013217 Methyltransferase type 12 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF51735 1557 1786 2.7E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF55048 675 736 1.44E-6 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF53901 427 447 1.12E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF53901 23 143 1.12E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF53901 172 397 1.12E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.47.10 29 288 1.6E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF53335 1060 1250 1.36E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF52777 1911 2109 1.89E-23 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SUPERFAMILY SSF53474 2898 3152 1.95E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.50.720 1557 1745 6.5E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Pfam PF08659 KR domain 1560 1729 4.5E-37 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.366.10 737 846 9.0E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.366.10 546 671 9.0E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:3.40.50.150 1049 1246 5.1E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1558 1731 5.1E-26 T 22-04-2016 YPTB_RS08780 7da07e2c1972be14cbbec524623e6207 3163 Gene3D G3DSA:1.10.1200.10 1819 1892 3.0E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS01355 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 3.5E-56 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS01355 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 PANTHER PTHR30482:SF9 59 428 3.1E-225 T 22-04-2016 YPTB_RS01355 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 Pfam PF11862 Domain of unknown function (DUF3382) 5 103 5.3E-26 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPTB_RS01355 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 PANTHER PTHR30482 59 428 3.1E-225 T 22-04-2016 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 PANTHER PTHR11748 9 584 1.3E-166 T 22-04-2016 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 SMART SM00060 542 617 3.3E-4 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 SUPERFAMILY SSF51055 634 678 4.71E-8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 SUPERFAMILY SSF49265 536 637 1.23E-16 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 Pfam PF01565 FAD binding domain 33 181 9.0E-12 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 Gene3D G3DSA:2.60.40.10 540 627 3.4E-15 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 Gene3D G3DSA:3.30.43.10 22 94 9.9E-7 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 Gene3D G3DSA:2.10.10.20 634 671 1.1E-6 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 PANTHER PTHR11748:SF33 9 584 1.3E-166 T 22-04-2016 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 SUPERFAMILY SSF56176 5 221 7.48E-23 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS02120 f45b13a38687050977bfbb2a8743cc21 685 Pfam PF08031 Berberine and berberine like 480 536 4.5E-11 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 YPTB_RS21355 77ef118fbdcdfa8002e7697274ed57ba 245 PANTHER PTHR30085 14 245 6.6E-67 T 22-04-2016 YPTB_RS21355 77ef118fbdcdfa8002e7697274ed57ba 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 229 6.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21355 77ef118fbdcdfa8002e7697274ed57ba 245 SUPERFAMILY SSF161098 17 226 1.96E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21355 77ef118fbdcdfa8002e7697274ed57ba 245 Gene3D G3DSA:1.10.3720.10 17 239 1.4E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21355 77ef118fbdcdfa8002e7697274ed57ba 245 PANTHER PTHR30085:SF1 14 245 6.6E-67 T 22-04-2016 YPTB_RS21355 77ef118fbdcdfa8002e7697274ed57ba 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 85 2.6E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS07420 d5701d2a8fd4da584bfa8ece55e68096 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07420 d5701d2a8fd4da584bfa8ece55e68096 262 SMART SM00382 30 215 8.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07420 d5701d2a8fd4da584bfa8ece55e68096 262 SUPERFAMILY SSF52540 5 229 9.82E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07420 d5701d2a8fd4da584bfa8ece55e68096 262 Pfam PF00005 ABC transporter 28 165 3.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07420 d5701d2a8fd4da584bfa8ece55e68096 262 PANTHER PTHR24220 6 243 3.7E-64 T 22-04-2016 YPTB_RS07420 d5701d2a8fd4da584bfa8ece55e68096 262 Gene3D G3DSA:3.40.50.300 7 243 2.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 PANTHER PTHR30027:SF3 1 243 1.4E-102 T 22-04-2016 YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 SUPERFAMILY SSF88697 2 70 1.71E-17 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 6.7E-87 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 SUPERFAMILY SSF75217 75 242 1.62E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 PANTHER PTHR30027 1 243 1.4E-102 T 22-04-2016 YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 Gene3D G3DSA:3.40.1280.10 75 242 3.1E-57 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 Pfam PF04452 RNA methyltransferase 19 236 5.8E-73 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 PIRSF PIRSF015601 2 242 9.8E-54 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS17370 69487175222925c1e6fd2538458f23a8 243 Gene3D G3DSA:2.40.240.20 1 70 7.2E-27 T 22-04-2016 YPTB_RS17455 fe7b17d6f645dd4f430476fb3c5ca6ae 239 Gene3D G3DSA:3.40.50.150 56 193 2.6E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS17455 fe7b17d6f645dd4f430476fb3c5ca6ae 239 PANTHER PTHR23417:SF14 5 239 1.1E-90 T 22-04-2016 YPTB_RS17455 fe7b17d6f645dd4f430476fb3c5ca6ae 239 Pfam PF02390 Putative methyltransferase 64 233 1.8E-60 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YPTB_RS17455 fe7b17d6f645dd4f430476fb3c5ca6ae 239 SUPERFAMILY SSF53335 18 237 3.41E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS17455 fe7b17d6f645dd4f430476fb3c5ca6ae 239 PANTHER PTHR23417 5 239 1.1E-90 T 22-04-2016 YPTB_RS17455 fe7b17d6f645dd4f430476fb3c5ca6ae 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 2.1E-71 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YPTB_RS17455 fe7b17d6f645dd4f430476fb3c5ca6ae 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.119 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Pfam PF00226 DnaJ domain 214 273 2.0E-9 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Gene3D G3DSA:1.10.287.110 215 273 1.4E-12 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 SMART SM00271 210 275 3.4E-15 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Pfam PF05099 Tellurite resistance protein TerB 44 171 7.1E-12 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 SUPERFAMILY SSF46565 132 273 8.27E-28 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Gene3D G3DSA:1.10.3680.10 21 214 6.0E-30 T 22-04-2016 IPR029024 TerB-like YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 PRINTS PR00625 DnaJ domain signature 255 275 2.8E-6 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 PRINTS PR00625 DnaJ domain signature 213 231 2.8E-6 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 PRINTS PR00625 DnaJ domain signature 231 246 2.8E-6 T 22-04-2016 IPR001623 DnaJ domain YPTB_RS03575 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 277 43.289 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 YPTB_RS12485 43004045a45df006aa70e426bd3b8adc 199 PANTHER PTHR30055:SF20 1 197 6.5E-95 T 22-04-2016 YPTB_RS12485 43004045a45df006aa70e426bd3b8adc 199 PANTHER PTHR30055 1 197 6.5E-95 T 22-04-2016 YPTB_RS12485 43004045a45df006aa70e426bd3b8adc 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 3.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS12485 43004045a45df006aa70e426bd3b8adc 199 SUPERFAMILY SSF48498 85 196 3.86E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPTB_RS12485 43004045a45df006aa70e426bd3b8adc 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 88 186 6.2E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPTB_RS12485 43004045a45df006aa70e426bd3b8adc 199 SUPERFAMILY SSF46689 2 77 6.67E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS12485 43004045a45df006aa70e426bd3b8adc 199 Gene3D G3DSA:1.10.357.10 10 185 7.5E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 Gene3D G3DSA:3.40.50.2000 13 479 6.0E-207 T 22-04-2016 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 SUPERFAMILY SSF53756 12 814 0.0 T 22-04-2016 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 Gene3D G3DSA:3.40.50.2000 480 795 1.6E-140 T 22-04-2016 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 PANTHER PTHR11468 13 815 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 PIRSF PIRSF000460 2 815 6.5E-232 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 PANTHER PTHR11468:SF3 13 815 0.0 T 22-04-2016 YPTB_RS20460 d9561f5db88b44ce9b19a32f7b59d8c0 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPTB_RS20865 33bf07fddda3d1655d8bf2effb519859 252 PANTHER PTHR24220 3 240 9.4E-151 T 22-04-2016 YPTB_RS20865 33bf07fddda3d1655d8bf2effb519859 252 Pfam PF00005 ABC transporter 17 164 3.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS20865 33bf07fddda3d1655d8bf2effb519859 252 PANTHER PTHR24220:SF471 3 240 9.4E-151 T 22-04-2016 YPTB_RS20865 33bf07fddda3d1655d8bf2effb519859 252 SUPERFAMILY SSF52540 1 225 6.85E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20865 33bf07fddda3d1655d8bf2effb519859 252 Gene3D G3DSA:3.40.50.300 1 226 1.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20865 33bf07fddda3d1655d8bf2effb519859 252 SMART SM00382 26 213 3.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 SMART SM00518 3 279 1.2E-128 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.751 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 PANTHER PTHR21445 1 282 1.3E-154 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 SUPERFAMILY SSF51658 1 279 1.96E-99 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 1.0E-106 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 Gene3D G3DSA:3.20.20.150 1 278 1.8E-116 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 PANTHER PTHR21445:SF0 1 282 1.3E-154 T 22-04-2016 YPTB_RS07390 9b1f1685f014888860602924d4ff9ca1 285 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 1.4E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Gene3D G3DSA:1.10.8.60 381 464 1.0E-29 T 22-04-2016 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 SUPERFAMILY SSF52540 560 852 2.32E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Gene3D G3DSA:3.40.50.300 565 793 4.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Gene3D G3DSA:1.10.8.60 794 865 7.6E-11 T 22-04-2016 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 3.4E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Gene3D G3DSA:1.10.1780.10 12 130 1.3E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 SUPERFAMILY SSF52540 196 531 4.53E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 SUPERFAMILY SSF81923 12 127 3.73E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 1.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 SMART SM01086 782 875 4.8E-11 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PANTHER PTHR11638 1 127 0.0 T 22-04-2016 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PANTHER PTHR11638 162 869 0.0 T 22-04-2016 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PANTHER PTHR11638:SF11 1 127 0.0 T 22-04-2016 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 PANTHER PTHR11638:SF11 162 869 0.0 T 22-04-2016 YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 SMART SM00382 611 772 3.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 SMART SM00382 234 379 7.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Gene3D G3DSA:3.40.50.300 196 378 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08205 a5d6ab6edaf5827ba7cb94b18a4634fe 882 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 860 1.5E-12 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF52540 136 381 1.66E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 PANTHER PTHR32071:SF5 1 445 4.4E-258 T 22-04-2016 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:3.40.50.2300 4 123 3.3E-36 T 22-04-2016 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 Pfam PF00158 Sigma-54 interaction domain 137 303 5.1E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:1.10.10.60 392 438 2.5E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:1.10.8.60 310 386 1.5E-22 T 22-04-2016 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF46689 388 438 1.85E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 Pfam PF00072 Response regulator receiver domain 10 118 1.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 SMART SM00448 7 118 2.8E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF52172 6 181 5.27E-43 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 SMART SM00382 157 300 3.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 PANTHER PTHR32071 1 445 4.4E-258 T 22-04-2016 YPTB_RS15540 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:3.40.50.300 135 308 3.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 PANTHER PTHR31760:SF0 1 206 2.0E-85 T 22-04-2016 YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 5.4E-62 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 SUPERFAMILY SSF53335 5 204 9.58E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Gene3D G3DSA:3.40.50.150 4 204 6.4E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 2.9E-58 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 PANTHER PTHR31760 1 206 2.0E-85 T 22-04-2016 YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 PIRSF PIRSF003078 1 206 5.0E-61 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPTB_RS21450 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.589 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 PANTHER PTHR32093:SF41 1 552 7.0E-131 T 22-04-2016 YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 PANTHER PTHR32093:SF41 3110 3115 7.0E-131 T 22-04-2016 YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 Gene3D G3DSA:2.160.20.10 76 367 1.9E-100 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.5E-6 T 22-04-2016 IPR024973 ESPR domain YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 Pfam PF05860 haemagglutination activity domain 75 207 1.4E-33 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 582 611 0.65 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1227 1258 0.0037 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1366 1395 0.1 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 388 8.0E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 994 1031 0.13 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 317 353 0.12 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1555 1582 0.32 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1651 1681 0.081 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 929 969 1.1E-8 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2004 2041 0.053 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1445 1477 2.1 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1351 1376 2.7 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 668 699 0.013 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1031 1066 2.6 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 973 1011 0.0056 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1458 1496 2.5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 PANTHER PTHR32093 1 552 7.0E-131 T 22-04-2016 YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 PANTHER PTHR32093 3110 3115 7.0E-131 T 22-04-2016 YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 Pfam PF13332 Haemagluttinin repeat 2372 2475 7.1E-6 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 Pfam PF13332 Haemagluttinin repeat 2023 2203 1.8E-5 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 Pfam PF13332 Haemagluttinin repeat 2519 2689 1.2E-40 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 SUPERFAMILY SSF51126 77 357 2.07E-69 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 Pfam PF04829 Pre-toxin domain with VENN motif 3043 3092 1.3E-20 T 22-04-2016 IPR006914 VENN motif-containing domain YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 SMART SM00912 88 208 8.4E-48 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS18730 93e1ad40d1b624d10fee7e470d070137 3378 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 5.2E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 253 1.5E-74 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 PANTHER PTHR30481:SF3 2 271 5.7E-130 T 22-04-2016 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 SUPERFAMILY SSF53335 5 269 3.06E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:1.10.1020.10 60 156 2.8E-34 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:3.40.50.150 1 59 2.9E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:3.40.50.150 160 268 2.9E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 PANTHER PTHR30481 2 271 5.7E-130 T 22-04-2016 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 269 2.4E-93 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPTB_RS20260 a385d9919fb510604bdd45c6141cf83a 271 PIRSF PIRSF000398 1 271 2.9E-63 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 YPTB_RS11370 ea6074aa0fe35b5d4b2cfb30a8467df7 289 PIRSF PIRSF006232 2 288 2.4E-90 T 22-04-2016 IPR012093 Pirin YPTB_RS11370 ea6074aa0fe35b5d4b2cfb30a8467df7 289 Pfam PF05726 Pirin C-terminal cupin domain 182 284 3.7E-27 T 22-04-2016 IPR008778 Pirin, C-terminal domain YPTB_RS11370 ea6074aa0fe35b5d4b2cfb30a8467df7 289 Pfam PF02678 Pirin 20 127 2.8E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain YPTB_RS11370 ea6074aa0fe35b5d4b2cfb30a8467df7 289 Gene3D G3DSA:2.60.120.10 4 257 1.7E-81 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS11370 ea6074aa0fe35b5d4b2cfb30a8467df7 289 PANTHER PTHR13903 1 288 3.1E-191 T 22-04-2016 IPR012093 Pirin YPTB_RS11370 ea6074aa0fe35b5d4b2cfb30a8467df7 289 SUPERFAMILY SSF51182 4 286 8.92E-85 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS11370 ea6074aa0fe35b5d4b2cfb30a8467df7 289 PANTHER PTHR13903:SF12 1 288 3.1E-191 T 22-04-2016 YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 PANTHER PTHR30522:SF0 6 280 1.7E-136 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 Gene3D G3DSA:1.10.287.1080 149 236 2.0E-11 T 22-04-2016 YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 Gene3D G3DSA:1.10.287.1080 20 83 1.6E-7 T 22-04-2016 YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 PANTHER PTHR30522 6 280 1.7E-136 T 22-04-2016 YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 185 246 9.4E-7 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 38 111 2.8E-28 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 TIGRFAM TIGR00444 mazG: MazG family protein 21 274 1.7E-106 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 SUPERFAMILY SSF101386 14 114 5.23E-25 T 22-04-2016 YPTB_RS04190 28166a4f05e5857a7d15380c3dd8b4ac 280 SUPERFAMILY SSF101386 153 253 7.29E-23 T 22-04-2016 YPTB_RS21120 8d3fea2bd114dec3dcdc2e5ac5a88fea 214 PANTHER PTHR30363:SF9 7 212 2.0E-114 T 22-04-2016 YPTB_RS21120 8d3fea2bd114dec3dcdc2e5ac5a88fea 214 SUPERFAMILY SSF46785 16 194 3.49E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21120 8d3fea2bd114dec3dcdc2e5ac5a88fea 214 PANTHER PTHR30363 7 212 2.0E-114 T 22-04-2016 YPTB_RS21120 8d3fea2bd114dec3dcdc2e5ac5a88fea 214 Gene3D G3DSA:1.10.10.10 16 111 2.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 1.0E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF11638 DnaA N-terminal domain 4 64 1.4E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050 125 462 9.5E-252 T 22-04-2016 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050 1 98 9.5E-252 T 22-04-2016 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 SUPERFAMILY SSF52540 127 338 7.92E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF00308 Bacterial dnaA protein 128 344 5.6E-99 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 SMART SM00760 370 439 6.1E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:3.40.50.300 116 291 5.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050:SF2 125 462 9.5E-252 T 22-04-2016 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050:SF2 1 98 9.5E-252 T 22-04-2016 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:1.10.1750.10 361 461 7.2E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 1.9E-186 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:1.10.8.60 293 360 5.5E-30 T 22-04-2016 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 SUPERFAMILY SSF48295 358 461 3.4E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.412 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YPTB_RS21300 f05b9d36a29d5b13df96e544916a916b 462 SMART SM00382 159 361 6.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 3.3E-131 T 22-04-2016 IPR030827 Inositol 2-dehydrogenase YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 PANTHER PTHR22604 4 328 2.4E-101 T 22-04-2016 YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 Gene3D G3DSA:3.40.50.720 1 133 5.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 8.0E-20 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 Gene3D G3DSA:3.30.360.10 134 328 6.0E-54 T 22-04-2016 YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 SUPERFAMILY SSF51735 2 143 3.61E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 162 234 9.5E-7 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 PANTHER PTHR22604:SF92 4 328 2.4E-101 T 22-04-2016 YPTB_RS05915 692796cc528c5e6a90c874c23a8e9e55 328 SUPERFAMILY SSF55347 124 287 1.24E-33 T 22-04-2016 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 Gene3D G3DSA:1.20.120.140 261 352 1.4E-35 T 22-04-2016 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 SMART SM00382 369 549 6.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 299 571 65.191 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 Gene3D G3DSA:3.40.50.300 368 570 4.0E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 299 570 5.3E-115 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 SUPERFAMILY SSF47364 271 350 3.79E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 Pfam PF00448 SRP54-type protein, GTPase domain 371 570 1.4E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 PANTHER PTHR11564 266 574 1.5E-155 T 22-04-2016 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 SMART SM00963 276 356 5.1E-25 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 Pfam PF02881 SRP54-type protein, helical bundle domain 287 352 6.6E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 SUPERFAMILY SSF52540 368 570 7.34E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 PANTHER PTHR11564:SF16 266 574 1.5E-155 T 22-04-2016 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 544 557 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS01320 15242bdc9a2fb52eb0856070aa40118a 574 SMART SM00962 370 571 1.3E-122 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Gene3D G3DSA:3.40.50.1000 621 662 5.3E-54 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Gene3D G3DSA:3.40.50.1000 773 914 5.3E-54 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 360 954 4.0E-185 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Gene3D G3DSA:3.30.70.100 3 64 1.4E-13 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Gene3D G3DSA:3.30.70.100 228 293 1.5E-22 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Pfam PF00403 Heavy-metal-associated domain 234 286 6.7E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Pfam PF00403 Heavy-metal-associated domain 74 128 1.3E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Pfam PF00403 Heavy-metal-associated domain 8 62 2.3E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Gene3D G3DSA:3.40.1110.10 663 772 3.3E-17 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF81653 449 546 6.93E-25 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 ProSitePatterns PS01047 Heavy-metal-associated domain. 232 261 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 ProSitePatterns PS01047 Heavy-metal-associated domain. 75 104 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF55008 226 294 5.76E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Pfam PF00122 E1-E2 ATPase 417 638 8.4E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PANTHER PTHR24093 215 956 0.0 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Gene3D G3DSA:3.30.70.100 71 130 1.3E-16 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Pfam PF00702 haloacid dehalogenase-like hydrolase 645 859 1.4E-46 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 ProSitePatterns PS01229 Hypothetical cof family signature 2. 845 867 - T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF81665 413 450 1.7E-10 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF81665 894 911 1.7E-10 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF81665 547 642 1.7E-10 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF55008 70 133 3.01E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PANTHER PTHR24093:SF319 215 956 0.0 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF56784 703 951 5.5E-61 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF56784 646 666 5.5E-61 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 Gene3D G3DSA:2.70.150.10 378 546 2.7E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 SUPERFAMILY SSF55008 2 67 8.77E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 662 7.2E-25 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 845 864 7.2E-25 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 792 802 7.2E-25 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 868 880 7.2E-25 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 510 7.2E-25 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 770 781 7.2E-25 T 22-04-2016 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 379 954 2.5E-179 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 418 922 6.0E-85 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 845 861 6.6E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 876 901 6.6E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS05640 38d9b49f71dc2e4a12ea3b7f631d4e3c 961 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 650 656 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 PANTHER PTHR30537:SF8 1 305 1.8E-147 T 22-04-2016 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 SUPERFAMILY SSF46785 3 85 1.11E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 SUPERFAMILY SSF53850 93 292 5.07E-24 T 22-04-2016 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 Gene3D G3DSA:1.10.10.10 2 86 9.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 PANTHER PTHR30537 1 305 1.8E-147 T 22-04-2016 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 Gene3D G3DSA:3.40.190.10 172 257 1.1E-13 T 22-04-2016 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 Gene3D G3DSA:3.40.190.10 94 171 5.6E-13 T 22-04-2016 YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 Pfam PF03466 LysR substrate binding domain 93 288 1.5E-20 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS13585 9ad9afb9f4a22ab8c271ef5f29df6775 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 8.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS01510 94a9b80de90d1d8253bc9b7dd808fffd 220 PANTHER PTHR33162 2 195 2.6E-98 T 22-04-2016 YPTB_RS01510 94a9b80de90d1d8253bc9b7dd808fffd 220 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 19.365 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YPTB_RS01510 94a9b80de90d1d8253bc9b7dd808fffd 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YPTB_RS01510 94a9b80de90d1d8253bc9b7dd808fffd 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YPTB_RS01510 94a9b80de90d1d8253bc9b7dd808fffd 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YPTB_RS01510 94a9b80de90d1d8253bc9b7dd808fffd 220 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.6E-32 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YPTB_RS01510 94a9b80de90d1d8253bc9b7dd808fffd 220 PANTHER PTHR33162:SF4 2 195 2.6E-98 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Gene3D G3DSA:3.40.1110.10 486 609 3.1E-21 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 474 480 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 SUPERFAMILY SSF55008 82 146 1.7E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 SUPERFAMILY SSF56784 470 490 1.37E-51 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 SUPERFAMILY SSF56784 541 780 1.37E-51 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Pfam PF00403 Heavy-metal-associated domain 87 143 7.9E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 782 1.2E-171 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 472 486 2.8E-28 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 321 335 2.8E-28 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 703 715 2.8E-28 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 2.8E-28 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 618 2.8E-28 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 699 2.8E-28 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 SUPERFAMILY SSF81653 274 371 3.66E-21 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Pfam PF00122 E1-E2 ATPase 242 463 2.6E-58 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00941 Cadmium-transporting ATPase signature 276 292 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00941 Cadmium-transporting ATPase signature 337 353 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00941 Cadmium-transporting ATPase signature 86 95 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00941 Cadmium-transporting ATPase signature 97 118 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PRINTS PR00941 Cadmium-transporting ATPase signature 256 276 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Gene3D G3DSA:3.30.70.100 82 145 1.0E-15 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Gene3D G3DSA:3.40.50.1000 610 748 1.4E-42 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Gene3D G3DSA:3.40.50.1000 448 485 1.4E-42 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PANTHER PTHR24093 40 757 2.7E-262 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 PANTHER PTHR24093:SF126 40 757 2.7E-262 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 SUPERFAMILY SSF81665 729 768 4.45E-17 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 SUPERFAMILY SSF81665 372 466 4.45E-17 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 SUPERFAMILY SSF81665 224 275 4.45E-17 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Gene3D G3DSA:2.70.150.10 224 372 3.1E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 Pfam PF00702 haloacid dehalogenase-like hydrolase 470 692 2.8E-34 T 22-04-2016 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 ProSitePatterns PS01047 Heavy-metal-associated domain. 88 117 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 584 758 7.0E-38 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS01285 0c31cc7c3930955c784d9bf9db7e05ba 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 494 2.6E-35 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 SUPERFAMILY SSF52540 24 225 1.12E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 PANTHER PTHR24220 3 384 3.5E-200 T 22-04-2016 YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 PANTHER PTHR24220:SF557 3 384 3.5E-200 T 22-04-2016 YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 SMART SM00382 28 238 5.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 SMART SM00382 285 479 3.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 Pfam PF00005 ABC transporter 276 429 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 Pfam PF00005 ABC transporter 24 163 4.2E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 Gene3D G3DSA:3.40.50.300 255 468 6.8E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 Gene3D G3DSA:3.40.50.300 23 226 1.9E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06510 216e92acad052945c4a8d0d6cfe4d069 496 SUPERFAMILY SSF52540 250 481 2.42E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11325 c01272f8f7e6b9e8614ffd9f69ff27fb 399 Pfam PF00266 Aminotransferase class-V 8 371 1.1E-83 T 22-04-2016 IPR000192 Aminotransferase class V domain YPTB_RS11325 c01272f8f7e6b9e8614ffd9f69ff27fb 399 PANTHER PTHR11601 1 388 9.3E-202 T 22-04-2016 YPTB_RS11325 c01272f8f7e6b9e8614ffd9f69ff27fb 399 Gene3D G3DSA:3.40.640.10 20 254 5.4E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS11325 c01272f8f7e6b9e8614ffd9f69ff27fb 399 SUPERFAMILY SSF53383 3 380 2.39E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS11325 c01272f8f7e6b9e8614ffd9f69ff27fb 399 Gene3D G3DSA:3.90.1150.10 255 376 2.9E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS11325 c01272f8f7e6b9e8614ffd9f69ff27fb 399 PANTHER PTHR11601:SF45 1 388 9.3E-202 T 22-04-2016 YPTB_RS11325 c01272f8f7e6b9e8614ffd9f69ff27fb 399 PIRSF PIRSF005572 5 386 7.8E-126 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 Gene3D G3DSA:1.10.10.10 12 81 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 Pfam PF00480 ROK family 96 389 1.5E-49 T 22-04-2016 IPR000600 ROK family YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 Gene3D G3DSA:3.30.420.40 223 373 4.7E-40 T 22-04-2016 YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 SUPERFAMILY SSF53067 88 394 4.45E-43 T 22-04-2016 YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 PANTHER PTHR18964 63 402 6.0E-257 T 22-04-2016 YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 PANTHER PTHR18964:SF127 63 402 6.0E-257 T 22-04-2016 YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 SUPERFAMILY SSF46785 12 77 1.26E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11955 d03c48307182a4cc13180ac36eda4379 405 Gene3D G3DSA:3.30.420.40 83 222 3.1E-31 T 22-04-2016 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 350 3.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 SMART SM00387 242 351 4.3E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 SUPERFAMILY SSF55874 186 349 1.07E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 PANTHER PTHR24423:SF538 77 348 1.2E-186 T 22-04-2016 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 5.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 SMART SM00388 136 196 4.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 Gene3D G3DSA:1.10.287.130 129 192 7.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 PANTHER PTHR24423 77 348 1.2E-186 T 22-04-2016 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 SUPERFAMILY SSF47384 121 194 7.85E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 Pfam PF00672 HAMP domain 65 130 3.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS02680 fa064e50fb658ff2a4e03aae8ca3b6eb 355 Gene3D G3DSA:3.30.565.10 209 351 3.0E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 PIRSF PIRSF500136 1 420 2.2E-147 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 PANTHER PTHR11374:SF4 1 420 7.2E-200 T 22-04-2016 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 Gene3D G3DSA:3.40.50.720 6 202 9.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 6.5E-26 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 SUPERFAMILY SSF52413 311 419 6.02E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 Gene3D G3DSA:3.40.50.720 237 419 1.0E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 187 5.6E-58 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 3.0E-118 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 2.1E-19 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 PIRSF PIRSF000124 4 418 1.7E-73 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 Gene3D G3DSA:1.20.5.100 206 234 9.7E-6 T 22-04-2016 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 76.271 T 22-04-2016 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335|UniPathway: UPA00566 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 PANTHER PTHR11374 1 420 7.2E-200 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 SUPERFAMILY SSF51735 5 198 1.92E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 SMART SM00984 324 420 2.9E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS01035 d424e6bc4f778f72fad77ea1e38cca06 420 SUPERFAMILY SSF48179 206 298 1.62E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS14230 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 Pfam PF00419 Fimbrial protein 32 175 6.0E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS14230 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 SUPERFAMILY SSF49401 30 176 2.44E-36 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS14230 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 PANTHER PTHR33420 5 176 8.4E-88 T 22-04-2016 YPTB_RS14230 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 Gene3D G3DSA:2.60.40.1090 29 176 1.0E-42 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS14230 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 PANTHER PTHR33420:SF7 5 176 8.4E-88 T 22-04-2016 YPTB_RS13730 6a887b09f683c844656f3ee2ad172dbe 562 PANTHER PTHR34597 2 562 4.2E-291 T 22-04-2016 YPTB_RS13730 6a887b09f683c844656f3ee2ad172dbe 562 Gene3D G3DSA:3.10.20.310 73 153 5.8E-22 T 22-04-2016 YPTB_RS13730 6a887b09f683c844656f3ee2ad172dbe 562 PIRSF PIRSF029745 3 562 2.9E-163 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPTB_RS13730 6a887b09f683c844656f3ee2ad172dbe 562 Pfam PF08479 POTRA domain, ShlB-type 77 153 2.9E-25 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB_RS13730 6a887b09f683c844656f3ee2ad172dbe 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 165 506 1.6E-25 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPTB_RS13730 6a887b09f683c844656f3ee2ad172dbe 562 PANTHER PTHR34597:SF2 2 562 4.2E-291 T 22-04-2016 YPTB_RS13730 6a887b09f683c844656f3ee2ad172dbe 562 Gene3D G3DSA:2.40.160.50 184 562 2.5E-125 T 22-04-2016 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 Gene3D G3DSA:1.20.1650.10 28 101 7.0E-24 T 22-04-2016 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 SUPERFAMILY SSF53383 50 505 2.53E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 99 438 1.0E-61 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 Gene3D G3DSA:3.90.1150.10 390 506 5.7E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 PANTHER PTHR11999:SF106 36 505 1.1E-267 T 22-04-2016 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 377 392 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 102 121 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 142 161 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 420 439 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 PANTHER PTHR11999 36 505 1.1E-267 T 22-04-2016 YPTB_RS08475 8df7b9009140da674f87a3760ad91e58 515 Gene3D G3DSA:3.40.640.10 112 389 6.9E-94 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 Gene3D G3DSA:2.40.30.60 8 100 6.6E-36 T 22-04-2016 IPR002676 RimM protein GO:0006364 YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 SUPERFAMILY SSF50346 106 182 2.35E-19 T 22-04-2016 IPR011033 PRC-barrel-like YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.537 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 Pfam PF05239 PRC-barrel domain 103 177 3.8E-9 T 22-04-2016 IPR027275 PRC-barrel domain YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 2.6E-60 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 SUPERFAMILY SSF50447 13 99 3.46E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 PANTHER PTHR33692 9 180 9.5E-67 T 22-04-2016 YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 Pfam PF01782 RimM N-terminal domain 16 96 1.4E-26 T 22-04-2016 IPR002676 RimM protein GO:0006364 YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 PANTHER PTHR33692:SF1 9 180 9.5E-67 T 22-04-2016 YPTB_RS04635 953c5d99f89d3131dc40c06bd0d438f6 182 Gene3D G3DSA:2.30.30.240 106 182 1.5E-29 T 22-04-2016 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 187 1.5E-85 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.54 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 Gene3D G3DSA:3.30.70.20 111 178 2.5E-16 T 22-04-2016 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 Pfam PF04060 Putative Fe-S cluster 44 76 2.2E-14 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 3.9E-17 T 22-04-2016 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 PIRSF PIRSF005784 3 190 6.1E-86 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 PANTHER PTHR11938:SF64 1 204 5.2E-98 T 22-04-2016 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 PANTHER PTHR11938 1 204 5.2E-98 T 22-04-2016 YPTB_RS11830 72f8dcab78943cd7d2ebfdd9b9586819 207 SUPERFAMILY SSF54862 38 176 1.78E-29 T 22-04-2016 YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 PANTHER PTHR10794:SF46 1 324 1.7E-95 T 22-04-2016 YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 PIRSF PIRSF005211 1 326 2.8E-104 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 Gene3D G3DSA:3.40.50.1820 41 171 5.8E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 Gene3D G3DSA:3.40.50.1820 247 323 5.8E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 SUPERFAMILY SSF53474 28 302 1.88E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 Pfam PF00561 alpha/beta hydrolase fold 60 298 1.4E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 PANTHER PTHR10794 1 324 1.7E-95 T 22-04-2016 YPTB_RS20145 9140e549e62624487f2355e5307ffc62 326 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 Gene3D G3DSA:3.30.470.20 94 219 2.8E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 Gene3D G3DSA:3.30.200.20 7 93 1.2E-32 T 22-04-2016 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.6 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 6.6E-79 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 Pfam PF01259 SAICAR synthetase 6 231 5.1E-57 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 SUPERFAMILY SSF56104 2 232 4.58E-75 T 22-04-2016 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 PANTHER PTHR11609:SF2 3 236 1.5E-120 T 22-04-2016 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPTB_RS15065 9294d831c1f13b93454f6745bfa532b8 237 PANTHER PTHR11609 3 236 1.5E-120 T 22-04-2016 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 Gene3D G3DSA:3.20.20.100 1 259 1.6E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PIRSF PIRSF000097 1 266 3.2E-63 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 Pfam PF00248 Aldo/keto reductase family 8 250 1.8E-45 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 2.1E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 2.1E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 2.1E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 2.1E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 2.1E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PANTHER PTHR11732 1 267 1.7E-177 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 SUPERFAMILY SSF51430 2 259 3.93E-76 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPTB_RS16065 8484ba1914deb08cdd2bacf6145314b4 267 PANTHER PTHR11732:SF100 1 267 1.7E-177 T 22-04-2016 YPTB_RS19505 85ec8645a545e268b2a3a292159033e0 233 SMART SM01133 9 225 8.6E-52 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS19505 85ec8645a545e268b2a3a292159033e0 233 PIRSF PIRSF001357 3 229 3.6E-62 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS19505 85ec8645a545e268b2a3a292159033e0 233 Pfam PF01791 DeoC/LacD family aldolase 54 205 4.6E-7 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS19505 85ec8645a545e268b2a3a292159033e0 233 SUPERFAMILY SSF51569 6 226 2.62E-52 T 22-04-2016 YPTB_RS19505 85ec8645a545e268b2a3a292159033e0 233 Gene3D G3DSA:3.20.20.70 7 226 2.3E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS19505 85ec8645a545e268b2a3a292159033e0 233 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 10 221 7.5E-46 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS19505 85ec8645a545e268b2a3a292159033e0 233 PANTHER PTHR10889 1 230 4.0E-83 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 PANTHER PTHR32338 1 334 4.7E-166 T 22-04-2016 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 3.3E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.4E-127 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.7E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.796 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 Gene3D G3DSA:3.40.50.720 1 162 1.6E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 Gene3D G3DSA:3.30.360.10 163 308 1.5E-48 T 22-04-2016 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 SUPERFAMILY SSF51735 2 182 2.82E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 SMART SM00859 3 146 1.6E-53 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPTB_RS00665 890d821dbc300796fe9cb5e6d9bf184b 334 SUPERFAMILY SSF55347 154 308 3.18E-49 T 22-04-2016 YPTB_RS15365 31ef0368f548049ae14cf45d4347fee5 211 Gene3D G3DSA:1.25.40.10 112 197 5.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15365 31ef0368f548049ae14cf45d4347fee5 211 Pfam PF09976 Tetratricopeptide repeat-like domain 15 210 1.5E-56 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain YPTB_RS15365 31ef0368f548049ae14cf45d4347fee5 211 Gene3D G3DSA:1.25.40.10 54 111 6.1E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15365 31ef0368f548049ae14cf45d4347fee5 211 SUPERFAMILY SSF48452 97 196 1.07E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15365 31ef0368f548049ae14cf45d4347fee5 211 PANTHER PTHR38035 2 211 1.4E-94 T 22-04-2016 YPTB_RS15365 31ef0368f548049ae14cf45d4347fee5 211 PIRSF PIRSF006170 1 211 4.1E-56 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 Pfam PF00267 Gram-negative porin 27 360 5.6E-130 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 314 331 6.5E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 50 61 6.5E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 6.5E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 6.5E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 6.5E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 Gene3D G3DSA:2.40.160.10 22 360 3.1E-94 T 22-04-2016 IPR023614 Porin domain YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 SUPERFAMILY SSF56935 22 360 1.6E-71 T 22-04-2016 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PANTHER PTHR34501 2 360 9.8E-182 T 22-04-2016 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PANTHER PTHR34501:SF4 2 360 9.8E-182 T 22-04-2016 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 270 289 1.5E-52 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 1.5E-52 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 1.5E-52 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 1.5E-52 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS10775 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.5E-52 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 PANTHER PTHR11609:SF5 1 324 8.3E-109 T 22-04-2016 YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 Pfam PF02222 ATP-grasp domain 88 254 3.0E-53 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.796 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 PANTHER PTHR11609 1 324 8.3E-109 T 22-04-2016 YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 324 3.0E-108 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 Gene3D G3DSA:3.40.50.20 1 69 1.7E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF52440 2 74 3.17E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF51246 278 353 2.2E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF56059 79 274 1.02E-56 T 22-04-2016 YPTB_RS05685 6d90c7ae595f19cff93b35e1309d4aa3 354 Gene3D G3DSA:3.30.470.20 119 353 2.2E-79 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.8E-70 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.6E-28 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 SUPERFAMILY SSF54211 79 159 5.06E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 4.3E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 SUPERFAMILY SSF54768 9 75 4.08E-23 T 22-04-2016 YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 Gene3D G3DSA:3.30.230.10 76 159 6.3E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.65 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 Gene3D G3DSA:3.30.160.20 10 72 6.8E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPTB_RS19930 4dcad5d817dc46b1d4f40d1f04561136 167 PANTHER PTHR13718 10 164 5.2E-80 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 Gene3D G3DSA:3.40.190.10 207 245 7.2E-46 T 22-04-2016 YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 Gene3D G3DSA:3.40.190.10 24 102 7.2E-46 T 22-04-2016 YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 4.1E-69 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 SMART SM00062 26 245 2.1E-73 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 Gene3D G3DSA:3.40.190.10 103 206 1.1E-32 T 22-04-2016 YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 SMART SM00079 26 244 5.8E-8 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 PANTHER PTHR18966 25 243 3.2E-64 T 22-04-2016 YPTB_RS13835 c3b6e9c6632b9b9d0385c930744a3f21 247 SUPERFAMILY SSF53850 8 244 5.98E-75 T 22-04-2016 YPTB_RS12580 cac3aea8b2bd48e22554d4669b300f51 78 PIRSF PIRSF002855 1 78 8.0E-29 T 22-04-2016 IPR016367 Murein-lipoprotein YPTB_RS12580 cac3aea8b2bd48e22554d4669b300f51 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 9.6E-25 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 YPTB_RS12580 cac3aea8b2bd48e22554d4669b300f51 78 Gene3D G3DSA:1.20.5.190 22 73 2.0E-23 T 22-04-2016 YPTB_RS12580 cac3aea8b2bd48e22554d4669b300f51 78 PANTHER PTHR38763 1 78 1.0E-28 T 22-04-2016 YPTB_RS12580 cac3aea8b2bd48e22554d4669b300f51 78 SUPERFAMILY SSF58042 24 73 2.09E-22 T 22-04-2016 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 PANTHER PTHR11680:SF9 1 416 0.0 T 22-04-2016 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 Gene3D G3DSA:3.40.640.10 37 285 7.7E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 PANTHER PTHR11680 1 416 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.153 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 SUPERFAMILY SSF53383 6 416 3.99E-180 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 Gene3D G3DSA:3.90.1150.10 286 416 2.0E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.8E-184 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPTB_RS15515 529623d23d9d125723799d1f28385b5a 417 PIRSF PIRSF000412 1 417 1.3E-168 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 Pfam PF14842 FliG N-terminal domain 23 117 5.0E-20 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 Gene3D G3DSA:1.10.220.30 24 88 7.0E-10 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PANTHER PTHR30534:SF0 8 347 5.3E-92 T 22-04-2016 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 SUPERFAMILY SSF48029 131 338 5.23E-50 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 SUPERFAMILY SSF48029 23 123 1.01E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 Pfam PF01706 FliG C-terminal domain 232 337 3.2E-25 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PANTHER PTHR30534 8 347 5.3E-92 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 Pfam PF14841 FliG middle domain 133 199 1.2E-20 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 286 312 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 262 282 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 240 260 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 Gene3D G3DSA:1.10.220.30 211 345 9.4E-25 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS18095 645e3fffa9cae717d72aac203fd0f4df 347 Gene3D G3DSA:1.10.220.30 92 210 2.4E-25 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 Gene3D G3DSA:3.40.50.720 4 167 6.6E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 SUPERFAMILY SSF51735 4 130 4.17E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 SUPERFAMILY SSF51735 240 272 4.17E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 6.9E-42 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.8E-42 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 SUPERFAMILY SSF55347 131 240 1.37E-37 T 22-04-2016 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 PIRSF PIRSF000161 4 272 1.7E-89 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 PANTHER PTHR20836:SF0 3 273 3.6E-105 T 22-04-2016 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 PANTHER PTHR20836 3 273 3.6E-105 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.085 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS03500 a25bff66703a6ac962407a3fe941c663 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 268 3.6E-105 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 Gene3D G3DSA:3.30.70.20 39 75 1.3E-8 T 22-04-2016 YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 Gene3D G3DSA:3.30.70.20 76 114 7.1E-6 T 22-04-2016 YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 PANTHER PTHR24960 3 160 2.2E-40 T 22-04-2016 YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 SUPERFAMILY SSF54862 33 161 6.91E-20 T 22-04-2016 YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 PANTHER PTHR24960:SF46 3 160 2.2E-40 T 22-04-2016 YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 Pfam PF12838 4Fe-4S dicluster domain 110 157 4.6E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 Pfam PF13187 4Fe-4S dicluster domain 39 84 1.1E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 159 1.1E-46 T 22-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 YPTB_RS14970 3c03ff1a8a29407ae5654afd5049cab3 167 Gene3D G3DSA:3.30.70.20 115 164 1.1E-10 T 22-04-2016 YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF46689 57 158 5.55E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.10 5 53 3.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795 1 171 7.6E-86 T 22-04-2016 YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795:SF1 1 171 7.6E-86 T 22-04-2016 YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 63 115 3.3E-12 T 22-04-2016 YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 8 53 3.7E-9 T 22-04-2016 YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF48295 2 53 8.89E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPTB_RS21055 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.60 60 154 3.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF46689 57 158 5.55E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.10 5 53 3.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795 1 171 7.6E-86 T 22-04-2016 YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795:SF1 1 171 7.6E-86 T 22-04-2016 YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 63 115 3.3E-12 T 22-04-2016 YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 8 53 3.7E-9 T 22-04-2016 YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF48295 2 53 8.89E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPTB_RS17905 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.60 60 154 3.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF46689 57 158 5.55E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.10 5 53 3.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795 1 171 7.6E-86 T 22-04-2016 YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795:SF1 1 171 7.6E-86 T 22-04-2016 YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 63 115 3.3E-12 T 22-04-2016 YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 8 53 3.7E-9 T 22-04-2016 YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF48295 2 53 8.89E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPTB_RS21270 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.60 60 154 3.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PRINTS PR00419 Adrenodoxin reductase family signature 522 535 2.3E-35 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PRINTS PR00419 Adrenodoxin reductase family signature 488 502 2.3E-35 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PRINTS PR00419 Adrenodoxin reductase family signature 411 421 2.3E-35 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PRINTS PR00419 Adrenodoxin reductase family signature 346 368 2.3E-35 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PRINTS PR00419 Adrenodoxin reductase family signature 369 382 2.3E-35 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:3.50.50.60 435 598 3.0E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:3.30.70.20 64 96 1.3E-16 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 SUPERFAMILY SSF54862 2 168 2.34E-44 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 SUPERFAMILY SSF54862 213 307 2.34E-44 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PANTHER PTHR11938:SF93 1 106 0.0 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PANTHER PTHR11938:SF93 298 670 0.0 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 SUPERFAMILY SSF51971 344 599 3.47E-66 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:3.40.50.720 599 668 1.0E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:3.40.50.720 348 434 1.0E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 207 670 2.0E-238 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 345 657 1.2E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 222 331 3.1E-35 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:3.30.70.20 4 63 4.1E-15 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:3.30.70.20 139 170 4.1E-15 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:1.10.1060.10 97 138 2.2E-4 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Pfam PF13247 4Fe-4S dicluster domain 55 153 6.1E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PANTHER PTHR11938 1 106 0.0 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 PANTHER PTHR11938 298 670 0.0 T 22-04-2016 YPTB_RS02285 42af51ffc25ad82d35eeea2a3908ef7a 671 Gene3D G3DSA:1.10.1060.10 203 347 6.3E-47 T 22-04-2016 YPTB_RS13620 13d21a4e0d947d233d78e85df06325f2 316 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 5 299 1.3E-104 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 YPTB_RS13620 13d21a4e0d947d233d78e85df06325f2 316 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 300 1.2E-125 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 9.5E-51 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 PANTHER PTHR33209 1 612 8.6E-246 T 22-04-2016 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 Gene3D G3DSA:3.90.226.10 218 314 1.9E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11430 d4510649a33255487862cfd692230f24 616 Gene3D G3DSA:3.90.226.10 31 175 1.9E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11430 d4510649a33255487862cfd692230f24 616 Gene3D G3DSA:3.90.226.10 467 550 2.6E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11430 d4510649a33255487862cfd692230f24 616 Gene3D G3DSA:3.90.226.10 321 430 2.6E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11430 d4510649a33255487862cfd692230f24 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 6.9E-222 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 PIRSF PIRSF001217 8 616 7.5E-214 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 PANTHER PTHR33209:SF1 1 612 8.6E-246 T 22-04-2016 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 SUPERFAMILY SSF52096 34 179 1.03E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11430 d4510649a33255487862cfd692230f24 616 SUPERFAMILY SSF52096 210 284 1.03E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11430 d4510649a33255487862cfd692230f24 616 Pfam PF01343 Peptidase family S49 139 287 3.6E-35 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 Pfam PF01343 Peptidase family S49 390 541 1.5E-47 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YPTB_RS11430 d4510649a33255487862cfd692230f24 616 SUPERFAMILY SSF52096 466 528 1.33E-40 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11430 d4510649a33255487862cfd692230f24 616 SUPERFAMILY SSF52096 316 438 1.33E-40 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 34.953 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 SUPERFAMILY SSF56784 4 222 1.68E-60 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 221 3.4E-81 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 PANTHER PTHR18901 1 232 6.4E-88 T 22-04-2016 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 Gene3D G3DSA:1.10.150.240 22 82 1.1E-24 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 192 3.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 2.9E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 PANTHER PTHR18901:SF14 1 232 6.4E-88 T 22-04-2016 YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 192 2.1E-36 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS20250 4174fb25135367be12ca543e7875d846 232 Gene3D G3DSA:3.40.50.1000 83 222 5.7E-44 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS18255 43c3a759aeeba87406f3c89fc27f014b 256 SUPERFAMILY SSF48452 55 225 5.06E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS18255 43c3a759aeeba87406f3c89fc27f014b 256 Gene3D G3DSA:1.25.40.10 43 224 4.6E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS02130 ce7b8124ce755d69693635c9268585a0 174 Gene3D G3DSA:3.40.1410.10 10 166 7.5E-58 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS02130 ce7b8124ce755d69693635c9268585a0 174 Pfam PF04345 Chorismate lyase 12 168 8.5E-34 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 YPTB_RS02130 ce7b8124ce755d69693635c9268585a0 174 SUPERFAMILY SSF64288 8 166 4.37E-52 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS02130 ce7b8124ce755d69693635c9268585a0 174 PANTHER PTHR38683 1 172 8.6E-74 T 22-04-2016 YPTB_RS02130 ce7b8124ce755d69693635c9268585a0 174 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.273 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 YPTB_RS04520 4a05d7cf0c8b7dcd334a309a99083b72 276 Gene3D G3DSA:3.40.50.970 3 274 4.2E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS04520 4a05d7cf0c8b7dcd334a309a99083b72 276 PANTHER PTHR11624 7 276 2.5E-81 T 22-04-2016 IPR033247 Transketolase family YPTB_RS04520 4a05d7cf0c8b7dcd334a309a99083b72 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 26 267 1.7E-36 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS04520 4a05d7cf0c8b7dcd334a309a99083b72 276 PANTHER PTHR11624:SF86 7 276 2.5E-81 T 22-04-2016 YPTB_RS04520 4a05d7cf0c8b7dcd334a309a99083b72 276 SUPERFAMILY SSF52518 3 273 1.59E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.30.70.260 627 697 9.5E-7 T 22-04-2016 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 SMART SM00471 41 153 1.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF13291 ACT domain 622 699 2.1E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF81301 180 392 4.25E-62 T 22-04-2016 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 PANTHER PTHR21262:SF0 3 702 0.0 T 22-04-2016 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.10.20.30 387 448 5.2E-22 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 PANTHER PTHR21262 3 702 0.0 T 22-04-2016 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF02824 TGS domain 388 447 1.6E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF109604 3 190 2.39E-75 T 22-04-2016 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF13328 HD domain 26 175 4.0E-53 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 SMART SM00954 235 345 8.8E-62 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF55021 629 699 4.4E-5 T 22-04-2016 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF81271 375 447 3.92E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.30.460.10 178 324 5.1E-47 T 22-04-2016 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.3E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPTB_RS00275 01fc5306585b2b46f6298e05c1e8fb74 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 698 1.2E-286 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 2.0E-102 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 Gene3D G3DSA:3.40.50.300 17 223 1.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 SUPERFAMILY SSF52540 1 220 7.73E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 PANTHER PTHR24220 1 219 1.8E-108 T 22-04-2016 YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 Pfam PF00005 ABC transporter 19 157 8.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 PANTHER PTHR24220:SF439 1 219 1.8E-108 T 22-04-2016 YPTB_RS03695 806cb5dbb51c8a2dfd27c8625f01d94b 236 SMART SM00382 24 209 1.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06305 0a550b3bb80ade678b45b9ddc1fb2ac1 293 Pfam PF01513 ATP-NAD kinase 9 272 2.1E-75 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPTB_RS06305 0a550b3bb80ade678b45b9ddc1fb2ac1 293 SUPERFAMILY SSF111331 9 290 1.96E-93 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain YPTB_RS06305 0a550b3bb80ade678b45b9ddc1fb2ac1 293 PANTHER PTHR20275 3 292 1.7E-112 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPTB_RS06305 0a550b3bb80ade678b45b9ddc1fb2ac1 293 Gene3D G3DSA:2.60.200.30 150 262 4.5E-43 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPTB_RS06305 0a550b3bb80ade678b45b9ddc1fb2ac1 293 Hamap MF_00361 NAD kinase [nadK]. 7 288 33.636 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPTB_RS06305 0a550b3bb80ade678b45b9ddc1fb2ac1 293 Gene3D G3DSA:3.40.50.10330 4 149 1.3E-38 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPTB_RS19575 d41e000723b9ebb380f8c6175b1b1a55 47 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 4 39 2.0E-17 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 YPTB_RS08670 f7e55161066a2d51c9b2493d892142b3 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 275 2.2E-65 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS08670 f7e55161066a2d51c9b2493d892142b3 280 PANTHER PTHR11820 1 278 3.5E-185 T 22-04-2016 YPTB_RS08670 f7e55161066a2d51c9b2493d892142b3 280 SUPERFAMILY SSF56529 62 277 1.14E-79 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS08670 f7e55161066a2d51c9b2493d892142b3 280 PANTHER PTHR11820:SF71 1 278 3.5E-185 T 22-04-2016 YPTB_RS08670 f7e55161066a2d51c9b2493d892142b3 280 Gene3D G3DSA:3.90.850.10 66 276 3.8E-85 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS08270 cd07ef0a02e8acac3fc9bd278f02903a 587 PANTHER PTHR35370:SF4 2 587 0.0 T 22-04-2016 YPTB_RS08270 cd07ef0a02e8acac3fc9bd278f02903a 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 580 2.3E-173 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS08270 cd07ef0a02e8acac3fc9bd278f02903a 587 PANTHER PTHR35370 2 587 0.0 T 22-04-2016 YPTB_RS08270 cd07ef0a02e8acac3fc9bd278f02903a 587 PIRSF PIRSF028304 1 586 8.1E-162 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS08270 cd07ef0a02e8acac3fc9bd278f02903a 587 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 584 5.4E-189 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS00580 498b77ec1d710f6c6099e9ecd51a7794 305 PANTHER PTHR13929:SF0 8 305 1.9E-96 T 22-04-2016 YPTB_RS00580 498b77ec1d710f6c6099e9ecd51a7794 305 PANTHER PTHR13929 8 305 1.9E-96 T 22-04-2016 YPTB_RS00580 498b77ec1d710f6c6099e9ecd51a7794 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.115 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPTB_RS00580 498b77ec1d710f6c6099e9ecd51a7794 305 PIRSF PIRSF005355 2 305 2.1E-87 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 YPTB_RS00580 498b77ec1d710f6c6099e9ecd51a7794 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 2.4E-128 T 22-04-2016 YPTB_RS00580 498b77ec1d710f6c6099e9ecd51a7794 305 Pfam PF01040 UbiA prenyltransferase family 29 276 1.9E-36 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 8.2E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 Gene3D G3DSA:3.30.70.890 169 298 2.4E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 Gene3D G3DSA:3.30.230.10 1 161 6.7E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 SUPERFAMILY SSF55060 173 289 5.4E-33 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 Pfam PF08544 GHMP kinases C terminal 215 280 2.8E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 SUPERFAMILY SSF54211 1 178 3.11E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 6.1E-113 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 29.916 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.7E-32 T 22-04-2016 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.7E-32 T 22-04-2016 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.7E-32 T 22-04-2016 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.7E-32 T 22-04-2016 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.7E-32 T 22-04-2016 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PANTHER PTHR20861 1 309 2.6E-132 T 22-04-2016 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PANTHER PTHR20861:SF1 1 309 2.6E-132 T 22-04-2016 YPTB_RS03400 c10e95095483977bdff48fa3890365fe 309 PIRSF PIRSF000676 1 308 7.7E-83 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 SUPERFAMILY SSF52540 2 194 1.94E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 SUPERFAMILY SSF50447 180 300 2.65E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 SUPERFAMILY SSF50465 280 389 2.45E-5 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 Pfam PF09107 Elongation factor SelB, winged helix 603 646 5.2E-20 T 22-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 SUPERFAMILY SSF46785 590 648 7.26E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PANTHER PTHR23115 1 309 3.2E-131 T 22-04-2016 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PANTHER PTHR23115 326 390 3.2E-131 T 22-04-2016 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.8E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.8E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.8E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.8E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 Gene3D G3DSA:1.10.10.10 590 648 1.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 Gene3D G3DSA:1.10.10.10 456 522 8.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 Gene3D G3DSA:2.40.30.10 184 300 1.6E-27 T 22-04-2016 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 Pfam PF00009 Elongation factor Tu GTP binding domain 2 166 2.6E-31 T 22-04-2016 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 SUPERFAMILY SSF46785 456 524 2.54E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 Pfam PF09106 Elongation factor SelB, winged helix 466 521 2.4E-15 T 22-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 Gene3D G3DSA:3.40.50.300 2 183 2.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PANTHER PTHR23115:SF129 1 309 3.2E-131 T 22-04-2016 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 PANTHER PTHR23115:SF129 326 390 3.2E-131 T 22-04-2016 YPTB_RS21230 85ded451e27cbc2e2c401fd7640e9f71 657 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 648 2.0E-206 T 22-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YPTB_RS00920 4d296d1a64261878a1a87355d9a8a456 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 4.9E-25 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00920 4d296d1a64261878a1a87355d9a8a456 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 39 55 4.9E-25 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00920 4d296d1a64261878a1a87355d9a8a456 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 62 83 4.9E-25 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00920 4d296d1a64261878a1a87355d9a8a456 84 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 83 6.7E-35 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00920 4d296d1a64261878a1a87355d9a8a456 84 SUPERFAMILY SSF47345 4 84 1.44E-33 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00920 4d296d1a64261878a1a87355d9a8a456 84 Gene3D G3DSA:1.10.1200.20 3 84 2.9E-36 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00920 4d296d1a64261878a1a87355d9a8a456 84 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 83 4.0E-38 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 SUPERFAMILY SSF52954 462 571 5.74E-33 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 7.6E-272 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.89E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.89E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.89E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.89E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Pfam PF03129 Anticodon binding domain 475 568 8.4E-21 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 2.4E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PIRSF PIRSF001535 1 572 2.1E-275 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PANTHER PTHR11451:SF3 4 245 2.3E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PANTHER PTHR11451:SF3 399 572 2.3E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 3.3E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Gene3D G3DSA:3.40.50.800 470 570 2.1E-31 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.865 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 SUPERFAMILY SSF55826 218 390 9.03E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 SUPERFAMILY SSF55681 407 478 6.58E-107 T 22-04-2016 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 SUPERFAMILY SSF55681 10 237 6.58E-107 T 22-04-2016 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Gene3D G3DSA:3.30.930.10 407 468 1.4E-108 T 22-04-2016 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Gene3D G3DSA:3.30.930.10 1 228 1.4E-108 T 22-04-2016 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 Gene3D G3DSA:3.90.960.10 254 388 2.9E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PANTHER PTHR11451 4 245 2.3E-161 T 22-04-2016 YPTB_RS16130 77306d7ec8a36c6ab742e095b2aafb9f 572 PANTHER PTHR11451 399 572 2.3E-161 T 22-04-2016 YPTB_RS00810 8dea072c2c76b963285744c559e087f8 330 PANTHER PTHR32196 1 330 1.4E-231 T 22-04-2016 YPTB_RS00810 8dea072c2c76b963285744c559e087f8 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 4.0E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS00810 8dea072c2c76b963285744c559e087f8 330 PANTHER PTHR32196:SF23 1 330 1.4E-231 T 22-04-2016 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 PANTHER PTHR10982 1 309 1.4E-164 T 22-04-2016 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 Gene3D G3DSA:3.40.366.10 2 122 2.1E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 Gene3D G3DSA:3.40.366.10 197 301 2.1E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 7.2E-129 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.9E-39 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 Pfam PF00698 Acyl transferase domain 7 298 1.2E-36 T 22-04-2016 IPR014043 Acyl transferase YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 SUPERFAMILY SSF55048 128 197 4.97E-18 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 PIRSF PIRSF000446 1 309 2.9E-137 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 SUPERFAMILY SSF52151 190 307 1.41E-79 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 SUPERFAMILY SSF52151 4 122 1.41E-79 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS13435 3f2316e9b5de2dffc20c33e578d343f1 309 Gene3D G3DSA:3.30.70.250 125 196 2.7E-31 T 22-04-2016 YPTB_RS03895 fbab78bfd0f5d31b58c90ba72f75f6ed 177 Hamap MF_01332 Secretion monitor [secM]. 1 177 44.155 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPTB_RS03895 fbab78bfd0f5d31b58c90ba72f75f6ed 177 PIRSF PIRSF004572 1 177 3.9E-87 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPTB_RS03895 fbab78bfd0f5d31b58c90ba72f75f6ed 177 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 174 3.6E-59 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPTB_RS03895 fbab78bfd0f5d31b58c90ba72f75f6ed 177 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 177 2.0E-91 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPTB_RS07590 d705acf2ca46add11fdea2965b7ab96e 456 Pfam PF10100 Uncharacterized protein conserved in bacteria (DUF2338) 7 452 7.5E-178 T 22-04-2016 IPR016935 Protein of unknown function DUF2338 YPTB_RS07590 d705acf2ca46add11fdea2965b7ab96e 456 PIRSF PIRSF029692 2 456 1.6E-205 T 22-04-2016 IPR016935 Protein of unknown function DUF2338 YPTB_RS07590 d705acf2ca46add11fdea2965b7ab96e 456 SUPERFAMILY SSF51735 8 144 6.3E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07590 d705acf2ca46add11fdea2965b7ab96e 456 Gene3D G3DSA:3.40.50.720 8 131 2.3E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19760 cf29d2f7aa3b7928caa985ac809d8e40 575 PIRSF PIRSF000719 1 575 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPTB_RS19760 cf29d2f7aa3b7928caa985ac809d8e40 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 5.8E-254 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPTB_RS19760 cf29d2f7aa3b7928caa985ac809d8e40 575 PANTHER PTHR39559 1 575 2.9E-255 T 22-04-2016 YPTB_RS19760 cf29d2f7aa3b7928caa985ac809d8e40 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 7 572 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPTB_RS19760 cf29d2f7aa3b7928caa985ac809d8e40 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 44.116 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 SMART SM00267 420 592 1.0E-57 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 SUPERFAMILY SSF55785 298 418 3.74E-16 T 22-04-2016 IPR000014 PAS domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 PANTHER PTHR33121 505 851 3.8E-80 T 22-04-2016 YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 Gene3D G3DSA:3.20.20.450 605 846 1.0E-92 T 22-04-2016 IPR001633 EAL domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 PANTHER PTHR33121:SF13 505 851 3.8E-80 T 22-04-2016 YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 305 426 8.0E-13 T 22-04-2016 IPR000014 PAS domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 SUPERFAMILY SSF141868 608 847 1.23E-87 T 22-04-2016 IPR001633 EAL domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 427 590 1.9E-40 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 Pfam PF05228 CHASE4 domain 68 227 5.7E-18 T 22-04-2016 IPR007892 CHASE4 YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 SUPERFAMILY SSF55073 436 593 1.1E-46 T 22-04-2016 IPR029787 Nucleotide cyclase YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 Gene3D G3DSA:3.30.70.270 433 600 3.8E-52 T 22-04-2016 YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 SMART SM00052 602 844 6.8E-112 T 22-04-2016 IPR001633 EAL domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 Gene3D G3DSA:3.30.450.20 299 418 9.7E-18 T 22-04-2016 YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 Pfam PF00563 EAL domain 610 839 2.2E-70 T 22-04-2016 IPR001633 EAL domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 Pfam PF00990 Diguanylate cyclase, GGDEF domain 432 588 6.1E-46 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 Pfam PF00989 PAS fold 308 416 7.0E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPTB_RS17900 6b957297258521e5fbabcfcbd822441d 855 SMART SM00091 308 373 1.9E-5 T 22-04-2016 IPR000014 PAS domain YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 Pfam PF00005 ABC transporter 23 182 3.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 Gene3D G3DSA:3.40.50.300 2 252 9.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 PANTHER PTHR24220:SF358 129 255 2.5E-125 T 22-04-2016 YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 PANTHER PTHR24220:SF358 8 113 2.5E-125 T 22-04-2016 YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 SMART SM00382 31 231 8.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 SUPERFAMILY SSF52540 5 253 1.78E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 PANTHER PTHR24220 129 255 2.5E-125 T 22-04-2016 YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 PANTHER PTHR24220 8 113 2.5E-125 T 22-04-2016 YPTB_RS01360 2ca23ea286ae5e2ca8c74c5c655ef564 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 8.1E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPTB_RS07605 b156399faa7b0f7802c2feee3147d610 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 214 9.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07605 b156399faa7b0f7802c2feee3147d610 222 SUPERFAMILY SSF161098 6 200 1.83E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07605 b156399faa7b0f7802c2feee3147d610 222 Gene3D G3DSA:1.10.3720.10 4 214 1.4E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07605 b156399faa7b0f7802c2feee3147d610 222 PANTHER PTHR30614:SF10 1 221 7.1E-161 T 22-04-2016 YPTB_RS07605 b156399faa7b0f7802c2feee3147d610 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.9E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS07605 b156399faa7b0f7802c2feee3147d610 222 PANTHER PTHR30614 1 221 7.1E-161 T 22-04-2016 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 SMART SM00387 347 458 5.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 304 2.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 SUPERFAMILY SSF158472 186 230 6.02E-5 T 22-04-2016 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 Pfam PF00672 HAMP domain 164 231 8.7E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 SUPERFAMILY SSF47384 221 305 4.71E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 Gene3D G3DSA:1.10.287.130 230 290 7.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 SMART SM00388 238 304 1.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 449 1.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 PANTHER PTHR24423:SF354 178 449 8.0E-70 T 22-04-2016 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 PANTHER PTHR24423:SF354 1 8 8.0E-70 T 22-04-2016 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 SUPERFAMILY SSF55874 293 449 1.1E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 454 9.7E-121 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 PANTHER PTHR24423 178 449 8.0E-70 T 22-04-2016 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 PANTHER PTHR24423 1 8 8.0E-70 T 22-04-2016 YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 Gene3D G3DSA:3.30.565.10 291 454 7.3E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10920 2f56d739a8a6bfa45980f3f4689c34b7 461 SMART SM00304 184 237 1.5E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PANTHER PTHR24322 13 140 3.0E-88 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PANTHER PTHR24322 156 187 3.0E-88 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 1.9E-56 T 22-04-2016 YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 Gene3D G3DSA:3.40.50.720 3 250 1.9E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PANTHER PTHR24322:SF402 13 140 3.0E-88 T 22-04-2016 YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 PANTHER PTHR24322:SF402 156 187 3.0E-88 T 22-04-2016 YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 251 9.6E-133 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 SUPERFAMILY SSF51735 3 250 4.74E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS16685 cfebeaa8852f0de1b16a578e7ad63aaa 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PANTHER PTHR18895:SF73 37 238 4.7E-94 T 22-04-2016 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PANTHER PTHR18895 37 238 4.7E-94 T 22-04-2016 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 Gene3D G3DSA:3.40.50.150 35 240 3.6E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 Pfam PF05175 Methyltransferase small domain 44 179 4.1E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 119 131 3.2E-5 T 22-04-2016 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 149 173 3.2E-5 T 22-04-2016 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 51 65 3.2E-5 T 22-04-2016 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 14 248 56.536 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 YPTB_RS15665 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 SUPERFAMILY SSF53335 16 202 5.08E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10305 f145fb85c561c7b8083028dd056d0465 565 Pfam PF13455 Meiotically up-regulated gene 113 450 524 3.3E-13 T 22-04-2016 YPTB_RS10305 f145fb85c561c7b8083028dd056d0465 565 Pfam PF13250 Domain of unknown function (DUF4041) 274 329 1.9E-13 T 22-04-2016 IPR025280 Domain of unknown function DUF4041 YPTB_RS10305 f145fb85c561c7b8083028dd056d0465 565 SMART SM00974 444 527 3.4E-33 T 22-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding YPTB_RS18075 d43cf4e951fc18bd3fd2c1f56851b246 141 Gene3D G3DSA:1.20.58.300 7 130 9.0E-24 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPTB_RS18075 d43cf4e951fc18bd3fd2c1f56851b246 141 Pfam PF05130 FlgN protein 6 130 1.1E-14 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPTB_RS18075 d43cf4e951fc18bd3fd2c1f56851b246 141 SUPERFAMILY SSF140566 7 130 1.2E-22 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 8.3E-36 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 PANTHER PTHR33254 1 161 2.6E-110 T 22-04-2016 YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 SUPERFAMILY SSF89562 2 158 4.71E-44 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 PANTHER PTHR33254:SF7 1 161 2.6E-110 T 22-04-2016 YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 Gene3D G3DSA:3.50.30.40 1 156 3.7E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 7.1E-87 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.484 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YPTB_RS00575 2409a8f5766ea4714ead9159156f689f 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.8E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 73.386 T 22-04-2016 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 SUPERFAMILY SSF52540 74 354 1.13E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 Pfam PF00271 Helicase conserved C-terminal domain 240 337 1.5E-27 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 3.0E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 Gene3D G3DSA:3.40.50.300 215 372 2.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 Pfam PF03880 DbpA RNA binding domain 387 457 5.4E-23 T 22-04-2016 IPR005580 DbpA, RNA-binding domain YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 SMART SM00487 23 220 4.4E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 SMART SM00490 256 337 4.1E-30 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 PANTHER PTHR24031:SF180 1 439 1.5E-266 T 22-04-2016 YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 Gene3D G3DSA:3.40.50.300 3 210 6.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09100 e94aacdd6d663ce49cccc1b4d43ca8cb 460 PANTHER PTHR24031 1 439 1.5E-266 T 22-04-2016 YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 Gene3D G3DSA:3.40.50.300 1 239 8.6E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 SMART SM00382 28 215 4.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 PIRSF PIRSF039085 1 243 5.8E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 SUPERFAMILY SSF52540 3 236 1.03E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 PANTHER PTHR24220 5 247 1.8E-161 T 22-04-2016 YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 Pfam PF00005 ABC transporter 19 167 3.2E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS04840 41d8782fb50ec969473b798e995aa09c 248 PANTHER PTHR24220:SF550 5 247 1.8E-161 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 PANTHER PTHR11102 545 719 2.6E-127 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 SUPERFAMILY SSF82185 422 547 9.81E-20 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 SMART SM00671 635 670 7.4E-9 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 SMART SM00671 567 598 1.6 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 SMART SM00671 671 706 7.4E-8 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 SMART SM00671 599 634 9.4E-4 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 PANTHER PTHR11102:SF73 221 267 2.6E-127 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 PANTHER PTHR11102:SF73 545 719 2.6E-127 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF08238 Sel1 repeat 635 670 2.0E-7 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF08238 Sel1 repeat 672 705 3.4E-5 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF08238 Sel1 repeat 600 633 0.015 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF08238 Sel1 repeat 581 597 1.0 T 22-04-2016 IPR006597 Sel1-like repeat YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Gene3D G3DSA:1.25.40.10 559 719 6.3E-47 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 PANTHER PTHR11102 221 267 2.6E-127 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Gene3D G3DSA:2.20.110.10 284 393 1.3E-8 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Gene3D G3DSA:2.20.110.10 394 502 9.3E-9 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Gene3D G3DSA:2.20.110.10 200 281 2.2E-4 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 SUPERFAMILY SSF82185 229 352 1.24E-20 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 SUPERFAMILY SSF81901 569 711 2.88E-33 T 22-04-2016 YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 211 228 0.36 T 22-04-2016 IPR011652 MORN variant YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 457 472 0.32 T 22-04-2016 IPR011652 MORN variant YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 307 326 0.017 T 22-04-2016 IPR011652 MORN variant YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 259 278 0.14 T 22-04-2016 IPR011652 MORN variant YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 384 400 0.48 T 22-04-2016 IPR011652 MORN variant YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 284 304 0.19 T 22-04-2016 IPR011652 MORN variant YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 357 376 0.016 T 22-04-2016 IPR011652 MORN variant YPTB_RS10860 2136a30aa2f449b5a5765da45dcf23ec 720 Pfam PF07661 MORN repeat variant 404 425 0.065 T 22-04-2016 IPR011652 MORN variant YPTB_RS11965 c76ccc949c56b715590723a955160279 426 Pfam PF00654 Voltage gated chloride channel 77 416 3.6E-76 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 SUPERFAMILY SSF81340 5 425 4.05E-87 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 16 426 40.469 T 22-04-2016 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 Gene3D G3DSA:1.10.3080.10 12 426 1.1E-75 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 PANTHER PTHR11689 1 426 1.1E-77 T 22-04-2016 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 PRINTS PR00762 Chloride channel signature 365 381 4.1E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 PRINTS PR00762 Chloride channel signature 383 402 4.1E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 PRINTS PR00762 Chloride channel signature 116 135 4.1E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 PRINTS PR00762 Chloride channel signature 330 350 4.1E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS11965 c76ccc949c56b715590723a955160279 426 PRINTS PR00762 Chloride channel signature 166 185 4.1E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS11845 01cb15d94781278bed97904302710104 715 SMART SM00382 489 691 1.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11845 01cb15d94781278bed97904302710104 715 PANTHER PTHR24221:SF246 131 708 6.3E-221 T 22-04-2016 YPTB_RS11845 01cb15d94781278bed97904302710104 715 ProSitePatterns PS00211 ABC transporters family signature. 601 615 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS11845 01cb15d94781278bed97904302710104 715 PANTHER PTHR24221 131 708 6.3E-221 T 22-04-2016 YPTB_RS11845 01cb15d94781278bed97904302710104 715 Pfam PF00664 ABC transporter transmembrane region 151 418 5.9E-50 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS11845 01cb15d94781278bed97904302710104 715 Pfam PF00005 ABC transporter 480 629 3.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS11845 01cb15d94781278bed97904302710104 715 Gene3D G3DSA:1.20.1560.10 135 448 1.6E-70 T 22-04-2016 YPTB_RS11845 01cb15d94781278bed97904302710104 715 Gene3D G3DSA:3.40.50.300 463 694 8.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11845 01cb15d94781278bed97904302710104 715 SUPERFAMILY SSF52540 453 699 4.11E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11845 01cb15d94781278bed97904302710104 715 Gene3D G3DSA:3.90.70.10 50 128 8.6E-7 T 22-04-2016 YPTB_RS11845 01cb15d94781278bed97904302710104 715 SUPERFAMILY SSF90123 135 452 2.09E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS11845 01cb15d94781278bed97904302710104 715 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 44 700 1.2E-232 T 22-04-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YPTB_RS13095 6c5cbd043400e9ed37296899af286812 295 PANTHER PTHR30433:SF4 1 289 1.5E-194 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPTB_RS13095 6c5cbd043400e9ed37296899af286812 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site YPTB_RS13095 6c5cbd043400e9ed37296899af286812 295 PANTHER PTHR30433 1 289 1.5E-194 T 22-04-2016 YPTB_RS13095 6c5cbd043400e9ed37296899af286812 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 2.8E-119 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPTB_RS13095 6c5cbd043400e9ed37296899af286812 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 3.0E-11 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220 7 55 7.5E-113 T 22-04-2016 YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220 74 267 7.5E-113 T 22-04-2016 YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 Pfam PF00005 ABC transporter 22 191 3.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220:SF442 7 55 7.5E-113 T 22-04-2016 YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220:SF442 74 267 7.5E-113 T 22-04-2016 YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 Gene3D G3DSA:3.40.50.300 5 261 5.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 SMART SM00382 29 241 5.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS02965 2f12514e60ce1e8ca2add5d877b4c481 292 SUPERFAMILY SSF52540 10 245 1.16E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 Gene3D G3DSA:3.40.50.300 3 245 2.7E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 PIRSF PIRSF039085 1 249 7.8E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 SUPERFAMILY SSF52540 4 243 3.17E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 Pfam PF00005 ABC transporter 19 173 5.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 PANTHER PTHR24220:SF327 5 252 1.1E-147 T 22-04-2016 YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 PANTHER PTHR24220 5 252 1.1E-147 T 22-04-2016 YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 SMART SM00382 28 221 6.7E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS09455 0958ae21fdd1393d21e0753ff05a5911 253 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 304 2.0E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 PANTHER PTHR24220:SF493 12 328 9.1E-217 T 22-04-2016 YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 3.6E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 SMART SM00382 45 237 2.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 Pfam PF00005 ABC transporter 36 187 2.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 Gene3D G3DSA:3.40.50.300 9 261 5.4E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 SUPERFAMILY SSF52540 21 259 5.45E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20745 cd40a5209a8ceddfd7d9dbcadf2d91b6 335 PANTHER PTHR24220 12 328 9.1E-217 T 22-04-2016 YPTB_RS13080 1ba1922c11d3deede158863161808a4f 165 SUPERFAMILY SSF50341 17 158 2.09E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPTB_RS13080 1ba1922c11d3deede158863161808a4f 165 Gene3D G3DSA:2.40.50.180 56 92 1.6E-10 T 22-04-2016 YPTB_RS13080 1ba1922c11d3deede158863161808a4f 165 Pfam PF01584 CheW-like domain 18 154 2.2E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPTB_RS13080 1ba1922c11d3deede158863161808a4f 165 Gene3D G3DSA:2.30.30.40 93 144 7.0E-9 T 22-04-2016 YPTB_RS13080 1ba1922c11d3deede158863161808a4f 165 SMART SM00260 14 151 4.8E-43 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPTB_RS13080 1ba1922c11d3deede158863161808a4f 165 PANTHER PTHR22617 1 165 2.3E-57 T 22-04-2016 YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 SUPERFAMILY SSF52467 185 369 3.27E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 Gene3D G3DSA:3.40.50.970 2 211 3.9E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 437 596 2.2E-39 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 196 8.8E-33 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 639 1.8E-279 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 9.7E-31 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 SUPERFAMILY SSF52518 414 632 3.93E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 Gene3D G3DSA:3.40.50.970 412 616 2.7E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 473 492 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 Gene3D G3DSA:3.40.50.1220 212 362 6.3E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 SUPERFAMILY SSF52518 1 209 6.63E-33 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 PANTHER PTHR18968 2 641 0.0 T 22-04-2016 YPTB_RS05910 0d7c1835e662bdef08936dc3cdf0c414 641 PANTHER PTHR18968:SF9 2 641 0.0 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 PANTHER PTHR23309:SF6 41 774 0.0 T 22-04-2016 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Pfam PF00378 Enoyl-CoA hydratase/isomerase 52 237 1.7E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Gene3D G3DSA:1.10.1040.10 528 619 1.4E-27 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 SUPERFAMILY SSF48179 675 766 2.64E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Gene3D G3DSA:3.90.226.10 37 237 1.4E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 40 766 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 SUPERFAMILY SSF48179 526 623 3.32E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 PANTHER PTHR23309 41 774 0.0 T 22-04-2016 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Gene3D G3DSA:3.40.50.720 339 527 2.3E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 345 523 1.5E-56 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 SUPERFAMILY SSF51735 342 523 2.03E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 523 548 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 35 766 54.547 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 SUPERFAMILY SSF52096 38 333 3.77E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 526 619 5.0E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 676 762 4.7E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14290 f91c01f8408f387df8d92c5a3c11a91f 780 Gene3D G3DSA:1.10.1040.10 685 765 3.1E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 Pfam PF00534 Glycosyl transferases group 1 287 448 8.4E-16 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 Pfam PF08323 Starch synthase catalytic domain 2 233 1.9E-70 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 PANTHER PTHR12526 1 476 3.1E-157 T 22-04-2016 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 Gene3D G3DSA:3.40.50.2000 250 457 1.7E-71 T 22-04-2016 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 SUPERFAMILY SSF53756 1 476 5.23E-116 T 22-04-2016 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.804 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 PANTHER PTHR12526:SF17 1 476 3.1E-157 T 22-04-2016 YPTB_RS20465 e96d29eb08061bb34e11d3e35610cece 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 1.4E-168 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 PIRSF PIRSF002070 2 163 1.1E-40 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 Gene3D G3DSA:2.40.50.140 151 182 5.3E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 Gene3D G3DSA:2.40.50.140 4 116 5.3E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 SUPERFAMILY SSF50249 4 182 3.77E-63 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 Pfam PF00436 Single-strand binding protein family 6 112 5.1E-44 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 PANTHER PTHR10302 4 182 3.9E-63 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.47 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPTB_RS02200 610951319ea2fd167b536c244bad4baf 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 1.0E-61 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 PANTHER PTHR30146 4 330 7.2E-236 T 22-04-2016 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 Gene3D G3DSA:1.10.260.40 4 52 1.3E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 4.6E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 SMART SM00354 5 75 6.0E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 Gene3D G3DSA:3.40.50.2300 62 173 9.2E-33 T 22-04-2016 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 Gene3D G3DSA:3.40.50.2300 174 328 1.4E-38 T 22-04-2016 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 PANTHER PTHR30146:SF37 4 330 7.2E-236 T 22-04-2016 YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 SUPERFAMILY SSF53822 62 324 2.54E-51 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 311 3.0E-23 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB_RS13945 d6ecb751c0ad8189579cb8e08f62e597 330 SUPERFAMILY SSF47413 4 53 7.31E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS15930 5995a3dc90617603d7a6d0f63cafbb6e 221 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS15930 5995a3dc90617603d7a6d0f63cafbb6e 221 PANTHER PTHR24220 3 194 1.4E-94 T 22-04-2016 YPTB_RS15930 5995a3dc90617603d7a6d0f63cafbb6e 221 SMART SM00382 26 199 1.7E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS15930 5995a3dc90617603d7a6d0f63cafbb6e 221 Gene3D G3DSA:3.40.50.300 1 194 8.9E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15930 5995a3dc90617603d7a6d0f63cafbb6e 221 PANTHER PTHR24220:SF486 3 194 1.4E-94 T 22-04-2016 YPTB_RS15930 5995a3dc90617603d7a6d0f63cafbb6e 221 Pfam PF00005 ABC transporter 19 150 3.3E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS15930 5995a3dc90617603d7a6d0f63cafbb6e 221 SUPERFAMILY SSF52540 2 194 6.09E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05110 128bac69272492c5ee7afdebb0f0c1de 439 PANTHER PTHR30588:SF0 2 439 5.6E-239 T 22-04-2016 YPTB_RS05110 128bac69272492c5ee7afdebb0f0c1de 439 Pfam PF05525 Branched-chain amino acid transport protein 7 426 2.8E-152 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YPTB_RS05110 128bac69272492c5ee7afdebb0f0c1de 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.2E-155 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YPTB_RS05110 128bac69272492c5ee7afdebb0f0c1de 439 PANTHER PTHR30588 2 439 5.6E-239 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YPTB_RS07865 fde537e3711c34f9bb5bc0357722fa5e 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.6E-123 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPTB_RS07865 fde537e3711c34f9bb5bc0357722fa5e 250 Gene3D G3DSA:3.90.550.10 1 247 1.4E-85 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS07865 fde537e3711c34f9bb5bc0357722fa5e 250 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.648 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPTB_RS07865 fde537e3711c34f9bb5bc0357722fa5e 250 SUPERFAMILY SSF53448 3 247 4.51E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS07865 fde537e3711c34f9bb5bc0357722fa5e 250 Pfam PF02348 Cytidylyltransferase 4 221 4.5E-68 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPTB_RS07865 fde537e3711c34f9bb5bc0357722fa5e 250 PANTHER PTHR21485 1 250 3.0E-125 T 22-04-2016 YPTB_RS07865 fde537e3711c34f9bb5bc0357722fa5e 250 PANTHER PTHR21485:SF4 1 250 3.0E-125 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPTB_RS19095 4481fac7783ea2f498583a38d842c6be 160 SUPERFAMILY SSF55804 8 154 1.44E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPTB_RS19095 4481fac7783ea2f498583a38d842c6be 160 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 8 154 1.2E-59 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS19095 4481fac7783ea2f498583a38d842c6be 160 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS19095 4481fac7783ea2f498583a38d842c6be 160 PANTHER PTHR30505 7 160 3.2E-81 T 22-04-2016 YPTB_RS19095 4481fac7783ea2f498583a38d842c6be 160 Gene3D G3DSA:3.40.930.10 5 154 1.9E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS19095 4481fac7783ea2f498583a38d842c6be 160 PANTHER PTHR30505:SF6 7 160 3.2E-81 T 22-04-2016 YPTB_RS19095 4481fac7783ea2f498583a38d842c6be 160 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 2.5E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS05140 384323a82ef4ea13f5ec605410948793 200 PANTHER PTHR10681 1 194 3.2E-84 T 22-04-2016 YPTB_RS05140 384323a82ef4ea13f5ec605410948793 200 SUPERFAMILY SSF52833 1 194 3.69E-65 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS05140 384323a82ef4ea13f5ec605410948793 200 Gene3D G3DSA:3.40.30.10 4 159 1.1E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS05140 384323a82ef4ea13f5ec605410948793 200 PIRSF PIRSF000239 1 199 6.1E-58 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 YPTB_RS05140 384323a82ef4ea13f5ec605410948793 200 Pfam PF00578 AhpC/TSA family 5 139 1.8E-35 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YPTB_RS05140 384323a82ef4ea13f5ec605410948793 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 6.3E-11 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YPTB_RS05140 384323a82ef4ea13f5ec605410948793 200 Gene3D G3DSA:3.30.1020.10 160 193 2.5E-12 T 22-04-2016 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 PANTHER PTHR11496 1 385 4.0E-246 T 22-04-2016 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 PANTHER PTHR11496:SF65 1 385 4.0E-246 T 22-04-2016 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 358 6.3E-90 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 Gene3D G3DSA:3.40.50.1970 1 182 4.9E-55 T 22-04-2016 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 Gene3D G3DSA:1.20.1090.10 183 384 1.9E-52 T 22-04-2016 YPTB_RS18300 af9d6c7644445b29d75af4559d1832ac 385 SUPERFAMILY SSF56796 1 384 1.22E-107 T 22-04-2016 YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 PANTHER PTHR33209 2 348 1.1E-225 T 22-04-2016 YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 Gene3D G3DSA:3.90.226.10 101 204 1.6E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 Gene3D G3DSA:3.90.226.10 270 300 1.6E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 SUPERFAMILY SSF52096 96 208 1.1E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 SUPERFAMILY SSF52096 239 298 1.1E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 Pfam PF01343 Peptidase family S49 160 304 3.4E-45 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 PANTHER PTHR33209:SF2 2 348 1.1E-225 T 22-04-2016 YPTB_RS11685 75456db55a354ea596218c5ff0193008 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.4E-58 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 SUPERFAMILY SSF53850 89 295 1.32E-40 T 22-04-2016 YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 SUPERFAMILY SSF46785 4 112 1.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 PANTHER PTHR30537:SF17 1 310 1.7E-203 T 22-04-2016 YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 PANTHER PTHR30537 1 310 1.7E-203 T 22-04-2016 YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 Pfam PF03466 LysR substrate binding domain 89 293 4.2E-38 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 Gene3D G3DSA:3.40.190.10 92 176 6.7E-22 T 22-04-2016 YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 Gene3D G3DSA:3.40.190.10 177 261 3.6E-9 T 22-04-2016 YPTB_RS18535 6beebec672294ad9d5dce1f702308c7b 318 Gene3D G3DSA:1.10.10.10 4 84 4.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12590 2a789af220becaf3ce4ba4b8ede4db7e 140 PANTHER PTHR12735 1 139 4.1E-70 T 22-04-2016 YPTB_RS12590 2a789af220becaf3ce4ba4b8ede4db7e 140 PANTHER PTHR12735:SF26 1 139 4.1E-70 T 22-04-2016 YPTB_RS12590 2a789af220becaf3ce4ba4b8ede4db7e 140 Pfam PF02657 Fe-S metabolism associated domain 12 132 2.4E-43 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 YPTB_RS12590 2a789af220becaf3ce4ba4b8ede4db7e 140 Gene3D G3DSA:3.90.1010.10 5 138 1.5E-51 T 22-04-2016 YPTB_RS12590 2a789af220becaf3ce4ba4b8ede4db7e 140 SUPERFAMILY SSF82649 4 135 1.26E-45 T 22-04-2016 YPTB_RS12590 2a789af220becaf3ce4ba4b8ede4db7e 140 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 43.434 T 22-04-2016 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 UniPathway: UPA00266 YPTB_RS07255 a933db2476a3541ff15a435bb1741237 233 Gene3D G3DSA:1.20.144.10 25 201 3.4E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07255 a933db2476a3541ff15a435bb1741237 233 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 42.056 T 22-04-2016 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 UniPathway: UPA00030 YPTB_RS07255 a933db2476a3541ff15a435bb1741237 233 SMART SM00014 95 210 2.2E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07255 a933db2476a3541ff15a435bb1741237 233 Pfam PF01569 PAP2 superfamily 98 201 6.2E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07255 a933db2476a3541ff15a435bb1741237 233 SUPERFAMILY SSF48317 13 222 7.46E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 PANTHER PTHR10314 74 131 1.9E-30 T 22-04-2016 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 PANTHER PTHR10314 18 51 1.9E-30 T 22-04-2016 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 PANTHER PTHR10314:SF4 74 131 1.9E-30 T 22-04-2016 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 PANTHER PTHR10314:SF4 18 51 1.9E-30 T 22-04-2016 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 Gene3D G3DSA:3.20.20.70 1 267 2.0E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 SUPERFAMILY SSF51366 1 266 8.48E-92 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.5E-96 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.2E-102 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS11620 fead03c591d46cc976d3edac84f6259f 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.56 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS05795 2a735456384e18c8d56002056055c34a 329 SUPERFAMILY SSF51430 1 314 1.19E-101 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS05795 2a735456384e18c8d56002056055c34a 329 PANTHER PTHR11732 1 327 1.4E-217 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS05795 2a735456384e18c8d56002056055c34a 329 PANTHER PTHR11732:SF269 1 327 1.4E-217 T 22-04-2016 YPTB_RS05795 2a735456384e18c8d56002056055c34a 329 Pfam PF00248 Aldo/keto reductase family 16 308 1.5E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS05795 2a735456384e18c8d56002056055c34a 329 Gene3D G3DSA:3.20.20.100 1 323 4.1E-114 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS03460 3e4d4a45eb2b8cfecfba22d75630d56c 87 SUPERFAMILY SSF46992 3 86 1.44E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS03460 3e4d4a45eb2b8cfecfba22d75630d56c 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.359 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS03460 3e4d4a45eb2b8cfecfba22d75630d56c 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 1.0E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS03460 3e4d4a45eb2b8cfecfba22d75630d56c 87 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS03460 3e4d4a45eb2b8cfecfba22d75630d56c 87 PANTHER PTHR33398 2 86 4.8E-41 T 22-04-2016 YPTB_RS03460 3e4d4a45eb2b8cfecfba22d75630d56c 87 Gene3D G3DSA:1.20.58.110 3 87 1.9E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS03460 3e4d4a45eb2b8cfecfba22d75630d56c 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.2E-33 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS08770 e30b24058fef793ba8075f9fad711716 267 Gene3D G3DSA:3.40.50.1820 8 126 3.0E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08770 e30b24058fef793ba8075f9fad711716 267 Gene3D G3DSA:3.40.50.1820 180 240 3.0E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08770 e30b24058fef793ba8075f9fad711716 267 SUPERFAMILY SSF53474 9 246 1.41E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08770 e30b24058fef793ba8075f9fad711716 267 PANTHER PTHR11487:SF3 2 258 7.4E-123 T 22-04-2016 YPTB_RS08770 e30b24058fef793ba8075f9fad711716 267 Pfam PF00975 Thioesterase domain 20 249 6.2E-67 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPTB_RS08770 e30b24058fef793ba8075f9fad711716 267 PANTHER PTHR11487 2 258 7.4E-123 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 YPTB_RS09450 bfe99a46818afd4559fc18a48187ca59 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 1.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS09450 bfe99a46818afd4559fc18a48187ca59 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.2E-33 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS09450 bfe99a46818afd4559fc18a48187ca59 220 PANTHER PTHR30614:SF18 5 220 2.7E-123 T 22-04-2016 YPTB_RS09450 bfe99a46818afd4559fc18a48187ca59 220 SUPERFAMILY SSF161098 13 206 1.96E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS09450 bfe99a46818afd4559fc18a48187ca59 220 Gene3D G3DSA:1.10.3720.10 11 216 3.1E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS09450 bfe99a46818afd4559fc18a48187ca59 220 PANTHER PTHR30614 5 220 2.7E-123 T 22-04-2016 YPTB_RS06105 7afa322bf220e9636b96e933b36cf5d0 515 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 459 1.6E-108 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 YPTB_RS06105 7afa322bf220e9636b96e933b36cf5d0 515 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 4.1E-38 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS06105 7afa322bf220e9636b96e933b36cf5d0 515 SUPERFAMILY SSF56317 216 491 5.49E-40 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS06105 7afa322bf220e9636b96e933b36cf5d0 515 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 496 24.545 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 YPTB_RS06105 7afa322bf220e9636b96e933b36cf5d0 515 PANTHER PTHR38686 2 515 2.2E-185 T 22-04-2016 YPTB_RS06105 7afa322bf220e9636b96e933b36cf5d0 515 Gene3D G3DSA:3.60.110.10 216 488 2.2E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS13075 8974ee9c2fdfb993f176aae725548e36 939 PANTHER PTHR38434:SF1 1 939 1.0E-203 T 22-04-2016 YPTB_RS13075 8974ee9c2fdfb993f176aae725548e36 939 PANTHER PTHR38434 1 939 1.0E-203 T 22-04-2016 YPTB_RS13075 8974ee9c2fdfb993f176aae725548e36 939 Pfam PF10101 Predicted membrane protein (DUF2339) 173 931 1.2E-138 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane YPTB_RS13075 8974ee9c2fdfb993f176aae725548e36 939 PIRSF PIRSF035905 1 939 0.0 T 22-04-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 Gene3D G3DSA:1.10.8.60 143 222 1.3E-37 T 22-04-2016 YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 7.3E-102 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 SUPERFAMILY SSF48019 212 335 4.93E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 9.1E-64 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 1.1E-44 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 PANTHER PTHR34388 1 342 2.6E-93 T 22-04-2016 YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 Gene3D G3DSA:3.40.50.300 1 140 2.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 Gene3D G3DSA:1.20.272.20 223 341 1.8E-52 T 22-04-2016 YPTB_RS06065 56f860eeac67cf12078d5411b1e50a82 344 SUPERFAMILY SSF52540 1 210 6.54E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 PANTHER PTHR10233 18 337 2.7E-138 T 22-04-2016 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 PANTHER PTHR10233:SF6 18 337 2.7E-138 T 22-04-2016 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 SUPERFAMILY SSF100950 16 339 4.37E-106 T 22-04-2016 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 13 333 1.7E-126 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 Gene3D G3DSA:1.20.120.420 12 151 1.5E-37 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 Pfam PF01008 Initiation factor 2 subunit family 53 334 5.9E-64 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 Gene3D G3DSA:3.40.50.10470 152 338 1.2E-65 T 22-04-2016 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 3 345 35.682 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YPTB_RS04880 9f1cc74d8ccfaa382d3cefd699cc69a3 346 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 40 334 4.9E-90 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 SMART SM00448 2 112 6.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 Gene3D G3DSA:3.40.50.2300 2 124 1.1E-29 T 22-04-2016 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 SUPERFAMILY SSF46894 145 240 1.22E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.1E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402 147 245 3.3E-162 T 22-04-2016 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402 2 130 3.3E-162 T 22-04-2016 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 SMART SM00862 163 239 3.1E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 SUPERFAMILY SSF52172 2 127 3.42E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 Gene3D G3DSA:1.10.10.10 143 242 1.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402:SF548 147 245 3.3E-162 T 22-04-2016 YPTB_RS12165 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402:SF548 2 130 3.3E-162 T 22-04-2016 YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 SUPERFAMILY SSF50891 88 214 4.55E-44 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 Gene3D G3DSA:3.30.1360.40 5 78 7.1E-7 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 SMART SM00796 4 202 1.3E-89 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 1.7E-66 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 PANTHER PTHR34698:SF2 2 215 2.6E-86 T 22-04-2016 YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 PANTHER PTHR34698 2 215 2.6E-86 T 22-04-2016 YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 Gene3D G3DSA:2.40.100.10 88 214 2.0E-50 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.5E-89 T 22-04-2016 IPR010016 KipI family YPTB_RS15725 dc546c8638cda6e304e1fdfcf9bb52ee 218 SUPERFAMILY SSF160467 5 92 8.89E-9 T 22-04-2016 YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 9.2E-66 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 PANTHER PTHR23117 1 180 2.2E-102 T 22-04-2016 YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 Gene3D G3DSA:3.40.50.300 3 24 7.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 Gene3D G3DSA:3.40.50.300 72 178 7.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 PANTHER PTHR23117:SF8 1 180 2.2E-102 T 22-04-2016 YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 Pfam PF13238 AAA domain 5 138 1.2E-8 T 22-04-2016 YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 178 36.483 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 SMART SM00072 1 181 1.7E-12 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPTB_RS02905 65bcd2d1704d03a933c6ddf8811b706a 193 SUPERFAMILY SSF52540 1 177 1.13E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 Gene3D G3DSA:3.90.1310.10 131 253 2.6E-39 T 22-04-2016 YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 3.8E-236 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 PANTHER PTHR30627 6 626 1.5E-281 T 22-04-2016 YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 PANTHER PTHR30627:SF2 6 626 1.5E-281 T 22-04-2016 YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 Gene3D G3DSA:3.40.710.10 254 610 4.6E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 2.0E-83 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 SUPERFAMILY SSF56519 57 254 2.22E-52 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 4.0E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPTB_RS06045 243320f7a2be3ab8b475b0a87178fb06 631 SUPERFAMILY SSF56601 255 610 2.56E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Pfam PF02911 Formyl transferase, C-terminal domain 203 283 1.4E-16 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 PIRSF PIRSF036506 1 660 0.0 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 PANTHER PTHR10366:SF253 317 659 2.2E-189 T 22-04-2016 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 SUPERFAMILY SSF53328 1 202 1.28E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Gene3D G3DSA:3.90.25.10 570 641 3.1E-43 T 22-04-2016 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.692 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 4.6E-42 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Gene3D G3DSA:3.40.50.720 306 553 2.9E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Gene3D G3DSA:3.40.50.170 1 200 1.3E-51 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 SUPERFAMILY SSF50486 205 304 3.14E-23 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 PANTHER PTHR10366 317 659 2.2E-189 T 22-04-2016 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Gene3D G3DSA:3.10.25.10 204 305 4.4E-21 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 SUPERFAMILY SSF51735 317 651 2.84E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12690 c1d1ced2632a2df3d06ad922c3517c73 667 Pfam PF00551 Formyl transferase 25 173 4.0E-24 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS09600 80a521f11cf0ca1599b7fff11f0b98b3 171 PANTHER PTHR35861:SF2 1 170 2.9E-63 T 22-04-2016 YPTB_RS09600 80a521f11cf0ca1599b7fff11f0b98b3 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 170 1.5E-51 T 22-04-2016 IPR006498 Tail tube protein YPTB_RS09600 80a521f11cf0ca1599b7fff11f0b98b3 171 PANTHER PTHR35861 1 170 2.9E-63 T 22-04-2016 YPTB_RS09600 80a521f11cf0ca1599b7fff11f0b98b3 171 Pfam PF04985 Phage tail tube protein FII 4 170 6.4E-66 T 22-04-2016 IPR006498 Tail tube protein YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.302 T 22-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 PANTHER PTHR11993:SF28 146 593 0.0 T 22-04-2016 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 SUPERFAMILY SSF143243 24 228 1.57E-60 T 22-04-2016 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 1.4E-105 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 41.874 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 1.0E-26 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 25.19 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 Gene3D G3DSA:1.10.645.10 215 577 5.3E-47 T 22-04-2016 IPR029014 NiFe hydrogenase-like YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 2.3E-45 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 9.7E-176 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 PANTHER PTHR11993 146 593 0.0 T 22-04-2016 YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 SUPERFAMILY SSF56762 224 598 2.49E-121 T 22-04-2016 IPR029014 NiFe hydrogenase-like YPTB_RS14025 c3532d062db63b5e948232b458a28569 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 177 1.2E-41 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF55021 665 741 1.49E-13 T 22-04-2016 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.10.20.30 405 466 5.2E-26 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 PANTHER PTHR21262:SF5 55 743 0.0 T 22-04-2016 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF13291 ACT domain 664 740 1.5E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.6E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 SMART SM00954 251 361 3.5E-66 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.30.460.10 193 341 3.1E-51 T 22-04-2016 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF02824 TGS domain 405 464 1.2E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF109604 25 207 7.22E-46 T 22-04-2016 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 PANTHER PTHR21262 55 743 0.0 T 22-04-2016 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.30.70.260 664 739 1.0E-26 T 22-04-2016 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF81301 196 409 2.62E-64 T 22-04-2016 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF13328 HD domain 46 191 2.5E-41 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF81271 398 464 2.62E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPTB_RS04180 937f9571f7b751e668add8b6ea7f9dab 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 2.5E-187 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435:SF1 306 428 2.2E-104 T 22-04-2016 YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435:SF1 1 117 2.2E-104 T 22-04-2016 YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 SUPERFAMILY SSF117143 73 389 1.96E-77 T 22-04-2016 YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 Pfam PF00460 Flagella basal body rod protein 4 33 3.9E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435 306 428 2.2E-104 T 22-04-2016 YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435 1 117 2.2E-104 T 22-04-2016 YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 410 1.3E-97 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 Pfam PF07559 Flagellar basal body protein FlaE 174 309 4.4E-18 T 22-04-2016 IPR011491 Flagellar hook protein FlgE YPTB_RS09225 757f3b695096d6a4565490e30b65c023 428 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 350 427 1.0E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS18205 b8068d319efe491e1f634637c996f4a7 195 SUPERFAMILY SSF46894 24 99 4.25E-6 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS18205 b8068d319efe491e1f634637c996f4a7 195 Gene3D G3DSA:1.10.10.10 16 102 3.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PANTHER PTHR32063:SF21 9 1052 0.0 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.2090.10 720 804 8.3E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 34.895 T 22-04-2016 IPR022831 Multidrug resistance protein MdtB YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.2090.10 192 275 2.3E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.70.1430 49 150 1.6E-29 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82714 192 275 3.27E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82693 146 191 1.1E-19 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82866 299 498 3.14E-46 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82693 277 333 1.1E-19 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82693 49 142 4.71E-23 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 PANTHER PTHR32063 9 1052 0.0 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82693 565 662 1.92E-16 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.70.1430 568 656 2.1E-11 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:1.20.1640.10 294 508 3.6E-55 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82866 799 1025 9.55E-47 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:1.10.3850.10 807 1024 1.1E-56 T 22-04-2016 YPTB_RS15230 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82714 719 802 6.54E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 212 1.0E-12 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 PANTHER PTHR10909:SF305 19 353 9.9E-41 T 22-04-2016 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 Gene3D G3DSA:2.40.110.10 123 213 4.7E-16 T 22-04-2016 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 225 357 5.0E-19 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 99 1.8E-5 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 SUPERFAMILY SSF47203 232 360 2.69E-23 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 Gene3D G3DSA:1.20.140.10 214 355 6.5E-19 T 22-04-2016 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 PANTHER PTHR10909 19 353 9.9E-41 T 22-04-2016 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 SUPERFAMILY SSF56645 18 220 2.62E-33 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YPTB_RS03160 2a70d15177d295d4cba6616c750627a3 392 Gene3D G3DSA:1.10.540.10 18 119 1.9E-7 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 PANTHER PTHR30290 1 545 1.0E-216 T 22-04-2016 YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 Gene3D G3DSA:3.10.105.10 312 513 2.1E-60 T 22-04-2016 YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 Gene3D G3DSA:3.40.190.10 160 311 4.1E-57 T 22-04-2016 YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 PANTHER PTHR30290:SF10 1 545 1.0E-216 T 22-04-2016 YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 PIRSF PIRSF002741 1 545 5.6E-114 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 1.1E-86 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS11525 28ffda3de7bf2647417a48c451db5a6c 545 SUPERFAMILY SSF53850 38 527 1.03E-145 T 22-04-2016 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.1160.10 115 300 2.2E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.1160.10 13 60 2.2E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF53633 13 300 6.04E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 2.6E-21 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 PIRSF PIRSF000727 13 811 9.0E-291 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 Pfam PF00742 Homoserine dehydrogenase 609 804 1.6E-43 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF51735 458 631 9.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 Pfam PF00696 Amino acid kinase family 13 285 1.2E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.30.360.10 630 787 1.9E-52 T 22-04-2016 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.50.720 458 629 2.0E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF55347 609 792 2.62E-47 T 22-04-2016 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 PANTHER PTHR21499 387 811 2.8E-251 T 22-04-2016 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 PANTHER PTHR21499:SF29 387 811 2.8E-251 T 22-04-2016 YPTB_RS00640 f544590c926fa0f10f68e391065b814d 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 6.8E-63 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS15345 200b2ed97dce5211bf9406e5ed1d474d 74 SUPERFAMILY SSF161187 2 70 2.88E-27 T 22-04-2016 IPR029037 YfgJ-like YPTB_RS15345 200b2ed97dce5211bf9406e5ed1d474d 74 Pfam PF07191 zinc-ribbons 4 68 8.8E-29 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 YPTB_RS15345 200b2ed97dce5211bf9406e5ed1d474d 74 Gene3D G3DSA:2.10.290.10 2 70 3.5E-31 T 22-04-2016 IPR029037 YfgJ-like YPTB_RS15345 200b2ed97dce5211bf9406e5ed1d474d 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 4.0E-32 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 SUPERFAMILY SSF53335 258 373 3.98E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 SUPERFAMILY SSF53335 396 701 2.15E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 PANTHER PTHR18895:SF62 401 679 6.9E-134 T 22-04-2016 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 PANTHER PTHR18895 401 679 6.9E-134 T 22-04-2016 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 SUPERFAMILY SSF53335 146 217 3.98E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 Gene3D G3DSA:3.40.50.150 432 704 4.9E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 Pfam PF02926 THUMP domain 23 152 2.9E-15 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.232 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 SMART SM00981 56 154 1.3E-18 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 Gene3D G3DSA:3.40.50.150 255 349 4.1E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 Gene3D G3DSA:3.40.50.150 150 214 4.1E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 PIRSF PIRSF037618 1 703 1.4E-293 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.7E-62 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS07955 d9721131a9cd6c7fb7d08e1b09472542 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 453 664 4.7E-19 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YPTB_RS14980 240411d9b22267edefdc750ec4cbb0ba 92 PIRSF PIRSF037266 1 92 1.3E-41 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 YPTB_RS14980 240411d9b22267edefdc750ec4cbb0ba 92 Pfam PF09904 Winged helix-turn helix 3 90 8.7E-39 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 Gene3D G3DSA:3.10.290.10 1 64 6.1E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 PANTHER PTHR21600 1 230 1.9E-79 T 22-04-2016 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 Pfam PF01479 S4 domain 1 46 5.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.3E-57 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 SMART SM00363 1 69 3.0E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 SUPERFAMILY SSF55174 1 55 2.21E-11 T 22-04-2016 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 PANTHER PTHR21600:SF19 1 230 1.9E-79 T 22-04-2016 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 1.0E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS07210 51345df1f9cf2b8b57cc011aef59ea04 235 SUPERFAMILY SSF55120 61 227 1.46E-47 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS20850 58caa5f414df1cdfff0210e65aabd45a 317 SUPERFAMILY SSF53807 30 296 2.28E-65 T 22-04-2016 YPTB_RS20850 58caa5f414df1cdfff0210e65aabd45a 317 Pfam PF01497 Periplasmic binding protein 52 287 7.6E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS20850 58caa5f414df1cdfff0210e65aabd45a 317 Gene3D G3DSA:3.40.50.1980 32 159 1.9E-29 T 22-04-2016 YPTB_RS20850 58caa5f414df1cdfff0210e65aabd45a 317 PANTHER PTHR30532 1 317 7.9E-151 T 22-04-2016 YPTB_RS20850 58caa5f414df1cdfff0210e65aabd45a 317 Gene3D G3DSA:3.40.50.1980 160 310 1.1E-33 T 22-04-2016 YPTB_RS20850 58caa5f414df1cdfff0210e65aabd45a 317 PANTHER PTHR30532:SF4 1 317 7.9E-151 T 22-04-2016 YPTB_RS04805 24b4a0213665d8efe619ad244b5f155c 465 SUPERFAMILY SSF75304 5 454 1.44E-126 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPTB_RS04805 24b4a0213665d8efe619ad244b5f155c 465 PANTHER PTHR11895:SF74 6 462 0.0 T 22-04-2016 YPTB_RS04805 24b4a0213665d8efe619ad244b5f155c 465 Gene3D G3DSA:3.90.1300.10 5 455 1.5E-129 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPTB_RS04805 24b4a0213665d8efe619ad244b5f155c 465 Pfam PF01425 Amidase 28 445 1.1E-95 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPTB_RS04805 24b4a0213665d8efe619ad244b5f155c 465 PANTHER PTHR11895 6 462 0.0 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPTB_RS04805 24b4a0213665d8efe619ad244b5f155c 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 9 459 8.9E-237 T 22-04-2016 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169|UniPathway: UPA00008 YPTB_RS18900 8ffcc3df053453b491999e4ef3d14c9e 234 Gene3D G3DSA:2.60.120.10 4 232 6.8E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS18900 8ffcc3df053453b491999e4ef3d14c9e 234 PANTHER PTHR13903 1 234 1.9E-174 T 22-04-2016 IPR012093 Pirin YPTB_RS18900 8ffcc3df053453b491999e4ef3d14c9e 234 SUPERFAMILY SSF51182 1 232 2.67E-46 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS18900 8ffcc3df053453b491999e4ef3d14c9e 234 Pfam PF02678 Pirin 5 119 1.0E-21 T 22-04-2016 IPR003829 Pirin, N-terminal domain YPTB_RS18900 8ffcc3df053453b491999e4ef3d14c9e 234 PIRSF PIRSF006232 1 231 1.5E-32 T 22-04-2016 IPR012093 Pirin YPTB_RS18900 8ffcc3df053453b491999e4ef3d14c9e 234 PANTHER PTHR13903:SF14 1 234 1.9E-174 T 22-04-2016 YPTB_RS19310 580282019844b19ef38fada7f863390a 154 Pfam PF00364 Biotin-requiring enzyme 82 153 6.7E-25 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPTB_RS19310 580282019844b19ef38fada7f863390a 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.4E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPTB_RS19310 580282019844b19ef38fada7f863390a 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.4E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPTB_RS19310 580282019844b19ef38fada7f863390a 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.4E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPTB_RS19310 580282019844b19ef38fada7f863390a 154 SUPERFAMILY SSF51230 79 154 8.77E-27 T 22-04-2016 IPR011053 Single hybrid motif YPTB_RS19310 580282019844b19ef38fada7f863390a 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 22-04-2016 IPR001882 Biotin-binding site YPTB_RS19310 580282019844b19ef38fada7f863390a 154 Gene3D G3DSA:2.40.50.100 79 154 9.4E-33 T 22-04-2016 YPTB_RS19310 580282019844b19ef38fada7f863390a 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 4.4E-65 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPTB_RS19310 580282019844b19ef38fada7f863390a 154 PANTHER PTHR23151 1 154 2.1E-54 T 22-04-2016 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 281 370 3.0E-19 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 Pfam PF13186 Iron-sulfur cluster-binding domain 282 342 9.0E-8 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 12 389 1.3E-161 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 Gene3D G3DSA:3.20.20.70 19 356 5.7E-40 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 173 404 1.0E-14 T 22-04-2016 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 SUPERFAMILY SSF102114 18 351 1.23E-37 T 22-04-2016 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 PANTHER PTHR11228 13 219 1.7E-251 T 22-04-2016 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 PANTHER PTHR11228 238 380 1.7E-251 T 22-04-2016 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 Pfam PF04055 Radical SAM superfamily 19 188 2.1E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 PANTHER PTHR11228:SF24 13 219 1.7E-251 T 22-04-2016 YPTB_RS16695 8407d75e58871b11b5cfd7bfd8dcd687 408 PANTHER PTHR11228:SF24 238 380 1.7E-251 T 22-04-2016 YPTB_RS19480 37a993f1f5a2f61cfdb9d5fa0839e028 271 Pfam PF00005 ABC transporter 28 161 1.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS19480 37a993f1f5a2f61cfdb9d5fa0839e028 271 SMART SM00382 37 211 2.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19480 37a993f1f5a2f61cfdb9d5fa0839e028 271 PANTHER PTHR24220 14 247 2.1E-152 T 22-04-2016 YPTB_RS19480 37a993f1f5a2f61cfdb9d5fa0839e028 271 PANTHER PTHR24220:SF365 14 247 2.1E-152 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 YPTB_RS19480 37a993f1f5a2f61cfdb9d5fa0839e028 271 Gene3D G3DSA:3.40.50.300 11 212 7.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19480 37a993f1f5a2f61cfdb9d5fa0839e028 271 SUPERFAMILY SSF52540 13 213 3.29E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19480 37a993f1f5a2f61cfdb9d5fa0839e028 271 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS03655 9a56f398f471b0cd8996afbeb8e4b803 163 PANTHER PTHR37625:SF2 1 163 1.0E-79 T 22-04-2016 YPTB_RS03655 9a56f398f471b0cd8996afbeb8e4b803 163 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 152 2.6E-19 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS03655 9a56f398f471b0cd8996afbeb8e4b803 163 PANTHER PTHR37625 1 163 1.0E-79 T 22-04-2016 YPTB_RS03655 9a56f398f471b0cd8996afbeb8e4b803 163 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 133 4.7E-11 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF51621 249 549 1.94E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 9.1E-126 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 4.0E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.52E-31 T 22-04-2016 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.52E-31 T 22-04-2016 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.52E-31 T 22-04-2016 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.52E-31 T 22-04-2016 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:3.20.20.60 256 571 1.8E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PANTHER PTHR22931 66 550 1.1E-220 T 22-04-2016 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:3.50.30.10 133 255 7.8E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF47831 23 143 1.96E-34 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF52009 125 246 8.24E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 1.5E-260 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.2E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:1.10.274.10 23 132 2.6E-39 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS14730 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PIRSF PIRSF000732 1 574 6.1E-219 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 239 1.4E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 341 454 3.4E-16 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.270.10 1060 1242 7.8E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.270.10 793 820 7.8E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.32 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.30.150.10 592 656 4.6E-31 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.2E-57 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.100 716 792 2.2E-30 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.1E-160 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 SUPERFAMILY SSF64484 11 226 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 SUPERFAMILY SSF64484 1039 1340 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 20 151 5.4E-148 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 659 713 5.4E-148 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 445 591 5.4E-148 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1110.10 346 444 1.1E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1110.10 153 230 1.1E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 1182 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.5E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.150 828 937 2.5E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.5E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.3E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01680 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 50 887 3.8E-301 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SUPERFAMILY SSF81593 211 330 1.57E-10 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 PANTHER PTHR13734 114 706 1.2E-164 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Gene3D G3DSA:3.30.460.10 90 183 3.5E-6 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Pfam PF01842 ACT domain 818 878 5.5E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Pfam PF01909 Nucleotidyltransferase domain 87 124 1.2E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Pfam PF01966 HD domain 470 603 1.7E-13 T 22-04-2016 IPR006674 HD domain YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SUPERFAMILY SSF55021 707 766 5.34E-9 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SUPERFAMILY SSF109604 459 560 9.42E-14 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SUPERFAMILY SSF81301 9 191 1.01E-23 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Gene3D G3DSA:3.30.70.260 815 886 4.0E-10 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SMART SM00471 466 613 3.6E-11 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Gene3D G3DSA:1.10.3210.10 440 631 2.9E-26 T 22-04-2016 IPR006674 HD domain YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SUPERFAMILY SSF81891 431 471 3.04E-9 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SUPERFAMILY SSF81891 506 650 3.04E-9 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 PANTHER PTHR13734:SF45 114 706 1.2E-164 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 PIRSF PIRSF006288 29 893 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 SUPERFAMILY SSF55021 816 887 2.71E-10 T 22-04-2016 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 893 344.206 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YPTB_RS16265 663a17a352eabbd7df20a4f74e541d5f 893 Pfam PF08335 GlnD PII-uridylyltransferase 194 333 5.3E-37 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YPTB_RS08390 5fc8588eddcfe547dde6fd80005ee599 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 2.4E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS08390 5fc8588eddcfe547dde6fd80005ee599 336 PANTHER PTHR32196 1 336 6.0E-236 T 22-04-2016 YPTB_RS08390 5fc8588eddcfe547dde6fd80005ee599 336 PANTHER PTHR32196:SF18 1 336 6.0E-236 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 SUPERFAMILY SSF82866 399 595 1.28E-41 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 Pfam PF07549 SecD/SecF GG Motif 109 129 4.1E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 PANTHER PTHR30081:SF1 1 162 4.6E-231 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 PANTHER PTHR30081:SF1 302 602 4.6E-231 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 PANTHER PTHR30081:SF1 213 271 4.6E-231 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 Pfam PF13721 SecD export protein N-terminal TM region 1 92 2.0E-28 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 PANTHER PTHR30081 1 162 4.6E-231 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 PANTHER PTHR30081 302 602 4.6E-231 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 PANTHER PTHR30081 213 271 4.6E-231 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 590 3.1E-151 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 Gene3D G3DSA:1.20.1640.10 429 597 5.5E-24 T 22-04-2016 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 334 583 5.4E-84 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 603 46.754 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YPTB_RS05165 a6905c1124140fc642ebad090715b938 604 Pfam PF02355 Protein export membrane protein 422 590 6.2E-16 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 9.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF00672 HAMP domain 185 250 4.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 SUPERFAMILY SSF103190 56 170 1.1E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 Gene3D G3DSA:1.10.287.130 258 315 4.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF14827 Double sensory domain of two-component sensor kinase 55 168 2.5E-6 T 22-04-2016 IPR029150 Double Cache domain 3 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 SUPERFAMILY SSF47384 254 319 1.22E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 PANTHER PTHR24423 56 133 1.2E-65 T 22-04-2016 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 PANTHER PTHR24423 5 13 1.2E-65 T 22-04-2016 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 PANTHER PTHR24423 198 472 1.2E-65 T 22-04-2016 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 SMART SM00387 364 472 5.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 472 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 Gene3D G3DSA:3.30.450.20 91 168 4.4E-4 T 22-04-2016 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 Gene3D G3DSA:3.30.565.10 320 472 7.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 SMART SM00388 255 320 2.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS17175 f98e4a7d175d786ea793f409e6d1220f 472 SUPERFAMILY SSF55874 311 472 5.24E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 SUPERFAMILY SSF51344 4 87 6.93E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 SUPERFAMILY SSF46604 90 138 1.83E-14 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 1.0E-38 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.0 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 2.3E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 Gene3D G3DSA:2.60.15.10 4 92 1.8E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.7E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 Gene3D G3DSA:1.20.5.440 93 135 6.8E-24 T 22-04-2016 YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 PANTHER PTHR13822 1 140 4.9E-47 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21405 d3e43d909f353a6ae466c95f4e0b3af9 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.1E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS14075 5d95865658b256d7c245198a2f5a412e 164 SUPERFAMILY SSF116960 1 164 1.23E-69 T 22-04-2016 YPTB_RS14075 5d95865658b256d7c245198a2f5a412e 164 PIRSF PIRSF006272 1 164 5.9E-75 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPTB_RS14075 5d95865658b256d7c245198a2f5a412e 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 38.102 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPTB_RS14075 5d95865658b256d7c245198a2f5a412e 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-95 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPTB_RS14075 5d95865658b256d7c245198a2f5a412e 164 Gene3D G3DSA:1.10.287.680 1 52 5.8E-31 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain YPTB_RS14075 5d95865658b256d7c245198a2f5a412e 164 Pfam PF03887 YfbU domain 1 164 1.3E-69 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPTB_RS14075 5d95865658b256d7c245198a2f5a412e 164 Gene3D G3DSA:1.10.3190.10 53 164 1.5E-50 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 SMART SM00490 262 343 9.9E-27 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.417 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 SUPERFAMILY SSF52540 76 359 1.17E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 Gene3D G3DSA:3.40.50.300 215 376 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 PANTHER PTHR24031:SF334 3 434 2.5E-234 T 22-04-2016 YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 Pfam PF00270 DEAD/DEAH box helicase 28 196 7.0E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 Gene3D G3DSA:3.40.50.300 3 214 1.0E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 PANTHER PTHR24031 3 434 2.5E-234 T 22-04-2016 YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 SMART SM00487 23 225 5.6E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS15670 818a2ea06329b5784b6f5ce21c74943c 441 Pfam PF00271 Helicase conserved C-terminal domain 235 343 8.8E-26 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS19630 240508112c082ac3f4d6155e7409b9a9 250 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 29 238 1.3E-61 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS19630 240508112c082ac3f4d6155e7409b9a9 250 PANTHER PTHR38033 1 250 2.3E-104 T 22-04-2016 YPTB_RS19630 240508112c082ac3f4d6155e7409b9a9 250 Pfam PF09850 Type VI secretion system protein DotU 31 233 1.3E-57 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS19630 240508112c082ac3f4d6155e7409b9a9 250 PANTHER PTHR38033:SF1 1 250 2.3E-104 T 22-04-2016 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.333 T 22-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 Gene3D G3DSA:1.10.3860.10 11 404 1.3E-83 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 SUPERFAMILY SSF118215 17 400 1.96E-95 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 8.7E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 8.7E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 8.7E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 8.7E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 8.7E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 8.7E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 Pfam PF00375 Sodium:dicarboxylate symporter family 17 398 3.1E-64 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PANTHER PTHR11958:SF68 8 410 1.8E-269 T 22-04-2016 YPTB_RS18805 b3c67e6f387eb0cd6f132f908cf985f4 418 PANTHER PTHR11958 8 410 1.8E-269 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 PANTHER PTHR38768 1 233 9.0E-82 T 22-04-2016 YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 SUPERFAMILY SSF46785 88 169 1.51E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 Gene3D G3DSA:1.10.10.10 93 169 7.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 PANTHER PTHR38768:SF1 1 233 9.0E-82 T 22-04-2016 YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 Gene3D G3DSA:1.10.10.10 3 85 9.9E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 SUPERFAMILY SSF46785 2 82 1.02E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 229 33.616 T 22-04-2016 IPR007432 Protein of unknown function DUF480 YPTB_RS11105 98857486a05f0b65872476beaaaea496 233 Pfam PF04337 Protein of unknown function, DUF480 5 156 7.9E-63 T 22-04-2016 IPR007432 Protein of unknown function DUF480 YPTB_RS16155 6225b3090af3c6c842f91ce5c954307d 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 7.9E-29 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination YPTB_RS16155 6225b3090af3c6c842f91ce5c954307d 86 SUPERFAMILY SSF101744 1 84 1.67E-30 T 22-04-2016 IPR023534 Rof/RNase P-like YPTB_RS07680 21eb55a92de7ba15aef68682db1bdf27 370 SUPERFAMILY SSF111369 52 298 1.31E-29 T 22-04-2016 YPTB_RS07680 21eb55a92de7ba15aef68682db1bdf27 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 1.9E-22 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS07680 21eb55a92de7ba15aef68682db1bdf27 370 Gene3D G3DSA:2.40.50.100 61 94 1.9E-15 T 22-04-2016 YPTB_RS07680 21eb55a92de7ba15aef68682db1bdf27 370 Gene3D G3DSA:2.40.50.100 183 214 1.9E-15 T 22-04-2016 YPTB_RS07680 21eb55a92de7ba15aef68682db1bdf27 370 PANTHER PTHR30572:SF10 5 364 3.4E-253 T 22-04-2016 IPR030190 Macrolide export protein MacA GO:0006810|GO:0019898|GO:0022891 YPTB_RS07680 21eb55a92de7ba15aef68682db1bdf27 370 PANTHER PTHR30572 5 364 3.4E-253 T 22-04-2016 YPTB_RS07680 21eb55a92de7ba15aef68682db1bdf27 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 363 9.1E-60 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS00570 3ba4822792f1ee183c4e8db8bda7b287 194 Pfam PF14016 Protein of unknown function (DUF4232) 50 172 9.9E-13 T 22-04-2016 IPR025326 Protein of unknown function DUF4232 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 PANTHER PTHR22931 1 716 0.0 T 22-04-2016 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:3.50.30.10 301 415 1.2E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF47831 202 309 8.24E-26 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 730 1.5E-130 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF51621 420 715 4.19E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 PANTHER PTHR22931:SF23 1 716 0.0 T 22-04-2016 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 419 707 6.0E-103 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF01590 GAF domain 18 151 2.3E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:3.20.20.60 420 736 6.2E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 9.2E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:1.10.274.10 198 300 2.2E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:3.30.450.40 2 159 1.7E-46 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 6.1E-16 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.6E-25 T 22-04-2016 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 7.6E-25 T 22-04-2016 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 7.6E-25 T 22-04-2016 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 7.6E-25 T 22-04-2016 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF55781 4 159 1.74E-30 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 SMART SM00065 17 164 3.0E-26 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPTB_RS16435 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF52009 293 413 3.66E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 PANTHER PTHR11748 249 588 2.4E-192 T 22-04-2016 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 PANTHER PTHR11748 17 196 2.4E-192 T 22-04-2016 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 SUPERFAMILY SSF46548 655 691 2.35E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 SUPERFAMILY SSF46548 516 623 2.35E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.2E-61 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 SUPERFAMILY SSF55103 258 542 1.96E-53 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 PANTHER PTHR11748:SF35 249 588 2.4E-192 T 22-04-2016 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 PANTHER PTHR11748:SF35 17 196 2.4E-192 T 22-04-2016 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 Gene3D G3DSA:3.30.43.10 2 109 1.8E-28 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 Gene3D G3DSA:3.30.465.10 110 282 2.5E-42 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 674 685 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 Pfam PF01565 FAD binding domain 52 192 2.4E-35 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 Gene3D G3DSA:1.10.1060.10 657 705 2.2E-15 T 22-04-2016 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 Gene3D G3DSA:1.10.1060.10 517 620 2.2E-15 T 22-04-2016 YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 Pfam PF13183 4Fe-4S dicluster domain 577 688 3.3E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS12630 8bcc66a2f1d09f82822bfa4d9d410fb7 1018 SUPERFAMILY SSF56176 18 282 8.36E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 Pfam PF00589 Phage integrase family 117 284 1.1E-51 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 5.9E-22 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 300 1.3E-107 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 SUPERFAMILY SSF56349 13 288 4.41E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 298 36.487 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 PANTHER PTHR30349 3 300 8.8E-171 T 22-04-2016 YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 PANTHER PTHR30349:SF17 3 300 8.8E-171 T 22-04-2016 YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 Gene3D G3DSA:1.10.150.130 10 105 5.6E-24 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPTB_RS01165 ef9a317c49edb090d79c71f193c40563 303 Gene3D G3DSA:1.10.443.10 119 291 8.2E-53 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 SUPERFAMILY SSF53649 108 442 1.89E-95 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 SUPERFAMILY SSF53649 56 75 1.89E-95 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 SUPERFAMILY SSF53649 478 532 1.89E-95 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 Pfam PF00884 Sulfatase 57 406 1.9E-93 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 Gene3D G3DSA:3.30.1120.10 454 538 1.4E-8 T 22-04-2016 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 ProSitePatterns PS00149 Sulfatases signature 2. 174 184 - T 22-04-2016 IPR024607 Sulfatase, conserved site YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 ProSitePatterns PS00523 Sulfatases signature 1. 129 141 - T 22-04-2016 IPR024607 Sulfatase, conserved site YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 PANTHER PTHR10342:SF199 98 185 5.4E-141 T 22-04-2016 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 PANTHER PTHR10342:SF199 213 556 5.4E-141 T 22-04-2016 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 PANTHER PTHR10342:SF199 52 70 5.4E-141 T 22-04-2016 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 PANTHER PTHR10342 98 185 5.4E-141 T 22-04-2016 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 PANTHER PTHR10342 213 556 5.4E-141 T 22-04-2016 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 PANTHER PTHR10342 52 70 5.4E-141 T 22-04-2016 YPTB_RS15005 960e667ab9eb1858bb8b917b92888aeb 556 Gene3D G3DSA:3.40.720.10 56 435 1.2E-94 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 SUPERFAMILY SSF52540 7 233 1.15E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 PANTHER PTHR24220:SF538 9 382 8.9E-254 T 22-04-2016 YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 Gene3D G3DSA:3.40.50.300 6 236 2.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 Gene3D G3DSA:3.40.50.300 271 492 3.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 Pfam PF00005 ABC transporter 23 174 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 Pfam PF00005 ABC transporter 274 428 2.5E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 PANTHER PTHR24220 9 382 8.9E-254 T 22-04-2016 YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 SMART SM00382 32 222 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 SMART SM00382 282 477 0.0012 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19445 9d15576d26a25d81d88a1850126fc3d6 498 SUPERFAMILY SSF52540 272 488 6.86E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 PANTHER PTHR18964:SF140 5 290 5.4E-175 T 22-04-2016 YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 2 290 49.236 T 22-04-2016 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138|UniPathway: UPA00629 YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 Gene3D G3DSA:3.30.420.40 134 256 2.7E-42 T 22-04-2016 YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 Pfam PF00480 ROK family 5 288 3.9E-70 T 22-04-2016 IPR000600 ROK family YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 ProSitePatterns PS01125 ROK family signature. 129 156 - T 22-04-2016 IPR000600 ROK family YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 PANTHER PTHR18964 5 290 5.4E-175 T 22-04-2016 YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 SUPERFAMILY SSF53067 3 288 6.72E-53 T 22-04-2016 YPTB_RS14850 a7e9bbed5997e73238cbce1ac29bcfcb 290 Gene3D G3DSA:3.30.420.40 3 133 5.1E-28 T 22-04-2016 YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 Pfam PF13633 Prokaryotic N-terminal methylation site 7 31 3.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 Gene3D G3DSA:3.10.610.10 39 148 4.8E-11 T 22-04-2016 YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 PANTHER PTHR39583:SF1 1 197 4.4E-58 T 22-04-2016 YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 196 3.2E-31 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 Pfam PF11612 Type II secretion system (T2SS), protein J 59 193 4.8E-23 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 PANTHER PTHR39583 1 197 4.4E-58 T 22-04-2016 YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 7.7E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 SUPERFAMILY SSF54523 47 197 1.41E-33 T 22-04-2016 YPTB_RS16565 7549869ef1cdb5972cab15e9b330270c 198 Gene3D G3DSA:2.10.70.20 151 196 2.4E-12 T 22-04-2016 YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 Gene3D G3DSA:3.90.180.10 3 147 5.2E-44 T 22-04-2016 IPR011032 GroES-like YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 SMART SM00829 11 325 4.1E-29 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 SUPERFAMILY SSF51735 113 274 1.41E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 PANTHER PTHR11695 16 327 4.9E-134 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 2.5E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 Gene3D G3DSA:3.40.50.720 148 256 4.8E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 PANTHER PTHR11695:SF605 16 327 4.9E-134 T 22-04-2016 YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 1.3E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPTB_RS02170 86b998a1f134a27d909cfa458645badb 327 SUPERFAMILY SSF50129 2 145 7.55E-36 T 22-04-2016 IPR011032 GroES-like YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.4E-157 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-149 T 22-04-2016 YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 PANTHER PTHR20919:SF0 2 309 1.2E-165 T 22-04-2016 YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.2E-131 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 PANTHER PTHR20919 2 309 1.2E-165 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 51.887 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 PIRSF PIRSF000450 1 308 1.5E-146 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 SUPERFAMILY SSF52317 17 297 3.82E-100 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS19775 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Gene3D G3DSA:3.40.50.880 34 301 6.9E-119 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.54.20 130 187 1.2E-20 T 22-04-2016 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.7E-50 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF02824 TGS domain 4 61 1.6E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.980.10 188 223 3.2E-40 T 22-04-2016 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.980.10 66 129 3.2E-40 T 22-04-2016 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 PANTHER PTHR11451 1 642 0.0 T 22-04-2016 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 4.0E-242 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF55186 63 241 7.19E-64 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF81271 3 61 1.85E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 SMART SM00863 170 219 2.6E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.10.20.30 1 64 7.5E-24 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF03129 Anticodon binding domain 541 628 4.3E-21 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 PANTHER PTHR11451:SF31 1 642 0.0 T 22-04-2016 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF55681 243 525 5.84E-96 T 22-04-2016 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.002 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.930.10 242 530 2.6E-121 T 22-04-2016 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF52954 529 636 1.15E-31 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.40.50.800 532 640 4.0E-36 T 22-04-2016 IPR004154 Anticodon-binding YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.9E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPTB_RS12755 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PANTHER PTHR24322:SF57 9 136 8.6E-45 T 22-04-2016 YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PANTHER PTHR24322:SF57 152 183 8.6E-45 T 22-04-2016 YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 SUPERFAMILY SSF51735 7 213 4.42E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 Pfam PF00106 short chain dehydrogenase 7 189 7.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 Gene3D G3DSA:3.40.50.720 7 213 8.4E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PANTHER PTHR24322 9 136 8.6E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS10885 6a4df4500305dd60dfb76475f8960440 226 PANTHER PTHR24322 152 183 8.6E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 PANTHER PTHR11699 628 1114 5.8E-183 T 22-04-2016 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 883 890 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF81935 89 262 1.1E-65 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:1.10.2060.10 143 261 4.7E-54 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF51730 263 618 2.31E-123 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:3.40.605.10 656 898 3.4E-68 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 PANTHER PTHR11699:SF18 628 1114 5.8E-183 T 22-04-2016 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Pfam PF01619 Proline dehydrogenase 271 570 5.0E-99 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:3.20.20.220 262 618 6.3E-122 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 PIRSF PIRSF000197 75 1323 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Pfam PF00171 Aldehyde dehydrogenase family 659 1107 1.1E-114 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 1.5E-45 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF47598 4 45 2.67E-10 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 911 922 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1114 3.4E-250 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:1.20.5.550 88 139 9.3E-26 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF53720 635 1113 1.96E-129 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS09470 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:3.40.309.10 899 1091 2.6E-47 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS19685 619c7a3b1c9b47fe54454afffc0a6e48 303 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 74 206 3.6E-53 T 22-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.419 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 SUPERFAMILY SSF51246 319 391 1.73E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 SUPERFAMILY SSF52440 3 112 2.45E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 2.9E-186 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 PANTHER PTHR11609 1 379 8.6E-225 T 22-04-2016 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 PANTHER PTHR11609:SF7 1 379 8.6E-225 T 22-04-2016 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 Pfam PF02222 ATP-grasp domain 123 295 3.0E-55 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 Gene3D G3DSA:3.30.470.20 199 388 1.4E-65 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 SUPERFAMILY SSF56059 113 314 8.31E-55 T 22-04-2016 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 Gene3D G3DSA:3.30.1490.20 124 198 1.7E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS09095 20c082fb22938b3d6c4b2d58293bd5b3 393 Gene3D G3DSA:3.40.50.20 5 120 1.7E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:4.10.960.10 77 157 4.7E-35 T 22-04-2016 YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.4E-92 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 Pfam PF00297 Ribosomal protein L3 94 182 1.2E-12 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 SUPERFAMILY SSF50447 1 208 2.38E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.005 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 PANTHER PTHR11229 1 208 2.8E-124 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:2.40.30.10 158 207 8.1E-8 T 22-04-2016 YPTB_RS20015 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:2.40.30.10 3 32 8.1E-8 T 22-04-2016 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 PANTHER PTHR10088 1 295 1.8E-211 T 22-04-2016 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 3.0E-129 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 PANTHER PTHR10088:SF5 1 295 1.8E-211 T 22-04-2016 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 SUPERFAMILY SSF53697 4 249 5.12E-75 T 22-04-2016 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Gene3D G3DSA:3.40.50.10490 4 245 5.9E-94 T 22-04-2016 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.497 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Pfam PF01380 SIS domain 128 208 2.7E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 SUPERFAMILY SSF46934 239 277 5.19E-5 T 22-04-2016 IPR009060 UBA-like GO:0005515 YPTB_RS15585 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Gene3D G3DSA:1.10.8.10 246 271 6.3E-4 T 22-04-2016 YPTB_RS00730 2d2b73e35bb5173731c4db42d347d5a1 211 PANTHER PTHR30055 1 206 1.9E-113 T 22-04-2016 YPTB_RS00730 2d2b73e35bb5173731c4db42d347d5a1 211 Gene3D G3DSA:1.10.357.10 2 193 1.9E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS00730 2d2b73e35bb5173731c4db42d347d5a1 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 2.2E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS00730 2d2b73e35bb5173731c4db42d347d5a1 211 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 210 54.429 T 22-04-2016 IPR023764 Transcriptional repressor HTH, FabR YPTB_RS00730 2d2b73e35bb5173731c4db42d347d5a1 211 SUPERFAMILY SSF46689 3 77 2.32E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS00730 2d2b73e35bb5173731c4db42d347d5a1 211 PANTHER PTHR30055:SF39 1 206 1.9E-113 T 22-04-2016 YPTB_RS10550 361aa33f5a7f20b293dec83b6f1327ea 176 Pfam PF00419 Fimbrial protein 26 175 1.8E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS10550 361aa33f5a7f20b293dec83b6f1327ea 176 SUPERFAMILY SSF49401 25 175 5.97E-26 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS10550 361aa33f5a7f20b293dec83b6f1327ea 176 PANTHER PTHR33420:SF10 1 176 3.2E-57 T 22-04-2016 YPTB_RS10550 361aa33f5a7f20b293dec83b6f1327ea 176 Gene3D G3DSA:2.60.40.1090 25 176 8.2E-25 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS10550 361aa33f5a7f20b293dec83b6f1327ea 176 PANTHER PTHR33420 1 176 3.2E-57 T 22-04-2016 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 2.3E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.0E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 PIRSF PIRSF001619 1 319 8.0E-139 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 Pfam PF04055 Radical SAM superfamily 50 202 5.9E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 SUPERFAMILY SSF102114 5 313 2.62E-95 T 22-04-2016 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 SMART SM00729 43 255 1.7E-41 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 Gene3D G3DSA:3.20.20.70 5 314 9.2E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 PANTHER PTHR22976 7 345 3.2E-199 T 22-04-2016 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 PANTHER PTHR22976:SF1 7 345 3.2E-199 T 22-04-2016 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 SMART SM00876 220 312 1.5E-48 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS06555 556276d9b1ccec551de2f97ca40c005d 345 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.761 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 SUPERFAMILY SSF102114 21 211 1.14E-22 T 22-04-2016 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 Pfam PF04055 Radical SAM superfamily 22 176 4.7E-31 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 PANTHER PTHR30352:SF9 1 244 5.2E-155 T 22-04-2016 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 PANTHER PTHR30352 1 244 5.2E-155 T 22-04-2016 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 Gene3D G3DSA:3.80.30.10 67 244 7.7E-68 T 22-04-2016 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 4 236 2.1E-106 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 YPTB_RS07765 b0946fafda6e44c5c25ee666e72833c2 244 Pfam PF13353 4Fe-4S single cluster domain 14 123 8.0E-18 T 22-04-2016 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 SUPERFAMILY SSF51905 575 586 6.41E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 SUPERFAMILY SSF51905 618 672 6.41E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 SUPERFAMILY SSF51905 266 482 6.41E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 PANTHER PTHR13847:SF182 615 680 1.2E-189 T 22-04-2016 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 PANTHER PTHR13847:SF182 226 589 1.2E-189 T 22-04-2016 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Gene3D G3DSA:3.40.50.150 11 250 1.1E-102 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 674 7.5E-157 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 PANTHER PTHR13847 615 680 1.2E-189 T 22-04-2016 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Gene3D G3DSA:3.50.50.60 399 481 8.9E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Gene3D G3DSA:3.50.50.60 575 582 8.9E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Gene3D G3DSA:3.50.50.60 614 666 8.9E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Gene3D G3DSA:3.50.50.60 265 344 8.9E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 PANTHER PTHR13847 226 589 1.2E-189 T 22-04-2016 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Pfam PF01266 FAD dependent oxidoreductase 266 644 1.7E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 669 28.214 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 SUPERFAMILY SSF53335 138 242 4.32E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS14245 5e91a04d301feaa4a00696053379cefb 689 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 1.4E-49 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SUPERFAMILY SSF52058 63 308 2.48E-34 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 Gene3D G3DSA:1.20.1270.130 283 371 3.0E-11 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00369 215 237 18.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00369 149 172 1.4 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00369 128 148 190.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00369 173 198 32.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00369 104 126 170.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 Pfam PF12468 Type III secretion system leucine rich repeat protein 6 55 4.1E-13 T 22-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00364 173 192 2.2 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00364 126 145 13.0 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00364 214 233 6.4 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00364 83 102 16.0 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00364 149 168 69.0 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00364 103 122 26.0 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 SMART SM00364 193 212 0.0064 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 PANTHER PTHR24365 67 253 3.0E-23 T 22-04-2016 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 Pfam PF13855 Leucine rich repeat 105 162 8.4E-8 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 YPTB_RS14855 72ba25c540ab73f111b7e527a34f9ada 379 Gene3D G3DSA:3.80.10.10 63 254 2.9E-37 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPTB_RS04295 d3f3783745daf252971ea24e18cca44e 254 SUPERFAMILY SSF64167 2 249 5.62E-82 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPTB_RS04295 d3f3783745daf252971ea24e18cca44e 254 PANTHER PTHR30457 2 251 1.9E-101 T 22-04-2016 YPTB_RS04295 d3f3783745daf252971ea24e18cca44e 254 Gene3D G3DSA:3.40.1210.10 2 249 3.8E-85 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPTB_RS04295 d3f3783745daf252971ea24e18cca44e 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 39.745 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPTB_RS04295 d3f3783745daf252971ea24e18cca44e 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 1.3E-75 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPTB_RS04295 d3f3783745daf252971ea24e18cca44e 254 Pfam PF01975 Survival protein SurE 4 181 5.6E-56 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPTB_RS17650 2f136ad944000b27c0d1460133557b50 452 PANTHER PTHR10655:SF24 149 438 1.9E-91 T 22-04-2016 YPTB_RS17650 2f136ad944000b27c0d1460133557b50 452 Gene3D G3DSA:3.40.50.1820 158 399 2.9E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17650 2f136ad944000b27c0d1460133557b50 452 PANTHER PTHR10655 149 438 1.9E-91 T 22-04-2016 YPTB_RS17650 2f136ad944000b27c0d1460133557b50 452 SUPERFAMILY SSF53474 186 386 8.6E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17650 2f136ad944000b27c0d1460133557b50 452 Pfam PF10503 Esterase PHB depolymerase 274 335 3.8E-5 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 Gene3D G3DSA:3.40.50.300 6 232 6.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 Gene3D G3DSA:3.40.50.300 326 551 1.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 Pfam PF00005 ABC transporter 28 167 5.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 Pfam PF00005 ABC transporter 348 491 3.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 PANTHER PTHR24220:SF546 9 231 1.0E-231 T 22-04-2016 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 PANTHER PTHR24220:SF546 254 302 1.0E-231 T 22-04-2016 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 PANTHER PTHR24220:SF546 347 451 1.0E-231 T 22-04-2016 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 SMART SM00382 34 268 3.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 SMART SM00382 356 537 2.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 PANTHER PTHR24220 9 231 1.0E-231 T 22-04-2016 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 PANTHER PTHR24220 254 302 1.0E-231 T 22-04-2016 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 PANTHER PTHR24220 347 451 1.0E-231 T 22-04-2016 YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 SUPERFAMILY SSF52540 7 228 1.71E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06710 dcae1755ed9160ed693edfdbd9d2c2b4 580 SUPERFAMILY SSF52540 330 551 2.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15055 e0b70fbbe533d889cbf2d152e56dff6f 150 PANTHER PTHR38452:SF1 2 149 4.6E-74 T 22-04-2016 YPTB_RS15055 e0b70fbbe533d889cbf2d152e56dff6f 150 PANTHER PTHR38452 2 149 4.6E-74 T 22-04-2016 YPTB_RS15055 e0b70fbbe533d889cbf2d152e56dff6f 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 1.1E-47 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPTB_RS15055 e0b70fbbe533d889cbf2d152e56dff6f 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 132 1.0E-39 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPTB_RS15055 e0b70fbbe533d889cbf2d152e56dff6f 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.832 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 SUPERFAMILY SSF55120 77 321 2.67E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 Pfam PF01479 S4 domain 18 65 1.0E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 4.1E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 Gene3D G3DSA:3.10.290.10 18 69 5.3E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 PANTHER PTHR11079:SF73 6 323 1.0E-157 T 22-04-2016 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 SMART SM00363 18 83 1.5E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 SUPERFAMILY SSF55174 17 69 1.48E-11 T 22-04-2016 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 3.1E-107 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04690 c0955edf2da0b8fc74111682a0a21c77 325 PANTHER PTHR11079 6 323 1.0E-157 T 22-04-2016 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 PANTHER PTHR22993 1 268 1.1E-139 T 22-04-2016 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SUPERFAMILY SSF46946 130 222 2.75E-29 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.3E-30 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Gene3D G3DSA:3.20.190.10 2 129 2.8E-36 T 22-04-2016 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.284 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Gene3D G3DSA:1.10.8.50 130 269 1.1E-49 T 22-04-2016 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SMART SM01232 129 221 1.0E-47 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SMART SM00898 2 115 8.4E-54 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.6E-101 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SUPERFAMILY SSF57716 217 268 3.99E-17 T 22-04-2016 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SUPERFAMILY SSF81624 2 138 2.75E-43 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 PANTHER PTHR22993:SF15 1 268 1.1E-139 T 22-04-2016 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.4E-25 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YPTB_RS00345 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.3E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type YPTB_RS03805 c63204b4e7b1f7feba1a889b5702f39f 146 Pfam PF06610 L-alanine exporter 6 142 6.7E-72 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YPTB_RS03805 c63204b4e7b1f7feba1a889b5702f39f 146 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 145 36.208 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YPTB_RS03805 c63204b4e7b1f7feba1a889b5702f39f 146 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 9 142 4.0E-61 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YPTB_RS12840 76751c41333d00b09a57f93562ee22d5 555 Pfam PF06917 Periplasmic pectate lyase 14 539 5.0E-129 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPTB_RS12840 76751c41333d00b09a57f93562ee22d5 555 PIRSF PIRSF001432 1 555 1.2E-296 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPTB_RS08175 594e51499d159e247d431dd7d01e9091 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 1.2E-53 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS08175 594e51499d159e247d431dd7d01e9091 166 PANTHER PTHR35850 1 166 9.4E-94 T 22-04-2016 YPTB_RS08175 594e51499d159e247d431dd7d01e9091 166 PIRSF PIRSF028301 1 165 3.0E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS08175 594e51499d159e247d431dd7d01e9091 166 PANTHER PTHR35850:SF2 1 166 9.4E-94 T 22-04-2016 YPTB_RS08175 594e51499d159e247d431dd7d01e9091 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 2.0E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS17610 594e51499d159e247d431dd7d01e9091 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 1.2E-53 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS17610 594e51499d159e247d431dd7d01e9091 166 PANTHER PTHR35850 1 166 9.4E-94 T 22-04-2016 YPTB_RS17610 594e51499d159e247d431dd7d01e9091 166 PIRSF PIRSF028301 1 165 3.0E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS17610 594e51499d159e247d431dd7d01e9091 166 PANTHER PTHR35850:SF2 1 166 9.4E-94 T 22-04-2016 YPTB_RS17610 594e51499d159e247d431dd7d01e9091 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 2.0E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS02050 52b6077f1f783c4da845fee0afdcd006 378 Pfam PF15609 Phosphoribosyl transferase 32 218 3.8E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS02050 52b6077f1f783c4da845fee0afdcd006 378 PIRSF PIRSF020967 1 378 1.2E-221 T 22-04-2016 IPR011214 Uncharacterised conserved protein UCP020967 YPTB_RS02050 52b6077f1f783c4da845fee0afdcd006 378 SUPERFAMILY SSF53271 27 220 3.15E-19 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS02050 52b6077f1f783c4da845fee0afdcd006 378 Pfam PF12500 TRSP domain C terminus to PRTase_2 265 356 1.1E-20 T 22-04-2016 IPR022537 TRSP domain YPTB_RS02050 52b6077f1f783c4da845fee0afdcd006 378 Gene3D G3DSA:3.40.50.2020 56 211 2.6E-10 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS03020 80832d8c5fe80fbfa6f86f99a27e29c2 364 PANTHER PTHR33529:SF2 2 361 6.2E-140 T 22-04-2016 YPTB_RS03020 80832d8c5fe80fbfa6f86f99a27e29c2 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.0E-115 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 YPTB_RS03020 80832d8c5fe80fbfa6f86f99a27e29c2 364 PANTHER PTHR33529 2 361 6.2E-140 T 22-04-2016 YPTB_RS03020 80832d8c5fe80fbfa6f86f99a27e29c2 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 1.3E-75 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 18 380 7.1E-89 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 PIRSF PIRSF038994 1 387 6.9E-133 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 Gene3D G3DSA:2.30.40.10 4 54 1.5E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 PANTHER PTHR11113:SF5 1 387 0.0 T 22-04-2016 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 PANTHER PTHR11113 1 387 0.0 T 22-04-2016 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 Gene3D G3DSA:3.20.20.140 55 334 7.4E-91 T 22-04-2016 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 SUPERFAMILY SSF51338 8 52 1.26E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 SUPERFAMILY SSF51338 354 386 1.26E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 Pfam PF01979 Amidohydrolase family 49 382 1.0E-21 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 Gene3D G3DSA:2.30.40.10 335 384 1.9E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS16680 33f4a373fbca137962e87ff6cbce570c 388 SUPERFAMILY SSF51556 53 354 7.85E-91 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 PANTHER PTHR33121 356 650 9.3E-61 T 22-04-2016 YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 PANTHER PTHR33121 162 193 9.3E-61 T 22-04-2016 YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 Pfam PF00563 EAL domain 408 642 2.2E-62 T 22-04-2016 IPR001633 EAL domain YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 SMART SM00052 402 647 1.1E-95 T 22-04-2016 IPR001633 EAL domain YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 25 144 6.9E-58 T 22-04-2016 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 SUPERFAMILY SSF141868 407 654 2.62E-77 T 22-04-2016 IPR001633 EAL domain YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 Gene3D G3DSA:3.30.70.270 236 398 1.1E-29 T 22-04-2016 YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 Pfam PF00672 HAMP domain 152 221 1.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 Gene3D G3DSA:3.20.20.450 407 651 8.0E-80 T 22-04-2016 IPR001633 EAL domain YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 388 8.3E-24 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 392 4.9E-14 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 SMART SM00267 218 392 1.7E-25 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 PANTHER PTHR33121:SF13 356 650 9.3E-61 T 22-04-2016 YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 PANTHER PTHR33121:SF13 162 193 9.3E-61 T 22-04-2016 YPTB_RS20735 41df52311ca0b11bd8d58ea372e378d7 660 SUPERFAMILY SSF55073 238 394 1.73E-25 T 22-04-2016 IPR029787 Nucleotide cyclase YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 Gene3D G3DSA:1.10.287.10 3 89 1.8E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 SUPERFAMILY SSF47060 3 89 2.71E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 Pfam PF00312 Ribosomal protein S15 8 88 3.0E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.924 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.1E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 PANTHER PTHR23321 1 89 1.1E-47 T 22-04-2016 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 9.0E-40 T 22-04-2016 YPTB_RS02765 fc8b78415808bf4c0d8dc16b979cc7e6 89 SMART SM01387 8 88 1.2E-50 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 632 26.091 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 SUPERFAMILY SSF118116 453 631 1.96E-43 T 22-04-2016 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 2.2E-38 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 SUPERFAMILY SSF54211 191 330 4.55E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.9E-12 T 22-04-2016 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 Gene3D G3DSA:3.30.230.10 218 328 9.6E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.2E-102 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 SMART SM00853 458 593 8.2E-15 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 SUPERFAMILY SSF55874 1 204 1.17E-56 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 Pfam PF08676 MutL C terminal dimerisation domain 455 584 1.9E-26 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 SMART SM01340 212 330 7.6E-57 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 PANTHER PTHR10073 3 395 3.7E-162 T 22-04-2016 YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site YPTB_RS02450 acc6b6b5fa8b146f67ed9725f3e56c01 635 Gene3D G3DSA:3.30.565.10 2 207 1.1E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 132 3.4E-45 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 PANTHER PTHR30266:SF2 1 134 7.4E-58 T 22-04-2016 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 SUPERFAMILY SSF81330 12 128 4.18E-35 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 135 29.7 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 PANTHER PTHR30266 1 134 7.4E-58 T 22-04-2016 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 134 1.9E-54 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPTB_RS19870 bdf1bed5be211391ec3375e2a43e7e62 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 PANTHER PTHR30435 292 413 5.7E-74 T 22-04-2016 YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 PANTHER PTHR30435 1 117 5.7E-74 T 22-04-2016 YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 339 411 5.0E-16 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 Pfam PF07559 Flagellar basal body protein FlaE 170 295 1.2E-19 T 22-04-2016 IPR011491 Flagellar hook protein FlgE YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 Pfam PF00460 Flagella basal body rod protein 4 33 4.2E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 SUPERFAMILY SSF117143 73 375 2.22E-74 T 22-04-2016 YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 396 2.4E-95 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 PANTHER PTHR30435:SF1 292 413 5.7E-74 T 22-04-2016 YPTB_RS18045 f7a15a4480876671937875b92e850c1d 414 PANTHER PTHR30435:SF1 1 117 5.7E-74 T 22-04-2016 YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 SUPERFAMILY SSF51905 1 254 2.8E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 272 315 0.001 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 151 228 0.001 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 336 379 2.0E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 89 150 2.0E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 PANTHER PTHR23024 45 142 7.3E-64 T 22-04-2016 YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 339 1.4E-117 T 22-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPTB_RS08480 1a89ca063a371927abda7ee26095a37a 432 PANTHER PTHR23024:SF215 45 142 7.3E-64 T 22-04-2016 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 PANTHER PTHR30005 4 514 2.7E-272 T 22-04-2016 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 Gene3D G3DSA:3.30.420.150 133 312 2.0E-52 T 22-04-2016 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF53067 138 311 1.13E-47 T 22-04-2016 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF53067 14 134 4.98E-37 T 22-04-2016 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 PIRSF PIRSF001267 4 507 1.7E-203 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 PANTHER PTHR30005:SF4 4 514 2.7E-272 T 22-04-2016 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 Pfam PF02541 Ppx/GppA phosphatase family 27 309 1.6E-98 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 307 3.2E-101 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 Gene3D G3DSA:3.30.420.40 6 132 2.8E-44 T 22-04-2016 YPTB_RS15175 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF109604 314 507 8.63E-55 T 22-04-2016 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 SMART SM00322 60 125 1.6E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 PANTHER PTHR11760 2 232 4.8E-149 T 22-04-2016 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-100 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 PANTHER PTHR11760:SF19 2 232 4.8E-149 T 22-04-2016 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 22-04-2016 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.264 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54814 2 106 1.91E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPTB_RS19985 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF07650 KH domain 38 111 7.8E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 Gene3D G3DSA:1.10.530.10 106 264 1.8E-47 T 22-04-2016 YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 SMART SM00257 408 453 3.3E-9 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 SMART SM00257 355 399 1.7E-12 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 SUPERFAMILY SSF54106 407 453 1.11E-9 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 Pfam PF01476 LysM domain 409 451 1.1E-7 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 Pfam PF01476 LysM domain 356 397 2.8E-11 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 SUPERFAMILY SSF53955 108 259 7.74E-42 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 Gene3D G3DSA:3.10.350.10 354 398 1.3E-16 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 Gene3D G3DSA:3.10.350.10 406 453 1.9E-15 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 130 158 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 SUPERFAMILY SSF54106 355 398 3.79E-10 T 22-04-2016 IPR018392 LysM domain YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 Gene3D G3DSA:1.10.1220.10 265 291 3.3E-4 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 Pfam PF01464 Transglycosylase SLT domain 116 223 1.1E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 PANTHER PTHR21666:SF206 27 453 6.5E-189 T 22-04-2016 YPTB_RS16050 0641a7ec7fa7f9e2ee448c0f211f7c50 462 PANTHER PTHR21666 27 453 6.5E-189 T 22-04-2016 YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 34.168 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 PANTHER PTHR12029:SF31 1 158 5.1E-79 T 22-04-2016 YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 SUPERFAMILY SSF75217 1 157 2.88E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 Gene3D G3DSA:3.40.1280.10 1 160 6.1E-72 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 7.5E-71 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 PANTHER PTHR12029 1 158 5.1E-79 T 22-04-2016 YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 PIRSF PIRSF029256 1 159 7.2E-71 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPTB_RS00435 17268641d312c1e6d2a40323dd460f91 162 Pfam PF00588 SpoU rRNA Methylase family 2 147 4.0E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 Gene3D G3DSA:3.40.50.10490 4 200 6.6E-69 T 22-04-2016 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 Gene3D G3DSA:3.40.50.10490 205 380 2.7E-50 T 22-04-2016 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 386 5.5E-164 T 22-04-2016 IPR014180 Sugar isomerase, AgaS GO:0016861 KEGG: 00040+5.3.1.-|KEGG: 00052+5.3.1.- YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 PANTHER PTHR32502:SF3 235 388 3.0E-217 T 22-04-2016 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 PANTHER PTHR32502:SF3 1 185 3.0E-217 T 22-04-2016 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 PANTHER PTHR32502 235 388 3.0E-217 T 22-04-2016 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 PANTHER PTHR32502 1 185 3.0E-217 T 22-04-2016 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 Pfam PF01380 SIS domain 229 358 1.2E-12 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 Pfam PF01380 SIS domain 54 192 5.6E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS16655 92bb86f917f33807bb0f1b905d804049 388 SUPERFAMILY SSF53697 19 377 1.11E-55 T 22-04-2016 YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 Pfam PF00664 ABC transporter transmembrane region 24 292 3.7E-21 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 Gene3D G3DSA:3.40.50.300 338 567 4.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 Gene3D G3DSA:1.20.1560.10 8 323 7.3E-47 T 22-04-2016 YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 SUPERFAMILY SSF90123 9 330 6.02E-52 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 Pfam PF00005 ABC transporter 355 502 2.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 PANTHER PTHR24222 4 589 0.0 T 22-04-2016 YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 SMART SM00382 364 548 3.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 SUPERFAMILY SSF52540 328 571 2.93E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17805 af7dc9805f212a7dfdec4e625ce65ae7 590 PANTHER PTHR24222:SF24 4 589 0.0 T 22-04-2016 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PANTHER PTHR10724 1 514 2.4E-278 T 22-04-2016 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 255 371 1.37E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 104 185 4.25E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 190 260 2.8E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 19 87 5.0E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 449 520 2.0E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 362 434 1.8E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 275 347 6.5E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 103 171 8.1E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 363 444 4.77E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 363 443 6.4E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 21 101 8.6E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 192 279 9.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 280 362 4.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PIRSF PIRSF002111 1 534 5.1E-217 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 429 533 5.74E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 1 112 4.52E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.3E-236 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 102 172 3.9E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 444 521 1.9E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 PANTHER PTHR10724:SF6 1 514 2.4E-278 T 22-04-2016 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 103 171 6.7E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 449 520 4.2E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 279 347 2.7E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 20 78 6.6E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 361 434 3.2E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS07820 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 Gene3D G3DSA:3.30.470.10 1 106 2.3E-32 T 22-04-2016 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 3.5E-117 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 PANTHER PTHR11825:SF55 1 249 4.9E-100 T 22-04-2016 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 Gene3D G3DSA:3.20.10.10 123 256 8.4E-40 T 22-04-2016 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 SUPERFAMILY SSF56752 1 256 1.57E-68 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 PANTHER PTHR11825 1 249 4.9E-100 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS13415 2521769b58c174cfbf4f068a012fbbcb 268 Pfam PF01063 Amino-transferase class IV 24 247 9.0E-51 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 4.3E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 4.0E-26 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 3.3E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946 240 571 0.0 T 22-04-2016 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946 615 859 0.0 T 22-04-2016 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.8E-78 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.90.740.10 223 424 2.8E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF47323 662 859 1.64E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.40.50.620 4 222 2.5E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.40.50.620 425 573 2.5E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.40.50.620 618 647 2.5E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF52374 416 668 8.56E-140 T 22-04-2016 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF52374 5 226 8.56E-140 T 22-04-2016 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946:SF7 240 571 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946:SF7 615 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF50677 226 415 5.55E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.378 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 5.5E-16 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YPTB_RS06075 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:1.10.730.10 648 795 1.5E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 1.5E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 Gene3D G3DSA:3.40.50.720 1 149 6.8E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 SUPERFAMILY SSF51735 4 158 2.24E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 PANTHER PTHR22604:SF123 1 376 3.1E-99 T 22-04-2016 YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 Gene3D G3DSA:3.30.360.10 150 277 9.6E-42 T 22-04-2016 YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 Gene3D G3DSA:3.30.360.10 325 375 9.6E-42 T 22-04-2016 YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 SUPERFAMILY SSF55347 135 323 2.45E-32 T 22-04-2016 YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 258 4.6E-6 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YPTB_RS05935 f66e5ba2cbf241c7b3c21ae821b1bf40 377 PANTHER PTHR22604 1 376 3.1E-99 T 22-04-2016 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.30.1360.40 239 332 4.0E-24 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 742 0.0 T 22-04-2016 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:2.120.10.90 497 707 1.3E-23 T 22-04-2016 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 33.855 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 PANTHER PTHR10169 5 523 0.0 T 22-04-2016 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.90.199.10 31 238 4.0E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.90.199.10 334 398 4.0E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 634 5.7E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 2.0E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 8.4E-133 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 SUPERFAMILY SSF56719 32 483 4.84E-153 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 SUPERFAMILY SSF101904 498 741 6.02E-51 T 22-04-2016 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 PANTHER PTHR10169:SF30 5 523 0.0 T 22-04-2016 YPTB_RS18330 4c196a703a4c15fd4fdaece72a1ac489 757 SMART SM00434 12 462 2.1E-235 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS07945 2bf07ce8cbf51a41d56f63a7f8af67ca 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 41.599 T 22-04-2016 IPR009809 Cell division protein ZapC YPTB_RS07945 2bf07ce8cbf51a41d56f63a7f8af67ca 183 PIRSF PIRSF010252 1 179 1.2E-60 T 22-04-2016 IPR009809 Cell division protein ZapC YPTB_RS07945 2bf07ce8cbf51a41d56f63a7f8af67ca 183 Pfam PF07126 Cell-division protein ZapC 3 169 8.9E-71 T 22-04-2016 IPR009809 Cell division protein ZapC YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 PANTHER PTHR11615:SF102 18 281 4.4E-281 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 PANTHER PTHR11615:SF102 298 368 4.4E-281 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 PANTHER PTHR11615:SF102 398 749 4.4E-281 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 Pfam PF00384 Molybdopterin oxidoreductase 52 508 1.2E-58 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 453 470 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 SUPERFAMILY SSF50692 618 750 2.69E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 Gene3D G3DSA:3.40.228.10 146 350 2.1E-44 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 Gene3D G3DSA:3.90.55.10 455 557 2.5E-36 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 Gene3D G3DSA:2.40.40.20 599 751 9.3E-47 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 Gene3D G3DSA:3.40.50.740 351 454 7.4E-42 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 Gene3D G3DSA:3.40.50.740 46 145 7.4E-42 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 SUPERFAMILY SSF53706 10 627 1.09E-153 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 PANTHER PTHR11615 18 281 4.4E-281 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 PANTHER PTHR11615 298 368 4.4E-281 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 PANTHER PTHR11615 398 749 4.4E-281 T 22-04-2016 YPTB_RS16485 ba98aa076e4665876c34f2cac62e22e0 753 Pfam PF01568 Molydopterin dinucleotide binding domain 625 745 1.3E-23 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 202 1.4E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 Gene3D G3DSA:1.10.287.990 20 90 7.6E-32 T 22-04-2016 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 SUPERFAMILY SSF46609 1 90 3.27E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 SUPERFAMILY SSF54719 95 206 3.93E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.7E-31 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 PANTHER PTHR11404 1 207 3.9E-108 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS21190 f1bd1488ff5931b279c69926a564d05b 207 PIRSF PIRSF000349 1 207 6.4E-80 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS09655 da69339b3dceb0c009f754b10f929fe5 168 Gene3D G3DSA:1.10.530.40 28 167 1.2E-51 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 YPTB_RS09655 da69339b3dceb0c009f754b10f929fe5 168 SUPERFAMILY SSF53955 10 167 8.19E-54 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS09655 da69339b3dceb0c009f754b10f929fe5 168 PANTHER PTHR38107:SF1 1 167 1.6E-64 T 22-04-2016 YPTB_RS09655 da69339b3dceb0c009f754b10f929fe5 168 PANTHER PTHR38107 1 167 1.6E-64 T 22-04-2016 YPTB_RS09655 da69339b3dceb0c009f754b10f929fe5 168 Pfam PF00959 Phage lysozyme 53 157 6.5E-19 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 YPTB_RS11060 83e0a928e3ee7f7b24f8142bc7b020c2 345 PANTHER PTHR24220:SF150 5 229 2.9E-115 T 22-04-2016 YPTB_RS11060 83e0a928e3ee7f7b24f8142bc7b020c2 345 PANTHER PTHR24220 5 229 2.9E-115 T 22-04-2016 YPTB_RS11060 83e0a928e3ee7f7b24f8142bc7b020c2 345 SMART SM00382 28 201 4.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11060 83e0a928e3ee7f7b24f8142bc7b020c2 345 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS11060 83e0a928e3ee7f7b24f8142bc7b020c2 345 Gene3D G3DSA:3.40.50.300 4 224 4.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11060 83e0a928e3ee7f7b24f8142bc7b020c2 345 SUPERFAMILY SSF52540 4 230 3.59E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11060 83e0a928e3ee7f7b24f8142bc7b020c2 345 Pfam PF00005 ABC transporter 21 151 1.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 95 105 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 Pfam PF01230 HIT domain 12 109 5.5E-30 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 SUPERFAMILY SSF54197 2 112 2.47E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 PANTHER PTHR23089 2 112 3.1E-49 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 PANTHER PTHR23089:SF2 2 112 3.1E-49 T 22-04-2016 YPTB_RS13335 c8be240148e8cce40a78344b74191386 117 Gene3D G3DSA:3.30.428.10 3 110 9.4E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPTB_RS12720 943a73632c95b43f38cccf868c366cd6 151 Pfam PF10697 Protein of unknown function (DUF2502) 23 102 9.0E-34 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 6.0E-59 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 Gene3D G3DSA:3.30.70.1450 425 483 1.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 Gene3D G3DSA:3.30.465.10 497 570 1.0E-13 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 SMART SM01091 492 572 1.2E-20 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 49.934 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 Pfam PF03471 Transporter associated domain 493 570 2.8E-14 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 PANTHER PTHR32507:SF7 1 575 3.8E-279 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 SUPERFAMILY SSF56176 497 570 6.82E-13 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 SUPERFAMILY SSF116726 420 483 1.14E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 PANTHER PTHR32507 1 575 3.8E-279 T 22-04-2016 YPTB_RS13565 3b4ad80866e2c21fd2d99ec27131c3e8 575 Pfam PF02080 TrkA-C domain 425 483 5.7E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS05630 05486c369ca199bfe448a3077bf512c0 159 PIRSF PIRSF006181 1 159 1.7E-54 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPTB_RS05630 05486c369ca199bfe448a3077bf512c0 159 Gene3D G3DSA:3.90.960.10 1 157 3.1E-59 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPTB_RS05630 05486c369ca199bfe448a3077bf512c0 159 SUPERFAMILY SSF55826 2 155 5.89E-44 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPTB_RS05630 05486c369ca199bfe448a3077bf512c0 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 8.5E-24 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPTB_RS05630 05486c369ca199bfe448a3077bf512c0 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 3.3E-54 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPTB_RS05630 05486c369ca199bfe448a3077bf512c0 159 PANTHER PTHR30411 1 158 1.3E-72 T 22-04-2016 YPTB_RS05630 05486c369ca199bfe448a3077bf512c0 159 PANTHER PTHR30411:SF0 1 158 1.3E-72 T 22-04-2016 YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 Gene3D G3DSA:1.20.200.10 120 389 1.7E-87 T 22-04-2016 YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.9E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 Gene3D G3DSA:1.10.40.30 390 445 4.6E-34 T 22-04-2016 YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 7.2E-53 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 SUPERFAMILY SSF48557 10 454 2.83E-105 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 Pfam PF00206 Lyase 14 312 9.3E-78 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 PANTHER PTHR11444 4 455 0.0 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 Gene3D G3DSA:1.10.275.10 1 119 6.9E-51 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPTB_RS13230 138eee08e9f0a39a3c3075b6ade0339d 456 PANTHER PTHR11444:SF17 4 455 0.0 T 22-04-2016 YPTB_RS02885 241751e87d874da801f732ae29d67c6a 388 Pfam PF05426 Alginate lyase 56 335 1.1E-76 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPTB_RS02885 241751e87d874da801f732ae29d67c6a 388 PANTHER PTHR41379 1 388 7.4E-183 T 22-04-2016 YPTB_RS02885 241751e87d874da801f732ae29d67c6a 388 PANTHER PTHR41379:SF1 1 388 7.4E-183 T 22-04-2016 YPTB_RS02885 241751e87d874da801f732ae29d67c6a 388 SUPERFAMILY SSF48230 63 338 2.84E-56 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPTB_RS02885 241751e87d874da801f732ae29d67c6a 388 Gene3D G3DSA:1.50.10.110 38 361 1.1E-79 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.71 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 PANTHER PTHR30055:SF58 1 193 8.2E-123 T 22-04-2016 YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 SUPERFAMILY SSF46689 10 73 9.48E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 SUPERFAMILY SSF48498 86 176 2.36E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 PANTHER PTHR30055 1 193 8.2E-123 T 22-04-2016 YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 1.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS00315 a474a8c6dc171e169fb3a3c4dfd50011 198 Gene3D G3DSA:1.10.357.10 8 179 1.6E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 SUPERFAMILY SSF56784 1 212 7.43E-28 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 198 2.4E-48 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 Gene3D G3DSA:1.20.1440.100 16 79 4.4E-17 T 22-04-2016 YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 PANTHER PTHR10000:SF10 1 213 6.0E-123 T 22-04-2016 YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 Gene3D G3DSA:3.40.50.1000 80 217 1.3E-39 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 3.2E-34 T 22-04-2016 YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 PANTHER PTHR10000 1 213 6.0E-123 T 22-04-2016 YPTB_RS07440 34cdcedf32dec717e2aa6b798cdc59b7 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 4.4E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 YPTB_RS15745 884f6e6c26299d299b4c21e471205f42 160 PANTHER PTHR30087 25 155 3.6E-38 T 22-04-2016 YPTB_RS15745 884f6e6c26299d299b4c21e471205f42 160 PANTHER PTHR30087:SF0 25 155 3.6E-38 T 22-04-2016 YPTB_RS15745 884f6e6c26299d299b4c21e471205f42 160 Pfam PF08349 Protein of unknown function (DUF1722) 41 157 2.3E-36 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 YPTB_RS19025 581f4ca194d9b253819bba5b0a765411 84 PANTHER PTHR12735:SF24 1 84 1.0E-33 T 22-04-2016 YPTB_RS19025 581f4ca194d9b253819bba5b0a765411 84 Gene3D G3DSA:3.30.300.90 1 80 1.8E-28 T 22-04-2016 IPR002634 BolA protein YPTB_RS19025 581f4ca194d9b253819bba5b0a765411 84 Pfam PF01722 BolA-like protein 18 74 7.2E-16 T 22-04-2016 IPR002634 BolA protein YPTB_RS19025 581f4ca194d9b253819bba5b0a765411 84 PANTHER PTHR12735 1 84 1.0E-33 T 22-04-2016 YPTB_RS19025 581f4ca194d9b253819bba5b0a765411 84 PIRSF PIRSF003113 1 83 1.4E-22 T 22-04-2016 IPR002634 BolA protein YPTB_RS19025 581f4ca194d9b253819bba5b0a765411 84 SUPERFAMILY SSF82657 2 82 7.72E-30 T 22-04-2016 IPR002634 BolA protein YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 153 6.5E-39 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 234 1.6E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 Gene3D G3DSA:2.60.40.360 36 154 3.7E-44 T 22-04-2016 IPR008962 PapD-like YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 PRINTS PR00969 Pili chaperone signature 82 103 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 PRINTS PR00969 Pili chaperone signature 171 186 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 PRINTS PR00969 Pili chaperone signature 112 129 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 PRINTS PR00969 Pili chaperone signature 36 45 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 PRINTS PR00969 Pili chaperone signature 135 150 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 Gene3D G3DSA:2.60.40.1070 159 247 8.5E-25 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 SUPERFAMILY SSF49354 36 153 3.4E-38 T 22-04-2016 IPR008962 PapD-like YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 PANTHER PTHR30251:SF5 6 244 7.8E-152 T 22-04-2016 YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 SUPERFAMILY SSF49584 160 247 1.26E-20 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS21035 14e2fd2ca06c0aecdbe42e976a375a8f 255 PANTHER PTHR30251 6 244 7.8E-152 T 22-04-2016 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 1.2E-74 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 SUPERFAMILY SSF53681 118 229 4.91E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 PANTHER PTHR21198:SF7 1 228 1.4E-98 T 22-04-2016 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 8.2E-59 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 SUPERFAMILY SSF53681 1 116 9.48E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 Gene3D G3DSA:3.40.50.1860 1 112 1.1E-43 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 Gene3D G3DSA:3.40.50.1860 113 216 1.5E-37 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS14235 dda0efa5695725d718e4d5ab5f83e0ee 230 PANTHER PTHR21198 1 228 1.4E-98 T 22-04-2016 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 Gene3D G3DSA:3.40.50.170 4 208 1.3E-71 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 SUPERFAMILY SSF53328 5 207 2.62E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 1.1E-111 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 SUPERFAMILY SSF50486 208 309 1.88E-36 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 PANTHER PTHR11138 2 309 3.5E-121 T 22-04-2016 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.8E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 Pfam PF00551 Formyl transferase 6 181 3.2E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.621 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS19855 17b705669bc16a01b0d691933045135d 315 Gene3D G3DSA:3.10.25.10 210 306 1.5E-36 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 Gene3D G3DSA:3.40.50.2000 4 196 5.4E-76 T 22-04-2016 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 347 1.1E-113 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.336 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 SUPERFAMILY SSF53756 6 351 2.47E-128 T 22-04-2016 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 PANTHER PTHR21015 1 356 4.9E-137 T 22-04-2016 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 319 3.9E-34 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 Gene3D G3DSA:3.40.50.2000 254 334 5.4E-5 T 22-04-2016 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.4E-48 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03855 f8995904fb8bc4ffec17be7655edd727 356 PANTHER PTHR21015:SF22 1 356 4.9E-137 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.192 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.0E-78 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 1303 1384 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 963 1157 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 1177 1262 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.5E-89 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.5E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 6.5E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.425 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 1303 1384 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 963 1157 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 1177 1262 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 SUPERFAMILY SSF64484 1133 1364 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.50.100 1156 1209 4.6E-5 T 22-04-2016 YPTB_RS01685 5f2dd5b26b67450b5f6388b90c0d917c 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 SUPERFAMILY SSF55136 127 272 3.14E-18 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 Gene3D G3DSA:1.10.10.60 9 58 7.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 SUPERFAMILY SSF46689 8 57 6.66E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 SMART SM00342 23 106 1.4E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 Gene3D G3DSA:1.10.10.60 61 122 3.9E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 PANTHER PTHR11019:SF118 1 114 4.2E-75 T 22-04-2016 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 Gene3D G3DSA:3.20.80.10 125 296 1.2E-24 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 Pfam PF12833 Helix-turn-helix domain 30 107 9.5E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 SUPERFAMILY SSF46689 61 111 6.72E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 Pfam PF06445 GyrI-like small molecule binding domain 129 281 4.8E-19 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 5.2E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 5.2E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS11820 e82fdd150fadab900cb6ec93bc1ab41d 297 PANTHER PTHR11019 1 114 4.2E-75 T 22-04-2016 YPTB_RS00270 623cbc260f12bd2212df51078cd9e2e9 219 PANTHER PTHR12029 1 178 2.3E-73 T 22-04-2016 YPTB_RS00270 623cbc260f12bd2212df51078cd9e2e9 219 SUPERFAMILY SSF75217 3 163 7.19E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS00270 623cbc260f12bd2212df51078cd9e2e9 219 Pfam PF12105 SpoU, rRNA methylase, C-terminal 152 207 9.8E-25 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 YPTB_RS00270 623cbc260f12bd2212df51078cd9e2e9 219 PANTHER PTHR12029:SF45 1 178 2.3E-73 T 22-04-2016 YPTB_RS00270 623cbc260f12bd2212df51078cd9e2e9 219 Gene3D G3DSA:3.40.1280.10 4 162 1.7E-48 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS00270 623cbc260f12bd2212df51078cd9e2e9 219 Pfam PF00588 SpoU rRNA Methylase family 9 148 6.2E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPTB_RS08180 655dd5deeb2966177a11dd79cb4bbe06 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 93 512 1.9E-170 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS08180 655dd5deeb2966177a11dd79cb4bbe06 516 PANTHER PTHR35565:SF1 3 46 0.0 T 22-04-2016 YPTB_RS08180 655dd5deeb2966177a11dd79cb4bbe06 516 PANTHER PTHR35565:SF1 64 516 0.0 T 22-04-2016 YPTB_RS08180 655dd5deeb2966177a11dd79cb4bbe06 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 50 512 6.0E-204 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS08180 655dd5deeb2966177a11dd79cb4bbe06 516 PANTHER PTHR35565 3 46 0.0 T 22-04-2016 YPTB_RS08180 655dd5deeb2966177a11dd79cb4bbe06 516 PANTHER PTHR35565 64 516 0.0 T 22-04-2016 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 Gene3D G3DSA:3.10.20.30 5 108 2.7E-35 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 3.5E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 PANTHER PTHR23426 7 110 2.2E-43 T 22-04-2016 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 SUPERFAMILY SSF54292 4 109 7.27E-35 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 83 91 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 42 52 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 60 74 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 YPTB_RS15440 2b129365217a3a463907e3fcce90b59a 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 9.2E-62 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 PANTHER PTHR21666 1 432 4.5E-229 T 22-04-2016 YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 PANTHER PTHR21666:SF207 1 432 4.5E-229 T 22-04-2016 YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF01551 Peptidase family M23 311 405 1.3E-33 T 22-04-2016 IPR016047 Peptidase M23 YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 Gene3D G3DSA:2.70.70.10 265 407 1.2E-48 T 22-04-2016 YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF04225 Opacity-associated protein A LysM-like domain 95 159 1.5E-6 T 22-04-2016 IPR007340 Opacity-associated protein A YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 SMART SM00257 96 141 2.9E-5 T 22-04-2016 IPR018392 LysM domain YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 Gene3D G3DSA:3.10.350.10 96 138 2.3E-6 T 22-04-2016 IPR018392 LysM domain YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 1.6E-8 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal YPTB_RS11210 44defdb5e381c8851e8b96979b05cb02 438 SUPERFAMILY SSF51261 162 406 1.31E-69 T 22-04-2016 IPR011055 Duplicated hybrid motif YPTB_RS10235 7fae1e12dac1769f14e98bba809575e2 346 Pfam PF04860 Phage portal protein 103 323 6.0E-9 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein YPTB_RS10235 7fae1e12dac1769f14e98bba809575e2 346 PIRSF PIRSF018494 1 346 1.9E-162 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTB_RS10235 7fae1e12dac1769f14e98bba809575e2 346 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 54 332 1.6E-76 T 22-04-2016 IPR006430 Phage portal protein PBSX family YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 57.559 T 22-04-2016 IPR026589 Cell division protein FtsP GO:0043093 YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 SUPERFAMILY SSF49503 3 166 3.88E-26 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 SUPERFAMILY SSF49503 316 467 2.6E-17 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 Gene3D G3DSA:2.60.40.420 174 288 2.9E-30 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 Gene3D G3DSA:2.60.40.420 34 173 5.3E-21 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 Gene3D G3DSA:2.60.40.420 360 467 9.7E-11 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 Pfam PF07731 Multicopper oxidase 362 468 1.0E-13 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 SUPERFAMILY SSF49503 173 296 2.93E-31 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 Pfam PF07732 Multicopper oxidase 53 167 6.1E-26 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 PANTHER PTHR11709 53 305 4.0E-184 T 22-04-2016 YPTB_RS18320 2789b42b9606eac5f827eb36d1c4511e 474 PANTHER PTHR11709:SF69 53 305 4.0E-184 T 22-04-2016 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 Pfam PF00924 Mechanosensitive ion channel 883 1081 1.0E-51 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 SUPERFAMILY SSF82689 993 1088 3.79E-14 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 SUPERFAMILY SSF82861 841 924 4.84E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 955 989 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 PANTHER PTHR30347 1 1104 0.0 T 22-04-2016 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 Gene3D G3DSA:2.30.30.60 941 990 1.3E-16 T 22-04-2016 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 SUPERFAMILY SSF50182 926 991 9.81E-17 T 22-04-2016 IPR010920 LSM domain YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 486 822 9.9E-117 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 Gene3D G3DSA:3.30.70.100 996 1080 1.3E-6 T 22-04-2016 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 PANTHER PTHR30347:SF0 1 1104 0.0 T 22-04-2016 YPTB_RS02385 cbb11bee423dcf20e776c9f5f48c94da 1113 Pfam PF12795 Mechanosensitive ion channel porin domain 36 264 1.1E-62 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain YPTB_RS03525 7a414036476760cba4f3bf26e9630788 154 Pfam PF12821 Threonine/Serine exporter, ThrE 10 144 3.9E-35 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE YPTB_RS03525 7a414036476760cba4f3bf26e9630788 154 PANTHER PTHR34390 1 154 5.2E-54 T 22-04-2016 YPTB_RS03525 7a414036476760cba4f3bf26e9630788 154 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 154 35.555 T 22-04-2016 IPR020914 Uncharacterised protein family UPF0442 YPTB_RS07595 8df7a6e8bec0da6e2bd6ead7869417ce 281 SUPERFAMILY SSF103481 38 136 3.92E-14 T 22-04-2016 YPTB_RS07595 8df7a6e8bec0da6e2bd6ead7869417ce 281 PANTHER PTHR22911:SF6 2 280 1.4E-67 T 22-04-2016 YPTB_RS07595 8df7a6e8bec0da6e2bd6ead7869417ce 281 PANTHER PTHR22911 2 280 1.4E-67 T 22-04-2016 YPTB_RS07595 8df7a6e8bec0da6e2bd6ead7869417ce 281 SUPERFAMILY SSF103481 177 277 1.96E-12 T 22-04-2016 YPTB_RS07595 8df7a6e8bec0da6e2bd6ead7869417ce 281 Pfam PF00892 EamA-like transporter family 4 133 5.7E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS07595 8df7a6e8bec0da6e2bd6ead7869417ce 281 Pfam PF00892 EamA-like transporter family 146 270 1.8E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS04655 3d30ee727d9f22e019dea1d4a08cc806 447 PIRSF PIRSF004539 1 447 3.1E-186 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPTB_RS04655 3d30ee727d9f22e019dea1d4a08cc806 447 PANTHER PTHR36106 1 447 2.8E-288 T 22-04-2016 YPTB_RS04655 3d30ee727d9f22e019dea1d4a08cc806 447 PANTHER PTHR36106:SF3 1 447 2.8E-288 T 22-04-2016 YPTB_RS04655 3d30ee727d9f22e019dea1d4a08cc806 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 1.1E-151 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPTB_RS04655 3d30ee727d9f22e019dea1d4a08cc806 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 443 2.3E-160 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF04539 Sigma-70 region 3 176 250 2.5E-20 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 3.6E-144 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Gene3D G3DSA:1.10.10.10 169 218 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 PANTHER PTHR30603 13 331 3.0E-210 T 22-04-2016 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 PANTHER PTHR30603:SF15 13 331 3.0E-210 T 22-04-2016 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF04545 Sigma-70, region 4 264 317 1.8E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Gene3D G3DSA:1.10.601.10 53 165 1.6E-54 T 22-04-2016 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.924 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 SUPERFAMILY SSF88946 58 166 1.96E-45 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF04542 Sigma-70 region 2 96 165 2.9E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Gene3D G3DSA:1.10.10.10 259 324 2.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 319 4.2E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 5.2E-11 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS04310 03e9d7d0b280ffd118c8e849e1d8b881 332 SUPERFAMILY SSF88659 227 324 1.68E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS21385 4774785d802f587c2ffd76645fd8e9df 318 Gene3D G3DSA:1.10.3720.10 25 315 2.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21385 4774785d802f587c2ffd76645fd8e9df 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.0E-94 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 YPTB_RS21385 4774785d802f587c2ffd76645fd8e9df 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 308 4.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21385 4774785d802f587c2ffd76645fd8e9df 318 SUPERFAMILY SSF161098 28 304 4.58E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21385 4774785d802f587c2ffd76645fd8e9df 318 PANTHER PTHR30425:SF1 12 318 1.4E-157 T 22-04-2016 YPTB_RS21385 4774785d802f587c2ffd76645fd8e9df 318 PANTHER PTHR30425 12 318 1.4E-157 T 22-04-2016 YPTB_RS18275 9246da188793d32dbf801ead733070c2 143 PANTHER PTHR30558 11 143 1.1E-85 T 22-04-2016 YPTB_RS18275 9246da188793d32dbf801ead733070c2 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 5.5E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 YPTB_RS18275 9246da188793d32dbf801ead733070c2 143 PANTHER PTHR30558:SF9 11 143 1.1E-85 T 22-04-2016 YPTB_RS18275 9246da188793d32dbf801ead733070c2 143 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 2.0E-64 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 YPTB_RS14175 03a4d516e88dfa76868e475c38bd703c 240 Hamap MF_02022 Cell division protein DedD [dedD]. 10 238 26.442 T 22-04-2016 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 YPTB_RS14175 03a4d516e88dfa76868e475c38bd703c 240 PANTHER PTHR38687:SF1 2 240 1.0E-71 T 22-04-2016 YPTB_RS14175 03a4d516e88dfa76868e475c38bd703c 240 Gene3D G3DSA:3.30.70.1070 159 234 2.4E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS14175 03a4d516e88dfa76868e475c38bd703c 240 Pfam PF05036 Sporulation related domain 161 233 1.7E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS14175 03a4d516e88dfa76868e475c38bd703c 240 SUPERFAMILY SSF110997 161 234 1.7E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS14175 03a4d516e88dfa76868e475c38bd703c 240 PANTHER PTHR38687 2 240 1.0E-71 T 22-04-2016 YPTB_RS20705 665aeabbaea49b7715983f1ea1a73f40 314 Pfam PF00294 pfkB family carbohydrate kinase 4 308 1.9E-68 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS20705 665aeabbaea49b7715983f1ea1a73f40 314 PANTHER PTHR10584:SF57 1 308 2.8E-189 T 22-04-2016 YPTB_RS20705 665aeabbaea49b7715983f1ea1a73f40 314 SUPERFAMILY SSF53613 1 307 1.26E-73 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS20705 665aeabbaea49b7715983f1ea1a73f40 314 Gene3D G3DSA:3.40.1190.20 1 305 1.2E-75 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS20705 665aeabbaea49b7715983f1ea1a73f40 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPTB_RS20705 665aeabbaea49b7715983f1ea1a73f40 314 PANTHER PTHR10584 1 308 2.8E-189 T 22-04-2016 YPTB_RS13250 8370d0d704f54f18922204e75c25c446 373 SMART SM00558 87 215 2.2E-9 T 22-04-2016 IPR003347 JmjC domain YPTB_RS13250 8370d0d704f54f18922204e75c25c446 373 Pfam PF08007 Cupin superfamily protein 10 310 4.4E-101 T 22-04-2016 IPR003347 JmjC domain YPTB_RS13250 8370d0d704f54f18922204e75c25c446 373 Gene3D G3DSA:2.60.120.650 6 205 2.5E-44 T 22-04-2016 YPTB_RS13250 8370d0d704f54f18922204e75c25c446 373 PANTHER PTHR13096 7 353 7.9E-79 T 22-04-2016 YPTB_RS13250 8370d0d704f54f18922204e75c25c446 373 SUPERFAMILY SSF51197 7 289 1.15E-74 T 22-04-2016 YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 Pfam PF13247 4Fe-4S dicluster domain 59 152 9.5E-27 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 Gene3D G3DSA:3.30.70.20 4 74 1.1E-29 T 22-04-2016 YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 Gene3D G3DSA:3.30.70.20 126 186 1.1E-29 T 22-04-2016 YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 Gene3D G3DSA:3.30.70.20 75 125 4.9E-25 T 22-04-2016 YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 PANTHER PTHR11938 3 160 9.1E-82 T 22-04-2016 YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 8.4E-78 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 SUPERFAMILY SSF54862 3 200 4.08E-68 T 22-04-2016 YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 PANTHER PTHR11938:SF85 3 160 9.1E-82 T 22-04-2016 YPTB_RS04470 bfc1b65c926b47fcd06ed76fb36e31b7 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0022 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS18565 ba7b5ab099ad441dfb596f53285ecbe9 145 PANTHER PTHR39332:SF2 1 145 2.3E-14 T 22-04-2016 YPTB_RS18565 ba7b5ab099ad441dfb596f53285ecbe9 145 Gene3D G3DSA:3.30.530.20 4 143 1.1E-28 T 22-04-2016 IPR023393 START-like domain YPTB_RS18565 ba7b5ab099ad441dfb596f53285ecbe9 145 PANTHER PTHR39332 1 145 2.3E-14 T 22-04-2016 YPTB_RS18565 ba7b5ab099ad441dfb596f53285ecbe9 145 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 115 1.6E-13 T 22-04-2016 IPR019587 Polyketide cyclase/dehydrase YPTB_RS18565 ba7b5ab099ad441dfb596f53285ecbe9 145 SUPERFAMILY SSF55961 2 141 4.4E-24 T 22-04-2016 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 Gene3D G3DSA:3.40.50.1970 6 160 2.0E-32 T 22-04-2016 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 Gene3D G3DSA:1.20.1090.10 162 358 3.7E-49 T 22-04-2016 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 PIRSF PIRSF000112 2 363 4.8E-114 T 22-04-2016 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 PANTHER PTHR11496 1 363 3.0E-182 T 22-04-2016 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 SUPERFAMILY SSF56796 10 357 1.83E-61 T 22-04-2016 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 350 2.7E-46 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPTB_RS08620 c7421fb27747acdf88ca873d623be70d 363 PANTHER PTHR11496:SF55 1 363 3.0E-182 T 22-04-2016 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 3.2E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 3.2E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 3.2E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 235 247 3.2E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 3.2E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 SUPERFAMILY SSF56935 22 371 4.71E-85 T 22-04-2016 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 Pfam PF00267 Gram-negative porin 27 371 4.0E-139 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 241 258 3.4E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.4E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 3.4E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 279 298 3.4E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 3.4E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 3.4E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PANTHER PTHR34501 2 371 9.4E-295 T 22-04-2016 YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 Gene3D G3DSA:2.40.160.10 22 371 1.3E-104 T 22-04-2016 IPR023614 Porin domain YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 323 339 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site YPTB_RS06970 154d2893af4c3852670b7d08018bf49a 371 PANTHER PTHR34501:SF1 2 371 9.4E-295 T 22-04-2016 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 494 5.5E-194 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 SUPERFAMILY SSF101960 41 86 1.31E-134 T 22-04-2016 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 SUPERFAMILY SSF101960 133 500 1.31E-134 T 22-04-2016 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 PANTHER PTHR30508 119 503 7.0E-292 T 22-04-2016 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 PANTHER PTHR30508 2 99 7.0E-292 T 22-04-2016 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 PANTHER PTHR30508:SF1 119 503 7.0E-292 T 22-04-2016 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 PANTHER PTHR30508:SF1 2 99 7.0E-292 T 22-04-2016 YPTB_RS12610 adbe9656e7e7fd4cf60f2627298e1334 503 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 474 6.5E-68 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YPTB_RS07000 ded6690094251fc3529f7c781c749b4c 329 PANTHER PTHR15032 34 329 9.9E-126 T 22-04-2016 YPTB_RS07000 ded6690094251fc3529f7c781c749b4c 329 Gene3D G3DSA:3.60.15.10 53 328 3.3E-83 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07000 ded6690094251fc3529f7c781c749b4c 329 Pfam PF12706 Beta-lactamase superfamily domain 90 286 6.6E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07000 ded6690094251fc3529f7c781c749b4c 329 SUPERFAMILY SSF56281 72 292 2.75E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07000 ded6690094251fc3529f7c781c749b4c 329 PIRSF PIRSF038896 1 329 8.0E-99 T 22-04-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 YPTB_RS07000 ded6690094251fc3529f7c781c749b4c 329 PANTHER PTHR15032:SF4 34 329 9.9E-126 T 22-04-2016 YPTB_RS19370 028a8c5e4e6be57bcdc67f1d3e251b44 270 SMART SM00849 39 239 0.0041 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS19370 028a8c5e4e6be57bcdc67f1d3e251b44 270 PANTHER PTHR23200:SF40 6 268 1.5E-71 T 22-04-2016 YPTB_RS19370 028a8c5e4e6be57bcdc67f1d3e251b44 270 Pfam PF00753 Metallo-beta-lactamase superfamily 41 203 3.4E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS19370 028a8c5e4e6be57bcdc67f1d3e251b44 270 PANTHER PTHR23200 6 268 1.5E-71 T 22-04-2016 YPTB_RS19370 028a8c5e4e6be57bcdc67f1d3e251b44 270 SUPERFAMILY SSF56281 31 243 1.57E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS19370 028a8c5e4e6be57bcdc67f1d3e251b44 270 Gene3D G3DSA:3.60.15.10 32 242 1.5E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 Gene3D G3DSA:3.10.580.10 269 307 8.9E-4 T 22-04-2016 YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 PANTHER PTHR24220 3 296 4.4E-164 T 22-04-2016 YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 SMART SM00382 26 213 2.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 SUPERFAMILY SSF52540 1 240 1.41E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 SUPERFAMILY SSF54631 269 306 5.63E-5 T 22-04-2016 YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 Gene3D G3DSA:3.40.50.300 1 235 5.0E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 Pfam PF00005 ABC transporter 17 163 4.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06850 699ff81f5932909e9b7fa693c101a4bf 312 PANTHER PTHR24220:SF434 3 296 4.4E-164 T 22-04-2016 YPTB_RS04935 7a614f4d224b88413122774aa74336d2 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.684 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS04935 7a614f4d224b88413122774aa74336d2 413 PANTHER PTHR30578:SF1 3 413 7.2E-270 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS04935 7a614f4d224b88413122774aa74336d2 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 6.5E-195 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS04935 7a614f4d224b88413122774aa74336d2 413 PANTHER PTHR30578 3 413 7.2E-270 T 22-04-2016 YPTB_RS04935 7a614f4d224b88413122774aa74336d2 413 Pfam PF03116 NQR2, RnfD, RnfE family 43 405 2.7E-107 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 YPTB_RS04935 7a614f4d224b88413122774aa74336d2 413 PIRSF PIRSF016055 1 413 2.4E-198 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS11810 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 PANTHER PTHR36118 1 209 4.7E-83 T 22-04-2016 YPTB_RS11810 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 1.3E-67 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YPTB_RS11810 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 PANTHER PTHR36118:SF1 1 209 4.7E-83 T 22-04-2016 YPTB_RS11810 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 PIRSF PIRSF006091 1 203 1.0E-71 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YPTB_RS11810 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 Pfam PF04205 FMN-binding domain 100 189 1.1E-17 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPTB_RS11810 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 SMART SM00900 100 192 8.5E-35 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPTB_RS11810 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.87 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 SMART SM00421 146 203 1.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 SUPERFAMILY SSF52172 2 128 6.55E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 SUPERFAMILY SSF46894 142 208 1.05E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 Pfam PF00072 Response regulator receiver domain 6 116 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 PANTHER PTHR26402:SF590 3 210 3.5E-151 T 22-04-2016 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 PANTHER PTHR26402 3 210 3.5E-151 T 22-04-2016 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 SMART SM00448 3 116 1.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 9.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 Gene3D G3DSA:1.10.10.10 151 208 9.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01850 9a3366c0c642547bd94fbaf1044b7a3b 210 Gene3D G3DSA:3.40.50.2300 2 150 5.4E-34 T 22-04-2016 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 Gene3D G3DSA:3.20.20.70 1 293 2.2E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 SMART SM01130 1 291 3.6E-144 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 PANTHER PTHR12128 1 293 2.9E-147 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 1.5E-118 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 SUPERFAMILY SSF51569 2 291 1.47E-98 T 22-04-2016 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 PANTHER PTHR12128:SF34 1 293 2.9E-147 T 22-04-2016 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 PIRSF PIRSF001365 1 293 1.3E-94 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 1.7E-113 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS15075 c3a38a634329cfd776a24806a9e155b9 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 64.834 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 Gene3D G3DSA:2.60.40.1070 133 224 5.4E-25 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 SUPERFAMILY SSF49584 123 223 1.57E-18 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 PANTHER PTHR30251 1 228 3.6E-120 T 22-04-2016 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 6 129 6.7E-44 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 SUPERFAMILY SSF49354 2 129 7.33E-41 T 22-04-2016 IPR008962 PapD-like YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 82 99 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 Gene3D G3DSA:2.60.40.360 6 129 5.0E-43 T 22-04-2016 IPR008962 PapD-like YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 PANTHER PTHR30251:SF2 1 228 3.6E-120 T 22-04-2016 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 151 220 1.1E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 PRINTS PR00969 Pili chaperone signature 6 15 1.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 PRINTS PR00969 Pili chaperone signature 146 161 1.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 PRINTS PR00969 Pili chaperone signature 111 126 1.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 PRINTS PR00969 Pili chaperone signature 55 76 1.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS12915 441b3fdc3c62b9e1842c5a2ba1737b3d 228 PRINTS PR00969 Pili chaperone signature 83 100 1.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS01755 5acf6fe22513978049f2a1098697eb3e 196 Gene3D G3DSA:1.20.1590.10 1 194 2.8E-87 T 22-04-2016 IPR023381 YP001051499.1-like domain YPTB_RS01755 5acf6fe22513978049f2a1098697eb3e 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 5.3E-77 T 22-04-2016 IPR007338 Protein of unknown function DUF416 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 SUPERFAMILY SSF47757 18 94 5.75E-25 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PIRSF PIRSF000410 10 288 6.1E-99 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PANTHER PTHR24422:SF13 18 290 7.2E-160 T 22-04-2016 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 80 1.9E-19 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPTB_RS13055 e95a60b46db058749311a4b194388089 290 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 282 2.7E-58 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPTB_RS13055 e95a60b46db058749311a4b194388089 290 Gene3D G3DSA:3.40.50.150 94 284 7.6E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS13055 e95a60b46db058749311a4b194388089 290 Gene3D G3DSA:1.10.155.10 16 93 6.0E-33 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 PANTHER PTHR24422 18 290 7.2E-160 T 22-04-2016 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 SMART SM00138 27 287 4.6E-114 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPTB_RS13055 e95a60b46db058749311a4b194388089 290 SUPERFAMILY SSF53335 95 284 8.36E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS19035 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:3.10.450.50 24 68 3.3E-16 T 22-04-2016 IPR032710 NTF2-like domain YPTB_RS19035 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:3.10.450.50 112 170 3.3E-16 T 22-04-2016 IPR032710 NTF2-like domain YPTB_RS19035 5f5ddb2b6235c3518023b5c37c15cf47 207 Pfam PF05494 MlaC protein 31 195 1.1E-51 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPTB_RS19035 5f5ddb2b6235c3518023b5c37c15cf47 207 PANTHER PTHR36573 1 207 1.0E-80 T 22-04-2016 YPTB_RS19035 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:1.10.10.640 69 109 1.2E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical YPTB_RS19035 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:1.10.10.640 171 201 1.2E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical YPTB_RS19035 5f5ddb2b6235c3518023b5c37c15cf47 207 PIRSF PIRSF004649 1 207 2.2E-58 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799 150 354 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799 892 968 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799 399 694 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799 799 840 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 Gene3D G3DSA:3.40.50.300 154 322 6.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 Gene3D G3DSA:3.40.50.300 483 623 4.0E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 4.3E-14 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799:SF610 150 354 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799:SF610 892 968 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799:SF610 399 694 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 PANTHER PTHR10799:SF610 799 840 2.6E-267 T 22-04-2016 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 2.9E-19 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 71.021 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 6.9E-157 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 SUPERFAMILY SSF52540 125 377 2.48E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 SMART SM00490 517 601 4.9E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 SMART SM00487 150 342 2.3E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 SUPERFAMILY SSF52540 480 644 1.11E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03680 38b7434124b1e6a4938bf6050754426d 968 SUPERFAMILY SSF52540 273 337 1.11E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15880 9c1779582ec32a8ca804577ea9f63ea5 109 Pfam PF06411 HdeA/HdeB family 10 94 8.5E-24 T 22-04-2016 IPR010486 HNS-dependent expression A/B YPTB_RS15880 9c1779582ec32a8ca804577ea9f63ea5 109 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 34 102 2.0E-35 T 22-04-2016 YPTB_RS15880 9c1779582ec32a8ca804577ea9f63ea5 109 Gene3D G3DSA:1.10.890.10 30 95 7.9E-12 T 22-04-2016 IPR010486 HNS-dependent expression A/B YPTB_RS15880 9c1779582ec32a8ca804577ea9f63ea5 109 SUPERFAMILY SSF47752 33 94 3.14E-5 T 22-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 YPTB_RS15880 9c1779582ec32a8ca804577ea9f63ea5 109 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 101 28.387 T 22-04-2016 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 YPTB_RS05605 c183d8e22ff1d9815d0a6f85e69de28a 563 PANTHER PTHR16254 1 550 0.0 T 22-04-2016 YPTB_RS05605 c183d8e22ff1d9815d0a6f85e69de28a 563 Pfam PF02254 TrkA-N domain 420 534 6.7E-21 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPTB_RS05605 c183d8e22ff1d9815d0a6f85e69de28a 563 SUPERFAMILY SSF51735 418 547 1.14E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05605 c183d8e22ff1d9815d0a6f85e69de28a 563 PANTHER PTHR16254:SF17 1 550 0.0 T 22-04-2016 YPTB_RS05605 c183d8e22ff1d9815d0a6f85e69de28a 563 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 9.0E-81 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YPTB_RS05605 c183d8e22ff1d9815d0a6f85e69de28a 563 Gene3D G3DSA:3.40.50.720 413 547 2.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05605 c183d8e22ff1d9815d0a6f85e69de28a 563 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 9.9E-80 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YPTB_RS18040 200f5ef2f38bb183af95f73c5cf49128 243 SUPERFAMILY SSF117143 77 178 9.55E-10 T 22-04-2016 YPTB_RS18040 200f5ef2f38bb183af95f73c5cf49128 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 220 7.8E-55 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 YPTB_RS18040 200f5ef2f38bb183af95f73c5cf49128 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 169 239 2.2E-15 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS18040 200f5ef2f38bb183af95f73c5cf49128 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 119 1.2E-26 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS18040 200f5ef2f38bb183af95f73c5cf49128 243 Pfam PF00460 Flagella basal body rod protein 5 35 7.9E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS18040 200f5ef2f38bb183af95f73c5cf49128 243 PANTHER PTHR30435 1 241 4.5E-68 T 22-04-2016 YPTB_RS18040 200f5ef2f38bb183af95f73c5cf49128 243 PANTHER PTHR30435:SF18 1 241 4.5E-68 T 22-04-2016 YPTB_RS12490 8a21d8ee9750037464e96024f13c3b04 365 PANTHER PTHR22893:SF14 1 365 6.8E-178 T 22-04-2016 YPTB_RS12490 8a21d8ee9750037464e96024f13c3b04 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 2.0E-92 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YPTB_RS12490 8a21d8ee9750037464e96024f13c3b04 365 SUPERFAMILY SSF51395 1 365 2.05E-124 T 22-04-2016 YPTB_RS12490 8a21d8ee9750037464e96024f13c3b04 365 PANTHER PTHR22893 1 365 6.8E-178 T 22-04-2016 YPTB_RS12490 8a21d8ee9750037464e96024f13c3b04 365 Gene3D G3DSA:3.20.20.70 4 364 3.2E-137 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS20610 6782cefae553d7a763269f61ac7cc2cd 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 2.3E-54 T 22-04-2016 IPR019598 Universal stress protein B YPTB_RS20610 6782cefae553d7a763269f61ac7cc2cd 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 37.029 T 22-04-2016 IPR019598 Universal stress protein B YPTB_RS17605 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565:SF1 3 46 0.0 T 22-04-2016 YPTB_RS17605 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565:SF1 64 516 0.0 T 22-04-2016 YPTB_RS17605 ef72e535226537eb14fea01dee1fc4d0 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 50 512 1.1E-203 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS17605 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565 3 46 0.0 T 22-04-2016 YPTB_RS17605 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565 64 516 0.0 T 22-04-2016 YPTB_RS17605 ef72e535226537eb14fea01dee1fc4d0 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 93 512 1.5E-170 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF02449 Beta-galactosidase 19 392 3.5E-159 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 PIRSF PIRSF001084 6 684 5.0E-249 T 22-04-2016 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF08533 Beta-galactosidase C-terminal domain 626 682 1.2E-15 T 22-04-2016 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 PANTHER PTHR36447 1 686 1.7E-284 T 22-04-2016 YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 SUPERFAMILY SSF51445 13 372 6.02E-119 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 Gene3D G3DSA:3.40.50.880 401 616 2.6E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF08532 Beta-galactosidase trimerisation domain 403 615 5.6E-79 T 22-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 PANTHER PTHR36447:SF1 1 686 1.7E-284 T 22-04-2016 YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 SUPERFAMILY SSF52317 400 615 5.04E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS16755 a692814ac45ff6bcfaf6acbbd6a62232 686 Gene3D G3DSA:3.20.20.80 16 395 6.2E-129 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS04205 9712d77b59a90746507504a1388a993c 189 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 80 90 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 YPTB_RS04205 9712d77b59a90746507504a1388a993c 189 PANTHER PTHR10003 29 189 5.1E-51 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 YPTB_RS04205 9712d77b59a90746507504a1388a993c 189 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 48 188 1.1E-29 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS04205 9712d77b59a90746507504a1388a993c 189 SUPERFAMILY SSF49329 38 189 7.85E-50 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS04205 9712d77b59a90746507504a1388a993c 189 Gene3D G3DSA:2.60.40.200 37 189 2.1E-47 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPTB_RS04205 9712d77b59a90746507504a1388a993c 189 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 177 188 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 YPTB_RS04205 9712d77b59a90746507504a1388a993c 189 PANTHER PTHR10003:SF40 29 189 5.1E-51 T 22-04-2016 YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 PANTHER PTHR30128 80 457 3.6E-59 T 22-04-2016 YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 Pfam PF00691 OmpA family 352 450 1.6E-18 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 86 293 2.2E-59 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 SUPERFAMILY SSF103088 341 456 1.06E-29 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 320 456 2.3E-51 T 22-04-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 Gene3D G3DSA:3.30.1330.60 330 456 1.2E-31 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 Pfam PF09850 Type VI secretion system protein DotU 86 289 9.1E-48 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS14420 428dfc7373b8ceb90ed5d550c42d3a9f 458 PANTHER PTHR30128:SF2 80 457 3.6E-59 T 22-04-2016 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 SUPERFAMILY SSF51735 1 147 2.96E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 SMART SM00859 3 122 3.3E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 PIRSF PIRSF000148 1 367 4.9E-69 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 SUPERFAMILY SSF55347 134 354 6.86E-79 T 22-04-2016 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 PANTHER PTHR10174:SF116 201 367 1.1E-161 T 22-04-2016 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 PANTHER PTHR10174:SF116 103 179 1.1E-161 T 22-04-2016 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.794 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 5.7E-23 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 8.0E-58 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 Gene3D G3DSA:3.40.50.720 1 142 1.3E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 Gene3D G3DSA:3.30.360.10 143 350 9.6E-77 T 22-04-2016 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 PANTHER PTHR10174 201 367 1.1E-161 T 22-04-2016 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 PANTHER PTHR10174 103 179 1.1E-161 T 22-04-2016 YPTB_RS20495 a38ea831a0c6c43978886824d643af81 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 2.9E-211 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS12425 d9d73f2f3a8fb224dd8350383e4f796a 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 5.0E-44 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD YPTB_RS12425 d9d73f2f3a8fb224dd8350383e4f796a 87 Pfam PF11656 YjbD family (DUF3811) 1 87 6.7E-39 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 SUPERFAMILY SSF143800 1 66 3.65E-26 T 22-04-2016 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 8.2E-33 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.3E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.3E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 PANTHER PTHR33280 1 66 2.8E-37 T 22-04-2016 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.069 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 Pfam PF01197 Ribosomal protein L31 1 64 3.5E-29 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00615 20b23a19f8ee5acc41d588eb597a09de 71 PANTHER PTHR33280:SF2 1 66 2.8E-37 T 22-04-2016 YPTB_RS18135 051f2b440c6cee44fae2a6c57690675d 257 Pfam PF01311 Bacterial export proteins, family 1 13 245 7.6E-56 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS18135 051f2b440c6cee44fae2a6c57690675d 257 PANTHER PTHR30065 1 254 5.3E-87 T 22-04-2016 YPTB_RS18135 051f2b440c6cee44fae2a6c57690675d 257 PANTHER PTHR30065:SF1 1 254 5.3E-87 T 22-04-2016 YPTB_RS18135 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS18135 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS18135 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS18135 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS02440 23d963fa0164d10f87d5624d2bc70888 156 SUPERFAMILY SSF52540 29 148 1.9E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02440 23d963fa0164d10f87d5624d2bc70888 156 PANTHER PTHR33540 1 156 3.6E-54 T 22-04-2016 YPTB_RS02440 23d963fa0164d10f87d5624d2bc70888 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 5.8E-51 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YPTB_RS02440 23d963fa0164d10f87d5624d2bc70888 156 Gene3D G3DSA:3.40.50.300 3 151 1.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02440 23d963fa0164d10f87d5624d2bc70888 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 4.8E-41 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 Gene3D G3DSA:3.40.47.10 2 270 5.6E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 PANTHER PTHR11712:SF273 1 424 1.7E-180 T 22-04-2016 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 420 3.7E-165 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 SUPERFAMILY SSF53901 4 262 5.51E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 PIRSF PIRSF000447 1 424 3.4E-162 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 257 2.3E-57 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 SMART SM00825 Beta-ketoacyl synthase 6 424 1.4E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 378 7.6E-36 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 Gene3D G3DSA:3.40.47.10 274 422 1.4E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 SUPERFAMILY SSF53901 226 422 3.6E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 PANTHER PTHR11712 1 424 1.7E-180 T 22-04-2016 YPTB_RS07990 8b453002cfd49c64db8b69f2974fc53c 424 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPTB_RS18065 3b02054f4e032a2d31cd3b041eb844b8 282 SMART SM00858 153 215 1.3E-9 T 22-04-2016 IPR013974 SAF domain YPTB_RS18065 3b02054f4e032a2d31cd3b041eb844b8 282 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 141 276 1.0E-39 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTB_RS18065 3b02054f4e032a2d31cd3b041eb844b8 282 PANTHER PTHR36307 72 282 5.8E-54 T 22-04-2016 YPTB_RS18065 3b02054f4e032a2d31cd3b041eb844b8 282 Pfam PF13144 Chaperone for flagella basal body P-ring formation 74 276 4.1E-55 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTB_RS00705 d4008b5b10e516b4d6b672c03c271f8b 267 PANTHER PTHR33446:SF2 12 266 6.3E-50 T 22-04-2016 YPTB_RS00705 d4008b5b10e516b4d6b672c03c271f8b 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 265 1.7E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPTB_RS00705 d4008b5b10e516b4d6b672c03c271f8b 267 Gene3D G3DSA:3.30.1150.10 153 265 1.3E-24 T 22-04-2016 YPTB_RS00705 d4008b5b10e516b4d6b672c03c271f8b 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 186 264 4.0E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPTB_RS00705 d4008b5b10e516b4d6b672c03c271f8b 267 PANTHER PTHR33446 12 266 6.3E-50 T 22-04-2016 YPTB_RS00705 d4008b5b10e516b4d6b672c03c271f8b 267 SUPERFAMILY SSF74653 165 265 1.83E-22 T 22-04-2016 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 Gene3D G3DSA:3.40.50.2300 62 173 3.7E-39 T 22-04-2016 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 SUPERFAMILY SSF47413 5 63 8.94E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 PANTHER PTHR30146:SF2 4 327 5.5E-191 T 22-04-2016 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 PANTHER PTHR30146 4 327 5.5E-191 T 22-04-2016 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 SUPERFAMILY SSF53822 63 316 3.93E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.5E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 Gene3D G3DSA:1.10.260.40 4 59 3.5E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 SMART SM00354 5 75 3.6E-24 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 Gene3D G3DSA:3.40.50.2300 174 330 5.8E-42 T 22-04-2016 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20545 890382e126db493e803af94aa6784dc6 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 306 5.7E-33 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB_RS04515 e03980d39caf852bdcf3e64ca1e34b77 374 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 339 1.8E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS04515 e03980d39caf852bdcf3e64ca1e34b77 374 PANTHER PTHR32196 1 363 4.6E-144 T 22-04-2016 YPTB_RS04515 e03980d39caf852bdcf3e64ca1e34b77 374 PANTHER PTHR32196:SF21 1 363 4.6E-144 T 22-04-2016 YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 Pfam PF11967 Recombination protein O N terminal 4 76 1.1E-22 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 Gene3D G3DSA:2.40.50.140 6 75 4.6E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 SUPERFAMILY SSF50249 4 75 3.08E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.902 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 Pfam PF02565 Recombination protein O C terminal 83 226 7.1E-24 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 2.3E-38 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 PANTHER PTHR33991 1 241 3.3E-69 T 22-04-2016 YPTB_RS15610 d3861ff1b8f3e7303be808201d305a55 241 SUPERFAMILY SSF57863 86 173 5.75E-9 T 22-04-2016 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 1.1E-78 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 PANTHER PTHR11557 1 310 6.2E-171 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 SUPERFAMILY SSF54782 220 309 7.85E-29 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 Gene3D G3DSA:3.30.160.40 221 305 2.0E-29 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 Gene3D G3DSA:3.40.190.10 111 199 1.1E-39 T 22-04-2016 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 Gene3D G3DSA:3.40.190.10 3 110 1.1E-48 T 22-04-2016 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 PIRSF PIRSF001438 1 311 1.7E-122 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 9.2E-114 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.61 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.7E-22 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 SUPERFAMILY SSF53850 5 219 4.55E-86 T 22-04-2016 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01120 0d22dec615e3d231fd47dd10da50e40a 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS06700 0c3ea767f739636cbc898825c501c49c 368 Pfam PF12698 ABC-2 family transporter protein 25 355 6.4E-50 T 22-04-2016 YPTB_RS06700 0c3ea767f739636cbc898825c501c49c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS06700 0c3ea767f739636cbc898825c501c49c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS06700 0c3ea767f739636cbc898825c501c49c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS06700 0c3ea767f739636cbc898825c501c49c 368 PANTHER PTHR30294 1 367 1.1E-262 T 22-04-2016 YPTB_RS06700 0c3ea767f739636cbc898825c501c49c 368 PANTHER PTHR30294:SF15 1 367 1.1E-262 T 22-04-2016 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 PANTHER PTHR11019 1 284 9.8E-123 T 22-04-2016 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 3.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 3.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 Pfam PF12833 Helix-turn-helix domain 204 278 2.5E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 Gene3D G3DSA:2.60.120.280 24 162 2.5E-18 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 SMART SM00342 193 276 3.6E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 Gene3D G3DSA:1.10.10.60 179 229 4.5E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 Pfam PF02311 AraC-like ligand binding domain 30 157 1.7E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 Gene3D G3DSA:1.10.10.60 230 281 6.9E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 SUPERFAMILY SSF46689 229 280 9.86E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 PANTHER PTHR11019:SF81 1 284 9.8E-123 T 22-04-2016 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 SUPERFAMILY SSF51215 15 162 6.8E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS19520 3bcef87da5efbea9c969009b4d1ece0e 288 SUPERFAMILY SSF46689 177 227 2.96E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS19500 d07031d8dd32bb650760387c90160c64 193 Pfam PF03358 NADPH-dependent FMN reductase 1 139 4.9E-32 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YPTB_RS19500 d07031d8dd32bb650760387c90160c64 193 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 169 3.5E-71 T 22-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 YPTB_RS19500 d07031d8dd32bb650760387c90160c64 193 PANTHER PTHR30543:SF1 1 190 5.0E-64 T 22-04-2016 YPTB_RS19500 d07031d8dd32bb650760387c90160c64 193 Gene3D G3DSA:3.40.50.360 1 176 1.8E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS19500 d07031d8dd32bb650760387c90160c64 193 PANTHER PTHR30543 1 190 5.0E-64 T 22-04-2016 YPTB_RS19500 d07031d8dd32bb650760387c90160c64 193 SUPERFAMILY SSF52218 1 168 6.68E-32 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.76E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.76E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.76E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.76E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.76E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.76E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PANTHER PTHR24322 5 182 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 Gene3D G3DSA:3.40.50.720 4 241 7.7E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 SUPERFAMILY SSF51735 3 243 1.34E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.12E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.12E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.12E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS08130 57b47e2f7aaf04986cab7cc28d2ff21c 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 7 241 3.1E-54 T 22-04-2016 YPTB_RS01200 3831f2924869941e764b49e39660f68f 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 7.0E-99 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 YPTB_RS01200 3831f2924869941e764b49e39660f68f 296 SUPERFAMILY SSF103481 42 146 1.96E-16 T 22-04-2016 YPTB_RS01200 3831f2924869941e764b49e39660f68f 296 Pfam PF00892 EamA-like transporter family 9 142 2.4E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS01200 3831f2924869941e764b49e39660f68f 296 SUPERFAMILY SSF103481 190 285 1.44E-6 T 22-04-2016 YPTB_RS01200 3831f2924869941e764b49e39660f68f 296 PANTHER PTHR22911:SF41 1 296 4.0E-161 T 22-04-2016 YPTB_RS01200 3831f2924869941e764b49e39660f68f 296 PANTHER PTHR22911 1 296 4.0E-161 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 SMART SM00382 94 248 1.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 Gene3D G3DSA:3.40.50.300 62 280 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 2.4E-232 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF52540 71 290 4.59E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.2E-93 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.2E-93 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.2E-93 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.2E-93 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.2E-93 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.2E-93 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.2E-93 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 Pfam PF13481 AAA domain 88 225 2.0E-13 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 4.2E-9 T 22-04-2016 YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF54211 258 272 2.35E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF54211 306 458 2.35E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 Gene3D G3DSA:3.30.230.10 288 457 6.8E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS03320 530293d5077ef74ecf579c674a791268 460 PANTHER PTHR32472 1 457 2.1E-228 T 22-04-2016 YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 SUPERFAMILY SSF51126 430 867 2.13E-27 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 Pfam PF03212 Pertactin 761 861 4.6E-13 T 22-04-2016 IPR004899 Pertactin, central region YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 SMART SM00869 910 1160 1.6E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 Pfam PF03797 Autotransporter beta-domain 911 1149 4.8E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 SUPERFAMILY SSF103515 881 1171 1.01E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 PANTHER PTHR35037 44 1171 8.8E-96 T 22-04-2016 YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 775 1171 2.3E-89 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 Gene3D G3DSA:2.40.128.130 870 1171 8.0E-67 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 Gene3D G3DSA:2.160.20.20 439 860 5.8E-37 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS15420 8c05460b832a5c8ce1b876e83728cc2f 1171 PANTHER PTHR35037:SF1 44 1171 8.8E-96 T 22-04-2016 YPTB_RS18745 256f536e59d5ec09e81c7ed34c7c6fff 213 Gene3D G3DSA:2.60.60.30 19 205 2.0E-58 T 22-04-2016 YPTB_RS18745 256f536e59d5ec09e81c7ed34c7c6fff 213 PANTHER PTHR32097 1 212 1.3E-66 T 22-04-2016 YPTB_RS18745 256f536e59d5ec09e81c7ed34c7c6fff 213 Pfam PF02342 TerD domain 1 203 3.1E-53 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPTB_RS03345 2419378a656179baf54d6e978c297707 433 PANTHER PTHR10799:SF774 45 193 5.9E-52 T 22-04-2016 YPTB_RS03345 2419378a656179baf54d6e978c297707 433 PANTHER PTHR10799:SF774 291 414 5.9E-52 T 22-04-2016 YPTB_RS03345 2419378a656179baf54d6e978c297707 433 SMART SM00267 248 422 6.2E-65 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS03345 2419378a656179baf54d6e978c297707 433 SUPERFAMILY SSF55073 264 418 5.18E-47 T 22-04-2016 IPR029787 Nucleotide cyclase YPTB_RS03345 2419378a656179baf54d6e978c297707 433 Gene3D G3DSA:3.30.70.270 261 421 7.9E-53 T 22-04-2016 YPTB_RS03345 2419378a656179baf54d6e978c297707 433 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 256 416 1.7E-45 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS03345 2419378a656179baf54d6e978c297707 433 PANTHER PTHR10799 45 193 5.9E-52 T 22-04-2016 YPTB_RS03345 2419378a656179baf54d6e978c297707 433 PANTHER PTHR10799 291 414 5.9E-52 T 22-04-2016 YPTB_RS03345 2419378a656179baf54d6e978c297707 433 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 414 9.2E-49 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS03345 2419378a656179baf54d6e978c297707 433 Pfam PF17152 Periplasmic sensor domain 55 156 1.5E-30 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 SUPERFAMILY SSF51735 316 495 4.98E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 PANTHER PTHR23309:SF18 8 715 0.0 T 22-04-2016 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.211 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 2.9E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Gene3D G3DSA:3.40.50.720 311 497 6.5E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 494 1.5E-59 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 7.9E-27 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 PANTHER PTHR23309 8 715 0.0 T 22-04-2016 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 SUPERFAMILY SSF48179 622 714 1.62E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 SUPERFAMILY SSF48179 495 611 7.82E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Gene3D G3DSA:3.90.226.10 4 206 1.3E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Gene3D G3DSA:1.10.1040.10 632 711 9.2E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 Gene3D G3DSA:1.10.1040.10 498 592 1.7E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS01550 aa99d7a770c54698a48f54b7de940cbb 729 SUPERFAMILY SSF52096 2 303 3.7E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 Gene3D G3DSA:3.30.420.40 11 260 7.8E-56 T 22-04-2016 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 467 8.9E-20 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 SUPERFAMILY SSF53067 262 512 3.06E-48 T 22-04-2016 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 6.9E-47 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 SUPERFAMILY SSF53067 13 263 1.35E-57 T 22-04-2016 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 Gene3D G3DSA:3.30.420.40 262 516 4.9E-40 T 22-04-2016 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 PANTHER PTHR10196:SF70 1 524 0.0 T 22-04-2016 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 PANTHER PTHR10196 1 524 0.0 T 22-04-2016 YPTB_RS03140 9f18d59482e151a3e6a47f666be96a24 530 PIRSF PIRSF000538 11 518 1.1E-113 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS15645 4552ec45de98101f8681438f0c62fbfc 318 PANTHER PTHR38782 2 318 2.6E-143 T 22-04-2016 YPTB_RS15645 4552ec45de98101f8681438f0c62fbfc 318 Pfam PF17188 MucB/RseB C-terminal domain 219 312 1.2E-28 T 22-04-2016 IPR033436 MucB/RseB, C-terminal YPTB_RS15645 4552ec45de98101f8681438f0c62fbfc 318 Gene3D G3DSA:2.50.20.10 122 185 9.3E-9 T 22-04-2016 YPTB_RS15645 4552ec45de98101f8681438f0c62fbfc 318 PIRSF PIRSF005427 1 318 6.6E-88 T 22-04-2016 IPR005588 MucB/RseB YPTB_RS15645 4552ec45de98101f8681438f0c62fbfc 318 PANTHER PTHR38782:SF1 2 318 2.6E-143 T 22-04-2016 YPTB_RS15645 4552ec45de98101f8681438f0c62fbfc 318 Pfam PF03888 MucB/RseB N-terminal domain 28 196 1.3E-60 T 22-04-2016 IPR033434 MucB/RseB, N-terminal YPTB_RS02500 7745485a985630edd20fe351112049f0 246 SUPERFAMILY SSF55315 2 75 4.94E-20 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPTB_RS02500 7745485a985630edd20fe351112049f0 246 Gene3D G3DSA:3.30.1330.30 1 75 1.2E-26 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPTB_RS02500 7745485a985630edd20fe351112049f0 246 Gene3D G3DSA:3.40.1280.10 93 243 5.8E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS02500 7745485a985630edd20fe351112049f0 246 SUPERFAMILY SSF75217 69 243 5.62E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS02500 7745485a985630edd20fe351112049f0 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 6.4E-90 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 YPTB_RS02500 7745485a985630edd20fe351112049f0 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 2.8E-19 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPTB_RS02500 7745485a985630edd20fe351112049f0 246 SMART SM00967 4 80 1.1E-21 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPTB_RS02500 7745485a985630edd20fe351112049f0 246 PANTHER PTHR12029 3 243 2.5E-81 T 22-04-2016 YPTB_RS02500 7745485a985630edd20fe351112049f0 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.348 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPTB_RS02500 7745485a985630edd20fe351112049f0 246 Pfam PF00588 SpoU rRNA Methylase family 96 236 9.0E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPTB_RS15765 a3b3ccb24cc1bedbf4174b71a16c659e 562 PANTHER PTHR30607 2 562 0.0 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPTB_RS15765 a3b3ccb24cc1bedbf4174b71a16c659e 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 3.3E-262 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPTB_RS15765 a3b3ccb24cc1bedbf4174b71a16c659e 562 PIRSF PIRSF001294 1 560 2.1E-239 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPTB_RS15765 a3b3ccb24cc1bedbf4174b71a16c659e 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.334 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPTB_RS15765 a3b3ccb24cc1bedbf4174b71a16c659e 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 9.1E-242 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPTB_RS12945 1637fd4a35226ed2606a8fe77d9ac61e 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 6 405 4.2E-172 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 YPTB_RS12945 1637fd4a35226ed2606a8fe77d9ac61e 415 Pfam PF04403 Paraquat-inducible protein A 53 204 1.4E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPTB_RS12945 1637fd4a35226ed2606a8fe77d9ac61e 415 Pfam PF04403 Paraquat-inducible protein A 250 406 1.1E-46 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPTB_RS12945 1637fd4a35226ed2606a8fe77d9ac61e 415 PANTHER PTHR30462:SF1 1 415 2.2E-269 T 22-04-2016 YPTB_RS12945 1637fd4a35226ed2606a8fe77d9ac61e 415 PANTHER PTHR30462 1 415 2.2E-269 T 22-04-2016 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF05192 MutS domain III 272 559 9.4E-39 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 848 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 PANTHER PTHR11361 1 850 0.0 T 22-04-2016 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:1.10.1420.10 319 477 1.3E-53 T 22-04-2016 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF05190 MutS family domain IV 428 517 2.4E-28 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:3.40.1170.10 4 123 2.9E-50 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF00488 MutS domain V 610 797 3.1E-88 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF48334 270 566 6.41E-90 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF01624 MutS domain I 11 122 8.7E-41 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 SMART SM00533 286 591 6.3E-105 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF53150 117 269 8.76E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF55271 5 116 4.45E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 PANTHER PTHR11361:SF86 1 850 0.0 T 22-04-2016 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 SMART SM00534 607 794 2.7E-122 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF52540 567 798 4.83E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF05188 MutS domain II 131 256 4.4E-34 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 843 25.249 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:3.40.50.300 568 797 1.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04320 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:3.30.420.110 129 258 1.2E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YPTB_RS12625 7e35f613360c7915d9abdf71add3c13d 138 SUPERFAMILY SSF54637 20 136 7.47E-31 T 22-04-2016 IPR029069 HotDog domain YPTB_RS12625 7e35f613360c7915d9abdf71add3c13d 138 PANTHER PTHR12418 3 138 2.4E-54 T 22-04-2016 YPTB_RS12625 7e35f613360c7915d9abdf71add3c13d 138 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 42.445 T 22-04-2016 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS12625 7e35f613360c7915d9abdf71add3c13d 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 8.2E-46 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain YPTB_RS12625 7e35f613360c7915d9abdf71add3c13d 138 Pfam PF03061 Thioesterase superfamily 50 127 2.2E-16 T 22-04-2016 IPR006683 Thioesterase domain YPTB_RS12625 7e35f613360c7915d9abdf71add3c13d 138 PANTHER PTHR12418:SF33 3 138 2.4E-54 T 22-04-2016 YPTB_RS12625 7e35f613360c7915d9abdf71add3c13d 138 Gene3D G3DSA:3.10.129.10 2 137 5.0E-51 T 22-04-2016 IPR029069 HotDog domain YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 SUPERFAMILY SSF51230 1 93 4.06E-23 T 22-04-2016 IPR011053 Single hybrid motif YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Gene3D G3DSA:3.30.559.10 283 524 2.1E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 SUPERFAMILY SSF47005 215 260 4.32E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Pfam PF00364 Biotin-requiring enzyme 4 73 1.3E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Pfam PF00364 Biotin-requiring enzyme 106 175 2.6E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 SUPERFAMILY SSF51230 105 194 7.98E-23 T 22-04-2016 IPR011053 Single hybrid motif YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 PANTHER PTHR23151:SF68 21 524 8.7E-278 T 22-04-2016 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 SUPERFAMILY SSF52777 282 523 2.18E-80 T 22-04-2016 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 293 523 2.6E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Pfam PF02817 e3 binding domain 221 256 1.0E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 PANTHER PTHR23151 21 524 8.7E-278 T 22-04-2016 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Gene3D G3DSA:2.40.50.100 103 194 6.0E-21 T 22-04-2016 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Gene3D G3DSA:4.10.320.10 214 261 9.3E-22 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 Gene3D G3DSA:2.40.50.100 3 78 4.0E-22 T 22-04-2016 YPTB_RS03995 be680fce57d1a4d3c82a07380ffcee4a 524 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 78 524 2.7E-222 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 YPTB_RS03615 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 8 610 1.7E-137 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS03615 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 PANTHER PTHR35370:SF3 3 612 0.0 T 22-04-2016 YPTB_RS03615 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 609 2.5E-109 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS03615 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 PIRSF PIRSF028304 2 614 1.1E-179 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS03615 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 PANTHER PTHR35370 3 612 0.0 T 22-04-2016 YPTB_RS14900 6d1e884795a4ec4257f87198d5c7f1ae 60 Gene3D G3DSA:3.40.630.30 1 48 4.9E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS14900 6d1e884795a4ec4257f87198d5c7f1ae 60 SUPERFAMILY SSF55729 1 50 3.3E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS14900 6d1e884795a4ec4257f87198d5c7f1ae 60 Pfam PF00583 Acetyltransferase (GNAT) family 1 43 1.4E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS03660 0cfa0f9d11e853e46f8efd4be4e4addd 451 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 444 7.1E-118 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS03660 0cfa0f9d11e853e46f8efd4be4e4addd 451 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 2.1E-138 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS03660 0cfa0f9d11e853e46f8efd4be4e4addd 451 PANTHER PTHR35566 1 451 8.0E-195 T 22-04-2016 YPTB_RS03660 0cfa0f9d11e853e46f8efd4be4e4addd 451 PANTHER PTHR35566:SF1 1 451 8.0E-195 T 22-04-2016 YPTB_RS18105 765339d77fde5183c39ba5b77b2ffdc9 126 Pfam PF02049 Flagellar hook-basal body complex protein FliE 50 125 2.5E-21 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS18105 765339d77fde5183c39ba5b77b2ffdc9 126 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 52 124 2.8E-13 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS18105 765339d77fde5183c39ba5b77b2ffdc9 126 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 126 13.043 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS18105 765339d77fde5183c39ba5b77b2ffdc9 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 56 72 2.9E-8 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS18105 765339d77fde5183c39ba5b77b2ffdc9 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 106 2.9E-8 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS18105 765339d77fde5183c39ba5b77b2ffdc9 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 111 124 2.9E-8 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS09420 d341688f425f949f0c9dd759e84bc789 466 PANTHER PTHR30288 2 466 1.4E-106 T 22-04-2016 YPTB_RS09420 d341688f425f949f0c9dd759e84bc789 466 Pfam PF07196 Flagellin hook IN motif 128 185 2.3E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 YPTB_RS09420 d341688f425f949f0c9dd759e84bc789 466 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 8.2E-22 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 YPTB_RS09420 d341688f425f949f0c9dd759e84bc789 466 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 455 3.4E-63 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 YPTB_RS09420 d341688f425f949f0c9dd759e84bc789 466 PANTHER PTHR30288:SF0 2 466 1.4E-106 T 22-04-2016 YPTB_RS13170 46fe5184fed7d11e5a9edd4a5aba22e9 441 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site YPTB_RS13170 46fe5184fed7d11e5a9edd4a5aba22e9 441 SUPERFAMILY SSF53254 31 438 2.35E-68 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS13170 46fe5184fed7d11e5a9edd4a5aba22e9 441 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 35 381 9.0E-20 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 YPTB_RS13170 46fe5184fed7d11e5a9edd4a5aba22e9 441 Gene3D G3DSA:3.40.50.1240 146 286 2.3E-42 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS13170 46fe5184fed7d11e5a9edd4a5aba22e9 441 Gene3D G3DSA:3.40.50.1240 31 145 6.8E-72 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS13170 46fe5184fed7d11e5a9edd4a5aba22e9 441 Gene3D G3DSA:3.40.50.1240 289 441 6.8E-72 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS13170 46fe5184fed7d11e5a9edd4a5aba22e9 441 PANTHER PTHR41972 2 441 1.5E-214 T 22-04-2016 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 PANTHER PTHR26402 1 218 3.7E-165 T 22-04-2016 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 SMART SM00448 1 112 5.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 Gene3D G3DSA:1.10.10.10 126 218 1.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 Pfam PF00072 Response regulator receiver domain 4 113 2.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.9E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 SMART SM00862 145 216 2.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 Gene3D G3DSA:3.40.50.2300 1 125 6.3E-37 T 22-04-2016 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 PANTHER PTHR26402:SF595 1 218 3.7E-165 T 22-04-2016 YPTB_RS02685 c02094da221709d9151e961bfd9fac8a 220 SUPERFAMILY SSF52172 1 175 2.2E-39 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 SMART SM00354 1 71 1.1E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 PANTHER PTHR30146:SF48 1 299 1.1E-112 T 22-04-2016 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.1E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.1E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 Pfam PF13377 Periplasmic binding protein-like domain 169 299 5.1E-29 T 22-04-2016 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 SUPERFAMILY SSF47413 2 56 4.02E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 Gene3D G3DSA:1.10.260.40 2 58 1.6E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 SUPERFAMILY SSF53822 61 299 1.11E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 Gene3D G3DSA:3.40.50.2300 59 168 7.3E-35 T 22-04-2016 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.4E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 PANTHER PTHR30146 1 299 1.1E-112 T 22-04-2016 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 Gene3D G3DSA:3.40.50.2300 169 299 2.8E-48 T 22-04-2016 YPTB_RS12020 ca9828a1f01f9931bdb6fb1578fc2261 299 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS00645 43db8edda69e661af5c26b3d5b5e09e0 294 SUPERFAMILY SSF51730 22 293 4.71E-96 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPTB_RS00645 43db8edda69e661af5c26b3d5b5e09e0 294 PANTHER PTHR21091 149 280 2.8E-45 T 22-04-2016 YPTB_RS00645 43db8edda69e661af5c26b3d5b5e09e0 294 Gene3D G3DSA:3.20.20.220 12 293 4.0E-106 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPTB_RS00645 43db8edda69e661af5c26b3d5b5e09e0 294 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 7.8E-109 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YPTB_RS00645 43db8edda69e661af5c26b3d5b5e09e0 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.0E-103 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YPTB_RS19620 bd87f8b12b9ccd5d0cccd542b8931d8c 265 Pfam PF02954 Bacterial regulatory protein, Fis family 221 261 2.4E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS19620 bd87f8b12b9ccd5d0cccd542b8931d8c 265 Gene3D G3DSA:1.10.10.60 210 261 2.6E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS19620 bd87f8b12b9ccd5d0cccd542b8931d8c 265 SUPERFAMILY SSF46689 203 261 7.62E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 Gene3D G3DSA:3.40.50.700 52 179 2.6E-31 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 PANTHER PTHR11995 2 221 4.5E-140 T 22-04-2016 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 SUPERFAMILY SSF56770 43 190 5.1E-64 T 22-04-2016 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 41.895 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 PANTHER PTHR11995:SF14 2 221 4.5E-140 T 22-04-2016 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 183 9.4E-69 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YPTB_RS14030 2df207d132bf2e6dc2b11adf3f1bac31 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 175 5.1E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YPTB_RS14445 6bdef33c6aa0d5b1946e5f96669a913f 174 PANTHER PTHR35850 2 172 1.2E-109 T 22-04-2016 YPTB_RS14445 6bdef33c6aa0d5b1946e5f96669a913f 174 PANTHER PTHR35850:SF1 2 172 1.2E-109 T 22-04-2016 YPTB_RS14445 6bdef33c6aa0d5b1946e5f96669a913f 174 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 2.6E-59 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS14445 6bdef33c6aa0d5b1946e5f96669a913f 174 PIRSF PIRSF028301 2 174 6.1E-61 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS14445 6bdef33c6aa0d5b1946e5f96669a913f 174 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 1.5E-57 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS04235 99ef893fbd44f0a2c54fbfe18291b61f 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 1.2E-28 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system YPTB_RS04235 99ef893fbd44f0a2c54fbfe18291b61f 135 Gene3D G3DSA:1.10.1220.10 95 133 5.9E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPTB_RS04235 99ef893fbd44f0a2c54fbfe18291b61f 135 SUPERFAMILY SSF143100 1 61 8.5E-14 T 22-04-2016 YPTB_RS04235 99ef893fbd44f0a2c54fbfe18291b61f 135 PANTHER PTHR34873 1 135 1.0E-68 T 22-04-2016 YPTB_RS04235 99ef893fbd44f0a2c54fbfe18291b61f 135 PANTHER PTHR34873:SF2 1 135 1.0E-68 T 22-04-2016 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 PANTHER PTHR11751 131 155 4.9E-22 T 22-04-2016 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 PANTHER PTHR11751 16 84 4.9E-22 T 22-04-2016 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 Gene3D G3DSA:1.10.10.10 9 76 1.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 Gene3D G3DSA:3.40.1410.10 77 246 6.0E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 PANTHER PTHR11751:SF333 131 155 4.9E-22 T 22-04-2016 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 PANTHER PTHR11751:SF333 16 84 4.9E-22 T 22-04-2016 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 SMART SM00345 23 82 1.4E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 SUPERFAMILY SSF64288 70 246 1.55E-34 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 2.2E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 Pfam PF07702 UTRA domain 103 237 6.1E-22 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 SMART SM00866 102 239 2.6E-26 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 SUPERFAMILY SSF46785 12 85 2.64E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 5.0E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS11920 e3fb03a04d9de462cc151d497162d360 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 5.0E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 SUPERFAMILY SSF52833 4 182 2.76E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 PANTHER PTHR11592:SF40 1 182 3.3E-91 T 22-04-2016 YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 22-04-2016 IPR029759 Glutathione peroxidase active site YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 Gene3D G3DSA:3.40.30.10 5 182 1.2E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 PANTHER PTHR11592 1 182 3.3E-91 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 PIRSF PIRSF000303 1 184 1.6E-61 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 Pfam PF00255 Glutathione peroxidase 5 111 1.8E-39 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPTB_RS12710 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPTB_RS15045 1a24278fc87b49941b2b0ebc1d90e0ef 64 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 62 28.52 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 YPTB_RS15045 1a24278fc87b49941b2b0ebc1d90e0ef 64 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 8.8E-38 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 YPTB_RS10105 15e7e841809b881e809dfbffd8194f08 364 Pfam PF05954 Phage late control gene D protein (GPD) 87 346 1.0E-32 T 22-04-2016 YPTB_RS10105 15e7e841809b881e809dfbffd8194f08 364 SUPERFAMILY SSF69279 11 184 1.13E-26 T 22-04-2016 YPTB_RS14600 acf970ab4a0a2b91cf1dcd4b79653322 143 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 3 83 8.2E-46 T 22-04-2016 IPR032753 HicB-like antitoxin YPTB_RS14600 acf970ab4a0a2b91cf1dcd4b79653322 143 SUPERFAMILY SSF143100 5 65 5.36E-5 T 22-04-2016 YPTB_RS16865 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 Gene3D G3DSA:1.10.3290.10 29 273 1.1E-51 T 22-04-2016 IPR003812 Fido domain YPTB_RS16865 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 PANTHER PTHR13504:SF29 6 370 9.8E-167 T 22-04-2016 YPTB_RS16865 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 Pfam PF02661 Fic/DOC family 110 210 5.7E-19 T 22-04-2016 IPR003812 Fido domain YPTB_RS16865 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 SUPERFAMILY SSF140931 87 270 1.31E-31 T 22-04-2016 IPR003812 Fido domain YPTB_RS16865 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 PANTHER PTHR13504 6 370 9.8E-167 T 22-04-2016 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 PANTHER PTHR32060 2 603 0.0 T 22-04-2016 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 533 666 3.4E-41 T 22-04-2016 IPR020992 Tail specific protease, C-terminal YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 Gene3D G3DSA:3.30.750.44 195 250 4.3E-5 T 22-04-2016 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 1.8E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 SMART SM00228 245 322 1.3E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 Gene3D G3DSA:3.90.226.10 645 672 1.2E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 Gene3D G3DSA:3.90.226.10 334 532 1.2E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 SMART SM00245 325 530 3.0E-81 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 PANTHER PTHR32060:SF11 2 603 0.0 T 22-04-2016 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 550 2.0E-126 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 Gene3D G3DSA:2.30.42.10 251 333 1.5E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 Pfam PF03572 Peptidase family S41 355 528 5.5E-53 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 SUPERFAMILY SSF50156 215 346 1.4E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 SUPERFAMILY SSF52096 349 539 6.79E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS12930 9f21e618d324f5ba9a33ac1efeaafd86 692 SUPERFAMILY SSF52096 165 263 6.79E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 SUPERFAMILY SSF46785 1 83 1.23E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 Gene3D G3DSA:1.10.10.10 1 84 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.0E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 Gene3D G3DSA:3.40.190.10 177 267 1.1E-31 T 22-04-2016 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 Gene3D G3DSA:3.40.190.10 88 176 6.0E-25 T 22-04-2016 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 SUPERFAMILY SSF53850 91 287 2.05E-36 T 22-04-2016 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 PANTHER PTHR30346 1 287 1.8E-127 T 22-04-2016 YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 Pfam PF03466 LysR substrate binding domain 89 287 1.5E-42 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS10580 e05ee5d0507bde6d3f4f30e2357bd257 292 PANTHER PTHR30346:SF6 1 287 1.8E-127 T 22-04-2016 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.30.470.20 96 239 7.8E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.30.1490.20 22 95 1.3E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 PIRSF PIRSF001554 1 388 1.6E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 8.6E-182 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.40.50.261 241 383 1.1E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 SUPERFAMILY SSF52210 240 385 1.96E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 Pfam PF00549 CoA-ligase 262 382 4.3E-24 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 Pfam PF08442 ATP-grasp domain 2 203 2.8E-83 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.14 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 PANTHER PTHR11815 1 388 5.6E-236 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPTB_RS06350 302da6befff8057832dbd8bbbcc08d3a 388 SUPERFAMILY SSF56059 1 238 2.65E-81 T 22-04-2016 YPTB_RS13990 2aa43b20da3c7458c4462c4b08fa1675 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 20.052 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YPTB_RS13990 2aa43b20da3c7458c4462c4b08fa1675 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.3E-22 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YPTB_RS13990 2aa43b20da3c7458c4462c4b08fa1675 100 PANTHER PTHR11434 3 100 1.4E-66 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YPTB_RS13990 2aa43b20da3c7458c4462c4b08fa1675 100 PANTHER PTHR11434:SF4 3 100 1.4E-66 T 22-04-2016 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 Gene3D G3DSA:3.40.190.10 180 265 1.8E-22 T 22-04-2016 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.44E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.44E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.44E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 Pfam PF03466 LysR substrate binding domain 92 296 1.8E-42 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 Gene3D G3DSA:3.40.190.10 95 179 8.9E-21 T 22-04-2016 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 SUPERFAMILY SSF46785 7 114 2.45E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 PANTHER PTHR30537 1 299 9.9E-105 T 22-04-2016 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 SUPERFAMILY SSF53850 92 299 6.52E-46 T 22-04-2016 YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 Gene3D G3DSA:1.10.10.10 10 87 1.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06685 7d56ff2b452d4b69742d6c83554ac8f5 303 PANTHER PTHR30537:SF5 1 299 9.9E-105 T 22-04-2016 YPTB_RS02800 e66437f76dc90a7810dd8cc270b13554 351 Gene3D G3DSA:3.20.20.30 19 339 1.5E-88 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPTB_RS02800 e66437f76dc90a7810dd8cc270b13554 351 PANTHER PTHR30137 12 346 5.9E-161 T 22-04-2016 YPTB_RS02800 e66437f76dc90a7810dd8cc270b13554 351 PANTHER PTHR30137:SF2 12 346 5.9E-161 T 22-04-2016 YPTB_RS02800 e66437f76dc90a7810dd8cc270b13554 351 SUPERFAMILY SSF51679 19 339 4.71E-82 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPTB_RS02800 e66437f76dc90a7810dd8cc270b13554 351 Pfam PF00296 Luciferase-like monooxygenase 34 255 2.7E-29 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPTB_RS02800 e66437f76dc90a7810dd8cc270b13554 351 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 20 340 2.6E-137 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 YPTB_RS18050 42000b3053223279f86de25db3ea44e0 218 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 76 2.1E-18 T 22-04-2016 IPR005648 Flagellar hook capping protein YPTB_RS18050 42000b3053223279f86de25db3ea44e0 218 PANTHER PTHR30435:SF15 1 195 1.2E-59 T 22-04-2016 YPTB_RS18050 42000b3053223279f86de25db3ea44e0 218 Pfam PF13861 FlgD Tudor-like domain 85 214 3.3E-11 T 22-04-2016 IPR025963 FlgD Tudor-like domain YPTB_RS18050 42000b3053223279f86de25db3ea44e0 218 PANTHER PTHR30435 1 195 1.2E-59 T 22-04-2016 YPTB_RS18050 42000b3053223279f86de25db3ea44e0 218 Pfam PF13860 FlgD Ig-like domain 107 172 2.1E-9 T 22-04-2016 IPR025965 FlgD Ig-like domain YPTB_RS04160 5f2c0311489429bda84b944e862af71e 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.6E-113 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 YPTB_RS04160 5f2c0311489429bda84b944e862af71e 233 SUPERFAMILY SSF53167 1 229 2.75E-73 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS04160 5f2c0311489429bda84b944e862af71e 233 PANTHER PTHR21234 1 226 6.9E-61 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPTB_RS04160 5f2c0311489429bda84b944e862af71e 233 Pfam PF01048 Phosphorylase superfamily 2 226 1.4E-45 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS04160 5f2c0311489429bda84b944e862af71e 233 PANTHER PTHR21234:SF16 1 226 6.9E-61 T 22-04-2016 YPTB_RS04160 5f2c0311489429bda84b944e862af71e 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.74 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 YPTB_RS04160 5f2c0311489429bda84b944e862af71e 233 Gene3D G3DSA:3.40.50.1580 1 230 7.4E-76 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 Pfam PF01313 Bacterial export proteins, family 3 14 86 4.5E-26 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 62 84 4.0E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 47 62 4.0E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 26 47 4.0E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 PIRSF PIRSF004669 9 96 3.3E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 14 92 6.3E-31 T 22-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 PANTHER PTHR34040 10 97 2.6E-47 T 22-04-2016 YPTB_RS01940 618f9ff72138d3366b3d2d895f17c5da 97 PANTHER PTHR34040:SF1 10 97 2.6E-47 T 22-04-2016 YPTB_RS14605 eb065307b6d08869cf21e8dc0d903ac3 174 PANTHER PTHR30529 1 174 2.0E-104 T 22-04-2016 YPTB_RS14605 eb065307b6d08869cf21e8dc0d903ac3 174 SUPERFAMILY SSF81342 3 174 9.42E-29 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPTB_RS14605 eb065307b6d08869cf21e8dc0d903ac3 174 PANTHER PTHR30529:SF3 1 174 2.0E-104 T 22-04-2016 YPTB_RS14605 eb065307b6d08869cf21e8dc0d903ac3 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 5.1E-22 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPTB_RS00190 b858999102eff2e0dcf3d3eb962f8031 216 Pfam PF01926 50S ribosome-binding GTPase 30 148 1.3E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS00190 b858999102eff2e0dcf3d3eb962f8031 216 Gene3D G3DSA:3.40.50.300 12 200 5.8E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00190 b858999102eff2e0dcf3d3eb962f8031 216 PANTHER PTHR11649 4 206 4.9E-59 T 22-04-2016 YPTB_RS00190 b858999102eff2e0dcf3d3eb962f8031 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.43 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YPTB_RS00190 b858999102eff2e0dcf3d3eb962f8031 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 6.8E-73 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YPTB_RS00190 b858999102eff2e0dcf3d3eb962f8031 216 SUPERFAMILY SSF52540 19 201 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15305 68784a85a612f31d566fb63f5da97509 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 4.3E-39 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPTB_RS05530 64f24c9928614ffba0826f97b5a51e30 285 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 9.6E-26 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS05530 64f24c9928614ffba0826f97b5a51e30 285 SUPERFAMILY SSF51735 1 283 4.89E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05530 64f24c9928614ffba0826f97b5a51e30 285 Gene3D G3DSA:3.90.25.10 227 275 1.2E-6 T 22-04-2016 YPTB_RS05530 64f24c9928614ffba0826f97b5a51e30 285 Gene3D G3DSA:3.40.50.720 1 226 6.3E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05530 64f24c9928614ffba0826f97b5a51e30 285 PANTHER PTHR10366 2 284 4.8E-27 T 22-04-2016 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 230.234 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 Pfam PF02926 THUMP domain 34 162 3.1E-23 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 374 1.5E-128 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 384 483 3.9E-43 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 PANTHER PTHR14911:SF15 3 418 1.7E-293 T 22-04-2016 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 Gene3D G3DSA:3.40.50.620 174 334 3.1E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 SUPERFAMILY SSF52402 175 373 6.17E-42 T 22-04-2016 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 SMART SM00981 76 166 2.9E-22 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 370 2.8E-79 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 SUPERFAMILY SSF143437 1 174 1.62E-46 T 22-04-2016 YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 SUPERFAMILY SSF52821 392 482 3.01E-12 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 Gene3D G3DSA:3.40.250.10 397 481 2.5E-10 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS05235 f1270c5a00b316935d5256f44b2cc5b0 483 PANTHER PTHR14911 3 418 1.7E-293 T 22-04-2016 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 3.9E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 Gene3D G3DSA:3.30.930.10 4 251 1.1E-125 T 22-04-2016 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 Pfam PF01411 tRNA synthetases class II (A) 7 553 3.8E-233 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 SUPERFAMILY SSF55186 552 711 7.98E-53 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 206.049 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 SUPERFAMILY SSF55681 4 255 4.22E-108 T 22-04-2016 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 SUPERFAMILY SSF101353 256 464 1.44E-60 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 SUPERFAMILY SSF50447 456 552 1.07E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 PANTHER PTHR11777:SF9 1 875 0.0 T 22-04-2016 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 Pfam PF02272 DHHA1 domain 800 868 1.3E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 SMART SM00863 653 696 9.0E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPTB_RS04565 51d3f581e163a6e5983263c3de283fd0 875 PANTHER PTHR11777 1 875 0.0 T 22-04-2016 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 PANTHER PTHR18934 57 682 0.0 T 22-04-2016 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 PANTHER PTHR18934 719 847 0.0 T 22-04-2016 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 Pfam PF00271 Helicase conserved C-terminal domain 267 384 9.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 Pfam PF00270 DEAD/DEAH box helicase 67 214 7.1E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 PANTHER PTHR18934:SF109 57 682 0.0 T 22-04-2016 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 PANTHER PTHR18934:SF109 719 847 0.0 T 22-04-2016 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 SMART SM00490 286 385 2.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 SMART SM00847 445 539 5.0E-36 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 Gene3D G3DSA:3.40.50.300 253 397 1.5E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 Pfam PF04408 Helicase associated domain (HA2) 447 537 3.2E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 Pfam PF11898 Domain of unknown function (DUF3418) 693 1276 4.0E-237 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 SMART SM00382 73 365 4.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 Gene3D G3DSA:3.40.50.300 58 214 6.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 SMART SM00487 56 240 2.5E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1277 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 562 678 8.8E-17 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 YPTB_RS12225 34c707c6c39b8bc73f4cc9ac841315ee 1280 SUPERFAMILY SSF52540 55 581 9.46E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17035 51b051cd4b35801ef4b9eded1ddfec4a 164 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 135 5.7E-24 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 SUPERFAMILY SSF46689 4 98 5.38E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PANTHER PTHR32071 5 98 3.6E-34 T 22-04-2016 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.512 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS19340 b35aa6e9977e10a02a1243efe8e50ad3 98 PIRSF PIRSF002097 1 98 7.0E-46 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.7E-54 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 Gene3D G3DSA:3.30.750.70 74 153 1.1E-18 T 22-04-2016 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 PANTHER PTHR30363:SF1 1 252 3.1E-127 T 22-04-2016 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 PANTHER PTHR30363 1 252 3.1E-127 T 22-04-2016 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 SUPERFAMILY SSF46785 3 73 9.34E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 Gene3D G3DSA:1.10.10.10 2 58 1.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 SMART SM01134 72 233 8.0E-72 T 22-04-2016 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 SUPERFAMILY SSF100950 74 234 1.07E-29 T 22-04-2016 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.2E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS20430 dfcc3e33ee9097e856e70e5f4bf905e3 252 SMART SM00420 6 58 3.0E-26 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS01980 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 Pfam PF00005 ABC transporter 28 176 6.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS01980 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 PANTHER PTHR24220 13 262 6.1E-102 T 22-04-2016 YPTB_RS01980 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 SUPERFAMILY SSF52540 11 241 7.21E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01980 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 Gene3D G3DSA:3.40.50.300 13 246 3.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01980 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS01980 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 SMART SM00382 36 225 5.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01980 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 PANTHER PTHR24220:SF558 13 262 6.1E-102 T 22-04-2016 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.1770.10 360 555 8.0E-164 T 22-04-2016 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.1770.10 9 141 8.0E-164 T 22-04-2016 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.062 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 PIRSF PIRSF001423 2 561 2.6E-293 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 2.6E-303 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 Pfam PF01175 Urocanase 12 547 3.8E-260 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 PANTHER PTHR12216 6 558 0.0 T 22-04-2016 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 SUPERFAMILY SSF111326 7 555 7.72E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 PANTHER PTHR12216:SF3 6 558 0.0 T 22-04-2016 YPTB_RS20825 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.50.10730 142 349 3.0E-93 T 22-04-2016 YPTB_RS16820 82d34fe121a2cae71461cb70ab1c98c6 88 PANTHER PTHR37465 1 88 3.4E-39 T 22-04-2016 YPTB_RS16820 82d34fe121a2cae71461cb70ab1c98c6 88 PANTHER PTHR37465:SF1 1 88 3.4E-39 T 22-04-2016 YPTB_RS16820 82d34fe121a2cae71461cb70ab1c98c6 88 Pfam PF05488 PAAR motif 8 77 1.2E-22 T 22-04-2016 IPR008727 PAAR motif YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.9E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PANTHER PTHR11958 5 424 3.5E-266 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 Gene3D G3DSA:1.10.3860.10 5 406 6.2E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.62 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 PANTHER PTHR11958:SF49 5 424 3.5E-266 T 22-04-2016 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS20715 158eed2ee23d93b712877abed5f90805 429 SUPERFAMILY SSF118215 9 401 1.05E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS06915 931fc4065e182ec1929e0a8980ba1c14 85 SUPERFAMILY SSF54292 4 85 2.36E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS06915 931fc4065e182ec1929e0a8980ba1c14 85 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 77 1.1E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS06915 931fc4065e182ec1929e0a8980ba1c14 85 Gene3D G3DSA:3.10.20.30 4 84 7.4E-19 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS06915 931fc4065e182ec1929e0a8980ba1c14 85 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPTB_RS14305 e93be1c55b4daa8bc877f37e168c50c3 421 PANTHER PTHR35093:SF3 3 421 2.2E-287 T 22-04-2016 YPTB_RS14305 e93be1c55b4daa8bc877f37e168c50c3 421 PANTHER PTHR35093 3 421 2.2E-287 T 22-04-2016 YPTB_RS14305 e93be1c55b4daa8bc877f37e168c50c3 421 Gene3D G3DSA:2.40.160.60 26 421 8.3E-132 T 22-04-2016 YPTB_RS14305 e93be1c55b4daa8bc877f37e168c50c3 421 SUPERFAMILY SSF56935 26 421 4.58E-105 T 22-04-2016 YPTB_RS14305 e93be1c55b4daa8bc877f37e168c50c3 421 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 421 5.8E-138 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPTB_RS19565 76fbf8924b69c8478a5892194244c42c 135 SMART SM00530 21 76 2.3E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS19565 76fbf8924b69c8478a5892194244c42c 135 Pfam PF01381 Helix-turn-helix 22 76 1.2E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS19565 76fbf8924b69c8478a5892194244c42c 135 PANTHER PTHR10245 3 132 3.5E-52 T 22-04-2016 YPTB_RS19565 76fbf8924b69c8478a5892194244c42c 135 Gene3D G3DSA:1.10.260.40 14 80 5.4E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS19565 76fbf8924b69c8478a5892194244c42c 135 SUPERFAMILY SSF47413 17 83 2.25E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS19565 76fbf8924b69c8478a5892194244c42c 135 PANTHER PTHR10245:SF43 3 132 3.5E-52 T 22-04-2016 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 Gene3D G3DSA:1.10.230.10 280 372 1.9E-43 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PIRSF PIRSF001369 37 426 1.2E-174 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 Gene3D G3DSA:1.10.580.10 51 279 1.4E-96 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 SUPERFAMILY SSF48256 3 421 2.09E-168 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 Pfam PF00285 Citrate synthase, C-terminal domain 45 409 1.3E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PANTHER PTHR11739 38 420 3.5E-206 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 358 374 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 378 392 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 295 315 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 218 233 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 164 177 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 240 268 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPTB_RS06315 af25d3b5e81b7bad8e7fdcf0044cd578 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 420 1.2E-235 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 328 2.6E-32 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 SUPERFAMILY SSF52283 2 135 2.46E-44 T 22-04-2016 YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 Gene3D G3DSA:3.40.50.720 138 305 8.4E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 PANTHER PTHR10996:SF161 1 328 7.5E-176 T 22-04-2016 YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 SUPERFAMILY SSF51735 102 298 1.29E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.0E-53 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 PANTHER PTHR10996 1 328 7.5E-176 T 22-04-2016 YPTB_RS12260 de2b91b694d23e9a13a81a087e217b42 330 Gene3D G3DSA:3.40.50.720 1 137 2.2E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 SMART SM01086 652 743 9.2E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:1.10.1780.10 1 141 1.9E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 PANTHER PTHR11638:SF111 1 754 0.0 T 22-04-2016 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 646 1.5E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 SUPERFAMILY SSF81923 1 141 3.92E-58 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 342 8.0E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:3.40.50.300 168 348 2.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 PANTHER PTHR11638 1 754 0.0 T 22-04-2016 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 2.7E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:1.10.8.60 351 434 1.1E-30 T 22-04-2016 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 SMART SM00382 486 653 4.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 SMART SM00382 205 351 4.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.7E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 SUPERFAMILY SSF52540 436 747 1.02E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:3.40.50.300 442 662 2.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 SUPERFAMILY SSF52540 168 426 8.72E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07700 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:1.10.8.60 663 752 4.2E-32 T 22-04-2016 YPTB_RS12830 f8450f791942bcdc9b2344171f4459c0 278 Pfam PF04962 KduI/IolB family 36 272 1.3E-32 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPTB_RS12830 f8450f791942bcdc9b2344171f4459c0 278 PIRSF PIRSF006625 1 278 2.7E-136 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPTB_RS12830 f8450f791942bcdc9b2344171f4459c0 278 SUPERFAMILY SSF51182 1 262 1.2E-107 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS12830 f8450f791942bcdc9b2344171f4459c0 278 Gene3D G3DSA:2.60.120.520 20 132 6.1E-55 T 22-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPTB_RS12830 f8450f791942bcdc9b2344171f4459c0 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.325 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPTB_RS12830 f8450f791942bcdc9b2344171f4459c0 278 PANTHER PTHR38461 1 278 7.9E-184 T 22-04-2016 YPTB_RS12830 f8450f791942bcdc9b2344171f4459c0 278 Gene3D G3DSA:2.60.120.500 133 278 3.4E-78 T 22-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 Gene3D G3DSA:2.40.320.10 9 177 8.0E-38 T 22-04-2016 IPR023577 CYTH domain YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 10 178 7.9E-17 T 22-04-2016 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 SUPERFAMILY SSF55154 8 177 2.29E-38 T 22-04-2016 IPR033469 CYTH-like domain YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 SMART SM01118 8 179 7.2E-15 T 22-04-2016 IPR023577 CYTH domain YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 Pfam PF01928 CYTH domain 9 173 8.8E-23 T 22-04-2016 IPR023577 CYTH domain YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 9 149 1.0E-8 T 22-04-2016 YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 PANTHER PTHR21028:SF2 2 177 1.9E-50 T 22-04-2016 YPTB_RS06755 c1a6b9b3c5c944f23121d91f496bf76a 179 PANTHER PTHR21028 2 177 1.9E-50 T 22-04-2016 YPTB_RS20900 2aaa37394237f222f0181578f64e3470 159 Pfam PF04002 RadC-like JAB domain 40 158 4.6E-41 T 22-04-2016 IPR025657 RadC-like JAB domain YPTB_RS20900 2aaa37394237f222f0181578f64e3470 159 PANTHER PTHR30471:SF4 17 159 2.8E-70 T 22-04-2016 YPTB_RS20900 2aaa37394237f222f0181578f64e3470 159 Gene3D G3DSA:3.40.140.10 37 159 9.6E-46 T 22-04-2016 YPTB_RS20900 2aaa37394237f222f0181578f64e3470 159 PANTHER PTHR30471 17 159 2.8E-70 T 22-04-2016 YPTB_RS20535 86cf76bfffc5aa017a309195a446556e 167 Gene3D G3DSA:3.40.50.300 2 166 3.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20535 86cf76bfffc5aa017a309195a446556e 167 PRINTS PR01100 Shikimate kinase family signature 6 21 5.6E-6 T 22-04-2016 YPTB_RS20535 86cf76bfffc5aa017a309195a446556e 167 PRINTS PR01100 Shikimate kinase family signature 100 117 5.6E-6 T 22-04-2016 YPTB_RS20535 86cf76bfffc5aa017a309195a446556e 167 PANTHER PTHR11603 1 167 2.0E-86 T 22-04-2016 YPTB_RS20535 86cf76bfffc5aa017a309195a446556e 167 Pfam PF01202 Shikimate kinase 12 165 1.0E-14 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS20535 86cf76bfffc5aa017a309195a446556e 167 SUPERFAMILY SSF52540 3 165 2.47E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20535 86cf76bfffc5aa017a309195a446556e 167 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 163 3.6E-65 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 PANTHER PTHR19375 331 442 5.2E-148 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 PANTHER PTHR19375 2 44 5.2E-148 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 PANTHER PTHR19375 85 269 5.2E-148 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 SUPERFAMILY SSF53067 85 204 1.91E-26 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 SUPERFAMILY SSF53067 1 44 1.91E-26 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 SUPERFAMILY SSF53067 208 276 2.07E-32 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 Gene3D G3DSA:3.30.420.40 2 43 1.3E-28 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 Gene3D G3DSA:3.30.420.40 85 217 1.3E-28 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 Pfam PF00012 Hsp70 protein 130 228 5.9E-10 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 Pfam PF00012 Hsp70 protein 331 422 1.1E-5 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 Gene3D G3DSA:3.30.420.40 218 241 5.3E-17 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 Gene3D G3DSA:3.30.420.40 374 433 5.3E-17 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 PANTHER PTHR19375:SF182 331 442 5.2E-148 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 PANTHER PTHR19375:SF182 2 44 5.2E-148 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 PANTHER PTHR19375:SF182 85 269 5.2E-148 T 22-04-2016 YPTB_RS15190 1d25c864989977935e8e4af24cf659a7 450 SUPERFAMILY SSF53067 328 447 2.07E-32 T 22-04-2016 YPTB_RS01230 350529f8a5506de69cd3b476989d0e1f 337 Pfam PF12146 Serine aminopeptidase, S33 54 314 2.5E-54 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YPTB_RS01230 350529f8a5506de69cd3b476989d0e1f 337 SUPERFAMILY SSF53474 36 329 5.65E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS01230 350529f8a5506de69cd3b476989d0e1f 337 Gene3D G3DSA:3.40.50.1820 30 331 1.2E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS01230 350529f8a5506de69cd3b476989d0e1f 337 PANTHER PTHR11614 7 337 6.5E-178 T 22-04-2016 YPTB_RS01230 350529f8a5506de69cd3b476989d0e1f 337 PANTHER PTHR11614:SF100 7 337 6.5E-178 T 22-04-2016 YPTB_RS08775 5060155be02d554b2a6a8bda9b46c0de 366 Gene3D G3DSA:3.40.50.720 4 139 6.9E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08775 5060155be02d554b2a6a8bda9b46c0de 366 PIRSF PIRSF017494 4 363 3.1E-153 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPTB_RS08775 5060155be02d554b2a6a8bda9b46c0de 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 5.5E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS08775 5060155be02d554b2a6a8bda9b46c0de 366 SUPERFAMILY SSF51735 8 140 5.79E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08775 5060155be02d554b2a6a8bda9b46c0de 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 2.9E-161 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPTB_RS11410 26f5f9ffbe4b1469d9bd60c83f07df27 137 SUPERFAMILY SSF51316 6 133 8.89E-58 T 22-04-2016 IPR011057 Mss4-like YPTB_RS11410 26f5f9ffbe4b1469d9bd60c83f07df27 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 37.073 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPTB_RS11410 26f5f9ffbe4b1469d9bd60c83f07df27 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 135 5.5E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPTB_RS11410 26f5f9ffbe4b1469d9bd60c83f07df27 137 PANTHER PTHR10173 10 134 8.7E-61 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 YPTB_RS11410 26f5f9ffbe4b1469d9bd60c83f07df27 137 PANTHER PTHR10173:SF18 10 134 8.7E-61 T 22-04-2016 YPTB_RS11410 26f5f9ffbe4b1469d9bd60c83f07df27 137 Gene3D G3DSA:2.170.150.20 6 133 4.5E-59 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPTB_RS11410 26f5f9ffbe4b1469d9bd60c83f07df27 137 Pfam PF01641 SelR domain 12 127 2.8E-52 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 3.3E-116 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 PANTHER PTHR18895:SF69 9 292 6.6E-174 T 22-04-2016 YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 4.1E-99 T 22-04-2016 YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 PANTHER PTHR18895 9 292 6.6E-174 T 22-04-2016 YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.061 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 Gene3D G3DSA:3.40.50.150 98 286 3.3E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 PIRSF PIRSF000401 1 293 7.5E-89 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YPTB_RS19330 9886aac95fe6ed7d8ab2d0071a30aebf 293 SUPERFAMILY SSF53335 43 286 8.81E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 SMART SM00354 4 71 1.9E-4 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 Pfam PF13377 Periplasmic binding protein-like domain 173 338 6.6E-29 T 22-04-2016 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 Gene3D G3DSA:1.10.260.40 4 49 5.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 Gene3D G3DSA:3.40.50.2300 60 171 1.4E-14 T 22-04-2016 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 PANTHER PTHR30146 4 359 2.6E-125 T 22-04-2016 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 PANTHER PTHR30146:SF4 4 359 2.6E-125 T 22-04-2016 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 47 3.1E-8 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 SUPERFAMILY SSF53822 75 340 7.07E-42 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 SUPERFAMILY SSF47413 5 59 2.44E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16725 e6efe0543d72250e61459ec00b3a6b5e 360 Gene3D G3DSA:3.40.50.2300 172 339 1.6E-37 T 22-04-2016 YPTB_RS05840 c7e33f728086f25ca793aadeb2d2c8bf 373 PANTHER PTHR13096:SF5 241 373 1.2E-68 T 22-04-2016 YPTB_RS05840 c7e33f728086f25ca793aadeb2d2c8bf 373 SMART SM00558 92 215 1.3E-5 T 22-04-2016 IPR003347 JmjC domain YPTB_RS05840 c7e33f728086f25ca793aadeb2d2c8bf 373 SUPERFAMILY SSF51197 6 292 3.98E-73 T 22-04-2016 YPTB_RS05840 c7e33f728086f25ca793aadeb2d2c8bf 373 Pfam PF08007 Cupin superfamily protein 10 309 3.4E-102 T 22-04-2016 IPR003347 JmjC domain YPTB_RS05840 c7e33f728086f25ca793aadeb2d2c8bf 373 Gene3D G3DSA:2.60.120.650 7 204 1.5E-41 T 22-04-2016 YPTB_RS05840 c7e33f728086f25ca793aadeb2d2c8bf 373 PANTHER PTHR13096 241 373 1.2E-68 T 22-04-2016 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 171 179 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 PANTHER PTHR35892:SF2 2 179 1.5E-101 T 22-04-2016 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 Gene3D G3DSA:2.40.160.20 30 179 8.5E-37 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 PANTHER PTHR35892 2 179 1.5E-101 T 22-04-2016 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 167 178 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 140 161 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 93 116 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 52 64 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 SUPERFAMILY SSF56925 30 179 2.12E-27 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS11565 93d10a9b317cb79a19674ba557cbd8d2 179 Pfam PF13505 Outer membrane protein beta-barrel domain 11 179 5.0E-24 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 Pfam PF02817 e3 binding domain 114 146 1.4E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF52777 177 406 9.34E-90 T 22-04-2016 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 405 4.9E-82 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF47005 107 151 5.49E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:2.40.50.100 1 96 3.5E-27 T 22-04-2016 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 PANTHER PTHR23151 4 407 4.9E-249 T 22-04-2016 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:3.30.559.10 169 405 1.5E-91 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF51230 2 93 1.57E-24 T 22-04-2016 IPR011053 Single hybrid motif YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 PANTHER PTHR23151:SF47 4 407 4.9E-249 T 22-04-2016 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 407 1.0E-189 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:4.10.320.10 114 154 9.3E-19 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPTB_RS06345 669411f3a55a30bb060c97a5794e1491 407 Pfam PF00364 Biotin-requiring enzyme 5 77 2.5E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPTB_RS01540 a345349a30e122110b05688a7a283684 233 PANTHER PTHR19370:SF119 4 233 1.6E-127 T 22-04-2016 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 PANTHER PTHR19370 4 233 1.6E-127 T 22-04-2016 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 4.8E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPTB_RS01540 a345349a30e122110b05688a7a283684 233 SUPERFAMILY SSF63380 3 97 1.47E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 SUPERFAMILY SSF52343 100 231 1.83E-34 T 22-04-2016 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 Gene3D G3DSA:2.40.30.10 3 97 9.0E-29 T 22-04-2016 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 Gene3D G3DSA:3.40.50.80 101 231 6.2E-37 T 22-04-2016 YPTB_RS01540 a345349a30e122110b05688a7a283684 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 1.9E-21 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 PANTHER PTHR11236 30 455 8.6E-176 T 22-04-2016 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 PANTHER PTHR11236:SF18 30 455 8.6E-176 T 22-04-2016 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 SUPERFAMILY SSF56322 4 452 6.15E-147 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 PRINTS PR00095 Anthranilate synthase component I signature 306 319 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 PRINTS PR00095 Anthranilate synthase component I signature 401 415 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 PRINTS PR00095 Anthranilate synthase component I signature 386 400 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 PRINTS PR00095 Anthranilate synthase component I signature 292 305 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 Pfam PF00425 chorismate binding enzyme 190 444 7.6E-94 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 Gene3D G3DSA:3.60.120.10 19 452 5.2E-153 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 1.4E-28 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS09085 1150a8d7eba71ceb3400322924f86605 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 448 2.9E-127 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.6E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.6E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 PANTHER PTHR30146 1 340 2.7E-166 T 22-04-2016 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 SUPERFAMILY SSF47413 1 59 2.25E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 PANTHER PTHR30146:SF30 1 340 2.7E-166 T 22-04-2016 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 7.4E-42 T 22-04-2016 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:3.40.50.2300 61 170 2.3E-34 T 22-04-2016 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:1.10.260.40 2 60 1.1E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 63.616 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 SMART SM00354 1 71 2.0E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 SUPERFAMILY SSF53822 60 340 1.02E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS12530 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:3.40.50.2300 171 332 4.6E-62 T 22-04-2016 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 SUPERFAMILY SSF53098 5 394 5.22E-91 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 PANTHER PTHR10322 75 789 3.0E-222 T 22-04-2016 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 Pfam PF00136 DNA polymerase family B 383 742 6.1E-41 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 Gene3D G3DSA:3.90.1600.10 517 576 4.7E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 Gene3D G3DSA:3.90.1600.10 399 436 4.7E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 ProSitePatterns PS00116 DNA polymerase family B signature. 548 556 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 SUPERFAMILY SSF56672 390 783 6.67E-117 T 22-04-2016 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 420 433 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 546 554 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 494 506 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 209 301 2.6E-5 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 75 165 1.5E-4 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 SMART SM00486 151 560 4.0E-61 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03685 fc227bf6b3952ff9ae6f8cf4bd71211b 789 Gene3D G3DSA:3.30.420.10 151 368 6.3E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS20860 99d8b903e4d63e70a3800534a3fb3e2f 335 PANTHER PTHR30472:SF19 30 335 3.8E-128 T 22-04-2016 YPTB_RS20860 99d8b903e4d63e70a3800534a3fb3e2f 335 PANTHER PTHR30472 30 335 3.8E-128 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS20860 99d8b903e4d63e70a3800534a3fb3e2f 335 Gene3D G3DSA:1.10.3470.10 51 332 3.2E-43 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS20860 99d8b903e4d63e70a3800534a3fb3e2f 335 SUPERFAMILY SSF81345 26 331 9.02E-44 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS20860 99d8b903e4d63e70a3800534a3fb3e2f 335 Pfam PF01032 FecCD transport family 49 331 1.4E-42 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 PANTHER PTHR10357 40 135 3.1E-276 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 PANTHER PTHR10357 171 579 3.1E-276 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 Pfam PF00128 Alpha amylase, catalytic domain 174 490 1.4E-74 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 Gene3D G3DSA:2.60.40.1180 523 603 4.6E-6 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 SMART SM00642 124 518 4.1E-88 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 SUPERFAMILY SSF81296 11 95 3.08E-5 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 SUPERFAMILY SSF51011 527 604 1.44E-8 T 22-04-2016 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 Gene3D G3DSA:3.20.20.80 114 519 1.1E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 PANTHER PTHR10357:SF144 40 135 3.1E-276 T 22-04-2016 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 PANTHER PTHR10357:SF144 171 579 3.1E-276 T 22-04-2016 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 101 2.2E-7 T 22-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 SUPERFAMILY SSF51445 114 527 4.31E-92 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS05120 b68d6f69a98f363394e747192adee96c 609 PIRSF PIRSF036918 1 606 9.0E-249 T 22-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 YPTB_RS20685 7f37d839ac988069d7e525639df573ce 265 Gene3D G3DSA:3.30.428.30 37 259 1.5E-96 T 22-04-2016 YPTB_RS20685 7f37d839ac988069d7e525639df573ce 265 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 3 260 40.143 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YPTB_RS20685 7f37d839ac988069d7e525639df573ce 265 PIRSF PIRSF001273 11 263 1.1E-113 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YPTB_RS20685 7f37d839ac988069d7e525639df573ce 265 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 41 258 5.6E-92 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YPTB_RS20685 7f37d839ac988069d7e525639df573ce 265 SUPERFAMILY SSF54197 41 258 1.87E-87 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 Gene3D G3DSA:3.90.76.10 39 219 6.6E-48 T 22-04-2016 YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 Gene3D G3DSA:3.10.105.10 288 505 7.1E-70 T 22-04-2016 YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 PANTHER PTHR30290 1 534 6.3E-233 T 22-04-2016 YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.9E-106 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 PANTHER PTHR30290:SF14 1 534 6.3E-233 T 22-04-2016 YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 PIRSF PIRSF002741 23 535 2.6E-118 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPTB_RS20765 ee0f0eacd89af4ff047887bd31eb2966 535 SUPERFAMILY SSF53850 29 534 7.42E-161 T 22-04-2016 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Pfam PF00690 Cation transporter/ATPase, N-terminus 24 90 1.5E-15 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Pfam PF00689 Cation transporting ATPase, C-terminus 722 890 1.1E-17 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Pfam PF00702 haloacid dehalogenase-like hydrolase 365 653 4.4E-19 T 22-04-2016 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Gene3D G3DSA:2.70.150.10 40 74 8.3E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Gene3D G3DSA:2.70.150.10 139 270 8.3E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 SUPERFAMILY SSF81653 158 269 7.72E-26 T 22-04-2016 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 12 898 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 SMART SM00831 22 95 7.4E-18 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 403 416 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 282 298 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 299 318 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PANTHER PTHR24093:SF128 18 898 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 PANTHER PTHR24093 18 898 0.0 T 22-04-2016 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Gene3D G3DSA:1.20.1110.10 75 138 6.6E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Gene3D G3DSA:1.20.1110.10 608 890 6.6E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 728 1.0E-27 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 406 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Gene3D G3DSA:3.40.1110.10 361 546 4.8E-31 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 SUPERFAMILY SSF81660 364 547 3.14E-35 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 SUPERFAMILY SSF56784 532 682 7.41E-35 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 371 377 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 Pfam PF00122 E1-E2 ATPase 112 360 2.4E-56 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 SUPERFAMILY SSF81665 270 363 9.55E-103 T 22-04-2016 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 SUPERFAMILY SSF81665 25 144 9.55E-103 T 22-04-2016 YPTB_RS13110 695fc01968b73d4b7a860bc9d085db2e 899 SUPERFAMILY SSF81665 688 896 9.55E-103 T 22-04-2016 YPTB_RS02455 0f71988613898b52bcfef47594a34422 313 Gene3D G3DSA:3.40.50.300 10 178 4.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02455 0f71988613898b52bcfef47594a34422 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 312 29.522 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YPTB_RS02455 0f71988613898b52bcfef47594a34422 313 SUPERFAMILY SSF52540 13 155 1.19E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02455 0f71988613898b52bcfef47594a34422 313 Gene3D G3DSA:1.10.287.890 207 289 1.2E-32 T 22-04-2016 YPTB_RS02455 0f71988613898b52bcfef47594a34422 313 PANTHER PTHR11088 1 302 2.1E-125 T 22-04-2016 YPTB_RS02455 0f71988613898b52bcfef47594a34422 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 1.0E-119 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YPTB_RS02455 0f71988613898b52bcfef47594a34422 313 Pfam PF01715 IPP transferase 46 291 5.7E-84 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YPTB_RS03605 0c51a47b01dc1c081e72b35f42036938 172 SUPERFAMILY SSF141452 5 169 5.23E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS03605 0c51a47b01dc1c081e72b35f42036938 172 PANTHER PTHR36152:SF4 1 172 1.9E-141 T 22-04-2016 YPTB_RS03605 0c51a47b01dc1c081e72b35f42036938 172 PANTHER PTHR36152 1 172 1.9E-141 T 22-04-2016 YPTB_RS03605 0c51a47b01dc1c081e72b35f42036938 172 Pfam PF05638 Type VI secretion system effector, Hcp 8 147 2.9E-39 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS03605 0c51a47b01dc1c081e72b35f42036938 172 Gene3D G3DSA:2.30.110.20 5 170 6.1E-49 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS15325 a388fde768159065350341798453419e 525 SUPERFAMILY SSF52402 197 420 1.01E-55 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.4E-44 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPTB_RS15325 a388fde768159065350341798453419e 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 2.8E-154 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPTB_RS15325 a388fde768159065350341798453419e 525 Gene3D G3DSA:3.30.300.10 401 525 1.4E-53 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 Pfam PF02540 NAD synthase 223 254 6.4E-6 T 22-04-2016 IPR022310 NAD/GMP synthase YPTB_RS15325 a388fde768159065350341798453419e 525 SUPERFAMILY SSF52317 4 204 1.1E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS15325 a388fde768159065350341798453419e 525 SUPERFAMILY SSF54810 405 525 1.57E-51 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 PRINTS PR00097 Anthranilate synthase component II signature 10 24 4.4E-6 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 4.4E-6 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.4E-6 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 Gene3D G3DSA:3.40.50.620 209 399 5.8E-56 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS15325 a388fde768159065350341798453419e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.5E-6 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.5E-6 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.5E-6 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.7E-80 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPTB_RS15325 a388fde768159065350341798453419e 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.606 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPTB_RS15325 a388fde768159065350341798453419e 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 3.7E-38 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPTB_RS15325 a388fde768159065350341798453419e 525 Gene3D G3DSA:3.40.50.880 9 204 2.2E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS15325 a388fde768159065350341798453419e 525 PANTHER PTHR11922 3 522 2.7E-286 T 22-04-2016 YPTB_RS15325 a388fde768159065350341798453419e 525 PANTHER PTHR11922:SF2 3 522 2.7E-286 T 22-04-2016 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.6E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 2 77 5.0E-31 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.331 T 22-04-2016 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YPTB_RS21435 56b533cc370c1e28d908debdcf79489b 79 PANTHER PTHR10031 1 78 6.8E-25 T 22-04-2016 YPTB_RS08790 79913561607635faf2461c050697dc80 319 SUPERFAMILY SSF46689 270 317 1.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08790 79913561607635faf2461c050697dc80 319 Gene3D G3DSA:1.10.10.60 270 317 5.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08790 79913561607635faf2461c050697dc80 319 PANTHER PTHR11019:SF61 10 319 1.3E-109 T 22-04-2016 YPTB_RS08790 79913561607635faf2461c050697dc80 319 PANTHER PTHR11019 10 319 1.3E-109 T 22-04-2016 YPTB_RS08790 79913561607635faf2461c050697dc80 319 SMART SM00342 233 316 2.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS08790 79913561607635faf2461c050697dc80 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS08790 79913561607635faf2461c050697dc80 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS08790 79913561607635faf2461c050697dc80 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS08790 79913561607635faf2461c050697dc80 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.7E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PANTHER PTHR19370 62 176 8.4E-147 T 22-04-2016 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PANTHER PTHR19370 205 407 8.4E-147 T 22-04-2016 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.834 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PANTHER PTHR19370:SF32 62 176 8.4E-147 T 22-04-2016 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PANTHER PTHR19370:SF32 205 407 8.4E-147 T 22-04-2016 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 SUPERFAMILY SSF52343 255 402 1.96E-38 T 22-04-2016 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 3.5E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 Gene3D G3DSA:3.40.50.80 276 392 9.0E-44 T 22-04-2016 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PIRSF PIRSF000044 1 407 2.0E-217 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 SUPERFAMILY SSF63380 105 272 7.46E-35 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 Gene3D G3DSA:2.40.30.10 124 264 8.2E-57 T 22-04-2016 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 SUPERFAMILY SSF54292 35 124 1.06E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 Pfam PF00970 Oxidoreductase FAD-binding domain 200 266 6.5E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.4E-235 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 Gene3D G3DSA:3.10.20.30 34 123 3.3E-23 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS04955 1506a0f873ad60ccf714554aca53a41b 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 114 1.8E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 PANTHER PTHR22855 1 317 2.2E-142 T 22-04-2016 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 7.4E-64 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 SUPERFAMILY SSF52096 5 318 4.98E-105 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 Gene3D G3DSA:3.90.226.10 58 281 1.2E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 51.026 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS16175 fb10a07c09c06985ba1994be1ca44e6a 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.5E-171 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 Pfam PF13500 AAA domain 4 205 3.0E-29 T 22-04-2016 YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 SUPERFAMILY SSF52540 1 207 2.03E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 9.3E-44 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 Gene3D G3DSA:3.40.50.300 4 217 1.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 24.798 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 PANTHER PTHR21343:SF12 1 220 4.7E-173 T 22-04-2016 YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 PIRSF PIRSF006755 1 221 1.4E-68 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS11960 80ddf7259c2e25ef7940f62dca48eb2a 222 PANTHER PTHR21343 1 220 4.7E-173 T 22-04-2016 YPTB_RS12350 6c78c94698fd4439d1be5b5fb34439f1 465 PANTHER PTHR38605:SF1 1 465 9.1E-266 T 22-04-2016 YPTB_RS12350 6c78c94698fd4439d1be5b5fb34439f1 465 Pfam PF04317 YcjX-like family, DUF463 20 464 6.6E-190 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPTB_RS12350 6c78c94698fd4439d1be5b5fb34439f1 465 PIRSF PIRSF019381 1 465 2.8E-219 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPTB_RS12350 6c78c94698fd4439d1be5b5fb34439f1 465 PANTHER PTHR38605 1 465 9.1E-266 T 22-04-2016 YPTB_RS21015 09ad41cf2405ac4a90ef301fe57ce70e 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 2.4E-163 T 22-04-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 YPTB_RS21015 09ad41cf2405ac4a90ef301fe57ce70e 331 PANTHER PTHR30036:SF1 1 331 2.8E-185 T 22-04-2016 YPTB_RS21015 09ad41cf2405ac4a90ef301fe57ce70e 331 SUPERFAMILY SSF53822 24 317 3.08E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS21015 09ad41cf2405ac4a90ef301fe57ce70e 331 Gene3D G3DSA:3.40.50.2300 25 142 7.1E-34 T 22-04-2016 YPTB_RS21015 09ad41cf2405ac4a90ef301fe57ce70e 331 Gene3D G3DSA:3.40.50.2300 143 317 3.4E-46 T 22-04-2016 YPTB_RS21015 09ad41cf2405ac4a90ef301fe57ce70e 331 Pfam PF13407 Periplasmic binding protein domain 38 285 3.7E-60 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS21015 09ad41cf2405ac4a90ef301fe57ce70e 331 PANTHER PTHR30036 1 331 2.8E-185 T 22-04-2016 YPTB_RS14650 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 81 1.4E-16 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS14650 787d9699f6e2f6629474e373a0bbe5ca 394 PANTHER PTHR10590 4 394 2.2E-249 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS14650 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 1.7E-59 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS14650 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF07670 Nucleoside recognition 92 190 1.3E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS14650 787d9699f6e2f6629474e373a0bbe5ca 394 PANTHER PTHR10590:SF13 4 394 2.2E-249 T 22-04-2016 YPTB_RS07845 5f31753f3b8f64672c9ca4adc00543a4 481 Pfam PF07063 Domain of unknown function (DUF1338) 11 427 4.3E-117 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 YPTB_RS07845 5f31753f3b8f64672c9ca4adc00543a4 481 PANTHER PTHR39479 1 481 0.0 T 22-04-2016 YPTB_RS07845 5f31753f3b8f64672c9ca4adc00543a4 481 PANTHER PTHR39479:SF2 1 481 0.0 T 22-04-2016 YPTB_RS07845 5f31753f3b8f64672c9ca4adc00543a4 481 SMART SM01150 13 427 2.7E-227 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:3.40.50.300 206 344 7.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF09382 RQC domain 406 516 2.2E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 PANTHER PTHR13710:SF81 13 609 0.0 T 22-04-2016 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 9.4E-266 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00956 411 514 1.2E-51 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00270 DEAD/DEAH box helicase 28 185 1.1E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF52540 208 456 5.69E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00271 Helicase conserved C-terminal domain 227 331 4.8E-19 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00570 HRDC domain 535 601 1.4E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF47819 532 608 2.18E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:1.10.10.10 345 516 7.3E-62 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:3.40.50.300 14 203 7.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF16124 RecQ zinc-binding 343 404 3.8E-16 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 2.5E-200 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF52540 14 201 1.27E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 PANTHER PTHR13710 13 609 0.0 T 22-04-2016 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:1.10.150.80 532 606 1.4E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00341 531 610 3.1E-26 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00487 22 218 2.7E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS01215 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00490 250 331 5.9E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS08635 749b7f70d52ccb5109d05173c7e61115 476 Pfam PF08411 Exonuclease C-terminal 211 472 2.1E-110 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 YPTB_RS08635 749b7f70d52ccb5109d05173c7e61115 476 PIRSF PIRSF000977 2 476 1.4E-206 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 YPTB_RS08635 749b7f70d52ccb5109d05173c7e61115 476 Pfam PF00929 Exonuclease 12 191 2.0E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS08635 749b7f70d52ccb5109d05173c7e61115 476 Gene3D G3DSA:3.30.420.10 3 199 2.0E-83 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS08635 749b7f70d52ccb5109d05173c7e61115 476 PANTHER PTHR11046:SF2 1 476 0.0 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 YPTB_RS08635 749b7f70d52ccb5109d05173c7e61115 476 PANTHER PTHR11046 1 476 0.0 T 22-04-2016 YPTB_RS08635 749b7f70d52ccb5109d05173c7e61115 476 SUPERFAMILY SSF53098 8 474 1.64E-135 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 Gene3D G3DSA:3.20.20.30 4 253 5.5E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 Gene3D G3DSA:3.20.20.30 287 350 5.5E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 380 70.031 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 SUPERFAMILY SSF51679 4 349 1.27E-97 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 1.8E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 PANTHER PTHR30011 1 380 2.5E-223 T 22-04-2016 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 PANTHER PTHR30011:SF1 1 380 2.5E-223 T 22-04-2016 YPTB_RS19490 bc007326df0f037c6253da5a65abb178 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 2.8E-189 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 SMART SM00930 265 340 6.4E-24 T 22-04-2016 IPR018449 NIL domain YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.4E-196 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 Pfam PF00005 ABC transporter 21 169 1.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 SUPERFAMILY SSF55021 248 343 1.26E-24 T 22-04-2016 YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 Pfam PF09383 NIL domain 268 339 6.3E-18 T 22-04-2016 IPR018449 NIL domain YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 PANTHER PTHR24220 3 303 3.2E-200 T 22-04-2016 YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 SUPERFAMILY SSF52540 1 240 2.48E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 Gene3D G3DSA:3.40.50.300 1 237 3.9E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 SMART SM00382 30 217 1.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 Gene3D G3DSA:3.30.70.260 238 343 2.9E-30 T 22-04-2016 YPTB_RS16105 b820fbf1107f4c411f391068bedcbfbf 343 PANTHER PTHR24220:SF455 3 303 3.2E-200 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 YPTB_RS10635 027271c28473b904620620244292531b 335 Hamap MF_00313 Glutaminase [glsA]. 24 326 40.831 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS10635 027271c28473b904620620244292531b 335 PANTHER PTHR12544 10 335 4.3E-224 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS10635 027271c28473b904620620244292531b 335 SUPERFAMILY SSF56601 24 326 2.72E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS10635 027271c28473b904620620244292531b 335 TIGRFAM TIGR03814 Gln_ase: glutaminase A 27 326 1.3E-100 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS10635 027271c28473b904620620244292531b 335 PANTHER PTHR12544:SF31 10 335 4.3E-224 T 22-04-2016 YPTB_RS10635 027271c28473b904620620244292531b 335 Gene3D G3DSA:3.40.710.10 22 326 7.2E-102 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS10635 027271c28473b904620620244292531b 335 Pfam PF04960 Glutaminase 42 326 2.4E-95 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 SUPERFAMILY SSF52738 156 343 2.22E-75 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 Gene3D G3DSA:3.40.50.180 155 342 1.3E-85 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 Pfam PF00072 Response regulator receiver domain 6 109 2.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 PIRSF PIRSF000876 1 346 1.5E-137 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 SUPERFAMILY SSF52172 1 108 3.27E-27 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 PANTHER PTHR24421 3 349 2.7E-193 T 22-04-2016 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 Gene3D G3DSA:3.40.50.2300 2 108 3.5E-27 T 22-04-2016 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 Pfam PF01339 CheB methylesterase 159 336 1.3E-62 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.287 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 PANTHER PTHR24421:SF21 3 349 2.7E-193 T 22-04-2016 YPTB_RS13050 41073870ae1df1dfdec6bcbfc67823b4 349 SMART SM00448 4 119 1.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS05405 5d35e388d29a5088b50e27eb74ac953b 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 31 95 1.6E-15 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS05405 5d35e388d29a5088b50e27eb74ac953b 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 32 111 2.2E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS05405 5d35e388d29a5088b50e27eb74ac953b 129 Gene3D G3DSA:1.10.10.10 30 113 1.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05405 5d35e388d29a5088b50e27eb74ac953b 129 SUPERFAMILY SSF46767 30 112 1.96E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS05405 5d35e388d29a5088b50e27eb74ac953b 129 PANTHER PTHR10815 1 127 1.3E-66 T 22-04-2016 YPTB_RS05405 5d35e388d29a5088b50e27eb74ac953b 129 PANTHER PTHR10815:SF2 1 127 1.3E-66 T 22-04-2016 YPTB_RS06815 d94dbc02efa6cc505256a8dba134eb3b 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 7.6E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPTB_RS06815 d94dbc02efa6cc505256a8dba134eb3b 278 Gene3D G3DSA:3.40.50.300 34 275 1.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06815 d94dbc02efa6cc505256a8dba134eb3b 278 SUPERFAMILY SSF52540 36 276 2.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06815 d94dbc02efa6cc505256a8dba134eb3b 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 3.8E-112 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YPTB_RS06815 d94dbc02efa6cc505256a8dba134eb3b 278 PANTHER PTHR24220:SF366 39 278 2.1E-148 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YPTB_RS06815 d94dbc02efa6cc505256a8dba134eb3b 278 Pfam PF00005 ABC transporter 53 207 1.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06815 d94dbc02efa6cc505256a8dba134eb3b 278 PANTHER PTHR24220 39 278 2.1E-148 T 22-04-2016 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911 1 163 2.2E-228 T 22-04-2016 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911 181 345 2.2E-228 T 22-04-2016 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 9.6E-79 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911:SF97 1 163 2.2E-228 T 22-04-2016 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911:SF97 181 345 2.2E-228 T 22-04-2016 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 PIRSF PIRSF000235 1 347 2.0E-200 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 9.7E-198 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 SMART SM01240 7 344 5.1E-139 T 22-04-2016 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 Gene3D G3DSA:3.20.20.70 2 343 5.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.366 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YPTB_RS03940 6e8aaaefb5aacf41f9412dd8ea577aea 347 SUPERFAMILY SSF51412 7 335 3.53E-100 T 22-04-2016 YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 816 840 6100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1395 1419 6300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1159 1180 3300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 999 1040 690.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1533 1554 4300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1673 1697 160.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1819 1843 93.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1718 1742 2500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1568 1589 4600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1328 1372 10000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 1865 1889 4900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 777 809 2100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 625 646 990.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 557 593 4200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00710 210 232 9100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SUPERFAMILY SSF51126 64 363 6.59E-48 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 2.9E-4 T 22-04-2016 IPR024973 ESPR domain YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 PANTHER PTHR12338 336 1638 0.0 T 22-04-2016 YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 PANTHER PTHR12338 2 307 0.0 T 22-04-2016 YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 PANTHER PTHR12338 1785 2053 0.0 T 22-04-2016 YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 104 176 3.3E-25 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 PANTHER PTHR12338:SF6 336 1638 0.0 T 22-04-2016 YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 PANTHER PTHR12338:SF6 2 307 0.0 T 22-04-2016 YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 PANTHER PTHR12338:SF6 1785 2053 0.0 T 22-04-2016 YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 SMART SM00912 70 182 7.1E-37 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS04895 f6a67edcd2cb94968a5d3c5ac1baa942 2056 Pfam PF05860 haemagglutination activity domain 90 178 1.5E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS15460 43f0b48a230cdfcbf648e6e73c39493d 128 Gene3D G3DSA:3.90.1010.10 2 126 4.2E-55 T 22-04-2016 YPTB_RS15460 43f0b48a230cdfcbf648e6e73c39493d 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 9.7E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 YPTB_RS15460 43f0b48a230cdfcbf648e6e73c39493d 128 PANTHER PTHR10093:SF3 1 128 3.0E-104 T 22-04-2016 YPTB_RS15460 43f0b48a230cdfcbf648e6e73c39493d 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.5E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 YPTB_RS15460 43f0b48a230cdfcbf648e6e73c39493d 128 PANTHER PTHR10093 1 128 3.0E-104 T 22-04-2016 YPTB_RS15460 43f0b48a230cdfcbf648e6e73c39493d 128 SUPERFAMILY SSF82649 1 125 5.49E-47 T 22-04-2016 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 Gene3D G3DSA:2.40.50.140 5 68 1.7E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 SUPERFAMILY SSF50249 3 69 1.49E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 43 61 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 7 22 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 28 37 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 PIRSF PIRSF002599 1 70 1.7E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 PANTHER PTHR11544 1 70 4.2E-48 T 22-04-2016 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 PANTHER PTHR11544:SF54 1 70 4.2E-48 T 22-04-2016 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 SMART SM00357 6 70 3.3E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS15955 2a87be951f9f5e5360ee4d71855f0ca3 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.9E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 Gene3D G3DSA:2.60.20.10 25 106 5.0E-23 T 22-04-2016 YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 SUPERFAMILY SSF49695 99 206 2.98E-19 T 22-04-2016 IPR011024 Gamma-crystallin-related YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 Pfam PF00030 Beta/Gamma crystallin 113 206 2.6E-6 T 22-04-2016 IPR001064 Beta/gamma crystallin YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 SMART SM00247 26 110 0.18 T 22-04-2016 IPR001064 Beta/gamma crystallin YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 SMART SM00247 112 207 2.3E-4 T 22-04-2016 IPR001064 Beta/gamma crystallin YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 Pfam PF08964 Beta/Gamma crystallin 25 90 4.1E-7 T 22-04-2016 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0016337 YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 Pfam PF09101 Exotoxin A binding 339 403 1.6E-5 T 22-04-2016 IPR015185 Exotoxin A, binding YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 SUPERFAMILY SSF49695 14 108 2.46E-15 T 22-04-2016 IPR011024 Gamma-crystallin-related YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 Gene3D G3DSA:2.60.20.10 107 210 4.2E-30 T 22-04-2016 YPTB_RS15400 71ca6a1847d67e93c68f8f7bd89dbba2 806 Gene3D G3DSA:2.60.120.200 351 403 2.0E-4 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 PANTHER PTHR24220 13 253 3.1E-199 T 22-04-2016 YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 Gene3D G3DSA:3.40.50.300 12 252 3.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 4.0E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 Pfam PF00005 ABC transporter 27 182 2.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 PANTHER PTHR24220:SF560 13 253 3.1E-199 T 22-04-2016 YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 SUPERFAMILY SSF52540 11 245 4.73E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21375 90941fafa5978fb710eadef21efb7356 258 SMART SM00382 36 238 5.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 PANTHER PTHR30193 270 523 7.5E-151 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 PANTHER PTHR30193 45 113 7.5E-151 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 SUPERFAMILY SSF161098 272 514 7.06E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 108 271 6.5E-62 T 22-04-2016 IPR029345 Maltose transport system permease protein MalF, P2 domain YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:2.40.430.10 126 205 1.6E-31 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 SUPERFAMILY SSF160964 23 271 1.44E-82 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:1.10.3720.10 286 521 6.3E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:3.10.650.10 206 279 3.6E-36 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:1.20.58.370 11 103 2.2E-38 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 PANTHER PTHR30193:SF22 270 523 7.5E-151 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 PANTHER PTHR30193:SF22 45 113 7.5E-151 T 22-04-2016 YPTB_RS19710 4e29038faee76da4e307aa864e6ebc41 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 308 512 7.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07800 046c64e97609f5ee02ef0a3da960beec 615 Gene3D G3DSA:3.30.1300.30 526 613 1.5E-14 T 22-04-2016 YPTB_RS07800 046c64e97609f5ee02ef0a3da960beec 615 Pfam PF03895 YadA-like C-terminal region 541 613 4.2E-12 T 22-04-2016 IPR005594 YadA-like, C-terminal YPTB_RS07800 046c64e97609f5ee02ef0a3da960beec 615 PANTHER PTHR35843 1 615 2.1E-90 T 22-04-2016 YPTB_RS07800 046c64e97609f5ee02ef0a3da960beec 615 Gene3D G3DSA:2.150.10.10 210 388 6.9E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS07800 046c64e97609f5ee02ef0a3da960beec 615 SUPERFAMILY SSF54523 526 613 2.82E-13 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1036 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PANTHER PTHR32063:SF13 1 1037 0.0 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82714 183 273 2.22E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 Gene3D G3DSA:3.30.70.1430 39 140 6.8E-32 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82693 39 132 7.85E-25 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 Gene3D G3DSA:3.30.70.1430 567 671 5.2E-35 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82714 722 808 3.14E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82693 808 855 5.41E-23 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82693 672 721 5.41E-23 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PANTHER PTHR32063 1 1037 0.0 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 Gene3D G3DSA:1.20.1640.10 293 507 4.0E-62 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82866 297 498 6.15E-51 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 Gene3D G3DSA:1.10.3850.10 814 1026 1.2E-50 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82693 565 671 1.52E-29 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82866 833 1025 2.35E-38 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 Gene3D G3DSA:3.30.2090.10 182 276 4.1E-29 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 Gene3D G3DSA:3.30.2090.10 722 808 8.2E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82693 136 183 3.14E-25 T 22-04-2016 YPTB_RS02810 ede4459ddca53951b6ffb66575ca710e 1041 SUPERFAMILY SSF82693 275 331 3.14E-25 T 22-04-2016 YPTB_RS09045 a943112d4445c58251fc9f2e05286690 132 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 3 123 6.0E-22 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 YPTB_RS09045 a943112d4445c58251fc9f2e05286690 132 SUPERFAMILY SSF55331 3 125 2.32E-42 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily YPTB_RS09045 a943112d4445c58251fc9f2e05286690 132 PANTHER PTHR37950 2 130 1.3E-50 T 22-04-2016 YPTB_RS09045 a943112d4445c58251fc9f2e05286690 132 PANTHER PTHR37950:SF1 2 130 1.3E-50 T 22-04-2016 YPTB_RS09045 a943112d4445c58251fc9f2e05286690 132 Gene3D G3DSA:3.30.429.10 3 126 1.9E-45 T 22-04-2016 YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 Gene3D G3DSA:3.30.420.40 132 278 7.0E-48 T 22-04-2016 YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 PANTHER PTHR18964:SF134 1 303 1.8E-160 T 22-04-2016 YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 SUPERFAMILY SSF53067 1 301 2.36E-60 T 22-04-2016 YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 PANTHER PTHR18964 1 303 1.8E-160 T 22-04-2016 YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 304 69.338 T 22-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 Pfam PF00480 ROK family 2 301 4.9E-71 T 22-04-2016 IPR000600 ROK family YPTB_RS13265 bcd5d7446a5227636cce9a56b88038a2 304 Gene3D G3DSA:3.30.420.40 1 131 8.2E-39 T 22-04-2016 YPTB_RS05340 6c99e95cf2618c43c2c58173773ddd7a 148 Gene3D G3DSA:1.10.150.320 79 147 1.1E-16 T 22-04-2016 YPTB_RS05340 6c99e95cf2618c43c2c58173773ddd7a 148 SUPERFAMILY SSF47781 72 146 7.34E-24 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS05340 6c99e95cf2618c43c2c58173773ddd7a 148 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 80 146 4.5E-24 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPTB_RS05340 6c99e95cf2618c43c2c58173773ddd7a 148 Pfam PF12836 Helix-hairpin-helix motif 83 146 1.1E-21 T 22-04-2016 YPTB_RS05340 6c99e95cf2618c43c2c58173773ddd7a 148 PANTHER PTHR21180 37 146 8.1E-32 T 22-04-2016 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 SMART SM00388 280 350 5.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 SUPERFAMILY SSF55874 340 501 1.83E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 501 9.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 Gene3D G3DSA:3.30.565.10 336 501 9.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 SMART SM00387 391 502 6.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 PANTHER PTHR24423 267 509 6.8E-65 T 22-04-2016 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 PANTHER PTHR24423 7 14 6.8E-65 T 22-04-2016 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 SUPERFAMILY SSF47384 265 347 3.73E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 Gene3D G3DSA:1.10.287.130 273 335 5.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS14790 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 499 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS20150 29997a20f319fe900db3c6f619c63f97 78 SUPERFAMILY SSF118001 1 71 2.48E-28 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPTB_RS20150 29997a20f319fe900db3c6f619c63f97 78 Gene3D G3DSA:1.10.10.610 1 72 5.5E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPTB_RS20150 29997a20f319fe900db3c6f619c63f97 78 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.09 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPTB_RS20150 29997a20f319fe900db3c6f619c63f97 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 8.8E-34 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPTB_RS20150 29997a20f319fe900db3c6f619c63f97 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 9.0E-27 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPTB_RS20150 29997a20f319fe900db3c6f619c63f97 78 PIRSF PIRSF006169 1 76 1.9E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 PANTHER PTHR10772 1 96 2.5E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.4E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.991 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 Gene3D G3DSA:2.30.33.40 1 96 4.1E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 SMART SM00883 2 95 1.1E-48 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPTB_RS02325 03d2438c4a87a8801d6649c3c51a021d 97 SUPERFAMILY SSF50129 1 96 3.06E-31 T 22-04-2016 IPR011032 GroES-like YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 Gene3D G3DSA:3.30.70.360 209 319 1.1E-42 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 Pfam PF07687 Peptidase dimerisation domain 206 303 1.5E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 Pfam PF01546 Peptidase family M20/M25/M40 139 400 2.2E-14 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 3.0E-154 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 Gene3D G3DSA:3.40.630.10 322 407 7.3E-113 T 22-04-2016 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 Gene3D G3DSA:3.40.630.10 1 208 7.3E-113 T 22-04-2016 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014 2 91 2.7E-201 T 22-04-2016 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014 131 409 2.7E-201 T 22-04-2016 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 PIRSF PIRSF037215 1 408 1.3E-183 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014:SF3 2 91 2.7E-201 T 22-04-2016 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014:SF3 131 409 2.7E-201 T 22-04-2016 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.757 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 SUPERFAMILY SSF55031 208 320 7.22E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 SUPERFAMILY SSF53187 322 400 2.41E-78 T 22-04-2016 YPTB_RS13255 8f75b236f89f8d1093553b6913fefe70 411 SUPERFAMILY SSF53187 1 209 2.41E-78 T 22-04-2016 YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 Pfam PF00248 Aldo/keto reductase family 17 291 7.1E-61 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 Gene3D G3DSA:3.20.20.100 6 292 1.4E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 PANTHER PTHR11732 2 298 6.4E-163 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 SUPERFAMILY SSF51430 8 295 1.83E-72 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.0E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 PRINTS PR00069 Aldo-keto reductase signature 225 249 3.0E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.0E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS12470 668b37b427ecda904b6edcb3c8427209 298 PANTHER PTHR11732:SF10 2 298 6.4E-163 T 22-04-2016 YPTB_RS19720 addd5a07e6a65e62b6e165a69db113cc 135 PANTHER PTHR37819:SF1 1 135 8.4E-52 T 22-04-2016 YPTB_RS19720 addd5a07e6a65e62b6e165a69db113cc 135 PANTHER PTHR37819 1 135 8.4E-52 T 22-04-2016 YPTB_RS19720 addd5a07e6a65e62b6e165a69db113cc 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.941 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YPTB_RS19720 addd5a07e6a65e62b6e165a69db113cc 135 PIRSF PIRSF029598 1 135 1.7E-48 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YPTB_RS19720 addd5a07e6a65e62b6e165a69db113cc 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 5.6E-16 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 PANTHER PTHR35272 5 237 6.8E-122 T 22-04-2016 YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 SUPERFAMILY SSF54423 22 80 1.44E-17 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 Gene3D G3DSA:3.10.450.70 22 82 3.6E-26 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 PANTHER PTHR35272:SF3 5 237 6.8E-122 T 22-04-2016 YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 SUPERFAMILY SSF52833 88 230 1.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 Pfam PF13098 Thioredoxin-like domain 104 227 3.1E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 4.3E-15 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPTB_RS17155 47d3f9e6b1da54d7840e3344d20424b9 238 Gene3D G3DSA:3.40.30.10 99 232 5.2E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 PANTHER PTHR26402:SF292 3 237 8.8E-70 T 22-04-2016 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 1.9E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 Gene3D G3DSA:3.40.50.2300 2 124 9.7E-37 T 22-04-2016 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 SUPERFAMILY SSF52172 2 124 1.17E-35 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 SUPERFAMILY SSF46894 135 233 1.79E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 Pfam PF00072 Response regulator receiver domain 5 115 2.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 SMART SM00448 3 115 1.6E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 SMART SM00862 156 232 1.8E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 PANTHER PTHR26402 3 237 8.8E-70 T 22-04-2016 YPTB_RS20560 3d7c1fd3bcb511ced6acb26c15fb183c 239 Gene3D G3DSA:1.10.10.10 137 235 2.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 PANTHER PTHR11654:SF99 5 496 1.2E-250 T 22-04-2016 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 490 51.957 T 22-04-2016 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Gene3D G3DSA:1.20.1250.20 273 482 6.5E-8 T 22-04-2016 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Gene3D G3DSA:1.20.1250.20 21 203 2.4E-18 T 22-04-2016 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Pfam PF00854 POT family 89 445 6.7E-88 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 PANTHER PTHR11654 5 496 1.2E-250 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 486 1.1E-137 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 SUPERFAMILY SSF103473 259 488 4.71E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS12415 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 SUPERFAMILY SSF103473 18 212 4.71E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 15 342 3.1E-117 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 PANTHER PTHR10055:SF10 5 346 2.2E-192 T 22-04-2016 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 Gene3D G3DSA:1.10.240.10 218 336 6.1E-20 T 22-04-2016 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 15 343 42.767 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 PANTHER PTHR10055 5 346 2.2E-192 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 Gene3D G3DSA:3.40.50.620 16 217 8.3E-91 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 SUPERFAMILY SSF52374 17 342 7.24E-100 T 22-04-2016 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 28 44 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 207 217 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 154 175 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 78 97 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 Pfam PF00579 tRNA synthetases class I (W and Y) 15 297 2.7E-87 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS20245 754c939f3d92a6c590a72990464e1960 346 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 24 33 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS12810 ace24be9af9f6a516bc461176d46ad44 291 Gene3D G3DSA:3.90.1200.10 96 247 5.2E-13 T 22-04-2016 YPTB_RS12810 ace24be9af9f6a516bc461176d46ad44 291 PANTHER PTHR12149:SF8 1 289 5.7E-123 T 22-04-2016 YPTB_RS12810 ace24be9af9f6a516bc461176d46ad44 291 Pfam PF03881 Fructosamine kinase 1 285 2.8E-116 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YPTB_RS12810 ace24be9af9f6a516bc461176d46ad44 291 PIRSF PIRSF006221 1 287 1.2E-91 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YPTB_RS12810 ace24be9af9f6a516bc461176d46ad44 291 PANTHER PTHR12149 1 289 5.7E-123 T 22-04-2016 YPTB_RS12810 ace24be9af9f6a516bc461176d46ad44 291 Gene3D G3DSA:3.30.200.20 32 90 3.4E-4 T 22-04-2016 YPTB_RS12810 ace24be9af9f6a516bc461176d46ad44 291 SUPERFAMILY SSF56112 4 279 2.13E-38 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 SUPERFAMILY SSF56176 344 429 2.13E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 Gene3D G3DSA:3.30.465.10 341 425 1.6E-27 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 Pfam PF00571 CBS domain 287 333 0.0028 T 22-04-2016 IPR000644 CBS domain YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 SUPERFAMILY SSF54631 200 335 5.97E-21 T 22-04-2016 YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 SMART SM01091 346 426 1.2E-27 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 SMART SM00116 285 333 10.0 T 22-04-2016 IPR000644 CBS domain YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 SMART SM00116 221 270 2.1 T 22-04-2016 IPR000644 CBS domain YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 PANTHER PTHR22777:SF16 1 440 0.0 T 22-04-2016 YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 Gene3D G3DSA:3.10.580.10 198 337 1.9E-13 T 22-04-2016 YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 Pfam PF01595 Domain of unknown function DUF21 6 197 3.7E-38 T 22-04-2016 IPR002550 Domain of unknown function DUF21 YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 PANTHER PTHR22777 1 440 0.0 T 22-04-2016 YPTB_RS02585 8d880e024717e71d7e87096244d110b2 443 Pfam PF03471 Transporter associated domain 347 425 1.9E-20 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS12555 aaf62963985984edcbdd28a94776fba1 457 PIRSF PIRSF006603 5 455 1.3E-62 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS12555 aaf62963985984edcbdd28a94776fba1 457 Pfam PF01554 MatE 17 177 1.5E-37 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS12555 aaf62963985984edcbdd28a94776fba1 457 Pfam PF01554 MatE 244 405 5.6E-37 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS12555 aaf62963985984edcbdd28a94776fba1 457 PANTHER PTHR11206 2 446 3.9E-236 T 22-04-2016 YPTB_RS12555 aaf62963985984edcbdd28a94776fba1 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 51.021 T 22-04-2016 IPR022913 Multidrug resistance protein MdtK YPTB_RS12555 aaf62963985984edcbdd28a94776fba1 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 2.3E-119 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS12555 aaf62963985984edcbdd28a94776fba1 457 PANTHER PTHR11206:SF153 2 446 3.9E-236 T 22-04-2016 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PANTHER PTHR30483 5 361 8.3E-230 T 22-04-2016 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 Gene3D G3DSA:3.40.50.2300 26 225 1.3E-65 T 22-04-2016 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 SUPERFAMILY SSF53822 26 362 6.73E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 PANTHER PTHR30483:SF16 5 361 8.3E-230 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS01345 1397cf25eb5b851b2f85029447833477 371 Pfam PF13458 Periplasmic binding protein 27 349 1.8E-63 T 22-04-2016 IPR028081 Leucine-binding protein domain YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 Pfam PF02132 RecR protein 41 77 2.1E-14 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 SUPERFAMILY SSF111304 2 199 4.58E-70 T 22-04-2016 IPR023627 Recombination protein RecR YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 PANTHER PTHR30446 1 201 3.5E-119 T 22-04-2016 YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.192 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 Pfam PF13662 Toprim domain 82 172 6.1E-21 T 22-04-2016 IPR006171 Toprim domain YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 PANTHER PTHR30446:SF0 1 201 3.5E-119 T 22-04-2016 YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.0E-79 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YPTB_RS05490 7c8908940156382c6f6bf42dbb322abd 201 SMART SM00493 81 166 1.1E-17 T 22-04-2016 IPR006171 Toprim domain YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 Pfam PF00817 impB/mucB/samB family 7 154 2.3E-48 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 Gene3D G3DSA:3.30.1490.100 238 350 1.4E-42 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 342 2.3E-9 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.322 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 Gene3D G3DSA:1.10.150.20 165 237 9.5E-26 T 22-04-2016 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 SUPERFAMILY SSF100879 241 350 8.79E-28 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 PANTHER PTHR11076 1 347 7.6E-227 T 22-04-2016 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 Gene3D G3DSA:3.30.70.270 66 164 1.7E-34 T 22-04-2016 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 Pfam PF11798 IMS family HHH motif 169 197 5.6E-8 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 PANTHER PTHR11076:SF32 1 347 7.6E-227 T 22-04-2016 YPTB_RS04975 21a2ba3044456609e622ca05e3b555cf 352 SUPERFAMILY SSF56672 1 234 5.96E-92 T 22-04-2016 YPTB_RS07410 91d20795ed103c54073de4821bc807dc 381 Pfam PF01497 Periplasmic binding protein 107 321 1.8E-23 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS07410 91d20795ed103c54073de4821bc807dc 381 PANTHER PTHR30535 1 378 4.0E-99 T 22-04-2016 YPTB_RS07410 91d20795ed103c54073de4821bc807dc 381 PANTHER PTHR30535:SF5 1 378 4.0E-99 T 22-04-2016 YPTB_RS07410 91d20795ed103c54073de4821bc807dc 381 Gene3D G3DSA:3.40.50.1980 194 346 8.5E-28 T 22-04-2016 YPTB_RS07410 91d20795ed103c54073de4821bc807dc 381 SUPERFAMILY SSF53807 34 369 1.21E-54 T 22-04-2016 YPTB_RS07410 91d20795ed103c54073de4821bc807dc 381 Gene3D G3DSA:3.40.50.1980 67 188 1.5E-14 T 22-04-2016 YPTB_RS12665 3c0656ff598bf8eae2309f5fcdd0f397 154 Gene3D G3DSA:3.90.1720.10 36 154 4.8E-39 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS12665 3c0656ff598bf8eae2309f5fcdd0f397 154 SUPERFAMILY SSF54001 34 154 4.17E-38 T 22-04-2016 YPTB_RS12665 3c0656ff598bf8eae2309f5fcdd0f397 154 PANTHER PTHR21666:SF210 35 154 4.5E-41 T 22-04-2016 YPTB_RS12665 3c0656ff598bf8eae2309f5fcdd0f397 154 PANTHER PTHR21666 35 154 4.5E-41 T 22-04-2016 YPTB_RS12665 3c0656ff598bf8eae2309f5fcdd0f397 154 Pfam PF00877 NlpC/P60 family 47 153 1.3E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 SUPERFAMILY SSF52343 254 395 7.46E-38 T 22-04-2016 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 2.8E-11 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PANTHER PTHR22924 1 396 2.1E-132 T 22-04-2016 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 Gene3D G3DSA:2.40.30.10 149 254 6.2E-33 T 22-04-2016 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 58.211 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 6.6E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 SUPERFAMILY SSF46458 1 142 1.83E-39 T 22-04-2016 IPR009050 Globin-like YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 Pfam PF00042 Globin 7 102 1.8E-13 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 Gene3D G3DSA:1.10.490.10 2 141 5.4E-56 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 Gene3D G3DSA:3.40.50.80 258 395 4.0E-33 T 22-04-2016 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPTB_RS15520 dc149e615b83d5e0c37bf08787661a22 396 SUPERFAMILY SSF63380 148 253 9.03E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS13815 b1cfc02a63b8cb6291c0ebd5c698d28c 258 PANTHER PTHR10108:SF890 3 235 1.5E-104 T 22-04-2016 YPTB_RS13815 b1cfc02a63b8cb6291c0ebd5c698d28c 258 PANTHER PTHR10108 3 235 1.5E-104 T 22-04-2016 YPTB_RS13815 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Gene3D G3DSA:3.40.50.150 3 187 2.5E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS13815 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Gene3D G3DSA:1.10.150.290 188 237 6.6E-30 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YPTB_RS13815 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 43.271 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YPTB_RS13815 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Pfam PF13649 Methyltransferase domain 35 124 1.3E-13 T 22-04-2016 YPTB_RS13815 b1cfc02a63b8cb6291c0ebd5c698d28c 258 SUPERFAMILY SSF53335 6 210 1.53E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 SMART SM00885 318 444 1.9E-20 T 22-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 Pfam PF03288 Poxvirus D5 protein-like 651 748 4.9E-20 T 22-04-2016 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 SUPERFAMILY SSF46785 652 750 4.62E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 Gene3D G3DSA:3.40.50.300 441 607 2.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 Pfam PF13362 Toprim domain 181 279 5.9E-11 T 22-04-2016 IPR006171 Toprim domain YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 Gene3D G3DSA:1.10.10.10 652 749 8.0E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 Pfam PF08706 D5 N terminal like 367 447 1.6E-7 T 22-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 Pfam PF08273 Zinc-binding domain of primase-helicase 30 67 1.3E-17 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 SMART SM00778 29 67 1.6E-19 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 Gene3D G3DSA:3.90.580.10 31 96 3.1E-6 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 SUPERFAMILY SSF57783 28 94 8.5E-10 T 22-04-2016 YPTB_RS16900 aa1b2f946b07e42ae75dbf15a8d115db 763 SUPERFAMILY SSF52540 412 617 1.65E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 PANTHER PTHR26402 1 227 3.0E-128 T 22-04-2016 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 Gene3D G3DSA:1.10.10.10 131 227 1.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 SMART SM00862 150 226 3.3E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 Pfam PF00072 Response regulator receiver domain 3 113 1.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 SUPERFAMILY SSF46894 128 226 2.47E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 Gene3D G3DSA:3.40.50.2300 1 123 2.3E-40 T 22-04-2016 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 PANTHER PTHR26402:SF481 1 227 3.0E-128 T 22-04-2016 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 SMART SM00448 1 112 7.3E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS14795 b9e4bd23d207bf545c4da9084d6f1fe8 235 SUPERFAMILY SSF52172 1 122 1.85E-42 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS07890 163388197bfac711c69aa57e40fde48e 242 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 52.24 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YPTB_RS07890 163388197bfac711c69aa57e40fde48e 242 Pfam PF04288 MukE-like family 10 226 2.4E-126 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YPTB_RS03520 1865ca738883d85e3cdae431fcb5e083 266 Pfam PF06738 Putative threonine/serine exporter 21 260 4.8E-68 T 22-04-2016 IPR010619 Putative threonine/serine exporter YPTB_RS03520 1865ca738883d85e3cdae431fcb5e083 266 PANTHER PTHR34390 1 265 1.2E-150 T 22-04-2016 YPTB_RS03520 1865ca738883d85e3cdae431fcb5e083 266 PANTHER PTHR34390:SF2 1 265 1.2E-150 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PRINTS PR00834 HtrA/DegQ protease family signature 334 346 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 Pfam PF13365 Trypsin-like peptidase domain 119 255 2.2E-32 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 Gene3D G3DSA:2.40.10.10 38 182 1.2E-35 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 399 470 4.6E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 Pfam PF13180 PDZ domain 296 385 8.8E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PANTHER PTHR22939:SF84 6 61 9.2E-268 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PANTHER PTHR22939:SF84 84 92 9.2E-268 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PANTHER PTHR22939:SF84 110 410 9.2E-268 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 Gene3D G3DSA:2.40.10.10 183 295 1.0E-42 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 Gene3D G3DSA:2.30.42.10 413 478 1.4E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 Gene3D G3DSA:2.30.42.10 296 392 4.5E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PANTHER PTHR22939 6 61 9.2E-268 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PANTHER PTHR22939 84 92 9.2E-268 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 PANTHER PTHR22939 110 410 9.2E-268 T 22-04-2016 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 479 1.4E-163 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 SMART SM00228 401 473 4.7E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 SMART SM00228 294 376 5.5E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 SUPERFAMILY SSF50156 276 384 1.73E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 SUPERFAMILY SSF50494 3 59 2.65E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 SUPERFAMILY SSF50494 116 303 2.65E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPTB_RS04170 74cfd8ffca2c2ac39b1b434631d81d44 481 SUPERFAMILY SSF50156 409 477 2.1E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 SUPERFAMILY SSF53335 9 506 2.95E-134 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 Pfam PF02384 N-6 DNA Methylase 164 470 3.2E-106 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 PANTHER PTHR30408 163 491 2.6E-136 T 22-04-2016 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 202 8.3E-12 T 22-04-2016 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 299 8.3E-12 T 22-04-2016 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 8.3E-12 T 22-04-2016 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 Pfam PF12161 HsdM N-terminal domain 11 148 1.5E-19 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 PANTHER PTHR30408:SF4 163 491 2.6E-136 T 22-04-2016 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 9 485 2.7E-87 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 YPTB_RS20970 699e63be414794f25605e66afe8241d6 507 Gene3D G3DSA:3.40.50.150 188 426 5.5E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 PIRSF PIRSF006107 1 709 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 PANTHER PTHR23406:SF3 173 711 5.6E-58 T 22-04-2016 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 Gene3D G3DSA:3.40.50.300 5 218 2.7E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 Pfam PF13500 AAA domain 1 224 1.7E-49 T 22-04-2016 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 Pfam PF01515 Phosphate acetyl/butaryl transferase 386 701 1.1E-127 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 Pfam PF07085 DRTGG domain 228 339 8.6E-29 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 Gene3D G3DSA:3.40.1390.20 220 360 1.5E-30 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 SUPERFAMILY SSF53659 387 704 1.85E-93 T 22-04-2016 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 PANTHER PTHR23406 173 711 5.6E-58 T 22-04-2016 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 SUPERFAMILY SSF52540 1 235 1.22E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 Gene3D G3DSA:3.40.50.10750 519 677 4.4E-67 T 22-04-2016 YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 SUPERFAMILY SSF75138 224 348 1.57E-25 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like YPTB_RS14095 316077e920dcf04ecbb3240935b5e18a 712 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 401 701 5.8E-136 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 Pfam PF04055 Radical SAM superfamily 134 303 1.0E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 PIRSF PIRSF006004 24 391 4.3E-147 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 SUPERFAMILY SSF102114 130 348 5.1E-15 T 22-04-2016 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 PANTHER PTHR30544 1 398 3.1E-215 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 Gene3D G3DSA:3.20.20.70 131 336 3.1E-17 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 378 74.814 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 PANTHER PTHR30544:SF5 1 398 3.1E-215 T 22-04-2016 YPTB_RS15390 b1805388a2a3012c6b3595b3a2747709 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 383 7.6E-171 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS15920 c049694d96fef92d1df28b11bcece56e 144 SUPERFAMILY SSF51278 18 118 1.05E-42 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15920 c049694d96fef92d1df28b11bcece56e 144 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 18 113 7.5E-41 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15920 c049694d96fef92d1df28b11bcece56e 144 Pfam PF00699 Urease beta subunit 19 113 1.1E-40 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15920 c049694d96fef92d1df28b11bcece56e 144 PANTHER PTHR33569 1 143 2.3E-80 T 22-04-2016 YPTB_RS15920 c049694d96fef92d1df28b11bcece56e 144 Gene3D G3DSA:2.10.150.10 18 142 2.6E-47 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15920 c049694d96fef92d1df28b11bcece56e 144 PANTHER PTHR33569:SF1 1 143 2.3E-80 T 22-04-2016 YPTB_RS15920 c049694d96fef92d1df28b11bcece56e 144 Hamap MF_01954 Urease subunit beta [ureB]. 15 115 29.427 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 Gene3D G3DSA:3.20.20.70 282 468 4.0E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 277 35.073 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 278 475 30.582 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 PANTHER PTHR22854:SF2 2 305 9.4E-153 T 22-04-2016 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 280 471 6.6E-57 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 SUPERFAMILY SSF51366 280 473 5.02E-57 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 PANTHER PTHR22854 2 305 9.4E-153 T 22-04-2016 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 SUPERFAMILY SSF51366 26 274 2.24E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 Gene3D G3DSA:3.20.20.70 25 281 2.8E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 73 91 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YPTB_RS11630 f6073269b69f72e0a381d06d65b9010c 475 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 274 1.6E-95 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 PANTHER PTHR37297:SF1 2 134 1.8E-52 T 22-04-2016 YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 36.262 T 22-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 PIRSF PIRSF005087 1 134 2.3E-54 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 SUPERFAMILY SSF52218 1 132 2.69E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 Gene3D G3DSA:3.40.50.360 4 133 3.0E-55 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 Pfam PF07972 NrdI Flavodoxin like 5 123 3.6E-47 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 132 2.7E-53 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPTB_RS15985 16925d89f717312ac146e565ec59ae94 134 PANTHER PTHR37297 2 134 1.8E-52 T 22-04-2016 YPTB_RS03595 0b587fb496eee60a7a7cbce4ebd9bfc2 186 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 4.0E-55 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS03595 0b587fb496eee60a7a7cbce4ebd9bfc2 186 PIRSF PIRSF028301 2 177 5.0E-63 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS03595 0b587fb496eee60a7a7cbce4ebd9bfc2 186 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 13 163 5.7E-55 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS03595 0b587fb496eee60a7a7cbce4ebd9bfc2 186 PANTHER PTHR35850:SF1 2 177 8.3E-114 T 22-04-2016 YPTB_RS03595 0b587fb496eee60a7a7cbce4ebd9bfc2 186 PANTHER PTHR35850 2 177 8.3E-114 T 22-04-2016 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF54980 302 387 1.58E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 PANTHER PTHR23115:SF14 3 593 1.1E-303 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:2.40.50.250 483 577 1.7E-39 T 22-04-2016 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF00679 Elongation factor G C-terminus 397 476 3.6E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 7.5E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF52540 3 219 2.43E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.4E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF54980 398 512 3.26E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF50447 151 299 1.04E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:2.40.30.10 206 303 1.1E-26 T 22-04-2016 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.30.70.870 304 399 5.2E-35 T 22-04-2016 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.2E-57 T 22-04-2016 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.40.50.300 3 205 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 PANTHER PTHR23115 3 593 1.1E-303 T 22-04-2016 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 6.2E-289 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 YPTB_RS00225 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.30.70.240 400 477 4.6E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 455 2.0E-117 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 Gene3D G3DSA:2.30.38.10 314 360 1.8E-7 T 22-04-2016 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 PANTHER PTHR24096:SF109 10 460 2.7E-229 T 22-04-2016 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 SUPERFAMILY SSF56801 11 462 3.27E-91 T 22-04-2016 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 PANTHER PTHR24096 10 460 2.7E-229 T 22-04-2016 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 Gene3D G3DSA:3.40.50.980 155 296 4.5E-20 T 22-04-2016 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 Pfam PF00501 AMP-binding enzyme 16 365 7.6E-50 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 Gene3D G3DSA:3.30.300.30 363 458 1.0E-14 T 22-04-2016 YPTB_RS13870 188c7026710de2f3f5577d38137f9cee 471 Gene3D G3DSA:3.40.50.980 17 154 2.9E-19 T 22-04-2016 YPTB_RS10490 9a696bc2b209ca74e6aa502c255a0ff6 96 Gene3D G3DSA:3.30.420.40 12 55 9.6E-4 T 22-04-2016 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 Gene3D G3DSA:3.40.50.2300 170 332 9.6E-30 T 22-04-2016 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 PANTHER PTHR30146 1 335 3.3E-288 T 22-04-2016 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 SMART SM00354 1 73 7.1E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 326 1.2E-47 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 SUPERFAMILY SSF53822 69 333 5.44E-39 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 Gene3D G3DSA:1.10.260.40 1 50 6.2E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 2.2E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 PANTHER PTHR30146:SF36 1 335 3.3E-288 T 22-04-2016 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 Gene3D G3DSA:3.40.50.2300 51 169 4.5E-21 T 22-04-2016 YPTB_RS13200 480d606ac792f8eb5f3f72e9c1e2224c 347 SUPERFAMILY SSF47413 1 59 1.13E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS20945 b076721bcf07eee3a9103e40e371a766 108 Pfam PF14338 Mrr N-terminal domain 6 90 1.1E-21 T 22-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain YPTB_RS20945 b076721bcf07eee3a9103e40e371a766 108 PANTHER PTHR30015:SF4 2 98 1.3E-18 T 22-04-2016 YPTB_RS20945 b076721bcf07eee3a9103e40e371a766 108 PANTHER PTHR30015 2 98 1.3E-18 T 22-04-2016 YPTB_RS03185 b47a6efea8697c3824d284965f5c77c0 77 Pfam PF06305 Protein of unknown function (DUF1049) 22 71 3.1E-8 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 Gene3D G3DSA:3.30.70.20 30 117 1.0E-18 T 22-04-2016 YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 4.1E-52 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 4.6E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 27.161 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 PANTHER PTHR10849 8 180 1.7E-84 T 22-04-2016 YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 PANTHER PTHR10849:SF13 8 180 1.7E-84 T 22-04-2016 YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 SUPERFAMILY SSF54862 33 156 4.06E-29 T 22-04-2016 YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS14000 4cae8759424fe3d9adb72cf71209af88 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS06385 ae7e45946dbc6ca4f186dcc7e90f104b 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 5.6E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPTB_RS06385 ae7e45946dbc6ca4f186dcc7e90f104b 228 PANTHER PTHR30625:SF3 2 227 5.1E-80 T 22-04-2016 YPTB_RS06385 ae7e45946dbc6ca4f186dcc7e90f104b 228 PANTHER PTHR30625 2 227 5.1E-80 T 22-04-2016 YPTB_RS06385 ae7e45946dbc6ca4f186dcc7e90f104b 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 6.2E-94 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 YPTB_RS15270 8da7926aa16d62af5849f2fcd3734a99 169 SUPERFAMILY SSF89872 43 168 3.01E-51 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YPTB_RS15270 8da7926aa16d62af5849f2fcd3734a99 169 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 52 167 1.1E-49 T 22-04-2016 YPTB_RS15270 8da7926aa16d62af5849f2fcd3734a99 169 Gene3D G3DSA:3.40.1420.10 44 169 1.3E-56 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YPTB_RS15270 8da7926aa16d62af5849f2fcd3734a99 169 PIRSF PIRSF009103 15 169 5.2E-67 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 PANTHER PTHR11390:SF26 8 175 2.4E-93 T 22-04-2016 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 SUPERFAMILY SSF57783 9 47 1.09E-12 T 22-04-2016 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 PANTHER PTHR11390 8 175 2.4E-93 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 60 96 2.3E-17 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 102 140 7.0E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 11 47 2.9E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 Gene3D G3DSA:3.30.65.10 100 135 8.7E-7 T 22-04-2016 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 Gene3D G3DSA:3.30.65.10 12 47 5.5E-14 T 22-04-2016 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 Gene3D G3DSA:3.30.65.10 58 94 2.2E-15 T 22-04-2016 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 SUPERFAMILY SSF57783 99 136 6.29E-5 T 22-04-2016 YPTB_RS19835 86571b6545747ef119ece2133ce8e9dc 179 SUPERFAMILY SSF57783 58 96 9.52E-14 T 22-04-2016 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 SMART SM00433 35 625 1.4E-208 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 5.9E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PANTHER PTHR10169 1 630 0.0 T 22-04-2016 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 SMART SM00387 28 174 1.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 SUPERFAMILY SSF54211 218 383 3.03E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PANTHER PTHR10169:SF45 1 630 0.0 T 22-04-2016 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 SUPERFAMILY SSF56719 389 622 1.88E-77 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Pfam PF01751 Toprim domain 414 523 3.2E-12 T 22-04-2016 IPR006171 Toprim domain YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 SUPERFAMILY SSF55874 6 216 7.46E-69 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Gene3D G3DSA:3.30.565.10 16 216 1.4E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.068 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 3.6E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Pfam PF00204 DNA gyrase B 219 385 1.9E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Gene3D G3DSA:3.40.50.670 399 611 2.0E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPTB_RS18350 b9d289a7f0c62d18fb7cbfa18844e4b5 631 Gene3D G3DSA:3.30.230.10 218 391 3.8E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS15595 b041527537b65fcf9efd7e82da948961 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 1.3E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS15595 b041527537b65fcf9efd7e82da948961 86 SUPERFAMILY SSF54862 5 63 3.87E-17 T 22-04-2016 YPTB_RS15595 b041527537b65fcf9efd7e82da948961 86 Gene3D G3DSA:3.30.70.20 4 71 4.6E-16 T 22-04-2016 YPTB_RS15595 b041527537b65fcf9efd7e82da948961 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS15595 b041527537b65fcf9efd7e82da948961 86 PANTHER PTHR24960 1 85 8.2E-31 T 22-04-2016 YPTB_RS15595 b041527537b65fcf9efd7e82da948961 86 PANTHER PTHR24960:SF38 1 85 8.2E-31 T 22-04-2016 YPTB_RS09260 e55651cdf8800a3b40f4aa23bfb59ece 326 PANTHER PTHR30244:SF5 2 325 1.3E-101 T 22-04-2016 YPTB_RS09260 e55651cdf8800a3b40f4aa23bfb59ece 326 Gene3D G3DSA:1.20.1330.10 230 268 4.7E-19 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS09260 e55651cdf8800a3b40f4aa23bfb59ece 326 Gene3D G3DSA:1.20.1330.10 78 168 4.7E-19 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS09260 e55651cdf8800a3b40f4aa23bfb59ece 326 SUPERFAMILY SSF64518 2 324 2.48E-59 T 22-04-2016 YPTB_RS09260 e55651cdf8800a3b40f4aa23bfb59ece 326 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 198 1.1E-72 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 YPTB_RS09260 e55651cdf8800a3b40f4aa23bfb59ece 326 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 5.7E-24 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS09260 e55651cdf8800a3b40f4aa23bfb59ece 326 PANTHER PTHR30244 2 325 1.3E-101 T 22-04-2016 YPTB_RS07870 21c2fda9353a42003fd5132d5529c77f 297 SUPERFAMILY SSF56112 15 269 8.67E-17 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS07870 21c2fda9353a42003fd5132d5529c77f 297 Pfam PF03881 Fructosamine kinase 29 273 9.2E-8 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YPTB_RS08990 e670695b952b66b10ad4b4a2a1f0d6c7 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.828 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP YPTB_RS08990 e670695b952b66b10ad4b4a2a1f0d6c7 189 Pfam PF02659 Putative manganese efflux pump 31 181 1.1E-55 T 22-04-2016 IPR003810 Putative manganese efflux pump YPTB_RS08990 e670695b952b66b10ad4b4a2a1f0d6c7 189 PANTHER PTHR35529 2 188 8.4E-83 T 22-04-2016 YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 SUPERFAMILY SSF53383 8 397 8.64E-108 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 Gene3D G3DSA:3.90.1150.10 280 394 2.5E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 3.2E-237 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 PANTHER PTHR11601 1 401 0.0 T 22-04-2016 YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 PANTHER PTHR11601:SF44 1 401 0.0 T 22-04-2016 YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 Pfam PF00266 Aminotransferase class-V 22 388 5.2E-137 T 22-04-2016 IPR000192 Aminotransferase class V domain YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 Gene3D G3DSA:3.40.640.10 32 279 6.7E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS16335 b5d0b26fa74947fc06413508fab1abcf 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 SUPERFAMILY SSF55120 69 229 2.4E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 SMART SM00363 7 63 1.7E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 2.8E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 PANTHER PTHR21600 1 250 6.6E-139 T 22-04-2016 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 Pfam PF01479 S4 domain 8 52 7.7E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 SUPERFAMILY SSF55174 7 62 5.38E-12 T 22-04-2016 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 1.4E-51 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 Gene3D G3DSA:3.10.290.10 5 60 1.4E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS05835 172490250f4a4a090ebbdde3f64dfee9 290 PANTHER PTHR21600:SF24 1 250 6.6E-139 T 22-04-2016 YPTB_RS06805 f43f497355e75626542644509c0456f9 533 Gene3D G3DSA:1.25.10.10 122 229 6.5E-10 T 22-04-2016 IPR011989 Armadillo-like helical YPTB_RS06805 f43f497355e75626542644509c0456f9 533 PANTHER PTHR11795 168 533 3.8E-180 T 22-04-2016 YPTB_RS06805 f43f497355e75626542644509c0456f9 533 Pfam PF13646 HEAT repeats 176 230 9.0E-9 T 22-04-2016 YPTB_RS06805 f43f497355e75626542644509c0456f9 533 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 239 530 6.7E-129 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type YPTB_RS06805 f43f497355e75626542644509c0456f9 533 Pfam PF02653 Branched-chain amino acid transport system / permease component 241 516 1.5E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS06805 f43f497355e75626542644509c0456f9 533 SUPERFAMILY SSF48371 122 229 1.01E-11 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 YPTB_RS06805 f43f497355e75626542644509c0456f9 533 PANTHER PTHR11795:SF349 168 533 3.8E-180 T 22-04-2016 YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 PANTHER PTHR24220 1 238 3.0E-136 T 22-04-2016 YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 3 250 47.501 T 22-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 Gene3D G3DSA:3.40.50.300 16 233 3.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 PANTHER PTHR24220:SF547 1 238 3.0E-136 T 22-04-2016 YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 SMART SM00382 23 219 4.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 SUPERFAMILY SSF52540 14 228 3.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 Pfam PF00005 ABC transporter 17 163 9.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12705 c5fd870f9f9bda58514cf9cdfd294e7a 252 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 SUPERFAMILY SSF51735 141 305 8.16E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 Gene3D G3DSA:3.40.50.720 173 287 6.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.2E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 4.4E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 Gene3D G3DSA:3.90.180.10 1 172 5.9E-52 T 22-04-2016 IPR011032 GroES-like YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 SUPERFAMILY SSF50129 1 173 4.26E-54 T 22-04-2016 IPR011032 GroES-like YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 2.6E-183 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 SMART SM00829 12 338 1.6E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 PANTHER PTHR11695 13 341 1.4E-162 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.682 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 YPTB_RS00385 a7d4d9901802bc09e60e3f4fa3408a3d 341 PANTHER PTHR11695:SF285 13 341 1.4E-162 T 22-04-2016 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:2.40.240.10 462 547 1.5E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.1E-126 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451 7 247 7.9E-242 T 22-04-2016 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451 267 550 7.9E-242 T 22-04-2016 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.40.50.620 28 96 9.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.40.50.620 212 262 9.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 1.6E-62 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.90.800.10 101 209 1.1E-48 T 22-04-2016 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:1.10.1160.10 263 338 6.5E-39 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 SUPERFAMILY SSF52374 28 346 1.07E-101 T 22-04-2016 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:2.40.240.10 348 461 6.3E-49 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.715 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 SUPERFAMILY SSF50715 340 547 9.42E-80 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 0.0 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451:SF29 7 247 7.9E-242 T 22-04-2016 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451:SF29 267 550 7.9E-242 T 22-04-2016 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.9E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.9E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS06205 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.9E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 PANTHER PTHR24220 6 378 2.0E-149 T 22-04-2016 YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 SUPERFAMILY SSF52540 3 227 7.88E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 SMART SM00382 279 480 9.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 SMART SM00382 29 217 1.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 Pfam PF00005 ABC transporter 274 423 2.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 Pfam PF00005 ABC transporter 20 170 1.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 PANTHER PTHR24220:SF416 6 378 2.0E-149 T 22-04-2016 YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 SUPERFAMILY SSF52540 272 485 3.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 Gene3D G3DSA:3.40.50.300 259 487 5.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13770 e4c42d0a6f4a38b4bc10ceaef058cd2a 496 Gene3D G3DSA:3.40.50.300 2 228 1.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.40.50.740 621 668 9.5E-77 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.40.50.740 399 575 9.5E-77 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.40.50.740 96 178 9.5E-77 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:2.40.40.20 669 828 2.2E-45 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 SMART SM00926 39 93 1.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 PANTHER PTHR11615:SF123 39 284 0.0 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 PANTHER PTHR11615:SF123 643 828 0.0 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 PANTHER PTHR11615:SF123 345 596 0.0 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 PANTHER PTHR11615 39 284 0.0 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 PANTHER PTHR11615 643 828 0.0 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 PANTHER PTHR11615 345 596 0.0 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.4E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 24 1.9E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 SUPERFAMILY SSF53706 37 700 3.27E-201 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:2.20.25.90 38 95 9.2E-21 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 1.4E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Hamap MF_01630 Nitrate reductase [napA]. 1 828 29.829 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.40.228.10 179 291 5.2E-56 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.40.228.10 325 398 5.2E-56 T 22-04-2016 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 1.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF00384 Molybdopterin oxidoreductase 96 568 7.8E-89 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS14960 3987fa0b633faf259b085cf1f981d82a 830 SUPERFAMILY SSF50692 688 828 3.62E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS18455 51df37adbe29dac42b76cedd65403cda 216 SMART SM01207 10 185 2.0E-85 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPTB_RS18455 51df37adbe29dac42b76cedd65403cda 216 PANTHER PTHR30309 1 216 2.3E-113 T 22-04-2016 YPTB_RS18455 51df37adbe29dac42b76cedd65403cda 216 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.771 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPTB_RS18455 51df37adbe29dac42b76cedd65403cda 216 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.2E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPTB_RS18455 51df37adbe29dac42b76cedd65403cda 216 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 7.1E-81 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPTB_RS18455 51df37adbe29dac42b76cedd65403cda 216 PANTHER PTHR30309:SF0 1 216 2.3E-113 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.034 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 Gene3D G3DSA:3.90.1150.10 2 69 6.7E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 Gene3D G3DSA:3.90.1150.10 319 425 6.7E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 SUPERFAMILY SSF53383 2 425 2.45E-137 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 PANTHER PTHR11986 1 426 2.0E-241 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.4E-203 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 Gene3D G3DSA:3.40.640.10 70 315 3.3E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 Pfam PF00202 Aminotransferase class-III 32 398 5.1E-78 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS04135 44fdbde2ee95da47c452a8e951ed2be5 426 PANTHER PTHR11986:SF5 1 426 2.0E-241 T 22-04-2016 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PANTHER PTHR32176:SF0 4 438 4.2E-268 T 22-04-2016 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.4E-215 T 22-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.638 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 SUPERFAMILY SSF51658 4 438 1.6E-173 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 133 153 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 156 175 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 271 298 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 180 201 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 92 114 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 229 253 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 207 226 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 333 344 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 300 311 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 PANTHER PTHR32176 4 438 4.2E-268 T 22-04-2016 YPTB_RS21020 583b3c09d4cc9dbedf610ff3cf10e464 439 Gene3D G3DSA:3.20.20.150 3 439 8.9E-211 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS04550 f1386bea64e120ec4620cc059f50b9bc 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 1.5E-57 T 22-04-2016 IPR008136 CinA, C-terminal YPTB_RS04550 f1386bea64e120ec4620cc059f50b9bc 162 Pfam PF02464 Competence-damaged protein 8 158 1.4E-58 T 22-04-2016 IPR008136 CinA, C-terminal YPTB_RS04550 f1386bea64e120ec4620cc059f50b9bc 162 SUPERFAMILY SSF142433 6 159 2.09E-57 T 22-04-2016 IPR008136 CinA, C-terminal YPTB_RS04550 f1386bea64e120ec4620cc059f50b9bc 162 Gene3D G3DSA:3.90.950.20 5 159 3.4E-60 T 22-04-2016 IPR008136 CinA, C-terminal YPTB_RS04550 f1386bea64e120ec4620cc059f50b9bc 162 PANTHER PTHR13939 5 161 3.5E-78 T 22-04-2016 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 602 763 1.5E-37 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 853 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.1780.10 12 146 1.6E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 SMART SM00382 217 362 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 SMART SM00382 603 751 2.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF52540 552 834 3.23E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 637 655 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF52540 180 551 5.89E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 SMART SM01086 769 859 2.4E-4 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:3.40.50.300 559 778 1.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 333 8.6E-8 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 PANTHER PTHR11638:SF11 2 855 0.0 T 22-04-2016 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:3.40.50.300 182 361 3.1E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 625 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 714 728 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 670 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF81923 12 126 1.02E-9 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 PANTHER PTHR11638 2 855 0.0 T 22-04-2016 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 842 2.0E-8 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.8.60 363 447 3.3E-28 T 22-04-2016 YPTB_RS19625 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.8.60 779 859 3.7E-6 T 22-04-2016 YPTB_RS10115 4905f0c538de6af55563d8ca8e5a87dd 971 Pfam PF10145 Phage-related minor tail protein 245 435 4.8E-46 T 22-04-2016 IPR010090 Phage tail tape measure protein YPTB_RS10115 4905f0c538de6af55563d8ca8e5a87dd 971 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 200 544 6.3E-89 T 22-04-2016 IPR010090 Phage tail tape measure protein YPTB_RS08190 348a2b95c310e57d5dba996baf15a7fe 228 PANTHER PTHR38033 1 228 3.2E-99 T 22-04-2016 YPTB_RS08190 348a2b95c310e57d5dba996baf15a7fe 228 PANTHER PTHR38033:SF1 1 228 3.2E-99 T 22-04-2016 YPTB_RS08190 348a2b95c310e57d5dba996baf15a7fe 228 Pfam PF09850 Type VI secretion system protein DotU 14 215 1.8E-46 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS08190 348a2b95c310e57d5dba996baf15a7fe 228 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 3.1E-48 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 SMART SM01274 81 261 9.4E-110 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.084 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 Gene3D G3DSA:3.40.50.720 269 562 1.2E-108 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 SMART SM00919 271 531 5.4E-133 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 4.0E-101 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 SUPERFAMILY SSF51735 271 562 5.63E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PANTHER PTHR23406:SF25 1 565 0.0 T 22-04-2016 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 SUPERFAMILY SSF53223 6 270 4.89E-111 T 22-04-2016 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 183 205 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 242 260 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 408 424 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 87 111 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 147 176 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 298 314 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 267 283 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PIRSF PIRSF000106 3 563 3.8E-228 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 Gene3D G3DSA:3.40.50.10380 17 268 2.4E-117 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 PANTHER PTHR23406 1 565 0.0 T 22-04-2016 YPTB_RS08400 040fa337528b8e652c609859aca0e6ca 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 2.2E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 43.715 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 508 1.7E-217 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 Pfam PF00221 Aromatic amino acid lyase 11 470 2.0E-184 T 22-04-2016 IPR001106 Aromatic amino acid lyase YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 PANTHER PTHR10362 3 501 7.7E-262 T 22-04-2016 YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 Gene3D G3DSA:1.20.200.10 198 503 2.0E-124 T 22-04-2016 YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 Gene3D G3DSA:1.10.275.10 2 197 9.2E-75 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPTB_RS20820 7cf783a2e3e1523ddc6b005bcec5639d 510 SUPERFAMILY SSF48557 3 506 1.02E-190 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPTB_RS14780 503fbd35b94d4e411b449f3906d2e3c9 393 Gene3D G3DSA:3.90.1150.10 253 390 2.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS14780 503fbd35b94d4e411b449f3906d2e3c9 393 Gene3D G3DSA:3.40.640.10 46 252 2.6E-50 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS14780 503fbd35b94d4e411b449f3906d2e3c9 393 Pfam PF00155 Aminotransferase class I and II 59 381 1.8E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS14780 503fbd35b94d4e411b449f3906d2e3c9 393 PANTHER PTHR11751 4 386 3.3E-150 T 22-04-2016 YPTB_RS14780 503fbd35b94d4e411b449f3906d2e3c9 393 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 389 3.0E-148 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 YPTB_RS14780 503fbd35b94d4e411b449f3906d2e3c9 393 SUPERFAMILY SSF53383 1 390 2.04E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS14780 503fbd35b94d4e411b449f3906d2e3c9 393 PANTHER PTHR11751:SF422 4 386 3.3E-150 T 22-04-2016 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF47781 66 136 6.95E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 3.0E-67 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:1.10.8.10 159 201 1.1E-20 T 22-04-2016 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 Pfam PF01330 RuvA N terminal domain 2 62 3.9E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 Pfam PF07499 RuvA, C-terminal domain 160 202 1.0E-13 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 32.583 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF46929 159 202 5.36E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 SMART SM00278 73 92 0.054 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 SMART SM00278 108 127 0.15 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.8E-17 T 22-04-2016 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:2.40.50.140 2 64 1.0E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 PANTHER PTHR33796 2 202 1.1E-82 T 22-04-2016 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:1.10.150.20 67 138 1.5E-32 T 22-04-2016 YPTB_RS11185 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF50249 2 63 9.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 SUPERFAMILY SSF103473 16 200 3.27E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 SUPERFAMILY SSF103473 268 439 3.27E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 Pfam PF07690 Major Facilitator Superfamily 23 430 2.3E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 PANTHER PTHR23501:SF88 1 546 5.3E-234 T 22-04-2016 YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 PANTHER PTHR23501 1 546 5.3E-234 T 22-04-2016 YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 Gene3D G3DSA:1.20.1250.20 21 198 2.8E-20 T 22-04-2016 YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 Gene3D G3DSA:1.20.1250.20 290 441 5.6E-17 T 22-04-2016 YPTB_RS10640 0b6984d117f17763a181aa2688815128 546 Gene3D G3DSA:1.20.1250.20 505 530 5.6E-17 T 22-04-2016 YPTB_RS05290 33c1fab5e8c8dec04e7d3c303484f0a3 492 SUPERFAMILY SSF103473 6 407 6.93E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS05290 33c1fab5e8c8dec04e7d3c303484f0a3 492 Pfam PF07690 Major Facilitator Superfamily 18 366 2.2E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS05290 33c1fab5e8c8dec04e7d3c303484f0a3 492 Gene3D G3DSA:1.20.1250.20 14 198 9.8E-19 T 22-04-2016 YPTB_RS05290 33c1fab5e8c8dec04e7d3c303484f0a3 492 Gene3D G3DSA:1.20.1250.20 223 412 1.0E-13 T 22-04-2016 YPTB_RS05290 33c1fab5e8c8dec04e7d3c303484f0a3 492 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 4.0E-117 T 22-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 YPTB_RS05290 33c1fab5e8c8dec04e7d3c303484f0a3 492 PANTHER PTHR12778 3 404 1.4E-125 T 22-04-2016 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 PANTHER PTHR18966:SF237 24 253 2.9E-162 T 22-04-2016 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 SUPERFAMILY SSF53850 26 257 1.94E-63 T 22-04-2016 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 Gene3D G3DSA:3.40.190.10 116 212 1.8E-29 T 22-04-2016 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 253 1.2E-91 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 Gene3D G3DSA:3.40.190.10 215 257 7.8E-43 T 22-04-2016 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 Gene3D G3DSA:3.40.190.10 26 113 7.8E-43 T 22-04-2016 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 PANTHER PTHR18966 24 253 2.9E-162 T 22-04-2016 YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 8.3E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS14155 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 SMART SM00062 27 256 1.6E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 SUPERFAMILY SSF81338 11 259 8.11E-80 T 22-04-2016 IPR023271 Aquaporin-like YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PANTHER PTHR19139 12 279 1.6E-98 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PANTHER PTHR19139:SF100 12 279 1.6E-98 T 22-04-2016 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 Gene3D G3DSA:1.20.1080.10 7 260 1.6E-87 T 22-04-2016 IPR023271 Aquaporin-like YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 7.8E-73 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS00535 adf11d43f1c641ac0fa8f4e6857ef64f 282 Pfam PF00230 Major intrinsic protein 6 253 1.2E-71 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 Gene3D G3DSA:3.40.50.720 19 107 2.1E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 SUPERFAMILY SSF51735 101 284 2.15E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 284 1.4E-56 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 Gene3D G3DSA:3.40.50.720 108 285 8.6E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 311 2.9E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 PANTHER PTHR10996 34 314 1.9E-99 T 22-04-2016 YPTB_RS07305 f8cbda417e08929e98f4b31f2c0636f7 316 SUPERFAMILY SSF52283 1 121 1.0E-25 T 22-04-2016 YPTB_RS12030 f9e32ca136c8e229ed5614072562ffe1 316 PANTHER PTHR32196 30 308 5.4E-66 T 22-04-2016 YPTB_RS12030 f9e32ca136c8e229ed5614072562ffe1 316 SUPERFAMILY SSF53822 32 308 6.87E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS12030 f9e32ca136c8e229ed5614072562ffe1 316 Pfam PF13407 Periplasmic binding protein domain 32 285 8.2E-51 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS12030 f9e32ca136c8e229ed5614072562ffe1 316 Gene3D G3DSA:3.40.50.2300 32 146 9.6E-22 T 22-04-2016 YPTB_RS12030 f9e32ca136c8e229ed5614072562ffe1 316 PANTHER PTHR32196:SF9 30 308 5.4E-66 T 22-04-2016 YPTB_RS12030 f9e32ca136c8e229ed5614072562ffe1 316 Gene3D G3DSA:3.40.50.2300 147 308 9.2E-50 T 22-04-2016 YPTB_RS07910 2fc00771aa9aa904ce9578b54beb907f 215 SMART SM00849 12 192 5.6E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07910 2fc00771aa9aa904ce9578b54beb907f 215 SUPERFAMILY SSF56281 2 209 4.32E-61 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07910 2fc00771aa9aa904ce9578b54beb907f 215 Gene3D G3DSA:3.60.15.10 2 210 3.8E-65 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07910 2fc00771aa9aa904ce9578b54beb907f 215 PANTHER PTHR11935:SF115 1 214 2.8E-140 T 22-04-2016 YPTB_RS07910 2fc00771aa9aa904ce9578b54beb907f 215 PANTHER PTHR11935 1 214 2.8E-140 T 22-04-2016 YPTB_RS07910 2fc00771aa9aa904ce9578b54beb907f 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.2E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS01830 6b947e8cd8d083db0dfa235f45dab3aa 551 Pfam PF00474 Sodium:solute symporter family 64 470 7.3E-128 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS01830 6b947e8cd8d083db0dfa235f45dab3aa 551 PANTHER PTHR11819 33 540 4.4E-291 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS01830 6b947e8cd8d083db0dfa235f45dab3aa 551 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 2 551 50.869 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YPTB_RS01830 6b947e8cd8d083db0dfa235f45dab3aa 551 PANTHER PTHR11819:SF13 33 540 4.4E-291 T 22-04-2016 YPTB_RS01830 6b947e8cd8d083db0dfa235f45dab3aa 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS01830 6b947e8cd8d083db0dfa235f45dab3aa 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 551 0.0 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YPTB_RS01830 6b947e8cd8d083db0dfa235f45dab3aa 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 468 3.9E-63 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS14035 f37b80ecd176906fec926960d025c8bd 166 PANTHER PTHR11058:SF5 2 129 1.1E-74 T 22-04-2016 YPTB_RS14035 f37b80ecd176906fec926960d025c8bd 166 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.929 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 YPTB_RS14035 f37b80ecd176906fec926960d025c8bd 166 PANTHER PTHR11058 2 129 1.1E-74 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 YPTB_RS14035 f37b80ecd176906fec926960d025c8bd 166 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 29 125 3.2E-31 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 44 285 1.3E-47 T 22-04-2016 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 Gene3D G3DSA:3.40.190.10 53 131 3.0E-5 T 22-04-2016 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 305 5.0E-102 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 268 1.1E-84 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 PANTHER PTHR35841 4 306 4.4E-100 T 22-04-2016 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 PANTHER PTHR35841:SF1 4 306 4.4E-100 T 22-04-2016 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 SUPERFAMILY SSF53850 44 299 5.74E-45 T 22-04-2016 YPTB_RS06780 0d2e940f35e90320f1c908f5c8445874 309 Gene3D G3DSA:3.40.190.10 132 211 2.1E-8 T 22-04-2016 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 SMART SM00937 30 140 1.5E-55 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 Pfam PF03462 PCRF domain 2 164 5.3E-50 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 PANTHER PTHR11075:SF6 3 307 9.1E-153 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 Pfam PF00472 RF-1 domain 174 282 2.5E-39 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 PANTHER PTHR11075 3 307 9.1E-153 T 22-04-2016 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 Gene3D G3DSA:1.20.58.410 1 61 1.1E-13 T 22-04-2016 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 SUPERFAMILY SSF75620 1 309 1.44E-134 T 22-04-2016 YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 Gene3D G3DSA:3.30.160.20 172 250 6.3E-38 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPTB_RS17145 40bd4f236ba494537a8600d70815d5cc 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 1.5E-156 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 YPTB_RS20580 c85ee702d511a1216898b04ded8720e9 314 PANTHER PTHR32196 1 305 1.1E-162 T 22-04-2016 YPTB_RS20580 c85ee702d511a1216898b04ded8720e9 314 PANTHER PTHR32196:SF41 1 305 1.1E-162 T 22-04-2016 YPTB_RS20580 c85ee702d511a1216898b04ded8720e9 314 SUPERFAMILY SSF53822 7 308 3.53E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS20580 c85ee702d511a1216898b04ded8720e9 314 Gene3D G3DSA:3.40.50.2300 147 308 7.5E-45 T 22-04-2016 YPTB_RS20580 c85ee702d511a1216898b04ded8720e9 314 Gene3D G3DSA:3.40.50.2300 29 146 9.6E-38 T 22-04-2016 YPTB_RS20580 c85ee702d511a1216898b04ded8720e9 314 Pfam PF13407 Periplasmic binding protein domain 30 286 1.1E-55 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 Gene3D G3DSA:2.160.10.10 4 194 3.0E-46 T 22-04-2016 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.0E-107 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 SUPERFAMILY SSF51161 2 262 1.36E-76 T 22-04-2016 IPR011004 Trimeric LpxA-like YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 2.3E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 Gene3D G3DSA:1.20.1180.10 197 262 2.1E-26 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 PANTHER PTHR23416 1 254 1.3E-141 T 22-04-2016 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.7E-28 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 PANTHER PTHR23416:SF8 1 254 1.3E-141 T 22-04-2016 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 PIRSF PIRSF000456 4 262 2.1E-105 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS16195 be82f15e94e118d9b0e5b060f837ec00 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.811 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 PIRSF PIRSF029143 1 102 6.8E-49 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 Gene3D G3DSA:2.30.130.30 2 100 3.6E-44 T 22-04-2016 YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 SMART SM01022 5 101 3.1E-24 T 22-04-2016 IPR007374 ASCH domain YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 Pfam PF04266 ASCH domain 6 92 3.3E-13 T 22-04-2016 IPR007374 ASCH domain YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 31.61 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 PANTHER PTHR38088 1 102 1.4E-68 T 22-04-2016 YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 SUPERFAMILY SSF88697 2 100 5.3E-31 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS09110 8a771f8c88b18e4272932d4a91d6821f 102 PANTHER PTHR38088:SF2 1 102 1.4E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.2E-68 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.1E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 Gene3D G3DSA:3.50.50.60 152 271 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PANTHER PTHR22912:SF160 1 459 5.8E-274 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 Gene3D G3DSA:3.50.50.60 6 149 5.8E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 Gene3D G3DSA:3.50.50.60 272 335 5.8E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PIRSF PIRSF000350 1 468 1.6E-85 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 SUPERFAMILY SSF55424 343 466 5.84E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.2E-41 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.2E-41 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.2E-41 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.2E-41 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.2E-41 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 PANTHER PTHR22912 1 459 5.8E-274 T 22-04-2016 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 Gene3D G3DSA:3.30.390.30 336 462 3.9E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 SUPERFAMILY SSF51905 2 337 1.42E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS04000 ed8e9a1c365b4bd6493269c555d6d874 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 458 4.9E-149 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 YPTB_RS11255 22be9c7a9fae2741bf230cf90f43673a 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 1.8E-25 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS11255 22be9c7a9fae2741bf230cf90f43673a 114 Gene3D G3DSA:3.30.1330.40 6 114 1.6E-20 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS11255 22be9c7a9fae2741bf230cf90f43673a 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 22-04-2016 IPR019897 RidA, conserved site YPTB_RS11255 22be9c7a9fae2741bf230cf90f43673a 114 SUPERFAMILY SSF55298 2 114 1.32E-26 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS11255 22be9c7a9fae2741bf230cf90f43673a 114 PANTHER PTHR11803:SF11 1 114 3.5E-33 T 22-04-2016 YPTB_RS11255 22be9c7a9fae2741bf230cf90f43673a 114 PANTHER PTHR11803 1 114 3.5E-33 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 Gene3D G3DSA:3.30.230.10 14 170 1.1E-53 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 PANTHER PTHR20861:SF2 1 299 1.7E-111 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 SUPERFAMILY SSF55060 174 288 7.91E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 282 32.183 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 Gene3D G3DSA:3.30.70.890 174 288 1.3E-42 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 Pfam PF08544 GHMP kinases C terminal 216 267 1.0E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 PIRSF PIRSF010376 11 290 6.2E-85 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 287 3.3E-108 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 Pfam PF00288 GHMP kinases N terminal domain 98 155 1.8E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 SUPERFAMILY SSF54211 14 169 8.35E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS10980 108d7f133a3c1eb36ddfe3697551663c 299 PANTHER PTHR20861 1 299 1.7E-111 T 22-04-2016 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF47917 383 511 1.36E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 3.2E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:1.20.150.20 383 510 8.9E-49 T 22-04-2016 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.1E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF52540 96 381 1.32E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.3E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:3.40.50.300 94 382 3.2E-115 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.111 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.2E-261 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 PANTHER PTHR15184:SF3 1 496 4.0E-295 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS21420 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 PANTHER PTHR15184 1 496 4.0E-295 T 22-04-2016 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 PANTHER PTHR30251:SF9 15 273 2.5E-132 T 22-04-2016 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 Gene3D G3DSA:2.60.40.1070 175 269 4.1E-26 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS07380 75b2f67f489a700656698a647969b436 273 PANTHER PTHR30251 15 273 2.5E-132 T 22-04-2016 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 SUPERFAMILY SSF49584 167 269 2.35E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS07380 75b2f67f489a700656698a647969b436 273 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 195 265 3.9E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS07380 75b2f67f489a700656698a647969b436 273 Gene3D G3DSA:2.60.40.360 45 171 1.9E-36 T 22-04-2016 IPR008962 PapD-like YPTB_RS07380 75b2f67f489a700656698a647969b436 273 SUPERFAMILY SSF49354 41 172 5.79E-36 T 22-04-2016 IPR008962 PapD-like YPTB_RS07380 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 90 111 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 45 54 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 155 170 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 190 205 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 118 135 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS07380 75b2f67f489a700656698a647969b436 273 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 117 134 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS07380 75b2f67f489a700656698a647969b436 273 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 45 173 8.8E-37 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS15600 e38275486819938d23347e15bd44e79c 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 2.3E-37 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS15600 e38275486819938d23347e15bd44e79c 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 6.2E-27 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS15600 e38275486819938d23347e15bd44e79c 126 Gene3D G3DSA:3.90.470.20 1 125 1.1E-42 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS15600 e38275486819938d23347e15bd44e79c 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 2.0E-44 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS15600 e38275486819938d23347e15bd44e79c 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.562 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS15600 e38275486819938d23347e15bd44e79c 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 2.1E-53 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS15600 e38275486819938d23347e15bd44e79c 126 SUPERFAMILY SSF56214 3 125 1.7E-30 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS08255 9d3a6abf20ac503701baa6389a1786ac 533 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 230 490 2.8E-87 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPTB_RS08255 9d3a6abf20ac503701baa6389a1786ac 533 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 138 8.2E-20 T 22-04-2016 IPR010657 ImpA, N-terminal YPTB_RS08255 9d3a6abf20ac503701baa6389a1786ac 533 PANTHER PTHR37024 2 527 8.2E-245 T 22-04-2016 YPTB_RS08255 9d3a6abf20ac503701baa6389a1786ac 533 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 490 2.2E-112 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPTB_RS08255 9d3a6abf20ac503701baa6389a1786ac 533 PANTHER PTHR37024:SF1 2 527 8.2E-245 T 22-04-2016 YPTB_RS04080 e024b149bb26f3771bcf266800ee09e6 159 SUPERFAMILY SSF55083 1 158 6.54E-55 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS04080 e024b149bb26f3771bcf266800ee09e6 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS04080 e024b149bb26f3771bcf266800ee09e6 159 PANTHER PTHR20941 1 159 9.6E-80 T 22-04-2016 YPTB_RS04080 e024b149bb26f3771bcf266800ee09e6 159 Gene3D G3DSA:3.30.70.560 3 155 5.9E-59 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS04080 e024b149bb26f3771bcf266800ee09e6 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.4E-46 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS04080 e024b149bb26f3771bcf266800ee09e6 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.1E-36 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642:SF7 325 506 5.5E-223 T 22-04-2016 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642:SF7 25 301 5.5E-223 T 22-04-2016 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51338 2 183 4.54E-56 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 571 2.5E-283 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:3.20.20.140 150 434 1.4E-184 T 22-04-2016 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:3.20.20.140 493 570 1.4E-184 T 22-04-2016 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 Pfam PF01979 Amidohydrolase family 130 459 7.8E-70 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 53.489 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51556 486 571 5.11E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51556 135 437 5.11E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 ProSitePatterns PS00145 Urease active site. 322 338 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 7.7E-51 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642 325 506 5.5E-223 T 22-04-2016 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642 25 301 5.5E-223 T 22-04-2016 YPTB_RS15915 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:2.30.40.10 68 149 4.6E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 Pfam PF07729 FCD domain 99 226 9.0E-19 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 Gene3D G3DSA:1.10.10.10 7 76 5.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751 93 115 4.9E-50 T 22-04-2016 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751 1 77 4.9E-50 T 22-04-2016 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 SMART SM00895 99 227 3.3E-19 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 SUPERFAMILY SSF48008 95 235 1.12E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 SMART SM00345 15 74 1.6E-26 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751:SF355 93 115 4.9E-50 T 22-04-2016 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751:SF355 1 77 4.9E-50 T 22-04-2016 YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 Gene3D G3DSA:1.20.120.530 95 238 4.3E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS03985 a378cd4fd4c31ae6aa42a767bb20f654 254 SUPERFAMILY SSF46785 5 76 2.45E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17690 c62db3a333c73973694244004147e0d5 474 Gene3D G3DSA:1.20.1250.20 33 228 2.0E-8 T 22-04-2016 YPTB_RS17690 c62db3a333c73973694244004147e0d5 474 Gene3D G3DSA:1.20.1250.20 255 462 1.1E-8 T 22-04-2016 YPTB_RS17690 c62db3a333c73973694244004147e0d5 474 PANTHER PTHR11328:SF35 11 472 0.0 T 22-04-2016 YPTB_RS17690 c62db3a333c73973694244004147e0d5 474 PANTHER PTHR11328 11 472 0.0 T 22-04-2016 YPTB_RS17690 c62db3a333c73973694244004147e0d5 474 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 40 465 1.2E-107 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 YPTB_RS17690 c62db3a333c73973694244004147e0d5 474 Pfam PF13347 MFS/sugar transport protein 41 453 1.8E-77 T 22-04-2016 YPTB_RS17690 c62db3a333c73973694244004147e0d5 474 SUPERFAMILY SSF103473 34 450 3.4E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS11815 5f45afc9fe1783f5854f3dbed4a417d8 364 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 14 360 28.897 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YPTB_RS11815 5f45afc9fe1783f5854f3dbed4a417d8 364 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 19 359 1.5E-140 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YPTB_RS11815 5f45afc9fe1783f5854f3dbed4a417d8 364 Pfam PF03116 NQR2, RnfD, RnfE family 16 358 8.8E-109 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 YPTB_RS11815 5f45afc9fe1783f5854f3dbed4a417d8 364 PANTHER PTHR30578:SF0 14 364 4.6E-173 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YPTB_RS11815 5f45afc9fe1783f5854f3dbed4a417d8 364 PANTHER PTHR30578 14 364 4.6E-173 T 22-04-2016 YPTB_RS21340 3a1faeaa1df2c0f1cab04adee9143b7b 442 PANTHER PTHR11119:SF9 5 434 5.1E-182 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 YPTB_RS21340 3a1faeaa1df2c0f1cab04adee9143b7b 442 PIRSF PIRSF005353 3 442 5.8E-178 T 22-04-2016 IPR026033 Purine permease PbuG-like YPTB_RS21340 3a1faeaa1df2c0f1cab04adee9143b7b 442 Pfam PF00860 Permease family 29 402 9.3E-44 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS21340 3a1faeaa1df2c0f1cab04adee9143b7b 442 PANTHER PTHR11119 5 434 5.1E-182 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS04265 a71be42596138eedad6dad505875d81a 213 Gene3D G3DSA:3.40.50.300 18 212 3.3E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04265 a71be42596138eedad6dad505875d81a 213 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 38 209 38.138 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 YPTB_RS04265 a71be42596138eedad6dad505875d81a 213 Pfam PF01583 Adenylylsulphate kinase 39 191 1.8E-72 T 22-04-2016 YPTB_RS04265 a71be42596138eedad6dad505875d81a 213 SUPERFAMILY SSF52540 36 203 3.19E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04265 a71be42596138eedad6dad505875d81a 213 PANTHER PTHR11055 6 212 1.5E-139 T 22-04-2016 YPTB_RS04265 a71be42596138eedad6dad505875d81a 213 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 22 205 3.2E-86 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 YPTB_RS13810 670bc43e41fc261eb6f49edc08973467 165 PANTHER PTHR23091:SF210 1 165 4.6E-54 T 22-04-2016 YPTB_RS13810 670bc43e41fc261eb6f49edc08973467 165 SUPERFAMILY SSF55729 1 160 1.05E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS13810 670bc43e41fc261eb6f49edc08973467 165 Gene3D G3DSA:3.40.630.30 1 160 7.6E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS13810 670bc43e41fc261eb6f49edc08973467 165 PANTHER PTHR23091 1 165 4.6E-54 T 22-04-2016 YPTB_RS13810 670bc43e41fc261eb6f49edc08973467 165 Pfam PF13673 Acetyltransferase (GNAT) domain 37 136 7.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.90.1440.10 230 368 8.6E-47 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 416 618 1.06E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SMART SM00958 228 358 8.9E-85 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SMART SM00957 6 402 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.9E-69 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF02810 SEC-C motif 884 902 9.9E-11 T 22-04-2016 IPR004027 SEC-C motif YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF07517 SecA DEAD-like domain 7 402 1.0E-131 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.941 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.7E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 ProSitePatterns PS01312 SecA family signature. 500 515 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 417 619 4.0E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:1.10.3060.10 648 831 1.8E-59 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 368 415 1.93E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 5 228 1.93E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 2 228 9.0E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 369 416 9.0E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PANTHER PTHR30612 1 520 0.0 T 22-04-2016 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PANTHER PTHR30612 550 904 0.0 T 22-04-2016 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81886 880 892 3.66E-84 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81886 620 840 3.66E-84 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81767 227 368 6.8E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 339 361 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 63 87 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 170 190 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 101 115 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 413 426 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 117 127 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS03900 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 376 393 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 Pfam PF00308 Bacterial dnaA protein 18 214 1.5E-17 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 233 7.7E-85 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 PANTHER PTHR30050 6 234 1.1E-123 T 22-04-2016 YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 7 235 58.653 T 22-04-2016 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 SUPERFAMILY SSF52540 20 213 1.3E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 Gene3D G3DSA:1.10.8.60 169 234 1.3E-30 T 22-04-2016 YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 Gene3D G3DSA:3.40.50.300 4 166 1.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 PANTHER PTHR30050:SF5 6 234 1.1E-123 T 22-04-2016 YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 133 160 1.3E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB_RS15120 f1a1ab618d706c360410c5f197b0c2a5 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 45 65 1.3E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 Gene3D G3DSA:3.40.50.1100 96 175 8.2E-22 T 22-04-2016 YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 2.3E-50 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 1.3E-188 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 SUPERFAMILY SSF53686 4 389 2.1E-141 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 Gene3D G3DSA:3.40.50.1100 176 391 4.5E-92 T 22-04-2016 YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 PANTHER PTHR10314 6 395 1.8E-225 T 22-04-2016 YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.011 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 PANTHER PTHR10314:SF3 6 395 1.8E-225 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS11625 6722c1f6860f31831fad201c62bf1c37 396 PIRSF PIRSF001413 1 396 6.6E-170 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 PANTHER PTHR11986:SF71 7 413 0.0 T 22-04-2016 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 406 45.611 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 Pfam PF00202 Aminotransferase class-III 22 401 3.6E-122 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 Gene3D G3DSA:3.40.640.10 60 309 6.4E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 PANTHER PTHR11986 7 413 0.0 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 409 1.8E-225 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 SUPERFAMILY SSF53383 16 402 3.81E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 Gene3D G3DSA:3.90.1150.10 312 406 3.1E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 Gene3D G3DSA:3.90.1150.10 10 59 3.1E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 Hamap MF_01173 Succinylornithine transaminase [astC]. 3 414 76.493 T 22-04-2016 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81|UniPathway: UPA00185 YPTB_RS10750 d896980af1f54e147e9ef2e5750d87c9 414 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 403 2.4E-156 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Gene3D G3DSA:4.10.860.10 183 243 1.2E-20 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.4E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 SUPERFAMILY SSF46600 191 243 4.05E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 SMART SM00465 17 98 1.0E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 SUPERFAMILY SSF47781 521 609 4.13E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 SUPERFAMILY SSF82771 17 100 1.09E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 PANTHER PTHR30562:SF1 7 608 0.0 T 22-04-2016 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 3.9E-9 T 22-04-2016 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Pfam PF02151 UvrB/uvrC motif 205 237 2.1E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 6.3E-45 T 22-04-2016 IPR001162 UvrC family homology region YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Gene3D G3DSA:3.40.1440.10 17 97 6.2E-12 T 22-04-2016 IPR027299 GIY-YIG domain YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 PANTHER PTHR30562 7 608 0.0 T 22-04-2016 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 SMART SM00278 588 607 0.12 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 SMART SM00278 556 575 9.8 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Gene3D G3DSA:1.10.150.20 555 609 5.6E-23 T 22-04-2016 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.089 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 YPTB_RS09545 6abb215c777f6904f4fbfa80f494d6b6 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 589 8.5E-228 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 Gene3D G3DSA:1.10.10.10 7 88 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 Gene3D G3DSA:3.40.190.10 174 257 1.1E-5 T 22-04-2016 YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 PANTHER PTHR30126 1 306 3.0E-187 T 22-04-2016 YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 Gene3D G3DSA:3.40.190.10 89 173 9.2E-11 T 22-04-2016 YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 SUPERFAMILY SSF46785 7 88 9.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 SUPERFAMILY SSF53850 89 292 2.48E-31 T 22-04-2016 YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 Pfam PF03466 LysR substrate binding domain 88 291 1.4E-27 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS12535 ad642df9fc52055f65bd649c9c85bc2e 310 PANTHER PTHR30126:SF18 1 306 3.0E-187 T 22-04-2016 YPTB_RS08555 dfef2e2bdeb56263e9665e290027924b 258 Gene3D G3DSA:3.20.20.70 4 257 5.0E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS08555 dfef2e2bdeb56263e9665e290027924b 258 PANTHER PTHR21235:SF2 1 258 7.2E-119 T 22-04-2016 YPTB_RS08555 dfef2e2bdeb56263e9665e290027924b 258 Pfam PF00977 Histidine biosynthesis protein 5 239 7.0E-77 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 YPTB_RS08555 dfef2e2bdeb56263e9665e290027924b 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.6E-114 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 YPTB_RS08555 dfef2e2bdeb56263e9665e290027924b 258 PANTHER PTHR21235 1 258 7.2E-119 T 22-04-2016 YPTB_RS08555 dfef2e2bdeb56263e9665e290027924b 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.07 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 YPTB_RS08555 dfef2e2bdeb56263e9665e290027924b 258 SUPERFAMILY SSF51366 1 257 2.83E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 SUPERFAMILY SSF49584 166 241 3.66E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 236 1.3E-12 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 Gene3D G3DSA:2.60.40.360 26 149 1.5E-38 T 22-04-2016 IPR008962 PapD-like YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 149 1.3E-38 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 SUPERFAMILY SSF49354 21 148 4.19E-38 T 22-04-2016 IPR008962 PapD-like YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 PANTHER PTHR30251 1 243 3.7E-126 T 22-04-2016 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 PANTHER PTHR30251:SF8 1 243 3.7E-126 T 22-04-2016 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 Gene3D G3DSA:2.60.40.1070 166 240 4.2E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 PRINTS PR00969 Pili chaperone signature 168 183 2.8E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 PRINTS PR00969 Pili chaperone signature 76 97 2.8E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 PRINTS PR00969 Pili chaperone signature 27 36 2.8E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 PRINTS PR00969 Pili chaperone signature 104 121 2.8E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10545 bac4321dbdf5d593d673558d4e2498fb 243 PRINTS PR00969 Pili chaperone signature 130 145 2.8E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 PANTHER PTHR34273:SF2 1 405 3.0E-133 T 22-04-2016 YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 PANTHER PTHR34273 1 405 3.0E-133 T 22-04-2016 YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 407 213.811 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 SUPERFAMILY SSF56112 1 396 4.52E-90 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 Pfam PF01636 Phosphotransferase enzyme family 33 263 4.6E-14 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 Gene3D G3DSA:3.90.1200.10 96 270 3.6E-9 T 22-04-2016 YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 PIRSF PIRSF031134 1 400 4.2E-169 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 YPTB_RS04885 a28003762d60f628a2570807609e21f9 407 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 396 9.8E-160 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 Pfam PF00258 Flavodoxin 7 138 3.4E-28 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 PANTHER PTHR19384 1 146 8.4E-63 T 22-04-2016 YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 SUPERFAMILY SSF52218 1 146 2.86E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 PANTHER PTHR19384:SF81 1 146 8.4E-63 T 22-04-2016 YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 Gene3D G3DSA:3.40.50.360 1 146 1.4E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 82 92 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 5 18 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 51 62 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS00075 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 106 125 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 SUPERFAMILY SSF53067 6 254 3.33E-74 T 22-04-2016 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 Gene3D G3DSA:3.30.420.40 257 490 4.1E-74 T 22-04-2016 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 446 1.1E-48 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 Gene3D G3DSA:3.30.420.40 2 253 3.6E-80 T 22-04-2016 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 SUPERFAMILY SSF53067 257 490 5.29E-62 T 22-04-2016 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 PANTHER PTHR10196 1 491 2.1E-189 T 22-04-2016 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 PIRSF PIRSF000538 3 493 3.1E-128 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 1.2E-60 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS04530 a08814ad9069df6afd6bbb6e81cec7e5 495 PANTHER PTHR10196:SF9 1 491 2.1E-189 T 22-04-2016 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.3E-63 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 15 134 1.1E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 221 300 1.1E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 9.9E-133 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 PANTHER PTHR18919:SF5 10 436 9.3E-204 T 22-04-2016 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 SUPERFAMILY SSF53901 15 295 5.61E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 PIRSF PIRSF000429 9 436 5.7E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 9.7E-255 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.6E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 PANTHER PTHR18919 10 436 9.3E-204 T 22-04-2016 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 SUPERFAMILY SSF53901 297 435 5.43E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 174 220 1.8E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 302 436 1.8E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 69.81 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS14295 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.7E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 SUPERFAMILY SSF54913 1 112 2.13E-42 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 PANTHER PTHR30115 1 112 2.0E-83 T 22-04-2016 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 Gene3D G3DSA:3.30.70.120 1 112 4.3E-48 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 PANTHER PTHR30115:SF12 1 112 2.0E-83 T 22-04-2016 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 SMART SM00938 4 105 5.9E-61 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS05385 70eb157966fa0ccc6e1de75f03e8f716 112 PIRSF PIRSF039144 1 112 3.9E-53 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 3.3E-33 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 7.9E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 PIRSF PIRSF004669 1 89 1.5E-32 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 PANTHER PTHR34040 1 89 1.0E-35 T 22-04-2016 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.5E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.5E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.5E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS09310 92b4e8651b29e0425f30e0652f3a0dd6 89 PANTHER PTHR34040:SF2 1 89 1.0E-35 T 22-04-2016 YPTB_RS04500 bb8ded5722238a97001ede58d96f8f27 313 PANTHER PTHR32196 29 285 4.1E-83 T 22-04-2016 YPTB_RS04500 bb8ded5722238a97001ede58d96f8f27 313 Pfam PF13407 Periplasmic binding protein domain 29 284 5.9E-58 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS04500 bb8ded5722238a97001ede58d96f8f27 313 Gene3D G3DSA:3.40.50.2300 144 305 9.4E-49 T 22-04-2016 YPTB_RS04500 bb8ded5722238a97001ede58d96f8f27 313 SUPERFAMILY SSF53822 28 305 3.68E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS04500 bb8ded5722238a97001ede58d96f8f27 313 Gene3D G3DSA:3.40.50.2300 27 143 8.6E-35 T 22-04-2016 YPTB_RS04500 bb8ded5722238a97001ede58d96f8f27 313 PANTHER PTHR32196:SF9 29 285 4.1E-83 T 22-04-2016 YPTB_RS06860 4de5edd6c820991386964aab8bf05bde 444 PANTHER PTHR11785 5 444 1.7E-190 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS06860 4de5edd6c820991386964aab8bf05bde 444 PIRSF PIRSF006060 1 431 5.8E-62 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS06860 4de5edd6c820991386964aab8bf05bde 444 Pfam PF13520 Amino acid permease 10 401 1.9E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS06860 4de5edd6c820991386964aab8bf05bde 444 PANTHER PTHR11785:SF259 5 444 1.7E-190 T 22-04-2016 YPTB_RS07405 b6fe9c8225165a59c033ffa61780e270 503 PIRSF PIRSF006060 3 495 1.3E-82 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS07405 b6fe9c8225165a59c033ffa61780e270 503 Pfam PF00324 Amino acid permease 25 478 5.2E-143 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS07405 b6fe9c8225165a59c033ffa61780e270 503 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS07405 b6fe9c8225165a59c033ffa61780e270 503 PANTHER PTHR11785:SF204 11 503 1.0E-239 T 22-04-2016 YPTB_RS07405 b6fe9c8225165a59c033ffa61780e270 503 PANTHER PTHR11785 11 503 1.0E-239 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 Gene3D G3DSA:1.10.10.10 10 87 2.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 PANTHER PTHR30419 107 411 1.1E-159 T 22-04-2016 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 SUPERFAMILY SSF53850 199 407 1.54E-33 T 22-04-2016 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 Pfam PF03466 LysR substrate binding domain 197 404 4.0E-28 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 Gene3D G3DSA:3.40.190.10 288 367 1.7E-8 T 22-04-2016 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 Gene3D G3DSA:1.10.10.10 112 191 2.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 Gene3D G3DSA:3.40.190.10 199 287 3.0E-14 T 22-04-2016 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 SUPERFAMILY SSF46785 110 190 6.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 PANTHER PTHR30419:SF10 107 411 1.1E-159 T 22-04-2016 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 114 171 1.2E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 5.0E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00500 a62a92906d7e232357afd096f97e52c9 411 SUPERFAMILY SSF46785 10 88 9.58E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 Gene3D G3DSA:3.40.50.300 10 316 1.8E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 PIRSF PIRSF000545 1 316 5.1E-148 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285 278 316 2.7E-174 T 22-04-2016 YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285 1 262 2.7E-174 T 22-04-2016 YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 9.0E-170 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 SUPERFAMILY SSF52540 10 315 1.49E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 188.755 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285:SF7 278 316 2.7E-174 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285:SF7 1 262 2.7E-174 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPTB_RS01615 1a5cbc0702113c26a2f389f0a9bd97bb 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 5.7E-16 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 PANTHER PTHR10353:SF35 1 478 3.7E-234 T 22-04-2016 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 6.1E-128 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 PANTHER PTHR10353 1 478 3.7E-234 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 SUPERFAMILY SSF51445 2 471 2.05E-160 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS07140 a74fc7c873f3ee79ed6daf78115e2870 478 Gene3D G3DSA:3.20.20.80 5 476 1.6E-148 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 Gene3D G3DSA:1.20.1250.20 13 182 2.3E-24 T 22-04-2016 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 Gene3D G3DSA:1.20.1250.20 257 454 1.5E-15 T 22-04-2016 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 5.8E-7 T 22-04-2016 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 5.8E-7 T 22-04-2016 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 5.8E-7 T 22-04-2016 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 5.8E-7 T 22-04-2016 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 Pfam PF07690 Major Facilitator Superfamily 16 405 5.7E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 PANTHER PTHR23501 1 472 0.0 T 22-04-2016 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 414 1.6E-71 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 SUPERFAMILY SSF103473 13 194 6.67E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 SUPERFAMILY SSF103473 244 452 6.67E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS00120 1ffce76e3e947ba91b29058f74b16c2b 474 PANTHER PTHR23501:SF1 1 472 0.0 T 22-04-2016 YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 Gene3D G3DSA:3.40.190.10 95 183 4.7E-17 T 22-04-2016 YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 Gene3D G3DSA:1.10.10.10 4 83 3.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 Gene3D G3DSA:3.40.190.10 184 267 2.2E-21 T 22-04-2016 YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 PANTHER PTHR30427 2 312 1.4E-148 T 22-04-2016 YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 Pfam PF03466 LysR substrate binding domain 93 297 7.3E-37 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.4E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 SUPERFAMILY SSF53850 95 298 5.27E-38 T 22-04-2016 YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 SUPERFAMILY SSF46785 3 84 1.36E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16500 c7e1e027e8878b8a5f589dd777285b03 313 PANTHER PTHR30427:SF1 2 312 1.4E-148 T 22-04-2016 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 332 2.2E-104 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 86.794 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 Gene3D G3DSA:3.30.43.10 7 70 4.9E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 5.8E-36 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 Pfam PF01565 FAD binding domain 22 153 1.7E-24 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 PANTHER PTHR21071:SF6 7 340 4.7E-197 T 22-04-2016 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 Gene3D G3DSA:3.90.78.10 233 343 6.8E-45 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 Gene3D G3DSA:3.30.465.10 74 232 3.0E-53 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 SUPERFAMILY SSF56176 7 194 1.45E-43 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 PANTHER PTHR21071 7 340 4.7E-197 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS01605 71e0bdf8546051a3bf191320536fac32 345 SUPERFAMILY SSF56194 205 342 7.19E-52 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS04440 a9281168d9362c99f13491e8dd5841de 329 PANTHER PTHR32196:SF35 3 323 1.0E-142 T 22-04-2016 YPTB_RS04440 a9281168d9362c99f13491e8dd5841de 329 PANTHER PTHR32196 3 323 1.0E-142 T 22-04-2016 YPTB_RS04440 a9281168d9362c99f13491e8dd5841de 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 5.8E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS05200 1f1db598d4494f6f2a39094d59d20aa0 138 Pfam PF01029 NusB family 7 131 4.5E-37 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPTB_RS05200 1f1db598d4494f6f2a39094d59d20aa0 138 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 24.26 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YPTB_RS05200 1f1db598d4494f6f2a39094d59d20aa0 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 4.7E-47 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YPTB_RS05200 1f1db598d4494f6f2a39094d59d20aa0 138 SUPERFAMILY SSF48013 3 135 2.49E-44 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPTB_RS05200 1f1db598d4494f6f2a39094d59d20aa0 138 Gene3D G3DSA:1.10.940.10 3 136 6.2E-48 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPTB_RS05200 1f1db598d4494f6f2a39094d59d20aa0 138 PANTHER PTHR11078 1 138 1.9E-57 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 7.6E-135 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PANTHER PTHR11735:SF6 1 336 2.2E-168 T 22-04-2016 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 Pfam PF00814 Glycoprotease family 24 307 1.0E-102 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.855 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 SUPERFAMILY SSF53067 1 309 3.74E-43 T 22-04-2016 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 PANTHER PTHR11735 1 336 2.2E-168 T 22-04-2016 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 4.1E-126 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 Gene3D G3DSA:3.30.420.40 1 159 2.5E-49 T 22-04-2016 YPTB_RS18460 00235c745d8298a44729e9f9ec274d28 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS10600 f0b2760d2919d73852250cf779bbf88b 289 PANTHER PTHR35563 1 289 1.6E-82 T 22-04-2016 YPTB_RS10600 f0b2760d2919d73852250cf779bbf88b 289 PANTHER PTHR35563:SF1 1 289 1.6E-82 T 22-04-2016 YPTB_RS10600 f0b2760d2919d73852250cf779bbf88b 289 SUPERFAMILY SSF51556 22 289 8.51E-79 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS10600 f0b2760d2919d73852250cf779bbf88b 289 Pfam PF04909 Amidohydrolase 27 289 4.7E-48 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPTB_RS10600 f0b2760d2919d73852250cf779bbf88b 289 Gene3D G3DSA:3.20.20.140 16 289 3.9E-94 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 SUPERFAMILY SSF55031 212 322 2.72E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 SUPERFAMILY SSF53187 7 213 2.25E-72 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 SUPERFAMILY SSF53187 325 407 2.25E-72 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 Gene3D G3DSA:3.30.70.360 213 322 1.8E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 PANTHER PTHR11014:SF3 4 95 1.3E-169 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 PANTHER PTHR11014:SF3 135 409 1.3E-169 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 Pfam PF01546 Peptidase family M20/M25/M40 143 400 2.0E-10 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 Gene3D G3DSA:3.40.630.10 6 212 3.8E-97 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 Gene3D G3DSA:3.40.630.10 325 408 3.8E-97 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 Pfam PF07687 Peptidase dimerisation domain 209 309 1.8E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 PANTHER PTHR11014 4 95 1.3E-169 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 PANTHER PTHR11014 135 409 1.3E-169 T 22-04-2016 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 PIRSF PIRSF037215 4 410 5.0E-158 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPTB_RS17855 2c8cce8ac3bf825f64ad5d2750a2420f 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 7 398 1.1E-101 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPTB_RS15265 78fcc64ac641f79be1c58d6082259c98 296 PANTHER PTHR12358 2 294 3.0E-69 T 22-04-2016 YPTB_RS15265 78fcc64ac641f79be1c58d6082259c98 296 SUPERFAMILY SSF111331 1 293 4.58E-69 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain YPTB_RS15265 78fcc64ac641f79be1c58d6082259c98 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 8.0E-27 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YPTB_RS15265 78fcc64ac641f79be1c58d6082259c98 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 290 3.7E-92 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase YPTB_RS15265 78fcc64ac641f79be1c58d6082259c98 296 SMART SM00046 3 129 5.4E-17 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YPTB_RS15265 78fcc64ac641f79be1c58d6082259c98 296 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 3 295 9.6E-152 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YPTB_RS15265 78fcc64ac641f79be1c58d6082259c98 296 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 1 296 50.293 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 Pfam PF08482 ATP-dependent helicase C-terminal 706 838 2.4E-53 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 Gene3D G3DSA:3.40.50.300 38 199 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 38 850 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 Gene3D G3DSA:3.40.50.300 240 386 1.5E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 SMART SM00847 427 518 1.0E-15 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 PIRSF PIRSF005496 33 852 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 SUPERFAMILY SSF52540 51 378 2.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 SMART SM00487 36 225 9.7E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 Pfam PF00270 DEAD/DEAH box helicase 48 201 3.6E-11 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 SMART SM00490 262 367 2.6E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 PANTHER PTHR18934 38 468 8.1E-162 T 22-04-2016 YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 Pfam PF00271 Helicase conserved C-terminal domain 244 366 7.5E-12 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS04110 ccb7a686515da459f7c0e5836a5cc815 853 Pfam PF04408 Helicase associated domain (HA2) 428 482 1.7E-12 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPTB_RS00595 0d8dc5858c24909590bd7da36987bcda 281 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 275 1.7E-73 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 YPTB_RS00595 0d8dc5858c24909590bd7da36987bcda 281 SUPERFAMILY SSF110997 207 276 4.05E-22 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS00595 0d8dc5858c24909590bd7da36987bcda 281 PANTHER PTHR11064 78 281 4.2E-78 T 22-04-2016 YPTB_RS00595 0d8dc5858c24909590bd7da36987bcda 281 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 281 36.683 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 YPTB_RS00595 0d8dc5858c24909590bd7da36987bcda 281 Pfam PF05036 Sporulation related domain 207 275 2.1E-19 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS00595 0d8dc5858c24909590bd7da36987bcda 281 Gene3D G3DSA:3.30.70.1070 202 276 4.1E-30 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS00595 0d8dc5858c24909590bd7da36987bcda 281 PANTHER PTHR11064:SF39 78 281 4.2E-78 T 22-04-2016 YPTB_RS19000 b0ecdea66e6b0863f31fe19c42a16941 375 PANTHER PTHR12169 1 375 4.4E-211 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 YPTB_RS19000 b0ecdea66e6b0863f31fe19c42a16941 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.031 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 YPTB_RS19000 b0ecdea66e6b0863f31fe19c42a16941 375 SUPERFAMILY SSF52540 68 210 1.58E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19000 b0ecdea66e6b0863f31fe19c42a16941 375 PANTHER PTHR12169:SF11 1 375 4.4E-211 T 22-04-2016 YPTB_RS19000 b0ecdea66e6b0863f31fe19c42a16941 375 Pfam PF03969 AFG1-like ATPase 6 370 4.8E-148 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 YPTB_RS19000 b0ecdea66e6b0863f31fe19c42a16941 375 Gene3D G3DSA:3.40.50.300 17 182 5.7E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02610 7d38206f9287b25ac9b17ec19e539a06 175 SUPERFAMILY SSF50324 3 175 4.45E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPTB_RS02610 7d38206f9287b25ac9b17ec19e539a06 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.0E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPTB_RS02610 7d38206f9287b25ac9b17ec19e539a06 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.024 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPTB_RS02610 7d38206f9287b25ac9b17ec19e539a06 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPTB_RS02610 7d38206f9287b25ac9b17ec19e539a06 175 Gene3D G3DSA:3.90.80.10 4 174 1.2E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPTB_RS02610 7d38206f9287b25ac9b17ec19e539a06 175 PANTHER PTHR10286 6 175 4.5E-80 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPTB_RS02985 d32e8c335cbcaa0909c41e775bef9634 152 SUPERFAMILY SSF51197 1 151 2.0E-44 T 22-04-2016 YPTB_RS02985 d32e8c335cbcaa0909c41e775bef9634 152 Pfam PF04074 Domain of unknown function (DUF386) 1 149 7.0E-45 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS02985 d32e8c335cbcaa0909c41e775bef9634 152 PANTHER PTHR34986:SF1 2 152 4.2E-82 T 22-04-2016 YPTB_RS02985 d32e8c335cbcaa0909c41e775bef9634 152 Gene3D G3DSA:2.60.120.370 1 151 1.4E-50 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS02985 d32e8c335cbcaa0909c41e775bef9634 152 PANTHER PTHR34986 2 152 4.2E-82 T 22-04-2016 YPTB_RS02985 d32e8c335cbcaa0909c41e775bef9634 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 4.8E-52 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 Gene3D G3DSA:1.10.760.10 319 455 4.1E-46 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 PANTHER PTHR30600:SF7 44 459 6.2E-197 T 22-04-2016 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 PANTHER PTHR30600 44 459 6.2E-197 T 22-04-2016 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 SMART SM01235 14 151 2.8E-49 T 22-04-2016 IPR025992 Haem-binding domain YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 SUPERFAMILY SSF46626 165 315 1.26E-46 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 Pfam PF00034 Cytochrome c 335 451 6.5E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 Pfam PF03150 Di-haem cytochrome c peroxidase 180 327 1.7E-49 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 Gene3D G3DSA:1.10.760.10 170 318 1.1E-50 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 SUPERFAMILY SSF46626 316 455 2.01E-37 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS04385 f32c6fd55393d600798bfa5cf16806a3 459 Pfam PF14376 Haem-binding domain 17 148 9.6E-33 T 22-04-2016 IPR025992 Haem-binding domain YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 SUPERFAMILY SSF51735 435 685 4.14E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 Gene3D G3DSA:3.40.50.720 432 684 2.8E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 441 458 1.3E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 586 605 1.3E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 607 624 1.3E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 512 523 1.3E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PANTHER PTHR24322:SF639 586 615 2.4E-44 T 22-04-2016 YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PANTHER PTHR24322:SF639 444 570 2.4E-44 T 22-04-2016 YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 Gene3D G3DSA:3.40.225.10 31 231 6.9E-30 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 SMART SM01007 28 227 1.2E-29 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 224 3.0E-23 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 573 601 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PANTHER PTHR24322 586 615 2.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 PANTHER PTHR24322 444 570 2.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 SUPERFAMILY SSF53639 26 228 2.35E-33 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS09270 e138f690162d08117434151c670e0a9c 688 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 446 681 1.1E-41 T 22-04-2016 YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 PANTHER PTHR24220 12 241 1.0E-104 T 22-04-2016 YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 Gene3D G3DSA:3.40.50.300 10 241 8.7E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 Pfam PF12704 MacB-like periplasmic core domain 302 519 6.1E-39 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 Pfam PF00005 ABC transporter 30 178 3.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 SUPERFAMILY SSF52540 10 241 2.13E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 SMART SM00382 39 226 2.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 Pfam PF02687 FtsX-like permease family 557 671 3.6E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS14755 c3d461541e39239791d8a3814b7054dd 678 PANTHER PTHR24220:SF86 12 241 1.0E-104 T 22-04-2016 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 50.049 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 Pfam PF01676 Metalloenzyme superfamily 6 501 2.5E-81 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 PANTHER PTHR31637:SF0 1 515 1.9E-296 T 22-04-2016 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 Gene3D G3DSA:3.40.1450.10 80 311 2.2E-97 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 1.4E-82 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 SUPERFAMILY SSF64158 79 311 9.94E-86 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 Gene3D G3DSA:3.40.720.10 316 511 3.8E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 Gene3D G3DSA:3.40.720.10 5 79 3.8E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 PIRSF PIRSF001492 1 515 2.6E-205 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 SUPERFAMILY SSF53649 5 79 6.94E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 SUPERFAMILY SSF53649 312 511 6.94E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 PANTHER PTHR31637 1 515 1.9E-296 T 22-04-2016 YPTB_RS00400 4f6748cb20d6c82e8be7e13c1dd84c07 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 2.7E-238 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPTB_RS05825 580a194b4f34d41491efdfa024a3f24d 176 Pfam PF14345 GDYXXLXY protein 16 165 3.0E-35 T 22-04-2016 IPR025833 GDYXXLXY protein YPTB_RS05365 19b90137ec93a9e5165669fe34893ab2 346 PANTHER PTHR10314 1 345 3.1E-209 T 22-04-2016 YPTB_RS05365 19b90137ec93a9e5165669fe34893ab2 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 314 1.3E-45 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS05365 19b90137ec93a9e5165669fe34893ab2 346 PANTHER PTHR10314:SF126 1 345 3.1E-209 T 22-04-2016 YPTB_RS05365 19b90137ec93a9e5165669fe34893ab2 346 Gene3D G3DSA:3.40.50.1100 46 140 8.4E-22 T 22-04-2016 YPTB_RS05365 19b90137ec93a9e5165669fe34893ab2 346 Gene3D G3DSA:3.40.50.1100 141 331 4.3E-41 T 22-04-2016 YPTB_RS05365 19b90137ec93a9e5165669fe34893ab2 346 SUPERFAMILY SSF53686 21 334 1.31E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 Gene3D G3DSA:3.40.1140.10 1 226 2.7E-52 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 SUPERFAMILY SSF52540 21 55 3.55E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 847 878 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 981 1116 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 560 814 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 1426 1459 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 99 426 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 897 938 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 444 529 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 1212 1248 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 1.0E-14 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 SUPERFAMILY SSF52540 22 224 3.36E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 Pfam PF04310 MukB N-terminal 2 227 1.7E-123 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.061 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 Gene3D G3DSA:1.10.287.370 989 1111 4.0E-5 T 22-04-2016 IPR009053 Prefoldin YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 847 878 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 981 1116 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 560 814 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 1426 1459 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 99 426 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 897 938 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 444 529 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 1212 1248 0.0 T 22-04-2016 YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 SUPERFAMILY SSF52540 1268 1433 3.55E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 Pfam PF16330 MukB hinge domain 645 810 1.7E-73 T 22-04-2016 IPR032520 MukB, hinge domain YPTB_RS07895 803546559cebb42a88a145358ddb2182 1485 PIRSF PIRSF005246 1 1483 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YPTB_RS19830 f151b14fb5936779bf5b47ff4944e129 190 SUPERFAMILY SSF55821 10 186 5.8E-54 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPTB_RS19830 f151b14fb5936779bf5b47ff4944e129 190 Gene3D G3DSA:3.90.870.10 3 190 8.1E-53 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPTB_RS19830 f151b14fb5936779bf5b47ff4944e129 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.278 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 YPTB_RS19830 f151b14fb5936779bf5b47ff4944e129 190 PANTHER PTHR17490 1 185 1.3E-116 T 22-04-2016 YPTB_RS19830 f151b14fb5936779bf5b47ff4944e129 190 Pfam PF01300 Telomere recombination 16 182 3.0E-42 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YPTB_RS19830 f151b14fb5936779bf5b47ff4944e129 190 PANTHER PTHR17490:SF8 1 185 1.3E-116 T 22-04-2016 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 31 413 2.6E-115 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 PANTHER PTHR32494:SF5 16 423 4.1E-182 T 22-04-2016 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 Gene3D G3DSA:3.30.70.360 233 329 2.8E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 Gene3D G3DSA:3.40.630.10 358 414 2.6E-103 T 22-04-2016 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 Gene3D G3DSA:3.40.630.10 15 232 2.6E-103 T 22-04-2016 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 PIRSF PIRSF001235 9 418 4.9E-131 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 PANTHER PTHR32494 16 423 4.1E-182 T 22-04-2016 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 SUPERFAMILY SSF55031 220 334 2.99E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 Pfam PF01546 Peptidase family M20/M25/M40 84 412 1.8E-26 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 SUPERFAMILY SSF53187 343 413 1.03E-80 T 22-04-2016 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 SUPERFAMILY SSF53187 18 230 1.03E-80 T 22-04-2016 YPTB_RS04850 d09e4bd064e69255b438fadf8a2dc4b4 427 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 83 92 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPTB_RS08485 fd736c5cb75bfe75c198444dcd7786ba 192 PANTHER PTHR31438 1 192 5.2E-64 T 22-04-2016 YPTB_RS08485 fd736c5cb75bfe75c198444dcd7786ba 192 Pfam PF13523 Acetyltransferase (GNAT) domain 26 167 9.2E-45 T 22-04-2016 YPTB_RS08485 fd736c5cb75bfe75c198444dcd7786ba 192 Gene3D G3DSA:3.40.630.30 15 183 4.3E-51 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS08485 fd736c5cb75bfe75c198444dcd7786ba 192 SUPERFAMILY SSF55729 15 181 3.65E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS08485 fd736c5cb75bfe75c198444dcd7786ba 192 SMART SM01006 21 70 1.1E-9 T 22-04-2016 IPR019432 Siderophore biosynthesis protein, conserved domain YPTB_RS01415 61346d1e2643c3da3d18fac8b0e88ee6 281 Gene3D G3DSA:1.10.3720.10 4 270 4.6E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS01415 61346d1e2643c3da3d18fac8b0e88ee6 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 2.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS01415 61346d1e2643c3da3d18fac8b0e88ee6 281 PANTHER PTHR32243:SF31 1 279 5.9E-145 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 YPTB_RS01415 61346d1e2643c3da3d18fac8b0e88ee6 281 PANTHER PTHR32243 1 279 5.9E-145 T 22-04-2016 YPTB_RS01415 61346d1e2643c3da3d18fac8b0e88ee6 281 SUPERFAMILY SSF161098 4 277 1.15E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13925 02878d1b513bf1d506663def07295176 171 PANTHER PTHR28255 1 164 1.4E-56 T 22-04-2016 YPTB_RS13925 02878d1b513bf1d506663def07295176 171 PIRSF PIRSF008757 1 164 1.3E-61 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 YPTB_RS13925 02878d1b513bf1d506663def07295176 171 Pfam PF03928 Haem-degrading 22 147 3.9E-26 T 22-04-2016 IPR005624 Haem-degrading YPTB_RS13925 02878d1b513bf1d506663def07295176 171 Hamap MF_00761 UPF0303 protein . 2 155 34.769 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 YPTB_RS13925 02878d1b513bf1d506663def07295176 171 SUPERFAMILY SSF143744 14 152 3.79E-23 T 22-04-2016 YPTB_RS13925 02878d1b513bf1d506663def07295176 171 PANTHER PTHR28255:SF1 1 164 1.4E-56 T 22-04-2016 YPTB_RS00720 37a0791301954147900744c5716effe7 305 Gene3D G3DSA:1.10.10.10 1 82 1.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00720 37a0791301954147900744c5716effe7 305 Gene3D G3DSA:3.40.190.10 176 267 1.2E-35 T 22-04-2016 YPTB_RS00720 37a0791301954147900744c5716effe7 305 SUPERFAMILY SSF46785 1 110 5.14E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00720 37a0791301954147900744c5716effe7 305 PANTHER PTHR30346:SF15 1 305 7.4E-150 T 22-04-2016 YPTB_RS00720 37a0791301954147900744c5716effe7 305 SUPERFAMILY SSF53850 89 297 2.17E-45 T 22-04-2016 YPTB_RS00720 37a0791301954147900744c5716effe7 305 PANTHER PTHR30346 1 305 7.4E-150 T 22-04-2016 YPTB_RS00720 37a0791301954147900744c5716effe7 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00720 37a0791301954147900744c5716effe7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00720 37a0791301954147900744c5716effe7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00720 37a0791301954147900744c5716effe7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00720 37a0791301954147900744c5716effe7 305 Pfam PF03466 LysR substrate binding domain 88 293 3.3E-51 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS00720 37a0791301954147900744c5716effe7 305 Gene3D G3DSA:3.40.190.10 90 175 7.2E-19 T 22-04-2016 YPTB_RS14260 eac5bc96c2d4f2997a6e5ccd095d02cd 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 6.8E-45 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YPTB_RS14260 eac5bc96c2d4f2997a6e5ccd095d02cd 268 PANTHER PTHR30269:SF0 6 258 1.7E-117 T 22-04-2016 YPTB_RS14260 eac5bc96c2d4f2997a6e5ccd095d02cd 268 PANTHER PTHR30269 6 258 1.7E-117 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 Gene3D G3DSA:3.40.50.1980 134 298 2.1E-52 T 22-04-2016 YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PANTHER PTHR30532:SF1 17 301 5.1E-80 T 22-04-2016 YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 Gene3D G3DSA:3.40.50.1980 40 127 7.0E-32 T 22-04-2016 YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PANTHER PTHR30532 17 301 5.1E-80 T 22-04-2016 YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 SUPERFAMILY SSF53807 41 297 2.0E-54 T 22-04-2016 YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 Pfam PF01497 Periplasmic binding protein 44 278 2.9E-43 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 191 206 2.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 280 293 2.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 215 233 2.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 243 260 2.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 92 107 2.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPTB_RS04125 4d030113fab512b081bfb4dde89cbb1c 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 61 79 2.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPTB_RS19320 090875b31b9f68ca704d3d79328ba8dc 80 PANTHER PTHR39174:SF1 1 80 9.1E-40 T 22-04-2016 YPTB_RS19320 090875b31b9f68ca704d3d79328ba8dc 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 3.2E-30 T 22-04-2016 IPR010398 Protein of unknown function DUF997 YPTB_RS19320 090875b31b9f68ca704d3d79328ba8dc 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 2.0E-39 T 22-04-2016 IPR010398 Protein of unknown function DUF997 YPTB_RS19320 090875b31b9f68ca704d3d79328ba8dc 80 PANTHER PTHR39174 1 80 9.1E-40 T 22-04-2016 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 Pfam PF02954 Bacterial regulatory protein, Fis family 290 326 2.2E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 Pfam PF00158 Sigma-54 interaction domain 9 170 4.9E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 SMART SM00382 28 171 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 PANTHER PTHR32071 1 340 2.4E-243 T 22-04-2016 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:1.10.8.60 180 250 4.5E-22 T 22-04-2016 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:1.10.10.60 281 329 7.6E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 SUPERFAMILY SSF46689 222 329 1.57E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 PANTHER PTHR32071:SF38 1 340 2.4E-243 T 22-04-2016 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:3.40.50.300 3 179 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 327 3.4E-163 T 22-04-2016 IPR014317 Transcription activator PspF YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 SUPERFAMILY SSF52540 8 245 2.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 310 330 5.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS12375 416c979727886b6d0da014313ab6a5f6 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 293 310 5.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 Pfam PF00005 ABC transporter 45 192 9.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220 6 16 1.2E-172 T 22-04-2016 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220 41 292 1.2E-172 T 22-04-2016 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 SUPERFAMILY SSF52540 43 272 4.99E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 Gene3D G3DSA:3.10.580.10 272 395 1.7E-21 T 22-04-2016 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 SMART SM00382 53 242 1.1E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 SUPERFAMILY SSF54631 276 396 6.19E-13 T 22-04-2016 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 Pfam PF00571 CBS domain 346 393 5.1E-5 T 22-04-2016 IPR000644 CBS domain YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220:SF374 6 16 1.2E-172 T 22-04-2016 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220:SF374 41 292 1.2E-172 T 22-04-2016 YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 Gene3D G3DSA:3.40.50.300 5 264 4.4E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16000 1cb645ee0a8811482ca3ade6c47ac6a5 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 1.8E-172 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 YPTB_RS16570 71eb0d5ec9d5e02c324d42c54f10a3f0 96 SUPERFAMILY SSF54523 12 92 3.69E-20 T 22-04-2016 YPTB_RS16570 71eb0d5ec9d5e02c324d42c54f10a3f0 96 PANTHER PTHR38779:SF2 1 96 2.8E-34 T 22-04-2016 YPTB_RS16570 71eb0d5ec9d5e02c324d42c54f10a3f0 96 Gene3D G3DSA:3.30.1300.30 7 91 2.3E-25 T 22-04-2016 YPTB_RS16570 71eb0d5ec9d5e02c324d42c54f10a3f0 96 PANTHER PTHR38779 1 96 2.8E-34 T 22-04-2016 YPTB_RS16570 71eb0d5ec9d5e02c324d42c54f10a3f0 96 Pfam PF02501 Type II secretion system (T2SS), protein I 14 91 1.5E-17 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 YPTB_RS10985 b9bb90722edd1ec2ad2ecfee89b2dce6 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.968 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YPTB_RS10985 b9bb90722edd1ec2ad2ecfee89b2dce6 207 SUPERFAMILY SSF89392 34 206 9.42E-56 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPTB_RS10985 b9bb90722edd1ec2ad2ecfee89b2dce6 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 1.5E-47 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YPTB_RS10985 b9bb90722edd1ec2ad2ecfee89b2dce6 207 PANTHER PTHR30634:SF11 1 207 1.1E-71 T 22-04-2016 YPTB_RS10985 b9bb90722edd1ec2ad2ecfee89b2dce6 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 8 205 4.1E-73 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YPTB_RS10985 b9bb90722edd1ec2ad2ecfee89b2dce6 207 Gene3D G3DSA:2.50.20.10 15 206 1.9E-67 T 22-04-2016 YPTB_RS10985 b9bb90722edd1ec2ad2ecfee89b2dce6 207 PANTHER PTHR30634 1 207 1.1E-71 T 22-04-2016 YPTB_RS00235 abb44f812b451a5a975d09546c83a9a5 294 PANTHER PTHR30213 1 293 4.6E-113 T 22-04-2016 YPTB_RS00235 abb44f812b451a5a975d09546c83a9a5 294 Pfam PF03631 Virulence factor BrkB 29 276 2.5E-54 T 22-04-2016 IPR017039 Virulence factor BrkB YPTB_RS00235 abb44f812b451a5a975d09546c83a9a5 294 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 4 294 23.226 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial YPTB_RS00235 abb44f812b451a5a975d09546c83a9a5 294 PIRSF PIRSF035875 2 293 1.6E-61 T 22-04-2016 IPR017039 Virulence factor BrkB YPTB_RS00235 abb44f812b451a5a975d09546c83a9a5 294 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 277 3.4E-91 T 22-04-2016 IPR017039 Virulence factor BrkB YPTB_RS00235 abb44f812b451a5a975d09546c83a9a5 294 PANTHER PTHR30213:SF0 1 293 4.6E-113 T 22-04-2016 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 Gene3D G3DSA:3.40.50.620 143 303 2.2E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964 244 318 1.2E-78 T 22-04-2016 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964 1 88 1.2E-78 T 22-04-2016 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 Gene3D G3DSA:3.40.50.620 2 142 6.8E-26 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 SUPERFAMILY SSF52402 4 152 7.87E-28 T 22-04-2016 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964:SF41 244 318 1.2E-78 T 22-04-2016 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964:SF41 1 88 1.2E-78 T 22-04-2016 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 SUPERFAMILY SSF52402 156 305 5.11E-24 T 22-04-2016 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 Pfam PF00582 Universal stress protein family 174 300 1.3E-12 T 22-04-2016 IPR006016 UspA GO:0006950 YPTB_RS12130 c0da8f83ed281e78bca5f5383e257fb3 318 Pfam PF00582 Universal stress protein family 4 146 5.0E-19 T 22-04-2016 IPR006016 UspA GO:0006950 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 237 1.9E-56 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.776 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 PANTHER PTHR32119 2 242 3.5E-131 T 22-04-2016 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 SUPERFAMILY SSF51366 14 240 6.65E-81 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 Gene3D G3DSA:3.20.20.70 14 240 8.0E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 PANTHER PTHR32119:SF2 2 242 3.5E-131 T 22-04-2016 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 6.2E-56 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS11745 543b6cd0230dec3a2d1eb0416911475b 245 SMART SM00934 16 237 1.7E-102 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 PANTHER PTHR30469:SF10 6 352 1.6E-146 T 22-04-2016 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 SUPERFAMILY SSF111369 48 206 5.89E-24 T 22-04-2016 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:2.40.50.100 151 182 6.0E-13 T 22-04-2016 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:2.40.50.100 60 90 6.0E-13 T 22-04-2016 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 354 1.3E-99 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 248 1.2E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 PANTHER PTHR30469 6 352 1.6E-146 T 22-04-2016 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 336 7.4E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS03190 eb67a79195de0f6ef92f78adce02ee60 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 7.4E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS14340 5725707d76f7f6f97619e2428e88834b 116 PANTHER PTHR37531 2 74 5.9E-32 T 22-04-2016 YPTB_RS14340 5725707d76f7f6f97619e2428e88834b 116 PANTHER PTHR37531:SF1 2 74 5.9E-32 T 22-04-2016 YPTB_RS14340 5725707d76f7f6f97619e2428e88834b 116 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 9.5E-21 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YPTB_RS14340 5725707d76f7f6f97619e2428e88834b 116 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 5.1E-19 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YPTB_RS10835 c02b11da88d8e4681ea97248300526ad 384 SUPERFAMILY SSF53448 68 288 9.68E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS10835 c02b11da88d8e4681ea97248300526ad 384 PANTHER PTHR12726 1 384 1.0E-69 T 22-04-2016 YPTB_RS10835 c02b11da88d8e4681ea97248300526ad 384 Gene3D G3DSA:3.90.550.10 113 260 1.2E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS10835 c02b11da88d8e4681ea97248300526ad 384 Pfam PF13506 Glycosyl transferase family 21 97 265 1.3E-39 T 22-04-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 SUPERFAMILY SSF46785 5 60 5.17E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 Pfam PF00455 DeoR C terminal sensor domain 92 248 1.5E-50 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.6E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.6E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 PANTHER PTHR30363:SF11 1 264 3.3E-129 T 22-04-2016 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 Gene3D G3DSA:3.40.50.1360 94 232 2.4E-9 T 22-04-2016 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 PANTHER PTHR30363 1 264 3.3E-129 T 22-04-2016 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 SUPERFAMILY SSF100950 93 249 1.99E-29 T 22-04-2016 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 SMART SM00420 6 58 1.0E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 SMART SM01134 90 250 3.0E-63 T 22-04-2016 YPTB_RS04455 9e65f01452dab99af8dbba18a00d6899 269 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.6E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423:SF540 193 230 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423:SF540 270 522 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423:SF540 6 20 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423:SF540 573 823 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SMART SM00073 840 936 7.9E-4 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Pfam PF00072 Response regulator receiver domain 670 781 7.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SUPERFAMILY SSF52172 668 786 1.57E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SUPERFAMILY SSF158472 199 248 2.09E-5 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SUPERFAMILY SSF47226 764 777 9.03E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SUPERFAMILY SSF47226 830 931 9.03E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SMART SM00387 403 519 1.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423 193 230 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423 270 522 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423 6 20 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PANTHER PTHR24423 573 823 7.6E-215 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SMART SM00388 291 356 2.3E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SMART SM00448 668 781 4.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Pfam PF00672 HAMP domain 181 247 1.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 518 1.7E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Gene3D G3DSA:1.10.287.130 283 341 4.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 4.1E-56 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SUPERFAMILY SSF47384 277 357 3.14E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 1.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 9.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 9.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 9.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 9.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SUPERFAMILY SSF55874 345 517 3.27E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SUPERFAMILY SSF52172 534 647 3.22E-5 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 SMART SM00304 199 251 5.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Gene3D G3DSA:3.30.565.10 342 518 3.1E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Pfam PF01627 Hpt domain 850 931 7.6E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Gene3D G3DSA:3.40.50.2300 657 784 5.1E-33 T 22-04-2016 YPTB_RS04175 96d412c856fb531ab15d3f356717dcbd 942 Gene3D G3DSA:1.20.120.160 842 939 4.8E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SUPERFAMILY SSF53098 329 521 2.01E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Gene3D G3DSA:1.10.150.20 715 821 2.5E-36 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Gene3D G3DSA:1.20.1060.10 546 665 5.5E-37 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SMART SM00482 689 896 1.9E-115 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Gene3D G3DSA:3.30.70.370 822 932 3.2E-67 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Gene3D G3DSA:3.30.70.370 666 714 3.2E-67 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Pfam PF01612 3'-5' exonuclease 333 520 5.6E-44 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SUPERFAMILY SSF56672 525 932 4.11E-157 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SMART SM00279 173 208 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SUPERFAMILY SSF47807 171 291 1.26E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Pfam PF00476 DNA polymerase family A 555 929 8.4E-156 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Gene3D G3DSA:1.10.150.20 187 253 1.2E-25 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SMART SM00475 7 268 5.1E-140 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 3.1E-287 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 6.5E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Gene3D G3DSA:3.30.420.10 331 545 1.1E-87 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PANTHER PTHR10133:SF27 1 288 0.0 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PANTHER PTHR10133:SF27 319 931 0.0 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SUPERFAMILY SSF88723 7 170 2.45E-57 T 22-04-2016 IPR029060 PIN domain-like YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.5E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 SMART SM00474 333 520 8.8E-48 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PANTHER PTHR10133 1 288 0.0 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 PANTHER PTHR10133 319 931 0.0 T 22-04-2016 YPTB_RS00185 e28464faf932e6326018cf97921f197f 932 Gene3D G3DSA:3.40.50.1010 8 186 1.9E-73 T 22-04-2016 IPR029060 PIN domain-like YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 SUPERFAMILY SSF81336 98 268 9.55E-49 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 Gene3D G3DSA:1.20.120.220 99 274 7.8E-58 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 269 1.6E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 Pfam PF00119 ATP synthase A chain 50 268 3.8E-55 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410 141 274 5.5E-115 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410 1 125 5.5E-115 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 274 15.972 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410:SF7 141 274 5.5E-115 T 22-04-2016 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410:SF7 1 125 5.5E-115 T 22-04-2016 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 1.8E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 1.8E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS21440 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 1.8E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPTB_RS08630 3f617d81be7dae78f05f0da685bd4579 463 PANTHER PTHR11785 17 463 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS08630 3f617d81be7dae78f05f0da685bd4579 463 PANTHER PTHR11785:SF350 17 463 0.0 T 22-04-2016 YPTB_RS08630 3f617d81be7dae78f05f0da685bd4579 463 PIRSF PIRSF006060 6 457 3.2E-70 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS08630 3f617d81be7dae78f05f0da685bd4579 463 Pfam PF13520 Amino acid permease 53 417 9.8E-32 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 PANTHER PTHR30231 1 254 2.4E-179 T 22-04-2016 YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 2.1E-94 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 Gene3D G3DSA:3.30.420.10 3 185 2.5E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 SMART SM00479 7 184 7.4E-52 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 SUPERFAMILY SSF53098 3 185 1.34E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 PANTHER PTHR30231:SF0 1 254 2.4E-179 T 22-04-2016 YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 Pfam PF00929 Exonuclease 9 175 2.6E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS16030 1047eaca77205968cffd1900de9452a5 254 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 2.0E-89 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS12860 e2afff79b72f8a2c9235b929d37cc9ff 430 Pfam PF01547 Bacterial extracellular solute-binding protein 47 333 7.2E-25 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPTB_RS12860 e2afff79b72f8a2c9235b929d37cc9ff 430 Gene3D G3DSA:3.40.190.10 157 346 1.2E-20 T 22-04-2016 YPTB_RS12860 e2afff79b72f8a2c9235b929d37cc9ff 430 Gene3D G3DSA:3.40.190.10 39 156 3.9E-16 T 22-04-2016 YPTB_RS12860 e2afff79b72f8a2c9235b929d37cc9ff 430 PANTHER PTHR30061 1 430 2.7E-88 T 22-04-2016 YPTB_RS12860 e2afff79b72f8a2c9235b929d37cc9ff 430 SUPERFAMILY SSF53850 26 427 9.32E-64 T 22-04-2016 YPTB_RS12860 e2afff79b72f8a2c9235b929d37cc9ff 430 PANTHER PTHR30061:SF1 1 430 2.7E-88 T 22-04-2016 YPTB_RS21065 67f342c3158728750fcc77d9b40179ce 317 SUPERFAMILY SSF51735 1 307 1.37E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS21065 67f342c3158728750fcc77d9b40179ce 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 15 309 3.6E-62 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPTB_RS21065 67f342c3158728750fcc77d9b40179ce 317 PIRSF PIRSF001439 1 310 5.8E-55 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPTB_RS21065 67f342c3158728750fcc77d9b40179ce 317 Gene3D G3DSA:3.30.1780.10 1 139 3.4E-34 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal YPTB_RS21065 67f342c3158728750fcc77d9b40179ce 317 Gene3D G3DSA:3.40.50.720 140 297 3.6E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS21065 67f342c3158728750fcc77d9b40179ce 317 PANTHER PTHR13812 1 310 5.0E-78 T 22-04-2016 YPTB_RS21065 67f342c3158728750fcc77d9b40179ce 317 PANTHER PTHR13812:SF19 1 310 5.0E-78 T 22-04-2016 YPTB_RS20885 6b9499b8f56e514540b8cf2e67c3603d 284 Pfam PF13708 Domain of unknown function (DUF4942) 84 271 5.7E-60 T 22-04-2016 IPR031339 Domain of unknown function DUF4942 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.002 T 22-04-2016 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.5E-9 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 SUPERFAMILY SSF57840 8 41 7.59E-14 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 PANTHER PTHR18804 1 47 4.1E-23 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 Pfam PF00444 Ribosomal protein L36 1 41 2.6E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05425 0ae7c15400a099c15f6340fee359fa55 47 PANTHER PTHR18804:SF11 1 47 4.1E-23 T 22-04-2016 YPTB_RS04920 d8435b5d272d43ee75044fbc9608f3f8 257 Pfam PF13230 Glutamine amidotransferases class-II 1 253 1.2E-113 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 YPTB_RS04920 d8435b5d272d43ee75044fbc9608f3f8 257 SUPERFAMILY SSF56235 2 252 3.75E-51 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS04920 d8435b5d272d43ee75044fbc9608f3f8 257 PANTHER PTHR11907 1 257 3.0E-133 T 22-04-2016 YPTB_RS04920 d8435b5d272d43ee75044fbc9608f3f8 257 Gene3D G3DSA:3.60.20.10 1 248 1.3E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS04920 d8435b5d272d43ee75044fbc9608f3f8 257 PANTHER PTHR11907:SF10 1 257 3.0E-133 T 22-04-2016 YPTB_RS19955 138f8966827b522aff2eefaac3f66634 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.604 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19955 138f8966827b522aff2eefaac3f66634 179 Gene3D G3DSA:3.30.1440.10 2 179 2.2E-80 T 22-04-2016 IPR022803 Ribosomal protein L5 domain YPTB_RS19955 138f8966827b522aff2eefaac3f66634 179 PANTHER PTHR11994 1 178 9.3E-104 T 22-04-2016 YPTB_RS19955 138f8966827b522aff2eefaac3f66634 179 SUPERFAMILY SSF55282 4 179 7.53E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain YPTB_RS19955 138f8966827b522aff2eefaac3f66634 179 PIRSF PIRSF002161 1 179 5.1E-66 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19955 138f8966827b522aff2eefaac3f66634 179 Pfam PF00281 Ribosomal protein L5 24 80 1.3E-28 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal YPTB_RS19955 138f8966827b522aff2eefaac3f66634 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.5E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 6.3E-224 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 SUPERFAMILY SSF50129 321 372 3.72E-12 T 22-04-2016 IPR011032 GroES-like YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 PANTHER PTHR11695 18 111 5.4E-224 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 PANTHER PTHR11695 131 379 5.4E-224 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 SUPERFAMILY SSF50129 2 190 7.0E-74 T 22-04-2016 IPR011032 GroES-like YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 Gene3D G3DSA:3.40.50.720 193 312 4.5E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 SUPERFAMILY SSF51735 163 337 2.56E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 Gene3D G3DSA:3.90.180.10 3 192 3.5E-70 T 22-04-2016 IPR011032 GroES-like YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 129 4.7E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 SMART SM00829 13 370 5.0E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 Pfam PF00107 Zinc-binding dehydrogenase 200 327 4.9E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 PANTHER PTHR11695:SF560 18 111 5.4E-224 T 22-04-2016 YPTB_RS08355 fc2f023f78d8685a7af4915e97165ac0 379 PANTHER PTHR11695:SF560 131 379 5.4E-224 T 22-04-2016 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 8.8E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF47323 652 929 2.24E-79 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 3.8E-298 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:1.10.730.10 642 789 7.6E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:3.40.50.620 403 637 1.5E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:3.40.50.620 17 205 1.5E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946:SF11 282 935 0.0 T 22-04-2016 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946:SF11 6 259 0.0 T 22-04-2016 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF52374 403 647 4.06E-136 T 22-04-2016 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF52374 3 202 4.06E-136 T 22-04-2016 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 2.7E-229 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946 282 935 0.0 T 22-04-2016 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946 6 259 0.0 T 22-04-2016 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:3.90.740.10 206 389 4.4E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.9E-30 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.37 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 YPTB_RS03475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF50677 204 403 3.03E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:1.10.10.60 343 392 3.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF46689 343 392 2.8E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 Pfam PF13377 Periplasmic binding protein-like domain 113 282 1.5E-32 T 22-04-2016 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 343 385 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 373 389 5.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 358 373 5.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 Pfam PF12833 Helix-turn-helix domain 314 389 2.2E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 PANTHER PTHR30146 8 325 1.4E-186 T 22-04-2016 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF46689 289 337 2.02E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:3.40.50.2300 58 110 8.4E-4 T 22-04-2016 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 PANTHER PTHR30146:SF24 8 325 1.4E-186 T 22-04-2016 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:1.10.10.60 288 339 8.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF53822 10 304 1.69E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 SMART SM00342 306 389 6.3E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS21000 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:3.40.50.2300 111 282 3.1E-26 T 22-04-2016 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 Gene3D G3DSA:2.40.37.10 212 358 2.0E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 266 281 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 287 304 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 249 264 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 339 352 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 26 42 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 192 219 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 155 166 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 60 78 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PRINTS PR00992 Alanine racemase signature 120 132 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 4.0E-132 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.8E-71 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.3E-35 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 Gene3D G3DSA:3.20.20.10 11 211 6.6E-74 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 SUPERFAMILY SSF50621 225 358 1.15E-42 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PANTHER PTHR30511 1 359 1.7E-249 T 22-04-2016 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 SUPERFAMILY SSF51419 8 234 2.91E-71 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 SMART SM01005 233 357 2.8E-59 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 PANTHER PTHR30511:SF4 1 359 1.7E-249 T 22-04-2016 YPTB_RS02180 52bf48e54d8bcbb70cc6b5a509ae004a 359 Hamap MF_01201 Alanine racemase. 1 357 34.065 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 Gene3D G3DSA:3.40.190.10 175 271 3.4E-29 T 22-04-2016 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 Pfam PF03466 LysR substrate binding domain 89 296 1.9E-42 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 SUPERFAMILY SSF53850 90 301 1.15E-40 T 22-04-2016 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 Gene3D G3DSA:3.40.190.10 90 174 2.2E-28 T 22-04-2016 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 SUPERFAMILY SSF46785 4 84 2.26E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 Gene3D G3DSA:1.10.10.10 4 84 6.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 PANTHER PTHR30346:SF7 1 294 7.5E-104 T 22-04-2016 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 PANTHER PTHR30346 1 294 7.5E-104 T 22-04-2016 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11950 bc5fa479b4f51ee0525a74aef4e3317b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.3E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 PANTHER PTHR35037 1 1264 0.0 T 22-04-2016 YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 Gene3D G3DSA:2.160.20.20 410 942 3.3E-20 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 Gene3D G3DSA:2.40.128.130 943 1264 6.0E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 SMART SM00869 985 1249 8.8E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 SUPERFAMILY SSF103515 947 1264 2.62E-39 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 817 1264 1.8E-78 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 Pfam PF03797 Autotransporter beta-domain 984 1246 3.6E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 PANTHER PTHR35037:SF1 1 1264 0.0 T 22-04-2016 YPTB_RS02125 a9343f1703aca6f4747cb62b231cb5fd 1264 SUPERFAMILY SSF51126 408 930 1.48E-32 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS12355 3fcd548342d1531a233d572438f2628f 79 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 9 69 4.5E-34 T 22-04-2016 IPR014321 Phage shock protein, PspD YPTB_RS12355 3fcd548342d1531a233d572438f2628f 79 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 9 69 1.3E-20 T 22-04-2016 IPR014321 Phage shock protein, PspD YPTB_RS20570 982548f24b9612e4856db2dd77133b51 286 SUPERFAMILY SSF51569 3 284 1.61E-86 T 22-04-2016 YPTB_RS20570 982548f24b9612e4856db2dd77133b51 286 PIRSF PIRSF001359 1 286 2.4E-102 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS20570 982548f24b9612e4856db2dd77133b51 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS20570 982548f24b9612e4856db2dd77133b51 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 6.4E-80 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS20570 982548f24b9612e4856db2dd77133b51 286 Gene3D G3DSA:3.20.20.70 1 285 4.9E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS20570 982548f24b9612e4856db2dd77133b51 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 8 284 3.6E-91 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS20570 982548f24b9612e4856db2dd77133b51 286 PANTHER PTHR30304 1 286 8.3E-92 T 22-04-2016 YPTB_RS20605 e3fa524239ff7529ae477549ec4d3a8e 498 Pfam PF01384 Phosphate transporter family 30 487 9.4E-88 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 YPTB_RS20605 e3fa524239ff7529ae477549ec4d3a8e 498 PANTHER PTHR11101 2 498 0.0 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 YPTB_RS20605 e3fa524239ff7529ae477549ec4d3a8e 498 PANTHER PTHR11101:SF59 2 498 0.0 T 22-04-2016 YPTB_RS20585 94c95df70ff360754f356b9434e8792c 330 PANTHER PTHR32196:SF21 17 326 5.1E-114 T 22-04-2016 YPTB_RS20585 94c95df70ff360754f356b9434e8792c 330 PANTHER PTHR32196 17 326 5.1E-114 T 22-04-2016 YPTB_RS20585 94c95df70ff360754f356b9434e8792c 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 6.6E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS09485 178bc0803fe7f8aa43b27bf88c8b59e9 275 PANTHER PTHR31632 1 258 5.1E-106 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPTB_RS09485 178bc0803fe7f8aa43b27bf88c8b59e9 275 Pfam PF03239 Iron permease FTR1 family 1 252 6.0E-65 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00419 160 208 4.5E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 PANTHER PTHR24567:SF27 1 207 1.4E-156 T 22-04-2016 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:2.60.120.10 6 143 1.2E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 PANTHER PTHR24567 1 207 1.4E-156 T 22-04-2016 YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF51206 8 136 1.23E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site YPTB_RS20170 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00100 2 122 1.1E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPTB_RS13030 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 Gene3D G3DSA:3.40.80.10 2 177 1.5E-54 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS13030 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 PANTHER PTHR30417 1 254 6.1E-185 T 22-04-2016 YPTB_RS13030 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 158 3.8E-15 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS13030 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 SMART SM00644 7 158 7.0E-31 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS13030 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 SUPERFAMILY SSF47090 174 254 8.63E-22 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS13030 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 SUPERFAMILY SSF55846 9 174 6.41E-46 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS13030 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 PANTHER PTHR30417:SF5 1 254 6.1E-185 T 22-04-2016 YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 3.6E-41 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 PANTHER PTHR18968 1 545 2.6E-259 T 22-04-2016 YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 Gene3D G3DSA:3.40.50.1220 182 334 1.6E-55 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.6E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 SUPERFAMILY SSF52518 357 546 4.47E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 Gene3D G3DSA:3.40.50.970 335 537 9.1E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 SUPERFAMILY SSF52518 1 174 2.31E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.5E-213 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 Gene3D G3DSA:3.40.50.970 1 169 2.3E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 3.7E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 SUPERFAMILY SSF52467 184 342 4.48E-57 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS00830 198b212044590df148d0567c32ec92a7 548 PANTHER PTHR18968:SF116 1 545 2.6E-259 T 22-04-2016 YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.104 T 22-04-2016 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 1.1E-17 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 PANTHER PTHR30437:SF5 1 134 1.7E-71 T 22-04-2016 YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 Gene3D G3DSA:3.10.50.30 46 136 2.0E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 PANTHER PTHR30437 1 134 1.7E-71 T 22-04-2016 YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 Pfam PF14760 Rnk N-terminus 4 43 1.6E-12 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 SUPERFAMILY SSF54534 49 126 6.15E-18 T 22-04-2016 YPTB_RS19145 19e4733791a7e5190cb5047a5d1557de 136 Gene3D G3DSA:1.10.286.20 1 43 1.9E-17 T 22-04-2016 YPTB_RS08055 f44389c162cc3e13908046abf71ae7b4 138 SUPERFAMILY SSF51735 2 135 7.09E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08055 f44389c162cc3e13908046abf71ae7b4 138 Pfam PF13380 CoA binding domain 14 130 3.9E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPTB_RS08055 f44389c162cc3e13908046abf71ae7b4 138 SMART SM00881 10 104 7.1E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPTB_RS08055 f44389c162cc3e13908046abf71ae7b4 138 PANTHER PTHR33303 1 133 1.1E-57 T 22-04-2016 YPTB_RS08055 f44389c162cc3e13908046abf71ae7b4 138 Gene3D G3DSA:3.40.50.720 2 135 4.8E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 PANTHER PTHR30290:SF27 12 525 9.5E-247 T 22-04-2016 YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 427 1.3E-80 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 Gene3D G3DSA:3.40.190.10 173 287 2.1E-25 T 22-04-2016 YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 Gene3D G3DSA:3.90.76.10 54 172 6.7E-28 T 22-04-2016 YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 Gene3D G3DSA:3.10.105.10 288 467 6.7E-40 T 22-04-2016 YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 PIRSF PIRSF002741 30 517 2.3E-74 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 PANTHER PTHR30290 12 525 9.5E-247 T 22-04-2016 YPTB_RS15950 be582d77372408fc6dbaafd21de77ed1 525 SUPERFAMILY SSF53850 29 505 1.93E-96 T 22-04-2016 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 SUPERFAMILY SSF53850 53 325 1.34E-44 T 22-04-2016 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 PANTHER PTHR30024 4 345 3.3E-157 T 22-04-2016 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 Gene3D G3DSA:3.40.190.10 126 232 7.5E-21 T 22-04-2016 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 43 248 8.6E-21 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 Gene3D G3DSA:3.40.190.10 233 271 1.9E-5 T 22-04-2016 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 Gene3D G3DSA:3.40.190.10 82 120 1.9E-5 T 22-04-2016 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 44 339 3.5E-133 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 PANTHER PTHR30024:SF17 4 345 3.3E-157 T 22-04-2016 YPTB_RS20135 eeb631a508bce3ba2bf75ad52127363e 353 SMART SM00062 43 258 1.5E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS16035 7450947fe154a02532eb73441684f18f 154 PANTHER PTHR10642 1 152 1.7E-63 T 22-04-2016 YPTB_RS16035 7450947fe154a02532eb73441684f18f 154 Pfam PF00075 RNase H 3 141 2.5E-53 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 YPTB_RS16035 7450947fe154a02532eb73441684f18f 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 38.32 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 YPTB_RS16035 7450947fe154a02532eb73441684f18f 154 SUPERFAMILY SSF53098 3 143 2.02E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS16035 7450947fe154a02532eb73441684f18f 154 Gene3D G3DSA:3.30.420.10 2 148 1.4E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 432 4.2E-201 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 SUPERFAMILY SSF140490 343 433 7.72E-31 T 22-04-2016 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 SMART SM00928 345 390 2.4E-21 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 SUPERFAMILY SSF142019 23 252 6.02E-85 T 22-04-2016 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 430 5.9E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 SUPERFAMILY SSF142984 257 339 6.28E-22 T 22-04-2016 YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 233 3.7E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain YPTB_RS14015 6c05aea5f51bf6fab8e32247e57aa1c2 461 PANTHER PTHR11780 12 433 6.9E-222 T 22-04-2016 YPTB_RS06605 2034461e539cd9efc02bcda99fbad27b 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.9E-71 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 YPTB_RS06605 2034461e539cd9efc02bcda99fbad27b 159 SUPERFAMILY SSF55040 11 155 3.79E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YPTB_RS06605 2034461e539cd9efc02bcda99fbad27b 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.12 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 YPTB_RS06605 2034461e539cd9efc02bcda99fbad27b 159 PANTHER PTHR22960 1 158 1.3E-109 T 22-04-2016 YPTB_RS06605 2034461e539cd9efc02bcda99fbad27b 159 Pfam PF01967 MoaC family 15 150 1.3E-54 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YPTB_RS06605 2034461e539cd9efc02bcda99fbad27b 159 Gene3D G3DSA:3.30.70.640 3 157 1.6E-69 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 SMART SM00382 234 379 8.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 SMART SM00382 611 772 2.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 860 1.5E-12 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PANTHER PTHR11638:SF11 1 127 0.0 T 22-04-2016 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PANTHER PTHR11638:SF11 162 869 0.0 T 22-04-2016 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 SUPERFAMILY SSF52540 560 852 7.96E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 4.6E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 4.6E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 4.6E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 4.6E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Gene3D G3DSA:1.10.8.60 794 865 7.6E-11 T 22-04-2016 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Gene3D G3DSA:3.40.50.300 565 793 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 1.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Gene3D G3DSA:3.40.50.300 196 378 2.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PANTHER PTHR11638 1 127 0.0 T 22-04-2016 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 PANTHER PTHR11638 162 869 0.0 T 22-04-2016 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 SUPERFAMILY SSF81923 12 127 9.22E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 SMART SM01086 782 875 4.8E-11 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Gene3D G3DSA:1.10.1780.10 12 130 7.5E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 8.8E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 Gene3D G3DSA:1.10.8.60 381 464 2.3E-29 T 22-04-2016 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB_RS17580 6a6a41f025474e3c463cefd24b1dae46 882 SUPERFAMILY SSF52540 196 532 2.59E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 PANTHER PTHR10099 1 1296 0.0 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF55326 220 427 4.19E-64 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF82697 1 151 8.37E-53 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.40.50.880 1041 1264 2.1E-10 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF56042 822 1033 2.84E-54 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF52317 1036 1294 7.92E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 PANTHER PTHR10099:SF5 1 1296 0.0 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF109736 154 219 2.22E-21 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 5.2E-103 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF55326 618 815 3.66E-66 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.381 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.30.1330.10 210 420 2.2E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.30.1330.10 645 809 4.1E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SMART SM01211 1040 1295 1.6E-155 T 22-04-2016 YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 584 5.8E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 966 4.7E-13 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS15565 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF56042 430 614 1.09E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS14815 0d611498e260df0aa28d0b192f794722 291 PANTHER PTHR30406:SF1 1 283 1.9E-155 T 22-04-2016 YPTB_RS14815 0d611498e260df0aa28d0b192f794722 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 1.2E-113 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 YPTB_RS14815 0d611498e260df0aa28d0b192f794722 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 275 1.8E-106 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YPTB_RS14815 0d611498e260df0aa28d0b192f794722 291 PANTHER PTHR30406 1 283 1.9E-155 T 22-04-2016 YPTB_RS14815 0d611498e260df0aa28d0b192f794722 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 6.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14815 0d611498e260df0aa28d0b192f794722 291 Gene3D G3DSA:1.10.3720.10 19 275 3.7E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14815 0d611498e260df0aa28d0b192f794722 291 SUPERFAMILY SSF161098 16 268 2.09E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-50 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR01401 Mutator MutT protein signature 77 90 1.5E-10 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR01401 Mutator MutT protein signature 2 23 1.5E-10 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 Pfam PF00293 NUDIX domain 6 124 5.5E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 SUPERFAMILY SSF55811 1 126 5.69E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 Gene3D G3DSA:3.90.79.10 4 127 9.6E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 PANTHER PTHR22769 1 126 1.9E-80 T 22-04-2016 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 PANTHER PTHR22769:SF36 1 126 1.9E-80 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.6E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS03905 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.6E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS12235 0226f01764f920d2bea4a723edb56a37 318 Pfam PF04198 Putative sugar-binding domain 58 314 4.0E-69 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPTB_RS12235 0226f01764f920d2bea4a723edb56a37 318 SUPERFAMILY SSF100950 58 314 2.47E-64 T 22-04-2016 YPTB_RS12235 0226f01764f920d2bea4a723edb56a37 318 Pfam PF13384 Homeodomain-like domain 7 45 3.3E-6 T 22-04-2016 YPTB_RS12235 0226f01764f920d2bea4a723edb56a37 318 Gene3D G3DSA:3.40.50.1360 56 313 1.5E-71 T 22-04-2016 YPTB_RS12235 0226f01764f920d2bea4a723edb56a37 318 PANTHER PTHR34294 1 318 1.2E-164 T 22-04-2016 YPTB_RS12235 0226f01764f920d2bea4a723edb56a37 318 PANTHER PTHR34294:SF2 1 318 1.2E-164 T 22-04-2016 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SUPERFAMILY SSF53822 60 333 3.34E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SUPERFAMILY SSF47413 1 59 3.38E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SMART SM00354 1 71 6.2E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PANTHER PTHR30146 1 333 1.7E-278 T 22-04-2016 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.6E-33 T 22-04-2016 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:3.40.50.2300 167 330 9.2E-50 T 22-04-2016 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:3.40.50.2300 58 166 3.9E-47 T 22-04-2016 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:1.10.260.40 2 57 6.9E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16490 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PANTHER PTHR30146:SF57 1 333 1.7E-278 T 22-04-2016 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 SMART SM01217 641 710 5.9E-26 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 Gene3D G3DSA:3.20.20.300 3 359 1.8E-110 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 SUPERFAMILY SSF52279 381 607 4.84E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PANTHER PTHR30620 68 723 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PANTHER PTHR30620 4 39 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 SUPERFAMILY SSF51445 3 380 4.74E-110 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 24 342 5.4E-76 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 111 130 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 264 282 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 194 210 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 157 173 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 92 108 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 Gene3D G3DSA:3.40.50.1700 367 607 2.1E-62 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 Pfam PF14310 Fibronectin type III-like domain 641 710 3.9E-17 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PANTHER PTHR30620:SF5 68 723 0.0 T 22-04-2016 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 PANTHER PTHR30620:SF5 4 39 0.0 T 22-04-2016 YPTB_RS18610 a6a6862e5cdef96ad120de9f7e8f29e8 727 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 381 604 1.5E-42 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPTB_RS03250 b5dc96898767d79f547c633aae137f81 145 PIRSF PIRSF029225 2 131 3.3E-55 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03250 b5dc96898767d79f547c633aae137f81 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 2.0E-47 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03250 b5dc96898767d79f547c633aae137f81 145 Gene3D G3DSA:3.40.50.10220 26 136 2.2E-43 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03250 b5dc96898767d79f547c633aae137f81 145 SUPERFAMILY SSF102220 27 135 1.23E-36 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS03250 b5dc96898767d79f547c633aae137f81 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 1.6E-48 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 PIRSF PIRSF003167 1 593 5.5E-200 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 Pfam PF00672 HAMP domain 154 221 6.1E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 SMART SM00304 173 226 9.0E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 SUPERFAMILY SSF158472 173 221 4.32E-8 T 22-04-2016 YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 SMART SM00387 496 589 8.1E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 115 1.3E-6 T 22-04-2016 IPR029095 NarX-like, N-terminal YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 SUPERFAMILY SSF55874 464 585 1.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 587 7.8E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 PANTHER PTHR24421 85 585 4.2E-145 T 22-04-2016 YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 Gene3D G3DSA:3.30.565.10 463 586 8.5E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 PANTHER PTHR24421:SF12 85 585 4.2E-145 T 22-04-2016 YPTB_RS10735 ab79bac18678e0f42e657c35e5fe0124 593 Pfam PF07730 Histidine kinase 392 455 5.2E-17 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 SUPERFAMILY SSF50331 236 359 9.23E-23 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 Pfam PF08402 TOBE domain 280 351 8.8E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 PANTHER PTHR24220 5 291 7.6E-153 T 22-04-2016 YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 PANTHER PTHR24220:SF151 5 291 7.6E-153 T 22-04-2016 YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 Gene3D G3DSA:3.40.50.300 3 235 1.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 Gene3D G3DSA:2.40.50.140 282 343 9.0E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 Pfam PF00005 ABC transporter 20 161 7.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 SMART SM00382 28 210 4.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS02880 6d24638894da9bd3364abdf87dab5ca2 364 SUPERFAMILY SSF52540 4 241 6.16E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 SUPERFAMILY SSF53706 1 638 2.75E-236 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 Gene3D G3DSA:3.40.50.740 320 470 3.8E-61 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615:SF149 397 481 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615:SF149 1 182 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615:SF149 286 380 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615:SF149 573 646 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615:SF149 667 803 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615:SF149 210 247 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 22-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 SUPERFAMILY SSF50692 674 803 4.35E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 SUPERFAMILY SSF50692 617 647 4.35E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615 397 481 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615 1 182 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615 286 380 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615 573 646 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615 667 803 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 PANTHER PTHR11615 210 247 0.0 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 Pfam PF00384 Molybdopterin oxidoreductase 2 380 2.9E-25 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 1.3E-17 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 Gene3D G3DSA:2.40.40.20 606 803 1.0E-50 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 Gene3D G3DSA:3.40.228.10 152 262 5.9E-72 T 22-04-2016 YPTB_RS21205 63e9c741c0015b81d5600316cfbffc55 803 Gene3D G3DSA:3.40.228.10 1 108 5.9E-72 T 22-04-2016 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:1.10.260.40 9 58 2.3E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:3.40.50.2300 183 317 3.7E-53 T 22-04-2016 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 SMART SM00354 9 79 3.7E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 SUPERFAMILY SSF53822 68 340 9.42E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:3.40.50.2300 59 182 6.4E-45 T 22-04-2016 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 PANTHER PTHR30146 9 341 5.0E-156 T 22-04-2016 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 1.7E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 PANTHER PTHR30146:SF4 9 341 5.0E-156 T 22-04-2016 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 7.4E-42 T 22-04-2016 YPTB_RS00600 fa8bbcacffd89fa0b3f943e8d9c55428 342 SUPERFAMILY SSF47413 8 67 9.09E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 PIRSF PIRSF001500 1 379 1.2E-141 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:1.20.59.10 2 105 2.3E-40 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 SUPERFAMILY SSF48600 5 91 2.01E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 PANTHER PTHR21022:SF0 3 378 4.7E-152 T 22-04-2016 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 Pfam PF00800 Prephenate dehydratase 105 286 2.4E-61 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 Pfam PF01817 Chorismate mutase type II 10 88 7.1E-16 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:3.40.190.10 106 192 9.8E-32 T 22-04-2016 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 PANTHER PTHR21022 3 378 4.7E-152 T 22-04-2016 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 9.2E-34 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 SUPERFAMILY SSF55021 279 376 1.01E-23 T 22-04-2016 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:3.30.70.260 294 377 6.1E-27 T 22-04-2016 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 SMART SM00830 10 90 6.1E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 SUPERFAMILY SSF53850 104 290 1.63E-56 T 22-04-2016 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YPTB_RS04675 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:3.40.190.10 193 272 4.4E-28 T 22-04-2016 YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 PANTHER PTHR32305 12 26 2.5E-90 T 22-04-2016 YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 Pfam PF05593 RHS Repeat 10 46 1.7E-6 T 22-04-2016 IPR031325 RHS repeat YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 Pfam PF03527 RHS protein 236 269 1.4E-11 T 22-04-2016 IPR001826 RHS protein YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 PANTHER PTHR32305 72 338 2.5E-90 T 22-04-2016 YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 264 338 1.7E-25 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 PANTHER PTHR32305:SF6 72 338 2.5E-90 T 22-04-2016 YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 PRINTS PR00394 RHS protein signature 284 304 7.7E-16 T 22-04-2016 IPR001826 RHS protein YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 PRINTS PR00394 RHS protein signature 230 250 7.7E-16 T 22-04-2016 IPR001826 RHS protein YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 PRINTS PR00394 RHS protein signature 307 326 7.7E-16 T 22-04-2016 IPR001826 RHS protein YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 PANTHER PTHR32305:SF6 12 26 2.5E-90 T 22-04-2016 YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 31 56 3.8E-4 T 22-04-2016 IPR006530 YD repeat YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 101 137 1.1E-8 T 22-04-2016 IPR006530 YD repeat YPTB_RS17735 9cc16a089f2b62fbd35f5d8ee3afe8e0 338 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 82 110 0.0017 T 22-04-2016 IPR006530 YD repeat YPTB_RS09770 7b5e7209aa7b3fc9a67876b621812f65 340 Gene3D G3DSA:1.10.443.10 164 325 8.7E-25 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS09770 7b5e7209aa7b3fc9a67876b621812f65 340 PANTHER PTHR30349 60 325 2.8E-15 T 22-04-2016 YPTB_RS09770 7b5e7209aa7b3fc9a67876b621812f65 340 PANTHER PTHR30349:SF20 60 325 2.8E-15 T 22-04-2016 YPTB_RS09770 7b5e7209aa7b3fc9a67876b621812f65 340 Gene3D G3DSA:1.10.150.130 78 162 7.0E-12 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPTB_RS09770 7b5e7209aa7b3fc9a67876b621812f65 340 Pfam PF00589 Phage integrase family 165 325 7.9E-9 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS09770 7b5e7209aa7b3fc9a67876b621812f65 340 SUPERFAMILY SSF56349 62 325 6.36E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 SUPERFAMILY SSF54980 393 468 4.32E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.227 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 SUPERFAMILY SSF50447 262 393 9.94E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 5.7E-46 T 22-04-2016 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 Gene3D G3DSA:3.30.70.870 395 463 2.6E-13 T 22-04-2016 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PANTHER PTHR23115 1 184 8.3E-256 T 22-04-2016 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PANTHER PTHR23115 251 472 8.3E-256 T 22-04-2016 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 SUPERFAMILY SSF52540 10 277 1.86E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 5.9E-13 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.6E-46 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 0.0 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PANTHER PTHR23115:SF69 1 184 8.3E-256 T 22-04-2016 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 PANTHER PTHR23115:SF69 251 472 8.3E-256 T 22-04-2016 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 162 1.2E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 Gene3D G3DSA:2.40.30.10 293 394 7.4E-26 T 22-04-2016 YPTB_RS03260 5dd84a083c206215019f92dc7b7406cb 529 Gene3D G3DSA:3.40.50.300 11 282 2.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 PIRSF PIRSF036407 1 347 1.0E-118 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 PANTHER PTHR10256 1 347 7.6E-172 T 22-04-2016 YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 Gene3D G3DSA:3.30.1330.10 28 162 1.4E-31 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 SUPERFAMILY SSF56042 164 339 1.5E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.773 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 339 5.6E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 8.5E-137 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 SUPERFAMILY SSF55326 7 160 1.79E-40 T 22-04-2016 YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 1.7E-18 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS11440 849d44f41eca42614f73e33196b7e532 348 Gene3D G3DSA:3.90.650.10 176 344 9.0E-17 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 SUPERFAMILY SSF52540 311 501 2.33E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 SUPERFAMILY SSF52540 126 244 1.44E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 SUPERFAMILY SSF52540 4 94 1.44E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF16326 ABC transporter C-terminal domain 564 633 3.8E-20 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF00005 ABC transporter 19 185 1.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF00005 ABC transporter 336 469 3.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 PANTHER PTHR19211:SF45 1 574 6.2E-237 T 22-04-2016 YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 Gene3D G3DSA:3.40.50.300 136 282 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 Gene3D G3DSA:3.40.50.300 5 102 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 Gene3D G3DSA:3.40.50.300 322 537 1.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 SMART SM00382 28 230 8.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 SMART SM00382 344 514 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 PANTHER PTHR19211 1 574 6.2E-237 T 22-04-2016 YPTB_RS07960 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF12848 ABC transporter 224 298 1.7E-9 T 22-04-2016 IPR032781 ABC-transporter extension domain YPTB_RS02335 505dbb43c7280d0891cf0e1a7ec3b6dc 132 Pfam PF13698 Domain of unknown function (DUF4156) 41 131 2.4E-32 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 PRINTS PR01032 Gene IV protein signature 319 347 2.0E-5 T 22-04-2016 YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 PRINTS PR01032 Gene IV protein signature 372 394 2.0E-5 T 22-04-2016 YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 PRINTS PR01032 Gene IV protein signature 211 234 2.0E-5 T 22-04-2016 YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 Pfam PF00263 Bacterial type II and III secretion system protein 236 391 1.9E-37 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 PANTHER PTHR30332:SF1 119 430 7.3E-47 T 22-04-2016 YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 356 374 2.1E-6 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 185 195 2.1E-6 T 22-04-2016 IPR001775 GspD/PilQ family YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 Pfam PF13629 Pilus formation protein N terminal region 32 102 3.5E-13 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal YPTB_RS18225 b04b7d3437e900131d2c2684901fc42e 439 PANTHER PTHR30332 119 430 7.3E-47 T 22-04-2016 YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 PIRSF PIRSF006280 1 388 3.9E-200 T 22-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 152 224 1.8E-11 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 SUPERFAMILY SSF75217 235 387 7.85E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 PANTHER PTHR12029:SF57 1 386 5.8E-235 T 22-04-2016 YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 Gene3D G3DSA:3.30.1330.30 143 220 2.6E-8 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 Gene3D G3DSA:3.40.1280.10 233 386 3.8E-40 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 PANTHER PTHR12029 1 386 5.8E-235 T 22-04-2016 YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 SUPERFAMILY SSF55315 144 221 2.21E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 SMART SM00967 151 226 2.2E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPTB_RS04765 ca534bc72ddd701455c23392c442f469 390 Pfam PF00588 SpoU rRNA Methylase family 242 379 5.0E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 SUPERFAMILY SSF46785 3 109 3.01E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 PANTHER PTHR30126:SF26 1 303 6.7E-166 T 22-04-2016 YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 Gene3D G3DSA:3.40.190.10 92 177 1.4E-20 T 22-04-2016 YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 SUPERFAMILY SSF53850 90 295 3.88E-40 T 22-04-2016 YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 PANTHER PTHR30126 1 303 6.7E-166 T 22-04-2016 YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 Gene3D G3DSA:1.10.10.10 3 87 3.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 Pfam PF03466 LysR substrate binding domain 89 292 1.7E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 Gene3D G3DSA:3.40.190.10 178 260 2.5E-4 T 22-04-2016 YPTB_RS19200 090e8dfd5332b9f860f2b9ed2c2a9c2c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 248 430 4.2E-26 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 Gene3D G3DSA:3.30.420.40 244 451 3.3E-16 T 22-04-2016 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 PIRSF PIRSF000538 1 456 2.1E-46 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 2 455 6.6E-243 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 SUPERFAMILY SSF53067 243 461 5.67E-34 T 22-04-2016 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 PANTHER PTHR10196 1 474 4.8E-244 T 22-04-2016 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 SUPERFAMILY SSF53067 2 240 1.1E-51 T 22-04-2016 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 Gene3D G3DSA:3.30.420.40 2 237 7.8E-35 T 22-04-2016 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 Hamap MF_01535 Rhamnulokinase [rhaB]. 1 478 54.744 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 PANTHER PTHR10196:SF6 1 474 4.8E-244 T 22-04-2016 YPTB_RS02225 960b445f79adaadae6e37ae9fd9f8cb5 485 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 238 5.2E-36 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 Gene3D G3DSA:2.40.170.20 153 672 1.2E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 1.8E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 Pfam PF00593 TonB dependent receptor 434 669 6.4E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 SUPERFAMILY SSF56935 19 672 2.43E-94 T 22-04-2016 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 Gene3D G3DSA:2.170.130.10 22 152 2.6E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 1.2E-149 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 PANTHER PTHR32552 1 672 5.1E-294 T 22-04-2016 YPTB_RS08760 5a371f99207a159f0967ac6749e6ddf7 673 PANTHER PTHR32552:SF11 1 672 5.1E-294 T 22-04-2016 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 Gene3D G3DSA:1.10.10.10 175 229 6.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 229 7.4E-65 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 Gene3D G3DSA:1.10.10.10 93 138 4.6E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 SUPERFAMILY SSF88659 93 154 9.16E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 Pfam PF04542 Sigma-70 region 2 22 92 7.9E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 Pfam PF04545 Sigma-70, region 4 180 228 9.6E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 SUPERFAMILY SSF88946 19 91 1.7E-17 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 PANTHER PTHR30385:SF7 1 228 2.2E-50 T 22-04-2016 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 229 2.4E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 PRINTS PR00046 Major sigma-70 factor signature 216 227 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 PRINTS PR00046 Major sigma-70 factor signature 184 196 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 PRINTS PR00046 Major sigma-70 factor signature 47 60 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 PRINTS PR00046 Major sigma-70 factor signature 201 216 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 PANTHER PTHR30385 1 228 2.2E-50 T 22-04-2016 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 Pfam PF04539 Sigma-70 region 3 100 142 1.1E-7 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS17960 d426423fdd53a26cdd911b9b8bef0bf3 231 SUPERFAMILY SSF88659 158 230 1.38E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS02575 7d3845f09043e054cfdbc33442365df1 187 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 183 2.1E-76 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPTB_RS02575 7d3845f09043e054cfdbc33442365df1 187 SUPERFAMILY SSF52833 49 181 2.87E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS02575 7d3845f09043e054cfdbc33442365df1 187 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 185 2.7E-81 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPTB_RS02575 7d3845f09043e054cfdbc33442365df1 187 Gene3D G3DSA:3.40.30.10 44 181 2.0E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS08845 9d420d4f278717cbc7eda75ad35494cb 246 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 2.1E-7 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 YPTB_RS08845 9d420d4f278717cbc7eda75ad35494cb 246 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 2.1E-7 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 YPTB_RS08845 9d420d4f278717cbc7eda75ad35494cb 246 Gene3D G3DSA:3.90.470.20 130 204 1.1E-5 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS08845 9d420d4f278717cbc7eda75ad35494cb 246 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 131 201 4.0E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS08845 9d420d4f278717cbc7eda75ad35494cb 246 PANTHER PTHR38096 1 246 5.4E-82 T 22-04-2016 YPTB_RS08845 9d420d4f278717cbc7eda75ad35494cb 246 SUPERFAMILY SSF56214 130 205 3.84E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 Pfam PF00158 Sigma-54 interaction domain 141 307 1.8E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 SMART SM00448 4 115 8.5E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 Pfam PF00072 Response regulator receiver domain 6 115 6.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:3.40.50.300 139 313 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 SMART SM00382 161 312 6.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 5.9E-244 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:1.10.8.60 314 392 9.4E-24 T 22-04-2016 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.6E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 SUPERFAMILY SSF52540 140 384 1.18E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:3.40.50.2300 6 133 3.3E-38 T 22-04-2016 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 SUPERFAMILY SSF52172 6 186 2.56E-47 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 PANTHER PTHR32071:SF15 6 470 1.3E-258 T 22-04-2016 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 SUPERFAMILY SSF46689 381 470 2.01E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 PANTHER PTHR32071 6 470 1.3E-258 T 22-04-2016 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:1.10.10.60 400 470 1.6E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS00205 ee4e6e23b6c7dd1c722463e812feb201 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 PANTHER PTHR39576:SF2 1 389 4.4E-66 T 22-04-2016 YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Gene3D G3DSA:2.60.40.1080 507 595 4.2E-31 T 22-04-2016 YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Gene3D G3DSA:2.60.40.920 407 499 5.6E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Pfam PF09134 Invasin, domain 3 309 403 2.5E-17 T 22-04-2016 IPR015217 Invasin, domain 3 YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Pfam PF09134 Invasin, domain 3 408 503 1.4E-15 T 22-04-2016 IPR015217 Invasin, domain 3 YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SUPERFAMILY SSF49373 308 401 9.81E-25 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SUPERFAMILY SSF49373 407 500 8.83E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SUPERFAMILY SSF49373 213 305 6.28E-41 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Gene3D G3DSA:2.60.40.920 308 404 1.6E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Pfam PF02369 Bacterial Ig-like domain (group 1) 212 304 1.5E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SUPERFAMILY SSF49373 507 595 3.66E-31 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SUPERFAMILY SSF56436 597 695 1.69E-53 T 22-04-2016 IPR016187 C-type lectin fold YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Pfam PF07979 Intimin C-type lectin domain 596 681 1.2E-11 T 22-04-2016 IPR013117 Intimin, C-terminal YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Pfam PF11924 Invasin beta-domain of outer membrane 1 94 6.3E-32 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Gene3D G3DSA:3.10.100.10 597 694 1.1E-24 T 22-04-2016 IPR016186 C-type lectin-like YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 Gene3D G3DSA:2.60.40.920 213 305 2.0E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 PANTHER PTHR39576 1 389 4.4E-66 T 22-04-2016 YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SMART SM00634 311 397 1.2E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SMART SM00634 410 498 0.72 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS09190 8c4710d52d3b667e04322d16e3a0b291 696 SMART SM00634 213 302 9.9E-26 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 Pfam PF00005 ABC transporter 272 425 3.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 Pfam PF00005 ABC transporter 22 171 6.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 SUPERFAMILY SSF52540 271 486 1.23E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 SMART SM00382 280 485 4.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 SMART SM00382 31 218 6.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 SUPERFAMILY SSF52540 5 224 5.74E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 PANTHER PTHR24220 8 380 1.5E-201 T 22-04-2016 YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 Gene3D G3DSA:3.40.50.300 3 237 2.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 Gene3D G3DSA:3.40.50.300 271 491 2.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 PANTHER PTHR24220:SF416 8 380 1.5E-201 T 22-04-2016 YPTB_RS20590 5cd1fd16c167c2dc1615a125e33cc942 507 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 551 8.6E-175 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PANTHER PTHR11686:SF9 25 587 1.5E-206 T 22-04-2016 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 Pfam PF01019 Gamma-glutamyltranspeptidase 49 578 2.6E-182 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PANTHER PTHR11686 25 587 1.5E-206 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 SUPERFAMILY SSF56235 25 587 5.4E-185 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS05130 5459c7fb003c7de0cec9b7f106c6788c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 1.7E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 SUPERFAMILY SSF69336 1210 1464 1.83E-89 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Gene3D G3DSA:2.160.20.60 1209 1464 3.7E-97 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Gene3D G3DSA:3.60.20.10 12 432 7.8E-173 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 7.6E-158 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 SUPERFAMILY SSF56235 12 428 4.63E-150 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 SUPERFAMILY SSF51395 433 1187 1.05E-252 T 22-04-2016 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Pfam PF04898 Glutamate synthase central domain 456 736 1.6E-104 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 PANTHER PTHR11938:SF1 1 1475 0.0 T 22-04-2016 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Pfam PF01493 GXGXG motif 1235 1418 5.5E-76 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 PANTHER PTHR11938 1 1475 0.0 T 22-04-2016 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Gene3D G3DSA:3.20.20.70 436 780 4.8E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 424 3.7E-176 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain YPTB_RS18960 7d40477b6ff409f080fd3befc27beb64 1485 Gene3D G3DSA:3.20.20.70 810 1197 2.7E-166 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 SUPERFAMILY SSF55804 500 638 9.81E-41 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 6.5E-182 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 637 1.9E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 Gene3D G3DSA:3.40.50.10370 378 472 5.4E-42 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 543 559 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 PANTHER PTHR30181 1 614 0.0 T 22-04-2016 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 457 6.3E-10 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 PANTHER PTHR30181:SF2 1 614 0.0 T 22-04-2016 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 Gene3D G3DSA:3.40.930.10 501 638 1.3E-43 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 SUPERFAMILY SSF52794 379 469 3.66E-23 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS21155 8a7385bfb4e103b4100594e58d6c5d0d 643 Pfam PF02378 Phosphotransferase system, EIIC 18 278 1.0E-20 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 Gene3D G3DSA:3.40.50.1360 1 136 4.7E-59 T 22-04-2016 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 PANTHER PTHR11934:SF11 1 217 2.0E-149 T 22-04-2016 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.3E-57 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 SUPERFAMILY SSF100950 1 146 2.56E-48 T 22-04-2016 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.577 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 SUPERFAMILY SSF75445 127 198 2.49E-23 T 22-04-2016 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 4.0E-69 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 Gene3D G3DSA:3.30.70.260 137 196 1.4E-27 T 22-04-2016 YPTB_RS17280 39e4491dab8dbdcaafabf48cef276706 218 PANTHER PTHR11934 1 217 2.0E-149 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 Pfam PF02446 4-alpha-glucanotransferase 151 669 1.1E-131 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438:SF5 62 566 5.3E-279 T 22-04-2016 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438:SF5 585 693 5.3E-279 T 22-04-2016 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 103 690 2.5E-243 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438 62 566 5.3E-279 T 22-04-2016 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438 585 693 5.3E-279 T 22-04-2016 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 Gene3D G3DSA:3.20.20.80 617 691 2.0E-165 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 Gene3D G3DSA:3.20.20.80 143 578 2.0E-165 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 SUPERFAMILY SSF51445 613 687 1.8E-148 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS20405 f0683d64d305c20720001984c16e6ad6 698 SUPERFAMILY SSF51445 145 575 1.8E-148 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS04800 3188c47daedcf5ad34494bf493ac6b81 128 Gene3D G3DSA:3.10.450.50 6 127 3.1E-61 T 22-04-2016 IPR032710 NTF2-like domain YPTB_RS04800 3188c47daedcf5ad34494bf493ac6b81 128 Pfam PF11533 Protein of unknown function (DUF3225) 5 127 1.4E-61 T 22-04-2016 IPR024507 Protein of unknown function DUF3225 YPTB_RS04800 3188c47daedcf5ad34494bf493ac6b81 128 SUPERFAMILY SSF54427 4 126 7.32E-40 T 22-04-2016 IPR032710 NTF2-like domain YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 72 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 Pfam PF02142 MGS-like domain 27 118 2.0E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 PIRSF PIRSF006614 8 151 1.2E-64 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 SMART SM00851 25 118 1.3E-26 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 PANTHER PTHR30492 2 154 4.5E-91 T 22-04-2016 YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 Gene3D G3DSA:3.40.50.1380 2 151 2.6E-64 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 SUPERFAMILY SSF52335 6 150 7.59E-57 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.0E-64 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPTB_RS08045 e473a9e575f6fb3d87bfb9bc6308449d 154 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 38.608 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 Gene3D G3DSA:3.30.450.20 99 194 3.0E-10 T 22-04-2016 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 Gene3D G3DSA:1.10.287.130 195 254 1.7E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 6.0E-135 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF00989 PAS fold 99 193 3.8E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 SMART SM00091 98 165 1.5E-7 T 22-04-2016 IPR000014 PAS domain YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 PANTHER PTHR24423:SF554 1 428 6.8E-198 T 22-04-2016 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 2.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 5.6E-29 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 SUPERFAMILY SSF55785 87 195 1.03E-12 T 22-04-2016 IPR000014 PAS domain YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 PANTHER PTHR24423 1 428 6.8E-198 T 22-04-2016 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 SUPERFAMILY SSF47384 190 268 4.51E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 1.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 Gene3D G3DSA:3.30.565.10 255 422 1.5E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 SMART SM00388 203 269 3.0E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 7.4E-9 T 22-04-2016 IPR000014 PAS domain YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 SUPERFAMILY SSF55874 259 423 6.02E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS05100 a9a18b6d56498b82c11dd104676a9ee7 438 SMART SM00387 313 425 1.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS19610 d71e755d21c6abff66cdec34183dbf9c 462 PANTHER PTHR37024:SF2 1 460 3.2E-304 T 22-04-2016 YPTB_RS19610 d71e755d21c6abff66cdec34183dbf9c 462 PANTHER PTHR37024 1 460 3.2E-304 T 22-04-2016 YPTB_RS19610 d71e755d21c6abff66cdec34183dbf9c 462 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 9 457 3.2E-158 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPTB_RS19610 d71e755d21c6abff66cdec34183dbf9c 462 Pfam PF06812 ImpA, N-terminal, type VI secretion system 15 112 2.4E-11 T 22-04-2016 IPR010657 ImpA, N-terminal YPTB_RS19610 d71e755d21c6abff66cdec34183dbf9c 462 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 215 454 3.3E-78 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPTB_RS06325 6e0750c5470509e9b55745bc6fc86eab 115 SUPERFAMILY SSF81343 5 114 1.24E-28 T 22-04-2016 YPTB_RS06325 6e0750c5470509e9b55745bc6fc86eab 115 PANTHER PTHR38689:SF1 2 115 3.5E-61 T 22-04-2016 YPTB_RS06325 6e0750c5470509e9b55745bc6fc86eab 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 1.6E-35 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 YPTB_RS06325 6e0750c5470509e9b55745bc6fc86eab 115 PIRSF PIRSF000169 1 115 4.4E-41 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 YPTB_RS06325 6e0750c5470509e9b55745bc6fc86eab 115 Gene3D G3DSA:1.20.1300.10 1 114 1.3E-39 T 22-04-2016 YPTB_RS06325 6e0750c5470509e9b55745bc6fc86eab 115 PANTHER PTHR38689 2 115 3.5E-61 T 22-04-2016 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 309 320 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 SUPERFAMILY SSF51621 377 673 1.28E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 122 690 3.2E-138 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PANTHER PTHR22931:SF24 189 675 0.0 T 22-04-2016 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 SUPERFAMILY SSF52009 249 367 2.35E-21 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 572 590 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Pfam PF00391 PEP-utilising enzyme, mobile domain 278 350 1.8E-13 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PANTHER PTHR22931 189 675 0.0 T 22-04-2016 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PRINTS PR00107 Phosphocarrier protein signature 14 30 7.7E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PRINTS PR00107 Phosphocarrier protein signature 41 56 7.7E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PRINTS PR00107 Phosphocarrier protein signature 56 73 7.7E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Pfam PF00381 PTS HPr component phosphorylation site 5 85 6.3E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Gene3D G3DSA:1.10.274.10 152 256 9.1E-14 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Gene3D G3DSA:3.40.930.10 701 843 3.4E-40 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Pfam PF05524 PEP-utilising enzyme, N-terminal 122 250 3.9E-12 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Gene3D G3DSA:3.30.1340.10 4 88 1.3E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 705 842 1.9E-30 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 SUPERFAMILY SSF47831 148 267 7.32E-15 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Gene3D G3DSA:3.50.30.10 257 378 3.9E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 SUPERFAMILY SSF55594 4 88 3.14E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 SUPERFAMILY SSF55804 702 841 8.11E-30 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 572 587 3.3E-21 T 22-04-2016 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 418 437 3.3E-21 T 22-04-2016 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 637 3.3E-21 T 22-04-2016 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 589 604 3.3E-21 T 22-04-2016 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Gene3D G3DSA:3.20.20.60 379 693 1.7E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS03090 367996e67d919a3c917b66b38cddc845 846 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 376 666 6.1E-101 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PANTHER PTHR26402 3 195 2.2E-94 T 22-04-2016 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Gene3D G3DSA:3.40.50.2300 2 142 7.8E-27 T 22-04-2016 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 2.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SMART SM00421 136 193 2.2E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PANTHER PTHR26402:SF500 3 195 2.2E-94 T 22-04-2016 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SMART SM00448 3 113 2.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SUPERFAMILY SSF46894 122 194 4.76E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SUPERFAMILY SSF52172 2 129 1.57E-24 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Gene3D G3DSA:1.10.10.10 143 194 2.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20800 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS14575 89ed23e8ee30f81df43871faf547687f 198 Gene3D G3DSA:1.10.3480.10 7 198 8.0E-47 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS14575 89ed23e8ee30f81df43871faf547687f 198 PANTHER PTHR34227 1 198 4.8E-133 T 22-04-2016 YPTB_RS14575 89ed23e8ee30f81df43871faf547687f 198 Pfam PF02613 Nitrate reductase delta subunit 46 154 9.6E-19 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS14575 89ed23e8ee30f81df43871faf547687f 198 PANTHER PTHR34227:SF3 1 198 4.8E-133 T 22-04-2016 YPTB_RS14575 89ed23e8ee30f81df43871faf547687f 198 PIRSF PIRSF004690 4 198 4.9E-37 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type YPTB_RS14575 89ed23e8ee30f81df43871faf547687f 198 SUPERFAMILY SSF89155 6 197 5.23E-48 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS04695 eca8bf2e7e73fceac54c04cdc5743cca 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.0E-74 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPTB_RS04695 eca8bf2e7e73fceac54c04cdc5743cca 243 PANTHER PTHR30616 1 243 3.6E-156 T 22-04-2016 YPTB_RS04695 eca8bf2e7e73fceac54c04cdc5743cca 243 PANTHER PTHR30616:SF3 1 243 3.6E-156 T 22-04-2016 YPTB_RS04695 eca8bf2e7e73fceac54c04cdc5743cca 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 1.2E-67 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPTB_RS04695 eca8bf2e7e73fceac54c04cdc5743cca 243 Gene3D G3DSA:3.60.140.10 3 242 8.2E-93 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPTB_RS04695 eca8bf2e7e73fceac54c04cdc5743cca 243 SUPERFAMILY SSF64438 3 242 6.23E-87 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 Gene3D G3DSA:3.10.129.10 5 116 2.8E-50 T 22-04-2016 IPR029069 HotDog domain YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 4.9E-102 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 Gene3D G3DSA:3.10.129.10 124 285 1.4E-59 T 22-04-2016 IPR029069 HotDog domain YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 PANTHER PTHR11066 1 286 6.8E-122 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 SUPERFAMILY SSF54637 5 114 3.84E-42 T 22-04-2016 IPR029069 HotDog domain YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 Pfam PF13622 Thioesterase-like superfamily 32 282 2.3E-59 T 22-04-2016 YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 PANTHER PTHR11066:SF34 1 286 6.8E-122 T 22-04-2016 YPTB_RS05395 8773d750fd6685c60a1824b9d1f6fdf0 286 SUPERFAMILY SSF54637 116 283 2.84E-62 T 22-04-2016 IPR029069 HotDog domain YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 Gene3D G3DSA:3.40.50.720 1 201 7.5E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 4.1E-59 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 SUPERFAMILY SSF51735 30 209 4.59E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 4.6E-135 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 SUPERFAMILY SSF48179 210 343 2.04E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 PANTHER PTHR21371 1 490 6.3E-225 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 486 39.412 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 SUPERFAMILY SSF48179 348 485 2.72E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 8.2E-26 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 1.2E-21 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS00885 4fdfa4019742c322442f061acef11d27 492 Gene3D G3DSA:1.10.1040.10 362 482 9.5E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 889 17.604 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:2.40.30.10 793 890 3.9E-40 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 PANTHER PTHR23115:SF184 367 719 3.2E-213 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 PANTHER PTHR23115:SF184 743 891 3.2E-213 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 94 3.4E-16 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF52156 669 798 1.09E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:3.30.56.50 2 50 1.3E-23 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 550 9.9E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF00009 Elongation factor Tu GTP binding domain 395 552 2.7E-35 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:3.40.50.10050 691 770 3.1E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF03144 Elongation factor Tu domain 2 812 879 8.9E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF11987 Translation-initiation factor 2 676 781 2.0E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF46955 3 50 4.94E-13 T 22-04-2016 IPR009061 Putative DNA-binding domain YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:2.40.30.10 565 655 4.2E-21 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:3.40.50.300 390 551 4.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 2.4E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF50447 565 646 4.91E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 PANTHER PTHR23115 367 719 3.2E-213 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 PANTHER PTHR23115 743 891 3.2E-213 T 22-04-2016 YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF50447 792 889 5.89E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF52540 390 559 5.26E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02750 34b2e5fea219fac73e35ef9a926b122e 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 891 4.1E-291 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YPTB_RS05535 5db9aeafd0a98622d09e126f1ab076cf 427 Gene3D G3DSA:3.50.50.60 14 106 3.3E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS05535 5db9aeafd0a98622d09e126f1ab076cf 427 Gene3D G3DSA:3.50.50.60 197 295 3.3E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS05535 5db9aeafd0a98622d09e126f1ab076cf 427 PANTHER PTHR10742 14 411 2.0E-26 T 22-04-2016 YPTB_RS05535 5db9aeafd0a98622d09e126f1ab076cf 427 SUPERFAMILY SSF51905 13 294 5.5E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS05535 5db9aeafd0a98622d09e126f1ab076cf 427 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 79 1.0E-7 T 22-04-2016 YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 Gene3D G3DSA:2.40.128.130 820 1121 3.7E-68 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 PANTHER PTHR35037:SF1 40 1121 1.3E-98 T 22-04-2016 YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 SUPERFAMILY SSF51126 409 817 4.08E-24 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 PANTHER PTHR35037 40 1121 1.3E-98 T 22-04-2016 YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 Pfam PF03212 Pertactin 711 811 2.9E-13 T 22-04-2016 IPR004899 Pertactin, central region YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 SMART SM00869 860 1110 1.0E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 Pfam PF03797 Autotransporter beta-domain 861 1099 2.4E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 58 323 0.001 T 22-04-2016 YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 727 1121 7.2E-90 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 Gene3D G3DSA:2.160.20.20 549 810 7.3E-32 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS15415 4de2f02ca7fd57c5ae32391c32f9ea3f 1121 SUPERFAMILY SSF103515 831 1121 2.88E-46 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 SUPERFAMILY SSF51126 56 445 1.1E-21 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 327 759 3.8E-97 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 Pfam PF03797 Autotransporter beta-domain 495 742 6.8E-49 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 SUPERFAMILY SSF103515 463 759 7.19E-51 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 Pfam PF03212 Pertactin 311 424 3.2E-21 T 22-04-2016 IPR004899 Pertactin, central region YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 Gene3D G3DSA:2.40.128.130 452 759 3.1E-79 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 PRINTS PR01484 Pertactin virulence factor family signature 714 739 1.8E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 PRINTS PR01484 Pertactin virulence factor family signature 627 644 1.8E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 PRINTS PR01484 Pertactin virulence factor family signature 646 669 1.8E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 PRINTS PR01484 Pertactin virulence factor family signature 675 696 1.8E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 PRINTS PR01484 Pertactin virulence factor family signature 535 559 1.8E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 PRINTS PR01484 Pertactin virulence factor family signature 739 759 1.8E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 PANTHER PTHR35037 1 759 1.4E-152 T 22-04-2016 YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 Gene3D G3DSA:2.160.20.20 202 451 2.0E-48 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 Gene3D G3DSA:2.160.20.20 49 169 2.0E-48 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS14885 8372bdc4b8039265581c2c9d82a9f0ab 759 SMART SM00869 494 748 8.9E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 Gene3D G3DSA:3.90.1150.10 301 418 4.4E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 PIRSF PIRSF005572 30 422 2.9E-50 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 PANTHER PTHR11601:SF17 16 420 9.4E-170 T 22-04-2016 YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 16 419 2.6E-161 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 Pfam PF00266 Aminotransferase class-V 33 411 1.7E-136 T 22-04-2016 IPR000192 Aminotransferase class V domain YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 PANTHER PTHR11601 16 420 9.4E-170 T 22-04-2016 YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 Gene3D G3DSA:3.40.640.10 44 300 2.2E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS03155 ff46607efdc28e3d211151a77ed45a34 422 SUPERFAMILY SSF53383 12 421 2.56E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS05390 721450434ff7aef5295af1cb2d819e11 429 SUPERFAMILY SSF111352 28 408 1.27E-127 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YPTB_RS05390 721450434ff7aef5295af1cb2d819e11 429 TIGRFAM TIGR00836 amt: ammonium transporter 32 427 1.4E-136 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YPTB_RS05390 721450434ff7aef5295af1cb2d819e11 429 PANTHER PTHR11730 25 429 7.3E-192 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YPTB_RS05390 721450434ff7aef5295af1cb2d819e11 429 Pfam PF00909 Ammonium Transporter Family 34 427 3.6E-126 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YPTB_RS05390 721450434ff7aef5295af1cb2d819e11 429 Gene3D G3DSA:1.10.3430.10 27 408 5.2E-139 T 22-04-2016 IPR029020 Ammonium/urea transporter YPTB_RS05390 721450434ff7aef5295af1cb2d819e11 429 PANTHER PTHR11730:SF17 25 429 7.3E-192 T 22-04-2016 YPTB_RS05390 721450434ff7aef5295af1cb2d819e11 429 ProSitePatterns PS01219 Ammonium transporters signature. 183 208 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 YPTB_RS18165 0fa06c2e48c767efcc5871e70eca1b78 367 Gene3D G3DSA:2.60.40.1090 221 366 1.5E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS18165 0fa06c2e48c767efcc5871e70eca1b78 367 SUPERFAMILY SSF49401 222 366 1.89E-19 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS18165 0fa06c2e48c767efcc5871e70eca1b78 367 PANTHER PTHR33420 54 367 1.9E-179 T 22-04-2016 YPTB_RS18165 0fa06c2e48c767efcc5871e70eca1b78 367 Pfam PF00419 Fimbrial protein 219 366 2.3E-12 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS18165 0fa06c2e48c767efcc5871e70eca1b78 367 PANTHER PTHR33420:SF3 54 367 1.9E-179 T 22-04-2016 YPTB_RS12990 890205414096796ceee24929adbd78c4 129 SMART SM01022 14 127 4.8E-37 T 22-04-2016 IPR007374 ASCH domain YPTB_RS12990 890205414096796ceee24929adbd78c4 129 PANTHER PTHR39203 1 129 7.4E-50 T 22-04-2016 YPTB_RS12990 890205414096796ceee24929adbd78c4 129 Pfam PF04266 ASCH domain 23 126 1.2E-21 T 22-04-2016 IPR007374 ASCH domain YPTB_RS12990 890205414096796ceee24929adbd78c4 129 Gene3D G3DSA:3.10.400.10 2 128 6.1E-47 T 22-04-2016 YPTB_RS12990 890205414096796ceee24929adbd78c4 129 SUPERFAMILY SSF88697 3 127 4.72E-43 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS12990 890205414096796ceee24929adbd78c4 129 PIRSF PIRSF021320 1 129 2.6E-40 T 22-04-2016 IPR009326 Protein of unknown function DUF984 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 Gene3D G3DSA:3.30.70.1450 322 393 4.0E-22 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 Gene3D G3DSA:3.30.70.1450 232 310 7.9E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 SUPERFAMILY SSF116726 232 289 9.94E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 PANTHER PTHR10283 448 610 5.3E-258 T 22-04-2016 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 Pfam PF03600 Citrate transporter 430 608 2.8E-19 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 Pfam PF03600 Citrate transporter 16 196 1.2E-35 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 SUPERFAMILY SSF116726 320 392 8.11E-18 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 PANTHER PTHR10283 274 353 5.3E-258 T 22-04-2016 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 PANTHER PTHR10283 2 225 5.3E-258 T 22-04-2016 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 PANTHER PTHR10283:SF12 274 353 5.3E-258 T 22-04-2016 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 PANTHER PTHR10283:SF12 2 225 5.3E-258 T 22-04-2016 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 PANTHER PTHR10283:SF12 448 610 5.3E-258 T 22-04-2016 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 Pfam PF02080 TrkA-C domain 231 297 1.6E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS14065 083ce57bd3b0465d395575bb79f4f405 610 Pfam PF02080 TrkA-C domain 326 392 2.3E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 Pfam PF08245 Mur ligase middle domain 54 196 6.7E-9 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 430 1.5E-103 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 Gene3D G3DSA:3.40.1190.10 11 299 2.3E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 SUPERFAMILY SSF53623 13 296 3.48E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 357 1.4E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 PANTHER PTHR11136 8 433 1.2E-141 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 PANTHER PTHR11136:SF0 8 433 1.2E-141 T 22-04-2016 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 Gene3D G3DSA:3.90.190.20 300 432 7.9E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 SUPERFAMILY SSF53244 298 431 2.14E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS14180 dcdc4e4099485f0de9937e593971f4b8 434 PIRSF PIRSF001563 5 434 2.9E-110 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YPTB_RS00335 698270ae59188f8d755aff7ecd13ae45 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.332 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00335 698270ae59188f8d755aff7ecd13ae45 78 PANTHER PTHR13528 1 74 4.8E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 YPTB_RS00335 698270ae59188f8d755aff7ecd13ae45 78 SUPERFAMILY SSF143800 1 77 2.94E-30 T 22-04-2016 YPTB_RS00335 698270ae59188f8d755aff7ecd13ae45 78 Pfam PF00830 Ribosomal L28 family 3 62 5.5E-26 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 YPTB_RS00335 698270ae59188f8d755aff7ecd13ae45 78 Gene3D G3DSA:2.30.170.40 2 77 6.0E-36 T 22-04-2016 YPTB_RS00335 698270ae59188f8d755aff7ecd13ae45 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 4.1E-29 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 75 90 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 163 2.4E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 Gene3D G3DSA:3.90.1550.10 7 207 5.8E-73 T 22-04-2016 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 Hamap MF_00013 Octanoyltransferase [lipB]. 9 210 37.185 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 PIRSF PIRSF016262 5 217 2.7E-58 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 SUPERFAMILY SSF55681 6 209 5.39E-70 T 22-04-2016 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 PANTHER PTHR10993 1 224 1.4E-84 T 22-04-2016 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 79 132 5.0E-25 T 22-04-2016 YPTB_RS06020 420006f97e2834a353aeb3f14b9e77af 233 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 34 207 3.7E-73 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.658 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 22-04-2016 IPR020895 Frataxin conserved site YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 1.3E-42 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 PANTHER PTHR16821 1 106 3.3E-43 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 Gene3D G3DSA:3.30.920.10 1 105 1.0E-34 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 SUPERFAMILY SSF55387 1 105 2.96E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 SMART SM01219 1 106 4.7E-56 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPTB_RS01145 4f069fa24cf723c123fce22bf2c11b44 107 Pfam PF01491 Frataxin-like domain 1 103 1.7E-28 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPTB_RS14455 5e7031f95df956d7270ec9248d185425 400 PANTHER PTHR30451 1 399 6.4E-76 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14455 5e7031f95df956d7270ec9248d185425 400 Pfam PF00577 Outer membrane usher protein 1 305 2.5E-55 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS21130 872c579a718bab2a3d98d4b9c27a78e4 151 PANTHER PTHR23091 1 131 1.4E-46 T 22-04-2016 YPTB_RS21130 872c579a718bab2a3d98d4b9c27a78e4 151 Gene3D G3DSA:3.40.630.30 1 133 1.4E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS21130 872c579a718bab2a3d98d4b9c27a78e4 151 PANTHER PTHR23091:SF266 1 131 1.4E-46 T 22-04-2016 YPTB_RS21130 872c579a718bab2a3d98d4b9c27a78e4 151 SUPERFAMILY SSF55729 1 134 2.79E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS21130 872c579a718bab2a3d98d4b9c27a78e4 151 Pfam PF13673 Acetyltransferase (GNAT) domain 58 133 3.7E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS01930 9d80a1a3316d24033fa104f1bc5d5ffe 320 SUPERFAMILY SSF101801 241 313 2.88E-14 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS01930 9d80a1a3316d24033fa104f1bc5d5ffe 320 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 241 310 9.4E-14 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS01930 9d80a1a3316d24033fa104f1bc5d5ffe 320 Gene3D G3DSA:2.30.330.10 241 314 7.5E-16 T 22-04-2016 YPTB_RS01930 9d80a1a3316d24033fa104f1bc5d5ffe 320 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 34 310 7.4E-67 T 22-04-2016 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 YPTB_RS01930 9d80a1a3316d24033fa104f1bc5d5ffe 320 PRINTS PR00956 Flagellar motor switch protein FliN signature 241 257 4.7E-5 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS01930 9d80a1a3316d24033fa104f1bc5d5ffe 320 PRINTS PR00956 Flagellar motor switch protein FliN signature 258 274 4.7E-5 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS01930 9d80a1a3316d24033fa104f1bc5d5ffe 320 PRINTS PR00956 Flagellar motor switch protein FliN signature 287 302 4.7E-5 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS20165 3f487635ead1106145cce64aa8b7d947 135 Gene3D G3DSA:3.30.300.20 35 132 2.3E-42 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPTB_RS20165 3f487635ead1106145cce64aa8b7d947 135 Pfam PF02566 OsmC-like protein 30 127 6.5E-19 T 22-04-2016 IPR003718 OsmC/Ohr family YPTB_RS20165 3f487635ead1106145cce64aa8b7d947 135 SUPERFAMILY SSF82784 1 131 4.06E-42 T 22-04-2016 IPR003718 OsmC/Ohr family YPTB_RS20165 3f487635ead1106145cce64aa8b7d947 135 Gene3D G3DSA:2.20.25.10 1 34 1.4E-19 T 22-04-2016 YPTB_RS20165 3f487635ead1106145cce64aa8b7d947 135 PANTHER PTHR34352 1 135 4.2E-58 T 22-04-2016 YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 PANTHER PTHR34106 1 56 1.7E-136 T 22-04-2016 YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 PANTHER PTHR34106 97 349 1.7E-136 T 22-04-2016 YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 Gene3D G3DSA:2.115.10.20 104 349 1.6E-109 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 Gene3D G3DSA:2.115.10.20 2 49 1.6E-109 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 107 345 3.4E-53 T 22-04-2016 IPR007184 Mannoside phosphorylase YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 SUPERFAMILY SSF75005 2 48 9.42E-77 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 SUPERFAMILY SSF75005 103 341 9.42E-77 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 PIRSF PIRSF016202 3 351 4.5E-115 T 22-04-2016 IPR007184 Mannoside phosphorylase YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 PANTHER PTHR34106:SF2 1 56 1.7E-136 T 22-04-2016 YPTB_RS13660 8019d31bc7516a99bcf4808b16dff99c 351 PANTHER PTHR34106:SF2 97 349 1.7E-136 T 22-04-2016 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 58.372 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 SUPERFAMILY SSF56014 150 344 2.75E-58 T 22-04-2016 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 5.0E-290 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 PANTHER PTHR11493 1 560 1.1E-277 T 22-04-2016 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Gene3D G3DSA:3.30.413.10 431 558 4.2E-34 T 22-04-2016 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Gene3D G3DSA:3.30.413.10 150 339 1.6E-69 T 22-04-2016 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 558 0.0054 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 2.8E-46 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Gene3D G3DSA:3.90.480.10 74 146 2.5E-63 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Gene3D G3DSA:3.90.480.10 342 422 2.5E-63 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 SUPERFAMILY SSF56014 429 561 1.57E-34 T 22-04-2016 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 2.7E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 2.7E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 PANTHER PTHR11493:SF47 1 560 1.1E-277 T 22-04-2016 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 SUPERFAMILY SSF55124 346 422 8.83E-22 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 SUPERFAMILY SSF55124 13 142 3.27E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 2.9E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS04225 9869e07da2f75035565f67898660ece5 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 1.0E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 Pfam PF01791 DeoC/LacD family aldolase 7 212 3.9E-18 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 213 5.9E-83 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 Gene3D G3DSA:3.20.20.70 3 217 2.5E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 217 34.796 T 22-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 PANTHER PTHR10889 6 217 1.8E-112 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 SMART SM01133 4 215 4.3E-95 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 SUPERFAMILY SSF51569 3 216 3.04E-78 T 22-04-2016 YPTB_RS07485 1c82ff8bf59269a6ca4186a388551976 223 PIRSF PIRSF001357 1 222 3.5E-72 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 SUPERFAMILY SSF55620 5 219 1.85E-74 T 22-04-2016 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Gene3D G3DSA:1.10.286.10 4 84 3.1E-31 T 22-04-2016 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 9.4E-85 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.834 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Gene3D G3DSA:3.30.1130.10 90 218 4.6E-51 T 22-04-2016 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Pfam PF01227 GTP cyclohydrolase I 38 216 4.9E-63 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPTB_RS08370 70e9f5f46b991fa4175c8b0fd70bd1d9 220 PANTHER PTHR11109 1 220 1.4E-107 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPTB_RS00805 33449a0730a215eadbd6b53e45ed73aa 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 315 1.1E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS00805 33449a0730a215eadbd6b53e45ed73aa 332 PANTHER PTHR32196 1 332 9.3E-231 T 22-04-2016 YPTB_RS00805 33449a0730a215eadbd6b53e45ed73aa 332 PANTHER PTHR32196:SF19 1 332 9.3E-231 T 22-04-2016 YPTB_RS11790 cdb431561e4472e678574f410cecbad7 436 PANTHER PTHR11662:SF283 1 429 6.7E-216 T 22-04-2016 YPTB_RS11790 cdb431561e4472e678574f410cecbad7 436 SUPERFAMILY SSF103473 16 430 3.53E-89 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS11790 cdb431561e4472e678574f410cecbad7 436 Gene3D G3DSA:1.20.1250.20 22 225 5.9E-46 T 22-04-2016 YPTB_RS11790 cdb431561e4472e678574f410cecbad7 436 Pfam PF07690 Major Facilitator Superfamily 33 395 4.1E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS11790 cdb431561e4472e678574f410cecbad7 436 Gene3D G3DSA:1.20.1250.20 244 428 6.7E-22 T 22-04-2016 YPTB_RS11790 cdb431561e4472e678574f410cecbad7 436 PANTHER PTHR11662 1 429 6.7E-216 T 22-04-2016 YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 Gene3D G3DSA:3.40.50.620 1 176 7.7E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 PANTHER PTHR21299 1 283 5.8E-138 T 22-04-2016 YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 4.8E-101 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.9E-110 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 Gene3D G3DSA:3.30.1300.10 181 282 3.4E-29 T 22-04-2016 YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.773 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 SUPERFAMILY SSF52374 1 281 2.25E-105 T 22-04-2016 YPTB_RS04070 880e2ecc6263dd9834421c1512aa9da2 284 PANTHER PTHR21299:SF1 1 283 5.8E-138 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 52.892 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 Gene3D G3DSA:1.10.287.180 3 76 4.0E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 3.0E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 SUPERFAMILY SSF46557 4 79 5.36E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 1.4E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 SUPERFAMILY SSF54534 81 156 5.1E-24 T 22-04-2016 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 2.2E-71 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 PANTHER PTHR30437:SF6 1 164 1.0E-99 T 22-04-2016 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 PANTHER PTHR30437 1 164 1.0E-99 T 22-04-2016 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 Gene3D G3DSA:3.10.50.30 77 156 1.9E-31 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.74 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 PIRSF PIRSF006092 1 158 2.8E-62 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YPTB_RS20355 80b197407cc1e66acf3b9c8dc2551033 171 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 SUPERFAMILY SSF75615 114 203 3.92E-27 T 22-04-2016 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Pfam PF14824 Sirohaem biosynthesis protein central 121 145 1.1E-8 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 5.6E-20 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 SUPERFAMILY SSF51735 1 112 1.54E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.30.950.10 332 458 4.4E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 PANTHER PTHR21091 165 442 1.5E-83 T 22-04-2016 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 2.7E-91 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:1.10.8.210 149 211 8.2E-24 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 PIRSF PIRSF036426 1 465 2.3E-202 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Pfam PF13241 Putative NAD(P)-binding 6 115 7.2E-24 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.30.160.110 113 148 1.5E-19 T 22-04-2016 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 4.5E-49 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.40.50.720 1 112 5.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 PANTHER PTHR21091:SF16 165 442 1.5E-83 T 22-04-2016 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.269 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 SUPERFAMILY SSF53790 215 460 1.7E-79 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.40.1010.10 215 331 1.8E-45 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YPTB_RS20240 17ee5b65693c33a916247d83176279ab 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 8.4E-71 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS12435 1207c12479ce718b8dcb1f1bc1e3a92c 286 PANTHER PTHR10534:SF0 1 286 8.2E-147 T 22-04-2016 YPTB_RS12435 1207c12479ce718b8dcb1f1bc1e3a92c 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 2.6E-128 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12435 1207c12479ce718b8dcb1f1bc1e3a92c 286 PANTHER PTHR10534 1 286 8.2E-147 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12435 1207c12479ce718b8dcb1f1bc1e3a92c 286 SUPERFAMILY SSF53613 1 279 1.2E-76 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS12435 1207c12479ce718b8dcb1f1bc1e3a92c 286 Pfam PF08543 Phosphomethylpyrimidine kinase 90 263 1.0E-16 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 YPTB_RS12435 1207c12479ce718b8dcb1f1bc1e3a92c 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 286 53.83 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12435 1207c12479ce718b8dcb1f1bc1e3a92c 286 Gene3D G3DSA:3.40.1190.20 1 284 6.6E-90 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 160 4.3E-11 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 SUPERFAMILY SSF55874 289 455 3.93E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00388 238 300 1.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423:SF553 178 456 1.3E-269 T 22-04-2016 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423:SF553 1 134 1.3E-269 T 22-04-2016 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 Gene3D G3DSA:3.30.565.10 286 455 2.4E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 454 9.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00304 184 237 6.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 Gene3D G3DSA:1.10.287.130 228 285 6.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00387 345 455 1.6E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF00672 HAMP domain 165 233 7.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 SUPERFAMILY SSF47384 224 299 2.16E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423 178 456 1.3E-269 T 22-04-2016 YPTB_RS00445 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423 1 134 1.3E-269 T 22-04-2016 YPTB_RS01700 450c3acfdfc4cd7fe59446550c29d09e 271 PANTHER PTHR34266 1 268 4.2E-163 T 22-04-2016 YPTB_RS01700 450c3acfdfc4cd7fe59446550c29d09e 271 PANTHER PTHR34266:SF2 1 268 4.2E-163 T 22-04-2016 YPTB_RS01700 450c3acfdfc4cd7fe59446550c29d09e 271 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 236 1.2E-104 T 22-04-2016 YPTB_RS01700 450c3acfdfc4cd7fe59446550c29d09e 271 Gene3D G3DSA:3.20.20.70 1 265 1.3E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS01700 450c3acfdfc4cd7fe59446550c29d09e 271 Hamap MF_00443 Thiazole synthase [thiG]. 1 263 42.89 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 YPTB_RS01700 450c3acfdfc4cd7fe59446550c29d09e 271 SUPERFAMILY SSF110399 1 235 9.68E-84 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:3.40.50.300 454 638 9.1E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 Pfam PF00270 DEAD/DEAH box helicase 271 431 6.8E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF50249 9 176 4.97E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 19 52 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 299 603 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 655 689 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 163 187 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 205 282 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 6.7E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF52540 508 653 5.91E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF52540 292 342 5.91E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 SMART SM00490 505 589 1.5E-21 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:2.40.50.140 47 139 1.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 19 52 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 299 603 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 655 689 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 163 187 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 205 282 1.8E-124 T 22-04-2016 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 SMART SM00487 265 459 5.3E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 4.2E-244 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:3.40.50.300 254 453 7.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF52540 208 453 2.13E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 Pfam PF17191 RecG wedge domain 14 172 1.1E-22 T 22-04-2016 IPR033454 RecG, wedge domain YPTB_RS00265 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:1.10.150.20 5 37 3.5E-4 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:3.90.640.10 267 338 1.8E-7 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 SUPERFAMILY SSF53067 228 405 9.36E-51 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:3.30.30.30 116 156 4.0E-8 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PRINTS PR00301 70kDa heat shock protein signature 180 200 1.6E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PRINTS PR00301 70kDa heat shock protein signature 357 373 1.6E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PRINTS PR00301 70kDa heat shock protein signature 388 408 1.6E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.6E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PRINTS PR00301 70kDa heat shock protein signature 413 432 1.6E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PRINTS PR00301 70kDa heat shock protein signature 494 510 1.6E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PRINTS PR00301 70kDa heat shock protein signature 239 249 1.6E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 SUPERFAMILY SSF53067 77 224 4.86E-47 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 644 44.242 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PANTHER PTHR19375 19 49 0.0 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PANTHER PTHR19375 78 635 0.0 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 233 246 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 360 374 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:2.60.34.10 415 555 9.7E-54 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:3.30.420.40 20 41 2.7E-53 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:3.30.420.40 79 115 2.7E-53 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:3.30.420.40 157 228 2.7E-53 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:1.20.1270.10 556 643 1.9E-30 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 SUPERFAMILY SSF53067 20 48 4.86E-47 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Pfam PF00012 Hsp70 protein 73 628 3.1E-185 T 22-04-2016 IPR013126 Heat shock protein 70 family YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:3.30.420.40 229 266 5.6E-32 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 Gene3D G3DSA:3.30.420.40 342 384 5.6E-32 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PANTHER PTHR19375:SF176 19 49 0.0 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 PANTHER PTHR19375:SF176 78 635 0.0 T 22-04-2016 YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 SUPERFAMILY SSF100934 532 643 9.42E-37 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 SUPERFAMILY SSF100920 412 561 5.23E-51 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPTB_RS15445 d2f2d46ace377299efd9fdc73d48ae2e 644 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 70 643 5.7E-258 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YPTB_RS12155 c6dc960b8606619e2a74ada8d5abbf34 463 PANTHER PTHR11785 1 462 7.6E-233 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS12155 c6dc960b8606619e2a74ada8d5abbf34 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 4.1E-169 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 YPTB_RS12155 c6dc960b8606619e2a74ada8d5abbf34 463 PIRSF PIRSF006060 1 461 3.0E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS12155 c6dc960b8606619e2a74ada8d5abbf34 463 Pfam PF13520 Amino acid permease 5 417 3.9E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS12155 c6dc960b8606619e2a74ada8d5abbf34 463 PANTHER PTHR11785:SF77 1 462 7.6E-233 T 22-04-2016 YPTB_RS17470 fac182713896752e77c602038a14e44f 358 Pfam PF01464 Transglycosylase SLT domain 195 316 1.1E-32 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPTB_RS17470 fac182713896752e77c602038a14e44f 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPTB_RS17470 fac182713896752e77c602038a14e44f 358 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 60.613 T 22-04-2016 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 YPTB_RS17470 fac182713896752e77c602038a14e44f 358 PANTHER PTHR21666:SF224 174 357 6.7E-56 T 22-04-2016 YPTB_RS17470 fac182713896752e77c602038a14e44f 358 Gene3D G3DSA:1.10.530.10 186 357 2.2E-41 T 22-04-2016 YPTB_RS17470 fac182713896752e77c602038a14e44f 358 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 6.5E-78 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal YPTB_RS17470 fac182713896752e77c602038a14e44f 358 SUPERFAMILY SSF53955 154 356 8.73E-36 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS17470 fac182713896752e77c602038a14e44f 358 PANTHER PTHR21666 174 357 6.7E-56 T 22-04-2016 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 Gene3D G3DSA:3.40.50.1980 33 243 2.6E-79 T 22-04-2016 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PIRSF PIRSF000099 3 433 1.1E-167 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PANTHER PTHR21256 9 436 0.0 T 22-04-2016 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 PANTHER PTHR21256:SF14 9 436 0.0 T 22-04-2016 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 Pfam PF00815 Histidinol dehydrogenase 31 430 1.5E-165 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 2.9E-159 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 41.003 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPTB_RS08580 402abb6d14ee3906410df8b4fc57dae4 443 SUPERFAMILY SSF53720 10 434 2.75E-86 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 PIRSF PIRSF036684 1 758 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 SMART SM00919 163 401 3.5E-140 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 SUPERFAMILY SSF53659 430 755 4.11E-91 T 22-04-2016 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 SUPERFAMILY SSF51735 163 453 1.08E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 SMART SM01274 18 151 3.6E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 PANTHER PTHR23406 31 442 1.0E-171 T 22-04-2016 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 2.1E-99 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 Gene3D G3DSA:3.40.50.10380 10 160 2.1E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 SUPERFAMILY SSF53223 10 161 2.16E-52 T 22-04-2016 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 Gene3D G3DSA:3.40.50.10750 570 727 4.6E-53 T 22-04-2016 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 5.0E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 3.1E-17 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPTB_RS14940 a7b77130531fd282db78f0d059ed665b 759 Gene3D G3DSA:3.40.50.720 161 449 8.0E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 PANTHER PTHR35891:SF2 1 207 2.2E-102 T 22-04-2016 YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 Pfam PF01323 DSBA-like thioredoxin domain 40 194 1.9E-28 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 PANTHER PTHR35891 1 207 2.2E-102 T 22-04-2016 YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 SUPERFAMILY SSF52833 20 203 3.18E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 Gene3D G3DSA:3.40.30.10 120 204 8.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 Gene3D G3DSA:3.40.30.10 1 118 3.6E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS00180 763ac468b98a4d2f5c9db4f860b44e84 207 PIRSF PIRSF001488 1 207 1.3E-91 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPTB_RS19250 69f10834e54af12134fcea64116681bf 289 PANTHER PTHR23088:SF27 1 270 1.8E-110 T 22-04-2016 YPTB_RS19250 69f10834e54af12134fcea64116681bf 289 SUPERFAMILY SSF56317 2 267 2.49E-72 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS19250 69f10834e54af12134fcea64116681bf 289 PANTHER PTHR23088 1 270 1.8E-110 T 22-04-2016 YPTB_RS19250 69f10834e54af12134fcea64116681bf 289 Gene3D G3DSA:3.60.110.10 1 271 3.0E-77 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS19250 69f10834e54af12134fcea64116681bf 289 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site YPTB_RS19250 69f10834e54af12134fcea64116681bf 289 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 7.1E-48 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 PANTHER PTHR11649 1 464 1.4E-164 T 22-04-2016 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 6.0E-177 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 Gene3D G3DSA:3.30.300.20 389 464 2.7E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.9E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.9E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 Hamap MF_00195 GTPase Der [der]. 2 466 38.646 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 Gene3D G3DSA:3.40.50.300 2 175 2.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 Gene3D G3DSA:3.40.50.300 207 388 3.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 SUPERFAMILY SSF52540 138 166 6.51E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 SUPERFAMILY SSF52540 205 469 6.51E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 Pfam PF01926 50S ribosome-binding GTPase 210 327 5.5E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.3E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 PANTHER PTHR11649:SF5 1 464 1.4E-164 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 3.4E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 372 5.2E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 SUPERFAMILY SSF52540 4 168 6.39E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 PIRSF PIRSF006485 1 471 1.7E-177 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPTB_RS15355 202e3e8fe26a2d05e30b204ea151b2dc 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 463 2.0E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like YPTB_RS00915 5261ab3cf22970297c7ee6971dd271c7 139 PRINTS PR01300 Pyocin S killer protein signature 79 96 2.3E-29 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00915 5261ab3cf22970297c7ee6971dd271c7 139 PRINTS PR01300 Pyocin S killer protein signature 1 20 2.3E-29 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00915 5261ab3cf22970297c7ee6971dd271c7 139 PRINTS PR01300 Pyocin S killer protein signature 34 55 2.3E-29 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00915 5261ab3cf22970297c7ee6971dd271c7 139 PRINTS PR01300 Pyocin S killer protein signature 117 136 2.3E-29 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00915 5261ab3cf22970297c7ee6971dd271c7 139 PRINTS PR01300 Pyocin S killer protein signature 56 75 2.3E-29 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00915 5261ab3cf22970297c7ee6971dd271c7 139 SUPERFAMILY SSF54060 5 135 1.35E-51 T 22-04-2016 YPTB_RS00915 5261ab3cf22970297c7ee6971dd271c7 139 Gene3D G3DSA:3.90.540.10 6 137 7.5E-56 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 SUPERFAMILY SSF52540 1 347 1.49E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 PANTHER PTHR30591 1 1106 0.0 T 22-04-2016 YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:3.40.50.300 364 455 8.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:3.40.50.300 657 753 8.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 PANTHER PTHR30591:SF1 1 1106 0.0 T 22-04-2016 YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:1.10.10.160 86 184 7.2E-32 T 22-04-2016 IPR013986 DExx box DNA helicase domain YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 3.4E-301 T 22-04-2016 YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 PIRSF PIRSF000980 1 1123 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 SUPERFAMILY SSF52540 370 811 7.75E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 SUPERFAMILY SSF52980 819 1121 4.83E-98 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPTB_RS16395 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 13.591 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 SUPERFAMILY SSF54909 68 153 2.15E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 SMART SM00344 7 114 4.2E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 Gene3D G3DSA:1.10.10.10 3 54 4.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 SUPERFAMILY SSF46785 5 67 2.04E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 3.6E-14 T 22-04-2016 YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 Gene3D G3DSA:3.30.70.920 60 141 2.4E-24 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.4E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 PANTHER PTHR30154:SF2 1 153 1.1E-66 T 22-04-2016 YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.7E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.7E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.7E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS00080 ceefa720730dc24a1494ba524724983e 153 PANTHER PTHR30154 1 153 1.1E-66 T 22-04-2016 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 SUPERFAMILY SSF51569 4 425 1.26E-173 T 22-04-2016 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 9.3E-199 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 PIRSF PIRSF009264 1 429 1.4E-211 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 PANTHER PTHR32502 226 424 7.9E-192 T 22-04-2016 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 PANTHER PTHR32502 12 182 7.9E-192 T 22-04-2016 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 Gene3D G3DSA:3.20.20.70 5 293 1.6E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 PANTHER PTHR32502:SF2 226 424 7.9E-192 T 22-04-2016 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 PANTHER PTHR32502:SF2 12 182 7.9E-192 T 22-04-2016 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 Gene3D G3DSA:1.10.400.20 294 409 7.9E-53 T 22-04-2016 YPTB_RS16650 5cfb81e01094ffcd91340ef82128c6a0 432 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 6.5E-201 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 YPTB_RS02060 9f2622b870dec9254c7049fb5791784f 197 PANTHER PTHR32097 1 197 3.4E-84 T 22-04-2016 YPTB_RS02060 9f2622b870dec9254c7049fb5791784f 197 PANTHER PTHR32097:SF7 1 197 3.4E-84 T 22-04-2016 YPTB_RS02060 9f2622b870dec9254c7049fb5791784f 197 Gene3D G3DSA:2.60.60.30 19 185 1.5E-54 T 22-04-2016 YPTB_RS02060 9f2622b870dec9254c7049fb5791784f 197 Pfam PF02342 TerD domain 2 185 4.7E-47 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPTB_RS10800 d7c376aef625be28a619c948e7add961 190 Gene3D G3DSA:2.60.120.10 11 115 1.3E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS10800 d7c376aef625be28a619c948e7add961 190 SUPERFAMILY SSF51182 1 187 2.31E-54 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS10800 d7c376aef625be28a619c948e7add961 190 PANTHER PTHR37943:SF1 1 190 1.8E-76 T 22-04-2016 YPTB_RS10800 d7c376aef625be28a619c948e7add961 190 PANTHER PTHR37943 1 190 1.8E-76 T 22-04-2016 YPTB_RS10800 d7c376aef625be28a619c948e7add961 190 Pfam PF05962 HutD 14 167 9.8E-52 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 1.6E-88 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 PANTHER PTHR30081 7 317 6.9E-95 T 22-04-2016 YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 Pfam PF02355 Protein export membrane protein 117 300 1.9E-71 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 Pfam PF07549 SecD/SecF GG Motif 40 66 1.2E-10 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.361 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 Gene3D G3DSA:1.20.1640.10 137 304 1.0E-28 T 22-04-2016 YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 127 288 7.8E-56 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB_RS05170 c14ccfdadd559357e7069621b8ba1e58 322 SUPERFAMILY SSF82866 79 302 3.53E-42 T 22-04-2016 YPTB_RS00925 d537aa48367f717571024910abc4f864 142 Gene3D G3DSA:3.90.540.10 6 137 2.7E-54 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 YPTB_RS00925 d537aa48367f717571024910abc4f864 142 SUPERFAMILY SSF54060 6 135 1.06E-52 T 22-04-2016 YPTB_RS00925 d537aa48367f717571024910abc4f864 142 PRINTS PR01300 Pyocin S killer protein signature 1 20 1.9E-25 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00925 d537aa48367f717571024910abc4f864 142 PRINTS PR01300 Pyocin S killer protein signature 34 55 1.9E-25 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00925 d537aa48367f717571024910abc4f864 142 PRINTS PR01300 Pyocin S killer protein signature 117 136 1.9E-25 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS00925 d537aa48367f717571024910abc4f864 142 PRINTS PR01300 Pyocin S killer protein signature 56 75 1.9E-25 T 22-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 YPTB_RS16325 4d8e701bc7220aebb29135eae73f4cf3 126 PANTHER PTHR10584:SF191 1 62 3.8E-22 T 22-04-2016 YPTB_RS16325 4d8e701bc7220aebb29135eae73f4cf3 126 Pfam PF04241 Protein of unknown function (DUF423) 15 101 2.7E-23 T 22-04-2016 IPR006696 Protein of unknown function DUF423 YPTB_RS16325 4d8e701bc7220aebb29135eae73f4cf3 126 PANTHER PTHR10584 1 62 3.8E-22 T 22-04-2016 YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 PANTHER PTHR24220 5 320 1.3E-227 T 22-04-2016 YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 SMART SM00382 32 231 4.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 8.8E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 3.1E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 SUPERFAMILY SSF52540 32 304 4.61E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 Gene3D G3DSA:3.40.50.300 2 255 5.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 PANTHER PTHR24220:SF576 5 320 1.3E-227 T 22-04-2016 YPTB_RS20750 81f7fca0c7730009df0ef4e6c1599eb5 326 Pfam PF00005 ABC transporter 24 181 1.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS10460 2ea8dc2008e299dc39fcc33b08028a7d 358 Gene3D G3DSA:3.40.50.10140 139 231 4.1E-9 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YPTB_RS10460 2ea8dc2008e299dc39fcc33b08028a7d 358 SUPERFAMILY SSF52200 136 238 6.41E-15 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YPTB_RS10460 2ea8dc2008e299dc39fcc33b08028a7d 358 Pfam PF13676 TIR domain 139 240 2.1E-19 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YPTB_RS12215 b3c2a8a961abc48fa6c59a3bad968f1f 107 Gene3D G3DSA:1.10.260.40 33 97 4.4E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS12215 b3c2a8a961abc48fa6c59a3bad968f1f 107 SUPERFAMILY SSF47413 29 102 2.28E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS12215 b3c2a8a961abc48fa6c59a3bad968f1f 107 SMART SM00530 41 96 2.9E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS12215 b3c2a8a961abc48fa6c59a3bad968f1f 107 Pfam PF01381 Helix-turn-helix 42 93 6.0E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS21045 041fd720be96d3b4e9b5622b4a6bf99a 185 Pfam PF00419 Fimbrial protein 32 184 1.6E-14 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS21045 041fd720be96d3b4e9b5622b4a6bf99a 185 SUPERFAMILY SSF49401 32 185 2.58E-36 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS21045 041fd720be96d3b4e9b5622b4a6bf99a 185 Gene3D G3DSA:2.60.40.1090 30 185 3.8E-40 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS21045 041fd720be96d3b4e9b5622b4a6bf99a 185 PANTHER PTHR33420:SF11 5 185 3.6E-81 T 22-04-2016 YPTB_RS21045 041fd720be96d3b4e9b5622b4a6bf99a 185 PANTHER PTHR33420 5 185 3.6E-81 T 22-04-2016 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PANTHER PTHR11958:SF26 1 427 7.9E-247 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 Gene3D G3DSA:1.10.3860.10 3 416 1.3E-130 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 5.3E-118 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 SUPERFAMILY SSF118215 8 412 7.32E-124 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PANTHER PTHR11958 1 427 7.9E-247 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS01845 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 334 1.9E-92 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 Gene3D G3DSA:3.40.50.300 114 275 5.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 PANTHER PTHR32120 3 350 1.0E-170 T 22-04-2016 YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 PANTHER PTHR32120:SF2 3 350 1.0E-170 T 22-04-2016 YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 SUPERFAMILY SSF52540 113 340 5.74E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 Gene3D G3DSA:1.10.40.50 276 344 1.1E-27 T 22-04-2016 YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 Pfam PF03193 Protein of unknown function, DUF258 99 276 2.3E-54 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 YPTB_RS02395 c5f046db7128b2ea4f0c810acf33dc2b 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 39 340 37.237 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 SMART SM00938 4 105 9.7E-69 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 SUPERFAMILY SSF54913 1 112 5.4E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 Gene3D G3DSA:3.30.70.120 1 112 9.7E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 PIRSF PIRSF039144 1 112 3.7E-58 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPTB_RS15530 1e929a88e07fba04ea99e462ea391b5c 112 PANTHER PTHR30115 1 112 6.0E-68 T 22-04-2016 YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 PANTHER PTHR22888:SF13 1 269 4.6E-165 T 22-04-2016 YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 Gene3D G3DSA:2.60.40.420 125 279 4.7E-41 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 240 1.3E-113 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 Pfam PF06481 COX Aromatic Rich Motif 240 286 3.9E-20 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 SUPERFAMILY SSF49503 124 282 7.71E-53 T 22-04-2016 IPR008972 Cupredoxin YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 Gene3D G3DSA:1.10.287.90 27 113 3.8E-35 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 PIRSF PIRSF000292 1 314 4.9E-130 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 PANTHER PTHR22888 1 269 4.6E-165 T 22-04-2016 YPTB_RS05280 496887891a01b2fe4231020d6a0819af 318 SUPERFAMILY SSF81464 18 116 4.58E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 YPTB_RS05065 86d201e8eb4b19d1b44654d247835418 95 SUPERFAMILY SSF51182 1 94 1.53E-31 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS05065 86d201e8eb4b19d1b44654d247835418 95 Gene3D G3DSA:2.60.120.10 1 94 2.7E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS05065 86d201e8eb4b19d1b44654d247835418 95 PANTHER PTHR36540:SF1 1 95 7.0E-51 T 22-04-2016 YPTB_RS05065 86d201e8eb4b19d1b44654d247835418 95 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 24.979 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 YPTB_RS05065 86d201e8eb4b19d1b44654d247835418 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.5E-32 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 YPTB_RS05065 86d201e8eb4b19d1b44654d247835418 95 PANTHER PTHR36540 1 95 7.0E-51 T 22-04-2016 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 Gene3D G3DSA:3.40.50.300 28 270 5.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 Gene3D G3DSA:3.30.250.10 272 328 8.9E-28 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 SUPERFAMILY SSF54752 272 327 1.96E-20 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PANTHER PTHR22942:SF1 1 337 3.9E-205 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PANTHER PTHR22942 1 337 3.9E-205 T 22-04-2016 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 Pfam PF00154 recA bacterial DNA recombination protein 9 270 2.5E-141 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 212 240 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 167 196 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 95 124 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 129 158 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 245 274 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 299 316 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 3.2E-170 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 SMART SM00382 59 230 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 Hamap MF_00268 Protein RecA [recA]. 7 331 50.697 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 SUPERFAMILY SSF52540 6 269 5.12E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04555 ecb51b3dd857407b5eb972e9f1efad70 356 ProSitePatterns PS00321 recA signature. 215 223 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 YPTB_RS06930 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Pfam PF13489 Methyltransferase domain 58 197 3.6E-25 T 22-04-2016 YPTB_RS06930 43fe6b1ccc82963b02cfcdbdeabf8f46 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 9.0E-89 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 YPTB_RS06930 43fe6b1ccc82963b02cfcdbdeabf8f46 242 PANTHER PTHR10108:SF910 1 238 2.4E-170 T 22-04-2016 YPTB_RS06930 43fe6b1ccc82963b02cfcdbdeabf8f46 242 SUPERFAMILY SSF53335 18 235 3.34E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS06930 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Gene3D G3DSA:3.40.50.150 28 225 2.2E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS06930 43fe6b1ccc82963b02cfcdbdeabf8f46 242 PANTHER PTHR10108 1 238 2.4E-170 T 22-04-2016 YPTB_RS06930 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.542 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 YPTB_RS15130 cafcf28fa34854d7ab4b0d07c9ae6835 208 PANTHER PTHR10285 1 197 1.2E-101 T 22-04-2016 YPTB_RS15130 cafcf28fa34854d7ab4b0d07c9ae6835 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.831 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 YPTB_RS15130 cafcf28fa34854d7ab4b0d07c9ae6835 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.3E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS15130 cafcf28fa34854d7ab4b0d07c9ae6835 208 SUPERFAMILY SSF53271 4 206 7.47E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS15130 cafcf28fa34854d7ab4b0d07c9ae6835 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.0E-89 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 YPTB_RS15130 cafcf28fa34854d7ab4b0d07c9ae6835 208 Gene3D G3DSA:3.40.50.2020 2 208 6.3E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 SUPERFAMILY SSF48600 4 88 4.4E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 PANTHER PTHR21363 88 371 4.3E-83 T 22-04-2016 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 Gene3D G3DSA:1.10.3660.10 248 372 2.4E-58 T 22-04-2016 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 Pfam PF01817 Chorismate mutase type II 9 86 3.0E-20 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 SMART SM00830 9 89 1.1E-29 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 Pfam PF02153 Prephenate dehydrogenase 138 344 3.2E-31 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 5.3E-44 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 SUPERFAMILY SSF48179 241 366 8.73E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 Gene3D G3DSA:3.40.50.720 84 247 2.0E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 SUPERFAMILY SSF51735 91 238 1.3E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 PANTHER PTHR21363:SF0 88 371 4.3E-83 T 22-04-2016 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 Gene3D G3DSA:1.20.59.10 3 83 2.7E-22 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS04670 b23b755abe3e064bdacd2ef2e0ec29ac 373 PIRSF PIRSF001499 1 373 6.4E-183 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 SUPERFAMILY SSF53383 109 566 1.54E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 9.3E-22 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 Gene3D G3DSA:3.90.100.10 593 719 1.0E-36 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 Gene3D G3DSA:3.40.640.10 109 419 2.0E-115 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 22-04-2016 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 PANTHER PTHR11751:SF425 110 580 1.0E-221 T 22-04-2016 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 3.0E-48 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 SUPERFAMILY SSF55904 571 719 1.57E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 Gene3D G3DSA:3.90.1150.10 421 592 6.4E-70 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 SUPERFAMILY SSF52172 1 108 2.44E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 550 8.6E-196 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 Gene3D G3DSA:3.40.50.220 1 108 3.7E-33 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 PIRSF PIRSF009393 2 720 3.3E-292 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YPTB_RS17505 73c31c253c9dfbd1c589e543423f7bc4 720 PANTHER PTHR11751 110 580 1.0E-221 T 22-04-2016 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 268 386 1.9E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 141 183 1.9E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 6.0E-49 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 PIRSF PIRSF000429 1 387 2.8E-130 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 4 126 1.7E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 184 267 1.7E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 SUPERFAMILY SSF53901 262 386 2.98E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 1.5E-81 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.34 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 SUPERFAMILY SSF53901 1 258 1.07E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 6.8E-141 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 PANTHER PTHR18919:SF69 1 387 5.2E-204 T 22-04-2016 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 PANTHER PTHR18919 1 387 5.2E-204 T 22-04-2016 YPTB_RS01545 c0c7890d8dd735cf219f4050491bb19c 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 386 1.7E-224 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPTB_RS12715 4f1037756aaabe53b7756ba52229b6b4 335 PANTHER PTHR30472:SF29 7 335 8.6E-228 T 22-04-2016 YPTB_RS12715 4f1037756aaabe53b7756ba52229b6b4 335 Pfam PF01032 FecCD transport family 29 330 1.0E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS12715 4f1037756aaabe53b7756ba52229b6b4 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.992 T 22-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 YPTB_RS12715 4f1037756aaabe53b7756ba52229b6b4 335 SUPERFAMILY SSF81345 12 330 5.1E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS12715 4f1037756aaabe53b7756ba52229b6b4 335 PANTHER PTHR30472 7 335 8.6E-228 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS12715 4f1037756aaabe53b7756ba52229b6b4 335 Gene3D G3DSA:1.10.3470.10 11 331 1.9E-95 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 327 1.6E-125 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 PANTHER PTHR12561 1 338 7.1E-262 T 22-04-2016 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 3.3E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 Gene3D G3DSA:3.30.390.50 249 314 1.2E-13 T 22-04-2016 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 SUPERFAMILY SSF55681 4 247 6.13E-79 T 22-04-2016 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 57.438 T 22-04-2016 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 UniPathway: UPA00537|UniPathway: UPA00537 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 SUPERFAMILY SSF82649 248 336 1.05E-23 T 22-04-2016 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 Gene3D G3DSA:3.90.1550.10 1 247 2.3E-84 T 22-04-2016 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 PANTHER PTHR12561:SF5 1 338 7.1E-262 T 22-04-2016 YPTB_RS12660 0937d22d3bae9657a9bb288b4127fac4 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 5.5E-19 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 PIRSF PIRSF029827 1 90 6.0E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 PANTHER PTHR36965:SF1 2 90 2.5E-55 T 22-04-2016 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 SUPERFAMILY SSF111148 1 89 4.45E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 6.3E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.386 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 Gene3D G3DSA:1.10.3880.10 1 89 5.0E-42 T 22-04-2016 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPTB_RS17465 75c9142cdd4d6e618471779118f3b852 90 PANTHER PTHR36965 2 90 2.5E-55 T 22-04-2016 YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.1E-116 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 Gene3D G3DSA:3.40.50.150 56 283 2.0E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 PANTHER PTHR11558 7 283 5.1E-125 T 22-04-2016 YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 Pfam PF01564 Spermine/spermidine synthase 9 241 1.0E-85 T 22-04-2016 YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.406 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 SUPERFAMILY SSF53335 6 283 4.57E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS04025 db2ecdc8f70421ff1845d93a080a3b96 296 Gene3D G3DSA:2.30.140.10 1 54 5.2E-19 T 22-04-2016 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 Gene3D G3DSA:3.40.50.2300 3 137 9.2E-41 T 22-04-2016 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 Gene3D G3DSA:1.10.10.60 410 452 1.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 Gene3D G3DSA:1.10.8.60 315 390 6.3E-28 T 22-04-2016 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 SUPERFAMILY SSF52540 142 385 1.61E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 PANTHER PTHR32071 1 452 2.2E-205 T 22-04-2016 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 Pfam PF02954 Bacterial regulatory protein, Fis family 413 452 2.4E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 Gene3D G3DSA:3.40.50.300 141 313 3.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 SMART SM00382 163 306 3.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 Pfam PF00072 Response regulator receiver domain 8 115 1.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 Pfam PF00158 Sigma-54 interaction domain 143 309 7.2E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 SUPERFAMILY SSF46689 356 452 7.17E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 6.1E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 454 6.1E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 PANTHER PTHR32071:SF18 1 452 2.2E-205 T 22-04-2016 YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 SUPERFAMILY SSF52172 4 187 3.42E-50 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS06675 5297f2ccf32751810fad51f33415f998 454 SMART SM00448 6 117 1.7E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 9.3E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 9.3E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 241 2.6E-86 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 3.8E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 Gene3D G3DSA:1.10.10.10 9 82 2.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 PANTHER PTHR11751 9 78 4.5E-49 T 22-04-2016 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 PANTHER PTHR11751 125 148 4.5E-49 T 22-04-2016 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 SUPERFAMILY SSF64288 63 240 3.45E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 SMART SM00345 17 75 3.4E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 Gene3D G3DSA:3.40.1410.10 83 241 4.3E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 SMART SM00866 96 236 1.7E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 PANTHER PTHR11751:SF292 9 78 4.5E-49 T 22-04-2016 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 PANTHER PTHR11751:SF292 125 148 4.5E-49 T 22-04-2016 YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 SUPERFAMILY SSF46785 8 83 2.85E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02945 9042b7f91cb1e10573bc93c8a0a8e1f9 241 Pfam PF07702 UTRA domain 96 235 6.2E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS19945 211d9feed7e2d2f269ca9fd76d452cb0 130 SUPERFAMILY SSF56047 5 129 2.09E-46 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19945 211d9feed7e2d2f269ca9fd76d452cb0 130 PANTHER PTHR11758 1 130 7.4E-63 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19945 211d9feed7e2d2f269ca9fd76d452cb0 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.795 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19945 211d9feed7e2d2f269ca9fd76d452cb0 130 Pfam PF00410 Ribosomal protein S8 5 129 1.7E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19945 211d9feed7e2d2f269ca9fd76d452cb0 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19945 211d9feed7e2d2f269ca9fd76d452cb0 130 Gene3D G3DSA:3.30.1490.10 74 129 1.1E-28 T 22-04-2016 YPTB_RS19945 211d9feed7e2d2f269ca9fd76d452cb0 130 Gene3D G3DSA:3.30.1370.30 2 72 2.4E-27 T 22-04-2016 YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 Pfam PF00905 Penicillin binding protein transpeptidase domain 316 530 6.0E-18 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 697 781 3.4E-14 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 36 784 5.3E-297 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 Gene3D G3DSA:1.10.3810.10 63 215 2.6E-43 T 22-04-2016 YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 SUPERFAMILY SSF56601 264 648 9.05E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 Gene3D G3DSA:3.40.710.10 260 638 3.9E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 SUPERFAMILY SSF53955 42 262 7.59E-53 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 PANTHER PTHR32282:SF0 16 695 1.2E-151 T 22-04-2016 YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 Pfam PF00912 Transglycosylase 63 213 7.9E-45 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPTB_RS05890 6b6e9092b007ea7e8094a39fb1685c16 787 PANTHER PTHR32282 16 695 1.2E-151 T 22-04-2016 YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:3.40.190.10 83 189 1.0E-21 T 22-04-2016 YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 PANTHER PTHR30126:SF31 1 289 1.5E-133 T 22-04-2016 YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 Pfam PF03466 LysR substrate binding domain 85 285 8.6E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:3.40.190.10 190 256 2.6E-11 T 22-04-2016 YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:1.10.10.10 1 81 2.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 PANTHER PTHR30126 1 289 1.5E-133 T 22-04-2016 YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 SUPERFAMILY SSF46785 1 109 1.52E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS08360 57dd792e5bc8ee621ee547d9e390c05a 289 SUPERFAMILY SSF53850 85 286 4.07E-37 T 22-04-2016 YPTB_RS13630 5cfa6fe31321c4312a65a3c67a957362 1096 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1092 0.0 T 22-04-2016 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPTB_RS13630 5cfa6fe31321c4312a65a3c67a957362 1096 SUPERFAMILY SSF52540 828 872 3.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13630 5cfa6fe31321c4312a65a3c67a957362 1096 SUPERFAMILY SSF52540 529 629 3.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13630 5cfa6fe31321c4312a65a3c67a957362 1096 SUPERFAMILY SSF52540 711 797 3.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13630 5cfa6fe31321c4312a65a3c67a957362 1096 SUPERFAMILY SSF52540 431 478 3.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Gene3D G3DSA:3.30.230.70 5 225 3.8E-82 T 22-04-2016 IPR027408 PNPase/RNase PH domain YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Gene3D G3DSA:3.30.230.70 314 542 2.7E-88 T 22-04-2016 IPR027408 PNPase/RNase PH domain YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SUPERFAMILY SSF50249 620 695 1.04E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SUPERFAMILY SSF54791 554 639 1.25E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Gene3D G3DSA:1.10.10.400 226 313 1.6E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 PIRSF PIRSF005499 2 704 3.8E-300 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SUPERFAMILY SSF54211 5 144 7.59E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.4E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 8.1E-14 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 1.1E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.0E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Gene3D G3DSA:2.40.50.140 619 692 1.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SUPERFAMILY SSF46915 238 320 4.18E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 4.7E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SUPERFAMILY SSF55666 450 548 6.45E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.374 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SUPERFAMILY SSF54211 293 488 4.66E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SMART SM00316 620 690 6.6E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Pfam PF00575 S1 RNA binding domain 619 690 1.9E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SUPERFAMILY SSF55666 145 235 2.24E-30 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 SMART SM00322 552 617 3.3E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Pfam PF00013 KH domain 556 614 1.1E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 Gene3D G3DSA:3.30.1370.10 552 618 1.3E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YPTB_RS02770 c4b0e162a6f15eebfe4a4b7aa0ee8ddb 704 PANTHER PTHR11252 4 699 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPTB_RS19215 549d01a499774518d91d314f3164ea48 713 Gene3D G3DSA:1.20.1600.10 375 440 2.6E-5 T 22-04-2016 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 PANTHER PTHR10357:SF152 1 632 0.0 T 22-04-2016 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 SMART SM00642 151 560 4.1E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 SUPERFAMILY SSF51011 576 629 2.09E-5 T 22-04-2016 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 638 1.5E-269 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 660 76.063 T 22-04-2016 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 UniPathway: UPA00165 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 13 95 1.1E-17 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 Gene3D G3DSA:2.60.40.10 7 148 5.6E-51 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 SUPERFAMILY SSF81296 7 144 8.68E-42 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 Gene3D G3DSA:2.60.40.1180 576 630 1.8E-4 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 Gene3D G3DSA:3.20.20.80 149 568 7.6E-105 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 SUPERFAMILY SSF51445 131 465 4.53E-122 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 SUPERFAMILY SSF51445 494 567 4.53E-122 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 Pfam PF00128 Alpha amylase, catalytic domain 186 291 9.6E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS20475 bb2e547b4d3d69cf23254de67a9e4d4d 662 PANTHER PTHR10357 1 632 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 PANTHER PTHR30579:SF2 1 296 3.6E-160 T 22-04-2016 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.444 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 PANTHER PTHR30579 1 296 3.6E-160 T 22-04-2016 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 SUPERFAMILY SSF46785 4 110 6.16E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 Gene3D G3DSA:1.10.10.10 1 73 4.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.7E-110 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 SUPERFAMILY SSF53850 93 290 2.53E-19 T 22-04-2016 YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 Pfam PF03466 LysR substrate binding domain 93 287 2.6E-13 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS17285 92db65c5b5d3ac6c726effcea5ab76f8 302 Gene3D G3DSA:3.40.190.10 92 196 3.6E-40 T 22-04-2016 YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 Gene3D G3DSA:3.40.50.970 1 176 7.8E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 3.8E-40 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 319 1.2E-32 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 5.6E-43 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 SUPERFAMILY SSF52467 182 351 1.42E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 PANTHER PTHR18968 1 573 0.0 T 22-04-2016 YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 Gene3D G3DSA:3.40.50.970 353 552 1.2E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 PANTHER PTHR18968:SF12 1 573 0.0 T 22-04-2016 YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 SUPERFAMILY SSF52518 357 558 3.93E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 SUPERFAMILY SSF52518 2 178 1.0E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 Gene3D G3DSA:3.40.50.1220 185 341 1.2E-44 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS07650 40c3a489850c03c7d24edcbee029bc9b 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 SUPERFAMILY SSF51621 6 878 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PANTHER PTHR30523:SF3 1 878 0.0 T 22-04-2016 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.224 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PANTHER PTHR30523 1 878 0.0 T 22-04-2016 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 Gene3D G3DSA:1.20.1440.90 272 387 4.0E-34 T 22-04-2016 YPTB_RS00655 7d53a9607e20d65cd05d8d46100188af 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 878 1.8E-289 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 Gene3D G3DSA:3.50.50.60 361 464 7.2E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 Gene3D G3DSA:3.50.50.60 472 626 1.2E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 PANTHER PTHR22893 1 418 6.3E-250 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 PANTHER PTHR22893:SF25 1 418 6.3E-250 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 2.1E-89 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 3.6E-12 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.6E-12 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 3.6E-12 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 SUPERFAMILY SSF51395 3 363 1.05E-111 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 SUPERFAMILY SSF51971 334 519 4.71E-41 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 Gene3D G3DSA:3.20.20.70 4 360 8.8E-122 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 SUPERFAMILY SSF51905 461 519 7.62E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 SUPERFAMILY SSF51905 557 651 7.62E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 1.4E-5 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 1.4E-5 T 22-04-2016 YPTB_RS18780 0eab65658cf7b84cc009bc950d19f9a9 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 635 8.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS15715 4ca9726bdcf4518d64f5fae1cee2e085 245 Pfam PF03746 LamB/YcsF family 3 235 6.5E-94 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YPTB_RS15715 4ca9726bdcf4518d64f5fae1cee2e085 245 PANTHER PTHR30292:SF0 1 245 2.7E-133 T 22-04-2016 YPTB_RS15715 4ca9726bdcf4518d64f5fae1cee2e085 245 SUPERFAMILY SSF88713 2 243 2.52E-93 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS15715 4ca9726bdcf4518d64f5fae1cee2e085 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.935 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YPTB_RS15715 4ca9726bdcf4518d64f5fae1cee2e085 245 PANTHER PTHR30292 1 245 2.7E-133 T 22-04-2016 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 PANTHER PTHR30065 2 260 3.8E-103 T 22-04-2016 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 PANTHER PTHR30065:SF1 2 260 3.8E-103 T 22-04-2016 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 7.0E-74 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS09305 85846acbe2497d1bfa6615f0634ee9e9 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 1.6E-65 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS18245 15d7b812aa8ad28e02d5172a325bc220 291 Pfam PF00482 Type II secretion system (T2SS), protein F 127 247 3.2E-17 T 22-04-2016 IPR018076 Type II secretion system F domain YPTB_RS18245 15d7b812aa8ad28e02d5172a325bc220 291 PANTHER PTHR35007 21 291 1.0E-99 T 22-04-2016 YPTB_RS18245 15d7b812aa8ad28e02d5172a325bc220 291 PANTHER PTHR35007:SF1 21 291 1.0E-99 T 22-04-2016 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 4.3E-105 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 265 2.3E-117 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 PANTHER PTHR20881 1 265 1.9E-194 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 PANTHER PTHR20881:SF3 1 265 1.9E-194 T 22-04-2016 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 PIRSF PIRSF000388 1 265 1.7E-98 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 41.956 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 SUPERFAMILY SSF51621 4 264 2.92E-104 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS04075 945bd7d88f19bc087af1445881c2763a 265 Gene3D G3DSA:3.20.20.60 1 265 3.5E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS06895 249033f6ae72e31759b13ae9c0ad6e09 180 SUPERFAMILY SSF56925 38 180 2.04E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS06895 249033f6ae72e31759b13ae9c0ad6e09 180 Gene3D G3DSA:2.40.160.10 29 123 4.3E-5 T 22-04-2016 IPR023614 Porin domain YPTB_RS06895 249033f6ae72e31759b13ae9c0ad6e09 180 Pfam PF07437 YfaZ precursor 1 180 1.2E-91 T 22-04-2016 IPR009998 YfaZ YPTB_RS12965 7c5aece2d21513a60cab307091adfa81 185 PANTHER PTHR37089:SF3 1 185 1.4E-108 T 22-04-2016 YPTB_RS12965 7c5aece2d21513a60cab307091adfa81 185 PANTHER PTHR37089 1 185 1.4E-108 T 22-04-2016 YPTB_RS12965 7c5aece2d21513a60cab307091adfa81 185 Pfam PF05229 Spore Coat Protein U domain 34 182 1.1E-27 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS12965 7c5aece2d21513a60cab307091adfa81 185 SMART SM00972 122 182 6.0E-14 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PANTHER PTHR11406 1 387 2.6E-205 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.332 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PIRSF PIRSF000724 1 387 2.9E-133 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 Pfam PF00162 Phosphoglycerate kinase 6 373 1.7E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 SUPERFAMILY SSF53748 3 383 1.18E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 Gene3D G3DSA:3.40.50.1260 5 174 1.1E-65 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS17315 2ae67bd6e19726b980a4684d810e7b8b 387 Gene3D G3DSA:3.40.50.1270 175 371 4.0E-80 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:3.40.192.10 68 188 3.9E-61 T 22-04-2016 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 PANTHER PTHR11606:SF4 7 447 8.3E-246 T 22-04-2016 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:3.40.50.720 209 372 4.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 SUPERFAMILY SSF51735 202 446 5.09E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 2.9E-85 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 3.6E-51 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:1.10.285.10 373 446 8.8E-26 T 22-04-2016 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:1.10.285.10 7 67 6.7E-28 T 22-04-2016 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 SMART SM00839 204 445 6.6E-91 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 SUPERFAMILY SSF53223 6 196 5.12E-74 T 22-04-2016 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 PANTHER PTHR11606 7 447 8.3E-246 T 22-04-2016 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 PIRSF PIRSF000185 22 447 7.3E-114 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPTB_RS20620 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPTB_RS10355 b11ab5f215dc45b5d5377bc4d9485a06 114 Gene3D G3DSA:2.30.110.20 1 114 1.9E-11 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS10355 b11ab5f215dc45b5d5377bc4d9485a06 114 Pfam PF05638 Type VI secretion system effector, Hcp 6 114 2.4E-11 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS10355 b11ab5f215dc45b5d5377bc4d9485a06 114 SUPERFAMILY SSF141452 3 114 7.45E-20 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS10355 b11ab5f215dc45b5d5377bc4d9485a06 114 PANTHER PTHR34319 1 114 4.8E-53 T 22-04-2016 YPTB_RS10355 b11ab5f215dc45b5d5377bc4d9485a06 114 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 113 1.6E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 SUPERFAMILY SSF56037 346 454 5.49E-31 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 PANTHER PTHR11807:SF2 21 446 3.8E-113 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 311 23.358 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 Pfam PF01171 PP-loop family 24 202 4.5E-58 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 SUPERFAMILY SSF82829 238 321 3.92E-25 T 22-04-2016 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 Gene3D G3DSA:3.40.50.620 20 183 3.2E-11 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 Pfam PF11734 TilS substrate C-terminal domain 381 453 2.4E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 PANTHER PTHR11807 21 446 3.8E-113 T 22-04-2016 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 381 425 7.5E-13 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 Pfam PF09179 TilS substrate binding domain 252 319 2.8E-20 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 SMART SM00977 381 453 2.4E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 207 4.2E-53 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPTB_RS16165 2821657bf97e218a45c7b6e95f899543 460 SUPERFAMILY SSF52402 16 237 8.82E-61 T 22-04-2016 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 Gene3D G3DSA:3.30.1360.40 80 154 3.0E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 4.8E-21 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 PANTHER PTHR34471:SF1 2 156 2.7E-68 T 22-04-2016 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 SUPERFAMILY SSF46785 3 77 8.98E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 Gene3D G3DSA:1.10.10.10 2 77 8.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 SUPERFAMILY SSF55252 82 151 2.88E-18 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 PANTHER PTHR34471 2 156 2.7E-68 T 22-04-2016 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 1.7E-45 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.096 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-31 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YPTB_RS02635 bb5f92968a2333c97a258788359e8563 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.2E-25 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Gene3D G3DSA:3.30.950.10 331 462 1.7E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 1.4E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Pfam PF13241 Putative NAD(P)-binding 6 115 5.9E-29 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 2.7E-20 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Gene3D G3DSA:1.10.8.210 150 209 5.1E-22 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 PIRSF PIRSF036426 1 465 3.0E-204 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Gene3D G3DSA:3.30.160.110 113 148 4.3E-19 T 22-04-2016 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 SUPERFAMILY SSF53790 213 456 5.37E-80 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Gene3D G3DSA:3.40.50.720 2 112 1.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 PANTHER PTHR21091:SF16 164 428 2.7E-83 T 22-04-2016 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Gene3D G3DSA:3.40.1010.10 215 330 3.5E-47 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 1.0E-92 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 SUPERFAMILY SSF51735 2 113 9.17E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 9.3E-8 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 1.1E-78 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 PANTHER PTHR21091 164 428 2.7E-83 T 22-04-2016 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.369 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPTB_RS04250 7862f2e551fbc060b0065ecb464419a8 472 SUPERFAMILY SSF75615 114 211 1.96E-28 T 22-04-2016 YPTB_RS08325 855405632e21a278a3e2759926e0411b 222 Gene3D G3DSA:3.40.50.300 1 219 1.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08325 855405632e21a278a3e2759926e0411b 222 PANTHER PTHR24220:SF539 3 218 2.6E-144 T 22-04-2016 YPTB_RS08325 855405632e21a278a3e2759926e0411b 222 PANTHER PTHR24220 3 218 2.6E-144 T 22-04-2016 YPTB_RS08325 855405632e21a278a3e2759926e0411b 222 SMART SM00382 30 217 3.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08325 855405632e21a278a3e2759926e0411b 222 SUPERFAMILY SSF52540 1 218 7.05E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08325 855405632e21a278a3e2759926e0411b 222 Pfam PF00005 ABC transporter 21 169 1.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08325 855405632e21a278a3e2759926e0411b 222 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PANTHER PTHR30587 14 246 1.6E-122 T 22-04-2016 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 173 188 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 221 233 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 48 244 1.0E-92 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 85 104 2.8E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 243 2.8E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 65 85 2.8E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 173 193 2.8E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 194 215 2.8E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 46 65 2.8E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PANTHER PTHR30587:SF0 14 246 1.6E-122 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 144 156 1.3E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 1.3E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 44 53 1.3E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 234 244 1.3E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 104 116 1.3E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 116 130 1.3E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS09315 4e5ded793aa1cbe4955fff61c4af2e7e 246 Pfam PF00813 FliP family 49 240 3.6E-77 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 PIRSF PIRSF004692 2 328 3.1E-135 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 2.0E-122 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF01380 SIS domain 46 177 2.2E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 SMART SM00116 215 263 1.2 T 22-04-2016 IPR000644 CBS domain YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 SMART SM00116 280 327 1.9 T 22-04-2016 IPR000644 CBS domain YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 PANTHER PTHR11911:SF90 180 325 1.0E-45 T 22-04-2016 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 Gene3D G3DSA:3.10.580.10 197 325 1.9E-40 T 22-04-2016 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 Gene3D G3DSA:3.40.50.10490 17 196 1.2E-50 T 22-04-2016 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 PANTHER PTHR11911 180 325 1.0E-45 T 22-04-2016 YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF00571 CBS domain 274 325 1.6E-6 T 22-04-2016 IPR000644 CBS domain YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF00571 CBS domain 207 261 1.5E-7 T 22-04-2016 IPR000644 CBS domain YPTB_RS19060 8e4a9cf338c7131989c37b30d926828b 328 SUPERFAMILY SSF53697 14 325 1.74E-66 T 22-04-2016 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 SUPERFAMILY SSF56596 5 307 7.85E-122 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 7.3E-137 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 Gene3D G3DSA:3.50.14.10 236 281 6.3E-93 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 Gene3D G3DSA:3.50.14.10 7 173 6.3E-93 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 Gene3D G3DSA:3.30.54.10 174 235 5.1E-34 T 22-04-2016 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 Gene3D G3DSA:3.30.54.10 295 308 5.1E-34 T 22-04-2016 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 1.3E-170 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPTB_RS11940 2bc6488cc81e790b1e1c5e97598f3503 311 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 44.126 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPTB_RS05680 b5de927dbe1d49a845c10205afdb9987 809 Pfam PF02687 FtsX-like permease family 247 364 2.1E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS05680 b5de927dbe1d49a845c10205afdb9987 809 Pfam PF02687 FtsX-like permease family 689 800 4.8E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS05680 b5de927dbe1d49a845c10205afdb9987 809 PANTHER PTHR30287 1 800 3.4E-172 T 22-04-2016 YPTB_RS00100 1bd527219bce0cef78a5f30016e5715b 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.945 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup YPTB_RS00100 1bd527219bce0cef78a5f30016e5715b 622 Pfam PF02705 K+ potassium transporter 14 544 2.0E-210 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YPTB_RS00100 1bd527219bce0cef78a5f30016e5715b 622 PANTHER PTHR30540 16 622 1.7E-288 T 22-04-2016 YPTB_RS00100 1bd527219bce0cef78a5f30016e5715b 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 549 5.5E-185 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YPTB_RS00100 1bd527219bce0cef78a5f30016e5715b 622 PANTHER PTHR30540:SF7 16 622 1.7E-288 T 22-04-2016 YPTB_RS12845 bd7bf8930dab033b662994f9233a31d0 296 SUPERFAMILY SSF160964 4 39 6.41E-5 T 22-04-2016 YPTB_RS12845 bd7bf8930dab033b662994f9233a31d0 296 PANTHER PTHR30193:SF1 3 292 5.1E-158 T 22-04-2016 YPTB_RS12845 bd7bf8930dab033b662994f9233a31d0 296 SUPERFAMILY SSF161098 50 273 1.1E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12845 bd7bf8930dab033b662994f9233a31d0 296 PANTHER PTHR30193 3 292 5.1E-158 T 22-04-2016 YPTB_RS12845 bd7bf8930dab033b662994f9233a31d0 296 Gene3D G3DSA:1.10.3720.10 56 282 8.5E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12845 bd7bf8930dab033b662994f9233a31d0 296 Gene3D G3DSA:1.20.58.370 4 39 7.0E-5 T 22-04-2016 YPTB_RS12845 bd7bf8930dab033b662994f9233a31d0 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 275 6.8E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF69742 1 158 7.59E-48 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 Gene3D G3DSA:3.40.50.720 184 358 2.9E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.1E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.703 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 3.0E-23 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF51735 162 315 8.21E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.9E-158 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089 272 359 1.5E-155 T 22-04-2016 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089 18 256 1.5E-155 T 22-04-2016 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF69075 317 418 1.01E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089:SF3 272 359 1.5E-155 T 22-04-2016 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089:SF3 18 256 1.5E-155 T 22-04-2016 YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 5.9E-49 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPTB_RS10990 7c741fb31bf31daf95a6f7eb507423fc 420 PIRSF PIRSF000445 1 420 4.2E-155 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPTB_RS19065 9e2c20bd46ee3d10fe826b7d9761d384 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 25 177 4.9E-69 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS19065 9e2c20bd46ee3d10fe826b7d9761d384 187 PIRSF PIRSF006118 12 187 9.7E-73 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS19065 9e2c20bd46ee3d10fe826b7d9761d384 187 Gene3D G3DSA:3.40.50.1000 17 179 1.2E-47 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS19065 9e2c20bd46ee3d10fe826b7d9761d384 187 SUPERFAMILY SSF56784 21 179 2.93E-41 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS19065 9e2c20bd46ee3d10fe826b7d9761d384 187 PANTHER PTHR21485 9 183 2.8E-70 T 22-04-2016 YPTB_RS19065 9e2c20bd46ee3d10fe826b7d9761d384 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 157 3.3E-10 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS11785 643870097892740544330e9805f82039 644 SMART SM00357 23 79 1.5E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS11785 643870097892740544330e9805f82039 644 Gene3D G3DSA:2.40.50.140 564 639 2.6E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11785 643870097892740544330e9805f82039 644 Pfam PF00575 S1 RNA binding domain 560 639 9.7E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS11785 643870097892740544330e9805f82039 644 Pfam PF08206 Ribonuclease B OB domain 24 80 5.8E-19 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain YPTB_RS11785 643870097892740544330e9805f82039 644 SUPERFAMILY SSF50249 560 643 4.05E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11785 643870097892740544330e9805f82039 644 SMART SM00955 189 517 1.5E-124 T 22-04-2016 YPTB_RS11785 643870097892740544330e9805f82039 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.242 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YPTB_RS11785 643870097892740544330e9805f82039 644 PANTHER PTHR23355 21 643 0.0 T 22-04-2016 YPTB_RS11785 643870097892740544330e9805f82039 644 SUPERFAMILY SSF50249 171 556 9.14E-116 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11785 643870097892740544330e9805f82039 644 SUPERFAMILY SSF50249 8 80 1.52E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11785 643870097892740544330e9805f82039 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 3.4E-224 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YPTB_RS11785 643870097892740544330e9805f82039 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site YPTB_RS11785 643870097892740544330e9805f82039 644 SUPERFAMILY SSF50249 83 171 1.09E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS11785 643870097892740544330e9805f82039 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YPTB_RS11785 643870097892740544330e9805f82039 644 Pfam PF00773 RNB domain 189 516 2.8E-86 T 22-04-2016 YPTB_RS11785 643870097892740544330e9805f82039 644 PANTHER PTHR23355:SF37 21 643 0.0 T 22-04-2016 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 Pfam PF00572 Ribosomal protein L13 15 138 1.1E-56 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 SUPERFAMILY SSF52161 1 140 2.35E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.2E-67 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.544 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 PANTHER PTHR11545 1 142 2.4E-81 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 PIRSF PIRSF002181 1 142 1.0E-50 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18995 5d73bf0d848d5778405ad66e5a089275 142 Gene3D G3DSA:3.90.1180.10 3 141 9.0E-65 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 152 170 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 128 151 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 73 94 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 108 125 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 171 192 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 Pfam PF01145 SPFH domain / Band 7 family 22 201 2.6E-31 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 SMART SM00244 18 176 8.0E-59 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 PANTHER PTHR10264:SF27 1 303 7.8E-125 T 22-04-2016 YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 SUPERFAMILY SSF117892 49 183 1.11E-40 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS05655 c742e17a8d0fdf4bde1691e6c777e3ca 304 PANTHER PTHR10264 1 303 7.8E-125 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS14375 3be0f884fdfa23ff8a49b2eddaab78ff 679 Pfam PF09972 Predicted membrane protein (DUF2207) 52 607 2.7E-68 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 SUPERFAMILY SSF143800 1 80 4.32E-21 T 22-04-2016 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 PANTHER PTHR33280:SF3 1 81 5.8E-43 T 22-04-2016 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 Pfam PF01197 Ribosomal protein L31 1 78 1.6E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.48 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 PANTHER PTHR33280 1 81 5.8E-43 T 22-04-2016 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.5E-15 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.9E-13 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.9E-13 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05430 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-13 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 SUPERFAMILY SSF46785 3 83 1.51E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:3.40.190.10 92 179 1.1E-15 T 22-04-2016 YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 PANTHER PTHR30537:SF29 1 298 8.2E-207 T 22-04-2016 YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:1.10.10.10 2 83 1.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 SUPERFAMILY SSF53850 89 298 5.07E-36 T 22-04-2016 YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 PANTHER PTHR30537 1 298 8.2E-207 T 22-04-2016 YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:3.40.190.10 180 263 1.9E-20 T 22-04-2016 YPTB_RS11375 8b3c4c7ede4b98601591ea9eb14a98e2 301 Pfam PF03466 LysR substrate binding domain 88 295 3.6E-34 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 4.2E-283 T 22-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 Pfam PF05199 GMC oxidoreductase 393 527 5.5E-42 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 SUPERFAMILY SSF54373 295 477 7.26E-63 T 22-04-2016 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 PANTHER PTHR11552 1 553 1.1E-261 T 22-04-2016 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 SUPERFAMILY SSF51905 1 293 4.32E-90 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 SUPERFAMILY SSF51905 476 535 4.32E-90 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 PIRSF PIRSF000137 1 542 1.2E-142 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 61.665 T 22-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 Gene3D G3DSA:3.50.50.60 2 127 1.1E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 Gene3D G3DSA:3.50.50.60 470 532 1.1E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 Gene3D G3DSA:3.50.50.60 190 318 1.1E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 Pfam PF00732 GMC oxidoreductase 3 300 3.0E-98 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 YPTB_RS06625 d980c0fb083315ca423298dd5ca54086 567 PANTHER PTHR11552:SF135 1 553 1.1E-261 T 22-04-2016 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 6.4E-154 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 SUPERFAMILY SSF53383 17 399 2.66E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 Pfam PF00202 Aminotransferase class-III 24 398 2.0E-135 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 Gene3D G3DSA:3.90.1150.10 306 400 3.8E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 Gene3D G3DSA:3.90.1150.10 13 59 3.8E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 46.197 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 Gene3D G3DSA:3.40.640.10 60 302 1.6E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 PANTHER PTHR11986:SF71 1 403 5.6E-218 T 22-04-2016 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 5.4E-209 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 YPTB_RS20180 76efd4ea5461300901bbc8195958b558 405 PANTHER PTHR11986 1 403 5.6E-218 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 PANTHER PTHR10366 316 354 2.2E-153 T 22-04-2016 YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 PANTHER PTHR10366 3 288 2.2E-153 T 22-04-2016 YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 SUPERFAMILY SSF51735 2 288 2.72E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 SUPERFAMILY SSF51735 318 353 2.72E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 PANTHER PTHR10366:SF382 3 288 2.2E-153 T 22-04-2016 YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 Gene3D G3DSA:3.40.50.720 3 276 1.1E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 Pfam PF07993 Male sterility protein 6 237 4.2E-33 T 22-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 YPTB_RS08640 49ee359177507d520f74dbbcf36e61a7 369 PANTHER PTHR10366:SF382 316 354 2.2E-153 T 22-04-2016 YPTB_RS20915 67367d9529475122751866fabfb23751 210 Gene3D G3DSA:3.40.50.300 9 138 1.9E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20915 67367d9529475122751866fabfb23751 210 SUPERFAMILY SSF52540 26 172 1.47E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SUPERFAMILY SSF55785 144 247 2.97E-22 T 22-04-2016 IPR000014 PAS domain YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 Pfam PF08448 PAS fold 145 248 1.7E-12 T 22-04-2016 IPR013656 PAS fold-4 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 281 430 9.1E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 Pfam PF13426 PAS domain 24 126 1.9E-15 T 22-04-2016 IPR000014 PAS domain YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SUPERFAMILY SSF55785 23 124 2.62E-24 T 22-04-2016 IPR000014 PAS domain YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SUPERFAMILY SSF58104 216 429 2.22E-47 T 22-04-2016 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SMART SM00086 85 127 1.3E-7 T 22-04-2016 IPR001610 PAC motif YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SMART SM00086 207 249 5.5E-4 T 22-04-2016 IPR001610 PAC motif YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 Gene3D G3DSA:1.10.287.950 245 427 2.0E-42 T 22-04-2016 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 345 1.3E-15 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 347 376 1.3E-15 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SMART SM00283 238 428 4.9E-10 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 PANTHER PTHR24422 16 430 3.5E-247 T 22-04-2016 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 Gene3D G3DSA:3.30.450.20 144 244 1.6E-20 T 22-04-2016 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 Gene3D G3DSA:3.30.450.20 23 126 3.7E-24 T 22-04-2016 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 132 6.6E-18 T 22-04-2016 IPR000014 PAS domain YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 254 7.7E-15 T 22-04-2016 IPR000014 PAS domain YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 PANTHER PTHR24422:SF10 16 430 3.5E-247 T 22-04-2016 YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SMART SM00091 132 199 0.0059 T 22-04-2016 IPR000014 PAS domain YPTB_RS13850 099ed57886a3f813e6ba715f64fb23bc 434 SMART SM00091 11 79 1.9 T 22-04-2016 IPR000014 PAS domain YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 SUPERFAMILY SSF53474 421 662 4.32E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PANTHER PTHR11757 1 683 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 411 1.6E-101 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 Pfam PF00326 Prolyl oligopeptidase family 470 681 4.4E-70 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 SUPERFAMILY SSF50993 1 413 3.92E-91 T 22-04-2016 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 Gene3D G3DSA:2.130.10.120 76 414 6.0E-103 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PANTHER PTHR11757:SF3 1 683 0.0 T 22-04-2016 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 Gene3D G3DSA:3.40.50.1820 423 665 1.1E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 507 526 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 453 471 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 537 557 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 610 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 613 635 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPTB_RS09120 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 479 503 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPTB_RS09205 29e41de5df45b91f38f9d91c86842c89 232 PANTHER PTHR36307 80 231 1.3E-32 T 22-04-2016 YPTB_RS09205 29e41de5df45b91f38f9d91c86842c89 232 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 98 230 6.2E-44 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTB_RS09205 29e41de5df45b91f38f9d91c86842c89 232 SMART SM00858 108 170 1.4E-14 T 22-04-2016 IPR013974 SAF domain YPTB_RS09205 29e41de5df45b91f38f9d91c86842c89 232 Pfam PF13144 Chaperone for flagella basal body P-ring formation 38 230 4.5E-55 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTB_RS04545 65d38d18903c4744b36abc47b992ca86 446 PANTHER PTHR23521 2 418 3.5E-205 T 22-04-2016 YPTB_RS04545 65d38d18903c4744b36abc47b992ca86 446 SUPERFAMILY SSF103473 6 370 5.62E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS04545 65d38d18903c4744b36abc47b992ca86 446 Gene3D G3DSA:1.20.1250.20 203 370 7.7E-21 T 22-04-2016 YPTB_RS04545 65d38d18903c4744b36abc47b992ca86 446 PANTHER PTHR23521:SF2 2 418 3.5E-205 T 22-04-2016 YPTB_RS04545 65d38d18903c4744b36abc47b992ca86 446 Gene3D G3DSA:1.20.1250.20 7 179 1.0E-12 T 22-04-2016 YPTB_RS04545 65d38d18903c4744b36abc47b992ca86 446 Pfam PF07690 Major Facilitator Superfamily 12 286 8.3E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS20930 e600c32d7d462c01ac42f14f8d51356d 205 Pfam PF04471 Restriction endonuclease 65 182 1.0E-36 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 YPTB_RS20930 e600c32d7d462c01ac42f14f8d51356d 205 Gene3D G3DSA:3.40.1350.10 63 186 1.0E-17 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 YPTB_RS20930 e600c32d7d462c01ac42f14f8d51356d 205 PANTHER PTHR30015:SF4 1 205 5.1E-63 T 22-04-2016 YPTB_RS20930 e600c32d7d462c01ac42f14f8d51356d 205 PANTHER PTHR30015 1 205 5.1E-63 T 22-04-2016 YPTB_RS20930 e600c32d7d462c01ac42f14f8d51356d 205 SUPERFAMILY SSF52980 69 184 9.12E-18 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:1.10.150.300 131 200 4.8E-29 T 22-04-2016 IPR023192 TGS-like domain YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.40.50.300 4 130 4.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.40.50.300 201 267 4.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 3.6E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 PIRSF PIRSF006641 1 363 1.8E-157 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.2E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 SUPERFAMILY SSF81271 279 359 6.1E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.10.20.30 268 363 8.9E-50 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 SUPERFAMILY SSF52540 3 301 4.5E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.0E-174 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 PANTHER PTHR23305 1 363 1.5E-215 T 22-04-2016 YPTB_RS10950 6a366f01dea9f29b07f10c2fb0395016 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.741 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YPTB_RS09030 ecc59f0de2f3424abf66b850bfd61367 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 1.4E-113 T 22-04-2016 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 YPTB_RS09030 ecc59f0de2f3424abf66b850bfd61367 254 PANTHER PTHR11820:SF8 27 249 1.0E-127 T 22-04-2016 YPTB_RS09030 ecc59f0de2f3424abf66b850bfd61367 254 Gene3D G3DSA:3.90.850.10 39 246 1.4E-75 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS09030 ecc59f0de2f3424abf66b850bfd61367 254 PANTHER PTHR11820 27 249 1.0E-127 T 22-04-2016 YPTB_RS09030 ecc59f0de2f3424abf66b850bfd61367 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 243 2.1E-58 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS09030 ecc59f0de2f3424abf66b850bfd61367 254 SUPERFAMILY SSF56529 38 245 2.09E-71 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS06025 565559992bb320543a67f2f490ad5769 87 Gene3D G3DSA:3.30.70.1460 1 87 1.8E-37 T 22-04-2016 IPR027471 YbeD-like domain YPTB_RS06025 565559992bb320543a67f2f490ad5769 87 PANTHER PTHR38036:SF1 1 87 3.1E-43 T 22-04-2016 YPTB_RS06025 565559992bb320543a67f2f490ad5769 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.956 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 YPTB_RS06025 565559992bb320543a67f2f490ad5769 87 SUPERFAMILY SSF117991 1 87 3.92E-32 T 22-04-2016 IPR027471 YbeD-like domain YPTB_RS06025 565559992bb320543a67f2f490ad5769 87 PANTHER PTHR38036 1 87 3.1E-43 T 22-04-2016 YPTB_RS06025 565559992bb320543a67f2f490ad5769 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 7.9E-31 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 Pfam PF00472 RF-1 domain 216 321 9.6E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 Gene3D G3DSA:3.30.160.20 215 287 2.5E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 5.2E-172 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 Gene3D G3DSA:1.20.58.410 6 93 3.9E-18 T 22-04-2016 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 SMART SM00937 63 178 3.0E-70 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.506 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 PANTHER PTHR11075 1 356 4.8E-176 T 22-04-2016 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 SUPERFAMILY SSF75620 12 353 3.27E-135 T 22-04-2016 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 PANTHER PTHR11075:SF9 1 356 4.8E-176 T 22-04-2016 YPTB_RS10995 d7dbc51a536699789611ab77d5070861 360 Pfam PF03462 PCRF domain 12 203 1.0E-74 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YPTB_RS07100 8a07dea23a2542567c39b7448c57f846 198 PIRSF PIRSF012337 1 196 1.0E-62 T 22-04-2016 IPR014462 Phage-associated protein Gp45 YPTB_RS07100 8a07dea23a2542567c39b7448c57f846 198 Pfam PF06890 Bacteriophage Mu Gp45 protein 21 176 1.7E-44 T 22-04-2016 IPR014462 Phage-associated protein Gp45 YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 SMART SM00382 163 288 0.0088 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 Gene3D G3DSA:3.30.450.90 35 140 1.4E-4 T 22-04-2016 YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 PANTHER PTHR30486:SF6 38 371 1.2E-171 T 22-04-2016 YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 Gene3D G3DSA:3.40.50.300 145 370 4.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 PANTHER PTHR30486 38 371 1.2E-171 T 22-04-2016 YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 Pfam PF00437 Type II/IV secretion system protein 148 311 2.5E-41 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 46 371 1.5E-130 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 234 248 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPTB_RS17400 4ed350e09e1b9468faab3083d816ffda 374 SUPERFAMILY SSF52540 25 369 1.85E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 SUPERFAMILY SSF49584 156 241 5.89E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PANTHER PTHR30251 1 243 6.6E-140 T 22-04-2016 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 SUPERFAMILY SSF49354 23 149 3.92E-42 T 22-04-2016 IPR008962 PapD-like YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Gene3D G3DSA:2.60.40.1070 153 237 1.1E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 29 38 2.4E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 106 123 2.4E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 131 146 2.4E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 170 185 2.4E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 78 99 2.4E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 237 1.5E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PANTHER PTHR30251:SF8 1 243 6.6E-140 T 22-04-2016 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 149 8.2E-42 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS00965 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Gene3D G3DSA:2.60.40.360 28 149 2.9E-42 T 22-04-2016 IPR008962 PapD-like YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 PANTHER PTHR11964 1 376 1.3E-288 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 11 135 8.8E-51 T 22-04-2016 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.2E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.731 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 3.7E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 111 232 3.49E-52 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 233 382 7.46E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 3 109 1.06E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 PIRSF PIRSF000497 1 381 2.8E-175 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 136 233 3.3E-44 T 22-04-2016 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 244 381 7.8E-71 T 22-04-2016 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.7E-199 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS17350 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.3E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPTB_RS18750 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 SUPERFAMILY SSF53300 4 161 6.82E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18750 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 SMART SM00327 3 182 3.4E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18750 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 Pfam PF00092 von Willebrand factor type A domain 6 161 4.9E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18750 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 Gene3D G3DSA:3.40.50.410 6 168 2.8E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18750 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 PIRSF PIRSF020634 1 211 2.9E-90 T 22-04-2016 IPR011392 Tellurite resistance, TerY YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 SMART SM00382 33 222 7.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 SMART SM00382 287 483 7.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 SUPERFAMILY SSF52540 8 231 1.57E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 Gene3D G3DSA:3.40.50.300 8 232 3.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 Pfam PF00005 ABC transporter 279 434 1.8E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 Pfam PF00005 ABC transporter 24 174 1.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 SUPERFAMILY SSF52540 250 489 3.71E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 Gene3D G3DSA:3.40.50.300 258 495 5.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 PANTHER PTHR24220 10 389 1.1E-187 T 22-04-2016 YPTB_RS04510 35d4c43437a6f1ddd638c471b555b67d 507 PANTHER PTHR24220:SF308 10 389 1.1E-187 T 22-04-2016 YPTB_RS21170 3b5dc3ffe5e2b7fef8e6dd386bebd33d 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 7.9E-33 T 22-04-2016 IPR021230 Protein of unknown function DUF2810 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SUPERFAMILY SSF49373 410 525 2.88E-10 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SMART SM00634 531 623 2.0E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SMART SM00634 640 726 4.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SMART SM00634 732 827 1.5E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SUPERFAMILY SSF49373 838 928 3.92E-24 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Pfam PF02369 Bacterial Ig-like domain (group 1) 646 724 1.9E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Pfam PF02369 Bacterial Ig-like domain (group 1) 534 622 4.1E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Pfam PF02369 Bacterial Ig-like domain (group 1) 740 824 1.9E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Gene3D G3DSA:2.60.40.1080 851 929 2.6E-25 T 22-04-2016 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Gene3D G3DSA:3.10.100.10 931 1024 3.3E-22 T 22-04-2016 IPR016186 C-type lectin-like YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PANTHER PTHR39576 9 504 1.6E-154 T 22-04-2016 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PANTHER PTHR39576 523 818 1.6E-154 T 22-04-2016 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SUPERFAMILY SSF49373 537 628 9.03E-20 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Pfam PF09134 Invasin, domain 3 410 529 5.1E-18 T 22-04-2016 IPR015217 Invasin, domain 3 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SUPERFAMILY SSF49373 741 827 9.03E-12 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Gene3D G3DSA:2.60.40.920 638 731 6.1E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Gene3D G3DSA:2.60.40.920 740 826 8.9E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PANTHER PTHR39576:SF2 9 504 1.6E-154 T 22-04-2016 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PANTHER PTHR39576:SF2 523 818 1.6E-154 T 22-04-2016 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Pfam PF11924 Invasin beta-domain of outer membrane 26 300 7.5E-101 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Gene3D G3DSA:2.60.40.920 533 626 1.2E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 Gene3D G3DSA:2.60.40.920 411 525 2.4E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PRINTS PR01369 Intimin signature 180 199 8.7E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PRINTS PR01369 Intimin signature 248 267 8.7E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PRINTS PR01369 Intimin signature 152 167 8.7E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 PRINTS PR01369 Intimin signature 335 347 8.7E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS08650 24a52c46814aae9bfcf87dacc32ee884 1024 SUPERFAMILY SSF49373 642 730 1.31E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 314 9.2E-126 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 SUPERFAMILY SSF53474 7 313 2.1E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 Gene3D G3DSA:3.40.50.1820 10 301 1.1E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 Pfam PF00561 alpha/beta hydrolase fold 41 297 3.9E-31 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 3.9E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 3.9E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 3.9E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PANTHER PTHR10992 1 177 8.3E-149 T 22-04-2016 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PANTHER PTHR10992 214 314 8.3E-149 T 22-04-2016 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PANTHER PTHR10992:SF860 1 177 8.3E-149 T 22-04-2016 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PANTHER PTHR10992:SF860 214 314 8.3E-149 T 22-04-2016 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 3.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 3.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS09125 61b16e51e46931d3740c2b1238472e22 316 PIRSF PIRSF006431 2 316 4.1E-139 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YPTB_RS21380 89affb6eef1f9bf8686cfa0e48def073 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 1.5E-84 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 YPTB_RS21380 89affb6eef1f9bf8686cfa0e48def073 295 PANTHER PTHR30425 5 295 1.1E-137 T 22-04-2016 YPTB_RS21380 89affb6eef1f9bf8686cfa0e48def073 295 SUPERFAMILY SSF161098 31 286 7.85E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21380 89affb6eef1f9bf8686cfa0e48def073 295 PANTHER PTHR30425:SF0 5 295 1.1E-137 T 22-04-2016 YPTB_RS21380 89affb6eef1f9bf8686cfa0e48def073 295 Gene3D G3DSA:1.10.3720.10 28 294 1.1E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21380 89affb6eef1f9bf8686cfa0e48def073 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 1.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15495 cec1f24e83f5090f01eb7aca30558e5f 453 SUPERFAMILY SSF63520 258 359 1.7E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 YPTB_RS15495 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185:SF4 16 110 4.7E-12 T 22-04-2016 YPTB_RS15495 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185:SF4 141 355 4.7E-12 T 22-04-2016 YPTB_RS15495 cec1f24e83f5090f01eb7aca30558e5f 453 Pfam PF00874 PRD domain 266 355 8.5E-16 T 22-04-2016 IPR011608 PRD domain GO:0006355 YPTB_RS15495 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185 16 110 4.7E-12 T 22-04-2016 YPTB_RS15495 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185 141 355 4.7E-12 T 22-04-2016 YPTB_RS15495 cec1f24e83f5090f01eb7aca30558e5f 453 Gene3D G3DSA:1.10.1790.10 259 357 1.4E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 2.4E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.517 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 234 261 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 125 147 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 48 69 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 262 288 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 162 191 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 90 114 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 31 47 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 SUPERFAMILY SSF102886 5 302 7.59E-139 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PIRSF PIRSF000166 2 303 9.3E-128 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 PANTHER PTHR10755 2 303 2.5E-193 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS14930 8ecb64d120c024a3322f2028315e855a 309 Gene3D G3DSA:3.40.1500.10 5 302 4.3E-135 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS18495 4a90ab0d1e7b337380f9cf33336545d7 151 SUPERFAMILY SSF160631 48 142 4.51E-5 T 22-04-2016 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 76 96 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 227 252 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 203 224 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 96 115 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 182 202 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 57 76 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PANTHER PTHR30587:SF0 12 255 5.1E-116 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 182 197 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 Pfam PF00813 FliP family 59 249 2.3E-74 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 59 252 7.4E-73 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PANTHER PTHR30587 12 255 5.1E-116 T 22-04-2016 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 127 141 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 127 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 243 253 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 55 64 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS18125 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 175 187 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPTB_RS15940 578681d76e08ed7b6d926caf2ddf2a55 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 261 1.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15940 578681d76e08ed7b6d926caf2ddf2a55 268 Gene3D G3DSA:1.10.3720.10 64 262 3.1E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15940 578681d76e08ed7b6d926caf2ddf2a55 268 PANTHER PTHR30465 1 267 1.9E-203 T 22-04-2016 YPTB_RS15940 578681d76e08ed7b6d926caf2ddf2a55 268 SUPERFAMILY SSF161098 65 256 4.97E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15940 578681d76e08ed7b6d926caf2ddf2a55 268 PANTHER PTHR30465:SF50 1 267 1.9E-203 T 22-04-2016 YPTB_RS19265 7ad248668a8ac0b339c193b2a9746291 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.197 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS19265 7ad248668a8ac0b339c193b2a9746291 197 SUPERFAMILY SSF52972 2 184 2.94E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS19265 7ad248668a8ac0b339c193b2a9746291 197 PANTHER PTHR11746 120 190 4.1E-15 T 22-04-2016 YPTB_RS19265 7ad248668a8ac0b339c193b2a9746291 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 4.0E-63 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS19265 7ad248668a8ac0b339c193b2a9746291 197 Gene3D G3DSA:3.90.950.10 2 185 9.3E-68 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS19265 7ad248668a8ac0b339c193b2a9746291 197 PIRSF PIRSF006305 1 191 8.5E-50 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS19265 7ad248668a8ac0b339c193b2a9746291 197 Pfam PF02545 Maf-like protein 4 184 5.7E-57 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS14595 8e6bb10192dd33ecb71acf177f8fca42 223 PANTHER PTHR41164:SF1 1 223 7.1E-80 T 22-04-2016 YPTB_RS14595 8e6bb10192dd33ecb71acf177f8fca42 223 Gene3D G3DSA:3.40.50.10070 46 140 7.4E-6 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPTB_RS14595 8e6bb10192dd33ecb71acf177f8fca42 223 Pfam PF03783 Curli production assembly/transport component CsgG 43 221 3.6E-33 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 YPTB_RS14595 8e6bb10192dd33ecb71acf177f8fca42 223 SUPERFAMILY SSF52964 44 144 6.93E-9 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPTB_RS14595 8e6bb10192dd33ecb71acf177f8fca42 223 PANTHER PTHR41164 1 223 7.1E-80 T 22-04-2016 YPTB_RS18055 0ff635671c3af4b0360eb8493163b97c 141 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS18055 0ff635671c3af4b0360eb8493163b97c 141 Pfam PF00460 Flagella basal body rod protein 8 31 4.7E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS18055 0ff635671c3af4b0360eb8493163b97c 141 PANTHER PTHR30435 1 140 3.2E-62 T 22-04-2016 YPTB_RS18055 0ff635671c3af4b0360eb8493163b97c 141 PANTHER PTHR30435:SF2 1 140 3.2E-62 T 22-04-2016 YPTB_RS18055 0ff635671c3af4b0360eb8493163b97c 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 138 1.6E-9 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS18055 0ff635671c3af4b0360eb8493163b97c 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 139 2.2E-40 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 Gene3D G3DSA:3.10.20.70 3 105 3.0E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852 1 138 3.2E-275 T 22-04-2016 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852 160 469 3.2E-275 T 22-04-2016 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 Gene3D G3DSA:3.30.590.10 106 455 4.8E-140 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.7E-215 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-137 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 SMART SM01230 102 379 1.4E-148 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 SUPERFAMILY SSF55931 102 468 7.65E-138 T 22-04-2016 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.9E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 SUPERFAMILY SSF54368 3 100 1.19E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852:SF15 1 138 3.2E-275 T 22-04-2016 YPTB_RS00215 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852:SF15 160 469 3.2E-275 T 22-04-2016 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 SUPERFAMILY SSF46955 2 121 4.76E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 PANTHER PTHR30204 1 123 1.8E-59 T 22-04-2016 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 PANTHER PTHR30204:SF18 1 123 1.8E-59 T 22-04-2016 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 Gene3D G3DSA:1.10.1660.10 1 56 5.0E-28 T 22-04-2016 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 Gene3D G3DSA:1.10.1660.10 57 134 1.1E-30 T 22-04-2016 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 Pfam PF13411 MerR HTH family regulatory protein 3 69 3.5E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 2.6E-72 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 YPTB_RS19880 5e8c0bd933511bfb8ecdf616f430e417 141 SMART SM00422 2 71 1.9E-31 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS12795 2123b924a10ff3801504b7bc7c0218e8 294 SUPERFAMILY SSF81345 5 261 1.31E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS12795 2123b924a10ff3801504b7bc7c0218e8 294 PANTHER PTHR30477:SF13 2 294 4.9E-154 T 22-04-2016 YPTB_RS12795 2123b924a10ff3801504b7bc7c0218e8 294 PANTHER PTHR30477 2 294 4.9E-154 T 22-04-2016 YPTB_RS12795 2123b924a10ff3801504b7bc7c0218e8 294 Pfam PF00950 ABC 3 transport family 10 265 1.5E-89 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YPTB_RS12795 2123b924a10ff3801504b7bc7c0218e8 294 Gene3D G3DSA:1.10.3470.10 38 241 1.1E-9 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PANTHER PTHR21060:SF15 2 398 1.0E-283 T 22-04-2016 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 SUPERFAMILY SSF53067 160 398 6.11E-85 T 22-04-2016 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PANTHER PTHR21060 2 398 1.0E-283 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 6.3E-184 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 Gene3D G3DSA:3.30.420.40 89 207 1.1E-8 T 22-04-2016 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PIRSF PIRSF000722 2 400 1.1E-144 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 Gene3D G3DSA:3.30.420.40 208 398 5.1E-75 T 22-04-2016 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 189.068 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 SUPERFAMILY SSF53067 4 199 2.07E-63 T 22-04-2016 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 Pfam PF00871 Acetokinase family 6 393 1.2E-175 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.56E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.56E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.56E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.56E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.56E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS14090 4c67b82eb21c479c36b7194e5ec98548 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.56E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 Gene3D G3DSA:3.30.428.10 176 345 3.2E-75 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 PANTHER PTHR11943:SF2 3 350 3.2E-218 T 22-04-2016 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 SUPERFAMILY SSF54197 4 177 3.69E-72 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 SUPERFAMILY SSF54197 179 345 1.7E-54 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 PIRSF PIRSF000808 1 341 6.2E-122 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 346 5.3E-199 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 346 2.7E-68 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 6.2E-71 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 Gene3D G3DSA:3.30.428.10 45 175 6.4E-58 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPTB_RS06490 681f8727fdec15b8108370597c5aaf32 350 PANTHER PTHR11943 3 350 3.2E-218 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 SUPERFAMILY SSF53383 1 421 7.2E-134 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 Gene3D G3DSA:3.90.1150.10 332 421 6.6E-61 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 Gene3D G3DSA:3.90.1150.10 3 61 6.6E-61 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 3.0E-185 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 Pfam PF00202 Aminotransferase class-III 27 420 7.1E-129 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 50.921 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 Gene3D G3DSA:3.40.640.10 62 329 3.9E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 PANTHER PTHR11986 8 421 1.8E-218 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPTB_RS06550 03d09d0fe856a5c56e7371c45e656f56 426 PANTHER PTHR11986:SF8 8 421 1.8E-218 T 22-04-2016 YPTB_RS12825 fddea5d56827c6150f88f1c1fbcf3842 110 PANTHER PTHR40112 1 110 2.5E-14 T 22-04-2016 YPTB_RS12825 fddea5d56827c6150f88f1c1fbcf3842 110 PIRSF PIRSF029883 3 110 6.6E-29 T 22-04-2016 IPR025499 Pectin degradation protein KdgF UniPathway: UPA00545 YPTB_RS12825 fddea5d56827c6150f88f1c1fbcf3842 110 PANTHER PTHR40112:SF1 1 110 2.5E-14 T 22-04-2016 YPTB_RS12825 fddea5d56827c6150f88f1c1fbcf3842 110 Gene3D G3DSA:2.60.120.10 2 110 3.2E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS12825 fddea5d56827c6150f88f1c1fbcf3842 110 SUPERFAMILY SSF51182 6 108 3.22E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS12825 fddea5d56827c6150f88f1c1fbcf3842 110 Pfam PF07883 Cupin domain 35 92 1.5E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YPTB_RS02080 050afd9551a756d81f171b8a01f8ea3a 192 Pfam PF02342 TerD domain 1 187 2.2E-86 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPTB_RS02080 050afd9551a756d81f171b8a01f8ea3a 192 PANTHER PTHR32097 1 190 1.9E-92 T 22-04-2016 YPTB_RS02080 050afd9551a756d81f171b8a01f8ea3a 192 Gene3D G3DSA:2.60.60.30 19 184 4.6E-75 T 22-04-2016 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 SUPERFAMILY SSF53383 5 353 4.21E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 55.533 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 353 7.7E-122 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 PANTHER PTHR11751:SF398 9 352 4.2E-104 T 22-04-2016 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 Gene3D G3DSA:3.40.640.10 50 255 1.6E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 Pfam PF00155 Aminotransferase class I and II 47 352 6.3E-61 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 PANTHER PTHR11751 9 352 4.2E-104 T 22-04-2016 YPTB_RS08575 261e642680f5170781253e16b10d50ac 382 Gene3D G3DSA:3.90.1150.10 256 353 4.7E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 Pfam PF00809 Pterin binding enzyme 18 257 1.7E-89 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 PANTHER PTHR20941:SF1 13 277 5.4E-130 T 22-04-2016 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 Gene3D G3DSA:3.20.20.20 12 274 3.9E-111 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 PANTHER PTHR20941 13 277 5.4E-130 T 22-04-2016 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 SUPERFAMILY SSF51717 5 274 2.49E-106 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPTB_RS02715 d47f312a4135193168b2e794af9e0eae 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 1.6E-102 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS12190 3137afbf4b55322eaeb6880c8f056c89 192 Gene3D G3DSA:2.40.128.110 23 190 1.5E-59 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPTB_RS12190 3137afbf4b55322eaeb6880c8f056c89 192 PANTHER PTHR34406:SF1 1 191 1.8E-64 T 22-04-2016 YPTB_RS12190 3137afbf4b55322eaeb6880c8f056c89 192 SUPERFAMILY SSF101874 23 189 7.32E-56 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPTB_RS12190 3137afbf4b55322eaeb6880c8f056c89 192 PANTHER PTHR34406 1 191 1.8E-64 T 22-04-2016 YPTB_RS12190 3137afbf4b55322eaeb6880c8f056c89 192 SMART SM00867 25 189 1.9E-70 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPTB_RS12190 3137afbf4b55322eaeb6880c8f056c89 192 Pfam PF04264 YceI-like domain 26 187 2.5E-40 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPTB_RS12190 3137afbf4b55322eaeb6880c8f056c89 192 Hamap MF_00780 Protein YceI [yceI]. 2 192 45.01 T 22-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI YPTB_RS02220 ecf501b2c090f4ef379db90eb5c3b3e0 418 Pfam PF06134 L-rhamnose isomerase (RhaA) 4 418 5.2E-228 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 YPTB_RS02220 ecf501b2c090f4ef379db90eb5c3b3e0 418 SUPERFAMILY SSF51658 5 418 2.19E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS02220 ecf501b2c090f4ef379db90eb5c3b3e0 418 PANTHER PTHR30268 1 418 1.1E-226 T 22-04-2016 YPTB_RS02220 ecf501b2c090f4ef379db90eb5c3b3e0 418 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 418 276.293 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 YPTB_RS02220 ecf501b2c090f4ef379db90eb5c3b3e0 418 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 22-04-2016 YPTB_RS02220 ecf501b2c090f4ef379db90eb5c3b3e0 418 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 9.1E-236 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 YPTB_RS02220 ecf501b2c090f4ef379db90eb5c3b3e0 418 Gene3D G3DSA:3.20.20.150 2 418 1.1E-222 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 Gene3D G3DSA:3.40.50.300 230 349 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 Gene3D G3DSA:3.40.50.300 1 171 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.7E-132 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 342 8.0E-39 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 99.109 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 SUPERFAMILY SSF52540 1 340 1.59E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 PANTHER PTHR32182 1 356 1.5E-76 T 22-04-2016 YPTB_RS21285 813609c5d77e5829695fca2abef2848f 361 PANTHER PTHR32182:SF0 1 356 1.5E-76 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 SUPERFAMILY SSF47413 3 70 1.77E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 Gene3D G3DSA:2.10.109.10 134 225 9.4E-32 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 SUPERFAMILY SSF51306 97 222 1.45E-28 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 Gene3D G3DSA:1.10.260.40 4 70 4.2E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 PANTHER PTHR33516:SF3 99 221 9.3E-50 T 22-04-2016 YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 SMART SM00530 8 64 8.2E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 Pfam PF01381 Helix-turn-helix 11 64 6.7E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 Pfam PF00717 Peptidase S24-like 141 213 2.7E-17 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YPTB_RS09855 0e5a6e970c568fc73643772b816caad4 228 PANTHER PTHR33516 99 221 9.3E-50 T 22-04-2016 YPTB_RS11400 8c5f7dd02b52866b1314e6e53d553ff7 291 PIRSF PIRSF016020 8 291 1.9E-55 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 YPTB_RS11400 8c5f7dd02b52866b1314e6e53d553ff7 291 Gene3D G3DSA:2.70.98.10 11 286 8.5E-86 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPTB_RS11400 8c5f7dd02b52866b1314e6e53d553ff7 291 PANTHER PTHR11122 6 291 2.5E-135 T 22-04-2016 YPTB_RS11400 8c5f7dd02b52866b1314e6e53d553ff7 291 Pfam PF01263 Aldose 1-epimerase 28 275 3.7E-45 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 YPTB_RS11400 8c5f7dd02b52866b1314e6e53d553ff7 291 SUPERFAMILY SSF74650 8 285 1.65E-71 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPTB_RS11400 8c5f7dd02b52866b1314e6e53d553ff7 291 PANTHER PTHR11122:SF14 6 291 2.5E-135 T 22-04-2016 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 12 171 5.6E-36 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 440 1.4E-74 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 PRINTS PR00084 Mannitol dehydrogenase signature 202 215 1.23E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 PRINTS PR00084 Mannitol dehydrogenase signature 12 22 1.23E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 PRINTS PR00084 Mannitol dehydrogenase signature 232 247 1.23E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 PRINTS PR00084 Mannitol dehydrogenase signature 162 175 1.23E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 SUPERFAMILY SSF51735 3 265 1.22E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 Gene3D G3DSA:1.10.1040.10 268 456 1.6E-49 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 SUPERFAMILY SSF48179 268 455 1.67E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 PANTHER PTHR30562:SF4 12 460 3.6E-239 T 22-04-2016 YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 Gene3D G3DSA:3.40.50.720 4 265 2.2E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12240 bf84e34cd227c3feb77ef4fdae09cf68 463 PANTHER PTHR30562 12 460 3.6E-239 T 22-04-2016 YPTB_RS17895 3d02d848309144938d1d6248bdf546c6 436 SUPERFAMILY SSF111369 87 335 9.55E-56 T 22-04-2016 YPTB_RS17895 3d02d848309144938d1d6248bdf546c6 436 PANTHER PTHR30158 32 436 1.2E-184 T 22-04-2016 YPTB_RS17895 3d02d848309144938d1d6248bdf546c6 436 PANTHER PTHR30158:SF2 32 436 1.2E-184 T 22-04-2016 YPTB_RS17895 3d02d848309144938d1d6248bdf546c6 436 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 91 255 2.9E-8 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS17895 3d02d848309144938d1d6248bdf546c6 436 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 73 411 1.3E-72 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS17895 3d02d848309144938d1d6248bdf546c6 436 Gene3D G3DSA:2.40.50.100 206 238 6.6E-16 T 22-04-2016 YPTB_RS17895 3d02d848309144938d1d6248bdf546c6 436 Gene3D G3DSA:2.40.50.100 98 131 6.6E-16 T 22-04-2016 YPTB_RS11385 e625f6ee82cb455acf8d07767592b838 424 Pfam PF04285 Protein of unknown function (DUF444) 4 420 1.0E-186 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 YPTB_RS11385 e625f6ee82cb455acf8d07767592b838 424 PANTHER PTHR30510 1 424 1.8E-199 T 22-04-2016 YPTB_RS11385 e625f6ee82cb455acf8d07767592b838 424 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.936 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 YPTB_RS20175 725f26cdd0cb673422aeda54fe5a973b 706 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 13 686 4.4E-155 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK YPTB_RS20175 725f26cdd0cb673422aeda54fe5a973b 706 PANTHER PTHR30509:SF4 1 705 0.0 T 22-04-2016 YPTB_RS20175 725f26cdd0cb673422aeda54fe5a973b 706 Pfam PF13515 Fusaric acid resistance protein-like 379 499 1.4E-19 T 22-04-2016 YPTB_RS20175 725f26cdd0cb673422aeda54fe5a973b 706 PANTHER PTHR30509 1 705 0.0 T 22-04-2016 YPTB_RS20175 725f26cdd0cb673422aeda54fe5a973b 706 Pfam PF12805 FUSC-like inner membrane protein yccS 64 332 2.2E-69 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal YPTB_RS09550 0ba10e4106836df4e96c866b4617c37b 182 PANTHER PTHR14269 2 179 3.3E-106 T 22-04-2016 YPTB_RS09550 0ba10e4106836df4e96c866b4617c37b 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 5.9E-60 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPTB_RS09550 0ba10e4106836df4e96c866b4617c37b 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 32.649 T 22-04-2016 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPTB_RS09550 0ba10e4106836df4e96c866b4617c37b 182 PANTHER PTHR14269:SF13 2 179 3.3E-106 T 22-04-2016 YPTB_RS09550 0ba10e4106836df4e96c866b4617c37b 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.4E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YPTB_RS09550 0ba10e4106836df4e96c866b4617c37b 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YPTB_RS09550 0ba10e4106836df4e96c866b4617c37b 182 PIRSF PIRSF000847 1 180 9.9E-44 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPTB_RS18450 814043820431b8a1da61e983a23c12c1 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.0E-40 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS18450 814043820431b8a1da61e983a23c12c1 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.9E-31 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS18450 814043820431b8a1da61e983a23c12c1 119 Gene3D G3DSA:3.30.1130.10 1 115 1.1E-42 T 22-04-2016 YPTB_RS18450 814043820431b8a1da61e983a23c12c1 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 5.4E-28 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS18450 814043820431b8a1da61e983a23c12c1 119 SUPERFAMILY SSF55620 1 115 1.67E-36 T 22-04-2016 YPTB_RS18450 814043820431b8a1da61e983a23c12c1 119 SMART SM00905 4 114 3.5E-47 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPTB_RS18450 814043820431b8a1da61e983a23c12c1 119 PANTHER PTHR20941 1 117 3.4E-38 T 22-04-2016 YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 PANTHER PTHR22604 17 376 8.6E-212 T 22-04-2016 YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 SUPERFAMILY SSF55347 152 312 5.01E-16 T 22-04-2016 YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 PANTHER PTHR22604:SF119 17 376 8.6E-212 T 22-04-2016 YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.40.50.720 18 163 7.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.30.360.10 164 282 7.8E-23 T 22-04-2016 YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.30.360.10 314 368 7.8E-23 T 22-04-2016 YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 SUPERFAMILY SSF51735 17 176 3.94E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19525 fb5ca35d188df8a9d417bf49c4902e14 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 23 145 7.6E-14 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 Pfam PF00072 Response regulator receiver domain 6 120 7.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 PANTHER PTHR26402:SF510 4 214 5.7E-153 T 22-04-2016 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 SUPERFAMILY SSF52172 3 136 2.7E-22 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 SMART SM00421 148 205 2.3E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 Gene3D G3DSA:3.40.50.2300 2 125 7.1E-22 T 22-04-2016 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 PANTHER PTHR26402 4 214 5.7E-153 T 22-04-2016 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 Gene3D G3DSA:1.10.10.10 126 207 4.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 SMART SM00448 4 120 4.3E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 SUPERFAMILY SSF46894 144 206 1.84E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS06950 2459f28e853cc1b5fe290d35a9d9b383 217 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.731 T 22-04-2016 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 YPTB_RS08085 27bf90a2d1ef91beadd516d7fa0f115f 95 SUPERFAMILY SSF53098 1 67 7.4E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS08085 27bf90a2d1ef91beadd516d7fa0f115f 95 Pfam PF13610 DDE domain 1 83 5.8E-29 T 22-04-2016 IPR032874 DDE domain YPTB_RS08085 27bf90a2d1ef91beadd516d7fa0f115f 95 Gene3D G3DSA:3.30.420.10 1 70 7.1E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS16705 6038610d54d72c85545c5b42326f4cd3 495 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 63 408 6.2E-86 T 22-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 YPTB_RS16705 6038610d54d72c85545c5b42326f4cd3 495 PANTHER PTHR35339 25 495 1.5E-183 T 22-04-2016 YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.694 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 Pfam PF00266 Aminotransferase class-V 4 349 9.2E-67 T 22-04-2016 IPR000192 Aminotransferase class V domain YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 Gene3D G3DSA:3.90.1150.10 259 360 6.3E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 5.9E-157 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 SUPERFAMILY SSF53383 1 359 5.09E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 PIRSF PIRSF000525 1 361 3.7E-151 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 PANTHER PTHR21152:SF1 3 361 6.6E-194 T 22-04-2016 YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 PANTHER PTHR21152 3 361 6.6E-194 T 22-04-2016 YPTB_RS07805 77ef5cfa90bf1e8c79331b088197d673 361 Gene3D G3DSA:3.40.640.10 17 258 5.9E-106 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 463 3.5E-18 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 5.4E-19 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 5.4E-19 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 5.4E-19 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 5.4E-19 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.4E-19 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 SUPERFAMILY SSF51905 1 56 4.42E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 SUPERFAMILY SSF51905 114 370 4.42E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 Gene3D G3DSA:3.30.390.30 354 467 1.5E-25 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 5.2E-40 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PANTHER PTHR22912 138 467 0.0 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PANTHER PTHR22912 1 122 0.0 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PIRSF PIRSF000350 2 472 2.4E-57 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 Gene3D G3DSA:3.50.50.60 274 341 4.8E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 Gene3D G3DSA:3.50.50.60 5 151 4.8E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 SUPERFAMILY SSF55424 353 471 1.72E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 331 1.6E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PANTHER PTHR22912:SF176 138 467 0.0 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 PANTHER PTHR22912:SF176 1 122 0.0 T 22-04-2016 YPTB_RS00710 75d49b868418ec9b5da67bc909ade362 487 Gene3D G3DSA:3.50.50.60 160 273 2.7E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PANTHER PTHR32195 1 398 4.8E-223 T 22-04-2016 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PANTHER PTHR32195:SF17 1 398 4.8E-223 T 22-04-2016 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 383 3.3E-136 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 148 168 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 221 240 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 37 56 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 316 334 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 82 102 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 282 301 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 337 356 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 10 33 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 182 204 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS06900 4658a91337d16035c95082e0abcfe62c 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 389 4.4E-134 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YPTB_RS16915 06966a7538f2e8d090c0315e9836961a 120 Pfam PF01381 Helix-turn-helix 65 114 1.2E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS16915 06966a7538f2e8d090c0315e9836961a 120 SUPERFAMILY SSF47413 63 115 1.8E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16915 06966a7538f2e8d090c0315e9836961a 120 Gene3D G3DSA:1.10.260.40 63 117 3.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16915 06966a7538f2e8d090c0315e9836961a 120 SMART SM00530 63 118 6.6E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS18735 6944bc177702c0090360a9d22cb4fe94 562 PIRSF PIRSF029745 11 562 6.7E-159 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPTB_RS18735 6944bc177702c0090360a9d22cb4fe94 562 PANTHER PTHR34597 1 562 1.2E-288 T 22-04-2016 YPTB_RS18735 6944bc177702c0090360a9d22cb4fe94 562 Pfam PF08479 POTRA domain, ShlB-type 77 153 2.1E-23 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB_RS18735 6944bc177702c0090360a9d22cb4fe94 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 169 505 4.8E-22 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPTB_RS18735 6944bc177702c0090360a9d22cb4fe94 562 PANTHER PTHR34597:SF2 1 562 1.2E-288 T 22-04-2016 YPTB_RS18735 6944bc177702c0090360a9d22cb4fe94 562 Gene3D G3DSA:2.40.160.50 184 560 4.6E-122 T 22-04-2016 YPTB_RS18735 6944bc177702c0090360a9d22cb4fe94 562 Gene3D G3DSA:3.10.20.310 73 153 2.9E-22 T 22-04-2016 YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 Gene3D G3DSA:3.40.50.1580 10 233 1.4E-84 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 PANTHER PTHR21234 3 234 4.2E-85 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 SUPERFAMILY SSF53167 3 234 3.27E-94 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 Pfam PF01048 Phosphorylase superfamily 15 219 5.8E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 8.8E-126 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 PANTHER PTHR21234:SF8 3 234 4.2E-85 T 22-04-2016 YPTB_RS03305 f199d897c15ea5d8395d66d6eb8605a6 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.567 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPTB_RS00370 b97ddfc2376116b3f54ed4ceee071fb2 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 6.4E-81 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPTB_RS00370 b97ddfc2376116b3f54ed4ceee071fb2 354 PANTHER PTHR30160 1 353 5.4E-122 T 22-04-2016 YPTB_RS00370 b97ddfc2376116b3f54ed4ceee071fb2 354 SUPERFAMILY SSF53756 1 345 9.94E-101 T 22-04-2016 YPTB_RS00370 b97ddfc2376116b3f54ed4ceee071fb2 354 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 2.8E-162 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YPTB_RS00370 b97ddfc2376116b3f54ed4ceee071fb2 354 PANTHER PTHR30160:SF7 1 353 5.4E-122 T 22-04-2016 YPTB_RS00370 b97ddfc2376116b3f54ed4ceee071fb2 354 Gene3D G3DSA:3.40.50.2000 165 344 4.4E-55 T 22-04-2016 YPTB_RS00370 b97ddfc2376116b3f54ed4ceee071fb2 354 Gene3D G3DSA:3.40.50.2000 1 141 1.4E-56 T 22-04-2016 YPTB_RS16460 c1d1882fe799214596cdfb72a59c4e5e 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.2E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS16460 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732 1 139 5.7E-219 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS16460 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732 157 346 5.7E-219 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS16460 c1d1882fe799214596cdfb72a59c4e5e 346 SUPERFAMILY SSF51430 1 344 6.29E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS16460 c1d1882fe799214596cdfb72a59c4e5e 346 Gene3D G3DSA:3.20.20.100 1 343 7.3E-105 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS16460 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732:SF112 1 139 5.7E-219 T 22-04-2016 YPTB_RS16460 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732:SF112 157 346 5.7E-219 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 Gene3D G3DSA:1.20.58.90 528 604 2.6E-26 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 SMART SM00364 215 234 400.0 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 SMART SM00364 151 170 0.24 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 SMART SM00364 172 191 130.0 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 SMART SM00364 88 107 23.0 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 SMART SM00364 109 129 13.0 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 Gene3D G3DSA:3.80.10.10 69 239 1.8E-30 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 Pfam PF12468 Type III secretion system leucine rich repeat protein 1 59 2.2E-20 T 22-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 316 531 1.5E-71 T 22-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 Gene3D G3DSA:1.20.58.360 390 526 1.9E-52 T 22-04-2016 YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 SUPERFAMILY SSF52058 65 267 5.1E-25 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPTB_RS17865 425a2364a02bf40775bb4885ad6f9764 608 Gene3D G3DSA:1.20.1270.130 309 388 7.0E-28 T 22-04-2016 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 Gene3D G3DSA:3.40.50.1400 4 200 6.6E-67 T 22-04-2016 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 Pfam PF00762 Ferrochelatase 6 318 3.5E-107 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 37.298 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 Gene3D G3DSA:3.40.50.1400 201 318 9.4E-32 T 22-04-2016 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 SUPERFAMILY SSF53800 3 318 1.44E-99 T 22-04-2016 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 PANTHER PTHR11108 1 320 7.5E-139 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPTB_RS05505 0a90f638fda54c7d012b020fc46c6548 320 TIGRFAM TIGR00109 hemH: ferrochelatase 3 318 1.1E-105 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPTB_RS21265 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPTB_RS21265 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS21265 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS21265 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPTB_RS21265 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS17910 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPTB_RS17910 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS17910 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS17910 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPTB_RS17910 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS02660 f8b2654b453bfc8156e546f6a043ecf7 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.14 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02660 f8b2654b453bfc8156e546f6a043ecf7 103 SUPERFAMILY SSF141091 1 102 3.4E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 YPTB_RS02660 f8b2654b453bfc8156e546f6a043ecf7 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.0E-44 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02660 f8b2654b453bfc8156e546f6a043ecf7 103 PANTHER PTHR21349 1 101 5.8E-49 T 22-04-2016 YPTB_RS02660 f8b2654b453bfc8156e546f6a043ecf7 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 YPTB_RS02660 f8b2654b453bfc8156e546f6a043ecf7 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.1E-10 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 Gene3D G3DSA:1.10.540.10 95 234 5.0E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 2.0E-118 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 PANTHER PTHR10909:SF321 49 531 0.0 T 22-04-2016 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 PANTHER PTHR10909 49 531 0.0 T 22-04-2016 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 SUPERFAMILY SSF47203 360 507 5.15E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 SUPERFAMILY SSF56645 119 355 7.72E-46 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 Gene3D G3DSA:2.40.110.10 237 348 3.5E-16 T 22-04-2016 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 4.9E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YPTB_RS04910 b45f91a12471253455f87a63f130949a 815 Gene3D G3DSA:1.20.140.10 349 507 4.3E-22 T 22-04-2016 YPTB_RS08945 a25aa5c45c6d1e1815c5c7bec405e1f3 202 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 202 42.746 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YPTB_RS08945 a25aa5c45c6d1e1815c5c7bec405e1f3 202 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 54 190 3.0E-71 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YPTB_RS08945 a25aa5c45c6d1e1815c5c7bec405e1f3 202 SUPERFAMILY SSF56925 44 202 1.26E-80 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS08945 a25aa5c45c6d1e1815c5c7bec405e1f3 202 Gene3D G3DSA:2.40.160.20 46 202 1.2E-83 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS08945 a25aa5c45c6d1e1815c5c7bec405e1f3 202 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 54 199 3.6E-69 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Gene3D G3DSA:3.40.50.261 281 439 1.4E-12 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 SMART SM00881 9 104 6.9E-22 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Gene3D G3DSA:3.40.630.30 718 878 1.5E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Gene3D G3DSA:3.40.50.261 128 279 2.6E-25 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 SUPERFAMILY SSF52210 287 447 6.8E-38 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 2.2E-45 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 SUPERFAMILY SSF52210 125 286 7.06E-37 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 SUPERFAMILY SSF51735 2 136 1.24E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 SUPERFAMILY SSF55729 613 665 2.23E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 SUPERFAMILY SSF55729 723 866 2.23E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 SUPERFAMILY SSF56059 481 706 5.3E-26 T 22-04-2016 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Pfam PF13549 ATP-grasp domain 472 694 1.7E-73 T 22-04-2016 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 PANTHER PTHR11117 29 699 5.9E-229 T 22-04-2016 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Pfam PF13380 CoA binding domain 13 129 1.5E-20 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 PANTHER PTHR11117:SF8 29 699 5.9E-229 T 22-04-2016 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Pfam PF00583 Acetyltransferase (GNAT) family 790 864 3.2E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS04750 b8fb518794aa711ef3f84407ef4edb4b 880 Gene3D G3DSA:3.40.50.720 1 127 1.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 Gene3D G3DSA:3.90.1310.10 141 241 3.3E-31 T 22-04-2016 YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 PANTHER PTHR30627 7 586 1.4E-255 T 22-04-2016 YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 2.5E-18 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 PANTHER PTHR30627:SF1 7 586 1.4E-255 T 22-04-2016 YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 Gene3D G3DSA:3.40.710.10 242 559 3.5E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 SUPERFAMILY SSF56601 234 562 1.18E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 1.2E-79 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPTB_RS03825 646ca88d4c469fd95c79ece0e8cab0f0 587 SUPERFAMILY SSF56519 62 233 4.97E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 76 105 2400.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 43 72 600.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 143 172 0.6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 110 139 460.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 PANTHER PTHR24198:SF36 31 202 1.5E-18 T 22-04-2016 YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 PANTHER PTHR24198 31 202 1.5E-18 T 22-04-2016 YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 Gene3D G3DSA:1.25.40.20 15 180 9.4E-25 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain YPTB_RS15675 4665f03771e5ccc420aeb8a3ed513cc9 218 SUPERFAMILY SSF48403 15 188 1.29E-30 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 50.763 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 Pfam PF02254 TrkA-N domain 403 513 1.8E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 1.6E-88 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 SUPERFAMILY SSF51735 402 529 3.36E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 Gene3D G3DSA:3.40.50.720 397 531 6.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 PANTHER PTHR16254:SF6 1 557 2.2E-268 T 22-04-2016 YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 PANTHER PTHR16254 1 557 2.2E-268 T 22-04-2016 YPTB_RS20095 c048cf293135021ed37c6271bb938952 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 1.7E-67 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 PIRSF PIRSF000193 3 271 2.6E-75 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 PANTHER PTHR11645 1 271 4.0E-107 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 PANTHER PTHR11645:SF0 1 271 4.0E-107 T 22-04-2016 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 SUPERFAMILY SSF51735 4 162 3.11E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 Gene3D G3DSA:3.40.50.720 2 161 4.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 SUPERFAMILY SSF48179 163 271 3.74E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 2.5E-29 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.618 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 5.0E-18 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 Gene3D G3DSA:1.10.3730.10 164 269 1.2E-28 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPTB_RS17410 12f2df77347126fc7970bcde0433fd7c 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 2.6E-69 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPTB_RS17445 137c642fde6d6cd5a8c96da3d239c2a4 308 PANTHER PTHR12544 7 308 1.8E-171 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS17445 137c642fde6d6cd5a8c96da3d239c2a4 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.144 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS17445 137c642fde6d6cd5a8c96da3d239c2a4 308 SUPERFAMILY SSF56601 8 308 2.89E-116 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS17445 137c642fde6d6cd5a8c96da3d239c2a4 308 Pfam PF04960 Glutaminase 24 308 1.5E-115 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS17445 137c642fde6d6cd5a8c96da3d239c2a4 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 9.1E-134 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPTB_RS17445 137c642fde6d6cd5a8c96da3d239c2a4 308 Gene3D G3DSA:3.40.710.10 8 308 1.3E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 4.7E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 PANTHER PTHR18966:SF191 24 251 2.6E-37 T 22-04-2016 YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 Gene3D G3DSA:3.40.190.10 17 140 9.5E-37 T 22-04-2016 YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 PANTHER PTHR18966 24 251 2.6E-37 T 22-04-2016 YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 SMART SM00062 35 255 2.2E-41 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 Gene3D G3DSA:3.40.190.10 141 204 3.7E-12 T 22-04-2016 YPTB_RS04825 f46f10fc48ef1eb4e60f2036f6f4c23f 262 SUPERFAMILY SSF53850 5 254 1.38E-53 T 22-04-2016 YPTB_RS18920 4d1ce3da71c4d575038b9568d6773d5b 196 PANTHER PTHR30390 1 196 3.0E-133 T 22-04-2016 YPTB_RS18920 4d1ce3da71c4d575038b9568d6773d5b 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 59.568 T 22-04-2016 IPR023070 DnaA initiator-associating protein YPTB_RS18920 4d1ce3da71c4d575038b9568d6773d5b 196 PANTHER PTHR30390:SF5 1 196 3.0E-133 T 22-04-2016 YPTB_RS18920 4d1ce3da71c4d575038b9568d6773d5b 196 Pfam PF13580 SIS domain 9 144 3.8E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS18920 4d1ce3da71c4d575038b9568d6773d5b 196 SUPERFAMILY SSF53697 3 191 4.45E-51 T 22-04-2016 YPTB_RS18920 4d1ce3da71c4d575038b9568d6773d5b 196 Gene3D G3DSA:3.40.50.10490 3 191 1.3E-54 T 22-04-2016 YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1089 1227 6.0E-10 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 SUPERFAMILY SSF48239 1497 1754 1.53E-15 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 PANTHER PTHR40094 32 1989 0.0 T 22-04-2016 YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 SMART SM01360 1294 1386 2.6E-22 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 611 714 7.9E-24 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 Pfam PF00207 Alpha-2-macroglobulin family 1295 1373 4.5E-11 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 Pfam PF01835 MG2 domain 725 822 1.3E-15 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 SMART SM01359 1089 1228 8.2E-33 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YPTB_RS05895 1f4eb33f74aedf834f55946539a0c018 1989 PANTHER PTHR40094:SF1 32 1989 0.0 T 22-04-2016 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:3.40.50.150 232 429 2.0E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:1.10.940.10 3 147 2.8E-45 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 SUPERFAMILY SSF48013 6 149 4.91E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 PANTHER PTHR22807 33 429 1.1E-145 T 22-04-2016 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 SUPERFAMILY SSF53335 142 429 8.29E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 70.041 T 22-04-2016 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 9.1E-77 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 PANTHER PTHR22807:SF30 33 429 1.1E-145 T 22-04-2016 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:3.30.70.1170 173 230 2.1E-26 T 22-04-2016 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 Pfam PF01029 NusB family 7 127 8.1E-25 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 2.9E-174 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS19860 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:1.10.287.730 148 172 1.5E-14 T 22-04-2016 YPTB_RS11065 96b23594ee7d6e1c5831c43a97c7c57f 276 PANTHER PTHR23344:SF20 17 276 2.1E-74 T 22-04-2016 YPTB_RS11065 96b23594ee7d6e1c5831c43a97c7c57f 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 200 1.2E-23 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPTB_RS11065 96b23594ee7d6e1c5831c43a97c7c57f 276 SUPERFAMILY SSF51695 15 266 1.05E-49 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS11065 96b23594ee7d6e1c5831c43a97c7c57f 276 PANTHER PTHR23344 17 276 2.1E-74 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPTB_RS11065 96b23594ee7d6e1c5831c43a97c7c57f 276 Gene3D G3DSA:3.20.20.190 10 270 1.7E-46 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 SUPERFAMILY SSF53850 99 295 6.52E-26 T 22-04-2016 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Pfam PF03466 LysR substrate binding domain 97 295 1.7E-26 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Gene3D G3DSA:3.40.190.10 98 186 5.0E-14 T 22-04-2016 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Gene3D G3DSA:3.40.190.10 187 272 2.5E-16 T 22-04-2016 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PANTHER PTHR30346 9 297 1.1E-156 T 22-04-2016 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PANTHER PTHR30346:SF4 9 297 1.1E-156 T 22-04-2016 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 SUPERFAMILY SSF46785 9 90 9.98E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Gene3D G3DSA:1.10.10.10 11 92 4.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06645 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 4.6E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 8.6E-13 T 22-04-2016 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 131 1.4E-10 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 Gene3D G3DSA:1.10.10.10 1 51 1.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 SUPERFAMILY SSF46785 1 61 5.96E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 Gene3D G3DSA:3.30.70.920 54 123 5.0E-13 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 SMART SM00344 1 107 2.1E-25 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 PANTHER PTHR30154:SF14 1 149 7.7E-110 T 22-04-2016 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 PANTHER PTHR30154 1 149 7.7E-110 T 22-04-2016 YPTB_RS13155 8be59577c7436779124a35e753f33fa4 149 SUPERFAMILY SSF54909 62 136 8.4E-14 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 534 2.7E-156 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 Pfam PF00005 ABC transporter 356 503 6.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 SUPERFAMILY SSF90123 7 327 1.29E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 Gene3D G3DSA:3.40.50.300 338 569 9.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 Gene3D G3DSA:1.20.1560.10 7 322 1.3E-29 T 22-04-2016 YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 PANTHER PTHR24222:SF30 4 574 2.5E-275 T 22-04-2016 YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 SUPERFAMILY SSF52540 335 572 1.96E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 PANTHER PTHR24222 4 574 2.5E-275 T 22-04-2016 YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 SMART SM00382 365 550 4.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 Pfam PF00664 ABC transporter transmembrane region 63 287 4.3E-9 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS07715 c617b7a916cd54420a615b6801979b18 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS01970 56e327385b41c2a8229945c3511d5f4c 428 PANTHER PTHR35334:SF5 1 428 0.0 T 22-04-2016 YPTB_RS01970 56e327385b41c2a8229945c3511d5f4c 428 PANTHER PTHR35334 1 428 0.0 T 22-04-2016 YPTB_RS00480 8aaecee52a4cafea0f515380b2e5825f 219 Pfam PF13531 Bacterial extracellular solute-binding protein 3 216 3.3E-31 T 22-04-2016 YPTB_RS00480 8aaecee52a4cafea0f515380b2e5825f 219 Gene3D G3DSA:3.40.190.10 114 174 1.3E-4 T 22-04-2016 YPTB_RS00480 8aaecee52a4cafea0f515380b2e5825f 219 SUPERFAMILY SSF53850 4 218 4.3E-38 T 22-04-2016 YPTB_RS00480 8aaecee52a4cafea0f515380b2e5825f 219 PANTHER PTHR30632 1 219 1.9E-129 T 22-04-2016 YPTB_RS00480 8aaecee52a4cafea0f515380b2e5825f 219 PANTHER PTHR30632:SF5 1 219 1.9E-129 T 22-04-2016 YPTB_RS00480 8aaecee52a4cafea0f515380b2e5825f 219 Gene3D G3DSA:3.40.190.10 4 113 4.7E-10 T 22-04-2016 YPTB_RS19120 397e9cde53988775b301a8dfac884521 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site YPTB_RS19120 397e9cde53988775b301a8dfac884521 128 SUPERFAMILY SSF55298 4 127 2.2E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS19120 397e9cde53988775b301a8dfac884521 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 2.5E-43 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS19120 397e9cde53988775b301a8dfac884521 128 PANTHER PTHR11803 1 127 2.5E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS19120 397e9cde53988775b301a8dfac884521 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.3E-52 T 22-04-2016 IPR006056 RidA family YPTB_RS19120 397e9cde53988775b301a8dfac884521 128 Gene3D G3DSA:3.30.1330.40 3 126 1.3E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 PANTHER PTHR18964:SF2 1 372 3.6E-217 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 Gene3D G3DSA:3.40.50.2000 2 209 4.0E-89 T 22-04-2016 YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 SUPERFAMILY SSF53756 2 372 8.17E-142 T 22-04-2016 YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 1.5E-126 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 69.286 T 22-04-2016 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|UniPathway: UPA00566 YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 PANTHER PTHR18964 1 372 3.6E-217 T 22-04-2016 YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 5.5E-169 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 YPTB_RS01030 df9b355abae7e4496591115ce08afdfc 376 Gene3D G3DSA:3.40.50.2000 210 371 2.4E-66 T 22-04-2016 YPTB_RS07250 801372c40aedc0625d4c23b0b6f9ea94 194 SUPERFAMILY SSF54001 70 189 1.24E-39 T 22-04-2016 YPTB_RS07250 801372c40aedc0625d4c23b0b6f9ea94 194 Pfam PF00877 NlpC/P60 family 82 185 1.6E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS07250 801372c40aedc0625d4c23b0b6f9ea94 194 Gene3D G3DSA:3.90.1720.10 70 189 3.8E-43 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS07250 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666:SF210 7 37 4.7E-100 T 22-04-2016 YPTB_RS07250 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666:SF210 73 189 4.7E-100 T 22-04-2016 YPTB_RS07250 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666 7 37 4.7E-100 T 22-04-2016 YPTB_RS07250 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666 73 189 4.7E-100 T 22-04-2016 YPTB_RS16760 10991cb2299d93454a516d4d71ccb570 400 Gene3D G3DSA:3.20.20.80 27 399 1.9E-147 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS16760 10991cb2299d93454a516d4d71ccb570 400 Pfam PF07745 Glycosyl hydrolase family 53 40 399 9.1E-123 T 22-04-2016 IPR011683 Glycosyl hydrolase family 53 GO:0015926 YPTB_RS16760 10991cb2299d93454a516d4d71ccb570 400 PANTHER PTHR34983:SF1 1 400 2.8E-219 T 22-04-2016 YPTB_RS16760 10991cb2299d93454a516d4d71ccb570 400 SUPERFAMILY SSF51445 14 399 4.15E-98 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS16760 10991cb2299d93454a516d4d71ccb570 400 PANTHER PTHR34983 1 400 2.8E-219 T 22-04-2016 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.2E-94 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 PANTHER PTHR30073 1 330 1.4E-202 T 22-04-2016 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 SUPERFAMILY SSF55681 5 328 7.46E-99 T 22-04-2016 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 PIRSF PIRSF001555 1 329 3.4E-156 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Gene3D G3DSA:3.30.930.10 2 326 1.4E-153 T 22-04-2016 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.4E-184 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.724 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPTB_RS00085 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 PANTHER PTHR30073:SF5 1 330 1.4E-202 T 22-04-2016 YPTB_RS05475 75376e9118b70db733c1f196ce0b18a1 187 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 183 1.7E-73 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 YPTB_RS05475 75376e9118b70db733c1f196ce0b18a1 187 Pfam PF00156 Phosphoribosyl transferase domain 35 164 2.0E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPTB_RS05475 75376e9118b70db733c1f196ce0b18a1 187 SUPERFAMILY SSF53271 17 184 1.56E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS05475 75376e9118b70db733c1f196ce0b18a1 187 PANTHER PTHR32315 1 187 1.6E-89 T 22-04-2016 YPTB_RS05475 75376e9118b70db733c1f196ce0b18a1 187 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 184 38.792 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 YPTB_RS05475 75376e9118b70db733c1f196ce0b18a1 187 Gene3D G3DSA:3.40.50.2020 11 185 1.8E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS04970 487747c28c41144227289dc1909e58ff 315 PANTHER PTHR23344 19 310 8.3E-141 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPTB_RS04970 487747c28c41144227289dc1909e58ff 315 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 190 1.2E-16 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPTB_RS04970 487747c28c41144227289dc1909e58ff 315 Gene3D G3DSA:3.20.20.190 6 310 9.3E-48 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS04970 487747c28c41144227289dc1909e58ff 315 SUPERFAMILY SSF51695 25 307 1.83E-44 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS04970 487747c28c41144227289dc1909e58ff 315 PANTHER PTHR23344:SF2 19 310 8.3E-141 T 22-04-2016 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 4.9E-54 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PANTHER PTHR11405 1 276 2.9E-246 T 22-04-2016 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PANTHER PTHR11405 297 335 2.9E-246 T 22-04-2016 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 Gene3D G3DSA:3.40.50.1370 144 319 8.6E-73 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.4E-46 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 83.52 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PANTHER PTHR11405:SF42 1 276 2.9E-246 T 22-04-2016 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PANTHER PTHR11405:SF42 297 335 2.9E-246 T 22-04-2016 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 SUPERFAMILY SSF53671 1 333 6.42E-100 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 1.2E-134 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS02990 efbea64e884c8a28cd72a598c23d9389 335 Gene3D G3DSA:3.40.50.1370 3 143 1.2E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 1.6E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 PANTHER PTHR23135:SF5 14 469 3.7E-235 T 22-04-2016 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 SUPERFAMILY SSF53244 323 477 2.38E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Gene3D G3DSA:3.40.1190.10 108 325 4.8E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 PANTHER PTHR23135 14 469 3.7E-235 T 22-04-2016 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 SUPERFAMILY SSF53623 105 322 1.57E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 SUPERFAMILY SSF51984 20 106 8.89E-29 T 22-04-2016 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Gene3D G3DSA:3.40.50.720 20 107 2.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.595 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Gene3D G3DSA:3.90.190.20 326 477 5.6E-56 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Pfam PF01225 Mur ligase family, catalytic domain 21 119 7.6E-30 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 2.0E-182 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03860 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Pfam PF08245 Mur ligase middle domain 124 304 3.2E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 Gene3D G3DSA:3.40.50.7700 9 172 1.5E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 PANTHER PTHR23046:SF2 14 173 6.4E-90 T 22-04-2016 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 SMART SM01001 13 164 3.4E-100 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 169 9.8E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 PANTHER PTHR23046 14 173 6.4E-90 T 22-04-2016 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 Pfam PF00731 AIR carboxylase 14 162 4.9E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 32.224 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 PIRSF PIRSF001338 10 173 4.1E-66 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 YPTB_RS05690 c9db1f3a1a2359430423b0a20b0a6367 174 SUPERFAMILY SSF52255 14 172 6.02E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPTB_RS15085 dfe0ef2b55ef8fc8912132150073edfb 156 Gene3D G3DSA:3.40.30.10 3 154 2.4E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15085 dfe0ef2b55ef8fc8912132150073edfb 156 Pfam PF00578 AhpC/TSA family 7 134 1.2E-39 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YPTB_RS15085 dfe0ef2b55ef8fc8912132150073edfb 156 PIRSF PIRSF000239 1 145 2.8E-17 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 YPTB_RS15085 dfe0ef2b55ef8fc8912132150073edfb 156 SUPERFAMILY SSF52833 3 154 1.65E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15085 dfe0ef2b55ef8fc8912132150073edfb 156 PANTHER PTHR10681 1 138 2.0E-51 T 22-04-2016 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:1.25.40.10 450 811 2.2E-97 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 2.0E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402 78 100 2.7E-20 T 22-04-2016 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402 813 900 2.7E-20 T 22-04-2016 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:3.40.50.300 31 162 2.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.609 T 22-04-2016 IPR023768 Transcriptional regulator HTH-type, MalT YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF52540 7 225 9.69E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF48452 442 806 8.94E-158 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402:SF567 78 100 2.7E-20 T 22-04-2016 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402:SF567 813 900 2.7E-20 T 22-04-2016 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:1.10.10.10 837 895 6.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 SMART SM00421 836 893 6.4E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS20415 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF46894 829 895 1.29E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 PANTHER PTHR21581 1 400 3.5E-230 T 22-04-2016 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 PANTHER PTHR21581:SF4 1 400 3.5E-230 T 22-04-2016 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 SUPERFAMILY SSF69189 289 382 2.94E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 289 380 1.0E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 SUPERFAMILY SSF56601 10 289 1.13E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 269 1.9E-99 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 Gene3D G3DSA:3.40.710.10 35 287 1.6E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 Gene3D G3DSA:2.60.410.10 289 380 6.3E-32 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS06030 d332f0f780332436d81ff8d25b5969ae 400 SMART SM00936 289 380 6.0E-34 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 Gene3D G3DSA:3.55.50.10 112 205 6.6E-30 T 22-04-2016 YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 5.1E-186 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 PANTHER PTHR32305 31 826 0.0 T 22-04-2016 YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 Gene3D G3DSA:2.40.50.230 390 470 8.6E-25 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 751 3.5E-51 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 4.3E-35 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 SUPERFAMILY SSF69279 204 383 1.65E-50 T 22-04-2016 YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 PANTHER PTHR32305:SF7 31 826 0.0 T 22-04-2016 YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 SUPERFAMILY SSF69255 382 471 4.97E-25 T 22-04-2016 YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 Gene3D G3DSA:4.10.180.10 297 312 3.3E-7 T 22-04-2016 IPR027440 Capsid protein alpha-like domain YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 Pfam PF05954 Phage late control gene D protein (GPD) 34 355 1.7E-64 T 22-04-2016 YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 515 5.7E-74 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS08210 67f4ae23fce7e94db4f996af53758cda 832 SUPERFAMILY SSF69279 22 203 6.8E-49 T 22-04-2016 YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 1.7E-120 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 Gene3D G3DSA:3.90.1670.10 27 308 2.5E-102 T 22-04-2016 IPR024064 FdhE-like YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 PANTHER PTHR37689 6 309 6.9E-116 T 22-04-2016 YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 SUPERFAMILY SSF144020 26 308 2.62E-95 T 22-04-2016 IPR024064 FdhE-like YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 50.121 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 3.1E-114 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 PANTHER PTHR37689:SF1 6 309 6.9E-116 T 22-04-2016 YPTB_RS21220 1bcabcfceff15781d554e34b16605c43 309 PIRSF PIRSF018296 1 309 1.1E-135 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPTB_RS07460 cf3314fe03049e377b91a88291525301 223 PANTHER PTHR30450:SF1 1 223 2.9E-123 T 22-04-2016 YPTB_RS07460 cf3314fe03049e377b91a88291525301 223 PANTHER PTHR30450 1 223 2.9E-123 T 22-04-2016 YPTB_RS07460 cf3314fe03049e377b91a88291525301 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 215 1.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07460 cf3314fe03049e377b91a88291525301 223 Gene3D G3DSA:1.10.3720.10 17 219 3.2E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07460 cf3314fe03049e377b91a88291525301 223 SUPERFAMILY SSF161098 16 205 6.67E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 SUPERFAMILY SSF51395 11 319 6.04E-88 T 22-04-2016 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 Gene3D G3DSA:1.10.1200.80 253 320 2.1E-16 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 Gene3D G3DSA:3.20.20.70 8 244 2.4E-81 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 PANTHER PTHR11082:SF25 1 318 5.0E-150 T 22-04-2016 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 PANTHER PTHR11082 1 318 5.0E-150 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 3.7E-114 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 PIRSF PIRSF006621 1 321 5.1E-99 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.789 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 YPTB_RS19335 9b2817c09b05e6dcf24a42ce782f84b7 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 3.4E-134 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Pfam PF13437 HlyD family secretion protein 307 410 3.3E-16 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PANTHER PTHR30386 167 456 3.2E-92 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PANTHER PTHR30386 13 136 3.2E-92 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PANTHER PTHR30386:SF8 167 456 3.2E-92 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PANTHER PTHR30386:SF8 13 136 3.2E-92 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 435 8.1E-60 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 93 113 8.1E-60 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 377 400 8.1E-60 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 51 74 8.1E-60 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 435 455 8.1E-60 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 320 341 8.1E-60 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 377 8.1E-60 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Gene3D G3DSA:2.40.50.100 305 340 1.7E-17 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Gene3D G3DSA:2.40.50.100 85 115 1.7E-17 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 SUPERFAMILY SSF111369 84 150 9.68E-6 T 22-04-2016 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 ProSitePatterns PS00543 HlyD family secretion proteins signature. 420 442 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 42 456 2.3E-112 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 YPTB_RS11850 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Pfam PF13533 Biotin-lipoyl like 85 130 2.3E-8 T 22-04-2016 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 SUPERFAMILY SSF51569 1 316 1.36E-115 T 22-04-2016 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 Pfam PF00923 Transaldolase 14 313 1.7E-101 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 PANTHER PTHR10683:SF18 1 317 9.6E-178 T 22-04-2016 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 PANTHER PTHR10683 1 317 9.6E-178 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.75 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 2.1E-162 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS03415 3c71a0f9d113ed8c96a25f2fc02af62f 317 Gene3D G3DSA:3.20.20.70 3 315 8.1E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS13600 70e1c48b1e8e677b6667d3eab2c8fdb3 167 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 5 162 2.3E-55 T 22-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 YPTB_RS13600 70e1c48b1e8e677b6667d3eab2c8fdb3 167 Gene3D G3DSA:3.30.230.60 2 164 4.4E-55 T 22-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 YPTB_RS13600 70e1c48b1e8e677b6667d3eab2c8fdb3 167 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 3 156 1.8E-42 T 22-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 YPTB_RS13600 70e1c48b1e8e677b6667d3eab2c8fdb3 167 SUPERFAMILY SSF54211 1 164 1.59E-56 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS19240 ff814fca5c58bdbecc3e2154327a2645 952 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 221 249 2.0E-4 T 22-04-2016 IPR006530 YD repeat YPTB_RS19240 ff814fca5c58bdbecc3e2154327a2645 952 PANTHER PTHR11219:SF45 16 685 0.0 T 22-04-2016 YPTB_RS19240 ff814fca5c58bdbecc3e2154327a2645 952 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 669 8.6E-27 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPTB_RS19240 ff814fca5c58bdbecc3e2154327a2645 952 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 859 869 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 YPTB_RS19240 ff814fca5c58bdbecc3e2154327a2645 952 PANTHER PTHR11219 16 685 0.0 T 22-04-2016 YPTB_RS19240 ff814fca5c58bdbecc3e2154327a2645 952 Gene3D G3DSA:3.90.190.10 798 947 8.7E-18 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPTB_RS19240 ff814fca5c58bdbecc3e2154327a2645 952 SUPERFAMILY SSF52799 822 941 7.35E-6 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPTB_RS05050 e981e80ea039d3a8cfd9cbf1c542683a 185 Pfam PF00398 Ribosomal RNA adenine dimethylase 34 152 1.5E-5 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPTB_RS05050 e981e80ea039d3a8cfd9cbf1c542683a 185 SUPERFAMILY SSF53335 14 167 6.69E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS05050 e981e80ea039d3a8cfd9cbf1c542683a 185 Gene3D G3DSA:3.40.50.150 30 170 8.8E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 PANTHER PTHR30514:SF3 5 271 1.1E-101 T 22-04-2016 YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 Gene3D G3DSA:1.10.10.10 8 84 7.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 Gene3D G3DSA:3.40.50.10490 115 271 2.9E-23 T 22-04-2016 YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 PANTHER PTHR30514 5 271 1.1E-101 T 22-04-2016 YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 74 6.0E-10 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 Pfam PF01380 SIS domain 140 266 1.7E-21 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 SUPERFAMILY SSF46689 9 85 4.84E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS05900 6e89179a8c5de26cfeed02f74f31a2aa 284 SUPERFAMILY SSF53697 109 277 1.36E-26 T 22-04-2016 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 1.6E-30 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 2.6E-40 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 PIRSF PIRSF000538 2 542 8.1E-77 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 537 2.5E-209 T 22-04-2016 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 SUPERFAMILY SSF53067 4 263 2.95E-60 T 22-04-2016 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 Gene3D G3DSA:3.30.420.40 2 262 6.3E-71 T 22-04-2016 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 Gene3D G3DSA:3.30.420.40 279 537 2.8E-62 T 22-04-2016 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 PANTHER PTHR10196:SF59 1 545 3.9E-261 T 22-04-2016 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 PANTHER PTHR10196 1 545 3.9E-261 T 22-04-2016 YPTB_RS19430 b5532775c0068183802ff244d35ff0b1 545 SUPERFAMILY SSF53067 280 532 4.53E-56 T 22-04-2016 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 PANTHER PTHR11615:SF149 30 195 1.9E-115 T 22-04-2016 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 Gene3D G3DSA:2.20.25.90 37 108 9.6E-25 T 22-04-2016 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 SMART SM00926 43 104 4.1E-22 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 Gene3D G3DSA:3.40.50.740 109 173 2.6E-16 T 22-04-2016 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 SUPERFAMILY SSF53706 36 195 8.9E-58 T 22-04-2016 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 Pfam PF00384 Molybdopterin oxidoreductase 107 145 1.9E-6 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 1.6E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS21200 a6a9d030044b5bb8b9a8d19990b45e86 195 PANTHER PTHR11615 30 195 1.9E-115 T 22-04-2016 YPTB_RS06640 a593084e5434730144bbc85e4e1ccbc6 682 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 503 4.8E-175 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPTB_RS06640 a593084e5434730144bbc85e4e1ccbc6 682 PANTHER PTHR30047 1 678 0.0 T 22-04-2016 YPTB_RS06640 a593084e5434730144bbc85e4e1ccbc6 682 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 1.3E-175 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPTB_RS06640 a593084e5434730144bbc85e4e1ccbc6 682 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS06640 a593084e5434730144bbc85e4e1ccbc6 682 PANTHER PTHR30047:SF6 1 678 0.0 T 22-04-2016 YPTB_RS11135 de5e08bd1f556a750728acf8a57a14a2 191 PANTHER PTHR37519:SF1 2 190 2.6E-119 T 22-04-2016 YPTB_RS11135 de5e08bd1f556a750728acf8a57a14a2 191 PANTHER PTHR37519 2 190 2.6E-119 T 22-04-2016 YPTB_RS11135 de5e08bd1f556a750728acf8a57a14a2 191 Gene3D G3DSA:3.10.180.10 4 180 4.2E-72 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB_RS11135 de5e08bd1f556a750728acf8a57a14a2 191 Pfam PF06185 YecM protein 10 180 1.0E-69 T 22-04-2016 IPR010393 Protein of unknown function DUF991 YPTB_RS11135 de5e08bd1f556a750728acf8a57a14a2 191 SUPERFAMILY SSF54593 4 180 2.02E-69 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB_RS21135 b9718535deba681b9ec73c180b068ccd 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 2.7E-83 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 YPTB_RS21135 b9718535deba681b9ec73c180b068ccd 190 SUPERFAMILY SSF48150 4 186 9.42E-81 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS21135 b9718535deba681b9ec73c180b068ccd 190 PANTHER PTHR30037:SF4 3 186 2.5E-117 T 22-04-2016 YPTB_RS21135 b9718535deba681b9ec73c180b068ccd 190 Gene3D G3DSA:1.10.340.30 4 184 1.2E-84 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS21135 b9718535deba681b9ec73c180b068ccd 190 Pfam PF03352 Methyladenine glycosylase 8 184 1.3E-78 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 YPTB_RS21135 b9718535deba681b9ec73c180b068ccd 190 PANTHER PTHR30037 3 186 2.5E-117 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146:SF3 210 346 2.1E-195 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146:SF3 6 193 2.1E-195 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SMART SM00354 7 78 7.1E-8 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SUPERFAMILY SSF53822 67 327 4.71E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:3.40.50.2300 179 327 4.4E-33 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146 210 346 2.1E-195 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146 6 193 2.1E-195 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 52 5.8E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SUPERFAMILY SSF47413 6 58 1.03E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Pfam PF13377 Periplasmic binding protein-like domain 175 328 1.4E-21 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:3.40.50.2300 65 178 2.8E-20 T 22-04-2016 YPTB_RS13680 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:1.10.260.40 6 64 1.7E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS12475 48aa84b174004720756f6e790136a17b 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 2.7E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 YPTB_RS12475 48aa84b174004720756f6e790136a17b 79 PANTHER PTHR35175:SF1 1 79 5.5E-51 T 22-04-2016 YPTB_RS12475 48aa84b174004720756f6e790136a17b 79 PANTHER PTHR35175 1 79 5.5E-51 T 22-04-2016 YPTB_RS19530 1b36f089fd512cd2b0db4879954e2bf6 299 SUPERFAMILY SSF51658 8 289 8.15E-37 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS19530 1b36f089fd512cd2b0db4879954e2bf6 299 Gene3D G3DSA:3.20.20.150 3 294 3.9E-42 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS19530 1b36f089fd512cd2b0db4879954e2bf6 299 Pfam PF01261 Xylose isomerase-like TIM barrel 20 228 2.2E-27 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS19530 1b36f089fd512cd2b0db4879954e2bf6 299 PANTHER PTHR12110 1 294 1.2E-23 T 22-04-2016 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 PANTHER PTHR21198:SF2 19 287 4.9E-117 T 22-04-2016 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 SUPERFAMILY SSF53681 29 129 3.86E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 Gene3D G3DSA:3.40.50.1860 29 195 5.3E-48 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 SUPERFAMILY SSF53681 131 283 4.14E-32 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 31 239 7.8E-25 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 33.951 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 29 274 3.2E-84 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS00755 ff27251025697a3c4a195fa3b1a635c6 287 PANTHER PTHR21198 19 287 4.9E-117 T 22-04-2016 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 SUPERFAMILY SSF103473 336 500 8.24E-11 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 503 3.9E-108 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 PANTHER PTHR11654 11 233 4.0E-127 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 PANTHER PTHR11654 281 505 4.0E-127 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 SUPERFAMILY SSF103473 16 312 1.7E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 Pfam PF00854 POT family 91 465 2.2E-65 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 Gene3D G3DSA:1.20.1250.20 24 203 4.4E-17 T 22-04-2016 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 PANTHER PTHR11654:SF119 11 233 4.0E-127 T 22-04-2016 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 PANTHER PTHR11654:SF119 281 505 4.0E-127 T 22-04-2016 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 Gene3D G3DSA:1.20.1250.20 342 508 1.0E-5 T 22-04-2016 YPTB_RS13540 2ece47da496e965758d287474b26ddad 512 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS13975 21febf70dbd4d0178cb024a55c80ac63 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 477 1.2E-132 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YPTB_RS13975 21febf70dbd4d0178cb024a55c80ac63 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 477 17.725 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YPTB_RS13975 21febf70dbd4d0178cb024a55c80ac63 487 PANTHER PTHR22773 1 487 1.3E-201 T 22-04-2016 YPTB_RS13975 21febf70dbd4d0178cb024a55c80ac63 487 PANTHER PTHR22773:SF41 1 487 1.3E-201 T 22-04-2016 YPTB_RS13975 21febf70dbd4d0178cb024a55c80ac63 487 Pfam PF00361 Proton-conducting membrane transporter 122 422 9.2E-81 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YPTB_RS02205 166bd993915174e0fd6019331fec8c53 104 SUPERFAMILY SSF54909 1 103 2.1E-37 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS02205 166bd993915174e0fd6019331fec8c53 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 104 1.6E-56 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 YPTB_RS02205 166bd993915174e0fd6019331fec8c53 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 31.791 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 YPTB_RS02205 166bd993915174e0fd6019331fec8c53 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 2.4E-28 T 22-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 YPTB_RS02205 166bd993915174e0fd6019331fec8c53 104 PANTHER PTHR34389:SF2 1 104 8.9E-60 T 22-04-2016 YPTB_RS02205 166bd993915174e0fd6019331fec8c53 104 PANTHER PTHR34389 1 104 8.9E-60 T 22-04-2016 YPTB_RS18915 340e6b3e0cad4db6a2d59eece76c899f 117 Gene3D G3DSA:3.40.1350.10 10 116 8.2E-36 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 YPTB_RS18915 340e6b3e0cad4db6a2d59eece76c899f 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 1.0E-38 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YPTB_RS18915 340e6b3e0cad4db6a2d59eece76c899f 117 PANTHER PTHR34039 1 117 3.8E-43 T 22-04-2016 YPTB_RS18915 340e6b3e0cad4db6a2d59eece76c899f 117 PANTHER PTHR34039:SF1 1 117 3.8E-43 T 22-04-2016 YPTB_RS18915 340e6b3e0cad4db6a2d59eece76c899f 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 115 23.456 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YPTB_RS18915 340e6b3e0cad4db6a2d59eece76c899f 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 102 1.0E-23 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YPTB_RS18915 340e6b3e0cad4db6a2d59eece76c899f 117 SUPERFAMILY SSF52980 4 112 5.79E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 709 726 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 PANTHER PTHR32552 17 726 0.0 T 22-04-2016 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 Gene3D G3DSA:2.170.130.10 23 143 1.4E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 Pfam PF00593 TonB dependent receptor 479 722 3.3E-17 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 SUPERFAMILY SSF56935 25 430 5.49E-92 T 22-04-2016 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 SUPERFAMILY SSF56935 461 724 5.49E-92 T 22-04-2016 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 40 726 1.1E-128 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 PANTHER PTHR32552:SF30 17 726 0.0 T 22-04-2016 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 140 9.7E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS17685 3bf78a6aa3b46006fc12a502023d4151 726 Gene3D G3DSA:2.40.170.20 144 726 6.5E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS15650 3657c881c3d566865634af056ee069ac 218 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 188 2.2E-22 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal YPTB_RS15650 3657c881c3d566865634af056ee069ac 218 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 86 6.6E-35 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 YPTB_RS15650 3657c881c3d566865634af056ee069ac 218 PIRSF PIRSF016938 1 206 2.3E-31 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 YPTB_RS15650 3657c881c3d566865634af056ee069ac 218 SUPERFAMILY SSF89069 1 66 7.19E-20 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 YPTB_RS15650 3657c881c3d566865634af056ee069ac 218 PANTHER PTHR38104 1 218 4.0E-84 T 22-04-2016 YPTB_RS05210 9f85ea1aba9f6537569324de4ee61718 161 PANTHER PTHR36305 1 161 1.5E-78 T 22-04-2016 YPTB_RS05210 9f85ea1aba9f6537569324de4ee61718 161 SUPERFAMILY SSF101307 8 157 1.14E-50 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YPTB_RS05210 9f85ea1aba9f6537569324de4ee61718 161 Gene3D G3DSA:1.10.3760.10 73 151 4.2E-4 T 22-04-2016 IPR027416 YutG-like domain YPTB_RS05210 9f85ea1aba9f6537569324de4ee61718 161 PIRSF PIRSF006162 4 161 4.5E-62 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPTB_RS05210 9f85ea1aba9f6537569324de4ee61718 161 Pfam PF04608 Phosphatidylglycerophosphatase A 15 155 8.4E-55 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 SUPERFAMILY SSF53850 36 402 5.02E-93 T 22-04-2016 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 Gene3D G3DSA:3.40.190.10 159 329 2.8E-55 T 22-04-2016 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 Pfam PF13416 Bacterial extracellular solute-binding protein 57 350 1.9E-40 T 22-04-2016 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PANTHER PTHR30061 12 403 2.1E-141 T 22-04-2016 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 Gene3D G3DSA:3.40.190.10 39 158 2.5E-32 T 22-04-2016 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PANTHER PTHR30061:SF21 12 403 2.1E-141 T 22-04-2016 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 137 156 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 178 197 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 43 61 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 306 327 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 364 383 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 240 259 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 158 177 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS19705 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 77 95 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS17590 e593520621e7203a94c0255b4c5b0766 578 PANTHER PTHR30128 6 578 0.0 T 22-04-2016 YPTB_RS17590 e593520621e7203a94c0255b4c5b0766 578 Pfam PF00691 OmpA family 447 543 6.3E-15 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS17590 e593520621e7203a94c0255b4c5b0766 578 SUPERFAMILY SSF103088 427 548 2.22E-29 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS17590 e593520621e7203a94c0255b4c5b0766 578 Gene3D G3DSA:3.30.1330.60 434 551 1.1E-29 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS17590 e593520621e7203a94c0255b4c5b0766 578 PANTHER PTHR30128:SF11 6 578 0.0 T 22-04-2016 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 PANTHER PTHR24423:SF488 11 349 4.4E-181 T 22-04-2016 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:3.30.450.20 11 99 5.0E-19 T 22-04-2016 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF55874 198 346 4.32E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF47384 121 190 7.46E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:1.10.287.130 129 186 9.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00091 7 75 6.2E-7 T 22-04-2016 IPR000014 PAS domain YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 9.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00388 129 194 1.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF00989 PAS fold 11 98 4.2E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF55785 11 97 1.35E-5 T 22-04-2016 IPR000014 PAS domain YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 2.28E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 2.28E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 2.28E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:3.30.565.10 198 348 8.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 PANTHER PTHR24423 11 349 4.4E-181 T 22-04-2016 YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00387 233 349 8.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS00210 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 4.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 Hamap MF_01974 Methionine aminopeptidase [map]. 4 251 39.562 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 PANTHER PTHR10804 4 249 3.9E-135 T 22-04-2016 YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 SUPERFAMILY SSF55920 6 258 1.13E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 249 1.5E-90 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 Pfam PF00557 Metallopeptidase family M24 14 242 1.2E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 PANTHER PTHR10804:SF75 4 249 3.9E-135 T 22-04-2016 YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPTB_RS04410 59f94d016a129d10c640a1c5a064980e 261 Gene3D G3DSA:3.90.230.10 6 255 1.1E-91 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS18990 c11ac3d021a69d95fa331dab2f8bbc12 130 SUPERFAMILY SSF54211 5 130 2.69E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS18990 c11ac3d021a69d95fa331dab2f8bbc12 130 Gene3D G3DSA:3.30.230.10 4 130 2.9E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS18990 c11ac3d021a69d95fa331dab2f8bbc12 130 PANTHER PTHR21569 1 130 4.1E-77 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18990 c11ac3d021a69d95fa331dab2f8bbc12 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.996 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid YPTB_RS18990 c11ac3d021a69d95fa331dab2f8bbc12 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.1E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18990 c11ac3d021a69d95fa331dab2f8bbc12 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 YPTB_RS19845 3180ccf5749b8596112d53d7f35727af 373 Pfam PF02481 DNA recombination-mediator protein A 68 274 6.1E-76 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 YPTB_RS19845 3180ccf5749b8596112d53d7f35727af 373 Gene3D G3DSA:3.40.50.450 108 252 1.5E-11 T 22-04-2016 YPTB_RS19845 3180ccf5749b8596112d53d7f35727af 373 PANTHER PTHR32039:SF8 21 373 1.0E-141 T 22-04-2016 YPTB_RS19845 3180ccf5749b8596112d53d7f35727af 373 PANTHER PTHR32039 21 373 1.0E-141 T 22-04-2016 YPTB_RS19845 3180ccf5749b8596112d53d7f35727af 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 282 1.3E-82 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 YPTB_RS19845 3180ccf5749b8596112d53d7f35727af 373 SUPERFAMILY SSF102405 76 281 2.14E-41 T 22-04-2016 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 2.8E-81 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 Pfam PF00923 Transaldolase 3 206 2.0E-43 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 SUPERFAMILY SSF51569 1 216 4.61E-63 T 22-04-2016 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 Gene3D G3DSA:3.20.20.70 1 214 7.2E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 PANTHER PTHR10683:SF15 1 216 1.2E-150 T 22-04-2016 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS11770 0f11ad49a568abbc0a3bc6ad4cadc68a 221 PANTHER PTHR10683 1 216 1.2E-150 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Pfam PF01568 Molydopterin dinucleotide binding domain 830 896 1.1E-7 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 SUPERFAMILY SSF54862 81 213 5.44E-34 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 3.1E-11 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615:SF134 742 913 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615:SF134 496 686 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615:SF134 364 430 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615:SF134 3 320 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 7.8E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 SMART SM00926 221 275 1.9E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 661 1.7E-202 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Gene3D G3DSA:3.40.50.740 504 692 7.0E-33 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Gene3D G3DSA:3.40.50.740 286 340 7.0E-33 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Gene3D G3DSA:2.40.40.20 821 895 1.5E-11 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 SUPERFAMILY SSF54292 1 77 9.86E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 SUPERFAMILY SSF50692 821 896 7.46E-14 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Pfam PF00384 Molybdopterin oxidoreductase 554 637 1.3E-6 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Gene3D G3DSA:3.30.70.20 147 157 4.9E-5 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Gene3D G3DSA:3.30.70.20 198 227 4.9E-5 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 SMART SM00929 88 128 1.9E-19 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 8.4E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 SUPERFAMILY SSF53706 219 693 1.99E-79 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615 742 913 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615 496 686 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615 364 430 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 PANTHER PTHR11615 3 320 0.0 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Gene3D G3DSA:3.10.20.30 3 81 4.3E-7 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 Gene3D G3DSA:2.20.25.90 228 274 7.3E-14 T 22-04-2016 YPTB_RS14010 719ad272bd5a266008d6a83030164912 914 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YPTB_RS02190 7aaeb75657213b53e752f3e2b8973b8f 119 SUPERFAMILY SSF142906 1 115 1.09E-36 T 22-04-2016 YPTB_RS02190 7aaeb75657213b53e752f3e2b8973b8f 119 PANTHER PTHR35145 1 118 8.0E-43 T 22-04-2016 YPTB_RS02190 7aaeb75657213b53e752f3e2b8973b8f 119 Pfam PF04237 YjbR 11 102 3.9E-20 T 22-04-2016 IPR007351 Uncharacterised protein YjbR YPTB_RS21215 8c15f19107be5d110242f83faacf5f75 224 Gene3D G3DSA:1.20.950.20 1 210 2.9E-75 T 22-04-2016 YPTB_RS21215 8c15f19107be5d110242f83faacf5f75 224 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 8.4E-66 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 YPTB_RS21215 8c15f19107be5d110242f83faacf5f75 224 Pfam PF01292 Prokaryotic cytochrome b561 9 184 2.7E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPTB_RS21215 8c15f19107be5d110242f83faacf5f75 224 SUPERFAMILY SSF81342 4 206 1.65E-55 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPTB_RS21215 8c15f19107be5d110242f83faacf5f75 224 PANTHER PTHR30074 1 222 1.3E-104 T 22-04-2016 YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:3.40.50.970 593 789 1.2E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SUPERFAMILY SSF52518 120 541 3.2E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 PANTHER PTHR23152:SF4 1 935 0.0 T 22-04-2016 YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 2.4E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 PANTHER PTHR23152 1 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:3.40.50.970 162 550 7.0E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 2.3E-53 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 PIRSF PIRSF000157 1 934 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 1.8E-16 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SMART SM00861 593 786 9.2E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SUPERFAMILY SSF52518 576 793 7.23E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS06340 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF00676 Dehydrogenase E1 component 223 514 1.1E-50 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 8.9E-84 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 5.3E-182 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.563 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 SUPERFAMILY SSF51246 329 425 6.8E-34 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Gene3D G3DSA:3.30.470.20 191 328 1.6E-62 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 SUPERFAMILY SSF56059 104 323 1.06E-67 T 22-04-2016 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 PANTHER PTHR10520 1 426 3.7E-296 T 22-04-2016 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 3.9E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 SUPERFAMILY SSF52440 1 103 6.76E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 4.4E-34 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Gene3D G3DSA:3.90.600.10 331 424 3.1E-35 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 SMART SM01209 103 296 2.5E-141 T 22-04-2016 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Gene3D G3DSA:3.40.50.20 2 95 7.6E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 SMART SM01210 330 424 3.1E-55 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS01770 fb029471341faa3c9adb23364c3a8eaf 428 Gene3D G3DSA:3.30.1490.20 121 190 1.5E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 Pfam PF13954 PapC N-terminal domain 25 164 2.4E-34 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 Pfam PF00577 Outer membrane usher protein 183 753 1.2E-142 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 PANTHER PTHR30451:SF7 1 540 0.0 T 22-04-2016 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 PANTHER PTHR30451:SF7 561 853 0.0 T 22-04-2016 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 PANTHER PTHR30451 1 540 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 PANTHER PTHR30451 561 853 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 SUPERFAMILY SSF141729 22 142 1.28E-26 T 22-04-2016 YPTB_RS10540 e442e05a100ce75737643c0f30497286 854 Pfam PF13953 PapC C-terminal domain 762 833 2.1E-20 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS18815 ec7f1b4e732f1391a0ca1f3aca6c2e8c 496 PANTHER PTHR30536 1 496 2.0E-289 T 22-04-2016 YPTB_RS18815 ec7f1b4e732f1391a0ca1f3aca6c2e8c 496 SMART SM00858 11 82 3.9E-12 T 22-04-2016 IPR013974 SAF domain YPTB_RS18815 ec7f1b4e732f1391a0ca1f3aca6c2e8c 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 109 495 8.8E-155 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 YPTB_RS18815 ec7f1b4e732f1391a0ca1f3aca6c2e8c 496 Pfam PF08666 SAF domain 11 80 1.3E-11 T 22-04-2016 IPR013974 SAF domain YPTB_RS18815 ec7f1b4e732f1391a0ca1f3aca6c2e8c 496 PANTHER PTHR30536:SF5 1 496 2.0E-289 T 22-04-2016 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.7E-27 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.40.1380.20 327 468 7.9E-43 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF51621 1 74 3.0E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF51621 156 338 3.0E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.5E-185 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PANTHER PTHR11817 1 464 2.9E-255 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.20.20.60 169 326 3.6E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.20.20.60 2 72 3.6E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 2.8E-152 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF52935 323 469 9.68E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF50800 70 167 3.14E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPTB_RS12575 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:2.40.33.10 73 168 3.3E-32 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 Gene3D G3DSA:3.30.70.610 338 434 2.6E-23 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 Gene3D G3DSA:3.30.70.610 269 337 3.4E-22 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 SUPERFAMILY SSF55103 275 567 3.27E-113 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 Gene3D G3DSA:3.30.465.10 107 268 3.0E-83 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 Gene3D G3DSA:3.30.43.10 5 104 1.2E-6 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 Gene3D G3DSA:3.30.1370.20 435 519 3.5E-45 T 22-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 Pfam PF01565 FAD binding domain 47 169 3.1E-8 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 SUPERFAMILY SSF56176 12 271 1.42E-70 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 2.9E-145 T 22-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 PANTHER PTHR11748:SF82 1 191 8.8E-66 T 22-04-2016 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 PANTHER PTHR11748:SF82 242 317 8.8E-66 T 22-04-2016 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 PIRSF PIRSF000101 4 569 2.3E-289 T 22-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 PANTHER PTHR11748 1 191 8.8E-66 T 22-04-2016 YPTB_RS06750 b4357d52fdb897adb9443c3352510c78 570 PANTHER PTHR11748 242 317 8.8E-66 T 22-04-2016 YPTB_RS08530 afc53b3e7143e58ba863fec0e28986bc 297 PANTHER PTHR22572:SF118 5 296 4.0E-219 T 22-04-2016 YPTB_RS08530 afc53b3e7143e58ba863fec0e28986bc 297 Gene3D G3DSA:3.90.550.10 3 284 2.9E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS08530 afc53b3e7143e58ba863fec0e28986bc 297 Pfam PF00483 Nucleotidyl transferase 5 252 6.7E-22 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPTB_RS08530 afc53b3e7143e58ba863fec0e28986bc 297 SUPERFAMILY SSF53448 1 289 4.96E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS08530 afc53b3e7143e58ba863fec0e28986bc 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 273 3.6E-102 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YPTB_RS08530 afc53b3e7143e58ba863fec0e28986bc 297 PANTHER PTHR22572 5 296 4.0E-219 T 22-04-2016 YPTB_RS18370 a264fbdf510f077e983dfc44e53e81cc 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 4.9E-78 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 YPTB_RS18370 a264fbdf510f077e983dfc44e53e81cc 210 PANTHER PTHR11839 1 210 1.1E-134 T 22-04-2016 YPTB_RS18370 a264fbdf510f077e983dfc44e53e81cc 210 Pfam PF00293 NUDIX domain 59 179 5.3E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS18370 a264fbdf510f077e983dfc44e53e81cc 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS18370 a264fbdf510f077e983dfc44e53e81cc 210 Gene3D G3DSA:3.90.79.10 6 206 2.2E-55 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS18370 a264fbdf510f077e983dfc44e53e81cc 210 PANTHER PTHR11839:SF5 1 210 1.1E-134 T 22-04-2016 YPTB_RS18370 a264fbdf510f077e983dfc44e53e81cc 210 SUPERFAMILY SSF55811 9 205 2.03E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PANTHER PTHR30587:SF3 1 216 3.4E-163 T 22-04-2016 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 Pfam PF00813 FliP family 13 211 2.8E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 2.6E-84 T 22-04-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 YPTB_RS01935 2f0a1058cdeead245b051c15209b876c 216 PANTHER PTHR30587 1 216 3.4E-163 T 22-04-2016 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 Pfam PF00771 FHIPEP family 31 681 7.2E-266 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 7.2E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 7.2E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 7.2E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 7.2E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 7.2E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 7.2E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PANTHER PTHR30161 2 692 0.0 T 22-04-2016 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PANTHER PTHR30161:SF1 2 692 0.0 T 22-04-2016 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 1.7E-276 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 YPTB_RS09175 98c09812cb0aae4fd8ca3e24d4ce2453 692 PIRSF PIRSF005419 15 692 4.3E-240 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18590 8e0924970c517dfd4b579ff182147b3a 111 Pfam PF17090 Uncharacterised protein family 46 109 5.0E-11 T 22-04-2016 IPR031381 Uncharacterised protein YtcA YPTB_RS11465 0901941b6a45182f4709e592f68500f8 286 SUPERFAMILY SSF46785 5 79 3.47E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11465 0901941b6a45182f4709e592f68500f8 286 PANTHER PTHR30346:SF3 2 282 2.2E-91 T 22-04-2016 YPTB_RS11465 0901941b6a45182f4709e592f68500f8 286 Gene3D G3DSA:1.10.10.10 5 80 1.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11465 0901941b6a45182f4709e592f68500f8 286 PANTHER PTHR30346 2 282 2.2E-91 T 22-04-2016 YPTB_RS11465 0901941b6a45182f4709e592f68500f8 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14935 f3e20469bb3c9a9ab266aca5deed9ecb 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 6.3E-51 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 YPTB_RS14935 f3e20469bb3c9a9ab266aca5deed9ecb 152 PANTHER PTHR35146 1 152 9.7E-64 T 22-04-2016 YPTB_RS14935 f3e20469bb3c9a9ab266aca5deed9ecb 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.028 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 YPTB_RS14935 f3e20469bb3c9a9ab266aca5deed9ecb 152 PANTHER PTHR35146:SF1 1 152 9.7E-64 T 22-04-2016 YPTB_RS01280 e0a23c85c9530c4e3cb040ea36710156 84 PANTHER PTHR33279 8 80 3.5E-49 T 22-04-2016 YPTB_RS01280 e0a23c85c9530c4e3cb040ea36710156 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01280 e0a23c85c9530c4e3cb040ea36710156 84 SUPERFAMILY SSF64307 4 80 3.01E-27 T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01280 e0a23c85c9530c4e3cb040ea36710156 84 Gene3D G3DSA:3.30.110.40 5 80 1.6E-31 T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01280 e0a23c85c9530c4e3cb040ea36710156 84 Pfam PF01206 Sulfurtransferase TusA 10 79 1.4E-26 T 22-04-2016 IPR001455 TusA-like domain YPTB_RS01280 e0a23c85c9530c4e3cb040ea36710156 84 PANTHER PTHR33279:SF5 8 80 3.5E-49 T 22-04-2016 YPTB_RS01280 e0a23c85c9530c4e3cb040ea36710156 84 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.742 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 YPTB_RS05220 d7a1783741c067d5b7e2f27fb4e31da6 306 SUPERFAMILY SSF48576 9 290 2.01E-86 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPTB_RS05220 d7a1783741c067d5b7e2f27fb4e31da6 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPTB_RS05220 d7a1783741c067d5b7e2f27fb4e31da6 306 PANTHER PTHR12001 9 287 6.2E-108 T 22-04-2016 IPR017446 Polyprenyl synthetase-related YPTB_RS05220 d7a1783741c067d5b7e2f27fb4e31da6 306 Pfam PF00348 Polyprenyl synthetase 38 278 7.1E-57 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPTB_RS05220 d7a1783741c067d5b7e2f27fb4e31da6 306 PANTHER PTHR12001:SF23 9 287 6.2E-108 T 22-04-2016 YPTB_RS05220 d7a1783741c067d5b7e2f27fb4e31da6 306 Gene3D G3DSA:1.10.600.10 8 301 5.3E-90 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPTB_RS05220 d7a1783741c067d5b7e2f27fb4e31da6 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPTB_RS18835 bbac608414a79bac7f27656dc7f463b9 433 PANTHER PTHR11662 1 424 3.1E-261 T 22-04-2016 YPTB_RS18835 bbac608414a79bac7f27656dc7f463b9 433 Gene3D G3DSA:1.20.1250.20 7 200 7.0E-46 T 22-04-2016 YPTB_RS18835 bbac608414a79bac7f27656dc7f463b9 433 Pfam PF07690 Major Facilitator Superfamily 17 308 1.1E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS18835 bbac608414a79bac7f27656dc7f463b9 433 SUPERFAMILY SSF103473 3 413 1.96E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS18835 bbac608414a79bac7f27656dc7f463b9 433 Gene3D G3DSA:1.20.1250.20 217 419 5.7E-19 T 22-04-2016 YPTB_RS18835 bbac608414a79bac7f27656dc7f463b9 433 PIRSF PIRSF002808 1 426 1.5E-33 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YPTB_RS18835 bbac608414a79bac7f27656dc7f463b9 433 PANTHER PTHR11662:SF285 1 424 3.1E-261 T 22-04-2016 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 SMART SM00421 146 203 3.7E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 Pfam PF00072 Response regulator receiver domain 4 116 3.8E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 SUPERFAMILY SSF52172 3 131 2.99E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 PANTHER PTHR26402:SF506 2 215 1.5E-111 T 22-04-2016 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 SUPERFAMILY SSF46894 136 210 3.4E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 Gene3D G3DSA:1.10.10.10 127 210 8.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 PANTHER PTHR26402 2 215 1.5E-111 T 22-04-2016 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 SMART SM00448 2 115 4.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.7E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS09540 e0f975ea7bbb881a38438d3b97f1d90b 218 Gene3D G3DSA:3.40.50.2300 2 126 9.0E-33 T 22-04-2016 YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 Gene3D G3DSA:3.90.1150.10 305 430 1.1E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 43 429 2.0E-117 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 SUPERFAMILY SSF53383 37 433 5.92E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 PANTHER PTHR30244:SF11 277 436 1.2E-240 T 22-04-2016 YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 PANTHER PTHR30244:SF11 25 249 1.2E-240 T 22-04-2016 YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 PIRSF PIRSF000390 8 437 1.7E-127 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 PANTHER PTHR30244 277 436 1.2E-240 T 22-04-2016 YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 PANTHER PTHR30244 25 249 1.2E-240 T 22-04-2016 YPTB_RS05525 bcff0dbbdcf00ca04157931007c3df98 437 Gene3D G3DSA:3.40.640.10 39 304 8.3E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS00955 d3fb6039c5db2fa440c25ea4c92ca075 425 SUPERFAMILY SSF49401 255 423 5.97E-11 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS00955 d3fb6039c5db2fa440c25ea4c92ca075 425 PIRSF PIRSF029766 5 425 7.7E-186 T 22-04-2016 IPR011228 Uncharacterised conserved protein UCP029766 YPTB_RS00955 d3fb6039c5db2fa440c25ea4c92ca075 425 Pfam PF00419 Fimbrial protein 247 425 1.2E-27 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS00955 d3fb6039c5db2fa440c25ea4c92ca075 425 Gene3D G3DSA:2.60.40.1090 254 422 1.4E-9 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS06960 129efe2f7af4ae59eb266e662ea5ceb5 384 Gene3D G3DSA:1.20.1250.20 22 184 1.2E-16 T 22-04-2016 YPTB_RS06960 129efe2f7af4ae59eb266e662ea5ceb5 384 PANTHER PTHR23514:SF13 16 384 2.5E-153 T 22-04-2016 YPTB_RS06960 129efe2f7af4ae59eb266e662ea5ceb5 384 PANTHER PTHR23514 16 384 2.5E-153 T 22-04-2016 YPTB_RS06960 129efe2f7af4ae59eb266e662ea5ceb5 384 SUPERFAMILY SSF103473 22 378 4.19E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS06960 129efe2f7af4ae59eb266e662ea5ceb5 384 Gene3D G3DSA:1.20.1250.20 210 376 2.4E-10 T 22-04-2016 YPTB_RS06960 129efe2f7af4ae59eb266e662ea5ceb5 384 Pfam PF07690 Major Facilitator Superfamily 22 324 6.7E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS18925 3bfbbb79e19537497561249a7af9b3fc 191 SMART SM00749 51 114 2.0E-8 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPTB_RS18925 3bfbbb79e19537497561249a7af9b3fc 191 SMART SM00749 129 190 3.1E-4 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPTB_RS18925 3bfbbb79e19537497561249a7af9b3fc 191 Pfam PF04972 BON domain 46 114 1.6E-13 T 22-04-2016 IPR007055 BON domain YPTB_RS18925 3bfbbb79e19537497561249a7af9b3fc 191 Pfam PF04972 BON domain 125 190 5.3E-18 T 22-04-2016 IPR007055 BON domain YPTB_RS18925 3bfbbb79e19537497561249a7af9b3fc 191 PANTHER PTHR34606:SF4 1 190 8.2E-96 T 22-04-2016 YPTB_RS18925 3bfbbb79e19537497561249a7af9b3fc 191 PANTHER PTHR34606 1 190 8.2E-96 T 22-04-2016 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 SUPERFAMILY SSF57770 142 176 1.12E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 SUPERFAMILY SSF50249 568 674 6.61E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 1.0E-197 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PANTHER PTHR11946 6 630 6.6E-256 T 22-04-2016 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Gene3D G3DSA:2.40.50.140 566 675 5.5E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 SUPERFAMILY SSF52374 176 387 3.58E-101 T 22-04-2016 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 SUPERFAMILY SSF52374 6 141 3.58E-101 T 22-04-2016 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Gene3D G3DSA:2.20.28.20 145 176 2.2E-19 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 SUPERFAMILY SSF47323 390 546 1.42E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Pfam PF01588 Putative tRNA binding domain 579 672 7.7E-21 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Gene3D G3DSA:3.40.50.620 183 379 2.5E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Gene3D G3DSA:3.40.50.620 6 144 2.5E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Gene3D G3DSA:1.10.730.10 380 534 4.3E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.173 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 PANTHER PTHR11946:SF86 6 630 6.6E-256 T 22-04-2016 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 675 3.4E-44 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPTB_RS08440 f394aa74d86897915b6ae018b0c7a6cb 675 Pfam PF09334 tRNA synthetases class I (M) 8 396 4.2E-163 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 2.0E-51 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 7.0E-7 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 7.0E-7 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 PIRSF PIRSF001365 1 297 1.9E-66 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 Gene3D G3DSA:3.20.20.70 1 292 5.6E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 PANTHER PTHR12128 2 297 1.9E-151 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 PANTHER PTHR12128:SF30 2 297 1.9E-151 T 22-04-2016 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 SMART SM01130 3 294 1.1E-68 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPTB_RS14865 25fe26e4149f44c9390fa2699ff522d2 297 SUPERFAMILY SSF51569 1 292 2.3E-72 T 22-04-2016 YPTB_RS09370 1d8c784f34e4ea41c41f5233c4005b3e 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.8E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS09370 1d8c784f34e4ea41c41f5233c4005b3e 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.8E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS09370 1d8c784f34e4ea41c41f5233c4005b3e 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.8E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS09370 1d8c784f34e4ea41c41f5233c4005b3e 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 17.876 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS09370 1d8c784f34e4ea41c41f5233c4005b3e 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 103 1.7E-26 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS09370 1d8c784f34e4ea41c41f5233c4005b3e 103 PANTHER PTHR34653 1 103 8.5E-28 T 22-04-2016 YPTB_RS09370 1d8c784f34e4ea41c41f5233c4005b3e 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 102 3.6E-26 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 Pfam PF03466 LysR substrate binding domain 87 288 7.5E-41 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 Gene3D G3DSA:1.10.10.10 1 86 4.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 SUPERFAMILY SSF46785 1 109 6.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 Gene3D G3DSA:3.40.190.10 178 253 1.8E-17 T 22-04-2016 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 PANTHER PTHR30126 1 303 3.1E-203 T 22-04-2016 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 PANTHER PTHR30126:SF25 1 303 3.1E-203 T 22-04-2016 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 Gene3D G3DSA:3.40.190.10 91 177 5.3E-16 T 22-04-2016 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS01450 49bf38f455a39c2ab3818fd1ce0e2db0 317 SUPERFAMILY SSF53850 88 291 2.02E-38 T 22-04-2016 YPTB_RS09075 27908e4e45cf0d7baf78d06042693a46 454 Gene3D G3DSA:3.30.1330.90 10 157 1.1E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain YPTB_RS09075 27908e4e45cf0d7baf78d06042693a46 454 SUPERFAMILY SSF143548 16 157 2.33E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain YPTB_RS09075 27908e4e45cf0d7baf78d06042693a46 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.4E-223 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YPTB_RS09075 27908e4e45cf0d7baf78d06042693a46 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 2.9E-96 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit YPTB_RS09075 27908e4e45cf0d7baf78d06042693a46 454 PANTHER PTHR30182 2 453 0.0 T 22-04-2016 YPTB_RS09075 27908e4e45cf0d7baf78d06042693a46 454 PANTHER PTHR30182:SF4 2 453 0.0 T 22-04-2016 YPTB_RS09075 27908e4e45cf0d7baf78d06042693a46 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.2E-55 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 SUPERFAMILY SSF56053 1 82 1.11E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.7E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 PANTHER PTHR11655:SF14 1 176 2.1E-88 T 22-04-2016 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 SUPERFAMILY SSF56053 83 177 9.08E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 Gene3D G3DSA:3.90.930.12 83 177 3.9E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.759 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 PANTHER PTHR11655 1 176 2.1E-88 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 PIRSF PIRSF002162 1 177 2.0E-44 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 Pfam PF00347 Ribosomal protein L6 90 164 6.4E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 Pfam PF00347 Ribosomal protein L6 11 82 2.3E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 Gene3D G3DSA:3.90.930.12 2 82 7.7E-29 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.8E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.8E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS19940 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.8E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 PANTHER PTHR30108 1 497 6.8E-294 T 22-04-2016 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 SUPERFAMILY SSF50475 6 325 4.32E-128 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.872 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 SUPERFAMILY SSF143968 326 489 4.32E-68 T 22-04-2016 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 2.5E-172 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 2.8E-187 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 Gene3D G3DSA:1.20.5.570 458 494 7.5E-19 T 22-04-2016 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 PANTHER PTHR30108:SF1 1 497 6.8E-294 T 22-04-2016 YPTB_RS01535 90583bb4fa8fd5904052b14b2005fa44 498 Gene3D G3DSA:3.40.1670.10 340 457 1.7E-55 T 22-04-2016 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 4.1E-67 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 4.1E-67 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 4.1E-67 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 4.1E-67 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 4.1E-67 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 4.1E-67 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 SUPERFAMILY SSF55021 9 58 2.42E-8 T 22-04-2016 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PANTHER PTHR10520 15 276 3.9E-136 T 22-04-2016 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 Gene3D G3DSA:3.30.70.260 7 75 6.8E-12 T 22-04-2016 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 Gene3D G3DSA:3.40.50.170 88 280 4.5E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PANTHER PTHR10520:SF7 15 276 3.9E-136 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 1.2E-128 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 Pfam PF00551 Formyl transferase 88 264 3.9E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 SUPERFAMILY SSF53328 88 281 1.2E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 Pfam PF01842 ACT domain 10 70 5.1E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPTB_RS11485 e5455b8be4ed0f9803db52d2e21daf98 282 PIRSF PIRSF036480 6 282 3.9E-115 T 22-04-2016 YPTB_RS00590 8c365328ba9c7eae960124b5ef956073 174 Gene3D G3DSA:3.60.20.10 2 172 9.5E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS00590 8c365328ba9c7eae960124b5ef956073 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.7 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YPTB_RS00590 8c365328ba9c7eae960124b5ef956073 174 PANTHER PTHR32194 2 174 4.6E-128 T 22-04-2016 YPTB_RS00590 8c365328ba9c7eae960124b5ef956073 174 Pfam PF00227 Proteasome subunit 2 165 2.0E-21 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 YPTB_RS00590 8c365328ba9c7eae960124b5ef956073 174 PIRSF PIRSF039093 1 174 2.6E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YPTB_RS00590 8c365328ba9c7eae960124b5ef956073 174 SUPERFAMILY SSF56235 2 172 7.73E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS00590 8c365328ba9c7eae960124b5ef956073 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.2E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.40.10.10 146 258 8.6E-39 T 22-04-2016 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 349 1.0E-157 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.30.42.10 259 355 5.4E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 Pfam PF13180 PDZ domain 273 346 2.2E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PANTHER PTHR22939:SF93 9 351 8.6E-179 T 22-04-2016 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 SUPERFAMILY SSF50494 45 253 4.76E-59 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.40.10.10 40 143 8.5E-31 T 22-04-2016 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 Pfam PF13365 Trypsin-like peptidase domain 80 214 1.3E-26 T 22-04-2016 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 SMART SM00228 256 338 1.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 PANTHER PTHR22939 9 351 8.6E-179 T 22-04-2016 YPTB_RS19015 99490c20f6425c823a3cb73432c6b12c 362 SUPERFAMILY SSF50156 229 350 4.21E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 Pfam PF00664 ABC transporter transmembrane region 178 443 5.6E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 SUPERFAMILY SSF90123 166 473 3.66E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 Gene3D G3DSA:1.20.1560.10 165 470 1.0E-64 T 22-04-2016 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 Gene3D G3DSA:3.90.70.10 27 148 1.5E-27 T 22-04-2016 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 PANTHER PTHR24221 157 696 4.5E-123 T 22-04-2016 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 Pfam PF03412 Peptidase C39 family 21 149 1.8E-35 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 SMART SM00382 518 702 2.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 Gene3D G3DSA:3.40.50.300 492 702 9.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 SUPERFAMILY SSF52540 489 700 1.14E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00550 feaf9b7355686e8dddfbb3b453f89c1f 704 Pfam PF00005 ABC transporter 510 658 8.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS10260 d1f849b5c948933e659179feb1ad1bb0 194 Pfam PF00929 Exonuclease 23 184 5.8E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS10260 d1f849b5c948933e659179feb1ad1bb0 194 Gene3D G3DSA:3.30.420.10 16 191 3.8E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS10260 d1f849b5c948933e659179feb1ad1bb0 194 PANTHER PTHR30231:SF4 12 190 2.5E-25 T 22-04-2016 YPTB_RS10260 d1f849b5c948933e659179feb1ad1bb0 194 PANTHER PTHR30231 12 190 2.5E-25 T 22-04-2016 YPTB_RS10260 d1f849b5c948933e659179feb1ad1bb0 194 SMART SM00479 21 194 8.2E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS10260 d1f849b5c948933e659179feb1ad1bb0 194 SUPERFAMILY SSF53098 21 190 1.35E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 SUPERFAMILY SSF56655 1 258 1.96E-85 T 22-04-2016 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Pfam PF00459 Inositol monophosphatase family 2 257 2.3E-70 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Gene3D G3DSA:3.30.540.10 2 152 2.5E-51 T 22-04-2016 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PANTHER PTHR20854:SF4 1 267 2.3E-107 T 22-04-2016 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PANTHER PTHR20854 1 267 2.3E-107 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Gene3D G3DSA:3.40.190.80 153 259 9.4E-39 T 22-04-2016 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPTB_RS15480 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPTB_RS07575 569679c5c3867c98b305e57da31ef525 352 Pfam PF01032 FecCD transport family 33 346 5.2E-85 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS07575 569679c5c3867c98b305e57da31ef525 352 SUPERFAMILY SSF81345 14 347 1.57E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS07575 569679c5c3867c98b305e57da31ef525 352 Gene3D G3DSA:1.10.3470.10 17 348 1.2E-93 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS07575 569679c5c3867c98b305e57da31ef525 352 PANTHER PTHR30472:SF25 21 352 1.3E-119 T 22-04-2016 YPTB_RS07575 569679c5c3867c98b305e57da31ef525 352 PANTHER PTHR30472 21 352 1.3E-119 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.581 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Pfam PF04055 Radical SAM superfamily 26 124 7.8E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228 1 54 2.0E-61 T 22-04-2016 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228 73 222 2.0E-61 T 22-04-2016 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228:SF6 1 54 2.0E-61 T 22-04-2016 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228:SF6 73 222 2.0E-61 T 22-04-2016 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 SUPERFAMILY SSF102114 24 117 9.42E-7 T 22-04-2016 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PIRSF PIRSF000370 1 223 5.9E-71 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 8.1E-13 T 22-04-2016 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Gene3D G3DSA:3.20.20.70 29 122 2.0E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS04210 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 4.3E-112 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.845 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 SUPERFAMILY SSF53448 378 391 3.83E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 SUPERFAMILY SSF53448 17 294 3.83E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 Pfam PF00483 Nucleotidyl transferase 22 291 1.0E-65 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 PANTHER PTHR22572:SF10 21 398 5.1E-184 T 22-04-2016 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 Gene3D G3DSA:3.90.550.10 21 301 3.2E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 Gene3D G3DSA:3.90.550.10 344 386 3.2E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.1E-154 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 SUPERFAMILY SSF51161 313 414 5.13E-20 T 22-04-2016 IPR011004 Trimeric LpxA-like YPTB_RS20470 7b4aa4325e18e64ac084301d9dd29a25 428 PANTHER PTHR22572 21 398 5.1E-184 T 22-04-2016 YPTB_RS10615 d49a2cb497d7bb4d844f54051d10b9a3 386 Gene3D G3DSA:3.90.1150.10 247 384 8.8E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS10615 d49a2cb497d7bb4d844f54051d10b9a3 386 PANTHER PTHR11751 19 385 1.7E-121 T 22-04-2016 YPTB_RS10615 d49a2cb497d7bb4d844f54051d10b9a3 386 Gene3D G3DSA:3.40.640.10 58 246 1.7E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS10615 d49a2cb497d7bb4d844f54051d10b9a3 386 SUPERFAMILY SSF53383 7 385 3.98E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS10615 d49a2cb497d7bb4d844f54051d10b9a3 386 PANTHER PTHR11751:SF294 19 385 1.7E-121 T 22-04-2016 YPTB_RS10615 d49a2cb497d7bb4d844f54051d10b9a3 386 Pfam PF00155 Aminotransferase class I and II 55 375 8.8E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 Gene3D G3DSA:1.10.287.950 284 488 5.2E-56 T 22-04-2016 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 SMART SM00086 80 120 0.0025 T 22-04-2016 IPR001610 PAC motif YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 Gene3D G3DSA:3.30.450.20 23 114 1.1E-21 T 22-04-2016 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 513 3.5E-55 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 Pfam PF08447 PAS fold 31 114 7.9E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PANTHER PTHR32089:SF64 190 519 9.6E-143 T 22-04-2016 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PANTHER PTHR32089:SF64 51 170 9.6E-143 T 22-04-2016 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 SMART SM00283 269 516 1.9E-75 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 3.9E-12 T 22-04-2016 IPR000014 PAS domain YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 SUPERFAMILY SSF55785 23 114 6.81E-25 T 22-04-2016 IPR000014 PAS domain YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PANTHER PTHR32089 190 519 9.6E-143 T 22-04-2016 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PANTHER PTHR32089 51 170 9.6E-143 T 22-04-2016 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 Pfam PF00672 HAMP domain 196 264 1.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13190 6ce359d2ac2d5daed5dca6320959d063 526 SUPERFAMILY SSF58104 242 516 6.8E-66 T 22-04-2016 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 PANTHER PTHR21011 1 130 2.3E-50 T 22-04-2016 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 Pfam PF01250 Ribosomal protein S6 3 91 8.3E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 SUPERFAMILY SSF54995 1 103 1.83E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 Gene3D G3DSA:3.30.70.60 1 103 4.9E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.959 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.0E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPTB_RS02525 0a784ffdf5113f66e902cce07d92495a 130 PANTHER PTHR21011:SF1 1 130 2.3E-50 T 22-04-2016 YPTB_RS00230 14f51367caea4db5569375798f835c92 196 Gene3D G3DSA:1.10.150.240 16 76 2.4E-33 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPTB_RS00230 14f51367caea4db5569375798f835c92 196 PANTHER PTHR12725:SF63 4 189 1.8E-50 T 22-04-2016 YPTB_RS00230 14f51367caea4db5569375798f835c92 196 SUPERFAMILY SSF56784 3 188 1.06E-41 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS00230 14f51367caea4db5569375798f835c92 196 Gene3D G3DSA:3.40.50.1000 77 190 3.7E-31 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS00230 14f51367caea4db5569375798f835c92 196 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 184 4.0E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS00230 14f51367caea4db5569375798f835c92 196 Pfam PF13419 Haloacid dehalogenase-like hydrolase 60 184 2.7E-9 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS00230 14f51367caea4db5569375798f835c92 196 PANTHER PTHR12725 4 189 1.8E-50 T 22-04-2016 YPTB_RS07195 f874ea2a7e9b7d335eabafbcbb4e5024 334 PANTHER PTHR38772 2 334 8.3E-184 T 22-04-2016 YPTB_RS07195 f874ea2a7e9b7d335eabafbcbb4e5024 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.6E-99 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YPTB_RS07195 f874ea2a7e9b7d335eabafbcbb4e5024 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.235 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YPTB_RS18850 f2d4e963a1247a4369516008bab923fd 232 Pfam PF09335 SNARE associated Golgi protein 48 172 9.1E-20 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPTB_RS18850 f2d4e963a1247a4369516008bab923fd 232 PANTHER PTHR30353:SF11 1 232 4.6E-193 T 22-04-2016 YPTB_RS18850 f2d4e963a1247a4369516008bab923fd 232 PANTHER PTHR30353 1 232 4.6E-193 T 22-04-2016 IPR032818 DedA family YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 2.4E-143 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.5E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 5.2E-136 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 Gene3D G3DSA:3.40.50.1100 36 132 7.2E-38 T 22-04-2016 YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 PANTHER PTHR10314 3 319 1.5E-159 T 22-04-2016 YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 PANTHER PTHR10314:SF110 3 319 1.5E-159 T 22-04-2016 YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 Gene3D G3DSA:3.40.50.1100 133 313 1.7E-74 T 22-04-2016 YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YPTB_RS14720 40cd3f8b71fe239d211031a0339bdece 322 SUPERFAMILY SSF53686 4 309 1.96E-97 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:3.40.190.10 92 184 1.5E-20 T 22-04-2016 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 Pfam PF03466 LysR substrate binding domain 92 288 1.6E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 PANTHER PTHR30126 1 309 1.5E-226 T 22-04-2016 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 PANTHER PTHR30126:SF6 1 309 1.5E-226 T 22-04-2016 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 SUPERFAMILY SSF46785 1 85 7.39E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:3.40.190.10 185 262 5.3E-32 T 22-04-2016 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 SUPERFAMILY SSF53850 91 322 2.27E-43 T 22-04-2016 YPTB_RS11705 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:1.10.10.10 1 81 4.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19160 ccea71181273b71288603d57e04d67b4 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 3.3E-53 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS19160 ccea71181273b71288603d57e04d67b4 446 SUPERFAMILY SSF111283 13 446 1.44E-128 T 22-04-2016 YPTB_RS19160 ccea71181273b71288603d57e04d67b4 446 PANTHER PTHR30624:SF1 2 446 7.5E-200 T 22-04-2016 YPTB_RS19160 ccea71181273b71288603d57e04d67b4 446 PANTHER PTHR30624 2 446 7.5E-200 T 22-04-2016 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 PANTHER PTHR30332:SF4 1 499 0.0 T 22-04-2016 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 PANTHER PTHR30332 1 499 0.0 T 22-04-2016 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 34 496 4.7E-186 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 441 474 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 Pfam PF00263 Bacterial type II and III secretion system protein 336 492 2.6E-35 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 Pfam PF03958 Bacterial type II/III secretion system short domain 181 273 7.5E-19 T 22-04-2016 IPR005644 NolW-like YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 193 210 7.1E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 474 493 7.1E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 275 295 7.1E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 349 368 7.1E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPTB_RS01860 3fb4a185bff1448765ab9e69a310d225 499 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 383 398 7.1E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322 162 193 3.4E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322 21 146 3.4E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 Gene3D G3DSA:3.40.50.720 12 255 1.7E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 5.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 5.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 5.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 254 1.1E-68 T 22-04-2016 YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 SUPERFAMILY SSF51735 16 255 9.52E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322:SF242 162 193 3.4E-61 T 22-04-2016 YPTB_RS04340 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322:SF242 21 146 3.4E-61 T 22-04-2016 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 SMART SM00304 216 268 1.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PANTHER PTHR32089 35 519 1.8E-208 T 22-04-2016 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 Pfam PF00672 HAMP domain 196 264 5.6E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 1.0E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 SUPERFAMILY SSF47170 25 182 4.71E-50 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 SMART SM00319 44 182 4.2E-39 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 SMART SM00283 269 516 4.8E-95 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 PANTHER PTHR32089:SF48 35 519 1.8E-208 T 22-04-2016 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 Pfam PF02203 Tar ligand binding domain homologue 1 175 2.7E-52 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 Gene3D G3DSA:1.20.120.30 35 181 3.4E-53 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 Gene3D G3DSA:1.10.287.950 284 488 1.7E-63 T 22-04-2016 YPTB_RS13065 3fbaab0e55771a58f8e5c055be7b75c9 557 SUPERFAMILY SSF58104 236 522 1.57E-76 T 22-04-2016 YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 183 6.5E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 1.7E-25 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 PANTHER PTHR18901 2 222 1.7E-66 T 22-04-2016 YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 SUPERFAMILY SSF56784 4 212 7.31E-47 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 PANTHER PTHR18901:SF2 2 222 1.7E-66 T 22-04-2016 YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 Gene3D G3DSA:3.40.50.1000 3 19 3.1E-32 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 Gene3D G3DSA:3.40.50.1000 88 213 3.1E-32 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS21345 d6a216f6297bd1008f806d786fb1d370 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 SUPERFAMILY SSF103473 281 469 1.44E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 SUPERFAMILY SSF103473 20 223 1.44E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 Gene3D G3DSA:1.20.1250.20 290 467 1.3E-17 T 22-04-2016 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 Hamap MF_01238 Putative sialic acid transporter [nanT]. 14 505 47.335 T 22-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 Pfam PF07690 Major Facilitator Superfamily 39 308 9.0E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 Gene3D G3DSA:1.20.1250.20 29 220 9.6E-38 T 22-04-2016 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 PANTHER PTHR23508 1 240 0.0 T 22-04-2016 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 PANTHER PTHR23508 283 495 0.0 T 22-04-2016 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 PANTHER PTHR23508:SF3 1 240 0.0 T 22-04-2016 YPTB_RS14830 26849615a7bc986ec7659eedf6222bc7 510 PANTHER PTHR23508:SF3 283 495 0.0 T 22-04-2016 YPTB_RS18555 4b308344c0613b413ff714e6eb49d342 126 PANTHER PTHR11803 1 124 8.4E-103 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS18555 4b308344c0613b413ff714e6eb49d342 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 22-04-2016 IPR019897 RidA, conserved site YPTB_RS18555 4b308344c0613b413ff714e6eb49d342 126 Gene3D G3DSA:3.30.1330.40 2 124 9.5E-47 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS18555 4b308344c0613b413ff714e6eb49d342 126 Pfam PF01042 Endoribonuclease L-PSP 7 124 1.6E-44 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS18555 4b308344c0613b413ff714e6eb49d342 126 PANTHER PTHR11803:SF20 1 124 8.4E-103 T 22-04-2016 YPTB_RS18555 4b308344c0613b413ff714e6eb49d342 126 SUPERFAMILY SSF55298 2 125 1.37E-44 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS18555 4b308344c0613b413ff714e6eb49d342 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 4.5E-50 T 22-04-2016 IPR006056 RidA family YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 PANTHER PTHR34475:SF1 227 359 9.4E-57 T 22-04-2016 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 PANTHER PTHR34475:SF1 2 196 9.4E-57 T 22-04-2016 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 SMART SM00530 18 79 1.7E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 362 42.718 T 22-04-2016 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 PANTHER PTHR34475 227 359 9.4E-57 T 22-04-2016 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 PANTHER PTHR34475 2 196 9.4E-57 T 22-04-2016 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 Pfam PF13464 Domain of unknown function (DUF4115) 285 359 7.7E-24 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 SUPERFAMILY SSF47413 12 81 4.56E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 Pfam PF13413 Helix-turn-helix domain 18 79 1.5E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS15380 6ca616e2c7a4a6488b57b4644c373909 362 Gene3D G3DSA:1.10.260.40 9 85 1.4E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS17105 a9d24b26da556ac0a19f091c9ce0472c 531 Pfam PF03406 Phage tail fibre repeat 306 333 1.8E-9 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 YPTB_RS17105 a9d24b26da556ac0a19f091c9ce0472c 531 Pfam PF12571 Phage tail-collar fibre protein 2 157 4.5E-34 T 22-04-2016 IPR022225 Phage tail fibre protein YPTB_RS05105 464dd432d82584455099ef359e022a14 354 SUPERFAMILY SSF53850 70 351 4.6E-67 T 22-04-2016 YPTB_RS05105 464dd432d82584455099ef359e022a14 354 Pfam PF12849 PBP superfamily domain 67 319 8.7E-30 T 22-04-2016 IPR024370 PBP domain YPTB_RS05105 464dd432d82584455099ef359e022a14 354 Gene3D G3DSA:3.40.190.10 72 150 2.3E-8 T 22-04-2016 YPTB_RS05105 464dd432d82584455099ef359e022a14 354 Gene3D G3DSA:3.40.190.10 296 348 2.3E-8 T 22-04-2016 YPTB_RS05105 464dd432d82584455099ef359e022a14 354 PANTHER PTHR30570:SF5 1 350 9.5E-252 T 22-04-2016 YPTB_RS05105 464dd432d82584455099ef359e022a14 354 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 46 338 1.2E-68 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 YPTB_RS05105 464dd432d82584455099ef359e022a14 354 Gene3D G3DSA:3.40.190.10 153 295 2.4E-34 T 22-04-2016 YPTB_RS05105 464dd432d82584455099ef359e022a14 354 PANTHER PTHR30570 1 350 9.5E-252 T 22-04-2016 YPTB_RS13090 03397e324fbbfc09d17e0d6d3fb8e8de 282 PANTHER PTHR30329:SF2 1 280 1.2E-142 T 22-04-2016 YPTB_RS13090 03397e324fbbfc09d17e0d6d3fb8e8de 282 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 67 4.1E-19 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain YPTB_RS13090 03397e324fbbfc09d17e0d6d3fb8e8de 282 Pfam PF00691 OmpA family 159 253 1.5E-12 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS13090 03397e324fbbfc09d17e0d6d3fb8e8de 282 PANTHER PTHR30329 1 280 1.2E-142 T 22-04-2016 YPTB_RS13090 03397e324fbbfc09d17e0d6d3fb8e8de 282 Gene3D G3DSA:3.30.1330.60 151 263 6.2E-17 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS13090 03397e324fbbfc09d17e0d6d3fb8e8de 282 SUPERFAMILY SSF103088 155 263 5.76E-19 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 PANTHER PTHR34823:SF2 6 527 0.0 T 22-04-2016 YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 38 241 7.2E-33 T 22-04-2016 IPR004302 Chitin-binding protein, N-terminal YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 PANTHER PTHR34823 6 527 0.0 T 22-04-2016 YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 SMART SM00089 367 451 2.8E-4 T 22-04-2016 IPR022409 PKD/Chitinase domain YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 Gene3D G3DSA:2.60.40.670 364 449 8.2E-8 T 22-04-2016 IPR000601 PKD domain YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 Gene3D G3DSA:2.70.50.50 38 244 8.8E-44 T 22-04-2016 YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 SUPERFAMILY SSF81296 38 244 4.76E-39 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS04995 6c78c3397caa833d0385c56c34e23f75 534 SUPERFAMILY SSF49299 364 450 1.96E-8 T 22-04-2016 IPR000601 PKD domain YPTB_RS20420 fef8e4010eb94f23ab96a5b2393d624e 109 PANTHER PTHR12231 23 98 1.1E-14 T 22-04-2016 YPTB_RS20420 fef8e4010eb94f23ab96a5b2393d624e 109 Pfam PF00581 Rhodanese-like domain 15 98 1.3E-14 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS20420 fef8e4010eb94f23ab96a5b2393d624e 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.994 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YPTB_RS20420 fef8e4010eb94f23ab96a5b2393d624e 109 Gene3D G3DSA:3.40.250.10 2 99 2.6E-28 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS20420 fef8e4010eb94f23ab96a5b2393d624e 109 SMART SM00450 7 102 5.0E-21 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS20420 fef8e4010eb94f23ab96a5b2393d624e 109 SUPERFAMILY SSF52821 2 101 1.83E-27 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS18160 0657332377066f49ee7b237659b82455 359 PANTHER PTHR30532:SF2 25 357 4.3E-189 T 22-04-2016 YPTB_RS18160 0657332377066f49ee7b237659b82455 359 Gene3D G3DSA:3.40.50.1980 55 183 1.0E-23 T 22-04-2016 YPTB_RS18160 0657332377066f49ee7b237659b82455 359 Pfam PF01497 Periplasmic binding protein 128 321 1.5E-21 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS18160 0657332377066f49ee7b237659b82455 359 SUPERFAMILY SSF53807 52 333 9.03E-44 T 22-04-2016 YPTB_RS18160 0657332377066f49ee7b237659b82455 359 PANTHER PTHR30532 25 357 4.3E-189 T 22-04-2016 YPTB_RS18160 0657332377066f49ee7b237659b82455 359 Gene3D G3DSA:3.40.50.1980 184 346 8.0E-26 T 22-04-2016 YPTB_RS03280 86e0a9bb73b2ca3f67318a448129a3ad 262 PIRSF PIRSF005902 1 259 4.4E-67 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS03280 86e0a9bb73b2ca3f67318a448129a3ad 262 PANTHER PTHR10060 4 259 2.8E-87 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS03280 86e0a9bb73b2ca3f67318a448129a3ad 262 SUPERFAMILY SSF51556 4 258 5.37E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS03280 86e0a9bb73b2ca3f67318a448129a3ad 262 Gene3D G3DSA:3.20.20.140 2 257 1.8E-76 T 22-04-2016 YPTB_RS03280 86e0a9bb73b2ca3f67318a448129a3ad 262 Pfam PF01026 TatD related DNase 5 256 1.0E-65 T 22-04-2016 IPR001130 TatD family GO:0016788 YPTB_RS03280 86e0a9bb73b2ca3f67318a448129a3ad 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPTB_RS17170 b20eab5d05f8f79fc1417c01b84809dc 485 PANTHER PTHR30092 1 442 2.4E-199 T 22-04-2016 YPTB_RS17170 b20eab5d05f8f79fc1417c01b84809dc 485 PIRSF PIRSF004548 1 459 1.3E-194 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD YPTB_RS17170 b20eab5d05f8f79fc1417c01b84809dc 485 Pfam PF06123 Inner membrane protein CreD 6 428 3.1E-150 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD YPTB_RS02875 0d1ca9dc8a68369b91241bc8c8672b70 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 272 9.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02875 0d1ca9dc8a68369b91241bc8c8672b70 279 PANTHER PTHR32243 1 279 9.2E-155 T 22-04-2016 YPTB_RS02875 0d1ca9dc8a68369b91241bc8c8672b70 279 SUPERFAMILY SSF161098 3 279 3.74E-66 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02875 0d1ca9dc8a68369b91241bc8c8672b70 279 PANTHER PTHR32243:SF38 1 279 9.2E-155 T 22-04-2016 YPTB_RS02875 0d1ca9dc8a68369b91241bc8c8672b70 279 Gene3D G3DSA:1.10.3720.10 3 266 1.6E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 3.6E-212 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 Gene3D G3DSA:1.10.730.10 582 678 4.9E-5 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 SUPERFAMILY SSF109604 339 536 1.67E-15 T 22-04-2016 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.636 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 Pfam PF05746 DALR anticodon binding domain 582 679 4.0E-8 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 PANTHER PTHR30075 1 689 0.0 T 22-04-2016 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21145 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS07185 7c256689a7e11381144d3c0de77e31c1 598 PANTHER PTHR10342:SF215 231 579 6.0E-164 T 22-04-2016 YPTB_RS07185 7c256689a7e11381144d3c0de77e31c1 598 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 5.3E-108 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal YPTB_RS07185 7c256689a7e11381144d3c0de77e31c1 598 PANTHER PTHR10342 231 579 6.0E-164 T 22-04-2016 YPTB_RS07185 7c256689a7e11381144d3c0de77e31c1 598 SUPERFAMILY SSF53649 256 582 4.51E-50 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS07185 7c256689a7e11381144d3c0de77e31c1 598 Gene3D G3DSA:3.40.720.10 260 533 4.1E-32 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS07185 7c256689a7e11381144d3c0de77e31c1 598 Pfam PF00884 Sulfatase 260 512 1.5E-25 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPTB_RS07185 7c256689a7e11381144d3c0de77e31c1 598 PIRSF PIRSF004950 6 598 4.4E-244 T 22-04-2016 IPR012159 Inner membrane protein YejM YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 SUPERFAMILY SSF53474 251 353 2.32E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 SUPERFAMILY SSF53474 58 205 2.32E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 Pfam PF01738 Dienelactone hydrolase family 75 191 8.4E-6 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 Gene3D G3DSA:3.40.50.1820 64 363 3.1E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630:SF49 45 204 8.9E-99 T 22-04-2016 YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630:SF49 224 363 8.9E-99 T 22-04-2016 YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630 45 204 8.9E-99 T 22-04-2016 YPTB_RS10930 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630 224 363 8.9E-99 T 22-04-2016 YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 Pfam PF00460 Flagella basal body rod protein 5 35 1.7E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 SUPERFAMILY SSF117143 92 222 4.45E-37 T 22-04-2016 YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 4.7E-27 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 PANTHER PTHR30435:SF19 1 261 3.8E-133 T 22-04-2016 YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 1.4E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 9.7E-43 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 PANTHER PTHR30435 1 261 3.8E-133 T 22-04-2016 YPTB_RS18035 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 3.6E-109 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 YPTB_RS12365 ba832b7e4258813a7a771d75fb96373a 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.2E-35 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YPTB_RS12365 ba832b7e4258813a7a771d75fb96373a 75 Pfam PF06667 Phage shock protein B 4 74 8.5E-33 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YPTB_RS10455 40089f009c491763e1646387a9efa849 96 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 12 90 2.3E-23 T 22-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 Gene3D G3DSA:3.40.50.720 1 145 1.2E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.3E-45 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 2.2E-51 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 SUPERFAMILY SSF51735 1 145 5.31E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 PANTHER PTHR11540:SF22 1 312 6.1E-241 T 22-04-2016 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 PANTHER PTHR11540 1 312 6.1E-241 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 PIRSF PIRSF000102 1 310 2.8E-60 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.859 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 9.8E-137 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 SUPERFAMILY SSF56327 146 311 8.65E-43 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPTB_RS02640 0bf707f17b3a3a3db68d6ed5f586e754 312 Gene3D G3DSA:3.90.110.10 147 311 1.4E-63 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPTB_RS13405 229a3044ad45cbd84b33bcd425b5ecf9 212 Pfam PF02223 Thymidylate kinase 8 198 3.1E-61 T 22-04-2016 YPTB_RS13405 229a3044ad45cbd84b33bcd425b5ecf9 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YPTB_RS13405 229a3044ad45cbd84b33bcd425b5ecf9 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 1.6E-63 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YPTB_RS13405 229a3044ad45cbd84b33bcd425b5ecf9 212 Gene3D G3DSA:3.40.50.300 3 207 2.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13405 229a3044ad45cbd84b33bcd425b5ecf9 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.253 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YPTB_RS13405 229a3044ad45cbd84b33bcd425b5ecf9 212 SUPERFAMILY SSF52540 1 208 3.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13405 229a3044ad45cbd84b33bcd425b5ecf9 212 PANTHER PTHR10344 1 210 2.0E-75 T 22-04-2016 YPTB_RS19050 5f27a101a37945e59adc77b280409d37 272 PANTHER PTHR24220:SF368 13 272 2.4E-202 T 22-04-2016 YPTB_RS19050 5f27a101a37945e59adc77b280409d37 272 Gene3D G3DSA:3.40.50.300 10 242 2.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19050 5f27a101a37945e59adc77b280409d37 272 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS19050 5f27a101a37945e59adc77b280409d37 272 Pfam PF00005 ABC transporter 29 175 4.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS19050 5f27a101a37945e59adc77b280409d37 272 SMART SM00382 36 233 3.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19050 5f27a101a37945e59adc77b280409d37 272 PANTHER PTHR24220 13 272 2.4E-202 T 22-04-2016 YPTB_RS19050 5f27a101a37945e59adc77b280409d37 272 SUPERFAMILY SSF52540 11 240 4.44E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06875 d2bb2886a7072ed5a1eb01152fb35680 296 PANTHER PTHR32322:SF8 1 296 3.1E-160 T 22-04-2016 YPTB_RS06875 d2bb2886a7072ed5a1eb01152fb35680 296 PANTHER PTHR32322 1 296 3.1E-160 T 22-04-2016 YPTB_RS06875 d2bb2886a7072ed5a1eb01152fb35680 296 SUPERFAMILY SSF103481 187 290 9.55E-13 T 22-04-2016 YPTB_RS06875 d2bb2886a7072ed5a1eb01152fb35680 296 SUPERFAMILY SSF103481 45 146 6.02E-12 T 22-04-2016 YPTB_RS06875 d2bb2886a7072ed5a1eb01152fb35680 296 Pfam PF00892 EamA-like transporter family 154 287 5.3E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS06875 d2bb2886a7072ed5a1eb01152fb35680 296 Pfam PF00892 EamA-like transporter family 16 144 2.9E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS01005 b9d105ad27256075e90badec73548846 428 PANTHER PTHR24031:SF173 1 425 1.4E-276 T 22-04-2016 YPTB_RS01005 b9d105ad27256075e90badec73548846 428 Gene3D G3DSA:3.40.50.300 8 230 6.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01005 b9d105ad27256075e90badec73548846 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB_RS01005 b9d105ad27256075e90badec73548846 428 SUPERFAMILY SSF52540 84 363 9.86E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01005 b9d105ad27256075e90badec73548846 428 PANTHER PTHR24031 1 425 1.4E-276 T 22-04-2016 YPTB_RS01005 b9d105ad27256075e90badec73548846 428 SMART SM00490 270 351 4.5E-30 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS01005 b9d105ad27256075e90badec73548846 428 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.0E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS01005 b9d105ad27256075e90badec73548846 428 Pfam PF00271 Helicase conserved C-terminal domain 243 351 4.0E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS01005 b9d105ad27256075e90badec73548846 428 SMART SM00487 28 234 1.1E-50 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS01005 b9d105ad27256075e90badec73548846 428 Gene3D G3DSA:3.40.50.300 231 382 6.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01005 b9d105ad27256075e90badec73548846 428 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.548 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 Gene3D G3DSA:3.50.50.60 3 186 1.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 Gene3D G3DSA:3.50.50.60 339 395 1.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PANTHER PTHR10617 2 286 4.9E-134 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PANTHER PTHR10617 330 396 4.9E-134 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 Gene3D G3DSA:1.10.8.260 270 322 9.2E-24 T 22-04-2016 IPR023166 HI0933 insert-like domain YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 SUPERFAMILY SSF51905 3 188 3.62E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 SUPERFAMILY SSF51905 337 395 3.62E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PANTHER PTHR10617:SF103 2 286 4.9E-134 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PANTHER PTHR10617:SF103 330 396 4.9E-134 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 1.0E-128 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 SUPERFAMILY SSF160996 190 338 3.53E-43 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 3.7E-8 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.7E-8 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 3.7E-8 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 Gene3D G3DSA:2.40.30.10 188 269 5.3E-29 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 Pfam PF03486 HI0933-like protein 4 392 5.4E-157 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.8E-5 T 22-04-2016 YPTB_RS20600 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 5.8E-5 T 22-04-2016 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 Pfam PF02107 Flagellar L-ring protein 45 218 1.1E-57 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 PANTHER PTHR34933:SF2 1 219 1.2E-118 T 22-04-2016 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 160 176 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 66 78 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 134 149 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 181 195 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 197 211 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 218 25.186 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS18030 85fac9e0c4de9f802e35732bd33a0d31 221 PANTHER PTHR34933 1 219 1.2E-118 T 22-04-2016 YPTB_RS07570 0408795283ea49a278318fd59b10de7d 363 Gene3D G3DSA:3.40.50.1980 170 340 8.6E-23 T 22-04-2016 YPTB_RS07570 0408795283ea49a278318fd59b10de7d 363 PANTHER PTHR30535:SF5 1 362 1.4E-87 T 22-04-2016 YPTB_RS07570 0408795283ea49a278318fd59b10de7d 363 Gene3D G3DSA:3.40.50.1980 63 169 5.2E-12 T 22-04-2016 YPTB_RS07570 0408795283ea49a278318fd59b10de7d 363 PANTHER PTHR30535 1 362 1.4E-87 T 22-04-2016 YPTB_RS07570 0408795283ea49a278318fd59b10de7d 363 SUPERFAMILY SSF53807 24 331 6.28E-40 T 22-04-2016 YPTB_RS07570 0408795283ea49a278318fd59b10de7d 363 Pfam PF01497 Periplasmic binding protein 81 306 1.5E-27 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS10910 a55b9f65a8e641af4f8b099dd32c1cf9 156 SUPERFAMILY SSF51182 35 155 3.56E-29 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS10910 a55b9f65a8e641af4f8b099dd32c1cf9 156 Pfam PF07883 Cupin domain 66 132 2.4E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YPTB_RS10910 a55b9f65a8e641af4f8b099dd32c1cf9 156 PANTHER PTHR33570 1 156 2.7E-65 T 22-04-2016 YPTB_RS10910 a55b9f65a8e641af4f8b099dd32c1cf9 156 PANTHER PTHR33570:SF5 1 156 2.7E-65 T 22-04-2016 YPTB_RS10910 a55b9f65a8e641af4f8b099dd32c1cf9 156 Gene3D G3DSA:2.60.120.10 33 154 1.4E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS04785 ebbee38d337c7bc9a6f675468d83e69b 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 105 5.9E-17 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 460 2.1E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 Pfam PF00367 phosphotransferase system, EIIB 404 436 2.2E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 PANTHER PTHR30009 6 477 2.4E-264 T 22-04-2016 YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 3.4E-227 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 SUPERFAMILY SSF55604 401 474 1.14E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 PANTHER PTHR30009:SF2 6 477 2.4E-264 T 22-04-2016 YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 2.9E-83 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPTB_RS13390 5dda3af317c5679a0f03ea27f8f4d3ec 477 Gene3D G3DSA:3.30.1360.60 400 474 2.9E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS07230 d0d272b9e34abdb72ea05626854ce49c 341 Gene3D G3DSA:1.10.3720.10 135 337 1.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07230 d0d272b9e34abdb72ea05626854ce49c 341 PANTHER PTHR30325 1 341 7.6E-207 T 22-04-2016 YPTB_RS07230 d0d272b9e34abdb72ea05626854ce49c 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 2.0E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07230 d0d272b9e34abdb72ea05626854ce49c 341 SUPERFAMILY SSF161098 136 321 1.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07230 d0d272b9e34abdb72ea05626854ce49c 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 12 49 1.2E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 30.985 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 PANTHER PTHR11715 1 128 1.6E-73 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 PANTHER PTHR11715:SF12 1 128 1.6E-73 T 22-04-2016 YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 2.8E-53 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 SUPERFAMILY SSF51230 4 127 5.8E-43 T 22-04-2016 IPR011053 Single hybrid motif YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 Gene3D G3DSA:2.40.50.100 7 128 8.0E-49 T 22-04-2016 YPTB_RS17235 e43667fc284c08e165691a2d2cefeed5 128 Pfam PF01597 Glycine cleavage H-protein 8 127 1.1E-45 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YPTB_RS16340 2ca3e917b4fe92a51ed98cea490cbb2e 147 SUPERFAMILY SSF82649 3 144 1.2E-45 T 22-04-2016 YPTB_RS16340 2ca3e917b4fe92a51ed98cea490cbb2e 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 141 1.1E-78 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPTB_RS16340 2ca3e917b4fe92a51ed98cea490cbb2e 147 PANTHER PTHR12735 2 146 3.4E-63 T 22-04-2016 YPTB_RS16340 2ca3e917b4fe92a51ed98cea490cbb2e 147 Pfam PF02657 Fe-S metabolism associated domain 18 138 3.1E-40 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 YPTB_RS16340 2ca3e917b4fe92a51ed98cea490cbb2e 147 PANTHER PTHR12735:SF11 2 146 3.4E-63 T 22-04-2016 YPTB_RS16340 2ca3e917b4fe92a51ed98cea490cbb2e 147 Gene3D G3DSA:3.90.1010.10 2 144 3.3E-50 T 22-04-2016 YPTB_RS14715 41795cb14b36e777735f215afbc48dc3 244 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 6 222 9.1E-46 T 22-04-2016 YPTB_RS14715 41795cb14b36e777735f215afbc48dc3 244 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 1 240 28.747 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 YPTB_RS14715 41795cb14b36e777735f215afbc48dc3 244 PANTHER PTHR37468 1 242 3.4E-107 T 22-04-2016 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.667 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:3.40.50.300 3 208 6.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:2.40.30.10 300 393 3.9E-46 T 22-04-2016 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:2.40.30.10 209 298 5.6E-37 T 22-04-2016 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 PANTHER PTHR23115:SF151 1 393 0.0 T 22-04-2016 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 PANTHER PTHR23115 1 393 0.0 T 22-04-2016 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF50465 298 393 9.21E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.3E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF50447 205 301 4.71E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-57 T 22-04-2016 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 2.7E-236 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF52540 6 219 6.27E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20035 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.2E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 5.5E-159 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.453 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 Gene3D G3DSA:3.20.20.70 1 335 2.4E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 PIRSF PIRSF000164 13 336 4.0E-96 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 PANTHER PTHR11938 6 332 1.4E-109 T 22-04-2016 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 SUPERFAMILY SSF51395 1 334 3.19E-106 T 22-04-2016 YPTB_RS07940 a7c1b6562f4a670e133f80821d34483d 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 4.6E-92 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF51905 107 271 3.24E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF51905 1 54 3.24E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF51905 359 417 3.24E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.832 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847 1 63 4.2E-268 T 22-04-2016 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847 107 434 4.2E-268 T 22-04-2016 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.5E-71 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847:SF148 1 63 4.2E-268 T 22-04-2016 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847:SF148 107 434 4.2E-268 T 22-04-2016 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF54373 269 359 1.96E-17 T 22-04-2016 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 108 122 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 190 269 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 359 417 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 1 55 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.30.9.10 270 358 5.9E-16 T 22-04-2016 YPTB_RS11360 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.30.9.10 135 189 5.9E-16 T 22-04-2016 YPTB_RS10810 1444a35e54a959160cc8d652122cd994 335 PANTHER PTHR34069:SF2 10 333 2.7E-71 T 22-04-2016 YPTB_RS10810 1444a35e54a959160cc8d652122cd994 335 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 246 333 7.3E-24 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPTB_RS10810 1444a35e54a959160cc8d652122cd994 335 Gene3D G3DSA:3.40.47.10 14 171 6.1E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS10810 1444a35e54a959160cc8d652122cd994 335 PANTHER PTHR34069 10 333 2.7E-71 T 22-04-2016 YPTB_RS10810 1444a35e54a959160cc8d652122cd994 335 SUPERFAMILY SSF53901 13 333 6.38E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS10810 1444a35e54a959160cc8d652122cd994 335 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 190 2.3E-21 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPTB_RS10810 1444a35e54a959160cc8d652122cd994 335 Gene3D G3DSA:3.40.47.10 172 333 1.6E-36 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS12870 fc8fe09d46023afbbc71d832b2fedfbd 182 PIRSF PIRSF030780 1 182 1.8E-106 T 22-04-2016 IPR016956 Inner membrane protein YdjM YPTB_RS12870 fc8fe09d46023afbbc71d832b2fedfbd 182 PANTHER PTHR35531:SF1 1 182 2.4E-67 T 22-04-2016 YPTB_RS12870 fc8fe09d46023afbbc71d832b2fedfbd 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 163 9.7E-36 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPTB_RS12870 fc8fe09d46023afbbc71d832b2fedfbd 182 PANTHER PTHR35531 1 182 2.4E-67 T 22-04-2016 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.30.70.1450 390 437 1.8E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02080 TrkA-C domain 390 451 3.1E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02080 TrkA-C domain 156 225 5.9E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.40.50.720 1 152 3.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.40.50.720 233 376 4.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF51735 1 152 2.15E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF116726 390 440 1.44E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF116726 148 226 2.75E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02254 TrkA-N domain 235 350 8.8E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02254 TrkA-N domain 3 124 1.2E-29 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789 416 438 2.7E-86 T 22-04-2016 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789 1 170 2.7E-86 T 22-04-2016 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF51735 232 376 5.43E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789:SF225 416 438 2.7E-86 T 22-04-2016 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789:SF225 1 170 2.7E-86 T 22-04-2016 YPTB_RS19865 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.30.70.1450 153 226 1.9E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS06295 2163c2911bafea27e8e92a610d5e9ada 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 31.46 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE YPTB_RS06295 2163c2911bafea27e8e92a610d5e9ada 113 PANTHER PTHR37482 1 113 5.1E-56 T 22-04-2016 YPTB_RS06295 2163c2911bafea27e8e92a610d5e9ada 113 PANTHER PTHR37482:SF1 1 113 5.1E-56 T 22-04-2016 YPTB_RS06295 2163c2911bafea27e8e92a610d5e9ada 113 Pfam PF04355 SmpA / OmlA family 35 104 1.3E-25 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 YPTB_RS11265 c29f15af062b295e76bd34fb09b5b61f 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.1E-67 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 YPTB_RS11265 c29f15af062b295e76bd34fb09b5b61f 232 Gene3D G3DSA:3.30.420.40 4 134 2.6E-44 T 22-04-2016 YPTB_RS11265 c29f15af062b295e76bd34fb09b5b61f 232 SUPERFAMILY SSF53067 5 107 3.88E-30 T 22-04-2016 YPTB_RS11265 c29f15af062b295e76bd34fb09b5b61f 232 PANTHER PTHR11735:SF11 1 140 1.0E-62 T 22-04-2016 YPTB_RS11265 c29f15af062b295e76bd34fb09b5b61f 232 PANTHER PTHR11735 1 140 1.0E-62 T 22-04-2016 YPTB_RS11265 c29f15af062b295e76bd34fb09b5b61f 232 Pfam PF00814 Glycoprotease family 30 133 1.5E-28 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPTB_RS11265 c29f15af062b295e76bd34fb09b5b61f 232 SUPERFAMILY SSF53067 110 219 2.33E-28 T 22-04-2016 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600:SF23 150 207 1.4E-99 T 22-04-2016 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600:SF23 1 132 1.4E-99 T 22-04-2016 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 Pfam PF00849 RNA pseudouridylate synthase 60 176 7.6E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600 150 207 1.4E-99 T 22-04-2016 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600 1 132 1.4E-99 T 22-04-2016 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 6.8E-58 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS13210 5de091998967c2c12b1c63b0fa04fdb5 208 SUPERFAMILY SSF55120 29 206 1.6E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 SUPERFAMILY SSF52440 1 113 3.74E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 SMART SM00878 336 441 3.2E-65 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 Gene3D G3DSA:3.40.50.20 1 129 3.6E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 Gene3D G3DSA:3.30.470.20 204 444 1.3E-99 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 SUPERFAMILY SSF56059 83 347 5.05E-69 T 22-04-2016 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.2E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 Gene3D G3DSA:3.30.1490.20 130 203 2.4E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 9.0E-85 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 SUPERFAMILY SSF51246 331 444 1.31E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 4.2E-249 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 YPTB_RS19315 20e0a350306575ae2db63151ff35eccd 449 PANTHER PTHR18866 1 442 0.0 T 22-04-2016 YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 Gene3D G3DSA:3.40.50.300 1 229 2.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 Pfam PF00005 ABC transporter 17 161 1.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 PANTHER PTHR24220 3 232 6.1E-138 T 22-04-2016 YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 SUPERFAMILY SSF52540 2 230 5.01E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 PANTHER PTHR24220:SF568 3 232 6.1E-138 T 22-04-2016 YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 SMART SM00382 26 212 1.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS01365 36b02e9f0f4548796be4b86fb5a603c6 233 PIRSF PIRSF039137 1 233 6.1E-102 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 YPTB_RS15905 49d05a4f10de9312d27b4549ed70c4bf 228 PIRSF PIRSF009467 2 228 4.1E-60 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YPTB_RS15905 49d05a4f10de9312d27b4549ed70c4bf 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 228 22.141 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YPTB_RS15905 49d05a4f10de9312d27b4549ed70c4bf 228 Pfam PF01730 UreF 37 185 7.6E-23 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YPTB_RS15905 49d05a4f10de9312d27b4549ed70c4bf 228 PANTHER PTHR33620 1 228 1.1E-55 T 22-04-2016 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF53633 1 297 1.06E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 3.9E-28 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF51735 464 636 1.89E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.9E-143 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.30.360.10 636 791 1.4E-57 T 22-04-2016 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF13840 ACT domain 395 453 6.6E-8 T 22-04-2016 IPR027795 GATS-like ACT domain YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF01842 ACT domain 324 375 4.0E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF55021 383 476 3.49E-22 T 22-04-2016 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF55347 614 797 2.55E-53 T 22-04-2016 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.1E-50 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.40.1160.10 111 298 4.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.40.1160.10 1 49 4.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 PANTHER PTHR21499:SF1 1 471 2.5E-190 T 22-04-2016 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 PANTHER PTHR21499 1 471 2.5E-190 T 22-04-2016 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.40.50.720 464 635 1.2E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF55021 303 381 5.95E-23 T 22-04-2016 YPTB_RS03395 bc415912e13843f5d6778549a7ea7ce7 819 PIRSF PIRSF000727 1 817 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 YPTB_RS17130 2238d40757e53a436a0db9bc9a7f7d55 404 PANTHER PTHR30629:SF3 1 393 4.2E-198 T 22-04-2016 YPTB_RS17130 2238d40757e53a436a0db9bc9a7f7d55 404 Gene3D G3DSA:1.10.443.10 207 375 4.5E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS17130 2238d40757e53a436a0db9bc9a7f7d55 404 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 1.4E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPTB_RS17130 2238d40757e53a436a0db9bc9a7f7d55 404 PANTHER PTHR30629 1 393 4.2E-198 T 22-04-2016 YPTB_RS17130 2238d40757e53a436a0db9bc9a7f7d55 404 SUPERFAMILY SSF56349 98 380 2.24E-66 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS17130 2238d40757e53a436a0db9bc9a7f7d55 404 Pfam PF00589 Phage integrase family 207 370 4.9E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS17130 2238d40757e53a436a0db9bc9a7f7d55 404 Gene3D G3DSA:1.10.150.130 98 192 1.3E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 PANTHER PTHR11070:SF19 1 664 0.0 T 22-04-2016 YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 SUPERFAMILY SSF52540 2 639 8.59E-161 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.4E-74 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:1.10.486.10 383 525 7.8E-38 T 22-04-2016 YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.972 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 182 279 2.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 2 104 2.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 PANTHER PTHR11070 1 664 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.2E-70 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 280 382 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 550 640 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00995 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:1.10.10.160 108 181 7.3E-23 T 22-04-2016 IPR013986 DExx box DNA helicase domain YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 Gene3D G3DSA:3.20.140.10 4 395 8.1E-147 T 22-04-2016 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 PIRSF PIRSF000484 1 382 1.0E-57 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 SUPERFAMILY SSF54675 3 138 1.21E-41 T 22-04-2016 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.606 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 SUPERFAMILY SSF51690 120 392 1.16E-85 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 9.6E-164 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 PANTHER PTHR11098:SF14 1 397 0.0 T 22-04-2016 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 9.7E-81 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPTB_RS07930 fe31bc454ace85e5481ec35d159c0863 401 PANTHER PTHR11098 1 397 0.0 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPTB_RS09135 f4a013b61412932bb495dfed5dc0f72b 169 Pfam PF00210 Ferritin-like domain 8 143 8.4E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YPTB_RS09135 f4a013b61412932bb495dfed5dc0f72b 169 PANTHER PTHR11431:SF4 4 164 1.4E-46 T 22-04-2016 YPTB_RS09135 f4a013b61412932bb495dfed5dc0f72b 169 Gene3D G3DSA:1.20.1260.10 1 161 1.6E-60 T 22-04-2016 IPR012347 Ferritin-related YPTB_RS09135 f4a013b61412932bb495dfed5dc0f72b 169 SUPERFAMILY SSF47240 1 159 5.63E-57 T 22-04-2016 IPR009078 Ferritin-like superfamily YPTB_RS09135 f4a013b61412932bb495dfed5dc0f72b 169 PANTHER PTHR11431 4 164 1.4E-46 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS07315 0fe6fa8d5a86bc20197d9b30512bc847 498 Gene3D G3DSA:3.40.309.10 276 465 2.1E-58 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS07315 0fe6fa8d5a86bc20197d9b30512bc847 498 Gene3D G3DSA:3.40.605.10 21 275 2.9E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS07315 0fe6fa8d5a86bc20197d9b30512bc847 498 PANTHER PTHR11699 1 498 5.1E-222 T 22-04-2016 YPTB_RS07315 0fe6fa8d5a86bc20197d9b30512bc847 498 Pfam PF00171 Aldehyde dehydrogenase family 30 490 8.0E-161 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS07315 0fe6fa8d5a86bc20197d9b30512bc847 498 SUPERFAMILY SSF53720 15 490 8.77E-158 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS07315 0fe6fa8d5a86bc20197d9b30512bc847 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS07315 0fe6fa8d5a86bc20197d9b30512bc847 498 PANTHER PTHR11699:SF49 1 498 5.1E-222 T 22-04-2016 YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 PANTHER PTHR30472 249 665 5.0E-208 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 SUPERFAMILY SSF81345 10 330 1.22E-59 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 Gene3D G3DSA:1.10.3470.10 15 331 4.9E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 Gene3D G3DSA:1.10.3470.10 349 664 1.5E-80 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 SUPERFAMILY SSF81345 349 662 1.7E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 Pfam PF01032 FecCD transport family 366 662 8.6E-72 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 Pfam PF01032 FecCD transport family 19 328 1.4E-66 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS04130 c10d0addd4de96080e1056cf35dfecef 665 PANTHER PTHR30472:SF16 249 665 5.0E-208 T 22-04-2016 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 Pfam PF16031 TonB N-terminal region 36 167 5.5E-24 T 22-04-2016 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 171 241 3.5E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 SUPERFAMILY SSF74653 166 233 1.22E-18 T 22-04-2016 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 Gene3D G3DSA:3.30.1150.10 168 244 1.1E-8 T 22-04-2016 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 170 231 5.5E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 105 115 7.3E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 205 222 7.3E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 186 204 7.3E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 165 186 7.3E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 PANTHER PTHR33446:SF1 11 248 1.1E-65 T 22-04-2016 YPTB_RS11580 6092b05b5e27ba44e89cbf41672bfa38 248 PANTHER PTHR33446 11 248 1.1E-65 T 22-04-2016 YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 73 1.5E-24 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 Gene3D G3DSA:3.40.50.10490 100 266 6.1E-32 T 22-04-2016 YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 PANTHER PTHR30514 1 275 1.5E-190 T 22-04-2016 YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 SUPERFAMILY SSF46689 1 72 4.12E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 PANTHER PTHR30514:SF5 1 275 1.5E-190 T 22-04-2016 YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 Gene3D G3DSA:1.10.10.10 1 74 4.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 Pfam PF01380 SIS domain 125 254 6.2E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS15590 3390b09536e72be2cc62b31bfc5c7d4a 279 SUPERFAMILY SSF53697 94 276 5.09E-34 T 22-04-2016 YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 PANTHER PTHR10566 1 458 0.0 T 22-04-2016 YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 Pfam PF03109 ABC1 family 113 231 4.2E-34 T 22-04-2016 IPR004147 UbiB domain YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.0E-178 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 Gene3D G3DSA:3.90.1200.10 251 296 8.6E-4 T 22-04-2016 YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 PANTHER PTHR10566:SF79 1 458 0.0 T 22-04-2016 YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.256 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 SUPERFAMILY SSF56112 94 158 1.59E-45 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 SUPERFAMILY SSF56112 193 435 1.59E-45 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 Gene3D G3DSA:3.30.200.20 192 227 5.3E-4 T 22-04-2016 YPTB_RS01500 a3d6826e5d0a2a10827181b175a7d273 543 Gene3D G3DSA:3.30.200.20 128 156 5.3E-4 T 22-04-2016 YPTB_RS07015 505afeecd78dd91db52c5cd8a21408ad 80 Pfam PF06183 DinI-like family 17 76 1.6E-21 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPTB_RS07015 505afeecd78dd91db52c5cd8a21408ad 80 PANTHER PTHR36572 2 79 8.9E-48 T 22-04-2016 YPTB_RS07015 505afeecd78dd91db52c5cd8a21408ad 80 PANTHER PTHR36572:SF1 2 79 8.9E-48 T 22-04-2016 YPTB_RS07015 505afeecd78dd91db52c5cd8a21408ad 80 Gene3D G3DSA:3.30.910.10 1 78 5.1E-24 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPTB_RS07015 505afeecd78dd91db52c5cd8a21408ad 80 SUPERFAMILY SSF54857 1 78 1.28E-23 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPTB_RS02155 b9bd905c07c6f452623aecbbf850cabe 169 PANTHER PTHR33202 1 169 5.6E-97 T 22-04-2016 YPTB_RS02155 b9bd905c07c6f452623aecbbf850cabe 169 PANTHER PTHR33202:SF6 1 169 5.6E-97 T 22-04-2016 YPTB_RS02155 b9bd905c07c6f452623aecbbf850cabe 169 Gene3D G3DSA:1.10.10.10 12 84 5.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02155 b9bd905c07c6f452623aecbbf850cabe 169 Pfam PF01475 Ferric uptake regulator family 20 138 2.5E-13 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YPTB_RS02155 b9bd905c07c6f452623aecbbf850cabe 169 SUPERFAMILY SSF46785 12 144 3.37E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 58 113 1.0E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 SMART SM00926 54 114 2.9E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 SUPERFAMILY SSF50692 634 808 7.05E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:2.40.40.20 663 808 3.5E-50 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:2.20.25.90 52 118 2.9E-13 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 SUPERFAMILY SSF53706 57 690 1.96E-155 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Pfam PF00384 Molybdopterin oxidoreductase 117 567 5.9E-77 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:3.40.228.10 198 403 1.2E-63 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 PANTHER PTHR11615 3 312 1.7E-303 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 PANTHER PTHR11615 344 808 1.7E-303 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 42 2.5E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 12 808 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:3.40.50.740 404 647 2.4E-65 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:3.40.50.740 119 197 2.4E-65 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 Pfam PF01568 Molydopterin dinucleotide binding domain 689 800 2.5E-28 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 725 752 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 PANTHER PTHR11615:SF128 3 312 1.7E-303 T 22-04-2016 YPTB_RS14560 df958b0d8e0281c1b9ab54e0d32367ad 808 PANTHER PTHR11615:SF128 344 808 1.7E-303 T 22-04-2016 YPTB_RS19655 cac6bdd5025dee3978d7e31106890353 606 PIRSF PIRSF028304 1 606 7.6E-184 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS19655 cac6bdd5025dee3978d7e31106890353 606 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 606 9.7E-208 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS19655 cac6bdd5025dee3978d7e31106890353 606 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 605 1.1E-193 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS19655 cac6bdd5025dee3978d7e31106890353 606 PANTHER PTHR35370:SF4 1 606 2.4E-207 T 22-04-2016 YPTB_RS19655 cac6bdd5025dee3978d7e31106890353 606 PANTHER PTHR35370 1 606 2.4E-207 T 22-04-2016 YPTB_RS08525 c5a933213b11189272ebe3db38075353 296 PANTHER PTHR22572:SF118 5 293 8.4E-148 T 22-04-2016 YPTB_RS08525 c5a933213b11189272ebe3db38075353 296 SUPERFAMILY SSF53448 1 284 5.63E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS08525 c5a933213b11189272ebe3db38075353 296 Gene3D G3DSA:3.90.550.10 4 276 2.9E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS08525 c5a933213b11189272ebe3db38075353 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 272 3.8E-114 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YPTB_RS08525 c5a933213b11189272ebe3db38075353 296 Pfam PF00483 Nucleotidyl transferase 5 272 2.7E-24 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPTB_RS08525 c5a933213b11189272ebe3db38075353 296 PANTHER PTHR22572 5 293 8.4E-148 T 22-04-2016 YPTB_RS15485 be258cdb15d52372acb4b84ecfa96505 340 Pfam PF03824 High-affinity nickel-transport protein 75 326 8.4E-42 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YPTB_RS15485 be258cdb15d52372acb4b84ecfa96505 340 PANTHER PTHR40659 5 339 2.5E-99 T 22-04-2016 YPTB_RS15960 aebc2c067d0ea0d3e7e16284660eed32 112 Pfam PF04899 MbeD/MobD like 3 61 1.2E-7 T 22-04-2016 IPR006983 MbeD/MobD-like YPTB_RS00295 9a18da1ea7b435cb298fe15293a826a8 205 Pfam PF03458 UPF0126 domain 91 164 7.0E-21 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPTB_RS00295 9a18da1ea7b435cb298fe15293a826a8 205 Pfam PF03458 UPF0126 domain 5 79 4.7E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPTB_RS00295 9a18da1ea7b435cb298fe15293a826a8 205 PANTHER PTHR30506 1 205 1.1E-139 T 22-04-2016 YPTB_RS00295 9a18da1ea7b435cb298fe15293a826a8 205 PANTHER PTHR30506:SF2 1 205 1.1E-139 T 22-04-2016 YPTB_RS15500 3eee4759c039185463fc81ba288edc3f 385 Pfam PF12832 MFS_1 like family 8 360 3.8E-50 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain YPTB_RS15500 3eee4759c039185463fc81ba288edc3f 385 PANTHER PTHR23522:SF3 1 383 8.3E-154 T 22-04-2016 YPTB_RS15500 3eee4759c039185463fc81ba288edc3f 385 SUPERFAMILY SSF103473 7 372 5.62E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS15500 3eee4759c039185463fc81ba288edc3f 385 Gene3D G3DSA:1.20.1250.20 199 372 1.1E-23 T 22-04-2016 YPTB_RS15500 3eee4759c039185463fc81ba288edc3f 385 Gene3D G3DSA:1.20.1250.20 8 178 1.7E-11 T 22-04-2016 YPTB_RS15500 3eee4759c039185463fc81ba288edc3f 385 PANTHER PTHR23522 1 383 8.3E-154 T 22-04-2016 YPTB_RS15500 3eee4759c039185463fc81ba288edc3f 385 PIRSF PIRSF004925 1 384 2.9E-111 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter YPTB_RS14435 21cb8aca0e0885cc009500b2a0f7967b 161 PANTHER PTHR36152:SF1 1 161 9.5E-92 T 22-04-2016 YPTB_RS14435 21cb8aca0e0885cc009500b2a0f7967b 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 145 2.8E-20 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS14435 21cb8aca0e0885cc009500b2a0f7967b 161 Gene3D G3DSA:2.30.110.20 1 159 1.9E-62 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS14435 21cb8aca0e0885cc009500b2a0f7967b 161 SUPERFAMILY SSF141452 2 159 9.02E-52 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS14435 21cb8aca0e0885cc009500b2a0f7967b 161 PANTHER PTHR36152 1 161 9.5E-92 T 22-04-2016 YPTB_RS14435 21cb8aca0e0885cc009500b2a0f7967b 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.6E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS11500 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:1.20.5.100 209 235 4.3E-18 T 22-04-2016 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 422 1.4E-136 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:3.40.50.720 237 444 1.2E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11500 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF52413 312 437 3.27E-40 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 SMART SM00984 322 426 1.0E-52 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 PIRSF PIRSF500134 1 444 3.4E-187 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:3.40.50.720 1 208 1.0E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11500 709ea341598949e29df19ae3630def04 448 PANTHER PTHR11374 1 446 7.0E-261 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 PANTHER PTHR11374:SF18 1 446 7.0E-261 T 22-04-2016 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 2.5E-38 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF48179 205 302 1.43E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 3.1E-63 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 426 1.2E-31 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPTB_RS11500 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF51735 1 197 5.26E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11500 709ea341598949e29df19ae3630def04 448 PIRSF PIRSF000124 1 441 2.7E-146 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 PANTHER PTHR21600:SF2 28 337 9.5E-110 T 22-04-2016 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 99 259 5.1E-63 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 SMART SM00363 29 100 6.4E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 PANTHER PTHR21600 28 337 9.5E-110 T 22-04-2016 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 133 147 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 SUPERFAMILY SSF55120 95 259 5.55E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 Gene3D G3DSA:3.10.290.10 29 88 5.9E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 Pfam PF00849 RNA pseudouridylate synthase 95 225 3.1E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 Pfam PF01479 S4 domain 30 70 3.3E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS11670 3589059901eb6918978f9c40ba80220e 344 SUPERFAMILY SSF55174 31 124 2.21E-13 T 22-04-2016 YPTB_RS07645 c783ed41715ac5af483d832c92442a3f 339 SUPERFAMILY SSF53383 3 335 7.26E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS07645 c783ed41715ac5af483d832c92442a3f 339 PANTHER PTHR10289 3 336 9.6E-160 T 22-04-2016 YPTB_RS07645 c783ed41715ac5af483d832c92442a3f 339 Pfam PF01212 Beta-eliminating lyase 4 284 1.9E-95 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 YPTB_RS07645 c783ed41715ac5af483d832c92442a3f 339 PIRSF PIRSF017617 1 339 2.9E-130 T 22-04-2016 IPR023603 Threonine aldolase YPTB_RS07645 c783ed41715ac5af483d832c92442a3f 339 Gene3D G3DSA:3.90.1150.10 247 336 2.9E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS07645 c783ed41715ac5af483d832c92442a3f 339 PANTHER PTHR10289:SF5 3 336 9.6E-160 T 22-04-2016 YPTB_RS07645 c783ed41715ac5af483d832c92442a3f 339 Gene3D G3DSA:3.40.640.10 2 246 6.4E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.222 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 Gene3D G3DSA:3.90.650.10 171 344 1.0E-68 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 7.4E-153 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 1.7E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 SUPERFAMILY SSF56042 171 342 2.24E-63 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 SUPERFAMILY SSF55326 7 170 4.19E-53 T 22-04-2016 YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 2.5E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 Gene3D G3DSA:3.30.1330.10 22 170 5.8E-64 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS15135 a04e4b1db67b96045ed88b4defb1743d 347 PANTHER PTHR10520 4 346 4.8E-230 T 22-04-2016 YPTB_RS03820 ae08b8903dfa75169799b847bc7ab2df 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 7.2E-28 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YPTB_RS03820 ae08b8903dfa75169799b847bc7ab2df 105 PANTHER PTHR37479 1 105 7.7E-40 T 22-04-2016 YPTB_RS03820 ae08b8903dfa75169799b847bc7ab2df 105 PANTHER PTHR37479:SF1 1 105 7.7E-40 T 22-04-2016 YPTB_RS03820 ae08b8903dfa75169799b847bc7ab2df 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.785 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YPTB_RS03820 ae08b8903dfa75169799b847bc7ab2df 105 Pfam PF04999 Cell division protein FtsL 11 104 4.9E-34 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YPTB_RS12275 e900927b0ef32eda8261b17e6dfcbda9 219 PANTHER PTHR33778 1 147 1.1E-62 T 22-04-2016 YPTB_RS12275 e900927b0ef32eda8261b17e6dfcbda9 219 Pfam PF02308 MgtC family 10 138 2.7E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS12275 e900927b0ef32eda8261b17e6dfcbda9 219 PRINTS PR01837 MgtC/SapB protein signature 31 49 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS12275 e900927b0ef32eda8261b17e6dfcbda9 219 PRINTS PR01837 MgtC/SapB protein signature 92 116 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS12275 e900927b0ef32eda8261b17e6dfcbda9 219 PRINTS PR01837 MgtC/SapB protein signature 12 31 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS12275 e900927b0ef32eda8261b17e6dfcbda9 219 PRINTS PR01837 MgtC/SapB protein signature 65 87 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 Gene3D G3DSA:3.40.50.10490 450 609 7.9E-68 T 22-04-2016 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 Pfam PF01380 SIS domain 289 417 2.0E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 Pfam PF01380 SIS domain 462 591 5.7E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 Gene3D G3DSA:3.40.50.10490 245 449 5.5E-64 T 22-04-2016 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 Pfam PF13522 Glutamine amidotransferase domain 65 184 3.6E-21 T 22-04-2016 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 SUPERFAMILY SSF56235 2 233 7.98E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 Gene3D G3DSA:3.60.20.10 2 239 2.0E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.997 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.6E-263 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YPTB_RS21395 ec118a2f9e3574a13bbab437992e5549 609 SUPERFAMILY SSF53697 245 609 9.39E-113 T 22-04-2016 YPTB_RS03955 c331f60ac015f135ed242ccf9423ac94 512 PANTHER PTHR30258:SF1 19 512 7.6E-221 T 22-04-2016 YPTB_RS03955 c331f60ac015f135ed242ccf9423ac94 512 Gene3D G3DSA:3.30.450.90 109 234 4.9E-48 T 22-04-2016 YPTB_RS03955 c331f60ac015f135ed242ccf9423ac94 512 Pfam PF00437 Type II/IV secretion system protein 140 400 7.3E-81 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPTB_RS03955 c331f60ac015f135ed242ccf9423ac94 512 PANTHER PTHR30258 19 512 7.6E-221 T 22-04-2016 YPTB_RS03955 c331f60ac015f135ed242ccf9423ac94 512 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 328 342 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPTB_RS03955 c331f60ac015f135ed242ccf9423ac94 512 Gene3D G3DSA:3.40.50.300 239 503 1.3E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03955 c331f60ac015f135ed242ccf9423ac94 512 SUPERFAMILY SSF52540 110 502 2.45E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 34.31 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 Gene3D G3DSA:1.10.10.350 363 462 7.3E-31 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 SUPERFAMILY SSF52374 3 298 2.33E-113 T 22-04-2016 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 4.4E-201 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.9E-116 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 Gene3D G3DSA:3.90.800.10 68 180 2.1E-39 T 22-04-2016 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 Gene3D G3DSA:3.40.50.620 181 230 4.8E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 Gene3D G3DSA:3.40.50.620 2 67 4.8E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 Gene3D G3DSA:1.10.1160.10 233 314 3.1E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 PANTHER PTHR11451 1 319 2.4E-103 T 22-04-2016 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.1E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 3.1E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.1E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 3.1E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.1E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPTB_RS14675 f658352f2ae691ade69c66af916ca3de 471 SUPERFAMILY SSF48163 299 461 5.89E-44 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPTB_RS12645 3491a9fe4a1d6d827de8fbe40d9db6cf 273 PANTHER PTHR31756 1 273 4.6E-131 T 22-04-2016 YPTB_RS12645 3491a9fe4a1d6d827de8fbe40d9db6cf 273 SUPERFAMILY SSF47454 173 230 6.28E-5 T 22-04-2016 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 YPTB_RS12645 3491a9fe4a1d6d827de8fbe40d9db6cf 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 2.1E-73 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 YPTB_RS12645 3491a9fe4a1d6d827de8fbe40d9db6cf 273 PANTHER PTHR31756:SF3 1 273 4.6E-131 T 22-04-2016 YPTB_RS12645 3491a9fe4a1d6d827de8fbe40d9db6cf 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.599 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 7.8E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 PANTHER PTHR10744 4 82 1.9E-43 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 SUPERFAMILY SSF50249 5 82 2.7E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.173 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 Gene3D G3DSA:2.40.50.140 6 82 2.0E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19970 4607bef6f01d5b77e0d11f76a7676fcb 84 Pfam PF00366 Ribosomal protein S17 10 76 1.7E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 194 1.6E-5 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 Gene3D G3DSA:3.40.30.10 1 82 1.9E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 SUPERFAMILY SSF52833 1 83 3.77E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 SUPERFAMILY SSF47616 72 202 4.46E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 PANTHER PTHR11260:SF157 1 203 4.6E-90 T 22-04-2016 YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 PANTHER PTHR11260 1 203 4.6E-90 T 22-04-2016 YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 Gene3D G3DSA:1.20.1050.10 83 203 1.3E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS07430 ef8a3111e7f5fac1f5a27c69a492ed33 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 1.1E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPTB_RS10670 1f66e2e2a343c196bb4f8e82a2c3df35 237 Pfam PF00005 ABC transporter 33 178 2.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS10670 1f66e2e2a343c196bb4f8e82a2c3df35 237 PANTHER PTHR24220 19 226 9.5E-115 T 22-04-2016 YPTB_RS10670 1f66e2e2a343c196bb4f8e82a2c3df35 237 Gene3D G3DSA:3.40.50.300 16 230 1.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10670 1f66e2e2a343c196bb4f8e82a2c3df35 237 PANTHER PTHR24220:SF433 19 226 9.5E-115 T 22-04-2016 YPTB_RS10670 1f66e2e2a343c196bb4f8e82a2c3df35 237 SUPERFAMILY SSF52540 17 233 3.79E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10670 1f66e2e2a343c196bb4f8e82a2c3df35 237 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS10670 1f66e2e2a343c196bb4f8e82a2c3df35 237 SMART SM00382 42 226 2.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS02280 93ea560bc63585b895ee6eca404dd2d5 191 PANTHER PTHR30055 3 191 1.4E-36 T 22-04-2016 YPTB_RS02280 93ea560bc63585b895ee6eca404dd2d5 191 SUPERFAMILY SSF48498 74 157 6.67E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPTB_RS02280 93ea560bc63585b895ee6eca404dd2d5 191 SUPERFAMILY SSF46689 3 66 8.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02280 93ea560bc63585b895ee6eca404dd2d5 191 PANTHER PTHR30055:SF92 3 191 1.4E-36 T 22-04-2016 YPTB_RS02280 93ea560bc63585b895ee6eca404dd2d5 191 Gene3D G3DSA:1.10.357.10 3 180 2.1E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS02280 93ea560bc63585b895ee6eca404dd2d5 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 2.9E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 Pfam PF13932 GidA associated domain 403 616 2.2E-70 T 22-04-2016 IPR026904 GidA associated domain 3 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 SUPERFAMILY SSF51905 97 261 6.06E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 SUPERFAMILY SSF51905 6 66 6.06E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.7E-294 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.5E-168 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 SMART SM01228 546 617 2.8E-44 T 22-04-2016 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 Gene3D G3DSA:3.50.50.60 6 235 7.2E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 PANTHER PTHR11806 1 629 0.0 T 22-04-2016 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 PANTHER PTHR11806:SF0 1 629 0.0 T 22-04-2016 YPTB_RS21455 a6f4f1782e65c5229c883cd2b0257fde 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.617 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 Gene3D G3DSA:2.60.410.10 286 377 1.4E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 1.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 SUPERFAMILY SSF69189 286 379 2.55E-24 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 Gene3D G3DSA:3.40.710.10 33 285 1.5E-96 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 266 1.2E-97 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 PANTHER PTHR21581:SF4 1 401 0.0 T 22-04-2016 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 PANTHER PTHR21581 1 401 0.0 T 22-04-2016 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 377 2.0E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 SUPERFAMILY SSF56601 9 286 3.84E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS07465 182eb5e59691c82a51b54380f68f76d9 401 SMART SM00936 286 377 6.2E-31 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS14160 968cf8e4153a4923bc268c6401208cc7 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 1.3E-71 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 YPTB_RS14160 968cf8e4153a4923bc268c6401208cc7 190 SUPERFAMILY SSF52507 2 187 4.71E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPTB_RS14160 968cf8e4153a4923bc268c6401208cc7 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.521 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 YPTB_RS14160 968cf8e4153a4923bc268c6401208cc7 190 Gene3D G3DSA:3.40.50.1950 2 189 3.6E-77 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPTB_RS14160 968cf8e4153a4923bc268c6401208cc7 190 Pfam PF02441 Flavoprotein 2 127 1.3E-25 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPTB_RS14160 968cf8e4153a4923bc268c6401208cc7 190 PANTHER PTHR30108 2 188 5.3E-127 T 22-04-2016 YPTB_RS14160 968cf8e4153a4923bc268c6401208cc7 190 PANTHER PTHR30108:SF10 2 188 5.3E-127 T 22-04-2016 YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 SUPERFAMILY SSF53223 4 102 2.24E-31 T 22-04-2016 YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 3.2E-96 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 PANTHER PTHR21089 3 273 4.0E-161 T 22-04-2016 YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 SUPERFAMILY SSF51735 103 269 6.27E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 PANTHER PTHR21089:SF2 3 273 4.0E-161 T 22-04-2016 YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 191 1.0E-10 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 Gene3D G3DSA:3.40.192.10 3 108 5.3E-38 T 22-04-2016 YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 33.12 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 Gene3D G3DSA:3.40.50.720 109 245 1.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19825 7379f7332f1a3cdbaf63dff970b8d0c3 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.8E-25 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 PANTHER PTHR19370 4 227 5.2E-100 T 22-04-2016 YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 SUPERFAMILY SSF52343 104 248 2.62E-38 T 22-04-2016 YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 Gene3D G3DSA:2.40.30.10 2 96 9.2E-27 T 22-04-2016 YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 PANTHER PTHR19370:SF98 4 227 5.2E-100 T 22-04-2016 YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 Gene3D G3DSA:3.40.50.80 97 248 7.5E-47 T 22-04-2016 YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 5.4E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 3.9E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPTB_RS00520 17b0be28a137300dfb515938c0db90db 248 SUPERFAMILY SSF63380 3 99 8.78E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS05255 a7b80564342486ca4515e95bd5df8a47 454 Gene3D G3DSA:1.20.1250.20 211 393 1.1E-23 T 22-04-2016 YPTB_RS05255 a7b80564342486ca4515e95bd5df8a47 454 Gene3D G3DSA:1.20.1250.20 13 194 2.6E-34 T 22-04-2016 YPTB_RS05255 a7b80564342486ca4515e95bd5df8a47 454 Gene3D G3DSA:3.30.70.100 410 454 8.3E-4 T 22-04-2016 YPTB_RS05255 a7b80564342486ca4515e95bd5df8a47 454 PANTHER PTHR23510:SF6 1 400 3.7E-272 T 22-04-2016 YPTB_RS05255 a7b80564342486ca4515e95bd5df8a47 454 SUPERFAMILY SSF103473 1 390 4.05E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS05255 a7b80564342486ca4515e95bd5df8a47 454 Pfam PF07690 Major Facilitator Superfamily 20 346 1.1E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS05255 a7b80564342486ca4515e95bd5df8a47 454 PANTHER PTHR23510 1 400 3.7E-272 T 22-04-2016 YPTB_RS19485 6609289849be6f00352eee7fe4209a1e 264 PANTHER PTHR30151:SF22 6 263 5.5E-203 T 22-04-2016 YPTB_RS19485 6609289849be6f00352eee7fe4209a1e 264 Gene3D G3DSA:1.10.3720.10 54 249 1.2E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19485 6609289849be6f00352eee7fe4209a1e 264 PANTHER PTHR30151 6 263 5.5E-203 T 22-04-2016 YPTB_RS19485 6609289849be6f00352eee7fe4209a1e 264 SUPERFAMILY SSF161098 56 237 2.09E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19485 6609289849be6f00352eee7fe4209a1e 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 1.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 Gene3D G3DSA:3.20.20.360 72 412 5.9E-125 T 22-04-2016 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 Gene3D G3DSA:1.20.1220.12 413 525 8.2E-38 T 22-04-2016 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 Pfam PF01274 Malate synthase 12 531 4.2E-204 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 PANTHER PTHR21631 1 531 1.3E-275 T 22-04-2016 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 3.7E-251 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 SUPERFAMILY SSF51645 11 531 1.01E-187 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 PIRSF PIRSF001363 2 532 6.6E-249 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPTB_RS19770 b2751ac14745a9cb8d7cccac48be9d92 532 PANTHER PTHR21631:SF1 1 531 1.3E-275 T 22-04-2016 YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 Gene3D G3DSA:1.20.1080.10 29 280 8.6E-89 T 22-04-2016 IPR023271 Aquaporin-like YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 Pfam PF01226 Formate/nitrite transporter 15 276 7.1E-76 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520 12 228 4.4E-103 T 22-04-2016 YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520 245 281 4.4E-103 T 22-04-2016 YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.7E-129 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 1.0E-92 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520:SF4 12 228 4.4E-103 T 22-04-2016 YPTB_RS07780 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520:SF4 245 281 4.4E-103 T 22-04-2016 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.8E-93 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 SUPERFAMILY SSF51713 2 364 2.88E-163 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 3.3E-190 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 Gene3D G3DSA:3.20.20.105 1 366 6.1E-170 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.321 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 PANTHER PTHR21148:SF26 1 364 3.6E-185 T 22-04-2016 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 1.4E-179 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05155 a3edcc49e3e08b50ac38c673e0da7702 374 PANTHER PTHR21148 1 364 3.6E-185 T 22-04-2016 YPTB_RS19075 b9c86a4a92e9ad0cf76b8e2063aa070c 181 PANTHER PTHR36504 1 181 2.5E-55 T 22-04-2016 YPTB_RS19075 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Pfam PF03968 OstA-like protein 35 146 3.6E-28 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal YPTB_RS19075 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 165 25.31 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YPTB_RS19075 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Gene3D G3DSA:2.60.450.10 26 161 7.9E-39 T 22-04-2016 YPTB_RS19075 b9c86a4a92e9ad0cf76b8e2063aa070c 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 164 7.6E-48 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YPTB_RS08160 6043bd77483a12f9f36a27c2042c5fc6 82 SUPERFAMILY SSF47336 1 78 2.75E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08160 6043bd77483a12f9f36a27c2042c5fc6 82 Pfam PF00550 Phosphopantetheine attachment site 14 74 3.8E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS08160 6043bd77483a12f9f36a27c2042c5fc6 82 Gene3D G3DSA:1.10.1200.10 1 75 4.4E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 SMART SM00382 26 223 6.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 SMART SM00382 337 506 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 SUPERFAMILY SSF52540 119 255 3.31E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 SUPERFAMILY SSF52540 2 92 3.31E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 Pfam PF00005 ABC transporter 328 459 2.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 Pfam PF00005 ABC transporter 17 178 4.5E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 SUPERFAMILY SSF52540 294 517 7.96E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 Pfam PF12848 ABC transporter 217 296 1.2E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 PANTHER PTHR19211:SF49 1 555 0.0 T 22-04-2016 YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 Gene3D G3DSA:3.40.50.300 311 532 6.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20105 1f8bdf9952098fc4a1c342d86194dff8 640 Gene3D G3DSA:3.40.50.300 1 265 1.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19495 bc9fd1745013238ba861e30636b81b31 368 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 45 324 3.0E-83 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 YPTB_RS19495 bc9fd1745013238ba861e30636b81b31 368 SUPERFAMILY SSF53850 41 275 4.91E-48 T 22-04-2016 YPTB_RS19495 bc9fd1745013238ba861e30636b81b31 368 PANTHER PTHR30024 4 325 1.0E-169 T 22-04-2016 YPTB_RS19495 bc9fd1745013238ba861e30636b81b31 368 Pfam PF09084 NMT1/THI5 like 82 199 9.5E-12 T 22-04-2016 IPR015168 SsuA/THI5-like YPTB_RS19495 bc9fd1745013238ba861e30636b81b31 368 SMART SM00062 43 264 1.5E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS19495 bc9fd1745013238ba861e30636b81b31 368 Gene3D G3DSA:3.40.190.10 125 222 2.4E-29 T 22-04-2016 YPTB_RS19495 bc9fd1745013238ba861e30636b81b31 368 PANTHER PTHR30024:SF11 4 325 1.0E-169 T 22-04-2016 YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 PANTHER PTHR37010:SF1 1 109 2.7E-65 T 22-04-2016 YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 Gene3D G3DSA:3.30.1420.10 1 39 7.6E-15 T 22-04-2016 YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 PANTHER PTHR37010 1 109 2.7E-65 T 22-04-2016 YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 Gene3D G3DSA:1.10.10.370 40 109 6.3E-39 T 22-04-2016 YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 SUPERFAMILY SSF69721 2 109 2.88E-42 T 22-04-2016 IPR025526 DsrC-like domain YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 4.5E-51 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 Pfam PF04358 DsrC like protein 3 109 8.7E-47 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YPTB_RS08075 f345a070c025c027d7eda26b5e1ab93c 109 PIRSF PIRSF006223 2 109 1.3E-47 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YPTB_RS09150 ec62b062abcbe2c8a285fc6e63443244 113 Pfam PF10709 Protein of unknown function (DUF2511) 25 111 3.9E-45 T 22-04-2016 IPR019648 Protein of unknown function DUF2511 YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 SUPERFAMILY SSF48179 273 482 7.48E-51 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 6.4E-28 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 4.0E-69 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 PANTHER PTHR30524:SF1 2 483 0.0 T 22-04-2016 YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 SUPERFAMILY SSF51735 2 263 2.09E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 Gene3D G3DSA:3.40.50.720 3 263 2.8E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 PANTHER PTHR30524 2 483 0.0 T 22-04-2016 YPTB_RS18820 4bfb533cb83ccd9577411f557f6cf84a 483 Gene3D G3DSA:1.10.1040.10 272 482 6.0E-68 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPTB_RS07880 3845339e0a773103043f7a435fcfdd4b 261 SUPERFAMILY SSF53335 4 255 1.37E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07880 3845339e0a773103043f7a435fcfdd4b 261 Gene3D G3DSA:3.40.50.150 5 234 4.0E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07880 3845339e0a773103043f7a435fcfdd4b 261 PANTHER PTHR10108 1 222 2.4E-46 T 22-04-2016 YPTB_RS07880 3845339e0a773103043f7a435fcfdd4b 261 PANTHER PTHR10108:SF919 1 222 2.4E-46 T 22-04-2016 YPTB_RS07880 3845339e0a773103043f7a435fcfdd4b 261 Pfam PF13847 Methyltransferase domain 46 148 5.7E-19 T 22-04-2016 IPR025714 Methyltransferase domain YPTB_RS17785 6136ebcd92185518179bdcd6c5b525b3 447 PANTHER PTHR30354 1 447 0.0 T 22-04-2016 YPTB_RS17785 6136ebcd92185518179bdcd6c5b525b3 447 PANTHER PTHR30354:SF5 1 447 0.0 T 22-04-2016 YPTB_RS17785 6136ebcd92185518179bdcd6c5b525b3 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 447 6.0E-171 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPTB_RS17785 6136ebcd92185518179bdcd6c5b525b3 447 Pfam PF02447 GntP family permease 4 445 4.9E-158 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPTB_RS17785 6136ebcd92185518179bdcd6c5b525b3 447 PIRSF PIRSF002746 1 447 1.5E-141 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPTB_RS16715 df81c25565f44ba135e90c51b337e6a7 192 Pfam PF01965 DJ-1/PfpI family 3 165 3.3E-31 T 22-04-2016 IPR002818 DJ-1/PfpI YPTB_RS16715 df81c25565f44ba135e90c51b337e6a7 192 PANTHER PTHR11019:SF88 1 190 1.3E-113 T 22-04-2016 YPTB_RS16715 df81c25565f44ba135e90c51b337e6a7 192 Gene3D G3DSA:3.40.50.880 1 172 1.6E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS16715 df81c25565f44ba135e90c51b337e6a7 192 SUPERFAMILY SSF52317 3 172 5.6E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS16715 df81c25565f44ba135e90c51b337e6a7 192 PANTHER PTHR11019 1 190 1.3E-113 T 22-04-2016 YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 Pfam PF13899 Thioredoxin-like 491 563 1.5E-12 T 22-04-2016 YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 591 41.015 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 SUPERFAMILY SSF74863 38 153 1.07E-42 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 Gene3D G3DSA:3.40.30.10 479 589 4.9E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 ProSitePatterns PS00194 Thioredoxin family active site. 499 517 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 198 403 1.7E-20 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 PANTHER PTHR32234 3 595 4.0E-264 T 22-04-2016 YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 PANTHER PTHR32234:SF0 3 595 4.0E-264 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 Gene3D G3DSA:2.60.40.1250 36 153 2.2E-47 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 SUPERFAMILY SSF52833 476 589 1.66E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS02300 68377f619e4be82c934f4e5ff21ae3f8 595 Pfam PF11412 Disulphide bond corrector protein DsbC 39 150 1.9E-36 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 Gene3D G3DSA:1.10.12.10 223 273 3.9E-31 T 22-04-2016 IPR014748 Crontonase, C-terminal YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.611 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 PANTHER PTHR11941:SF20 9 278 2.9E-197 T 22-04-2016 YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 PANTHER PTHR11941 9 278 2.9E-197 T 22-04-2016 YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 SUPERFAMILY SSF52096 19 280 9.68E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 8.4E-80 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 Gene3D G3DSA:3.90.226.10 22 222 6.6E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS13880 a5a28a09bcf7beb86a496eedcf1ae600 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 4.2E-151 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 307 65.874 T 22-04-2016 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 7.2E-96 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 SUPERFAMILY SSF161111 10 209 1.03E-62 T 22-04-2016 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 PANTHER PTHR11562 9 296 6.7E-111 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 SUPERFAMILY SSF160240 212 287 5.1E-9 T 22-04-2016 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 PANTHER PTHR11562:SF17 9 296 6.7E-111 T 22-04-2016 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 Pfam PF01545 Cation efflux family 16 208 8.2E-54 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS06460 21728afb23fe1031339b2d9a40380d83 312 Gene3D G3DSA:1.20.1510.10 12 208 3.5E-67 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YPTB_RS01565 ab68d13dfe36767fd914be7e50f42599 483 Pfam PF02386 Cation transport protein 37 477 4.8E-92 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 YPTB_RS01565 ab68d13dfe36767fd914be7e50f42599 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 4.3E-126 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 YPTB_RS01565 ab68d13dfe36767fd914be7e50f42599 483 PIRSF PIRSF006247 1 483 2.9E-182 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 YPTB_RS01565 ab68d13dfe36767fd914be7e50f42599 483 PANTHER PTHR32024 1 483 6.5E-282 T 22-04-2016 YPTB_RS01565 ab68d13dfe36767fd914be7e50f42599 483 PANTHER PTHR32024:SF2 1 483 6.5E-282 T 22-04-2016 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.1E-115 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 Gene3D G3DSA:3.20.70.20 136 344 7.9E-42 T 22-04-2016 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 Gene3D G3DSA:3.20.70.20 610 699 7.9E-42 T 22-04-2016 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 Gene3D G3DSA:3.20.70.20 398 559 7.9E-42 T 22-04-2016 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 3.4E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PANTHER PTHR11573:SF17 6 754 0.0 T 22-04-2016 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PANTHER PTHR11573 6 754 0.0 T 22-04-2016 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 9.5E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 9.5E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 9.5E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 9.5E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 9.5E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 9.5E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.1E-177 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 SUPERFAMILY SSF48168 10 221 1.83E-72 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 SUPERFAMILY SSF51998 222 741 5.49E-168 T 22-04-2016 YPTB_RS06925 9ae51202d44674ccfb450c98420ac912 762 Pfam PF03477 ATP cone domain 6 92 8.2E-16 T 22-04-2016 IPR005144 ATP-cone domain YPTB_RS04490 a83369c2e503f24b5fa07b115df996a1 127 Gene3D G3DSA:1.20.120.10 22 127 2.6E-35 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPTB_RS04490 a83369c2e503f24b5fa07b115df996a1 127 SUPERFAMILY SSF47175 22 127 1.44E-35 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPTB_RS04490 a83369c2e503f24b5fa07b115df996a1 127 PIRSF PIRSF000029 1 127 3.6E-61 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPTB_RS04490 a83369c2e503f24b5fa07b115df996a1 127 Pfam PF07361 Cytochrome b562 23 127 1.4E-27 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 Gene3D G3DSA:3.40.50.1010 307 324 5.5E-4 T 22-04-2016 IPR029060 PIN domain-like YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 Gene3D G3DSA:3.40.50.1010 163 182 5.5E-4 T 22-04-2016 IPR029060 PIN domain-like YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264:SF80 4 156 9.1E-121 T 22-04-2016 YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264:SF80 194 332 9.1E-121 T 22-04-2016 YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 Pfam PF01145 SPFH domain / Band 7 family 22 241 1.4E-34 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 PIRSF PIRSF005651 1 334 5.5E-106 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 SMART SM00244 18 225 1.1E-42 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 TIGRFAM TIGR01932 hflC: HflC protein 1 325 6.0E-138 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264 4 156 9.1E-121 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264 194 332 9.1E-121 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 SUPERFAMILY SSF117892 195 231 9.29E-8 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS02475 c408f0cbfe17e226ce1091808c0f509c 334 SUPERFAMILY SSF117892 56 156 1.44E-16 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS04380 b5af34efbaa8ed59df173ade3438fd27 254 SUPERFAMILY SSF53850 1 243 8.24E-45 T 22-04-2016 YPTB_RS04380 b5af34efbaa8ed59df173ade3438fd27 254 SMART SM00062 32 254 5.2E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS04380 b5af34efbaa8ed59df173ade3438fd27 254 PANTHER PTHR18966:SF216 8 238 1.6E-85 T 22-04-2016 YPTB_RS04380 b5af34efbaa8ed59df173ade3438fd27 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 239 4.3E-40 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS04380 b5af34efbaa8ed59df173ade3438fd27 254 Gene3D G3DSA:3.40.190.10 150 205 2.3E-5 T 22-04-2016 YPTB_RS04380 b5af34efbaa8ed59df173ade3438fd27 254 Gene3D G3DSA:3.40.190.10 13 149 9.6E-32 T 22-04-2016 YPTB_RS04380 b5af34efbaa8ed59df173ade3438fd27 254 PANTHER PTHR18966 8 238 1.6E-85 T 22-04-2016 YPTB_RS11435 0d1f4efabfc296d45e4602e98ee885f8 183 Pfam PF00881 Nitroreductase family 8 161 1.4E-21 T 22-04-2016 IPR029479 Nitroreductase YPTB_RS11435 0d1f4efabfc296d45e4602e98ee885f8 183 SUPERFAMILY SSF55469 1 177 2.62E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YPTB_RS11435 0d1f4efabfc296d45e4602e98ee885f8 183 PIRSF PIRSF000232 1 182 2.0E-62 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YPTB_RS11435 0d1f4efabfc296d45e4602e98ee885f8 183 PANTHER PTHR23026:SF107 1 174 1.8E-95 T 22-04-2016 YPTB_RS11435 0d1f4efabfc296d45e4602e98ee885f8 183 PANTHER PTHR23026 1 174 1.8E-95 T 22-04-2016 YPTB_RS11435 0d1f4efabfc296d45e4602e98ee885f8 183 Gene3D G3DSA:3.40.109.10 1 168 3.9E-39 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YPTB_RS14080 d8cb932fc38853eddc47e2018fc54b18 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.795 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 YPTB_RS14080 d8cb932fc38853eddc47e2018fc54b18 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 2.0E-58 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 YPTB_RS01880 51c5bc3333522bca0bdeb83d744cf4d8 71 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 3 71 4.2E-20 T 22-04-2016 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 YPTB_RS01880 51c5bc3333522bca0bdeb83d744cf4d8 71 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 3.1E-30 T 22-04-2016 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 YPTB_RS01880 51c5bc3333522bca0bdeb83d744cf4d8 71 SUPERFAMILY SSF140129 1 67 5.49E-17 T 22-04-2016 YPTB_RS13960 11d2ff9450d6074815c5cad73c088fe5 178 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 8.0E-65 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 YPTB_RS13960 11d2ff9450d6074815c5cad73c088fe5 178 SUPERFAMILY SSF52540 2 166 2.91E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13960 11d2ff9450d6074815c5cad73c088fe5 178 Pfam PF01202 Shikimate kinase 12 166 6.5E-11 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS13960 11d2ff9450d6074815c5cad73c088fe5 178 Gene3D G3DSA:3.40.50.300 2 167 3.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13960 11d2ff9450d6074815c5cad73c088fe5 178 PANTHER PTHR11603 1 178 6.4E-89 T 22-04-2016 YPTB_RS12085 372b716ca5fc106e42a942da646aee2b 264 SUPERFAMILY SSF54001 33 264 1.57E-80 T 22-04-2016 YPTB_RS12085 372b716ca5fc106e42a942da646aee2b 264 Gene3D G3DSA:1.10.3670.10 28 138 9.4E-43 T 22-04-2016 YPTB_RS12085 372b716ca5fc106e42a942da646aee2b 264 Pfam PF07313 Protein of unknown function (DUF1460) 59 256 1.4E-77 T 22-04-2016 IPR010846 Protein of unknown function DUF1460 YPTB_RS12085 372b716ca5fc106e42a942da646aee2b 264 Gene3D G3DSA:2.30.260.10 139 263 8.5E-34 T 22-04-2016 IPR023360 Putative xylanase-like C-terminal YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 Pfam PF00849 RNA pseudouridylate synthase 102 249 2.2E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 1.9E-92 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 Gene3D G3DSA:3.10.290.10 20 68 2.4E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 SUPERFAMILY SSF55174 19 70 2.21E-8 T 22-04-2016 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 PANTHER PTHR11079:SF84 1 317 1.3E-167 T 22-04-2016 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 SMART SM00363 20 79 2.7E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 Pfam PF01479 S4 domain 20 66 2.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 SUPERFAMILY SSF55120 95 311 1.6E-63 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS13465 8d31c9b51e2a6f1b0da43651f4e3ce51 320 PANTHER PTHR11079 1 317 1.3E-167 T 22-04-2016 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 255 6.7E-65 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 SUPERFAMILY SSF53067 259 496 5.18E-40 T 22-04-2016 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 PANTHER PTHR10196:SF73 1 494 0.0 T 22-04-2016 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 PIRSF PIRSF000538 2 498 3.7E-76 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 Gene3D G3DSA:3.30.420.40 264 495 1.0E-28 T 22-04-2016 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 PANTHER PTHR10196 1 494 0.0 T 22-04-2016 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 SUPERFAMILY SSF53067 4 255 5.53E-57 T 22-04-2016 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 266 448 1.2E-16 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS04425 ee9a173c4436afb9457b113f5c7295f7 498 Gene3D G3DSA:3.30.420.40 1 253 9.8E-58 T 22-04-2016 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PANTHER PTHR30033 1 554 6.3E-132 T 22-04-2016 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 354 2.9E-72 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PANTHER PTHR30033:SF1 1 554 6.3E-132 T 22-04-2016 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 Pfam PF00460 Flagella basal body rod protein 6 35 1.4E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 SUPERFAMILY SSF64518 100 551 4.84E-47 T 22-04-2016 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 493 551 1.0E-5 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 519 543 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 447 466 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 472 493 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS09255 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 SMART SM00636 20 299 0.0075 T 22-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 Gene3D G3DSA:2.10.10.20 425 467 4.1E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 SMART SM00060 333 407 8.6E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 Pfam PF00704 Glycosyl hydrolases family 18 22 299 1.2E-30 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 SUPERFAMILY SSF51055 424 467 9.81E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 PANTHER PTHR11177:SF45 1 326 1.5E-93 T 22-04-2016 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 ProSitePatterns PS01095 Chitinases family 18 active site. 128 136 - T 22-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 SUPERFAMILY SSF51445 18 311 7.31E-51 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 PANTHER PTHR11177 1 326 1.5E-93 T 22-04-2016 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 SUPERFAMILY SSF49265 332 417 2.89E-14 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 Gene3D G3DSA:3.20.20.80 19 312 3.4E-58 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS18185 739c3944096e669ece3f36cbea45e850 471 Gene3D G3DSA:2.60.40.10 332 417 6.3E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 SUPERFAMILY SSF47413 5 59 1.19E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 Gene3D G3DSA:3.40.50.300 231 400 1.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 Pfam PF13521 AAA domain 234 394 1.6E-33 T 22-04-2016 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 SMART SM00530 6 62 5.0E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 PIRSF PIRSF004776 2 415 6.6E-221 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 SUPERFAMILY SSF52540 232 404 1.52E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 SUPERFAMILY SSF52374 65 229 5.09E-20 T 22-04-2016 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 Gene3D G3DSA:3.40.50.620 64 230 6.5E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 PANTHER PTHR37512 14 417 8.1E-158 T 22-04-2016 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 Pfam PF01381 Helix-turn-helix 7 58 2.8E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 1.8E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 3.8E-154 T 22-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 YPTB_RS03325 6b99e2a74f1f2aa67e04f6984419dcf1 423 Gene3D G3DSA:1.10.260.40 6 58 5.5E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 SUPERFAMILY SSF52518 59 469 1.33E-143 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 SUPERFAMILY SSF52922 702 885 2.17E-62 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624 787 869 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624 553 768 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624 363 450 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624 472 535 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624 75 294 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PIRSF PIRSF000156 1 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 Gene3D G3DSA:3.40.50.970 473 705 2.3E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 Gene3D G3DSA:3.40.50.970 59 469 3.6E-156 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 453 3.6E-5 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 109 294 2.6E-8 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 SUPERFAMILY SSF52518 474 701 1.3E-99 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624:SF67 787 869 0.0 T 22-04-2016 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624:SF67 553 768 0.0 T 22-04-2016 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624:SF67 363 450 0.0 T 22-04-2016 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624:SF67 472 535 0.0 T 22-04-2016 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 PANTHER PTHR11624:SF67 75 294 0.0 T 22-04-2016 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 Gene3D G3DSA:3.40.50.920 707 885 8.7E-76 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS03990 cfadaefb5769c2b8d95310d0d65dfa44 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YPTB_RS18400 e508b5f5a872c6c13e818d4ac67eda8a 217 PANTHER PTHR21327 1 215 6.8E-163 T 22-04-2016 YPTB_RS18400 e508b5f5a872c6c13e818d4ac67eda8a 217 Gene3D G3DSA:3.90.870.10 11 214 8.9E-93 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPTB_RS18400 e508b5f5a872c6c13e818d4ac67eda8a 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.4E-82 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS18400 e508b5f5a872c6c13e818d4ac67eda8a 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 208 1.8E-79 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS18400 e508b5f5a872c6c13e818d4ac67eda8a 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 41.897 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS18400 e508b5f5a872c6c13e818d4ac67eda8a 217 PANTHER PTHR21327:SF15 1 215 6.8E-163 T 22-04-2016 YPTB_RS18400 e508b5f5a872c6c13e818d4ac67eda8a 217 SUPERFAMILY SSF55821 7 210 1.01E-84 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPTB_RS00510 4a04bf71c3c4e9d8b3d37da8479b2aa7 211 Pfam PF07305 Protein of unknown function (DUF1454) 18 210 3.5E-84 T 22-04-2016 IPR009918 Protein of unknown function DUF1454 YPTB_RS08875 9751792c2ef67ad730cc6715efce5009 270 SUPERFAMILY SSF55486 34 245 1.54E-44 T 22-04-2016 YPTB_RS08875 9751792c2ef67ad730cc6715efce5009 270 Pfam PF06167 Glucose-regulated metallo-peptidase M90 12 243 1.5E-63 T 22-04-2016 IPR010384 MtfA family YPTB_RS08875 9751792c2ef67ad730cc6715efce5009 270 Gene3D G3DSA:3.40.390.10 27 244 3.7E-27 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YPTB_RS08875 9751792c2ef67ad730cc6715efce5009 270 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 68.235 T 22-04-2016 IPR010384 MtfA family YPTB_RS08875 9751792c2ef67ad730cc6715efce5009 270 PANTHER PTHR30164 1 270 1.0E-118 T 22-04-2016 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 PANTHER PTHR30389:SF6 2 546 0.0 T 22-04-2016 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 75 323 5.4E-31 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 Gene3D G3DSA:3.20.130.10 348 537 1.8E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 3.5E-84 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 PIRSF PIRSF001394 30 547 2.0E-231 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 PANTHER PTHR30389 2 546 0.0 T 22-04-2016 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 SUPERFAMILY SSF117457 361 536 3.79E-63 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 Pfam PF05683 Fumarase C-terminus 332 537 5.6E-94 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPTB_RS04420 1472f2789f9ec4093725c13fd8fe68db 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.6E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPTB_RS03740 cdeb1c94b04323ae3b595b877d1297fe 200 PANTHER PTHR11670 1 200 2.1E-121 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03740 cdeb1c94b04323ae3b595b877d1297fe 200 Pfam PF00694 Aconitase C-terminal domain 1 125 6.9E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03740 cdeb1c94b04323ae3b595b877d1297fe 200 Gene3D G3DSA:3.20.19.10 7 195 8.4E-47 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS03740 cdeb1c94b04323ae3b595b877d1297fe 200 PANTHER PTHR11670:SF27 1 200 2.1E-121 T 22-04-2016 YPTB_RS03740 cdeb1c94b04323ae3b595b877d1297fe 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.959 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03740 cdeb1c94b04323ae3b595b877d1297fe 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.4E-97 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03740 cdeb1c94b04323ae3b595b877d1297fe 200 SUPERFAMILY SSF52016 3 197 3.34E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Gene3D G3DSA:3.50.50.60 3 105 1.3E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Gene3D G3DSA:3.90.480.10 561 628 6.5E-10 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Gene3D G3DSA:3.30.413.10 633 768 2.7E-30 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 SUPERFAMILY SSF55124 501 626 9.6E-32 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 4.2E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 SUPERFAMILY SSF51905 2 310 9.61E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Gene3D G3DSA:3.50.50.60 106 309 3.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 SUPERFAMILY SSF56014 632 808 1.27E-45 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 620 4.5E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PANTHER PTHR11493 418 833 0.0 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PANTHER PTHR11493 2 256 0.0 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.1E-13 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-13 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.1E-13 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-13 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 8.5E-15 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 8.7E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 6.6E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 6.6E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PIRSF PIRSF037149 1 834 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PANTHER PTHR11493:SF52 418 833 0.0 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PANTHER PTHR11493:SF52 2 256 0.0 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 6.4E-11 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 6.4E-11 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 6.4E-11 T 22-04-2016 YPTB_RS20225 fa42f45eafe986052965533fdc456538 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 6.4E-11 T 22-04-2016 YPTB_RS18560 3ba79fbf1de11b586dcdce66cba0ce20 210 Pfam PF13309 HTH domain 148 210 6.7E-20 T 22-04-2016 YPTB_RS18560 3ba79fbf1de11b586dcdce66cba0ce20 210 PANTHER PTHR35568 3 210 2.1E-89 T 22-04-2016 YPTB_RS18560 3ba79fbf1de11b586dcdce66cba0ce20 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 3 112 3.0E-60 T 22-04-2016 IPR013559 YheO-like YPTB_RS18560 3ba79fbf1de11b586dcdce66cba0ce20 210 PANTHER PTHR35568:SF1 3 210 2.1E-89 T 22-04-2016 YPTB_RS18560 3ba79fbf1de11b586dcdce66cba0ce20 210 Pfam PF08348 YheO-like PAS domain 8 120 7.3E-39 T 22-04-2016 IPR013559 YheO-like YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 PANTHER PTHR24567:SF28 5 250 2.6E-137 T 22-04-2016 YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 8.8E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 8.8E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 3.9E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 SMART SM00100 30 151 3.1E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 SMART SM00419 187 235 1.7E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 Gene3D G3DSA:2.60.120.10 18 169 8.5E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 1.8E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 SUPERFAMILY SSF46785 165 245 3.79E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 Gene3D G3DSA:1.10.10.10 170 235 3.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 SUPERFAMILY SSF51206 23 162 4.06E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like YPTB_RS12125 0184f3eec9b3baa691301acbf81273e4 250 PANTHER PTHR24567 5 250 2.6E-137 T 22-04-2016 YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 6.9E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 Gene3D G3DSA:2.170.130.10 32 165 2.4E-40 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 PANTHER PTHR30069:SF2 10 663 1.1E-154 T 22-04-2016 YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 22-04-2016 IPR010916 TonB box, conserved site YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 PANTHER PTHR30069 10 663 1.1E-154 T 22-04-2016 YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 SUPERFAMILY SSF56935 39 665 2.52E-126 T 22-04-2016 YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 Pfam PF00593 TonB dependent receptor 400 663 4.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS07425 1c9966eaec7ede3d8662465b82980ef4 665 Gene3D G3DSA:2.40.170.20 166 665 8.8E-101 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 PIRSF PIRSF002599 1 69 3.5E-18 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 Gene3D G3DSA:2.40.50.140 5 67 9.8E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 3.1E-20 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 SUPERFAMILY SSF50249 3 67 1.84E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 PANTHER PTHR11544 1 68 2.6E-15 T 22-04-2016 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 SMART SM00357 5 69 1.1E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 6 21 4.9E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 27 36 4.9E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 42 60 4.9E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS07855 80047d184959eaa2daaf9939cf3fc927 69 PANTHER PTHR11544:SF65 1 68 2.6E-15 T 22-04-2016 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 PANTHER PTHR23135:SF2 1 437 3.7E-176 T 22-04-2016 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 PANTHER PTHR23135 1 437 3.7E-176 T 22-04-2016 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 SUPERFAMILY SSF51984 3 94 8.24E-25 T 22-04-2016 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 Pfam PF08245 Mur ligase middle domain 110 280 1.1E-26 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 SUPERFAMILY SSF53244 299 437 3.25E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 SUPERFAMILY SSF53623 95 297 1.7E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 Gene3D G3DSA:3.90.190.20 300 433 7.2E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 Gene3D G3DSA:3.40.1190.10 94 299 1.3E-68 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 355 9.3E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 Gene3D G3DSA:3.40.50.720 3 93 3.3E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.388 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS03845 66be52787cfa0909b6e4ee1e96e95b68 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 4.3E-123 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPTB_RS06585 7f49cc6200c1de1e495a8d5ae32bc862 81 Gene3D G3DSA:1.10.720.30 14 71 7.3E-33 T 22-04-2016 IPR003034 SAP domain YPTB_RS06585 7f49cc6200c1de1e495a8d5ae32bc862 81 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 7 68 8.5E-35 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 YPTB_RS00985 fdcb6943822b008ea66287d84bdef0c1 93 SUPERFAMILY SSF54534 4 90 2.68E-30 T 22-04-2016 YPTB_RS00985 fdcb6943822b008ea66287d84bdef0c1 93 Gene3D G3DSA:3.10.50.40 4 91 2.5E-35 T 22-04-2016 YPTB_RS00985 fdcb6943822b008ea66287d84bdef0c1 93 PANTHER PTHR10657 2 92 2.0E-38 T 22-04-2016 YPTB_RS00985 fdcb6943822b008ea66287d84bdef0c1 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.1E-24 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.1E-36 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.1E-36 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.1E-36 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.1E-36 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.1E-36 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.1E-36 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 7.6E-6 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 7.6E-6 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 SUPERFAMILY SSF52317 3 190 4.01E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PANTHER PTHR11922:SF25 1 189 3.0E-93 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 2.9E-55 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PANTHER PTHR11922 1 189 3.0E-93 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.2E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 Gene3D G3DSA:3.40.50.880 3 188 3.5E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 7.0E-14 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 7.0E-14 T 22-04-2016 YPTB_RS11640 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 7.0E-14 T 22-04-2016 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 Gene3D G3DSA:2.30.30.100 271 318 2.1E-24 T 22-04-2016 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 PANTHER PTHR12835 8 317 1.4E-101 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 73 5.9E-24 T 22-04-2016 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 1.5E-78 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.6E-24 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.812 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 SUPERFAMILY SSF55681 71 268 2.61E-59 T 22-04-2016 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 Gene3D G3DSA:3.30.930.10 76 269 7.7E-61 T 22-04-2016 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 SUPERFAMILY SSF46785 8 60 1.61E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 SUPERFAMILY SSF50037 271 317 6.87E-12 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 Pfam PF08279 HTH domain 14 58 9.4E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 Gene3D G3DSA:1.10.10.10 3 62 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS01610 f9346cf948591b40df65085790f8e2c2 319 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 1.3E-13 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 YPTB_RS00545 281eeb45ea6cb9f5ad9c36d112b83061 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.09 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 YPTB_RS00545 281eeb45ea6cb9f5ad9c36d112b83061 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 1.7E-28 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 YPTB_RS21060 ba48669213299d811c9b08dc4fcda10e 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS21060 ba48669213299d811c9b08dc4fcda10e 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS21060 ba48669213299d811c9b08dc4fcda10e 261 Pfam PF13276 HTH-like domain 24 76 3.7E-16 T 22-04-2016 IPR025948 HTH-like domain YPTB_RS21060 ba48669213299d811c9b08dc4fcda10e 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS21060 ba48669213299d811c9b08dc4fcda10e 261 PANTHER PTHR32552 1 258 4.0E-89 T 22-04-2016 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 PANTHER PTHR11544 1 70 7.8E-48 T 22-04-2016 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 7 22 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 43 61 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 28 37 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 SMART SM00357 6 70 1.6E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.9E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 PIRSF PIRSF002599 1 70 9.1E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 SUPERFAMILY SSF50249 3 69 1.12E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 PANTHER PTHR11544:SF54 1 70 7.8E-48 T 22-04-2016 YPTB_RS19395 55c03d32d59d683bf52175891209b8c6 70 Gene3D G3DSA:2.40.50.140 5 68 4.6E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 PANTHER PTHR11544 1 70 7.8E-48 T 22-04-2016 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 7 22 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 43 61 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 28 37 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 SMART SM00357 6 70 1.6E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.9E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 PIRSF PIRSF002599 1 70 9.1E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 SUPERFAMILY SSF50249 3 69 1.12E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 PANTHER PTHR11544:SF54 1 70 7.8E-48 T 22-04-2016 YPTB_RS19390 55c03d32d59d683bf52175891209b8c6 70 Gene3D G3DSA:2.40.50.140 5 68 4.6E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS08740 489363934b20699177939c2d148cc291 193 Pfam PF11198 Protein of unknown function (DUF2857) 6 182 2.6E-63 T 22-04-2016 IPR021364 Protein of unknown function DUF2857 YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 Gene3D G3DSA:3.10.350.10 71 115 3.5E-11 T 22-04-2016 IPR018392 LysM domain YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 PANTHER PTHR21666 185 325 1.1E-60 T 22-04-2016 YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 SMART SM00257 72 116 5.4E-10 T 22-04-2016 IPR018392 LysM domain YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 SUPERFAMILY SSF51261 72 324 5.23E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 Gene3D G3DSA:2.70.70.10 200 325 1.6E-40 T 22-04-2016 YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 Pfam PF01476 LysM domain 73 114 6.2E-8 T 22-04-2016 IPR018392 LysM domain YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 PANTHER PTHR21666:SF222 185 325 1.1E-60 T 22-04-2016 YPTB_RS04305 2f2e20a61d5cfa8e73529409e9acb855 327 Pfam PF01551 Peptidase family M23 227 320 5.5E-32 T 22-04-2016 IPR016047 Peptidase M23 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 SUPERFAMILY SSF52343 106 227 4.45E-24 T 22-04-2016 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PANTHER PTHR19370:SF113 3 245 3.6E-99 T 22-04-2016 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 Gene3D G3DSA:3.40.50.80 106 221 1.9E-24 T 22-04-2016 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 Pfam PF00175 Oxidoreductase NAD-binding domain 117 206 3.7E-5 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 241 312 3.2E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 SUPERFAMILY SSF63380 3 104 1.15E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 Pfam PF00970 Oxidoreductase FAD-binding domain 9 103 1.3E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 Gene3D G3DSA:2.40.30.10 4 104 6.9E-27 T 22-04-2016 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 SUPERFAMILY SSF54292 216 319 1.31E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 8.8E-26 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 8.8E-26 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 8.8E-26 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 8.8E-26 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 8.8E-26 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 8.8E-26 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 Gene3D G3DSA:3.10.20.30 222 319 9.4E-23 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS13735 b11dafd0f006e5b22656c4a9bfa66029 321 PANTHER PTHR19370 3 245 3.6E-99 T 22-04-2016 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 Gene3D G3DSA:3.40.50.300 3 167 2.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 7.6E-22 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 PANTHER PTHR11649:SF37 659 726 2.1E-291 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 PANTHER PTHR11649:SF37 1 150 2.1E-291 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 PANTHER PTHR11649:SF37 263 612 2.1E-291 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 161 1.0E-11 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 Pfam PF07670 Nucleoside recognition 354 444 8.6E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 Pfam PF07670 Nucleoside recognition 513 690 1.8E-36 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 Pfam PF02421 Ferrous iron transport protein B 5 163 2.9E-65 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 2.0E-226 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 PANTHER PTHR11649 659 726 2.1E-291 T 22-04-2016 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 PANTHER PTHR11649 1 150 2.1E-291 T 22-04-2016 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 PANTHER PTHR11649 263 612 2.1E-291 T 22-04-2016 YPTB_RS20375 f8f224a0d635eb51a442123b4ac38c83 771 SUPERFAMILY SSF52540 4 168 4.02E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 PANTHER PTHR11587 1 215 4.0E-106 T 22-04-2016 YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 50.435 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 PANTHER PTHR11587:SF3 1 215 4.0E-106 T 22-04-2016 YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 SUPERFAMILY SSF52402 1 215 3.53E-67 T 22-04-2016 YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 PIRSF PIRSF006293 1 226 1.9E-82 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 5.4E-83 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 214 2.6E-81 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPTB_RS05350 672dab55635d0342b33c91029a4181cd 232 Gene3D G3DSA:3.40.50.620 1 217 6.3E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 Gene3D G3DSA:3.40.30.10 39 179 2.4E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 PIRSF PIRSF015753 4 324 2.2E-133 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 SUPERFAMILY SSF47616 176 325 8.07E-37 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 3.9E-24 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 271 1.9E-12 T 22-04-2016 YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 PANTHER PTHR32419 1 324 5.7E-177 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 SUPERFAMILY SSF52833 126 163 1.64E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 SUPERFAMILY SSF52833 42 99 1.64E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS18890 a68fc577626b7ed742b881623df12884 328 Gene3D G3DSA:1.20.1050.10 180 288 1.7E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 PANTHER PTHR24220:SF380 7 237 1.1E-140 T 22-04-2016 YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 6 227 1.8E-109 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 SUPERFAMILY SSF52540 6 227 2.24E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 Pfam PF00005 ABC transporter 28 182 2.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 Gene3D G3DSA:3.40.50.300 6 226 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 PANTHER PTHR24220 7 237 1.1E-140 T 22-04-2016 YPTB_RS02915 758264885dbe4c90f4e6fe36b356fd19 239 SMART SM00382 37 230 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 PANTHER PTHR31793:SF9 1 133 5.9E-53 T 22-04-2016 YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 PANTHER PTHR31793 1 133 5.9E-53 T 22-04-2016 YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 4.9E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 Pfam PF03061 Thioesterase superfamily 20 103 1.2E-15 T 22-04-2016 IPR006683 Thioesterase domain YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 PIRSF PIRSF003230 1 133 1.5E-46 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 Gene3D G3DSA:3.10.129.10 3 131 6.9E-47 T 22-04-2016 IPR029069 HotDog domain YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 SUPERFAMILY SSF54637 4 132 5.9E-38 T 22-04-2016 IPR029069 HotDog domain YPTB_RS06380 c782f3af55a73339f2c85351710e716e 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 6.6E-42 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 SUPERFAMILY SSF54975 3 92 6.11E-30 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 PANTHER PTHR10029 2 92 3.9E-36 T 22-04-2016 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 61 81 7.5E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 5 20 7.5E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 26 51 7.5E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 Gene3D G3DSA:3.30.70.100 8 91 5.8E-30 T 22-04-2016 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 30.225 T 22-04-2016 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 Pfam PF00708 Acylphosphatase 6 91 1.4E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS08070 d9e8e44588124e2b8c402ee904357235 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 2.8E-58 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 PIRSF PIRSF005461 1 209 9.4E-82 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 PANTHER PTHR10920:SF20 1 208 5.2E-143 T 22-04-2016 YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 PANTHER PTHR10920 1 208 5.2E-143 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.8E-94 T 22-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 Gene3D G3DSA:3.40.50.150 1 208 3.0E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.402 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YPTB_RS02705 83666caa3e500841ab9d45a6f5eda363 209 SUPERFAMILY SSF53335 31 207 1.02E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 3.1E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Gene3D G3DSA:2.40.50.140 16 154 8.9E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PANTHER PTHR22594:SF4 1 503 4.5E-290 T 22-04-2016 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PIRSF PIRSF039101 1 505 9.3E-199 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Gene3D G3DSA:3.30.930.10 157 500 2.7E-121 T 22-04-2016 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 SUPERFAMILY SSF50249 13 155 1.52E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 SUPERFAMILY SSF55681 162 502 3.06E-123 T 22-04-2016 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 2.0E-228 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.105 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PANTHER PTHR22594 1 503 4.5E-290 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS17140 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.1E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 PANTHER PTHR26402:SF576 3 229 2.6E-155 T 22-04-2016 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 Gene3D G3DSA:3.40.50.2300 3 124 1.5E-40 T 22-04-2016 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 Pfam PF00072 Response regulator receiver domain 5 117 9.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.0E-114 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 Gene3D G3DSA:1.10.10.10 129 226 1.3E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 SMART SM00448 3 116 1.3E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 PANTHER PTHR26402 3 229 2.6E-155 T 22-04-2016 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.3E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 SMART SM00862 150 225 3.2E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 SUPERFAMILY SSF46894 129 226 3.68E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS05095 7b41a020f895695e85526dfacbdde5f0 229 SUPERFAMILY SSF52172 3 126 1.08E-42 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS00970 6976622be8ba9e18b7411adcfe80511a 176 Gene3D G3DSA:2.60.40.1090 25 175 1.7E-22 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS00970 6976622be8ba9e18b7411adcfe80511a 176 PANTHER PTHR33420:SF10 1 176 6.8E-55 T 22-04-2016 YPTB_RS00970 6976622be8ba9e18b7411adcfe80511a 176 PANTHER PTHR33420 1 176 6.8E-55 T 22-04-2016 YPTB_RS00970 6976622be8ba9e18b7411adcfe80511a 176 SUPERFAMILY SSF49401 25 175 1.29E-21 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS00970 6976622be8ba9e18b7411adcfe80511a 176 Pfam PF16970 Type-1 fimbrial protein, A 52 175 2.2E-12 T 22-04-2016 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 Gene3D G3DSA:2.150.10.10 28 136 5.2E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 Gene3D G3DSA:3.30.1300.30 274 361 3.9E-19 T 22-04-2016 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 SUPERFAMILY SSF54523 274 361 2.51E-17 T 22-04-2016 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 Pfam PF03895 YadA-like C-terminal region 289 361 4.0E-12 T 22-04-2016 IPR005594 YadA-like, C-terminal YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 PANTHER PTHR35843 1 363 2.6E-84 T 22-04-2016 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 SUPERFAMILY SSF101967 27 136 3.79E-10 T 22-04-2016 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 114 134 7.8E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 267 283 1.9E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 75 95 1.9E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 173 191 1.9E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPTB_RS07795 5f9722b87e6553d3395f460203efe9f8 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 240 255 1.9E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:3.40.50.980 337 399 2.6E-31 T 22-04-2016 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:3.40.50.980 193 284 2.6E-31 T 22-04-2016 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 PANTHER PTHR24096:SF193 10 601 2.0E-227 T 22-04-2016 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 Pfam PF00501 AMP-binding enzyme 16 470 1.7E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 SUPERFAMILY SSF56801 340 599 1.31E-109 T 22-04-2016 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 SUPERFAMILY SSF56801 8 289 1.31E-109 T 22-04-2016 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:2.30.38.10 400 461 3.7E-19 T 22-04-2016 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 PANTHER PTHR24096 10 601 2.0E-227 T 22-04-2016 YPTB_RS03775 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:3.40.50.980 11 192 9.9E-30 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Pfam PF13286 Phosphohydrolase-associated domain 462 501 7.6E-6 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 SUPERFAMILY SSF109604 252 433 4.71E-64 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 SUPERFAMILY SSF109604 30 134 4.71E-64 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 SUPERFAMILY SSF109604 183 216 4.71E-64 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 SUPERFAMILY SSF109604 485 503 4.71E-64 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 506 53.236 T 22-04-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3210.10 184 269 4.9E-68 T 22-04-2016 IPR006674 HD domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3210.10 4 122 4.9E-68 T 22-04-2016 IPR006674 HD domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Pfam PF01966 HD domain 66 133 3.0E-10 T 22-04-2016 IPR006674 HD domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3410.10 270 391 4.8E-33 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 PANTHER PTHR11373:SF29 183 342 6.4E-98 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 PANTHER PTHR11373:SF29 23 142 6.4E-98 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 504 5.5E-126 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3550.10 392 504 4.7E-35 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3550.10 123 156 4.7E-35 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 SMART SM00471 62 283 2.4E-11 T 22-04-2016 IPR003607 HD/PDEase domain YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 PANTHER PTHR11373 183 342 6.4E-98 T 22-04-2016 YPTB_RS04165 339cff3ebd287f2b07fdd6d6e59bb94d 506 PANTHER PTHR11373 23 142 6.4E-98 T 22-04-2016 YPTB_RS00490 e082bab057e29ce223f71e8b59e2c2ed 237 PANTHER PTHR33254:SF5 1 233 6.4E-101 T 22-04-2016 YPTB_RS00490 e082bab057e29ce223f71e8b59e2c2ed 237 Gene3D G3DSA:3.50.30.40 27 185 7.1E-47 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB_RS00490 e082bab057e29ce223f71e8b59e2c2ed 237 SUPERFAMILY SSF89562 27 188 6.54E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB_RS00490 e082bab057e29ce223f71e8b59e2c2ed 237 Pfam PF03737 Demethylmenaquinone methyltransferase 32 178 1.7E-37 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB_RS00490 e082bab057e29ce223f71e8b59e2c2ed 237 PANTHER PTHR33254 1 233 6.4E-101 T 22-04-2016 YPTB_RS00490 e082bab057e29ce223f71e8b59e2c2ed 237 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 8 229 1.4E-104 T 22-04-2016 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 PANTHER PTHR30258:SF9 13 503 9.5E-287 T 22-04-2016 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 13 494 6.4E-191 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 SMART SM00382 249 367 0.0027 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 PANTHER PTHR30258 13 503 9.5E-287 T 22-04-2016 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 316 330 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 SUPERFAMILY SSF160246 11 75 1.07E-11 T 22-04-2016 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 Gene3D G3DSA:3.30.450.90 90 221 1.6E-49 T 22-04-2016 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 Pfam PF00437 Type II/IV secretion system protein 123 388 9.3E-81 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 Gene3D G3DSA:3.40.50.300 227 499 5.7E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16590 50a79615535929ebc9be99f2d434c8af 503 SUPERFAMILY SSF52540 105 494 2.53E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 PANTHER PTHR10804:SF75 1 260 2.9E-190 T 22-04-2016 YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.3E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.3E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.3E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.3E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 SUPERFAMILY SSF55920 3 255 3.14E-90 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 PANTHER PTHR10804 1 260 2.9E-190 T 22-04-2016 YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 Gene3D G3DSA:3.90.230.10 3 259 5.6E-99 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.1E-108 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 Pfam PF00557 Metallopeptidase family M24 13 242 1.3E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPTB_RS16260 5c3291575eed8b47f7a42378a8e43b52 263 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.282 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 PANTHER PTHR30043:SF1 80 286 3.6E-109 T 22-04-2016 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 SUPERFAMILY SSF161098 88 274 3.92E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 PANTHER PTHR30043 6 62 3.6E-109 T 22-04-2016 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 PANTHER PTHR30043 80 286 3.6E-109 T 22-04-2016 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 271 2.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 PANTHER PTHR30043:SF1 6 62 3.6E-109 T 22-04-2016 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 Gene3D G3DSA:1.10.3720.10 89 282 2.9E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06785 2a3e03edca5dd2fe89940657b7ff27bc 286 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 282 9.6E-85 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.2E-209 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 SUPERFAMILY SSF55681 104 464 3.98E-96 T 22-04-2016 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.1E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 Gene3D G3DSA:3.30.930.10 109 462 7.1E-113 T 22-04-2016 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594 8 180 1.3E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594 199 464 1.3E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594:SF6 8 180 1.3E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594:SF6 199 464 1.3E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 SUPERFAMILY SSF50249 14 102 4.07E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.548 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 Gene3D G3DSA:2.40.50.140 14 104 2.5E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07925 578d5548b3219df4688d269372e5ba47 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 5.0E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS18445 3a9c20c2037a024d43491e91375dc7a9 272 PANTHER PTHR30622 3 272 2.6E-149 T 22-04-2016 YPTB_RS18445 3a9c20c2037a024d43491e91375dc7a9 272 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.2E-80 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YPTB_RS18445 3a9c20c2037a024d43491e91375dc7a9 272 PANTHER PTHR30622:SF3 3 272 2.6E-149 T 22-04-2016 YPTB_RS18445 3a9c20c2037a024d43491e91375dc7a9 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 6.6E-99 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YPTB_RS18445 3a9c20c2037a024d43491e91375dc7a9 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.356 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YPTB_RS08020 6332d2a6d770b92ffdc6836bca6af249 168 SUPERFAMILY SSF52540 32 146 9.96E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08020 6332d2a6d770b92ffdc6836bca6af249 168 Pfam PF03846 Cell division inhibitor SulA 9 120 1.8E-54 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YPTB_RS08020 6332d2a6d770b92ffdc6836bca6af249 168 Gene3D G3DSA:3.40.50.300 32 146 3.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08020 6332d2a6d770b92ffdc6836bca6af249 168 PIRSF PIRSF003093 1 168 2.1E-87 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YPTB_RS08020 6332d2a6d770b92ffdc6836bca6af249 168 PANTHER PTHR35369 1 168 1.1E-59 T 22-04-2016 YPTB_RS08020 6332d2a6d770b92ffdc6836bca6af249 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 40.222 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 Pfam PF06761 Intracellular multiplication and human macrophage-killing 508 821 5.4E-78 T 22-04-2016 IPR009612 ImcF-related YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 PANTHER PTHR36153 1 1177 0.0 T 22-04-2016 YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 26 1174 0.0 T 22-04-2016 IPR017731 Type VI secretion system, IcmF YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 Pfam PF14331 ImcF-related N-terminal domain 203 452 3.8E-70 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 SUPERFAMILY SSF52540 111 295 2.01E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 PANTHER PTHR36153:SF1 1 1177 0.0 T 22-04-2016 YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 Gene3D G3DSA:3.40.50.300 122 303 5.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19605 b3eb32c199f321aff93cc4d41b227b18 1177 Pfam PF06744 Type VI secretion protein IcmF C-terminal 929 1125 1.3E-58 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPTB_RS11520 e4b8c190c89f068c0873b26d8c06ad20 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.2E-78 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPTB_RS11520 e4b8c190c89f068c0873b26d8c06ad20 214 PANTHER PTHR33508 4 214 2.9E-103 T 22-04-2016 YPTB_RS11520 e4b8c190c89f068c0873b26d8c06ad20 214 PANTHER PTHR33508:SF1 4 214 2.9E-103 T 22-04-2016 YPTB_RS11520 e4b8c190c89f068c0873b26d8c06ad20 214 Pfam PF01914 MarC family integral membrane protein 10 210 7.5E-73 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPTB_RS11890 1013a1079dd1943eba885854c07ebd67 349 PANTHER PTHR22604:SF53 1 345 1.1E-137 T 22-04-2016 YPTB_RS11890 1013a1079dd1943eba885854c07ebd67 349 Gene3D G3DSA:3.40.50.720 1 129 6.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11890 1013a1079dd1943eba885854c07ebd67 349 Gene3D G3DSA:3.30.360.10 130 339 3.2E-33 T 22-04-2016 YPTB_RS11890 1013a1079dd1943eba885854c07ebd67 349 PANTHER PTHR22604 1 345 1.1E-137 T 22-04-2016 YPTB_RS11890 1013a1079dd1943eba885854c07ebd67 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 1.7E-13 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YPTB_RS11890 1013a1079dd1943eba885854c07ebd67 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.0E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS11890 1013a1079dd1943eba885854c07ebd67 349 SUPERFAMILY SSF51735 3 196 3.32E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 22-04-2016 YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 22-04-2016 YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 8.6E-70 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 PANTHER PTHR21235:SF1 2 196 2.9E-92 T 22-04-2016 YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 PIRSF PIRSF000495 1 196 1.7E-63 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 SUPERFAMILY SSF52317 3 195 4.28E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.404 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 PANTHER PTHR21235 2 196 2.9E-92 T 22-04-2016 YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 Gene3D G3DSA:3.40.50.880 1 196 1.2E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS08565 a2fa9a1ce4429c35711945859813a95f 196 Pfam PF00117 Glutamine amidotransferase class-I 39 194 1.6E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPTB_RS09960 4a5b74b0ca653c8d857c8c57864d8c82 89 Pfam PF11195 Protein of unknown function (DUF2829) 2 89 8.5E-25 T 22-04-2016 IPR021361 Protein of unknown function DUF2829 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 Pfam PF00171 Aldehyde dehydrogenase family 35 493 6.7E-159 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 Gene3D G3DSA:3.40.309.10 270 469 7.7E-59 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 SUPERFAMILY SSF53720 10 497 1.83E-158 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 Gene3D G3DSA:3.40.605.10 18 269 1.2E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS11990 27677470ea3b036a09aea71de4166e2f 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 PANTHER PTHR11934 5 234 2.2E-96 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 230 3.2E-82 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 Gene3D G3DSA:3.30.70.260 144 213 6.9E-25 T 22-04-2016 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 Gene3D G3DSA:3.40.50.1360 7 143 1.9E-54 T 22-04-2016 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 5 233 30.125 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 54 229 7.1E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 SUPERFAMILY SSF100950 4 151 5.12E-42 T 22-04-2016 YPTB_RS07325 2d5310c00c66b669eaabb0efba128601 236 SUPERFAMILY SSF75445 131 215 1.57E-20 T 22-04-2016 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00690 Adhesin family signature 83 96 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00690 Adhesin family signature 207 228 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00690 Adhesin family signature 260 278 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00690 Adhesin family signature 286 305 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00690 Adhesin family signature 52 70 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00690 Adhesin family signature 96 113 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 Gene3D G3DSA:3.40.50.1980 200 321 1.5E-42 T 22-04-2016 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00691 Adhesin B signature 256 273 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00691 Adhesin B signature 233 251 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00691 Adhesin B signature 52 73 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00691 Adhesin B signature 278 296 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00691 Adhesin B signature 96 115 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00691 Adhesin B signature 207 224 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PRINTS PR00691 Adhesin B signature 77 95 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 Gene3D G3DSA:3.40.50.1980 47 199 3.0E-53 T 22-04-2016 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 SUPERFAMILY SSF53807 50 321 2.06E-91 T 22-04-2016 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PANTHER PTHR30477:SF12 10 318 3.3E-174 T 22-04-2016 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 PANTHER PTHR30477 10 318 3.3E-174 T 22-04-2016 YPTB_RS12785 d8fffc7a35c6e5e3b5c9cd747c778bac 322 Pfam PF01297 Zinc-uptake complex component A periplasmic 55 318 4.1E-80 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 460 4.8E-31 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 PIRSF PIRSF000538 1 513 2.6E-141 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 Gene3D G3DSA:3.30.420.40 2 246 2.5E-63 T 22-04-2016 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 372 392 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 2.7E-62 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 PANTHER PTHR10196:SF67 1 516 4.2E-184 T 22-04-2016 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 SUPERFAMILY SSF53067 248 506 6.97E-61 T 22-04-2016 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 Gene3D G3DSA:3.30.420.40 249 507 3.3E-54 T 22-04-2016 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 TIGRFAM TIGR01312 XylB: xylulokinase 5 501 7.3E-146 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 PANTHER PTHR10196 1 516 4.2E-184 T 22-04-2016 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 131 143 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPTB_RS07320 c80f712524fbe4500a11465908883889 517 SUPERFAMILY SSF53067 4 249 7.87E-69 T 22-04-2016 YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.2E-123 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF00733 Asparagine synthase 212 366 2.7E-57 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF00733 Asparagine synthase 367 511 1.6E-40 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 PANTHER PTHR11772 2 538 0.0 T 22-04-2016 YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 Gene3D G3DSA:3.60.20.10 2 191 1.8E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 Gene3D G3DSA:3.40.50.620 192 510 3.7E-117 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 SUPERFAMILY SSF52402 212 483 1.13E-74 T 22-04-2016 YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.0E-40 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 SUPERFAMILY SSF56235 1 196 1.89E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS06175 8541d1cd6ca788bb775597bdae8c5931 554 PANTHER PTHR11772:SF11 2 538 0.0 T 22-04-2016 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 Pfam PF00155 Aminotransferase class I and II 40 378 1.6E-60 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 PANTHER PTHR13693 4 378 2.2E-176 T 22-04-2016 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.991 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 SUPERFAMILY SSF53383 3 378 1.88E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 Gene3D G3DSA:3.40.640.10 57 269 3.6E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 PANTHER PTHR13693:SF53 4 378 2.2E-176 T 22-04-2016 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 Gene3D G3DSA:3.90.1150.10 270 379 2.7E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS06560 b1e20ce81625c360da6d805b53170a40 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 378 5.1E-140 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 PANTHER PTHR11019:SF84 6 115 2.0E-60 T 22-04-2016 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 Gene3D G3DSA:1.10.10.60 5 60 6.2E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 SUPERFAMILY SSF46689 11 58 2.42E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 PANTHER PTHR11019 6 115 2.0E-60 T 22-04-2016 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 Pfam PF12833 Helix-turn-helix domain 30 108 1.7E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 Gene3D G3DSA:1.10.10.60 61 110 2.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 SUPERFAMILY SSF46689 60 110 2.91E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS08905 cb864c2b6602eb2de252a32cbe2fe3e4 128 SMART SM00342 24 107 2.4E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 Pfam PF13488 Glycine zipper 38 85 2.8E-11 T 22-04-2016 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 Gene3D G3DSA:3.30.1330.60 96 216 5.1E-38 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 SUPERFAMILY SSF103088 103 218 6.15E-37 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 PANTHER PTHR30128 13 219 8.4E-74 T 22-04-2016 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 2.4E-5 T 22-04-2016 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 2.4E-5 T 22-04-2016 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 2.4E-5 T 22-04-2016 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01021 OMPA domain signature 116 138 5.0E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01021 OMPA domain signature 146 161 5.0E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01021 OMPA domain signature 161 177 5.0E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS21125 6c785211c6df1d2a6d015a9d548ff633 219 Pfam PF00691 OmpA family 115 210 3.2E-21 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 PANTHER PTHR24220:SF151 5 318 5.7E-155 T 22-04-2016 YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 Pfam PF00005 ABC transporter 21 162 3.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 PANTHER PTHR24220 5 318 5.7E-155 T 22-04-2016 YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:3.40.50.300 6 240 1.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:2.40.50.100 359 373 2.5E-12 T 22-04-2016 YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:2.40.50.100 245 294 2.5E-12 T 22-04-2016 YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 SUPERFAMILY SSF50331 243 373 8.02E-21 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 SMART SM00382 29 217 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 SUPERFAMILY SSF52540 6 247 1.25E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12855 9586d16f2670f5f0167c685012297ac2 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20060 699318a71524e7a6b04f82d0da248795 121 SUPERFAMILY SSF75169 4 121 9.94E-38 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS20060 699318a71524e7a6b04f82d0da248795 121 Gene3D G3DSA:3.40.1260.10 4 121 1.1E-49 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS20060 699318a71524e7a6b04f82d0da248795 121 Hamap MF_00389 Protein TusC [tusC]. 3 121 37.128 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF YPTB_RS20060 699318a71524e7a6b04f82d0da248795 121 Pfam PF02635 DsrE/DsrF-like family 4 121 7.9E-25 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YPTB_RS20060 699318a71524e7a6b04f82d0da248795 121 PANTHER PTHR38780 3 121 9.8E-60 T 22-04-2016 YPTB_RS20060 699318a71524e7a6b04f82d0da248795 121 PANTHER PTHR38780:SF1 3 121 9.8E-60 T 22-04-2016 YPTB_RS20060 699318a71524e7a6b04f82d0da248795 121 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 121 2.6E-48 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF YPTB_RS05300 c546856cf1638b8d675c805104fb423b 104 SUPERFAMILY SSF82657 2 88 4.45E-29 T 22-04-2016 IPR002634 BolA protein YPTB_RS05300 c546856cf1638b8d675c805104fb423b 104 PANTHER PTHR12735:SF23 1 103 5.0E-71 T 22-04-2016 YPTB_RS05300 c546856cf1638b8d675c805104fb423b 104 Gene3D G3DSA:3.30.300.90 2 101 1.1E-31 T 22-04-2016 IPR002634 BolA protein YPTB_RS05300 c546856cf1638b8d675c805104fb423b 104 Pfam PF01722 BolA-like protein 10 83 8.4E-30 T 22-04-2016 IPR002634 BolA protein YPTB_RS05300 c546856cf1638b8d675c805104fb423b 104 PANTHER PTHR12735 1 103 5.0E-71 T 22-04-2016 YPTB_RS05300 c546856cf1638b8d675c805104fb423b 104 PIRSF PIRSF003113 1 99 8.8E-33 T 22-04-2016 IPR002634 BolA protein YPTB_RS21175 b7437e96ef772d3203b84ebae9b6879c 158 Pfam PF10517 Electron transfer DM13 62 157 7.2E-22 T 22-04-2016 IPR019545 DM13 domain YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 PIRSF PIRSF038996 1 172 2.5E-71 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 Gene3D G3DSA:3.40.50.360 1 168 7.4E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 SUPERFAMILY SSF52218 4 170 4.6E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384 141 175 3.5E-115 T 22-04-2016 YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384 1 120 3.5E-115 T 22-04-2016 YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384:SF77 141 175 3.5E-115 T 22-04-2016 YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384:SF77 1 120 3.5E-115 T 22-04-2016 YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 5.7E-77 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YPTB_RS06225 5834de8a9663be676c78792af08f6c8c 175 Pfam PF00258 Flavodoxin 6 160 4.7E-33 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 4 119 1.0E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.4E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PANTHER PTHR22912:SF48 1 314 2.2E-166 T 22-04-2016 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 233 315 3.7E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.9E-41 T 22-04-2016 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.9E-41 T 22-04-2016 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.9E-41 T 22-04-2016 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.9E-41 T 22-04-2016 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.9E-41 T 22-04-2016 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 SUPERFAMILY SSF51905 1 314 3.8E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 120 232 1.1E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.8E-125 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 YPTB_RS07730 397036a1e8a90c3a17e3300a3baaa2e4 320 PANTHER PTHR22912 1 314 2.2E-166 T 22-04-2016 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 Gene3D G3DSA:3.10.450.30 50 157 7.2E-45 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 PIRSF PIRSF001013 1 157 9.3E-72 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 115 134 4.6E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 137 155 4.6E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 94 112 4.6E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 54 71 4.6E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 74 91 4.6E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 SUPERFAMILY SSF53933 50 156 2.24E-38 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 YPTB_RS19175 ded49b1facbe96f90a0a85f188d88c58 157 Pfam PF00545 ribonuclease 67 154 1.3E-24 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 YPTB_RS02085 7d0f1f75ad0ecfea0514ba015ca1f8fa 191 PANTHER PTHR32097 1 191 2.9E-91 T 22-04-2016 YPTB_RS02085 7d0f1f75ad0ecfea0514ba015ca1f8fa 191 Gene3D G3DSA:2.60.60.30 22 184 2.6E-72 T 22-04-2016 YPTB_RS02085 7d0f1f75ad0ecfea0514ba015ca1f8fa 191 Pfam PF02342 TerD domain 1 187 2.3E-84 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPTB_RS20890 9249ba62bb654516b39a43e24884a97f 122 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 2.4E-56 T 22-04-2016 IPR009610 CbtA toxin of type IV toxin-antitoxin system YPTB_RS18765 4c7a1c8358cea7eab0f25880d5cfed95 499 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 167 179 - T 22-04-2016 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 YPTB_RS18765 4c7a1c8358cea7eab0f25880d5cfed95 499 SMART SM00220 16 352 0.0065 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YPTB_RS18765 4c7a1c8358cea7eab0f25880d5cfed95 499 Gene3D G3DSA:1.10.510.10 150 341 1.4E-14 T 22-04-2016 YPTB_RS18765 4c7a1c8358cea7eab0f25880d5cfed95 499 SUPERFAMILY SSF56112 145 268 7.01E-16 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS18765 4c7a1c8358cea7eab0f25880d5cfed95 499 Pfam PF00069 Protein kinase domain 152 314 4.0E-10 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YPTB_RS06530 58ee3916fa5a67972363b3f011f7593f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 3.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06530 58ee3916fa5a67972363b3f011f7593f 231 PANTHER PTHR30183 1 227 2.4E-92 T 22-04-2016 YPTB_RS06530 58ee3916fa5a67972363b3f011f7593f 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 5.8E-75 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 YPTB_RS06530 58ee3916fa5a67972363b3f011f7593f 231 SUPERFAMILY SSF161098 5 219 5.76E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06530 58ee3916fa5a67972363b3f011f7593f 231 Gene3D G3DSA:1.10.3720.10 7 226 5.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 PANTHER PTHR11700 1 102 1.1E-55 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20020 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPTB_RS11055 1d0a7cd665114783f19a2ee797cb47c9 288 Gene3D G3DSA:1.10.3720.10 4 272 6.7E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11055 1d0a7cd665114783f19a2ee797cb47c9 288 PANTHER PTHR30193:SF10 1 288 1.3E-93 T 22-04-2016 YPTB_RS11055 1d0a7cd665114783f19a2ee797cb47c9 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 279 1.4E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11055 1d0a7cd665114783f19a2ee797cb47c9 288 PANTHER PTHR30193 1 288 1.3E-93 T 22-04-2016 YPTB_RS11055 1d0a7cd665114783f19a2ee797cb47c9 288 SUPERFAMILY SSF161098 50 272 2.75E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 Pfam PF13416 Bacterial extracellular solute-binding protein 46 348 3.8E-53 T 22-04-2016 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 PANTHER PTHR30061 1 407 6.8E-144 T 22-04-2016 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 PRINTS PR00181 Maltose binding protein signature 129 148 2.0E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 PRINTS PR00181 Maltose binding protein signature 150 169 2.0E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 PRINTS PR00181 Maltose binding protein signature 69 87 2.0E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 PRINTS PR00181 Maltose binding protein signature 362 381 2.0E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 Gene3D G3DSA:3.40.190.10 153 332 2.0E-48 T 22-04-2016 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 SUPERFAMILY SSF53850 31 400 1.04E-79 T 22-04-2016 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 PANTHER PTHR30061:SF21 1 407 6.8E-144 T 22-04-2016 YPTB_RS16775 a58c86b4194b7432754128e174154dd9 411 Gene3D G3DSA:3.40.190.10 31 152 9.4E-21 T 22-04-2016 YPTB_RS10575 4858718edf715bd66af9419967f24e52 280 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 222 1.3E-36 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YPTB_RS10575 4858718edf715bd66af9419967f24e52 280 SUPERFAMILY SSF51621 7 233 3.04E-59 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS10575 4858718edf715bd66af9419967f24e52 280 PIRSF PIRSF015582 1 280 1.7E-79 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPTB_RS10575 4858718edf715bd66af9419967f24e52 280 PANTHER PTHR32308:SF3 1 280 7.4E-175 T 22-04-2016 YPTB_RS10575 4858718edf715bd66af9419967f24e52 280 PANTHER PTHR32308 1 280 7.4E-175 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPTB_RS10575 4858718edf715bd66af9419967f24e52 280 Gene3D G3DSA:3.20.20.60 7 233 1.1E-65 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS01825 699599aa9ca579f0df845ee4375e0d7d 385 Gene3D G3DSA:3.40.50.1820 42 385 6.4E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS01825 699599aa9ca579f0df845ee4375e0d7d 385 Pfam PF12715 Abhydrolase family 48 341 1.8E-20 T 22-04-2016 IPR025890 Abhydrolase, bacterial YPTB_RS01825 699599aa9ca579f0df845ee4375e0d7d 385 SUPERFAMILY SSF53474 164 385 3.41E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS01825 699599aa9ca579f0df845ee4375e0d7d 385 SUPERFAMILY SSF53474 60 139 3.41E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS01825 699599aa9ca579f0df845ee4375e0d7d 385 PANTHER PTHR17630 114 140 5.6E-17 T 22-04-2016 YPTB_RS01825 699599aa9ca579f0df845ee4375e0d7d 385 PANTHER PTHR17630 165 281 5.6E-17 T 22-04-2016 YPTB_RS01825 699599aa9ca579f0df845ee4375e0d7d 385 PANTHER PTHR17630 315 343 5.6E-17 T 22-04-2016 YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 PANTHER PTHR33705:SF2 1 90 2.1E-39 T 22-04-2016 YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.6E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 5.2E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 Gene3D G3DSA:3.30.1340.10 3 89 7.1E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 SUPERFAMILY SSF55594 4 90 1.02E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 PANTHER PTHR33705 1 90 2.1E-39 T 22-04-2016 YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 5.9E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 5.9E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS19105 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 5.9E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 Gene3D G3DSA:3.40.640.10 1 248 5.6E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 SUPERFAMILY SSF53383 2 374 2.86E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.6E-211 T 22-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 371 1.0E-83 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 PANTHER PTHR30244 1 376 0.0 T 22-04-2016 YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 PIRSF PIRSF000390 1 376 2.1E-116 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 PANTHER PTHR30244:SF14 1 376 0.0 T 22-04-2016 YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 Gene3D G3DSA:3.90.1150.10 251 375 1.7E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS01055 685e55de756d04d68b6214c8a8890a29 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.952 T 22-04-2016 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315|UniPathway: UPA00566 YPTB_RS15840 4a69e4dbf4df20c501ae363367f193bd 115 SUPERFAMILY SSF46973 16 113 1.44E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS15840 4a69e4dbf4df20c501ae363367f193bd 115 Gene3D G3DSA:1.20.58.80 15 115 1.7E-40 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS15840 4a69e4dbf4df20c501ae363367f193bd 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 20 112 3.6E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS15840 4a69e4dbf4df20c501ae363367f193bd 115 PANTHER PTHR34382 8 115 3.0E-54 T 22-04-2016 YPTB_RS15840 4a69e4dbf4df20c501ae363367f193bd 115 PANTHER PTHR34382:SF2 8 115 3.0E-54 T 22-04-2016 YPTB_RS15840 4a69e4dbf4df20c501ae363367f193bd 115 PIRSF PIRSF000699 10 115 4.7E-38 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF54849 137 203 4.81E-24 T 22-04-2016 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF52029 185 376 8.02E-82 T 22-04-2016 IPR027409 GroEL-like apical domain YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 5.0E-255 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.476 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:1.10.560.10 3 188 4.4E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF48592 406 521 1.91E-77 T 22-04-2016 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF48592 7 134 1.91E-77 T 22-04-2016 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 6.6E-93 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:3.50.7.10 189 368 6.9E-98 T 22-04-2016 IPR027409 GroEL-like apical domain YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 PANTHER PTHR11353 2 548 5.1E-259 T 22-04-2016 YPTB_RS02330 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:1.10.560.10 369 518 1.1E-38 T 22-04-2016 IPR027413 GroEL-like equatorial domain YPTB_RS11250 7206bc8e739d6410a038b93285cc8621 109 SUPERFAMILY SSF103481 11 108 8.76E-18 T 22-04-2016 YPTB_RS11250 7206bc8e739d6410a038b93285cc8621 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 29.6 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 YPTB_RS11250 7206bc8e739d6410a038b93285cc8621 109 PANTHER PTHR30561 5 109 2.7E-75 T 22-04-2016 YPTB_RS11250 7206bc8e739d6410a038b93285cc8621 109 PANTHER PTHR30561:SF6 5 109 2.7E-75 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 YPTB_RS11250 7206bc8e739d6410a038b93285cc8621 109 Pfam PF00893 Small Multidrug Resistance protein 11 99 6.0E-27 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 PANTHER PTHR32179 1 301 6.1E-132 T 22-04-2016 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 SUPERFAMILY SSF51690 130 301 5.1E-57 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 Gene3D G3DSA:3.90.1170.20 19 150 2.9E-49 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 Gene3D G3DSA:3.20.20.70 151 290 6.4E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 300 1.3E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 3.3E-26 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 PIRSF PIRSF006250 17 302 2.1E-103 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 SUPERFAMILY SSF54675 14 129 5.49E-32 T 22-04-2016 YPTB_RS03965 b15141bb76e44243fa6623cbcee147a6 302 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 301 2.8E-97 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 YPTB_RS15115 20da40b0884dc10af5828f3d0edb8286 118 Gene3D G3DSA:3.40.30.10 1 117 6.3E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15115 20da40b0884dc10af5828f3d0edb8286 118 SUPERFAMILY SSF52833 3 117 4.48E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15115 20da40b0884dc10af5828f3d0edb8286 118 PANTHER PTHR30041 1 117 4.1E-72 T 22-04-2016 YPTB_RS15115 20da40b0884dc10af5828f3d0edb8286 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 8.7E-48 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 YPTB_RS15115 20da40b0884dc10af5828f3d0edb8286 118 PANTHER PTHR30041:SF4 1 117 4.1E-72 T 22-04-2016 YPTB_RS15115 20da40b0884dc10af5828f3d0edb8286 118 Pfam PF03960 ArsC family 7 116 6.6E-23 T 22-04-2016 IPR006660 Arsenate reductase-like YPTB_RS08830 dc3b118ee56d9268ac51c5d7a3700a3f 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 3.3E-131 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 YPTB_RS08830 dc3b118ee56d9268ac51c5d7a3700a3f 430 PANTHER PTHR33362:SF2 1 430 1.6E-249 T 22-04-2016 YPTB_RS08830 dc3b118ee56d9268ac51c5d7a3700a3f 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 3.1E-113 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPTB_RS08830 dc3b118ee56d9268ac51c5d7a3700a3f 430 PIRSF PIRSF006066 1 428 5.3E-176 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 YPTB_RS08830 dc3b118ee56d9268ac51c5d7a3700a3f 430 PANTHER PTHR33362 1 430 1.6E-249 T 22-04-2016 YPTB_RS02860 c847e27df3771773134a0e0f1923fa88 407 SUPERFAMILY SSF48230 79 358 5.31E-47 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPTB_RS02860 c847e27df3771773134a0e0f1923fa88 407 PANTHER PTHR41379 1 407 1.1E-177 T 22-04-2016 YPTB_RS02860 c847e27df3771773134a0e0f1923fa88 407 Pfam PF05426 Alginate lyase 72 351 1.9E-71 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPTB_RS02860 c847e27df3771773134a0e0f1923fa88 407 Gene3D G3DSA:1.50.10.110 55 375 1.8E-68 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPTB_RS02860 c847e27df3771773134a0e0f1923fa88 407 PANTHER PTHR41379:SF1 1 407 1.1E-177 T 22-04-2016 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 SUPERFAMILY SSF56300 16 273 3.38E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS18360 b578103c757ef249c15459e66129c705 275 PANTHER PTHR12905 8 35 1.5E-123 T 22-04-2016 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 39.882 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 3.2E-20 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 PANTHER PTHR12905 51 275 1.5E-123 T 22-04-2016 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 PANTHER PTHR12905:SF7 51 275 1.5E-123 T 22-04-2016 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 PANTHER PTHR12905:SF7 8 35 1.5E-123 T 22-04-2016 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 5.0E-27 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 YPTB_RS18360 b578103c757ef249c15459e66129c705 275 Gene3D G3DSA:3.60.21.10 14 253 8.6E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS06275 41c558e51428dfebce3bb8e59338a514 131 PANTHER PTHR30629 2 130 6.4E-36 T 22-04-2016 YPTB_RS06275 41c558e51428dfebce3bb8e59338a514 131 PANTHER PTHR30629:SF2 2 130 6.4E-36 T 22-04-2016 YPTB_RS06275 41c558e51428dfebce3bb8e59338a514 131 Pfam PF13356 Domain of unknown function (DUF4102) 8 94 7.4E-18 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPTB_RS11005 231405e9c8d491ad986008ebef9115c2 133 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 5.7E-45 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB YPTB_RS11005 231405e9c8d491ad986008ebef9115c2 133 PIRSF PIRSF005610 1 125 6.4E-28 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB YPTB_RS11005 231405e9c8d491ad986008ebef9115c2 133 PANTHER PTHR39594 1 131 1.7E-52 T 22-04-2016 YPTB_RS10880 5c3129ab4a7b53acb03a6fb170124833 219 SUPERFAMILY SSF53335 36 207 6.52E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10880 5c3129ab4a7b53acb03a6fb170124833 219 Gene3D G3DSA:3.40.50.150 39 206 2.6E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10880 5c3129ab4a7b53acb03a6fb170124833 219 Pfam PF08242 Methyltransferase domain 54 151 4.6E-9 T 22-04-2016 IPR013217 Methyltransferase type 12 YPTB_RS10880 5c3129ab4a7b53acb03a6fb170124833 219 PIRSF PIRSF011491 1 219 3.2E-96 T 22-04-2016 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted YPTB_RS10375 037eb3efbcc04485cb363cf473a90621 577 Pfam PF13489 Methyltransferase domain 373 501 4.0E-14 T 22-04-2016 YPTB_RS10375 037eb3efbcc04485cb363cf473a90621 577 PANTHER PTHR10953 89 214 1.4E-17 T 22-04-2016 YPTB_RS10375 037eb3efbcc04485cb363cf473a90621 577 Gene3D G3DSA:3.40.50.720 90 330 8.2E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10375 037eb3efbcc04485cb363cf473a90621 577 Gene3D G3DSA:3.40.50.150 347 548 2.5E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10375 037eb3efbcc04485cb363cf473a90621 577 SUPERFAMILY SSF53335 353 557 6.37E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10375 037eb3efbcc04485cb363cf473a90621 577 Pfam PF00899 ThiF family 92 336 2.6E-29 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS10375 037eb3efbcc04485cb363cf473a90621 577 SUPERFAMILY SSF69572 89 333 1.96E-42 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS20390 e894c2b49fff24ead3332893a292d109 258 Pfam PF00561 alpha/beta hydrolase fold 16 242 9.9E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS20390 e894c2b49fff24ead3332893a292d109 258 PANTHER PTHR10992 1 255 9.2E-145 T 22-04-2016 YPTB_RS20390 e894c2b49fff24ead3332893a292d109 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.673 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 YPTB_RS20390 e894c2b49fff24ead3332893a292d109 258 SUPERFAMILY SSF53474 3 252 4.75E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20390 e894c2b49fff24ead3332893a292d109 258 Gene3D G3DSA:3.40.50.1820 3 255 5.1E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20390 e894c2b49fff24ead3332893a292d109 258 PANTHER PTHR10992:SF812 1 255 9.2E-145 T 22-04-2016 YPTB_RS20390 e894c2b49fff24ead3332893a292d109 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 2.7E-101 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 YPTB_RS13775 bfe0a03adef34106a9ec08790319e259 305 PANTHER PTHR32196 20 299 1.4E-92 T 22-04-2016 YPTB_RS13775 bfe0a03adef34106a9ec08790319e259 305 Gene3D G3DSA:3.40.50.2300 146 293 2.2E-43 T 22-04-2016 YPTB_RS13775 bfe0a03adef34106a9ec08790319e259 305 PANTHER PTHR32196:SF9 20 299 1.4E-92 T 22-04-2016 YPTB_RS13775 bfe0a03adef34106a9ec08790319e259 305 Pfam PF13407 Periplasmic binding protein domain 31 276 1.7E-54 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS13775 bfe0a03adef34106a9ec08790319e259 305 SUPERFAMILY SSF53822 16 300 1.28E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS13775 bfe0a03adef34106a9ec08790319e259 305 Gene3D G3DSA:3.40.50.2300 27 145 2.3E-43 T 22-04-2016 YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 Gene3D G3DSA:3.40.50.300 1114 1201 1.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 PANTHER PTHR32114 2 731 5.0E-112 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 PANTHER PTHR32114 817 1224 5.0E-112 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 Gene3D G3DSA:3.40.50.300 257 348 2.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 Pfam PF13476 AAA domain 5 237 3.6E-27 T 22-04-2016 YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 SUPERFAMILY SSF52540 1 238 2.07E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 SUPERFAMILY SSF52540 413 496 2.07E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1110 1181 2.8E-15 T 22-04-2016 YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 Gene3D G3DSA:3.40.50.300 1 163 1.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 SUPERFAMILY SSF52540 1004 1199 1.04E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 PANTHER PTHR32114:SF2 2 731 5.0E-112 T 22-04-2016 YPTB_RS05080 ad540368267c6c3253643a415bbf4e3e 1229 PANTHER PTHR32114:SF2 817 1224 5.0E-112 T 22-04-2016 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 SMART SM00062 44 268 1.6E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 Gene3D G3DSA:3.40.190.10 227 266 5.3E-17 T 22-04-2016 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 Gene3D G3DSA:3.40.190.10 41 121 5.3E-17 T 22-04-2016 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 267 8.4E-35 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 Gene3D G3DSA:1.10.530.10 287 460 5.8E-37 T 22-04-2016 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 Gene3D G3DSA:3.40.190.10 122 226 2.2E-7 T 22-04-2016 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 PANTHER PTHR21666 273 484 1.4E-142 T 22-04-2016 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 Pfam PF01464 Transglycosylase SLT domain 298 402 4.9E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.428 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 SUPERFAMILY SSF53955 290 451 7.39E-35 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 PANTHER PTHR21666:SF215 273 484 1.4E-142 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPTB_RS15570 ae17cd0e59e079ff4686245882af3a82 486 SUPERFAMILY SSF53850 45 267 4.35E-40 T 22-04-2016 YPTB_RS13675 6474d268628f53379de182a5506c0cde 428 Gene3D G3DSA:3.40.190.10 154 359 4.0E-32 T 22-04-2016 YPTB_RS13675 6474d268628f53379de182a5506c0cde 428 PANTHER PTHR30061:SF18 1 427 4.5E-268 T 22-04-2016 YPTB_RS13675 6474d268628f53379de182a5506c0cde 428 Pfam PF13416 Bacterial extracellular solute-binding protein 56 364 2.7E-34 T 22-04-2016 YPTB_RS13675 6474d268628f53379de182a5506c0cde 428 PANTHER PTHR30061 1 427 4.5E-268 T 22-04-2016 YPTB_RS13675 6474d268628f53379de182a5506c0cde 428 SUPERFAMILY SSF53850 22 427 1.83E-61 T 22-04-2016 YPTB_RS20065 d88428e496b37c12194a938287748596 131 SUPERFAMILY SSF75169 1 131 6.67E-37 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS20065 d88428e496b37c12194a938287748596 131 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 4 131 39.481 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YPTB_RS20065 d88428e496b37c12194a938287748596 131 Pfam PF02635 DsrE/DsrF-like family 5 131 7.6E-28 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YPTB_RS20065 d88428e496b37c12194a938287748596 131 Gene3D G3DSA:3.40.1260.10 5 131 1.1E-29 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS20065 d88428e496b37c12194a938287748596 131 PANTHER PTHR34874 4 131 9.5E-65 T 22-04-2016 YPTB_RS20065 d88428e496b37c12194a938287748596 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 1.2E-54 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YPTB_RS20065 d88428e496b37c12194a938287748596 131 PANTHER PTHR34874:SF1 4 131 9.5E-65 T 22-04-2016 YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 PANTHER PTHR30471:SF5 1 222 1.8E-151 T 22-04-2016 YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 PANTHER PTHR30471 1 222 1.8E-151 T 22-04-2016 YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 52.775 T 22-04-2016 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 Gene3D G3DSA:3.40.140.10 100 222 8.2E-49 T 22-04-2016 YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 Pfam PF04002 RadC-like JAB domain 107 220 1.7E-43 T 22-04-2016 IPR025657 RadC-like JAB domain YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 222 3.7E-82 T 22-04-2016 IPR001405 RadC protein YPTB_RS00330 13f0a0c8e0ce38c84603441951afeb6d 222 SUPERFAMILY SSF47781 16 83 5.34E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPTB_RS03065 6a192d58f63b614a8ffb2f473ec9f119 178 Gene3D G3DSA:1.10.1200.20 83 135 7.5E-5 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS06060 a52186c9f3a456adcb0d9158cd022dc9 220 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 218 1.8E-58 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YPTB_RS06060 a52186c9f3a456adcb0d9158cd022dc9 220 PANTHER PTHR12039 4 220 1.3E-65 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YPTB_RS06060 a52186c9f3a456adcb0d9158cd022dc9 220 SUPERFAMILY SSF52374 11 219 2.39E-58 T 22-04-2016 YPTB_RS06060 a52186c9f3a456adcb0d9158cd022dc9 220 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 219 31.591 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YPTB_RS06060 a52186c9f3a456adcb0d9158cd022dc9 220 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 74 1.7E-13 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS06060 a52186c9f3a456adcb0d9158cd022dc9 220 Gene3D G3DSA:3.40.50.620 12 219 2.0E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS06060 a52186c9f3a456adcb0d9158cd022dc9 220 Pfam PF01467 Cytidylyltransferase-like 13 193 2.3E-34 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 1.0E-22 T 22-04-2016 IPR025877 MobA-like NTP transferase YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 SUPERFAMILY SSF53448 5 252 5.42E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.326 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 8.4E-205 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 6.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 299 2.3E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 352 3.0E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 SUPERFAMILY SSF51161 255 438 1.66E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:2.160.10.10 324 455 1.9E-35 T 22-04-2016 YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:3.90.550.10 1 244 3.8E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 PANTHER PTHR22572:SF115 7 449 6.7E-234 T 22-04-2016 YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:2.160.10.10 245 323 1.2E-16 T 22-04-2016 YPTB_RS21400 12b5d1f50f6d2f5cf1d0e8666014b627 456 PANTHER PTHR22572 7 449 6.7E-234 T 22-04-2016 YPTB_RS03220 dc1bb5f34d4e130a7aa1303c1244f2af 390 Gene3D G3DSA:3.30.70.270 222 384 5.4E-48 T 22-04-2016 YPTB_RS03220 dc1bb5f34d4e130a7aa1303c1244f2af 390 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 375 1.9E-45 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS03220 dc1bb5f34d4e130a7aa1303c1244f2af 390 PANTHER PTHR10799:SF750 250 382 5.3E-20 T 22-04-2016 YPTB_RS03220 dc1bb5f34d4e130a7aa1303c1244f2af 390 SUPERFAMILY SSF55073 225 380 9.42E-43 T 22-04-2016 IPR029787 Nucleotide cyclase YPTB_RS03220 dc1bb5f34d4e130a7aa1303c1244f2af 390 SMART SM00267 209 379 1.6E-50 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS03220 dc1bb5f34d4e130a7aa1303c1244f2af 390 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 379 6.2E-44 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS03220 dc1bb5f34d4e130a7aa1303c1244f2af 390 PANTHER PTHR10799 250 382 5.3E-20 T 22-04-2016 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF52518 794 1164 8.99E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.920.10 417 619 1.8E-74 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 PANTHER PTHR32154 1 1177 0.0 T 22-04-2016 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF52518 2 254 2.35E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 SMART SM00890 622 679 2.2E-30 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 PIRSF PIRSF000159 1 1177 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 3.4E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.50.970 795 1168 2.9E-129 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF53323 417 668 2.62E-73 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.50.970 1 254 4.5E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 6.4E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF52922 255 410 4.14E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 6.0E-35 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.50.920 255 409 1.1E-58 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF54862 665 837 2.65E-22 T 22-04-2016 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 8.9E-9 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:4.10.780.10 628 668 8.5E-21 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF10371 Domain of unknown function 627 678 1.1E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 PANTHER PTHR32154:SF0 1 1177 0.0 T 22-04-2016 YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 1.9E-14 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YPTB_RS12285 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.30.70.20 671 782 1.7E-21 T 22-04-2016 YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 Pfam PF03466 LysR substrate binding domain 91 292 6.3E-36 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 SUPERFAMILY SSF46785 3 112 1.86E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 Gene3D G3DSA:1.10.10.10 2 84 3.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 Gene3D G3DSA:3.40.190.10 93 192 2.2E-25 T 22-04-2016 YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 PANTHER PTHR30537 1 303 4.1E-212 T 22-04-2016 YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 SUPERFAMILY SSF53850 91 294 2.17E-37 T 22-04-2016 YPTB_RS18345 9bd124099a0424c8dcb4296cd9daa70c 303 PANTHER PTHR30537:SF20 1 303 4.1E-212 T 22-04-2016 YPTB_RS08195 b54278059162076c726900ada79c11b4 578 Gene3D G3DSA:3.30.1330.60 434 551 1.1E-29 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS08195 b54278059162076c726900ada79c11b4 578 PANTHER PTHR30128 6 578 0.0 T 22-04-2016 YPTB_RS08195 b54278059162076c726900ada79c11b4 578 Pfam PF00691 OmpA family 447 543 6.3E-15 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS08195 b54278059162076c726900ada79c11b4 578 SUPERFAMILY SSF103088 427 548 2.22E-29 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS08195 b54278059162076c726900ada79c11b4 578 PANTHER PTHR30128:SF11 6 578 0.0 T 22-04-2016 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PANTHER PTHR32092:SF5 1 437 1.8E-246 T 22-04-2016 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 4.8E-55 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 Gene3D G3DSA:3.40.50.720 2 169 1.6E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PANTHER PTHR32092 1 437 1.8E-246 T 22-04-2016 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 SUPERFAMILY SSF51735 3 169 1.15E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 Gene3D G3DSA:3.90.110.10 170 434 9.8E-99 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 3.7E-50 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 YPTB_RS20200 329bd732978288e2ee15f0815e84983a 437 SUPERFAMILY SSF56327 172 435 8.63E-92 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 1.1E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Gene3D G3DSA:1.20.5.710 4 51 4.7E-20 T 22-04-2016 YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 SUPERFAMILY SSF54736 51 122 1.12E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 122 25.251 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Gene3D G3DSA:3.30.1390.10 52 122 8.6E-35 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 2.6E-14 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 SUPERFAMILY SSF48300 4 58 3.66E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 6.3E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS01675 1f7ea1d0229147fd6fa6ea2361fa0e17 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 7.0E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 YPTB_RS14905 14c7b250f99e084974f58fe1cfcaacb9 241 Gene3D G3DSA:3.60.40.10 4 198 2.3E-8 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 YPTB_RS14905 14c7b250f99e084974f58fe1cfcaacb9 241 SUPERFAMILY SSF81606 5 216 1.18E-8 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 YPTB_RS10360 36090c93d53efac8f09f7584fe61800d 319 SUPERFAMILY SSF53098 111 274 8.35E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS10360 36090c93d53efac8f09f7584fe61800d 319 Gene3D G3DSA:3.30.420.10 105 265 1.9E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS10360 36090c93d53efac8f09f7584fe61800d 319 Pfam PF13565 Homeodomain-like domain 11 82 4.4E-8 T 22-04-2016 YPTB_RS10360 36090c93d53efac8f09f7584fe61800d 319 Pfam PF00665 Integrase core domain 110 224 1.5E-21 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS10360 36090c93d53efac8f09f7584fe61800d 319 PANTHER PTHR32552 1 270 2.1E-36 T 22-04-2016 YPTB_RS17475 7c055fe05f174e0c86e8c26a3ca75e3e 366 Gene3D G3DSA:3.40.50.1980 33 173 1.2E-15 T 22-04-2016 YPTB_RS17475 7c055fe05f174e0c86e8c26a3ca75e3e 366 Pfam PF01497 Periplasmic binding protein 74 308 5.8E-22 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS17475 7c055fe05f174e0c86e8c26a3ca75e3e 366 SUPERFAMILY SSF53807 19 334 8.63E-47 T 22-04-2016 YPTB_RS17475 7c055fe05f174e0c86e8c26a3ca75e3e 366 PANTHER PTHR30535:SF5 19 365 1.8E-85 T 22-04-2016 YPTB_RS17475 7c055fe05f174e0c86e8c26a3ca75e3e 366 PANTHER PTHR30535 19 365 1.8E-85 T 22-04-2016 YPTB_RS17475 7c055fe05f174e0c86e8c26a3ca75e3e 366 Gene3D G3DSA:3.40.50.1980 179 332 1.2E-21 T 22-04-2016 YPTB_RS20550 c8ed296debedd4ec0848a0b133f0b975 231 PANTHER PTHR13903:SF7 1 231 1.5E-128 T 22-04-2016 YPTB_RS20550 c8ed296debedd4ec0848a0b133f0b975 231 Gene3D G3DSA:2.60.120.10 5 231 7.6E-71 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS20550 c8ed296debedd4ec0848a0b133f0b975 231 SUPERFAMILY SSF51182 1 231 1.4E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS20550 c8ed296debedd4ec0848a0b133f0b975 231 PANTHER PTHR13903 1 231 1.5E-128 T 22-04-2016 IPR012093 Pirin YPTB_RS20550 c8ed296debedd4ec0848a0b133f0b975 231 Pfam PF02678 Pirin 11 119 1.9E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain YPTB_RS20550 c8ed296debedd4ec0848a0b133f0b975 231 PIRSF PIRSF006232 1 231 3.2E-55 T 22-04-2016 IPR012093 Pirin YPTB_RS08375 3fac52a44aa0a35be434e158aae2d5f0 388 PANTHER PTHR30590:SF2 1 388 8.2E-149 T 22-04-2016 YPTB_RS08375 3fac52a44aa0a35be434e158aae2d5f0 388 Pfam PF04235 Protein of unknown function (DUF418) 216 374 1.5E-46 T 22-04-2016 IPR007349 Domain of unknown function DUF418 YPTB_RS08375 3fac52a44aa0a35be434e158aae2d5f0 388 PANTHER PTHR30590 1 388 8.2E-149 T 22-04-2016 YPTB_RS16625 4022be5deff6efccc5c52c4088b43e3c 316 Gene3D G3DSA:2.40.160.40 38 316 8.1E-47 T 22-04-2016 YPTB_RS16625 4022be5deff6efccc5c52c4088b43e3c 316 Pfam PF16946 Putative OMPG-porin 1 family 131 316 3.6E-9 T 22-04-2016 IPR031605 Putative OMPG-porin 1 family YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 Gene3D G3DSA:3.30.565.10 339 476 1.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 Pfam PF00672 HAMP domain 193 257 9.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 SMART SM00388 264 328 0.0017 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423 62 136 2.1E-165 T 22-04-2016 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423 206 480 2.1E-165 T 22-04-2016 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 475 1.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 Pfam PF08918 PhoQ Sensor 8 185 6.1E-89 T 22-04-2016 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423:SF496 62 136 2.1E-165 T 22-04-2016 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423:SF496 206 480 2.1E-165 T 22-04-2016 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 SMART SM00387 373 479 1.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 SUPERFAMILY SSF47384 247 322 6.28E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPTB_RS13245 442f1e8bc67dffde94e2af7c1ca3dce4 484 SUPERFAMILY SSF55874 335 475 6.16E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS11315 cd5d9040c065ae598cc9767cca6ce3fd 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.9E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein YPTB_RS11315 cd5d9040c065ae598cc9767cca6ce3fd 148 PIRSF PIRSF006173 1 145 6.5E-66 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 YPTB_RS11315 cd5d9040c065ae598cc9767cca6ce3fd 148 PANTHER PTHR37421 1 148 7.4E-84 T 22-04-2016 YPTB_RS11315 cd5d9040c065ae598cc9767cca6ce3fd 148 PANTHER PTHR37421:SF1 1 148 7.4E-84 T 22-04-2016 YPTB_RS11315 cd5d9040c065ae598cc9767cca6ce3fd 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 40.958 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 YPTB_RS13505 cec1a0546b7174d0efc9ef10cc0fc264 194 SUPERFAMILY SSF46894 123 188 2.58E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS13505 cec1a0546b7174d0efc9ef10cc0fc264 194 SMART SM00421 130 187 1.1E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS13505 cec1a0546b7174d0efc9ef10cc0fc264 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 133 183 1.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS13505 cec1a0546b7174d0efc9ef10cc0fc264 194 Gene3D G3DSA:1.10.10.10 132 185 7.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16560 8082228cd38f5d5d1b7720e93758a1fb 298 Gene3D G3DSA:1.10.40.60 184 231 7.6E-9 T 22-04-2016 YPTB_RS16560 8082228cd38f5d5d1b7720e93758a1fb 298 PANTHER PTHR38831:SF1 1 298 5.0E-78 T 22-04-2016 YPTB_RS16560 8082228cd38f5d5d1b7720e93758a1fb 298 PIRSF PIRSF002786 1 298 1.7E-53 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YPTB_RS16560 8082228cd38f5d5d1b7720e93758a1fb 298 Gene3D G3DSA:1.10.40.60 79 136 9.1E-4 T 22-04-2016 YPTB_RS16560 8082228cd38f5d5d1b7720e93758a1fb 298 PANTHER PTHR38831 1 298 5.0E-78 T 22-04-2016 YPTB_RS16560 8082228cd38f5d5d1b7720e93758a1fb 298 Pfam PF03934 Type II secretion system (T2SS), protein K 16 279 1.6E-17 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YPTB_RS16560 8082228cd38f5d5d1b7720e93758a1fb 298 SUPERFAMILY SSF158544 183 235 1.1E-11 T 22-04-2016 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 PANTHER PTHR30404 13 409 2.2E-139 T 22-04-2016 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 Gene3D G3DSA:3.40.630.40 332 407 1.5E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 Gene3D G3DSA:3.40.630.40 188 285 1.5E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 Pfam PF11741 AMIN domain 39 142 2.1E-27 T 22-04-2016 IPR021731 AMIN domain YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 SMART SM00646 250 404 8.0E-65 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 PANTHER PTHR30404:SF0 13 409 2.2E-139 T 22-04-2016 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.2E-52 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 SUPERFAMILY SSF53187 188 284 8.79E-55 T 22-04-2016 YPTB_RS16370 da8f0f245af3dfdfca3323268f648fba 416 SUPERFAMILY SSF53187 331 407 8.79E-55 T 22-04-2016 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 89 100 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 101 119 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 120 149 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 PANTHER PTHR10458:SF10 1 168 1.0E-113 T 22-04-2016 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.2E-64 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.435 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 SUPERFAMILY SSF56420 3 165 9.16E-62 T 22-04-2016 IPR023635 Peptide deformylase YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 PANTHER PTHR10458 1 168 1.0E-113 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 Gene3D G3DSA:3.90.45.10 5 166 1.6E-63 T 22-04-2016 IPR023635 Peptide deformylase YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 Pfam PF01327 Polypeptide deformylase 4 152 1.3E-49 T 22-04-2016 IPR023635 Peptide deformylase YPTB_RS19850 01b5a1b1b3cddddbbd146d33a14ec30a 170 PIRSF PIRSF004749 1 169 4.2E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 Gene3D G3DSA:3.10.20.30 242 339 1.6E-25 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 Gene3D G3DSA:2.40.30.10 17 109 5.1E-18 T 22-04-2016 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 291 299 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 Pfam PF00970 Oxidoreductase FAD-binding domain 39 110 2.0E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 SUPERFAMILY SSF54292 234 338 4.98E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 PANTHER PTHR19370 12 264 7.5E-145 T 22-04-2016 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 SUPERFAMILY SSF63380 17 111 2.04E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 PANTHER PTHR19370:SF89 12 264 7.5E-145 T 22-04-2016 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 3.2E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 PRINTS PR00406 Cytochrome B5 reductase signature 121 140 3.2E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 PRINTS PR00406 Cytochrome B5 reductase signature 61 68 3.2E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 266 332 8.1E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 SUPERFAMILY SSF52343 116 245 8.51E-30 T 22-04-2016 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 Pfam PF00175 Oxidoreductase NAD-binding domain 122 222 1.1E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPTB_RS07655 a9f9333e48106915f880c21104219b6e 340 Gene3D G3DSA:3.40.50.80 110 241 6.5E-30 T 22-04-2016 YPTB_RS02855 0edb98d072f2308c34204ae3e873bd97 672 Pfam PF07940 Heparinase II/III-like protein 368 513 8.7E-19 T 22-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 YPTB_RS02855 0edb98d072f2308c34204ae3e873bd97 672 SUPERFAMILY SSF48230 13 328 3.2E-35 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPTB_RS02855 0edb98d072f2308c34204ae3e873bd97 672 Pfam PF05426 Alginate lyase 101 267 1.1E-4 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPTB_RS02855 0edb98d072f2308c34204ae3e873bd97 672 Gene3D G3DSA:1.50.10.110 97 344 1.0E-16 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPTB_RS01190 a28cc7c26b69dea1ae8422ab35610ed2 276 Gene3D G3DSA:3.20.20.70 1 252 5.7E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS01190 a28cc7c26b69dea1ae8422ab35610ed2 276 PANTHER PTHR31862 14 276 2.7E-110 T 22-04-2016 YPTB_RS01190 a28cc7c26b69dea1ae8422ab35610ed2 276 SUPERFAMILY SSF51621 3 197 3.77E-85 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS01190 a28cc7c26b69dea1ae8422ab35610ed2 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 1.1E-133 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like YPTB_RS01190 a28cc7c26b69dea1ae8422ab35610ed2 276 Gene3D G3DSA:1.20.5.460 253 276 0.001 T 22-04-2016 YPTB_RS01190 a28cc7c26b69dea1ae8422ab35610ed2 276 PIRSF PIRSF034452 1 276 9.5E-167 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.18 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 Gene3D G3DSA:3.40.1190.20 241 499 2.3E-91 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 21.456 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 219 8.1E-49 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 499 8.2E-81 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 Pfam PF01256 Carbohydrate kinase 258 495 1.0E-67 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 Gene3D G3DSA:3.40.50.10260 15 240 1.3E-64 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 PANTHER PTHR12592:SF0 6 504 5.3E-155 T 22-04-2016 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 SUPERFAMILY SSF64153 16 256 3.53E-60 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 PANTHER PTHR12592 6 504 5.3E-155 T 22-04-2016 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 SUPERFAMILY SSF53613 232 499 3.47E-76 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 Pfam PF03853 YjeF-related protein N-terminus 40 199 6.0E-39 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPTB_RS02435 bd1df3a17787b3cd7653268deaaa87fb 504 PIRSF PIRSF017184 15 504 6.9E-141 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.064 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 PANTHER PTHR33867:SF1 1 150 7.5E-59 T 22-04-2016 YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 Gene3D G3DSA:3.30.300.70 2 79 9.6E-33 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 Gene3D G3DSA:2.30.30.180 87 147 1.2E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 SUPERFAMILY SSF75420 3 82 1.7E-24 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 Pfam PF02576 Putative ribosome maturation factor RimP 11 146 1.6E-48 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 SUPERFAMILY SSF74942 83 150 1.22E-16 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal YPTB_RS02740 8a1dd549e4f934150cdac4c7132a5caa 150 PANTHER PTHR33867 1 150 7.5E-59 T 22-04-2016 YPTB_RS12815 61658c4b0522d65c1f618cee69f377a1 184 Pfam PF14002 YniB-like protein 15 179 4.3E-80 T 22-04-2016 IPR025229 YniB-like protein YPTB_RS12815 61658c4b0522d65c1f618cee69f377a1 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 181 1.0E-101 T 22-04-2016 YPTB_RS09020 6c5cc686bbb8077a24033660da0eac63 155 SUPERFAMILY SSF46785 4 138 1.34E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS09020 6c5cc686bbb8077a24033660da0eac63 155 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 1.2E-54 T 22-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 YPTB_RS09020 6c5cc686bbb8077a24033660da0eac63 155 Gene3D G3DSA:1.10.10.10 3 132 2.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS09020 6c5cc686bbb8077a24033660da0eac63 155 PANTHER PTHR33164 1 146 5.0E-92 T 22-04-2016 YPTB_RS09020 6c5cc686bbb8077a24033660da0eac63 155 SMART SM00347 22 122 1.3E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS09020 6c5cc686bbb8077a24033660da0eac63 155 PANTHER PTHR33164:SF13 1 146 5.0E-92 T 22-04-2016 YPTB_RS09020 6c5cc686bbb8077a24033660da0eac63 155 Pfam PF01047 MarR family 29 86 1.8E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 Gene3D G3DSA:3.30.450.20 134 269 1.9E-23 T 22-04-2016 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 Gene3D G3DSA:1.10.287.950 362 566 4.8E-56 T 22-04-2016 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 SMART SM00283 347 594 1.4E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 SUPERFAMILY SSF58104 314 595 2.75E-70 T 22-04-2016 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 PANTHER PTHR32089:SF63 89 595 1.4E-244 T 22-04-2016 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 Pfam PF00672 HAMP domain 273 341 8.7E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 Pfam PF02743 Cache domain 45 254 5.8E-26 T 22-04-2016 IPR033479 Double Cache domain 1 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 SUPERFAMILY SSF103190 64 177 7.85E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 SMART SM00304 292 346 5.6E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 404 593 2.0E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS07005 00d98657f2c7b6cae630dc12fc02e46f 595 PANTHER PTHR32089 89 595 1.4E-244 T 22-04-2016 YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 5.5E-35 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 Gene3D G3DSA:3.55.50.10 112 205 5.2E-30 T 22-04-2016 YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 SUPERFAMILY SSF69255 382 471 1.2E-25 T 22-04-2016 YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 515 4.9E-74 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 Gene3D G3DSA:4.10.180.10 297 312 3.1E-7 T 22-04-2016 IPR027440 Capsid protein alpha-like domain YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 SUPERFAMILY SSF69279 204 383 1.7E-50 T 22-04-2016 YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 PANTHER PTHR32305:SF7 31 782 0.0 T 22-04-2016 YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 PANTHER PTHR32305 31 782 0.0 T 22-04-2016 YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 Pfam PF05954 Phage late control gene D protein (GPD) 34 355 1.3E-64 T 22-04-2016 YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 2.5E-184 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 751 3.8E-51 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 Gene3D G3DSA:2.40.50.230 390 470 2.0E-25 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS17575 d36146ddadb574246c82f4c2ec55115a 782 SUPERFAMILY SSF69279 22 203 4.48E-48 T 22-04-2016 YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 SMART SM00855 3 157 2.4E-23 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 Gene3D G3DSA:3.40.50.1240 2 208 7.7E-62 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 SUPERFAMILY SSF53254 1 209 4.06E-58 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 PANTHER PTHR23029 1 215 2.9E-162 T 22-04-2016 YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 PANTHER PTHR23029:SF53 1 215 2.9E-162 T 22-04-2016 YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 51.058 T 22-04-2016 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 UniPathway: UPA00109 YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.1E-58 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB_RS03375 66ceb75f8fd65fc058d46a72ec56d96a 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 YPTB_RS20380 3a20f28cb95ef93f9fe10c53676daffb 85 Gene3D G3DSA:1.10.10.10 10 55 5.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20380 3a20f28cb95ef93f9fe10c53676daffb 85 Hamap MF_01586 Ferrous iron transport protein C [feoC]. 1 79 30.156 T 22-04-2016 IPR023732 Probable [Fe-S]-dependent transcriptional repressor YPTB_RS20380 3a20f28cb95ef93f9fe10c53676daffb 85 SUPERFAMILY SSF46785 1 75 7.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20380 3a20f28cb95ef93f9fe10c53676daffb 85 Pfam PF09012 FeoC like transcriptional regulator 3 77 1.1E-19 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC YPTB_RS16745 2ebb4c009de3b6708fc8fab998b43a70 419 Gene3D G3DSA:2.40.170.10 26 419 2.8E-119 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPTB_RS16745 2ebb4c009de3b6708fc8fab998b43a70 419 SUPERFAMILY SSF56935 27 419 2.44E-109 T 22-04-2016 YPTB_RS16745 2ebb4c009de3b6708fc8fab998b43a70 419 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 34 414 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPTB_RS16745 2ebb4c009de3b6708fc8fab998b43a70 419 PANTHER PTHR38762 1 419 4.9E-204 T 22-04-2016 YPTB_RS16745 2ebb4c009de3b6708fc8fab998b43a70 419 Hamap MF_01301 Maltoporin [lamB]. 2 419 44.712 T 22-04-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 YPTB_RS16745 2ebb4c009de3b6708fc8fab998b43a70 419 Pfam PF02264 LamB porin 29 419 6.7E-107 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPTB_RS16505 57d9061cc481929422c9cf91c7e35c75 386 PANTHER PTHR23501:SF4 1 385 1.3E-176 T 22-04-2016 YPTB_RS16505 57d9061cc481929422c9cf91c7e35c75 386 PANTHER PTHR23501 1 385 1.3E-176 T 22-04-2016 YPTB_RS16505 57d9061cc481929422c9cf91c7e35c75 386 Gene3D G3DSA:1.20.1250.20 5 188 4.2E-31 T 22-04-2016 YPTB_RS16505 57d9061cc481929422c9cf91c7e35c75 386 Gene3D G3DSA:1.20.1250.20 201 375 1.1E-10 T 22-04-2016 YPTB_RS16505 57d9061cc481929422c9cf91c7e35c75 386 SUPERFAMILY SSF103473 3 378 4.05E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS16505 57d9061cc481929422c9cf91c7e35c75 386 Pfam PF07690 Major Facilitator Superfamily 8 313 1.4E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS06820 b4f2106264b16a0d815fdf170d09da2f 232 SMART SM00382 26 211 9.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06820 b4f2106264b16a0d815fdf170d09da2f 232 PANTHER PTHR24220:SF404 3 232 7.5E-139 T 22-04-2016 YPTB_RS06820 b4f2106264b16a0d815fdf170d09da2f 232 PANTHER PTHR24220 3 232 7.5E-139 T 22-04-2016 YPTB_RS06820 b4f2106264b16a0d815fdf170d09da2f 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 1.1E-106 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YPTB_RS06820 b4f2106264b16a0d815fdf170d09da2f 232 Pfam PF00005 ABC transporter 17 161 3.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06820 b4f2106264b16a0d815fdf170d09da2f 232 Gene3D G3DSA:3.40.50.300 1 216 4.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06820 b4f2106264b16a0d815fdf170d09da2f 232 SUPERFAMILY SSF52540 2 216 4.42E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01570 be3f866ea3256aad93926d701766fb6d 177 Gene3D G3DSA:3.40.50.360 2 72 1.7E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS01570 be3f866ea3256aad93926d701766fb6d 177 Gene3D G3DSA:3.40.50.360 104 174 1.7E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS01570 be3f866ea3256aad93926d701766fb6d 177 Pfam PF12724 Flavodoxin domain 4 151 1.2E-56 T 22-04-2016 IPR026816 Flavodoxin domain YPTB_RS01570 be3f866ea3256aad93926d701766fb6d 177 PANTHER PTHR38030:SF2 1 173 1.3E-108 T 22-04-2016 YPTB_RS01570 be3f866ea3256aad93926d701766fb6d 177 PANTHER PTHR38030 1 173 1.3E-108 T 22-04-2016 YPTB_RS01570 be3f866ea3256aad93926d701766fb6d 177 SUPERFAMILY SSF52218 1 169 5.9E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS01570 be3f866ea3256aad93926d701766fb6d 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Gene3D G3DSA:3.30.420.80 9 129 1.2E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 SUPERFAMILY SSF53137 15 129 4.58E-48 T 22-04-2016 YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.735 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.8E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 PIRSF PIRSF002131 1 129 1.1E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19900 c1ca87aaced6c0e7222f5c1f70ff2d28 129 PANTHER PTHR11759 11 129 9.3E-74 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPTB_RS14480 c8370417cda604aa709d188bb849b7d3 626 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 623 6.2E-201 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS14480 c8370417cda604aa709d188bb849b7d3 626 PIRSF PIRSF028304 1 626 2.9E-157 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS14480 c8370417cda604aa709d188bb849b7d3 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 1.3E-196 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPTB_RS14480 c8370417cda604aa709d188bb849b7d3 626 PANTHER PTHR35370 2 626 0.0 T 22-04-2016 YPTB_RS14480 c8370417cda604aa709d188bb849b7d3 626 PANTHER PTHR35370:SF2 2 626 0.0 T 22-04-2016 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 PANTHER PTHR11907:SF0 1 480 3.9E-264 T 22-04-2016 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 Pfam PF00156 Phosphoribosyl transferase domain 294 394 5.7E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.771 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.0E-161 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 PIRSF PIRSF000485 1 483 1.2E-169 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 SUPERFAMILY SSF53271 252 485 1.31E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 PANTHER PTHR11907 1 480 3.9E-264 T 22-04-2016 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 Gene3D G3DSA:3.60.20.10 2 260 4.2E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 4.6E-15 T 22-04-2016 YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 SUPERFAMILY SSF56235 2 259 1.2E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB_RS14165 706aabb44dd3580870f752a38ad7d061 505 Gene3D G3DSA:3.40.50.2020 275 446 9.4E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS03925 ad570b838904cb7e5987d86ead747e07 250 Gene3D G3DSA:1.10.3900.10 16 176 3.5E-65 T 22-04-2016 YPTB_RS03925 ad570b838904cb7e5987d86ead747e07 250 Pfam PF07072 Protein of unknown function (DUF1342) 22 228 1.9E-78 T 22-04-2016 IPR009777 Cell division protein ZapD YPTB_RS03925 ad570b838904cb7e5987d86ead747e07 250 SUPERFAMILY SSF160950 6 250 1.01E-91 T 22-04-2016 YPTB_RS03925 ad570b838904cb7e5987d86ead747e07 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.807 T 22-04-2016 IPR009777 Cell division protein ZapD YPTB_RS03925 ad570b838904cb7e5987d86ead747e07 250 PANTHER PTHR39455:SF1 4 250 1.3E-124 T 22-04-2016 YPTB_RS03925 ad570b838904cb7e5987d86ead747e07 250 PANTHER PTHR39455 4 250 1.3E-124 T 22-04-2016 YPTB_RS03925 ad570b838904cb7e5987d86ead747e07 250 Gene3D G3DSA:2.60.440.10 177 250 3.3E-32 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 SUPERFAMILY SSF111369 53 301 1.96E-86 T 22-04-2016 YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 9.8E-80 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 294 8.0E-10 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 81 361 5.7E-11 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 PANTHER PTHR30158 1 386 4.3E-203 T 22-04-2016 YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:2.40.50.100 66 99 8.7E-23 T 22-04-2016 YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:2.40.50.100 174 209 8.7E-23 T 22-04-2016 YPTB_RS05440 c3068fda8dc1e0af4926ffe0b3c9344b 395 PANTHER PTHR30158:SF3 1 386 4.3E-203 T 22-04-2016 YPTB_RS09390 52695dc325caef3fc0145fcc007a8168 203 PANTHER PTHR10242 7 197 4.5E-56 T 22-04-2016 YPTB_RS09390 52695dc325caef3fc0145fcc007a8168 203 PANTHER PTHR10242:SF0 7 197 4.5E-56 T 22-04-2016 YPTB_RS09390 52695dc325caef3fc0145fcc007a8168 203 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 181 1.0E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPTB_RS09390 52695dc325caef3fc0145fcc007a8168 203 Gene3D G3DSA:1.10.1670.10 147 198 2.8E-6 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPTB_RS09390 52695dc325caef3fc0145fcc007a8168 203 SMART SM00478 49 201 5.5E-4 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPTB_RS09390 52695dc325caef3fc0145fcc007a8168 203 SUPERFAMILY SSF48150 35 198 1.64E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS09390 52695dc325caef3fc0145fcc007a8168 203 Gene3D G3DSA:1.10.340.30 39 145 2.3E-26 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF00805 Pentapeptide repeats (8 copies) 291 321 0.0027 T 22-04-2016 IPR001646 Pentapeptide repeat YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 Gene3D G3DSA:2.160.20.10 34 163 3.5E-7 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 Gene3D G3DSA:2.160.20.10 211 231 3.5E-7 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 PANTHER PTHR14136:SF0 5 367 2.2E-111 T 22-04-2016 YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF13599 Pentapeptide repeats (9 copies) 212 276 2.0E-11 T 22-04-2016 IPR001646 Pentapeptide repeat YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF13599 Pentapeptide repeats (9 copies) 37 121 2.6E-9 T 22-04-2016 IPR001646 Pentapeptide repeat YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 SUPERFAMILY SSF141571 16 169 5.76E-21 T 22-04-2016 YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 PANTHER PTHR14136 5 367 2.2E-111 T 22-04-2016 YPTB_RS03640 af74e2decb98b6b1a002a5ae5f90b07b 367 SUPERFAMILY SSF141571 157 325 7.26E-35 T 22-04-2016 YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 PIRSF PIRSF004553 22 202 2.9E-59 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 Pfam PF03602 Conserved hypothetical protein 95 23 198 5.2E-62 T 22-04-2016 YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 135 141 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 SUPERFAMILY SSF53335 22 199 5.58E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 PANTHER PTHR18895:SF60 22 213 4.8E-59 T 22-04-2016 YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 Gene3D G3DSA:3.40.50.150 15 202 4.8E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 18 200 1.0E-64 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS01310 5d22a5a7c78f6a589c9a3faa81d109e8 220 PANTHER PTHR18895 22 213 4.8E-59 T 22-04-2016 YPTB_RS16640 772cc0f652d48b3249abbdf9b6baea33 517 Gene3D G3DSA:3.30.1120.10 427 511 1.1E-19 T 22-04-2016 YPTB_RS16640 772cc0f652d48b3249abbdf9b6baea33 517 Gene3D G3DSA:3.40.720.10 41 415 3.0E-82 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS16640 772cc0f652d48b3249abbdf9b6baea33 517 PANTHER PTHR10342:SF238 16 508 1.3E-202 T 22-04-2016 YPTB_RS16640 772cc0f652d48b3249abbdf9b6baea33 517 Pfam PF00884 Sulfatase 44 396 7.0E-55 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPTB_RS16640 772cc0f652d48b3249abbdf9b6baea33 517 PANTHER PTHR10342 16 508 1.3E-202 T 22-04-2016 YPTB_RS16640 772cc0f652d48b3249abbdf9b6baea33 517 SUPERFAMILY SSF53649 42 505 7.72E-97 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 PIRSF PIRSF000446 2 282 3.0E-68 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF52151 6 126 1.26E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF52151 192 282 1.26E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 Pfam PF00698 Acyl transferase domain 8 231 1.9E-18 T 22-04-2016 IPR014043 Acyl transferase YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 PANTHER PTHR10982 1 281 1.4E-106 T 22-04-2016 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 PANTHER PTHR10982:SF15 1 281 1.4E-106 T 22-04-2016 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 281 2.1E-16 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.40.366.10 191 282 1.4E-49 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.40.366.10 4 120 1.4E-49 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF55048 124 191 4.05E-12 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YPTB_RS08165 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.30.70.250 123 190 1.5E-16 T 22-04-2016 YPTB_RS15900 8eec57ebe472f595c5912a7e523754e9 220 PANTHER PTHR31715 8 220 3.1E-117 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YPTB_RS15900 8eec57ebe472f595c5912a7e523754e9 220 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 13 209 6.6E-79 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YPTB_RS15900 8eec57ebe472f595c5912a7e523754e9 220 PIRSF PIRSF005624 2 217 2.1E-47 T 22-04-2016 YPTB_RS15900 8eec57ebe472f595c5912a7e523754e9 220 Hamap MF_01389 Urease accessory protein UreG [ureG]. 10 211 45.13 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YPTB_RS15900 8eec57ebe472f595c5912a7e523754e9 220 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 14 185 2.0E-30 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPTB_RS15900 8eec57ebe472f595c5912a7e523754e9 220 Gene3D G3DSA:3.40.50.300 10 204 2.6E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15900 8eec57ebe472f595c5912a7e523754e9 220 SUPERFAMILY SSF52540 8 206 2.18E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16240 884eb179a33cfe769963dc2d44f6206a 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.659 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YPTB_RS16240 884eb179a33cfe769963dc2d44f6206a 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.5E-79 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YPTB_RS16240 884eb179a33cfe769963dc2d44f6206a 185 Pfam PF01765 Ribosome recycling factor 20 183 8.7E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain YPTB_RS16240 884eb179a33cfe769963dc2d44f6206a 185 SUPERFAMILY SSF55194 2 184 4.19E-70 T 22-04-2016 IPR023584 Ribosome recycling factor domain YPTB_RS16240 884eb179a33cfe769963dc2d44f6206a 185 PANTHER PTHR20982 1 185 8.2E-82 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YPTB_RS16240 884eb179a33cfe769963dc2d44f6206a 185 Gene3D G3DSA:1.10.132.20 67 184 1.0E-43 T 22-04-2016 IPR023584 Ribosome recycling factor domain YPTB_RS18415 b59d4a901e6322f43b5056d27fb2dbf7 416 Pfam PF13520 Amino acid permease 8 412 5.1E-31 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS18415 b59d4a901e6322f43b5056d27fb2dbf7 416 PIRSF PIRSF006060 1 414 2.8E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS18415 b59d4a901e6322f43b5056d27fb2dbf7 416 PANTHER PTHR11785:SF415 3 416 3.9E-161 T 22-04-2016 YPTB_RS18415 b59d4a901e6322f43b5056d27fb2dbf7 416 PANTHER PTHR11785 3 416 3.9E-161 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS19990 f8dac1c557d023b0b5dfdfbd193dce1b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19990 f8dac1c557d023b0b5dfdfbd193dce1b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.5E-50 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19990 f8dac1c557d023b0b5dfdfbd193dce1b 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 7.1E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19990 f8dac1c557d023b0b5dfdfbd193dce1b 110 PANTHER PTHR13501 1 109 4.7E-53 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19990 f8dac1c557d023b0b5dfdfbd193dce1b 110 Gene3D G3DSA:3.90.470.10 1 109 6.5E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YPTB_RS19990 f8dac1c557d023b0b5dfdfbd193dce1b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.807 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19990 f8dac1c557d023b0b5dfdfbd193dce1b 110 SUPERFAMILY SSF54843 1 109 1.57E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YPTB_RS16475 31d25d69b71ca753a7d3f8fe136040e1 406 PANTHER PTHR23513:SF8 1 406 1.3E-217 T 22-04-2016 YPTB_RS16475 31d25d69b71ca753a7d3f8fe136040e1 406 PANTHER PTHR23513 1 406 1.3E-217 T 22-04-2016 YPTB_RS16475 31d25d69b71ca753a7d3f8fe136040e1 406 Gene3D G3DSA:1.20.1250.20 14 188 3.2E-13 T 22-04-2016 YPTB_RS16475 31d25d69b71ca753a7d3f8fe136040e1 406 Pfam PF07690 Major Facilitator Superfamily 19 343 4.4E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS16475 31d25d69b71ca753a7d3f8fe136040e1 406 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 44.294 T 22-04-2016 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 YPTB_RS16475 31d25d69b71ca753a7d3f8fe136040e1 406 Gene3D G3DSA:1.20.1250.20 210 403 6.1E-4 T 22-04-2016 YPTB_RS16475 31d25d69b71ca753a7d3f8fe136040e1 406 SUPERFAMILY SSF103473 14 401 1.57E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:1.10.2020.10 46 137 6.8E-42 T 22-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 48.974 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 PANTHER PTHR30068 2 469 0.0 T 22-04-2016 YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:3.20.20.140 3 44 2.9E-162 T 22-04-2016 YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:3.20.20.140 139 466 2.9E-162 T 22-04-2016 YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 PANTHER PTHR30068:SF4 2 469 0.0 T 22-04-2016 YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 SUPERFAMILY SSF51556 3 465 4.76E-179 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS18825 ef4e497b385551a2704cf5018066c8d3 469 Pfam PF02614 Glucuronate isomerase 1 465 6.0E-225 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YPTB_RS10365 c86a7d095ee62c8cbf4f3c4d1f710985 160 Pfam PF01527 Transposase 60 129 3.1E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPTB_RS10365 c86a7d095ee62c8cbf4f3c4d1f710985 160 Pfam PF01527 Transposase 5 54 3.0E-6 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPTB_RS10365 c86a7d095ee62c8cbf4f3c4d1f710985 160 SUPERFAMILY SSF46689 2 66 3.4E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS10365 c86a7d095ee62c8cbf4f3c4d1f710985 160 Gene3D G3DSA:1.10.10.60 6 59 1.6E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS10365 c86a7d095ee62c8cbf4f3c4d1f710985 160 Gene3D G3DSA:1.10.10.10 60 105 3.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13570 1b36ea2ba9c37ab72983b1ddde453039 308 PANTHER PTHR32322 3 307 6.6E-75 T 22-04-2016 YPTB_RS13570 1b36ea2ba9c37ab72983b1ddde453039 308 SUPERFAMILY SSF103481 203 303 2.35E-10 T 22-04-2016 YPTB_RS13570 1b36ea2ba9c37ab72983b1ddde453039 308 PANTHER PTHR32322:SF9 3 307 6.6E-75 T 22-04-2016 YPTB_RS13570 1b36ea2ba9c37ab72983b1ddde453039 308 SUPERFAMILY SSF103481 55 159 4.58E-15 T 22-04-2016 YPTB_RS13570 1b36ea2ba9c37ab72983b1ddde453039 308 Pfam PF00892 EamA-like transporter family 20 156 4.5E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS13570 1b36ea2ba9c37ab72983b1ddde453039 308 Pfam PF00892 EamA-like transporter family 170 303 3.0E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 SUPERFAMILY SSF52172 12 189 3.84E-40 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 6.8E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 PANTHER PTHR26402 12 235 1.3E-133 T 22-04-2016 YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 Gene3D G3DSA:1.10.10.10 139 234 6.6E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 SMART SM00862 155 231 6.9E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 Pfam PF00072 Response regulator receiver domain 14 122 6.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 PANTHER PTHR26402:SF530 12 235 1.3E-133 T 22-04-2016 YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 Gene3D G3DSA:3.40.50.2300 11 135 4.3E-39 T 22-04-2016 YPTB_RS15250 39364e9324ee858f2e14c4f1e40c8b29 239 SMART SM00448 12 122 3.7E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 SUPERFAMILY SSF52313 6 236 7.85E-97 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:1.10.287.610 100 152 1.2E-26 T 22-04-2016 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.585 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:3.40.50.10490 23 99 7.0E-69 T 22-04-2016 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:3.40.50.10490 158 236 7.0E-69 T 22-04-2016 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 PANTHER PTHR12534 1 235 9.6E-126 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 4.8E-108 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YPTB_RS16255 2b0c889592ff59239bc3e65502a737b1 241 Pfam PF00318 Ribosomal protein S2 9 224 2.4E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS06120 19ef16333a1b9d9ff2f2d44b21e805bd 351 PANTHER PTHR30473 1 344 3.4E-213 T 22-04-2016 YPTB_RS06120 19ef16333a1b9d9ff2f2d44b21e805bd 351 PANTHER PTHR30473:SF1 1 344 3.4E-213 T 22-04-2016 YPTB_RS06120 19ef16333a1b9d9ff2f2d44b21e805bd 351 SUPERFAMILY SSF52540 117 293 2.57E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06120 19ef16333a1b9d9ff2f2d44b21e805bd 351 Gene3D G3DSA:3.40.50.300 118 321 2.3E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06120 19ef16333a1b9d9ff2f2d44b21e805bd 351 Pfam PF02562 PhoH-like protein 118 321 7.2E-95 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 YPTB_RS15020 7e0024cf17ada08807df3b79f2191fd5 362 Gene3D G3DSA:3.40.190.10 142 282 8.4E-57 T 22-04-2016 YPTB_RS15020 7e0024cf17ada08807df3b79f2191fd5 362 Pfam PF13416 Bacterial extracellular solute-binding protein 59 319 2.9E-22 T 22-04-2016 YPTB_RS15020 7e0024cf17ada08807df3b79f2191fd5 362 PANTHER PTHR30006 1 361 1.1E-153 T 22-04-2016 YPTB_RS15020 7e0024cf17ada08807df3b79f2191fd5 362 Gene3D G3DSA:3.40.190.10 283 357 6.2E-60 T 22-04-2016 YPTB_RS15020 7e0024cf17ada08807df3b79f2191fd5 362 Gene3D G3DSA:3.40.190.10 3 141 6.2E-60 T 22-04-2016 YPTB_RS15020 7e0024cf17ada08807df3b79f2191fd5 362 SUPERFAMILY SSF53850 40 339 4.43E-52 T 22-04-2016 YPTB_RS15020 7e0024cf17ada08807df3b79f2191fd5 362 PANTHER PTHR30006:SF10 1 361 1.1E-153 T 22-04-2016 YPTB_RS10900 1c7e7e34f45d54709f046cda2751cde8 301 SUPERFAMILY SSF48371 201 291 4.41E-6 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 YPTB_RS10900 1c7e7e34f45d54709f046cda2751cde8 301 Pfam PF13646 HEAT repeats 222 292 2.3E-9 T 22-04-2016 YPTB_RS10900 1c7e7e34f45d54709f046cda2751cde8 301 Gene3D G3DSA:1.25.10.10 204 292 8.3E-7 T 22-04-2016 IPR011989 Armadillo-like helical YPTB_RS05005 acc40e1a6bccb295fde929e959827058 152 Gene3D G3DSA:3.40.50.2020 1 145 4.7E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS05005 acc40e1a6bccb295fde929e959827058 152 PANTHER PTHR39563 2 152 6.9E-118 T 22-04-2016 YPTB_RS05005 acc40e1a6bccb295fde929e959827058 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.845 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 YPTB_RS05005 acc40e1a6bccb295fde929e959827058 152 Pfam PF00156 Phosphoribosyl transferase domain 11 145 1.6E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPTB_RS05005 acc40e1a6bccb295fde929e959827058 152 SUPERFAMILY SSF53271 4 144 2.1E-31 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 PANTHER PTHR30006 8 334 2.1E-129 T 22-04-2016 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 Gene3D G3DSA:3.40.190.10 132 270 4.6E-54 T 22-04-2016 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 Pfam PF13343 Bacterial extracellular solute-binding protein 81 309 1.3E-27 T 22-04-2016 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 Gene3D G3DSA:3.40.190.10 11 127 7.3E-27 T 22-04-2016 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 Gene3D G3DSA:3.40.190.10 271 313 7.3E-27 T 22-04-2016 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 PANTHER PTHR30006:SF6 8 334 2.1E-129 T 22-04-2016 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 SUPERFAMILY SSF53850 33 332 2.91E-72 T 22-04-2016 YPTB_RS14530 3c35022bd8d16f8695591b07bb9ba105 339 PIRSF PIRSF002825 7 339 3.2E-80 T 22-04-2016 IPR026045 Ferric binding protein YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 Gene3D G3DSA:3.40.1410.10 102 238 6.2E-50 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 249 1.1E-107 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 SUPERFAMILY SSF46785 19 88 1.51E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 PANTHER PTHR11751 17 108 7.7E-46 T 22-04-2016 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 Gene3D G3DSA:1.10.10.10 18 90 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 Pfam PF07702 UTRA domain 105 242 1.5E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 SMART SM00866 105 242 4.2E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 PANTHER PTHR11751:SF364 17 108 7.7E-46 T 22-04-2016 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 SMART SM00345 25 84 2.1E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 SUPERFAMILY SSF64288 72 248 1.29E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPTB_RS10790 14351f3247823fcb1c4271129ce38344 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 2.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS17440 fd3fd4f350c0ff68d404b9e56f751549 244 Pfam PF11101 Protein of unknown function (DUF2884) 29 242 2.9E-45 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 YPTB_RS20980 1bd5f232f4e1a55845fa984f95b2daa9 214 SUPERFAMILY SSF53098 2 210 5.46E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS20980 1bd5f232f4e1a55845fa984f95b2daa9 214 Gene3D G3DSA:3.90.350.10 173 210 6.9E-5 T 22-04-2016 IPR014736 Transposase, Tn5-like, core YPTB_RS20980 1bd5f232f4e1a55845fa984f95b2daa9 214 PANTHER PTHR35404:SF2 1 212 1.7E-194 T 22-04-2016 YPTB_RS20980 1bd5f232f4e1a55845fa984f95b2daa9 214 Pfam PF01609 Transposase DDE domain 2 210 1.7E-23 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YPTB_RS20980 1bd5f232f4e1a55845fa984f95b2daa9 214 PANTHER PTHR35404 1 212 1.7E-194 T 22-04-2016 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 270 1.8E-41 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 TIGRFAM TIGR00492 alr: alanine racemase 44 393 5.5E-63 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 Gene3D G3DSA:2.40.37.10 262 408 2.4E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 SUPERFAMILY SSF50621 275 408 1.12E-40 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 Gene3D G3DSA:3.20.20.10 53 261 3.1E-41 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 SMART SM01005 280 408 4.8E-48 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PANTHER PTHR30511:SF0 39 409 2.4E-130 T 22-04-2016 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 Pfam PF00842 Alanine racemase, C-terminal domain 280 396 4.9E-29 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 SUPERFAMILY SSF51419 49 280 2.04E-41 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PRINTS PR00992 Alanine racemase signature 313 328 9.1E-23 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PRINTS PR00992 Alanine racemase signature 245 272 9.1E-23 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PRINTS PR00992 Alanine racemase signature 202 213 9.1E-23 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PRINTS PR00992 Alanine racemase signature 334 351 9.1E-23 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PRINTS PR00992 Alanine racemase signature 166 178 9.1E-23 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PRINTS PR00992 Alanine racemase signature 68 84 9.1E-23 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 Hamap MF_01201 Alanine racemase. 42 408 24.47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS13015 40780c9e11ae6c8b1cf321dac1998e7c 409 PANTHER PTHR30511 39 409 2.4E-130 T 22-04-2016 YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 SMART SM00729 52 272 3.7E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 Pfam PF04055 Radical SAM superfamily 57 226 3.0E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 Pfam PF06969 HemN C-terminal domain 364 431 1.6E-11 T 22-04-2016 IPR010723 HemN, C-terminal YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 PANTHER PTHR13932:SF6 1 451 5.5E-269 T 22-04-2016 YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 PANTHER PTHR13932 1 451 5.5E-269 T 22-04-2016 YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 Gene3D G3DSA:3.80.30.20 53 276 4.5E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 PIRSF PIRSF000167 4 454 5.3E-174 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 7.6E-219 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 YPTB_RS00200 81b28954565799b38ad25cc3f949d446 457 SUPERFAMILY SSF102114 6 444 7.98E-146 T 22-04-2016 YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 SUPERFAMILY SSF52540 324 572 1.31E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 Gene3D G3DSA:1.20.1560.10 7 319 3.4E-71 T 22-04-2016 YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 Gene3D G3DSA:3.40.50.300 341 565 2.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 PANTHER PTHR24221 2 580 3.7E-191 T 22-04-2016 YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 Pfam PF00005 ABC transporter 352 500 2.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 SMART SM00382 361 547 2.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 Pfam PF00664 ABC transporter transmembrane region 21 291 3.0E-39 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 SUPERFAMILY SSF90123 7 319 6.41E-72 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS05375 1b1e2c4a205a0614b04945bf1ffbf585 588 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 SMART SM01382 124 251 1.3E-89 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 SMART SM01383 42 118 3.6E-48 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:2.40.50.140 1 114 3.5E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:2.30.30.30 119 195 1.0E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 1.6E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:4.10.950.10 196 272 5.8E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 SUPERFAMILY SSF50104 127 269 1.14E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 PIRSF PIRSF002158 12 274 1.5E-100 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.8E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.315 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 SUPERFAMILY SSF50249 2 125 1.1E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 8.0E-132 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YPTB_RS20000 80a4a136f9f763c7081cd668dd447c61 274 PANTHER PTHR13691 1 273 8.9E-150 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS14265 f0c938a8b095efaba2e4eec93c3d5de5 275 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 273 62.629 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YPTB_RS14265 f0c938a8b095efaba2e4eec93c3d5de5 275 Gene3D G3DSA:3.30.1380.10 21 271 2.6E-105 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS14265 f0c938a8b095efaba2e4eec93c3d5de5 275 PIRSF PIRSF018455 3 275 7.4E-119 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YPTB_RS14265 f0c938a8b095efaba2e4eec93c3d5de5 275 SUPERFAMILY SSF55166 21 271 4.08E-100 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS14265 f0c938a8b095efaba2e4eec93c3d5de5 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 269 5.6E-95 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YPTB_RS20960 79a0e5f17c40e26d5aa4ca50681084e8 348 Pfam PF13310 Virulence protein RhuM family 70 322 2.5E-115 T 22-04-2016 IPR011204 Virulence protein RhuM-like YPTB_RS20960 79a0e5f17c40e26d5aa4ca50681084e8 348 PANTHER PTHR35810 5 345 2.9E-193 T 22-04-2016 YPTB_RS20960 79a0e5f17c40e26d5aa4ca50681084e8 348 PIRSF PIRSF015268 4 347 2.0E-154 T 22-04-2016 IPR011204 Virulence protein RhuM-like YPTB_RS20960 79a0e5f17c40e26d5aa4ca50681084e8 348 PANTHER PTHR35810:SF1 5 345 2.9E-193 T 22-04-2016 YPTB_RS14415 af213a5d90f3e235464913e94003e5b1 1275 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 72 1267 5.6E-244 T 22-04-2016 IPR017731 Type VI secretion system, IcmF YPTB_RS14415 af213a5d90f3e235464913e94003e5b1 1275 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1024 1215 3.1E-45 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPTB_RS14415 af213a5d90f3e235464913e94003e5b1 1275 PANTHER PTHR36153:SF3 46 1273 0.0 T 22-04-2016 YPTB_RS14415 af213a5d90f3e235464913e94003e5b1 1275 Pfam PF14331 ImcF-related N-terminal domain 253 535 6.3E-75 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain YPTB_RS14415 af213a5d90f3e235464913e94003e5b1 1275 Pfam PF06761 Intracellular multiplication and human macrophage-killing 586 898 6.0E-68 T 22-04-2016 IPR009612 ImcF-related YPTB_RS14415 af213a5d90f3e235464913e94003e5b1 1275 PANTHER PTHR36153 46 1273 0.0 T 22-04-2016 YPTB_RS14415 af213a5d90f3e235464913e94003e5b1 1275 SUPERFAMILY SSF52540 185 358 2.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08600 e1d7a3da24dac2925053ba157a96ed51 144 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 54 135 4.7E-14 T 22-04-2016 IPR032032 Type VI secretion system (T6SS), amidase immunity protein YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 SMART SM00849 514 698 6.3E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 PANTHER PTHR30619 8 758 1.2E-266 T 22-04-2016 YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 72 727 3.3E-182 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 SUPERFAMILY SSF56281 505 751 1.7E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 Pfam PF00753 Metallo-beta-lactamase superfamily 514 690 1.5E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 Pfam PF13567 Domain of unknown function (DUF4131) 16 162 1.2E-11 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 Gene3D G3DSA:3.60.15.10 497 718 1.8E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 413 8.1E-38 T 22-04-2016 IPR004477 ComEC/Rec2-related protein YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 Pfam PF03772 Competence protein 209 477 4.7E-52 T 22-04-2016 IPR004477 ComEC/Rec2-related protein YPTB_RS07830 4cd6a69c1e6ce3fc8cce35fe258b3510 763 PANTHER PTHR30619:SF2 8 758 1.2E-266 T 22-04-2016 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Pfam PF03483 B3/4 domain 212 385 1.3E-71 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Gene3D G3DSA:3.30.56.20 402 475 2.3E-28 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SUPERFAMILY SSF55681 467 690 8.95E-56 T 22-04-2016 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SMART SM00896 701 794 4.1E-45 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 PANTHER PTHR10947:SF0 2 794 0.0 T 22-04-2016 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SMART SM00874 403 471 1.5E-31 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.401 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SUPERFAMILY SSF56037 196 394 8.63E-78 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 PANTHER PTHR10947 2 794 0.0 T 22-04-2016 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.1E-27 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Gene3D G3DSA:3.30.70.380 703 794 2.9E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Gene3D G3DSA:3.50.40.10 198 392 7.5E-86 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.0E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SUPERFAMILY SSF46955 404 475 1.56E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SMART SM00873 212 385 1.0E-99 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SUPERFAMILY SSF50249 36 195 4.65E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 SUPERFAMILY SSF54991 696 794 1.57E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Gene3D G3DSA:2.40.50.140 42 154 1.3E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Gene3D G3DSA:3.30.930.10 495 690 3.1E-68 T 22-04-2016 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 1.5E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Gene3D G3DSA:3.30.56.10 155 183 1.5E-27 T 22-04-2016 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 Gene3D G3DSA:3.30.56.10 1 38 1.5E-27 T 22-04-2016 YPTB_RS12730 6389d1590dcde357259a7d6c692018c9 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.1E-292 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPTB_RS12935 66ceecd20b3b8c89f75e10c2f338b8d8 237 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 237 31.002 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 YPTB_RS12935 66ceecd20b3b8c89f75e10c2f338b8d8 237 SUPERFAMILY SSF48657 5 119 1.96E-39 T 22-04-2016 IPR016103 ProQ/FinO domain YPTB_RS12935 66ceecd20b3b8c89f75e10c2f338b8d8 237 PANTHER PTHR38106 1 237 9.1E-96 T 22-04-2016 YPTB_RS12935 66ceecd20b3b8c89f75e10c2f338b8d8 237 SMART SM00945 5 119 5.0E-61 T 22-04-2016 IPR016103 ProQ/FinO domain YPTB_RS12935 66ceecd20b3b8c89f75e10c2f338b8d8 237 Pfam PF04352 ProQ/FINO family 8 115 1.2E-42 T 22-04-2016 IPR016103 ProQ/FinO domain YPTB_RS12935 66ceecd20b3b8c89f75e10c2f338b8d8 237 PANTHER PTHR38106:SF1 1 237 9.1E-96 T 22-04-2016 YPTB_RS12935 66ceecd20b3b8c89f75e10c2f338b8d8 237 Gene3D G3DSA:1.10.1710.10 4 118 5.5E-35 T 22-04-2016 IPR016103 ProQ/FinO domain YPTB_RS09265 0355490c9d0cedd310cb0a7eaa289712 333 Pfam PF04198 Putative sugar-binding domain 78 327 2.8E-67 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPTB_RS09265 0355490c9d0cedd310cb0a7eaa289712 333 SUPERFAMILY SSF100950 80 327 1.38E-65 T 22-04-2016 YPTB_RS09265 0355490c9d0cedd310cb0a7eaa289712 333 PANTHER PTHR34294 6 333 3.2E-228 T 22-04-2016 YPTB_RS09265 0355490c9d0cedd310cb0a7eaa289712 333 Gene3D G3DSA:3.40.50.1360 72 327 8.9E-74 T 22-04-2016 YPTB_RS09265 0355490c9d0cedd310cb0a7eaa289712 333 Gene3D G3DSA:1.10.10.10 37 71 5.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS09265 0355490c9d0cedd310cb0a7eaa289712 333 SUPERFAMILY SSF88659 32 63 1.57E-5 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS09265 0355490c9d0cedd310cb0a7eaa289712 333 PANTHER PTHR34294:SF4 6 333 3.2E-228 T 22-04-2016 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 Pfam PF13237 4Fe-4S dicluster domain 373 427 2.6E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 659 242.837 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 PANTHER PTHR11780:SF1 13 482 3.5E-259 T 22-04-2016 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 SUPERFAMILY SSF142019 94 303 1.96E-59 T 22-04-2016 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 Gene3D G3DSA:1.10.1060.10 367 445 1.2E-19 T 22-04-2016 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 1.4E-179 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 8.8E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 Pfam PF10531 SLBB domain 296 344 8.6E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 SUPERFAMILY SSF46548 336 444 9.42E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 PANTHER PTHR11780 13 482 3.5E-259 T 22-04-2016 YPTB_RS11825 5fe0a63a58e3c6c254003a1fce30d698 659 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.4E-28 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 Gene3D G3DSA:3.40.50.2300 1 118 6.2E-38 T 22-04-2016 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 PANTHER PTHR26402:SF575 1 224 1.5E-175 T 22-04-2016 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 Gene3D G3DSA:1.10.10.10 126 222 5.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 Pfam PF00072 Response regulator receiver domain 4 112 2.9E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 7.7E-90 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.7E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 SMART SM00448 1 111 2.3E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 SUPERFAMILY SSF46894 124 222 1.81E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 PANTHER PTHR26402 1 224 1.5E-175 T 22-04-2016 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 SMART SM00862 146 221 3.5E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS10925 860c5c203a9b525281aed030a5cf9bc8 230 SUPERFAMILY SSF52172 1 119 4.13E-37 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS20055 d6cc21370f7619b78754c5bf8975bc98 95 Gene3D G3DSA:3.40.1260.10 1 93 2.0E-33 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS20055 d6cc21370f7619b78754c5bf8975bc98 95 Pfam PF04077 DsrH like protein 7 92 2.1E-29 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YPTB_RS20055 d6cc21370f7619b78754c5bf8975bc98 95 PANTHER PTHR37526 1 95 1.8E-37 T 22-04-2016 YPTB_RS20055 d6cc21370f7619b78754c5bf8975bc98 95 SUPERFAMILY SSF75169 1 95 9.42E-31 T 22-04-2016 IPR027396 DsrEFH-like YPTB_RS20055 d6cc21370f7619b78754c5bf8975bc98 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 29.501 T 22-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 YPTB_RS20055 d6cc21370f7619b78754c5bf8975bc98 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 2.0E-31 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YPTB_RS08145 a97e8f8e3f6b71a7541cb864b6a3eea2 250 Gene3D G3DSA:3.90.226.10 4 227 1.6E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS08145 a97e8f8e3f6b71a7541cb864b6a3eea2 250 SUPERFAMILY SSF52096 7 240 4.1E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS08145 a97e8f8e3f6b71a7541cb864b6a3eea2 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 244 1.4E-47 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPTB_RS08145 a97e8f8e3f6b71a7541cb864b6a3eea2 250 PANTHER PTHR11941:SF67 1 248 3.6E-175 T 22-04-2016 YPTB_RS08145 a97e8f8e3f6b71a7541cb864b6a3eea2 250 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YPTB_RS08145 a97e8f8e3f6b71a7541cb864b6a3eea2 250 PANTHER PTHR11941 1 248 3.6E-175 T 22-04-2016 YPTB_RS19260 37a7c4ae82595842376d59ffc0d4ec24 489 Pfam PF00575 S1 RNA binding domain 38 109 3.1E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPTB_RS19260 37a7c4ae82595842376d59ffc0d4ec24 489 SUPERFAMILY SSF50249 39 128 6.0E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19260 37a7c4ae82595842376d59ffc0d4ec24 489 Pfam PF10150 Ribonuclease E/G family 124 393 4.1E-101 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YPTB_RS19260 37a7c4ae82595842376d59ffc0d4ec24 489 PANTHER PTHR30001 1 489 9.6E-229 T 22-04-2016 YPTB_RS19260 37a7c4ae82595842376d59ffc0d4ec24 489 Gene3D G3DSA:2.40.50.140 30 128 2.0E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19260 37a7c4ae82595842376d59ffc0d4ec24 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.9E-174 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YPTB_RS19260 37a7c4ae82595842376d59ffc0d4ec24 489 SMART SM00316 37 122 2.1E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 PANTHER PTHR21256 1 204 1.2E-121 T 22-04-2016 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 3.2E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 7.8E-16 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 SUPERFAMILY SSF141734 5 122 1.11E-46 T 22-04-2016 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.275 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 3.0E-26 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.667 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 SUPERFAMILY SSF101386 114 202 2.4E-23 T 22-04-2016 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 PANTHER PTHR21256:SF16 1 204 1.2E-121 T 22-04-2016 YPTB_RS08550 a1c88ee338198b93c5f31b8d874eba09 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 9.3E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YPTB_RS01470 5cc113f85fa092fb35fdaa5d2c0cefc3 286 PANTHER PTHR31126:SF21 134 286 9.4E-73 T 22-04-2016 YPTB_RS01470 5cc113f85fa092fb35fdaa5d2c0cefc3 286 PANTHER PTHR31126:SF21 12 91 9.4E-73 T 22-04-2016 YPTB_RS01470 5cc113f85fa092fb35fdaa5d2c0cefc3 286 Pfam PF13350 Tyrosine phosphatase family 12 286 6.0E-56 T 22-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YPTB_RS01470 5cc113f85fa092fb35fdaa5d2c0cefc3 286 SUPERFAMILY SSF52799 12 285 8.95E-50 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPTB_RS01470 5cc113f85fa092fb35fdaa5d2c0cefc3 286 PANTHER PTHR31126 134 286 9.4E-73 T 22-04-2016 YPTB_RS01470 5cc113f85fa092fb35fdaa5d2c0cefc3 286 PANTHER PTHR31126 12 91 9.4E-73 T 22-04-2016 YPTB_RS01470 5cc113f85fa092fb35fdaa5d2c0cefc3 286 Gene3D G3DSA:3.90.190.10 16 224 4.2E-14 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.616 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF00467 KOW motif 130 162 6.2E-8 T 22-04-2016 IPR005824 KOW YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00738 6 115 2.0E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:3.30.70.940 6 116 7.6E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF82679 6 116 3.4E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF50104 125 180 1.15E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:2.30.30.30 120 180 2.0E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00739 127 154 2.0E-6 T 22-04-2016 IPR005824 KOW YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PANTHER PTHR30265 3 180 9.4E-87 T 22-04-2016 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPTB_RS01655 3f0db8b79c3aa21e2123b26b5ffd87e7 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.1E-70 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:1.10.150.240 19 68 1.4E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:3.40.50.1000 90 185 7.1E-36 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:3.40.50.1000 5 18 7.1E-36 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 7.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PANTHER PTHR18901 1 186 1.2E-74 T 22-04-2016 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 5.8E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 9.3E-59 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PANTHER PTHR18901:SF29 1 186 1.2E-74 T 22-04-2016 YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 3.1E-30 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS04595 978a9f3cc4cc77d2966a9b87f37d3c0e 188 SUPERFAMILY SSF56784 5 185 3.2E-44 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 Gene3D G3DSA:3.40.50.1100 81 333 2.7E-79 T 22-04-2016 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 Gene3D G3DSA:3.40.1020.10 339 512 1.0E-56 T 22-04-2016 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 316 1.2E-75 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF53686 14 365 6.81E-101 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 PANTHER PTHR10314 15 368 1.7E-196 T 22-04-2016 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 6.1E-261 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF55021 336 423 9.16E-28 T 22-04-2016 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 PANTHER PTHR10314:SF30 15 368 1.7E-196 T 22-04-2016 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF55021 420 512 1.03E-25 T 22-04-2016 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 6.7E-26 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YPTB_RS00850 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.9E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YPTB_RS17405 6c588ecdc2338ed186a65c4975c94daf 232 PANTHER PTHR10146 1 232 8.7E-104 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPTB_RS17405 6c588ecdc2338ed186a65c4975c94daf 232 PIRSF PIRSF004848 1 232 9.2E-75 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPTB_RS17405 6c588ecdc2338ed186a65c4975c94daf 232 Gene3D G3DSA:3.20.20.10 1 230 1.1E-90 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS17405 6c588ecdc2338ed186a65c4975c94daf 232 SUPERFAMILY SSF51419 1 225 1.44E-80 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS17405 6c588ecdc2338ed186a65c4975c94daf 232 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPTB_RS17405 6c588ecdc2338ed186a65c4975c94daf 232 Pfam PF01168 Alanine racemase, N-terminal domain 7 227 1.9E-27 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPTB_RS17405 6c588ecdc2338ed186a65c4975c94daf 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 7.2E-93 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 3.9E-62 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 PIRSF PIRSF000535 2 311 2.5E-114 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 PANTHER PTHR10584:SF170 1 308 1.4E-126 T 22-04-2016 YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 SUPERFAMILY SSF53613 7 306 8.89E-66 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 PANTHER PTHR10584 1 308 1.4E-126 T 22-04-2016 YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 Gene3D G3DSA:3.40.1190.20 37 309 4.3E-83 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 9.3E-100 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPTB_RS07355 02c1d9f8b0894d3f1fe0f3d4a008d985 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.8E-98 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 Pfam PF13332 Haemagluttinin repeat 942 1097 4.5E-6 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 Pfam PF13332 Haemagluttinin repeat 1217 1387 1.8E-16 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 Pfam PF13332 Haemagluttinin repeat 1125 1201 0.0019 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 Pfam PF13332 Haemagluttinin repeat 635 773 8.7E-9 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 Pfam PF05860 haemagglutination activity domain 52 166 2.7E-20 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 SUPERFAMILY SSF51126 365 385 3.14E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 SUPERFAMILY SSF51126 45 311 3.14E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 72 155 7.3E-10 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 PANTHER PTHR32093 1 189 5.6E-59 T 22-04-2016 YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 SMART SM00912 54 174 1.0E-27 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS11125 67684d1953cb7489781b29cfa5ce9cf5 1631 Gene3D G3DSA:2.160.20.10 45 324 4.2E-56 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.47 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 PANTHER PTHR33603:SF1 1 155 1.4E-71 T 22-04-2016 YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 3.3E-82 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 SUPERFAMILY SSF75217 2 154 2.62E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 3.4E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 PIRSF PIRSF004505 1 155 4.6E-40 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 Gene3D G3DSA:3.40.1280.10 2 155 8.3E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB_RS06050 07406b49262ee00ba0b5bc71d1ac5ee7 156 PANTHER PTHR33603 1 155 1.4E-71 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 SUPERFAMILY SSF69279 6 192 5.95E-50 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 SUPERFAMILY SSF69349 449 656 1.1E-43 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 14 511 1.3E-118 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 PANTHER PTHR32305 1 665 0.0 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 SUPERFAMILY SSF69255 371 459 5.49E-32 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 528 4.3E-154 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 PANTHER PTHR32305:SF9 1 665 0.0 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 Gene3D G3DSA:3.55.50.10 106 197 4.4E-32 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 Pfam PF05954 Phage late control gene D protein (GPD) 18 335 3.6E-87 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 SUPERFAMILY SSF69279 200 371 2.21E-34 T 22-04-2016 YPTB_RS14410 067288fa973dc32440145e0df5491ca9 952 Gene3D G3DSA:2.40.50.230 377 459 1.5E-37 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS20295 f72bfbfe7df3eb6a87c3dc28e68ef5a1 201 Pfam PF05137 Fimbrial assembly protein (PilN) 101 171 1.3E-13 T 22-04-2016 IPR007813 Fimbrial assembly PilN YPTB_RS20295 f72bfbfe7df3eb6a87c3dc28e68ef5a1 201 Gene3D G3DSA:3.20.20.140 13 98 8.2E-4 T 22-04-2016 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 2.6E-150 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 SUPERFAMILY SSF51556 6 347 1.54E-145 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 Gene3D G3DSA:3.20.20.140 6 347 9.3E-132 T 22-04-2016 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 PIRSF PIRSF001237 4 348 7.1E-141 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 Pfam PF01979 Amidohydrolase family 15 307 2.3E-19 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 54.344 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 PANTHER PTHR11647:SF59 1 320 1.1E-154 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPTB_RS13480 40dd3f102705cfbd0f196fd8e4a4b883 348 PANTHER PTHR11647 1 320 1.1E-154 T 22-04-2016 YPTB_RS06285 cc8db460c4cba1a9b36e583f4239b49a 144 PANTHER PTHR12901:SF7 1 142 3.5E-67 T 22-04-2016 YPTB_RS06285 cc8db460c4cba1a9b36e583f4239b49a 144 PANTHER PTHR12901 1 142 3.5E-67 T 22-04-2016 YPTB_RS06285 cc8db460c4cba1a9b36e583f4239b49a 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 2.2E-33 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain YPTB_RS06285 cc8db460c4cba1a9b36e583f4239b49a 144 Gene3D G3DSA:3.30.530.20 1 142 3.1E-49 T 22-04-2016 IPR023393 START-like domain YPTB_RS06285 cc8db460c4cba1a9b36e583f4239b49a 144 SUPERFAMILY SSF55961 1 143 3.17E-35 T 22-04-2016 YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 PANTHER PTHR32305 3 556 9.1E-164 T 22-04-2016 YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 PANTHER PTHR32305:SF6 3 556 9.1E-164 T 22-04-2016 YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 470 506 9.6E-8 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 386 426 6.8E-10 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 302 342 4.6E-11 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 348 384 4.7E-4 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 260 301 5.8E-11 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 428 468 1.5E-10 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 108 148 1.7E-8 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 218 259 3.7E-11 T 22-04-2016 IPR006530 YD repeat YPTB_RS17740 d42e634f30a2f219f8c2146d81b0f756 566 Pfam PF05593 RHS Repeat 302 338 4.2E-7 T 22-04-2016 IPR031325 RHS repeat YPTB_RS20485 2591140879f43e302f6274a3a75e0fd4 565 Pfam PF07694 5TMR of 5TMR-LYT 30 198 1.4E-58 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 YPTB_RS20485 2591140879f43e302f6274a3a75e0fd4 565 Gene3D G3DSA:3.30.565.10 422 559 5.2E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20485 2591140879f43e302f6274a3a75e0fd4 565 SUPERFAMILY SSF55781 236 357 4.41E-5 T 22-04-2016 IPR029016 GAF domain-like YPTB_RS20485 2591140879f43e302f6274a3a75e0fd4 565 SUPERFAMILY SSF55874 426 558 4.11E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20485 2591140879f43e302f6274a3a75e0fd4 565 Pfam PF06580 Histidine kinase 373 450 2.9E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 YPTB_RS20485 2591140879f43e302f6274a3a75e0fd4 565 PANTHER PTHR34220:SF3 3 565 0.0 T 22-04-2016 YPTB_RS20485 2591140879f43e302f6274a3a75e0fd4 565 PANTHER PTHR34220 3 565 0.0 T 22-04-2016 YPTB_RS15525 68969616c361f8f80fb105ae7d9508eb 299 SUPERFAMILY SSF46785 25 82 1.18E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15525 68969616c361f8f80fb105ae7d9508eb 299 Gene3D G3DSA:3.40.190.10 75 208 1.0E-60 T 22-04-2016 YPTB_RS15525 68969616c361f8f80fb105ae7d9508eb 299 Gene3D G3DSA:1.10.10.10 25 74 5.1E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15525 68969616c361f8f80fb105ae7d9508eb 299 SUPERFAMILY SSF53850 74 299 2.05E-82 T 22-04-2016 YPTB_RS15525 68969616c361f8f80fb105ae7d9508eb 299 Pfam PF14503 YhfZ C-terminal domain 76 299 5.0E-80 T 22-04-2016 IPR032791 Uncharacterised protein YhfZ, C-terminal domain YPTB_RS15525 68969616c361f8f80fb105ae7d9508eb 299 Pfam PF14502 Helix-turn-helix domain 25 70 2.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10660 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489 278 430 2.1E-137 T 22-04-2016 YPTB_RS10660 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489 1 259 2.1E-137 T 22-04-2016 YPTB_RS10660 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489:SF16 278 430 2.1E-137 T 22-04-2016 YPTB_RS10660 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489:SF16 1 259 2.1E-137 T 22-04-2016 YPTB_RS10660 bd56aee6fb75eaeee8c5b33f3850279a 430 Pfam PF02687 FtsX-like permease family 310 422 1.4E-22 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS10705 32cccfc13fdee411e793e3c0a1b8b352 444 Pfam PF00535 Glycosyl transferase family 2 78 245 3.3E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPTB_RS10705 32cccfc13fdee411e793e3c0a1b8b352 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 1.8E-193 T 22-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- YPTB_RS10705 32cccfc13fdee411e793e3c0a1b8b352 444 Gene3D G3DSA:3.90.550.10 75 321 3.0E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS10705 32cccfc13fdee411e793e3c0a1b8b352 444 SUPERFAMILY SSF53448 68 344 6.25E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS10705 32cccfc13fdee411e793e3c0a1b8b352 444 PANTHER PTHR10859 60 425 5.5E-179 T 22-04-2016 YPTB_RS10705 32cccfc13fdee411e793e3c0a1b8b352 444 PANTHER PTHR10859:SF92 60 425 5.5E-179 T 22-04-2016 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 Gene3D G3DSA:3.90.1150.10 357 469 1.2E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 29 46 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 94 112 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 73 92 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 113 132 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 47 66 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 6 25 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 342 357 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 385 404 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 35 402 1.5E-95 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PANTHER PTHR11999:SF70 1 470 1.0E-179 T 22-04-2016 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 SUPERFAMILY SSF53383 1 470 5.16E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 Gene3D G3DSA:3.40.640.10 84 356 1.3E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 PANTHER PTHR11999 1 470 1.0E-179 T 22-04-2016 YPTB_RS06830 cc1ff295e78872338f685b778632330e 471 Gene3D G3DSA:1.20.1340.10 1 81 1.1E-30 T 22-04-2016 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 SUPERFAMILY SSF54631 193 330 1.01E-22 T 22-04-2016 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 PANTHER PTHR22777 1 423 1.7E-159 T 22-04-2016 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 Gene3D G3DSA:3.10.580.10 192 319 3.0E-11 T 22-04-2016 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 Pfam PF01595 Domain of unknown function DUF21 12 185 3.1E-51 T 22-04-2016 IPR002550 Domain of unknown function DUF21 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 PANTHER PTHR22777:SF3 1 423 1.7E-159 T 22-04-2016 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 SMART SM01091 343 420 3.4E-23 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 Gene3D G3DSA:3.30.465.10 320 419 1.3E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 Pfam PF00571 CBS domain 279 327 0.0023 T 22-04-2016 IPR000644 CBS domain YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 SUPERFAMILY SSF56176 341 424 8.45E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS04615 2698e97bde7d7713e404973fbc650ba7 427 Pfam PF03471 Transporter associated domain 345 418 2.9E-17 T 22-04-2016 IPR005170 Transporter-associated domain YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 Gene3D G3DSA:2.40.50.100 119 183 3.0E-32 T 22-04-2016 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 6.8E-38 T 22-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 3.1E-26 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 SUPERFAMILY SSF50331 122 191 4.37E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 Pfam PF03459 TOBE domain 198 258 5.9E-12 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 Pfam PF03459 TOBE domain 124 188 2.6E-15 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 PANTHER PTHR30432 1 263 1.4E-78 T 22-04-2016 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 PIRSF PIRSF005763 1 263 9.1E-95 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 2.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 SUPERFAMILY SSF50331 171 259 5.48E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 Gene3D G3DSA:2.40.50.100 184 253 4.2E-20 T 22-04-2016 YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 SUPERFAMILY SSF46785 2 103 7.62E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06515 e9c8da64f33813583679035a3e8b0653 263 Gene3D G3DSA:1.10.10.10 1 118 8.8E-45 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 PIRSF PIRSF039085 1 242 2.0E-83 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 Pfam PF00005 ABC transporter 20 170 5.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 SUPERFAMILY SSF52540 3 234 1.82E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 PANTHER PTHR24220 4 241 2.0E-174 T 22-04-2016 YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 PANTHER PTHR24220:SF495 4 241 2.0E-174 T 22-04-2016 YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 SMART SM00382 27 218 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 Gene3D G3DSA:3.40.50.300 3 234 1.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07620 0ec7a3e3d52e5c09ea4bbe5bb6b4f614 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS09675 99e3edfa5b3b22168605fbfb143b9eea 219 Pfam PF05944 Phage small terminase subunit 35 164 1.2E-45 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PIRSF PIRSF019404 1 147 1.3E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 Pfam PF02050 Flagellar FliJ protein 19 141 2.1E-36 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 3.7E-34 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPTB_RS09345 a91bb39deef83981ee7d2c5501a8bf9c 148 PANTHER PTHR38786 1 147 1.7E-55 T 22-04-2016 YPTB_RS02900 edbfae171ce78f907c9f102186fc3f22 250 SMART SM00849 37 223 9.4E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS02900 edbfae171ce78f907c9f102186fc3f22 250 Gene3D G3DSA:3.60.15.10 1 249 2.8E-53 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS02900 edbfae171ce78f907c9f102186fc3f22 250 Pfam PF12706 Beta-lactamase superfamily domain 50 220 6.0E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS02900 edbfae171ce78f907c9f102186fc3f22 250 SUPERFAMILY SSF56281 1 249 3.66E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS02900 edbfae171ce78f907c9f102186fc3f22 250 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 247 2.7E-130 T 22-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 YPTB_RS02900 edbfae171ce78f907c9f102186fc3f22 250 PANTHER PTHR12553 1 249 1.9E-54 T 22-04-2016 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 Gene3D G3DSA:3.30.160.160 56 101 9.1E-19 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 Gene3D G3DSA:3.30.160.160 5 50 1.0E-24 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 SUPERFAMILY SSF160113 56 109 4.97E-15 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 SUPERFAMILY SSF160113 4 60 2.88E-19 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 PANTHER PTHR40606:SF1 3 111 4.1E-73 T 22-04-2016 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 PANTHER PTHR40606 3 111 4.1E-73 T 22-04-2016 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 3.3E-18 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPTB_RS15255 8ef116863a6e7af25c31d83e8d73f86a 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 1.8E-23 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 Pfam PF00303 Thymidylate synthase 2 264 4.7E-124 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 PANTHER PTHR11548 1 264 4.8E-199 T 22-04-2016 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.903 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 2.9E-92 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 5.1E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 Gene3D G3DSA:3.30.572.10 1 264 5.0E-134 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS16425 b15a4ac589d76bf4f503db2a564bc391 264 SUPERFAMILY SSF55831 1 264 6.67E-130 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPTB_RS19600 5ee9e6f36ad899e09767ad10180931e8 437 PANTHER PTHR37024 1 437 3.9E-121 T 22-04-2016 YPTB_RS19600 5ee9e6f36ad899e09767ad10180931e8 437 Pfam PF12486 Type VI secretion system, EvfB, or VasL 284 430 7.7E-55 T 22-04-2016 IPR021069 ImpA, C-terminal YPTB_RS19600 5ee9e6f36ad899e09767ad10180931e8 437 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 113 1.3E-22 T 22-04-2016 IPR010657 ImpA, N-terminal YPTB_RS14390 fa4cdcfdc6103e9725aef29d85f256b0 159 PANTHER PTHR38595:SF1 1 159 7.2E-96 T 22-04-2016 YPTB_RS14390 fa4cdcfdc6103e9725aef29d85f256b0 159 Gene3D G3DSA:3.10.450.40 86 141 4.1E-4 T 22-04-2016 YPTB_RS14390 fa4cdcfdc6103e9725aef29d85f256b0 159 PANTHER PTHR38595 1 159 7.2E-96 T 22-04-2016 YPTB_RS14390 fa4cdcfdc6103e9725aef29d85f256b0 159 Pfam PF04965 Gene 25-like lysozyme 36 136 1.1E-16 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPTB_RS14390 fa4cdcfdc6103e9725aef29d85f256b0 159 SUPERFAMILY SSF160719 72 144 1.18E-10 T 22-04-2016 YPTB_RS06360 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365 1 310 3.9E-273 T 22-04-2016 YPTB_RS06360 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365 376 520 3.9E-273 T 22-04-2016 YPTB_RS06360 082cb72adc2e2ac294aac9c2a69a8cd7 522 PIRSF PIRSF006446 1 521 9.5E-141 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YPTB_RS06360 082cb72adc2e2ac294aac9c2a69a8cd7 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 4.1E-173 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YPTB_RS06360 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365:SF0 1 310 3.9E-273 T 22-04-2016 YPTB_RS06360 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365:SF0 376 520 3.9E-273 T 22-04-2016 YPTB_RS17985 8d1f39fd4c90843092d77bbb407b9b15 428 PANTHER PTHR30288:SF0 1 423 4.6E-79 T 22-04-2016 YPTB_RS17985 8d1f39fd4c90843092d77bbb407b9b15 428 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 6 103 2.6E-13 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 YPTB_RS17985 8d1f39fd4c90843092d77bbb407b9b15 428 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 209 415 4.5E-23 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 YPTB_RS17985 8d1f39fd4c90843092d77bbb407b9b15 428 PANTHER PTHR30288 1 423 4.6E-79 T 22-04-2016 YPTB_RS17985 8d1f39fd4c90843092d77bbb407b9b15 428 Pfam PF07196 Flagellin hook IN motif 128 178 2.2E-5 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 YPTB_RS03150 eaa5295662d338397d5e003035ec1e54 408 PANTHER PTHR37422:SF1 4 405 1.8E-175 T 22-04-2016 YPTB_RS03150 eaa5295662d338397d5e003035ec1e54 408 Pfam PF04932 O-Antigen ligase 194 338 2.6E-16 T 22-04-2016 IPR007016 O-antigen ligase-related YPTB_RS03150 eaa5295662d338397d5e003035ec1e54 408 PANTHER PTHR37422 4 405 1.8E-175 T 22-04-2016 YPTB_RS03735 354d329585dcc7c6d70d95fd2b98f69e 393 Pfam PF07690 Major Facilitator Superfamily 19 346 8.6E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS03735 354d329585dcc7c6d70d95fd2b98f69e 393 PANTHER PTHR23535:SF2 2 392 6.0E-176 T 22-04-2016 YPTB_RS03735 354d329585dcc7c6d70d95fd2b98f69e 393 PANTHER PTHR23535 2 392 6.0E-176 T 22-04-2016 YPTB_RS03735 354d329585dcc7c6d70d95fd2b98f69e 393 SUPERFAMILY SSF103473 10 390 3.4E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS03735 354d329585dcc7c6d70d95fd2b98f69e 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 391 4.0E-159 T 22-04-2016 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 YPTB_RS03735 354d329585dcc7c6d70d95fd2b98f69e 393 Gene3D G3DSA:1.20.1250.20 12 198 4.5E-22 T 22-04-2016 YPTB_RS03735 354d329585dcc7c6d70d95fd2b98f69e 393 Gene3D G3DSA:1.20.1250.20 215 391 1.4E-20 T 22-04-2016 YPTB_RS16010 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 SUPERFAMILY SSF53850 24 324 4.61E-94 T 22-04-2016 YPTB_RS16010 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 Gene3D G3DSA:3.40.190.10 23 112 1.2E-55 T 22-04-2016 YPTB_RS16010 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 Gene3D G3DSA:3.40.190.10 262 328 1.2E-55 T 22-04-2016 YPTB_RS16010 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 311 4.6E-53 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YPTB_RS16010 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 Gene3D G3DSA:3.40.190.100 114 261 1.6E-56 T 22-04-2016 YPTB_RS09180 9459429422285cda8e1bf1fe0984a8c1 140 Pfam PF06366 Flagellar protein FlhE 35 140 1.7E-36 T 22-04-2016 IPR009420 Flagellar protein FlhE YPTB_RS08885 46182cffe27e49c4c56efb16947f2e5d 94 SUPERFAMILY SSF54909 1 81 1.64E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS08885 46182cffe27e49c4c56efb16947f2e5d 94 PANTHER PTHR37828 1 94 1.8E-29 T 22-04-2016 YPTB_RS08885 46182cffe27e49c4c56efb16947f2e5d 94 Pfam PF03795 YCII-related domain 1 79 3.1E-10 T 22-04-2016 IPR005545 YCII-related YPTB_RS08885 46182cffe27e49c4c56efb16947f2e5d 94 PANTHER PTHR37828:SF1 1 94 1.8E-29 T 22-04-2016 YPTB_RS15830 4aac94c35a23ce4b9571e4cd6fa08497 253 Gene3D G3DSA:3.20.20.370 1 252 5.1E-80 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS15830 4aac94c35a23ce4b9571e4cd6fa08497 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 41.618 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 YPTB_RS15830 4aac94c35a23ce4b9571e4cd6fa08497 253 SUPERFAMILY SSF88713 1 252 2.89E-77 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS15830 4aac94c35a23ce4b9571e4cd6fa08497 253 PANTHER PTHR31609 1 253 6.7E-106 T 22-04-2016 YPTB_RS15830 4aac94c35a23ce4b9571e4cd6fa08497 253 Pfam PF04794 YdjC-like protein 5 241 1.6E-62 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 4.7E-100 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 Gene3D G3DSA:3.40.50.720 1 243 1.1E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322:SF635 151 183 3.1E-77 T 22-04-2016 YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322:SF635 10 135 3.1E-77 T 22-04-2016 YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 2.3E-5 T 22-04-2016 YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 9.2E-66 T 22-04-2016 YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322 151 183 3.1E-77 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322 10 135 3.1E-77 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13430 1a3343fac073c996d9e0647deeb84e31 244 SUPERFAMILY SSF51735 4 243 2.04E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS16690 416246d98281be2c7ca2092d6cf2cdaa 352 PANTHER PTHR33886:SF2 1 352 1.2E-132 T 22-04-2016 YPTB_RS16690 416246d98281be2c7ca2092d6cf2cdaa 352 Gene3D G3DSA:1.50.10.10 4 351 1.2E-83 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 YPTB_RS16690 416246d98281be2c7ca2092d6cf2cdaa 352 Pfam PF07470 Glycosyl Hydrolase Family 88 41 351 6.3E-72 T 22-04-2016 IPR010905 Glycosyl hydrolase, family 88 YPTB_RS16690 416246d98281be2c7ca2092d6cf2cdaa 352 SUPERFAMILY SSF48208 36 351 2.04E-52 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YPTB_RS16690 416246d98281be2c7ca2092d6cf2cdaa 352 PANTHER PTHR33886 1 352 1.2E-132 T 22-04-2016 YPTB_RS09590 e2d5543c3a7940c8647a7824027362d8 40 Pfam PF06528 Phage P2 GpE 1 36 3.2E-20 T 22-04-2016 IPR009493 Burkholderia phage phiE202, Gp27 YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 SUPERFAMILY SSF109755 13 230 1.78E-70 T 22-04-2016 YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 Pfam PF01895 PhoU domain 128 212 8.2E-17 T 22-04-2016 IPR026022 PhoU domain YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 Pfam PF01895 PhoU domain 26 111 2.3E-22 T 22-04-2016 IPR026022 PhoU domain YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 Gene3D G3DSA:1.20.58.220 9 114 1.7E-37 T 22-04-2016 YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 PANTHER PTHR10010:SF14 1 224 6.6E-96 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 PIRSF PIRSF003107 7 226 8.2E-68 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 Gene3D G3DSA:1.20.58.220 127 232 7.3E-31 T 22-04-2016 YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 PANTHER PTHR10010 1 224 6.6E-96 T 22-04-2016 YPTB_RS21370 ed45196deeb4cbd477033b2625599b29 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.7E-74 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 Pfam PF01464 Transglycosylase SLT domain 480 590 1.1E-33 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 1.2E-25 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 SUPERFAMILY SSF48435 23 471 1.31E-139 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 Gene3D G3DSA:1.10.1240.20 399 466 2.6E-29 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 PANTHER PTHR21666:SF184 457 639 5.5E-101 T 22-04-2016 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 SUPERFAMILY SSF53955 473 635 1.97E-50 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 Gene3D G3DSA:1.25.20.10 24 384 1.8E-119 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 Gene3D G3DSA:1.10.530.10 469 634 3.6E-51 T 22-04-2016 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 PANTHER PTHR21666 457 639 5.5E-101 T 22-04-2016 YPTB_RS03360 a43eb4e740867e1fc00c58e0a73dbcc0 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPTB_RS11285 b57e73dea97e6a7c2f3b8b21224ce6df 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 3.0E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPTB_RS11285 b57e73dea97e6a7c2f3b8b21224ce6df 89 SUPERFAMILY SSF55229 32 85 1.44E-17 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPTB_RS11285 b57e73dea97e6a7c2f3b8b21224ce6df 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.0E-33 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPTB_RS11285 b57e73dea97e6a7c2f3b8b21224ce6df 89 PANTHER PTHR33404 1 89 1.0E-37 T 22-04-2016 YPTB_RS11285 b57e73dea97e6a7c2f3b8b21224ce6df 89 Gene3D G3DSA:3.30.1070.10 31 86 2.1E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPTB_RS11285 b57e73dea97e6a7c2f3b8b21224ce6df 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.604 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 628 757 9.0E-43 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 394 408 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 SUPERFAMILY SSF53383 150 620 1.45E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 Gene3D G3DSA:3.40.640.10 150 455 9.7E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 PIRSF PIRSF009393 6 768 1.6E-278 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 PANTHER PTHR11751:SF353 651 659 2.6E-145 T 22-04-2016 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 PANTHER PTHR11751:SF353 691 766 2.6E-145 T 22-04-2016 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 PANTHER PTHR11751:SF353 151 498 2.6E-145 T 22-04-2016 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 Gene3D G3DSA:3.90.1150.10 460 645 5.9E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 PANTHER PTHR11751 651 659 2.6E-145 T 22-04-2016 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 PANTHER PTHR11751 691 766 2.6E-145 T 22-04-2016 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 PANTHER PTHR11751 151 498 2.6E-145 T 22-04-2016 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 SUPERFAMILY SSF55904 623 763 2.35E-35 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 26 144 1.4E-20 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 150 603 9.1E-159 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPTB_RS06865 3818b8febb79c94eafeb119a393eee92 768 Gene3D G3DSA:3.90.100.10 646 759 2.5E-28 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPTB_RS05295 8b346dbcbdbf3ea28143d930a6911c6a 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 2.1E-54 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG YPTB_RS05295 8b346dbcbdbf3ea28143d930a6911c6a 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 3.6E-5 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 SUPERFAMILY SSF55811 4 139 3.79E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 Gene3D G3DSA:3.90.79.10 3 132 5.7E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 Pfam PF00293 NUDIX domain 5 126 3.2E-28 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 PANTHER PTHR22769 1 150 3.0E-31 T 22-04-2016 YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 PRINTS PR00502 NUDIX hydrolase family signature 31 45 4.6E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 PRINTS PR00502 NUDIX hydrolase family signature 45 60 4.6E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS07345 ec26f93d2a79ac18b4b2a7ecae72f1f1 151 PANTHER PTHR22769:SF33 1 150 3.0E-31 T 22-04-2016 YPTB_RS01340 aaff589c244b2a12c4a63fb6a5a9d0f8 130 Gene3D G3DSA:3.40.630.30 20 125 1.0E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS01340 aaff589c244b2a12c4a63fb6a5a9d0f8 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 1.6E-54 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS01340 aaff589c244b2a12c4a63fb6a5a9d0f8 130 Hamap MF_02018 PanD maturation factor [panM]. 1 130 34.456 T 22-04-2016 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 YPTB_RS01340 aaff589c244b2a12c4a63fb6a5a9d0f8 130 SUPERFAMILY SSF55729 11 123 3.21E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS13115 8fe972eaa7f2ab63e399913e588b9878 232 Pfam PF02308 MgtC family 10 129 1.3E-38 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS13115 8fe972eaa7f2ab63e399913e588b9878 232 PANTHER PTHR33778:SF3 1 232 1.4E-123 T 22-04-2016 YPTB_RS13115 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 4.8E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS13115 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 4.8E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS13115 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 4.8E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS13115 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 4.8E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPTB_RS13115 8fe972eaa7f2ab63e399913e588b9878 232 PANTHER PTHR33778 1 232 1.4E-123 T 22-04-2016 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 SUPERFAMILY SSF53850 90 283 4.34E-24 T 22-04-2016 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 Gene3D G3DSA:3.40.190.10 85 174 1.2E-9 T 22-04-2016 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 PANTHER PTHR30579:SF0 1 280 3.1E-114 T 22-04-2016 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 Gene3D G3DSA:1.10.10.10 2 82 9.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 Pfam PF03466 LysR substrate binding domain 88 280 1.0E-22 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 SUPERFAMILY SSF46785 2 81 6.93E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 287 61.156 T 22-04-2016 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 YPTB_RS00815 83f29f6548ec01705871670b25a500e7 293 PANTHER PTHR30579 1 280 3.1E-114 T 22-04-2016 YPTB_RS20755 d1d999c08d6135b2936d866075a4f8a0 300 Gene3D G3DSA:1.10.3720.10 88 296 1.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20755 d1d999c08d6135b2936d866075a4f8a0 300 PANTHER PTHR30465:SF10 10 300 7.1E-144 T 22-04-2016 YPTB_RS20755 d1d999c08d6135b2936d866075a4f8a0 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 6.6E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20755 d1d999c08d6135b2936d866075a4f8a0 300 PANTHER PTHR30465 10 300 7.1E-144 T 22-04-2016 YPTB_RS20755 d1d999c08d6135b2936d866075a4f8a0 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 6.8E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB_RS20755 d1d999c08d6135b2936d866075a4f8a0 300 SUPERFAMILY SSF161098 93 280 1.57E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02700 524f9a37afb9fd3e90e1f58a348a1b3b 97 Gene3D G3DSA:3.30.110.60 1 94 1.8E-33 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPTB_RS02700 524f9a37afb9fd3e90e1f58a348a1b3b 97 SMART SM01103 3 86 7.0E-41 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPTB_RS02700 524f9a37afb9fd3e90e1f58a348a1b3b 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPTB_RS02700 524f9a37afb9fd3e90e1f58a348a1b3b 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 5.6E-38 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 YPTB_RS02700 524f9a37afb9fd3e90e1f58a348a1b3b 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.2E-22 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPTB_RS02700 524f9a37afb9fd3e90e1f58a348a1b3b 97 SUPERFAMILY SSF75471 1 96 7.19E-31 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPTB_RS02700 524f9a37afb9fd3e90e1f58a348a1b3b 97 PANTHER PTHR31846 1 97 2.0E-44 T 22-04-2016 YPTB_RS00320 5c6a5ed872253485327ff3e0c5c0de1f 152 Pfam PF00692 dUTPase 17 150 2.4E-43 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 YPTB_RS00320 5c6a5ed872253485327ff3e0c5c0de1f 152 Gene3D G3DSA:2.70.40.10 5 151 1.4E-54 T 22-04-2016 IPR029054 dUTPase-like YPTB_RS00320 5c6a5ed872253485327ff3e0c5c0de1f 152 PANTHER PTHR11241 1 151 2.2E-57 T 22-04-2016 YPTB_RS00320 5c6a5ed872253485327ff3e0c5c0de1f 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.47 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 YPTB_RS00320 5c6a5ed872253485327ff3e0c5c0de1f 152 SUPERFAMILY SSF51283 1 151 1.3E-56 T 22-04-2016 IPR029054 dUTPase-like YPTB_RS00320 5c6a5ed872253485327ff3e0c5c0de1f 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 1.1E-49 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 455 7.1E-161 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50156 382 456 3.55E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.40.10.10 158 270 3.5E-43 T 22-04-2016 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PANTHER PTHR22939 1 457 4.3E-207 T 22-04-2016 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50156 227 352 8.54E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.30.42.10 271 366 3.3E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF13365 Trypsin-like peptidase domain 94 230 1.7E-33 T 22-04-2016 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.30.42.10 389 454 5.4E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF13180 PDZ domain 280 360 9.7E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 PANTHER PTHR22939:SF101 1 457 4.3E-207 T 22-04-2016 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 375 445 1.4E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 SMART SM00228 269 351 1.3E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 SMART SM00228 352 449 5.1E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.40.10.10 39 157 1.3E-35 T 22-04-2016 YPTB_RS19010 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50494 39 261 1.6E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 Pfam PF00106 short chain dehydrogenase 3 191 2.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0064 T 22-04-2016 YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322 146 178 3.3E-112 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322 7 130 3.3E-112 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 Gene3D G3DSA:3.40.50.720 2 237 2.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322:SF463 146 178 3.3E-112 T 22-04-2016 YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322:SF463 7 130 3.3E-112 T 22-04-2016 YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 SUPERFAMILY SSF51735 3 254 1.58E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05665 4f97295b59848490394b745bd61fa45d 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938 1 114 1.0E-78 T 22-04-2016 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938 131 156 1.0E-78 T 22-04-2016 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Pfam PF13187 4Fe-4S dicluster domain 88 155 5.1E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938:SF111 1 114 1.0E-78 T 22-04-2016 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938:SF111 131 156 1.0E-78 T 22-04-2016 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Gene3D G3DSA:3.30.70.20 4 65 2.1E-18 T 22-04-2016 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Pfam PF12800 4Fe-4S binding domain 12 22 0.14 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Gene3D G3DSA:3.30.70.20 97 170 1.4E-15 T 22-04-2016 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 SUPERFAMILY SSF54862 1 162 1.26E-39 T 22-04-2016 YPTB_RS02290 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Gene3D G3DSA:3.30.70.20 66 96 3.2E-15 T 22-04-2016 YPTB_RS17635 299fa75be9dcaa0bc702874c11944895 216 PANTHER PTHR10794 11 206 1.2E-29 T 22-04-2016 YPTB_RS17635 299fa75be9dcaa0bc702874c11944895 216 Pfam PF02517 CAAX protease self-immunity 114 206 4.9E-19 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 YPTB_RS11200 5d1c5c01491b135aed83b00d375ad973 252 SUPERFAMILY SSF52540 3 218 1.05E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11200 5d1c5c01491b135aed83b00d375ad973 252 SMART SM00382 29 199 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11200 5d1c5c01491b135aed83b00d375ad973 252 PANTHER PTHR24220:SF466 6 245 2.2E-156 T 22-04-2016 YPTB_RS11200 5d1c5c01491b135aed83b00d375ad973 252 PANTHER PTHR24220 6 245 2.2E-156 T 22-04-2016 YPTB_RS11200 5d1c5c01491b135aed83b00d375ad973 252 Gene3D G3DSA:3.40.50.300 3 216 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11200 5d1c5c01491b135aed83b00d375ad973 252 Pfam PF00005 ABC transporter 20 149 5.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 PANTHER PTHR30620:SF18 18 716 0.0 T 22-04-2016 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 SUPERFAMILY SSF52279 361 595 7.59E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 SUPERFAMILY SSF51445 19 360 1.16E-88 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 Gene3D G3DSA:3.20.20.300 19 337 2.5E-97 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 PANTHER PTHR30620 18 716 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 249 267 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 102 121 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 179 195 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 70 86 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 164 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 249 266 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 70 328 9.6E-52 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 Gene3D G3DSA:3.40.50.1700 348 595 3.0E-60 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 361 593 1.1E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 Pfam PF14310 Fibronectin type III-like domain 632 702 9.1E-27 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPTB_RS05820 4fcc9ca21c091218ceb99869d4438c3a 793 SMART SM01217 632 702 5.1E-34 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPTB_RS17025 cc2fb807ee00d4eb0bf32283f128fe72 234 Pfam PF05944 Phage small terminase subunit 37 166 7.6E-41 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 YPTB_RS13315 c292fc5565102353a3f711a2b5d257cd 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 8 288 5.1E-94 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS13315 c292fc5565102353a3f711a2b5d257cd 339 PANTHER PTHR30480 1 318 1.7E-142 T 22-04-2016 YPTB_RS13315 c292fc5565102353a3f711a2b5d257cd 339 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 328 47.195 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 YPTB_RS13315 c292fc5565102353a3f711a2b5d257cd 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 230 247 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YPTB_RS13315 c292fc5565102353a3f711a2b5d257cd 339 PANTHER PTHR30480:SF7 1 318 1.7E-142 T 22-04-2016 YPTB_RS13315 c292fc5565102353a3f711a2b5d257cd 339 SUPERFAMILY SSF51445 1 313 2.74E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS13315 c292fc5565102353a3f711a2b5d257cd 339 Gene3D G3DSA:3.20.20.300 1 315 2.0E-95 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPTB_RS12230 53a5da3e930347aa81dd6d80e69d9368 201 PANTHER PTHR10204 1 201 1.1E-117 T 22-04-2016 YPTB_RS12230 53a5da3e930347aa81dd6d80e69d9368 201 SUPERFAMILY SSF52218 1 199 1.36E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS12230 53a5da3e930347aa81dd6d80e69d9368 201 Gene3D G3DSA:3.40.50.360 1 199 4.1E-68 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS12230 53a5da3e930347aa81dd6d80e69d9368 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 33.026 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 YPTB_RS12230 53a5da3e930347aa81dd6d80e69d9368 201 PANTHER PTHR10204:SF16 1 201 1.1E-117 T 22-04-2016 YPTB_RS12230 53a5da3e930347aa81dd6d80e69d9368 201 Pfam PF02525 Flavodoxin-like fold 3 195 2.5E-47 T 22-04-2016 IPR003680 Flavodoxin-like fold YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 ProSitePatterns PS01068 OmpA-like domain. 264 308 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 Pfam PF01389 OmpA-like transmembrane domain 23 200 5.9E-68 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PANTHER PTHR30128:SF16 1 353 8.8E-141 T 22-04-2016 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01021 OMPA domain signature 230 252 1.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01021 OMPA domain signature 262 277 1.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01021 OMPA domain signature 277 293 1.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 SUPERFAMILY SSF103088 217 341 1.96E-32 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 Gene3D G3DSA:2.40.160.20 11 218 7.8E-74 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 Pfam PF00691 OmpA family 229 322 6.0E-19 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 SUPERFAMILY SSF56925 22 200 1.33E-40 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 Gene3D G3DSA:3.30.1330.60 219 341 2.7E-36 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 171 185 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 320 333 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 247 266 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 218 233 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 185 199 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 286 305 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 108 124 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPTB_RS08015 c820262d696b6c623331f6cf718b97ef 353 PANTHER PTHR30128 1 353 8.8E-141 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 7.1E-52 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF00679 Elongation factor G C-terminus 399 482 5.9E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.0E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:2.40.30.10 193 289 3.3E-24 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF54980 292 370 3.02E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.30.70.870 291 369 9.9E-26 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.40.50.300 2 192 4.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 6.8E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.814 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115:SF175 397 595 4.5E-279 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115:SF175 2 373 4.5E-279 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115 397 595 4.5E-279 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115 2 373 4.5E-279 T 22-04-2016 YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF52540 2 234 1.32E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.5E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF54980 399 493 2.11E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.30.70.240 401 489 1.5E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS15630 d033e8c484aea615f05c8b2f91635f80 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.1E-300 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 YPTB_RS01990 25f4ba0a53ee44e24cfeb5440b2ecccd 279 PANTHER PTHR30535 26 275 2.0E-103 T 22-04-2016 YPTB_RS01990 25f4ba0a53ee44e24cfeb5440b2ecccd 279 PANTHER PTHR30535:SF4 26 275 2.0E-103 T 22-04-2016 YPTB_RS01990 25f4ba0a53ee44e24cfeb5440b2ecccd 279 Pfam PF01497 Periplasmic binding protein 29 253 3.6E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS01990 25f4ba0a53ee44e24cfeb5440b2ecccd 279 Gene3D G3DSA:3.40.50.1980 26 146 5.0E-25 T 22-04-2016 YPTB_RS01990 25f4ba0a53ee44e24cfeb5440b2ecccd 279 Gene3D G3DSA:3.40.50.1980 147 275 4.1E-18 T 22-04-2016 YPTB_RS01990 25f4ba0a53ee44e24cfeb5440b2ecccd 279 SUPERFAMILY SSF53807 26 274 3.18E-49 T 22-04-2016 YPTB_RS00395 2885d32130f310100b8f87767952a358 456 Pfam PF01551 Peptidase family M23 357 450 8.0E-26 T 22-04-2016 IPR016047 Peptidase M23 YPTB_RS00395 2885d32130f310100b8f87767952a358 456 Gene3D G3DSA:2.70.70.10 319 455 2.0E-37 T 22-04-2016 YPTB_RS00395 2885d32130f310100b8f87767952a358 456 PANTHER PTHR21666 1 456 8.9E-227 T 22-04-2016 YPTB_RS00395 2885d32130f310100b8f87767952a358 456 SUPERFAMILY SSF51261 287 454 1.24E-46 T 22-04-2016 IPR011055 Duplicated hybrid motif YPTB_RS00395 2885d32130f310100b8f87767952a358 456 PANTHER PTHR21666:SF213 1 456 8.9E-227 T 22-04-2016 YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 Pfam PF00005 ABC transporter 18 165 6.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 Gene3D G3DSA:3.40.50.300 1 236 1.2E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 PIRSF PIRSF039085 1 241 3.3E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 PANTHER PTHR24220 3 240 2.7E-193 T 22-04-2016 YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 SMART SM00382 26 213 7.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 SUPERFAMILY SSF52540 1 235 3.17E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06085 d2f481ccbf5cb38f40e104270021ca8d 241 PANTHER PTHR24220:SF317 3 240 2.7E-193 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 YPTB_RS07705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YPTB_RS07705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 PANTHER PTHR33370 1 72 1.5E-49 T 22-04-2016 YPTB_RS07705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.8E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 YPTB_RS07705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 71 2.9E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YPTB_RS07705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPTB_RS07705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02930 2363b366f5d6e58b95ad4937c4ff6811 392 PIRSF PIRSF007313 1 360 1.2E-162 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YPTB_RS02930 2363b366f5d6e58b95ad4937c4ff6811 392 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 351 1.8E-155 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YPTB_RS00175 de3cbfafce235944bb90a6e7d18fa870 328 PANTHER PTHR39573 2 328 1.1E-199 T 22-04-2016 YPTB_RS00175 de3cbfafce235944bb90a6e7d18fa870 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.178 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPTB_RS00175 de3cbfafce235944bb90a6e7d18fa870 328 SUPERFAMILY SSF56112 6 327 6.85E-90 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS00175 de3cbfafce235944bb90a6e7d18fa870 328 PANTHER PTHR39573:SF1 2 328 1.1E-199 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPTB_RS00175 de3cbfafce235944bb90a6e7d18fa870 328 Gene3D G3DSA:3.30.200.20 36 106 4.5E-4 T 22-04-2016 YPTB_RS00175 de3cbfafce235944bb90a6e7d18fa870 328 Gene3D G3DSA:3.90.1200.10 107 325 3.4E-47 T 22-04-2016 YPTB_RS00175 de3cbfafce235944bb90a6e7d18fa870 328 Pfam PF01636 Phosphotransferase enzyme family 33 256 2.3E-46 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 PANTHER PTHR30559:SF0 1 342 9.0E-239 T 22-04-2016 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 PANTHER PTHR30559 1 342 9.0E-239 T 22-04-2016 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 1 341 2.9E-184 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 PIRSF PIRSF001359 1 342 4.9E-102 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 155 166 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 SUPERFAMILY SSF51569 2 340 5.27E-127 T 22-04-2016 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 340 1.4E-113 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 Pfam PF01116 Fructose-bisphosphate aldolase class-II 2 338 7.6E-89 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 Gene3D G3DSA:3.20.20.70 2 338 2.3E-122 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS17310 c0ce3d9ea6cd3ab7a4d63a9bb3380ead 342 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 84 95 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.165 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 9.1E-47 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 SUPERFAMILY SSF51735 1 306 4.79E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 Gene3D G3DSA:3.40.50.720 2 171 1.9E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 PANTHER PTHR10366:SF469 1 308 1.2E-129 T 22-04-2016 YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 7.3E-136 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 Gene3D G3DSA:3.90.25.10 172 290 1.9E-36 T 22-04-2016 YPTB_RS00375 90e898e94f58533fe189d8cc7a6d9aef 310 PANTHER PTHR10366 1 308 1.2E-129 T 22-04-2016 YPTB_RS11270 954e6506df7cccfd80fa026984519116 201 PIRSF PIRSF004982 17 197 3.3E-47 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YPTB_RS11270 954e6506df7cccfd80fa026984519116 201 Pfam PF03843 Outer membrane lipoprotein Slp family 30 174 2.6E-47 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YPTB_RS11270 954e6506df7cccfd80fa026984519116 201 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 27 196 3.6E-61 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YPTB_RS11270 954e6506df7cccfd80fa026984519116 201 PANTHER PTHR37530 11 201 1.8E-68 T 22-04-2016 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587 2 61 1.7E-13 T 22-04-2016 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587 98 173 1.7E-13 T 22-04-2016 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 Gene3D G3DSA:3.20.20.370 82 267 1.1E-31 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 Gene3D G3DSA:3.20.20.370 13 38 1.1E-31 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587:SF71 2 61 1.7E-13 T 22-04-2016 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587:SF71 98 173 1.7E-13 T 22-04-2016 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 SUPERFAMILY SSF88713 15 41 4.45E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 SUPERFAMILY SSF88713 86 267 4.45E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 Pfam PF01522 Polysaccharide deacetylase 17 170 2.4E-13 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS12685 7e0a8fe2246f804e353edc4e7cacd849 301 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 64.602 T 22-04-2016 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 UniPathway: UPA00030|UniPathway: UPA00036 YPTB_RS00670 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 SUPERFAMILY SSF53633 2 255 1.7E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS00670 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 Pfam PF00696 Amino acid kinase family 4 234 1.1E-39 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS00670 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.7E-73 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00670 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.646 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS00670 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 Gene3D G3DSA:3.40.1160.10 2 255 5.0E-78 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS00670 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 PANTHER PTHR23342 1 255 4.5E-99 T 22-04-2016 YPTB_RS00670 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 PIRSF PIRSF000728 1 257 5.1E-71 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS04685 6d3b1670648edf151bb2419bd7b8bd10 243 Gene3D G3DSA:1.25.40.10 34 205 4.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS04685 6d3b1670648edf151bb2419bd7b8bd10 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 1.2E-88 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD YPTB_RS04685 6d3b1670648edf151bb2419bd7b8bd10 243 SUPERFAMILY SSF48452 27 119 1.23E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS04685 6d3b1670648edf151bb2419bd7b8bd10 243 PANTHER PTHR37423 1 242 5.9E-119 T 22-04-2016 YPTB_RS04685 6d3b1670648edf151bb2419bd7b8bd10 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 48.126 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD YPTB_RS04685 6d3b1670648edf151bb2419bd7b8bd10 243 Pfam PF13525 Outer membrane lipoprotein 28 236 6.3E-84 T 22-04-2016 YPTB_RS13905 19bf57210be563d9495782c578aca76c 102 PANTHER PTHR35893 1 102 4.9E-67 T 22-04-2016 YPTB_RS13905 19bf57210be563d9495782c578aca76c 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 1.5E-30 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB YPTB_RS13905 19bf57210be563d9495782c578aca76c 102 PANTHER PTHR35893:SF1 1 102 4.9E-67 T 22-04-2016 YPTB_RS13325 a6ed23fbf037c1f6d7640a36ef16c13d 191 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 190 35.632 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YPTB_RS13325 a6ed23fbf037c1f6d7640a36ef16c13d 191 PANTHER PTHR40593 1 191 1.8E-101 T 22-04-2016 YPTB_RS13325 a6ed23fbf037c1f6d7640a36ef16c13d 191 Pfam PF13036 Peptidoglycan-synthase activator LpoB 8 188 2.2E-48 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YPTB_RS13325 a6ed23fbf037c1f6d7640a36ef16c13d 191 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 190 9.2E-59 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.913 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:1.10.1390.10 507 548 4.8E-22 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 8 98 5.7E-149 T 22-04-2016 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 293 506 5.7E-149 T 22-04-2016 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 SUPERFAMILY SSF53697 5 547 1.36E-227 T 22-04-2016 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 99 291 9.0E-91 T 22-04-2016 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PANTHER PTHR11469:SF11 1 548 0.0 T 22-04-2016 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PANTHER PTHR11469 1 548 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.7E-257 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS19725 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPTB_RS08395 f286c5b6dcd787918034bf58bae5c456 245 Gene3D G3DSA:3.40.50.620 38 169 1.9E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS08395 f286c5b6dcd787918034bf58bae5c456 245 PANTHER PTHR30336:SF0 2 242 5.4E-133 T 22-04-2016 YPTB_RS08395 f286c5b6dcd787918034bf58bae5c456 245 PIRSF PIRSF005011 1 245 5.6E-150 T 22-04-2016 IPR023604 Uncharacterised protein family SanA YPTB_RS08395 f286c5b6dcd787918034bf58bae5c456 245 PANTHER PTHR30336 2 242 5.4E-133 T 22-04-2016 YPTB_RS08395 f286c5b6dcd787918034bf58bae5c456 245 Pfam PF02698 DUF218 domain 48 170 1.5E-17 T 22-04-2016 IPR003848 Domain of unknown function DUF218 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 Gene3D G3DSA:3.90.1150.10 257 387 3.1E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 Gene3D G3DSA:3.40.640.10 11 256 1.6E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 386 5.6E-94 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 PANTHER PTHR11808:SF40 11 391 2.1E-211 T 22-04-2016 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 PANTHER PTHR11808 11 391 2.1E-211 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 SUPERFAMILY SSF53383 45 386 4.34E-82 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 PIRSF PIRSF001434 1 390 2.4E-106 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS01975 3f67f7a79117e38d1d31d05ff6d70eca 393 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 388 2.4E-134 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 YPTB_RS05985 f94daf86aa687638e9d453d7cd2b1a58 196 SMART SM00421 136 193 4.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS05985 f94daf86aa687638e9d453d7cd2b1a58 196 SUPERFAMILY SSF46894 132 193 2.62E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS05985 f94daf86aa687638e9d453d7cd2b1a58 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 192 3.6E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS05985 f94daf86aa687638e9d453d7cd2b1a58 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.8E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS05985 f94daf86aa687638e9d453d7cd2b1a58 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.8E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS05985 f94daf86aa687638e9d453d7cd2b1a58 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.8E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS05985 f94daf86aa687638e9d453d7cd2b1a58 196 Gene3D G3DSA:1.10.10.10 134 194 1.6E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 SMART SM00478 39 190 3.1E-52 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.1E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 PANTHER PTHR10359 10 343 3.6E-114 T 22-04-2016 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 Gene3D G3DSA:3.90.79.10 229 346 3.1E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 167 2.3E-21 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 5.9E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 SUPERFAMILY SSF48150 2 225 5.5E-79 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 Gene3D G3DSA:1.10.340.30 22 122 7.7E-46 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 SMART SM00525 191 211 2.6E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 SUPERFAMILY SSF55811 220 346 4.19E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 Gene3D G3DSA:1.10.1670.10 123 224 8.1E-41 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 276 3.6E-124 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 YPTB_RS17460 b5e6de2f6a9b27e2e42de32d12df6c83 371 Pfam PF14815 NUDIX domain 234 342 1.2E-22 T 22-04-2016 IPR029119 MutY, C-terminal YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 3.7E-116 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 PANTHER PTHR30270 1 329 6.4E-155 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 PANTHER PTHR30270:SF0 1 329 6.4E-155 T 22-04-2016 YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 SUPERFAMILY SSF56042 143 302 1.5E-38 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 3.6E-22 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.663 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 Gene3D G3DSA:3.90.650.10 146 322 1.6E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 SUPERFAMILY SSF55326 4 138 1.59E-34 T 22-04-2016 YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 PIRSF PIRSF005303 1 322 5.0E-91 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 Gene3D G3DSA:3.30.1330.10 3 140 2.0E-46 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPTB_RS05205 6360749d85dc9daf94b076171a54b535 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 262 3.0E-9 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 SUPERFAMILY SSF49863 915 1036 3.61E-41 T 22-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 641 893 1.3E-32 T 22-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 PANTHER PTHR37322:SF2 1 1037 0.0 T 22-04-2016 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 PANTHER PTHR37322 1 1037 0.0 T 22-04-2016 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 SUPERFAMILY SSF74650 635 909 1.2E-84 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Gene3D G3DSA:2.60.120.410 40 244 4.0E-76 T 22-04-2016 IPR015176 Lyase, N-terminal YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 916 977 5.9E-5 T 22-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 SUPERFAMILY SSF49785 34 244 1.87E-82 T 22-04-2016 IPR008979 Galactose-binding domain-like YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Gene3D G3DSA:1.50.10.100 248 633 3.3E-128 T 22-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Pfam PF09093 Lyase, catalytic 258 619 8.8E-132 T 22-04-2016 IPR015177 Lyase, catalytic YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Gene3D G3DSA:2.60.220.10 915 1036 2.4E-41 T 22-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 PIRSF PIRSF034515 5 1037 0.0 T 22-04-2016 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 SUPERFAMILY SSF48230 247 633 6.41E-154 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Pfam PF09092 Lyase, N terminal 47 242 1.8E-59 T 22-04-2016 IPR015176 Lyase, N-terminal YPTB_RS16635 67f7cb689524087b8dfb36affe9e25fd 1037 Gene3D G3DSA:2.70.98.10 635 907 1.3E-81 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPTB_RS16765 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 Gene3D G3DSA:1.10.3720.10 8 270 4.2E-64 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16765 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 SUPERFAMILY SSF161098 10 283 3.18E-68 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16765 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 PANTHER PTHR32243:SF34 5 283 1.8E-167 T 22-04-2016 YPTB_RS16765 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 276 3.7E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16765 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 PANTHER PTHR32243 5 283 1.8E-167 T 22-04-2016 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 372 394 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 206 221 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 294 308 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 322 337 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 430 445 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 257 277 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 503 519 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 478 494 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 SUPERFAMILY SSF51445 289 621 1.42E-108 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PANTHER PTHR22762:SF81 295 524 4.7E-58 T 22-04-2016 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 Gene3D G3DSA:3.20.20.70 291 575 8.0E-43 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 Pfam PF02065 Melibiase 254 592 2.5E-122 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 237 5.0E-44 T 22-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PANTHER PTHR22762 295 524 4.7E-58 T 22-04-2016 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 ProSitePatterns PS00512 Alpha-galactosidase signature. 323 338 - T 22-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS08855 61ca42aac09bb81a701135876943ac0c 708 PIRSF PIRSF005536 1 707 3.3E-256 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 SMART SM01329 6 355 3.9E-198 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 SUPERFAMILY SSF53659 2 359 4.03E-122 T 22-04-2016 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 Gene3D G3DSA:3.40.718.10 2 357 9.8E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.236 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 4.7E-135 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 1.2E-165 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 PANTHER PTHR11835:SF35 1 357 6.3E-203 T 22-04-2016 YPTB_RS03750 d1f1f5bc66f019fdad282bace19bf39e 363 PANTHER PTHR11835 1 357 6.3E-203 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 PANTHER PTHR32305:SF11 6 643 0.0 T 22-04-2016 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 PANTHER PTHR32305 6 643 0.0 T 22-04-2016 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 SUPERFAMILY SSF69349 544 730 3.14E-36 T 22-04-2016 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 SUPERFAMILY SSF69279 114 289 2.81E-56 T 22-04-2016 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 Pfam PF05954 Phage late control gene D protein (GPD) 134 431 2.8E-83 T 22-04-2016 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 SUPERFAMILY SSF69279 293 467 7.82E-42 T 22-04-2016 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 SUPERFAMILY SSF69255 466 553 6.02E-34 T 22-04-2016 YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 114 620 3.7E-201 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 126 605 4.9E-192 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 Gene3D G3DSA:2.40.50.230 472 553 5.4E-41 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS19555 5a8ba11f8ec683b9f9aa3e83e5b7b850 732 Gene3D G3DSA:3.55.50.10 202 294 2.3E-35 T 22-04-2016 YPTB_RS04120 e490fbe234332cbb1bad0e02693c5818 264 Pfam PF00005 ABC transporter 26 175 2.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS04120 e490fbe234332cbb1bad0e02693c5818 264 SMART SM00382 35 223 3.9E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04120 e490fbe234332cbb1bad0e02693c5818 264 Gene3D G3DSA:3.40.50.300 13 239 2.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04120 e490fbe234332cbb1bad0e02693c5818 264 PANTHER PTHR24220 12 259 1.7E-141 T 22-04-2016 YPTB_RS04120 e490fbe234332cbb1bad0e02693c5818 264 PANTHER PTHR24220:SF266 12 259 1.7E-141 T 22-04-2016 YPTB_RS04120 e490fbe234332cbb1bad0e02693c5818 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS04120 e490fbe234332cbb1bad0e02693c5818 264 SUPERFAMILY SSF52540 13 237 3.41E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17825 06c352a5d33686c2a9a9a381d93b4709 356 SUPERFAMILY SSF51735 4 137 1.96E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17825 06c352a5d33686c2a9a9a381d93b4709 356 Gene3D G3DSA:3.40.50.720 5 152 4.0E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17825 06c352a5d33686c2a9a9a381d93b4709 356 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 80 3.9E-9 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 Gene3D G3DSA:3.90.180.10 10 192 1.6E-48 T 22-04-2016 IPR011032 GroES-like YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 PANTHER PTHR11695 30 369 5.0E-201 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 Pfam PF00107 Zinc-binding dehydrogenase 202 318 1.2E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 SMART SM00829 26 366 0.0013 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 SUPERFAMILY SSF51735 168 321 2.14E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 43 154 8.1E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 85 99 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 SUPERFAMILY SSF50129 18 197 6.45E-47 T 22-04-2016 IPR011032 GroES-like YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 PANTHER PTHR11695:SF583 30 369 5.0E-201 T 22-04-2016 YPTB_RS04335 c1eff63ed71c29b33b78eb59d217df35 371 Gene3D G3DSA:3.40.50.720 193 314 5.5E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07545 5913a79e5ec716de6bebdc61064e6c53 154 Pfam PF10767 Protein of unknown function (DUF2593) 11 148 2.5E-62 T 22-04-2016 IPR019703 Protein of unknown function DUF2593 YPTB_RS19295 4ead6a93280a81ddd9b2ee49ec5edf9d 366 Pfam PF00174 Oxidoreductase molybdopterin binding domain 140 299 2.6E-27 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YPTB_RS19295 4ead6a93280a81ddd9b2ee49ec5edf9d 366 PANTHER PTHR19372:SF1 1 361 4.1E-228 T 22-04-2016 YPTB_RS19295 4ead6a93280a81ddd9b2ee49ec5edf9d 366 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 36 366 60.903 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 YPTB_RS19295 4ead6a93280a81ddd9b2ee49ec5edf9d 366 SUPERFAMILY SSF56524 103 362 8.37E-93 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YPTB_RS19295 4ead6a93280a81ddd9b2ee49ec5edf9d 366 Gene3D G3DSA:3.90.420.10 104 364 9.6E-74 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YPTB_RS19295 4ead6a93280a81ddd9b2ee49ec5edf9d 366 PANTHER PTHR19372 1 361 4.1E-228 T 22-04-2016 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 PANTHER PTHR22594:SF7 14 322 3.5E-159 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.575 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.5E-129 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 5.9E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 5.9E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 SUPERFAMILY SSF55681 13 322 5.36E-82 T 22-04-2016 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 PANTHER PTHR22594 14 322 3.5E-159 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 322 1.9E-45 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS02380 53ccdaf13b1003d691aae5f34d970a6c 325 Gene3D G3DSA:3.30.930.10 14 321 3.5E-71 T 22-04-2016 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 Pfam PF01416 tRNA pseudouridine synthase 154 256 1.4E-28 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 Pfam PF01416 tRNA pseudouridine synthase 20 115 9.2E-11 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 PIRSF PIRSF001430 13 264 3.4E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 13 255 34.516 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 14 250 1.7E-75 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 SUPERFAMILY SSF55120 14 269 9.06E-91 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 Gene3D G3DSA:3.30.70.660 118 253 1.4E-45 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 PANTHER PTHR11142 13 271 3.5E-101 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS14195 b5d7785bcd01392e1263c5cf37028347 276 Gene3D G3DSA:3.30.70.580 14 116 2.7E-37 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 16 461 9.7E-140 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 SUPERFAMILY SSF55021 308 369 7.44E-14 T 22-04-2016 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 ProSitePatterns PS00324 Aspartokinase signature. 18 26 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 PANTHER PTHR21499 7 461 3.7E-143 T 22-04-2016 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 SUPERFAMILY SSF55021 389 460 1.72E-14 T 22-04-2016 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 Gene3D G3DSA:3.40.1160.10 15 65 7.5E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 Gene3D G3DSA:3.40.1160.10 118 304 7.5E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 PANTHER PTHR21499:SF3 7 461 3.7E-143 T 22-04-2016 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 Pfam PF00696 Amino acid kinase family 16 289 6.0E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 460 1.9E-131 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 PIRSF PIRSF000726 14 461 2.1E-150 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPTB_RS19730 cfc85d49bad720916418facb6fa150dd 461 SUPERFAMILY SSF53633 16 304 6.28E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS02015 d7be0d1a8b7cf31ddc1abd8ff16d08ee 175 PIRSF PIRSF030840 1 168 1.3E-89 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YPTB_RS02015 d7be0d1a8b7cf31ddc1abd8ff16d08ee 175 Pfam PF06228 Haem utilisation ChuX/HutX 28 162 1.7E-33 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YPTB_RS02015 d7be0d1a8b7cf31ddc1abd8ff16d08ee 175 Gene3D G3DSA:3.40.1570.10 2 168 7.4E-72 T 22-04-2016 YPTB_RS02015 d7be0d1a8b7cf31ddc1abd8ff16d08ee 175 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 12 162 7.7E-65 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YPTB_RS02015 d7be0d1a8b7cf31ddc1abd8ff16d08ee 175 SUPERFAMILY SSF144064 4 166 2.09E-52 T 22-04-2016 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 PANTHER PTHR21091 1 350 9.6E-162 T 22-04-2016 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 SUPERFAMILY SSF51726 2 353 2.27E-121 T 22-04-2016 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 PANTHER PTHR21091:SF2 1 350 9.6E-162 T 22-04-2016 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 4.0E-142 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 Gene3D G3DSA:3.20.20.210 2 353 4.6E-157 T 22-04-2016 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 3.6E-136 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS01745 2023d07b54a989c8e7ac4d4abea7976a 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.418 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 Gene3D G3DSA:3.40.50.300 456 632 3.3E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 SUPERFAMILY SSF52540 220 440 3.67E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 SUPERFAMILY SSF52540 503 601 3.67E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 2.7E-205 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 2.1E-5 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 PANTHER PTHR30580 1 731 7.5E-296 T 22-04-2016 YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 Pfam PF00270 DEAD/DEAH box helicase 203 364 9.3E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 Gene3D G3DSA:3.40.50.300 198 380 6.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 SMART SM00490 492 589 9.2E-8 T 22-04-2016 IPR001650 Helicase, C-terminal YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.589 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YPTB_RS00610 1b196b44bcdf20100f2c8bf5bae98e5a 732 SMART SM00487 195 395 5.0E-17 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS01050 4990f90bbc7559b5a0313b06b072b9ee 245 SUPERFAMILY SSF55729 43 238 1.17E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS01050 4990f90bbc7559b5a0313b06b072b9ee 245 Pfam PF00583 Acetyltransferase (GNAT) family 160 232 9.0E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS01050 4990f90bbc7559b5a0313b06b072b9ee 245 PANTHER PTHR23091 100 238 1.5E-19 T 22-04-2016 YPTB_RS01050 4990f90bbc7559b5a0313b06b072b9ee 245 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 244 2.1E-108 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 YPTB_RS01050 4990f90bbc7559b5a0313b06b072b9ee 245 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 244 46.59 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 YPTB_RS01050 4990f90bbc7559b5a0313b06b072b9ee 245 Gene3D G3DSA:3.40.630.30 89 238 1.2E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 SUPERFAMILY SSF117892 127 258 4.18E-20 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 Pfam PF01145 SPFH domain / Band 7 family 98 269 9.1E-31 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 TIGRFAM TIGR01933 hflK: HflK protein 96 355 9.8E-121 T 22-04-2016 IPR010201 HflK GO:0016021 YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 PANTHER PTHR10264 13 390 3.7E-209 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 Pfam PF12221 Bacterial membrane protein N terminal 1 60 4.7E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 PRINTS PR00721 Stomatin signature 101 123 1.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 PRINTS PR00721 Stomatin signature 148 169 1.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 PRINTS PR00721 Stomatin signature 183 200 1.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 PANTHER PTHR10264:SF51 13 390 3.7E-209 T 22-04-2016 IPR010201 HflK GO:0016021 YPTB_RS02470 52b9f73b19e433e63cf9b7c672b1ac6d 420 SMART SM00244 94 254 7.6E-43 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS21080 234ee682df3f55ce473fa8651415df5e 111 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 1.2E-15 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 YPTB_RS02355 48cc513ee034453d5ceb1da451c76c5b 118 PIRSF PIRSF000179 1 118 2.5E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPTB_RS02355 48cc513ee034453d5ceb1da451c76c5b 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 26.641 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPTB_RS02355 48cc513ee034453d5ceb1da451c76c5b 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 2.0E-48 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPTB_RS02355 48cc513ee034453d5ceb1da451c76c5b 118 Pfam PF02313 Fumarate reductase subunit D 5 116 2.1E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPTB_RS02355 48cc513ee034453d5ceb1da451c76c5b 118 SUPERFAMILY SSF81343 1 118 1.16E-51 T 22-04-2016 YPTB_RS02355 48cc513ee034453d5ceb1da451c76c5b 118 Gene3D G3DSA:1.20.1300.10 2 118 2.3E-54 T 22-04-2016 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 Gene3D G3DSA:3.30.1550.10 2 72 5.0E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 8.8E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 SMART SM00649 9 141 1.3E-82 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 22-04-2016 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.272 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 9.5E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 Gene3D G3DSA:1.10.10.250 73 141 3.3E-30 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 PANTHER PTHR11661 1 142 1.2E-74 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 SUPERFAMILY SSF46906 68 141 3.53E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 SUPERFAMILY SSF54747 3 73 2.49E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YPTB_RS01660 1f1e2715f761021b0e104791c4b68765 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.7E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YPTB_RS00495 d67835e9290ffd49bd023da7c8602a13 245 Gene3D G3DSA:3.40.50.10320 6 243 8.0E-48 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain YPTB_RS00495 d67835e9290ffd49bd023da7c8602a13 245 PANTHER PTHR12993:SF11 1 228 2.1E-59 T 22-04-2016 YPTB_RS00495 d67835e9290ffd49bd023da7c8602a13 245 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 138 3.8E-22 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPTB_RS00495 d67835e9290ffd49bd023da7c8602a13 245 SUPERFAMILY SSF102588 6 244 1.01E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain YPTB_RS00495 d67835e9290ffd49bd023da7c8602a13 245 PANTHER PTHR12993 1 228 2.1E-59 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 Pfam PF00462 Glutaredoxin 4 63 4.9E-25 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 Gene3D G3DSA:3.40.30.10 1 73 1.7E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 PANTHER PTHR10168 3 82 1.9E-31 T 22-04-2016 YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 60 73 2.5E-17 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 46 59 2.5E-17 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 4 22 2.5E-17 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 7.3E-37 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 YPTB_RS00410 5bc3aad8df72deac04cf0c261d1a961f 82 SUPERFAMILY SSF52833 1 82 1.14E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS07745 9ff00a98206223fc4824a56760b99352 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 202 1.3E-97 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YPTB_RS07745 9ff00a98206223fc4824a56760b99352 202 PANTHER PTHR35869 1 202 4.3E-64 T 22-04-2016 YPTB_RS07745 9ff00a98206223fc4824a56760b99352 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 201 32.008 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YPTB_RS07745 9ff00a98206223fc4824a56760b99352 202 Gene3D G3DSA:2.50.20.10 23 202 1.1E-59 T 22-04-2016 YPTB_RS07745 9ff00a98206223fc4824a56760b99352 202 SUPERFAMILY SSF89392 23 202 9.02E-56 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPTB_RS07745 9ff00a98206223fc4824a56760b99352 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 191 8.2E-58 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 22-04-2016 IPR025505 FHIPEP conserved site YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PANTHER PTHR30161:SF3 1 676 0.0 T 22-04-2016 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 Pfam PF00771 FHIPEP family 31 665 2.6E-218 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 8.3E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 8.3E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 8.3E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 8.3E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 8.3E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 8.3E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PANTHER PTHR30161 1 676 0.0 T 22-04-2016 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 PIRSF PIRSF005419 3 678 3.2E-226 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS01910 8c8041e2013a90511fd2733e1ed4d8e2 684 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 18 673 4.8E-270 T 22-04-2016 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 YPTB_RS13795 20ce36a8d94e78aa4228a8d636d9e093 312 SUPERFAMILY SSF161111 16 223 3.53E-34 T 22-04-2016 YPTB_RS13795 20ce36a8d94e78aa4228a8d636d9e093 312 PANTHER PTHR11562:SF17 9 311 4.8E-43 T 22-04-2016 YPTB_RS13795 20ce36a8d94e78aa4228a8d636d9e093 312 Pfam PF01545 Cation efflux family 22 221 1.6E-33 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS13795 20ce36a8d94e78aa4228a8d636d9e093 312 PANTHER PTHR11562 9 311 4.8E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPTB_RS13795 20ce36a8d94e78aa4228a8d636d9e093 312 Gene3D G3DSA:1.20.1510.10 19 221 4.2E-26 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF05860 haemagglutination activity domain 74 207 9.7E-32 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 6.2E-21 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 PANTHER PTHR32093 2466 2474 7.6E-136 T 22-04-2016 YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 PANTHER PTHR32093 1 552 7.6E-136 T 22-04-2016 YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 SUPERFAMILY SSF51126 77 350 8.79E-66 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Gene3D G3DSA:2.160.20.10 76 367 2.2E-99 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 SMART SM00912 88 208 4.0E-45 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF05594 Haemagluttinin repeat 1210 1268 3.3 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF05594 Haemagluttinin repeat 316 373 1.8E-4 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF05594 Haemagluttinin repeat 680 740 0.074 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF05594 Haemagluttinin repeat 929 970 67.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF04829 Pre-toxin domain with VENN motif 2279 2329 1.9E-22 T 22-04-2016 IPR006914 VENN motif-containing domain YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 513 544 0.019 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 388 2.0E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1235 1272 0.013 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 702 733 1.3 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 837 863 0.063 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 641 671 0.096 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 621 659 0.062 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 5.6E-6 T 22-04-2016 IPR024973 ESPR domain YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 PANTHER PTHR32093:SF41 2466 2474 7.6E-136 T 22-04-2016 YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 PANTHER PTHR32093:SF41 1 552 7.6E-136 T 22-04-2016 YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF13332 Haemagluttinin repeat 1522 1678 4.9E-9 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF13332 Haemagluttinin repeat 1455 1520 5.7E-4 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS13725 51c060b2a448f967c18b6587d733980a 2531 Pfam PF13332 Haemagluttinin repeat 1750 1925 1.1E-42 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS02960 8b33b60a5500f156f54da87155155358 238 SMART SM00382 32 220 2.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS02960 8b33b60a5500f156f54da87155155358 238 Pfam PF00005 ABC transporter 24 171 4.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS02960 8b33b60a5500f156f54da87155155358 238 PANTHER PTHR24220 5 230 6.8E-103 T 22-04-2016 YPTB_RS02960 8b33b60a5500f156f54da87155155358 238 PANTHER PTHR24220:SF81 5 230 6.8E-103 T 22-04-2016 YPTB_RS02960 8b33b60a5500f156f54da87155155358 238 SUPERFAMILY SSF52540 3 232 1.33E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02960 8b33b60a5500f156f54da87155155358 238 Gene3D G3DSA:3.40.50.300 3 233 8.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02960 8b33b60a5500f156f54da87155155358 238 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 Gene3D G3DSA:3.40.390.10 360 504 2.0E-61 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 PANTHER PTHR11804:SF8 3 678 0.0 T 22-04-2016 YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 Gene3D G3DSA:1.20.1050.40 7 138 4.1E-27 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 Gene3D G3DSA:1.10.1370.10 505 678 2.0E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 Gene3D G3DSA:1.10.1370.10 140 349 2.0E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 PANTHER PTHR11804 3 678 0.0 T 22-04-2016 YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 Pfam PF01432 Peptidase family M3 222 677 3.4E-168 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 YPTB_RS20635 67a6b2741175fc5021d0fa2310625b80 680 SUPERFAMILY SSF55486 1 677 3.24E-215 T 22-04-2016 YPTB_RS14925 e6301cecabd54f763475bc38ad36d8db 141 SUPERFAMILY SSF55729 1 130 8.1E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS14925 e6301cecabd54f763475bc38ad36d8db 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 56.391 T 22-04-2016 IPR023072 Acetyltransferase, YpeA GO:0016747 YPTB_RS14925 e6301cecabd54f763475bc38ad36d8db 141 PANTHER PTHR23091:SF274 1 129 2.1E-25 T 22-04-2016 YPTB_RS14925 e6301cecabd54f763475bc38ad36d8db 141 Gene3D G3DSA:3.40.630.30 1 121 1.5E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS14925 e6301cecabd54f763475bc38ad36d8db 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 4.5E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS14925 e6301cecabd54f763475bc38ad36d8db 141 PANTHER PTHR23091 1 129 2.1E-25 T 22-04-2016 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 PANTHER PTHR35037 722 1449 0.0 T 22-04-2016 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 PANTHER PTHR35037 59 667 0.0 T 22-04-2016 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 PANTHER PTHR35037 686 696 0.0 T 22-04-2016 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 SUPERFAMILY SSF51126 794 1145 1.19E-20 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 SUPERFAMILY SSF103515 1159 1449 2.48E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 Gene3D G3DSA:2.160.20.20 766 1145 7.1E-46 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 Pfam PF03212 Pertactin 1037 1144 1.6E-13 T 22-04-2016 IPR004899 Pertactin, central region YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 Gene3D G3DSA:2.40.128.130 1149 1449 3.4E-66 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 PANTHER PTHR35037:SF1 722 1449 0.0 T 22-04-2016 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 PANTHER PTHR35037:SF1 59 667 0.0 T 22-04-2016 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 PANTHER PTHR35037:SF1 686 696 0.0 T 22-04-2016 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 Pfam PF03797 Autotransporter beta-domain 1188 1427 3.0E-39 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1050 1449 1.5E-100 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS15410 2d3096f3ee59dba44387f88b44708232 1449 SMART SM00869 1188 1438 2.4E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 PIRSF PIRSF005901 1 190 7.6E-60 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.424 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.7E-17 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.30.30.30 1 64 1.2E-14 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 PANTHER PTHR30053 1 190 9.6E-134 T 22-04-2016 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 1.6E-96 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50249 132 189 2.68E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50249 67 130 3.68E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 4.7E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 PANTHER PTHR30053:SF5 1 190 9.6E-134 T 22-04-2016 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 SMART SM01185 69 125 3.6E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 SMART SM00841 133 188 8.3E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.40.50.140 67 131 2.3E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.40.50.140 132 189 1.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50104 1 64 1.56E-10 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 6.0E-16 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 YPTB_RS07285 4679b86f3f5e18ad0d0f2d97640b8a52 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 YPTB_RS20310 5937ed14835c5ee182f1e8e0895a523b 181 Gene3D G3DSA:3.90.79.10 8 180 7.8E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS20310 5937ed14835c5ee182f1e8e0895a523b 181 SUPERFAMILY SSF55811 3 179 9.88E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS20310 5937ed14835c5ee182f1e8e0895a523b 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS20310 5937ed14835c5ee182f1e8e0895a523b 181 PANTHER PTHR11839 1 181 1.6E-106 T 22-04-2016 YPTB_RS20310 5937ed14835c5ee182f1e8e0895a523b 181 Pfam PF00293 NUDIX domain 46 139 1.0E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS20310 5937ed14835c5ee182f1e8e0895a523b 181 PANTHER PTHR11839:SF12 1 181 1.6E-106 T 22-04-2016 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 SUPERFAMILY SSF51569 7 335 1.42E-143 T 22-04-2016 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.4E-139 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 SMART SM01004 9 333 1.2E-239 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PANTHER PTHR11458 1 340 1.3E-191 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 PIRSF PIRSF001415 2 336 4.4E-154 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01525 1f36be251c3ea54df3195f90e5550a5b 340 Gene3D G3DSA:3.20.20.70 9 336 6.8E-152 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS20810 20fcd76036fbbe3a42dfc359870c56ed 487 Gene3D G3DSA:3.40.50.1820 111 342 5.6E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20810 20fcd76036fbbe3a42dfc359870c56ed 487 SUPERFAMILY SSF53474 74 235 1.91E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20810 20fcd76036fbbe3a42dfc359870c56ed 487 SUPERFAMILY SSF53474 302 342 1.91E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20810 20fcd76036fbbe3a42dfc359870c56ed 487 PANTHER PTHR11614:SF89 48 342 9.2E-132 T 22-04-2016 YPTB_RS20810 20fcd76036fbbe3a42dfc359870c56ed 487 Pfam PF12146 Serine aminopeptidase, S33 118 237 1.5E-10 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YPTB_RS20810 20fcd76036fbbe3a42dfc359870c56ed 487 PANTHER PTHR11614 48 342 9.2E-132 T 22-04-2016 YPTB_RS08925 5dae813020dd389ff3d3ac3833635f51 94 Pfam PF13974 YebO-like protein 20 94 6.3E-29 T 22-04-2016 IPR025594 YebO-like protein YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 Gene3D G3DSA:3.40.640.10 66 283 2.8E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 10 402 1.1E-216 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 Pfam PF00155 Aminotransferase class I and II 48 392 8.0E-79 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 PANTHER PTHR13693:SF60 12 402 1.6E-264 T 22-04-2016 YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 PANTHER PTHR13693 12 402 1.6E-264 T 22-04-2016 YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 SUPERFAMILY SSF53383 9 401 8.64E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 7 400 53.471 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 YPTB_RS00380 ca9de5a63958c6db9f22191bfd914379 403 Gene3D G3DSA:3.90.1150.10 284 398 2.9E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 SUPERFAMILY SSF51735 4 245 3.95E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PANTHER PTHR24321:SF5 1 246 1.9E-191 T 22-04-2016 YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 Gene3D G3DSA:3.40.50.720 2 245 1.4E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 5.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 5.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PANTHER PTHR24321 1 246 1.9E-191 T 22-04-2016 YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 5.5E-57 T 22-04-2016 YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08665 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS19100 a244dc774694a26f5d2637ed2bd321f3 284 PANTHER PTHR30448:SF0 1 283 1.5E-157 T 22-04-2016 YPTB_RS19100 a244dc774694a26f5d2637ed2bd321f3 284 Gene3D G3DSA:3.40.50.300 2 150 8.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19100 a244dc774694a26f5d2637ed2bd321f3 284 Pfam PF03668 P-loop ATPase protein family 1 282 5.9E-144 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YPTB_RS19100 a244dc774694a26f5d2637ed2bd321f3 284 SUPERFAMILY SSF52540 2 151 3.19E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19100 a244dc774694a26f5d2637ed2bd321f3 284 PANTHER PTHR30448 1 283 1.5E-157 T 22-04-2016 YPTB_RS19100 a244dc774694a26f5d2637ed2bd321f3 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.858 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YPTB_RS19100 a244dc774694a26f5d2637ed2bd321f3 284 PIRSF PIRSF005052 1 284 4.7E-114 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YPTB_RS18505 96a186e1a8306d24e60504f6bb6b9c9b 458 PANTHER PTHR34319 274 458 2.1E-262 T 22-04-2016 YPTB_RS18505 96a186e1a8306d24e60504f6bb6b9c9b 458 PANTHER PTHR34319 2 206 2.1E-262 T 22-04-2016 YPTB_RS18505 96a186e1a8306d24e60504f6bb6b9c9b 458 SUPERFAMILY SSF54060 321 424 3.53E-23 T 22-04-2016 YPTB_RS18505 96a186e1a8306d24e60504f6bb6b9c9b 458 PIRSF PIRSF011452 1 458 2.2E-216 T 22-04-2016 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type YPTB_RS18505 96a186e1a8306d24e60504f6bb6b9c9b 458 PANTHER PTHR34319:SF1 274 458 2.1E-262 T 22-04-2016 YPTB_RS18505 96a186e1a8306d24e60504f6bb6b9c9b 458 PANTHER PTHR34319:SF1 2 206 2.1E-262 T 22-04-2016 YPTB_RS11775 79410f6b98172dd158f05ac0ecfbe802 101 Pfam PF04328 Protein of unknown function (DUF466) 38 101 1.2E-24 T 22-04-2016 IPR007423 Protein of unknown function DUF466 YPTB_RS11775 79410f6b98172dd158f05ac0ecfbe802 101 PANTHER PTHR38453:SF1 26 100 2.6E-48 T 22-04-2016 YPTB_RS11775 79410f6b98172dd158f05ac0ecfbe802 101 PANTHER PTHR38453 26 100 2.6E-48 T 22-04-2016 YPTB_RS11300 237dadbe122640e0e1b2bca9c57ad6ee 90 PANTHER PTHR38109 2 87 4.3E-40 T 22-04-2016 YPTB_RS11300 237dadbe122640e0e1b2bca9c57ad6ee 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 1.0E-42 T 22-04-2016 IPR027354 YcgL domain YPTB_RS11300 237dadbe122640e0e1b2bca9c57ad6ee 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.625 T 22-04-2016 IPR027354 YcgL domain YPTB_RS11300 237dadbe122640e0e1b2bca9c57ad6ee 90 Pfam PF05166 YcgL domain 3 75 1.6E-33 T 22-04-2016 IPR027354 YcgL domain YPTB_RS11300 237dadbe122640e0e1b2bca9c57ad6ee 90 SUPERFAMILY SSF160191 1 87 1.57E-38 T 22-04-2016 YPTB_RS17000 b4e58d369cd6fb226ac1c3a3296aae97 108 Pfam PF04606 Ogr/Delta-like zinc finger 27 72 6.7E-16 T 22-04-2016 IPR007684 Zinc finger, Ogr/Delta-type YPTB_RS03430 aed88835e531829dfef753edda9caa11 818 SUPERFAMILY SSF55729 713 816 4.38E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS03430 aed88835e531829dfef753edda9caa11 818 Gene3D G3DSA:3.40.630.30 714 814 2.1E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS03430 aed88835e531829dfef753edda9caa11 818 SUPERFAMILY SSF49695 30 210 4.15E-17 T 22-04-2016 IPR011024 Gamma-crystallin-related YPTB_RS03430 aed88835e531829dfef753edda9caa11 818 Gene3D G3DSA:2.60.20.10 113 213 4.5E-21 T 22-04-2016 YPTB_RS03430 aed88835e531829dfef753edda9caa11 818 Gene3D G3DSA:2.60.20.10 28 112 1.1E-20 T 22-04-2016 YPTB_RS14460 38d5676a2986e5b7cea3e0fa37c7bfca 512 PANTHER PTHR30451 27 509 1.7E-138 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14460 38d5676a2986e5b7cea3e0fa37c7bfca 512 SUPERFAMILY SSF141729 61 186 3.27E-28 T 22-04-2016 YPTB_RS14460 38d5676a2986e5b7cea3e0fa37c7bfca 512 Pfam PF00577 Outer membrane usher protein 234 509 7.5E-95 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS14460 38d5676a2986e5b7cea3e0fa37c7bfca 512 PANTHER PTHR30451:SF1 27 509 1.7E-138 T 22-04-2016 YPTB_RS14460 38d5676a2986e5b7cea3e0fa37c7bfca 512 Pfam PF13954 PapC N-terminal domain 62 208 2.6E-37 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS10825 115ed8facbf74211e72c1967278f9b13 428 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 3 424 2.0E-176 T 22-04-2016 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related YPTB_RS10825 115ed8facbf74211e72c1967278f9b13 428 PANTHER PTHR36932:SF2 5 428 6.0E-178 T 22-04-2016 YPTB_RS10825 115ed8facbf74211e72c1967278f9b13 428 PANTHER PTHR36932 5 428 6.0E-178 T 22-04-2016 YPTB_RS17265 066f8c61ca88b7c6ee170bc042f943bd 109 SUPERFAMILY SSF102829 6 94 1.96E-23 T 22-04-2016 IPR007838 Cell division protein ZapA-like YPTB_RS17265 066f8c61ca88b7c6ee170bc042f943bd 109 PANTHER PTHR34981:SF1 2 109 7.9E-31 T 22-04-2016 YPTB_RS17265 066f8c61ca88b7c6ee170bc042f943bd 109 PANTHER PTHR34981 2 109 7.9E-31 T 22-04-2016 YPTB_RS17265 066f8c61ca88b7c6ee170bc042f943bd 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 32.76 T 22-04-2016 IPR023771 Cell division protein ZapA, eubacteria YPTB_RS17265 066f8c61ca88b7c6ee170bc042f943bd 109 Pfam PF05164 Cell division protein ZapA 6 90 2.0E-17 T 22-04-2016 IPR007838 Cell division protein ZapA-like YPTB_RS16575 73fb48d2caff48508292b64b710240db 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 21 6.7E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS16575 73fb48d2caff48508292b64b710240db 180 Gene3D G3DSA:3.55.40.10 38 172 3.4E-8 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 YPTB_RS16575 73fb48d2caff48508292b64b710240db 180 PRINTS PR00885 Bacterial general secretion pathway protein H signature 139 154 7.3E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YPTB_RS16575 73fb48d2caff48508292b64b710240db 180 PRINTS PR00885 Bacterial general secretion pathway protein H signature 3 17 7.3E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YPTB_RS16575 73fb48d2caff48508292b64b710240db 180 PRINTS PR00885 Bacterial general secretion pathway protein H signature 18 32 7.3E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YPTB_RS16140 f43dfcf6a7f0ac089151baed746c1163 138 Gene3D G3DSA:3.30.160.200 5 107 2.0E-31 T 22-04-2016 YPTB_RS16140 f43dfcf6a7f0ac089151baed746c1163 138 Pfam PF00472 RF-1 domain 6 131 2.2E-23 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPTB_RS16140 f43dfcf6a7f0ac089151baed746c1163 138 SUPERFAMILY SSF75620 8 115 1.88E-13 T 22-04-2016 YPTB_RS16140 f43dfcf6a7f0ac089151baed746c1163 138 PANTHER PTHR11075 14 135 7.0E-40 T 22-04-2016 YPTB_RS16140 f43dfcf6a7f0ac089151baed746c1163 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 SUPERFAMILY SSF46689 6 72 2.33E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 70 2.6E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 Gene3D G3DSA:3.40.50.10490 61 240 1.5E-31 T 22-04-2016 YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 SUPERFAMILY SSF53697 86 230 3.4E-31 T 22-04-2016 YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 Pfam PF01380 SIS domain 108 214 9.6E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 PANTHER PTHR10937:SF9 6 244 1.2E-75 T 22-04-2016 YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 Gene3D G3DSA:1.10.10.10 7 60 3.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07135 809da73c5753701a3e950a595ac8c761 246 PANTHER PTHR10937 6 244 1.2E-75 T 22-04-2016 YPTB_RS02605 15c00941dae8fa3fcbce1993fe6f1861 118 PANTHER PTHR12510:SF6 1 116 8.1E-73 T 22-04-2016 YPTB_RS02605 15c00941dae8fa3fcbce1993fe6f1861 118 SUPERFAMILY SSF110857 1 112 1.31E-33 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like YPTB_RS02605 15c00941dae8fa3fcbce1993fe6f1861 118 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.9E-23 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YPTB_RS02605 15c00941dae8fa3fcbce1993fe6f1861 118 PANTHER PTHR12510 1 116 8.1E-73 T 22-04-2016 YPTB_RS02605 15c00941dae8fa3fcbce1993fe6f1861 118 Gene3D G3DSA:3.10.490.10 1 114 4.0E-39 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like YPTB_RS03870 0783bb88ca04f9353619b560c4e3474b 275 Pfam PF03799 Cell division protein FtsQ 130 244 2.7E-25 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB YPTB_RS03870 0783bb88ca04f9353619b560c4e3474b 275 PANTHER PTHR35851:SF1 7 269 1.7E-85 T 22-04-2016 YPTB_RS03870 0783bb88ca04f9353619b560c4e3474b 275 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.446 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 YPTB_RS03870 0783bb88ca04f9353619b560c4e3474b 275 Pfam PF08478 POTRA domain, FtsQ-type 57 126 3.3E-22 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type YPTB_RS03870 0783bb88ca04f9353619b560c4e3474b 275 PANTHER PTHR35851 7 269 1.7E-85 T 22-04-2016 YPTB_RS10645 03dfad23166572e441670fdc928e761b 639 Pfam PF03239 Iron permease FTR1 family 156 556 5.0E-95 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPTB_RS10645 03dfad23166572e441670fdc928e761b 639 PANTHER PTHR31632:SF4 368 613 3.0E-125 T 22-04-2016 YPTB_RS10645 03dfad23166572e441670fdc928e761b 639 PANTHER PTHR31632 368 613 3.0E-125 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPTB_RS19270 0dc480732a47a4358e2da933e8dfe827 162 PANTHER PTHR37484 1 162 4.0E-75 T 22-04-2016 YPTB_RS19270 0dc480732a47a4358e2da933e8dfe827 162 Pfam PF04093 rod shape-determining protein MreD 7 154 1.1E-43 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YPTB_RS19270 0dc480732a47a4358e2da933e8dfe827 162 PIRSF PIRSF018472 2 162 9.6E-58 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPTB_RS19270 0dc480732a47a4358e2da933e8dfe827 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 7.5E-43 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YPTB_RS17675 f0ed98a0fc18fd6c361bef27d2ec76f6 582 PANTHER PTHR34384 1 582 0.0 T 22-04-2016 YPTB_RS17675 f0ed98a0fc18fd6c361bef27d2ec76f6 582 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 551 5.4E-35 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPTB_RS17675 f0ed98a0fc18fd6c361bef27d2ec76f6 582 PANTHER PTHR34384:SF2 1 582 0.0 T 22-04-2016 YPTB_RS17675 f0ed98a0fc18fd6c361bef27d2ec76f6 582 Pfam PF04183 IucA / IucC family 132 374 4.0E-68 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 Gene3D G3DSA:1.10.40.30 411 462 6.8E-19 T 22-04-2016 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 Pfam PF00206 Lyase 13 345 3.0E-110 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PANTHER PTHR11444:SF25 1 477 0.0 T 22-04-2016 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 Gene3D G3DSA:1.20.200.10 143 405 5.8E-87 T 22-04-2016 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.5E-17 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 7.1E-264 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 SUPERFAMILY SSF48557 2 458 5.45E-142 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PANTHER PTHR11444 1 477 0.0 T 22-04-2016 IPR000362 Fumarate lyase family YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 Gene3D G3DSA:1.10.275.10 4 142 3.0E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.9E-5 T 22-04-2016 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 3.9E-5 T 22-04-2016 YPTB_RS02315 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.9E-5 T 22-04-2016 YPTB_RS10595 c69ab5cd9c4586907ae161c27f5c8ed4 409 PANTHER PTHR23508:SF18 1 409 1.5E-220 T 22-04-2016 YPTB_RS10595 c69ab5cd9c4586907ae161c27f5c8ed4 409 Pfam PF07690 Major Facilitator Superfamily 23 306 1.3E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS10595 c69ab5cd9c4586907ae161c27f5c8ed4 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPTB_RS10595 c69ab5cd9c4586907ae161c27f5c8ed4 409 Gene3D G3DSA:1.20.1250.20 12 196 9.3E-34 T 22-04-2016 YPTB_RS10595 c69ab5cd9c4586907ae161c27f5c8ed4 409 PANTHER PTHR23508 1 409 1.5E-220 T 22-04-2016 YPTB_RS10595 c69ab5cd9c4586907ae161c27f5c8ed4 409 Gene3D G3DSA:1.20.1250.20 223 407 5.2E-24 T 22-04-2016 YPTB_RS10595 c69ab5cd9c4586907ae161c27f5c8ed4 409 SUPERFAMILY SSF103473 11 409 6.28E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS09900 ba56a54f41328b2414925a6c37f550ec 291 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 20 201 3.9E-51 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 YPTB_RS09900 ba56a54f41328b2414925a6c37f550ec 291 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 21 205 1.2E-54 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 YPTB_RS08120 8cfdc9bd6460182c5a2831123dd66e59 174 Gene3D G3DSA:3.10.129.10 20 168 4.5E-29 T 22-04-2016 IPR029069 HotDog domain YPTB_RS08120 8cfdc9bd6460182c5a2831123dd66e59 174 PANTHER PTHR30272 22 164 4.7E-42 T 22-04-2016 YPTB_RS08120 8cfdc9bd6460182c5a2831123dd66e59 174 SUPERFAMILY SSF54637 32 170 3.55E-27 T 22-04-2016 IPR029069 HotDog domain YPTB_RS08120 8cfdc9bd6460182c5a2831123dd66e59 174 Pfam PF07977 FabA-like domain 36 165 2.2E-15 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPTB_RS04925 ccaa803e6c34c33892785cffb34455b7 246 Pfam PF03734 L,D-transpeptidase catalytic domain 43 158 2.9E-8 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YPTB_RS04925 ccaa803e6c34c33892785cffb34455b7 246 SUPERFAMILY SSF141523 40 158 9.68E-10 T 22-04-2016 YPTB_RS04925 ccaa803e6c34c33892785cffb34455b7 246 PANTHER PTHR36699 1 246 4.4E-76 T 22-04-2016 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 PIRSF PIRSF004669 2 90 1.5E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 PANTHER PTHR34040:SF2 2 90 7.1E-38 T 22-04-2016 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 Pfam PF01313 Bacterial export proteins, family 3 9 78 2.7E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 6.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 6.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 6.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 2 88 8.5E-27 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 YPTB_RS18130 24d11d2a3cd4eba09ca0b831493b8da9 90 PANTHER PTHR34040 2 90 7.1E-38 T 22-04-2016 YPTB_RS12775 e18ac6f85173ca1f415cb8f2c532f701 227 PANTHER PTHR33508 4 225 3.4E-142 T 22-04-2016 YPTB_RS12775 e18ac6f85173ca1f415cb8f2c532f701 227 Pfam PF01914 MarC family integral membrane protein 9 218 2.1E-62 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPTB_RS12775 e18ac6f85173ca1f415cb8f2c532f701 227 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 15 215 6.0E-37 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPTB_RS12775 e18ac6f85173ca1f415cb8f2c532f701 227 PANTHER PTHR33508:SF2 4 225 3.4E-142 T 22-04-2016 YPTB_RS17595 505af06e2989ccf5319b56524e6b2783 228 PANTHER PTHR38033:SF1 1 228 2.5E-98 T 22-04-2016 YPTB_RS17595 505af06e2989ccf5319b56524e6b2783 228 PANTHER PTHR38033 1 228 2.5E-98 T 22-04-2016 YPTB_RS17595 505af06e2989ccf5319b56524e6b2783 228 Pfam PF09850 Type VI secretion system protein DotU 16 215 6.6E-46 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS17595 505af06e2989ccf5319b56524e6b2783 228 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 17 218 1.3E-47 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 PANTHER PTHR11019 17 273 7.2E-141 T 22-04-2016 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 PANTHER PTHR11019:SF119 17 273 7.2E-141 T 22-04-2016 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 Pfam PF12833 Helix-turn-helix domain 190 265 3.2E-11 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 Gene3D G3DSA:2.60.120.280 34 155 2.8E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 SMART SM00342 183 265 2.9E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 SUPERFAMILY SSF51215 34 154 8.5E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 Gene3D G3DSA:1.10.10.60 218 270 4.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS09400 3cd362ebff1f96e508661f277bf2906c 291 SUPERFAMILY SSF46689 218 270 7.62E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS13180 f7e90058be883353b65b70e487866df8 127 PANTHER PTHR33204:SF7 8 124 3.6E-71 T 22-04-2016 YPTB_RS13180 f7e90058be883353b65b70e487866df8 127 Gene3D G3DSA:1.10.10.10 7 125 4.9E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13180 f7e90058be883353b65b70e487866df8 127 SUPERFAMILY SSF46785 15 120 7.8E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13180 f7e90058be883353b65b70e487866df8 127 Pfam PF01638 HxlR-like helix-turn-helix 30 117 3.1E-28 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type YPTB_RS13180 f7e90058be883353b65b70e487866df8 127 PANTHER PTHR33204 8 124 3.6E-71 T 22-04-2016 YPTB_RS02840 cd58d170cc67720d4d53617e03638c2b 167 Pfam PF00583 Acetyltransferase (GNAT) family 49 122 1.4E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS02840 cd58d170cc67720d4d53617e03638c2b 167 PANTHER PTHR23091:SF237 3 166 4.0E-22 T 22-04-2016 YPTB_RS02840 cd58d170cc67720d4d53617e03638c2b 167 Gene3D G3DSA:3.40.630.30 14 128 2.2E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS02840 cd58d170cc67720d4d53617e03638c2b 167 PANTHER PTHR23091 3 166 4.0E-22 T 22-04-2016 YPTB_RS02840 cd58d170cc67720d4d53617e03638c2b 167 SUPERFAMILY SSF55729 3 152 3.54E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS06790 a7c74f8683c488633d6fb53a5a98acf5 293 PANTHER PTHR30043:SF5 1 289 8.5E-206 T 22-04-2016 YPTB_RS06790 a7c74f8683c488633d6fb53a5a98acf5 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 281 1.4E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06790 a7c74f8683c488633d6fb53a5a98acf5 293 PANTHER PTHR30043 1 289 8.5E-206 T 22-04-2016 YPTB_RS06790 a7c74f8683c488633d6fb53a5a98acf5 293 SUPERFAMILY SSF161098 84 274 7.68E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06790 a7c74f8683c488633d6fb53a5a98acf5 293 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 31 282 2.5E-77 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YPTB_RS06790 a7c74f8683c488633d6fb53a5a98acf5 293 Gene3D G3DSA:1.10.3720.10 84 282 2.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 SUPERFAMILY SSF55729 1 343 1.7E-132 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 341 6.5E-144 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 Gene3D G3DSA:2.40.40.20 285 343 3.8E-18 T 22-04-2016 YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 4 343 3.9E-156 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 4 343 2.5E-146 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 PANTHER PTHR30420 1 350 1.6E-227 T 22-04-2016 YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 350 71.037 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 Gene3D G3DSA:3.40.630.30 1 78 2.1E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 Gene3D G3DSA:3.40.630.30 113 135 2.1E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10755 0d64877edf0f3b3607e23c9416d32d47 350 PANTHER PTHR30420:SF1 1 350 1.6E-227 T 22-04-2016 YPTB_RS06695 a22336114a163b616f491b73ccce9168 108 Pfam PF07110 EthD domain 18 95 1.8E-15 T 22-04-2016 IPR009799 EthD domain YPTB_RS06695 a22336114a163b616f491b73ccce9168 108 SUPERFAMILY SSF54909 7 104 1.84E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS06695 a22336114a163b616f491b73ccce9168 108 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 7 107 5.8E-33 T 22-04-2016 IPR009799 EthD domain YPTB_RS06695 a22336114a163b616f491b73ccce9168 108 Gene3D G3DSA:3.30.70.900 12 105 6.9E-28 T 22-04-2016 YPTB_RS03490 18c85dbcdeb1ae887373400e09cd8827 317 Pfam PF02401 LytB protein 3 283 1.4E-91 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YPTB_RS03490 18c85dbcdeb1ae887373400e09cd8827 317 PANTHER PTHR30426 1 317 2.8E-160 T 22-04-2016 YPTB_RS03490 18c85dbcdeb1ae887373400e09cd8827 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 6.4E-97 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YPTB_RS03490 18c85dbcdeb1ae887373400e09cd8827 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.348 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 PANTHER PTHR30193:SF8 11 78 6.9E-169 T 22-04-2016 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 PANTHER PTHR30193:SF8 181 418 6.9E-169 T 22-04-2016 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 Gene3D G3DSA:1.10.3720.10 34 94 4.3E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 Gene3D G3DSA:1.10.3720.10 191 409 4.3E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 221 409 2.3E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 PANTHER PTHR30193 11 78 6.9E-169 T 22-04-2016 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 PANTHER PTHR30193 181 418 6.9E-169 T 22-04-2016 YPTB_RS15200 4f911a378cb606b799e97448f4c36c8d 421 SUPERFAMILY SSF161098 195 412 4.97E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 Gene3D G3DSA:2.40.50.100 240 282 5.9E-8 T 22-04-2016 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 Gene3D G3DSA:2.40.50.100 341 355 5.9E-8 T 22-04-2016 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 SUPERFAMILY SSF50331 237 355 4.62E-26 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 Pfam PF08402 TOBE domain 278 347 6.2E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 PANTHER PTHR24220:SF151 5 292 3.3E-170 T 22-04-2016 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 SMART SM00382 29 212 3.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 Gene3D G3DSA:3.40.50.300 3 235 1.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 PANTHER PTHR24220 5 292 3.3E-170 T 22-04-2016 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 Pfam PF00005 ABC transporter 21 162 1.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 Gene3D G3DSA:2.40.50.140 283 339 2.8E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS01420 dbda8da001dde3cc7832626d1efc57c4 357 SUPERFAMILY SSF52540 4 243 1.57E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 SUPERFAMILY SSF52540 254 494 7.17E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 Pfam PF00005 ABC transporter 280 434 5.4E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 Pfam PF00005 ABC transporter 29 178 3.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 SMART SM00382 288 483 2.1 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 SMART SM00382 38 233 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 SUPERFAMILY SSF52540 12 236 5.52E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 Gene3D G3DSA:3.40.50.300 11 240 5.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 Gene3D G3DSA:3.40.50.300 262 498 9.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 PANTHER PTHR24220:SF303 15 388 1.9E-296 T 22-04-2016 YPTB_RS08385 93278ac40bb8894185f84ed4e38864c6 506 PANTHER PTHR24220 15 388 1.9E-296 T 22-04-2016 YPTB_RS02070 f9ca76374e7fdf73b4196af1f549148e 151 Pfam PF05099 Tellurite resistance protein TerB 15 150 3.4E-24 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal YPTB_RS02070 f9ca76374e7fdf73b4196af1f549148e 151 SUPERFAMILY SSF158682 23 150 8.5E-17 T 22-04-2016 IPR029024 TerB-like YPTB_RS02070 f9ca76374e7fdf73b4196af1f549148e 151 Gene3D G3DSA:1.10.3680.10 21 150 5.6E-19 T 22-04-2016 IPR029024 TerB-like YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 Gene3D G3DSA:1.10.10.10 132 235 1.7E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 PANTHER PTHR26402:SF292 5 235 4.1E-115 T 22-04-2016 YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 SMART SM00448 5 116 1.2E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 SUPERFAMILY SSF52172 3 126 1.17E-41 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 Gene3D G3DSA:3.40.50.2300 4 127 1.7E-42 T 22-04-2016 YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 SUPERFAMILY SSF46894 132 234 2.3E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 PANTHER PTHR26402 5 235 4.1E-115 T 22-04-2016 YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 SMART SM00862 156 232 1.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS20350 1aca0782781533b1021503070b6aedf5 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 Pfam PF00155 Aminotransferase class I and II 55 394 2.6E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 PANTHER PTHR11751 19 396 4.8E-95 T 22-04-2016 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 Gene3D G3DSA:3.90.1150.10 255 397 9.0E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 Gene3D G3DSA:3.40.640.10 56 254 4.4E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 240 264 9.6E-11 T 22-04-2016 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 174 198 9.6E-11 T 22-04-2016 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YPTB_RS18575 442894de4ecf0722638827a5ba1ae12e 410 SUPERFAMILY SSF53383 50 398 7.89E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS15435 3f1acae0c03d6c2c75336c06528ff002 66 PANTHER PTHR37532 1 66 2.5E-36 T 22-04-2016 YPTB_RS15435 3f1acae0c03d6c2c75336c06528ff002 66 Gene3D G3DSA:1.10.10.600 1 66 8.3E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPTB_RS15435 3f1acae0c03d6c2c75336c06528ff002 66 PANTHER PTHR37532:SF1 1 66 2.5E-36 T 22-04-2016 YPTB_RS15435 3f1acae0c03d6c2c75336c06528ff002 66 SUPERFAMILY SSF140319 3 64 4.84E-27 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPTB_RS15435 3f1acae0c03d6c2c75336c06528ff002 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 2.9E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPTB_RS15435 3f1acae0c03d6c2c75336c06528ff002 66 PIRSF PIRSF039003 3 66 9.8E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPTB_RS15435 3f1acae0c03d6c2c75336c06528ff002 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.0E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 Gene3D G3DSA:3.20.10.10 134 294 1.2E-56 T 22-04-2016 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 PANTHER PTHR11825 1 305 4.1E-134 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 SUPERFAMILY SSF56752 6 306 2.09E-105 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 Pfam PF01063 Amino-transferase class IV 35 267 1.3E-48 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 4.5E-144 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 Gene3D G3DSA:3.30.470.10 6 129 2.0E-44 T 22-04-2016 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 PANTHER PTHR11825:SF7 1 305 4.1E-134 T 22-04-2016 YPTB_RS00840 29517221d8a9ea65eea864c3670fab01 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 SUPERFAMILY SSF52540 307 549 2.87E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 Pfam PF00005 ABC transporter 330 479 3.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 Pfam PF00664 ABC transporter transmembrane region 39 248 6.4E-21 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 Gene3D G3DSA:3.40.50.300 311 543 1.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 SUPERFAMILY SSF90123 2 301 1.44E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 PANTHER PTHR24222 1 566 0.0 T 22-04-2016 YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 Gene3D G3DSA:1.20.1560.10 2 296 6.9E-31 T 22-04-2016 YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 SMART SM00382 339 533 6.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08795 f9a3071129c327ad3c4724c1d50d6cbf 570 PANTHER PTHR24222:SF24 1 566 0.0 T 22-04-2016 YPTB_RS16660 b5e75c73ffe2f03c2f38a9536e5d84ba 165 PANTHER PTHR33799 1 165 4.7E-110 T 22-04-2016 YPTB_RS16660 b5e75c73ffe2f03c2f38a9536e5d84ba 165 SUPERFAMILY SSF52728 5 162 8.63E-47 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPTB_RS16660 b5e75c73ffe2f03c2f38a9536e5d84ba 165 Pfam PF03830 PTS system sorbose subfamily IIB component 6 154 1.7E-47 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPTB_RS16660 b5e75c73ffe2f03c2f38a9536e5d84ba 165 Gene3D G3DSA:3.40.35.10 5 162 4.8E-53 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPTB_RS16660 b5e75c73ffe2f03c2f38a9536e5d84ba 165 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 153 4.7E-51 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YPTB_RS16660 b5e75c73ffe2f03c2f38a9536e5d84ba 165 PANTHER PTHR33799:SF6 1 165 4.7E-110 T 22-04-2016 YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 Gene3D G3DSA:3.90.180.10 1 85 1.1E-7 T 22-04-2016 IPR011032 GroES-like YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 SUPERFAMILY SSF51735 116 288 3.88E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.1E-4 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 Gene3D G3DSA:3.40.50.720 125 290 1.3E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 SMART SM00829 11 313 7.6E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 Pfam PF00107 Zinc-binding dehydrogenase 158 269 8.4E-16 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 2.0E-136 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 PANTHER PTHR11695 15 325 3.5E-180 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 PANTHER PTHR11695:SF13 15 325 3.5E-180 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI YPTB_RS19290 ed7a5dba56b414206db0c244e7e24e32 325 SUPERFAMILY SSF50129 1 145 2.2E-46 T 22-04-2016 IPR011032 GroES-like YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 2.4E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 69.865 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 5.0E-145 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 SUPERFAMILY SSF53901 4 316 1.55E-69 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 5.9E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 PANTHER PTHR18919 26 316 1.1E-127 T 22-04-2016 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 Gene3D G3DSA:3.40.47.10 1 160 6.8E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 PANTHER PTHR18919:SF109 26 316 1.1E-127 T 22-04-2016 YPTB_RS13440 27fdad0d7df19c4cb19e0bbdc93faced 316 Gene3D G3DSA:3.40.47.10 161 315 9.0E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS17010 32c0a054248d20fbe2a68ed3f16403e7 601 Pfam PF03237 Terminase-like family 167 582 2.3E-82 T 22-04-2016 IPR004921 Terminase, large subunit YPTB_RS17010 32c0a054248d20fbe2a68ed3f16403e7 601 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 7 61 8.7E-14 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 YPTB_RS17010 32c0a054248d20fbe2a68ed3f16403e7 601 SUPERFAMILY SSF46689 2 84 3.29E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS17010 32c0a054248d20fbe2a68ed3f16403e7 601 Gene3D G3DSA:1.10.10.60 3 39 3.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11760 00059b692391c88b038ef2187826dad2 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 4.3E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS11760 00059b692391c88b038ef2187826dad2 231 PANTHER PTHR22789:SF7 1 231 3.5E-153 T 22-04-2016 YPTB_RS11760 00059b692391c88b038ef2187826dad2 231 Gene3D G3DSA:3.40.225.10 2 231 3.1E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS11760 00059b692391c88b038ef2187826dad2 231 PANTHER PTHR22789 1 231 3.5E-153 T 22-04-2016 YPTB_RS11760 00059b692391c88b038ef2187826dad2 231 SMART SM01007 7 198 8.8E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS11760 00059b692391c88b038ef2187826dad2 231 SUPERFAMILY SSF53639 1 223 3.34E-67 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS11760 00059b692391c88b038ef2187826dad2 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 1.9E-125 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 3.9E-45 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 PANTHER PTHR31223 83 342 4.8E-199 T 22-04-2016 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 PANTHER PTHR31223 359 384 4.8E-199 T 22-04-2016 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 Pfam PF03641 Possible lysine decarboxylase 190 329 7.9E-33 T 22-04-2016 IPR031100 LOG family YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 PANTHER PTHR31223:SF12 359 384 4.8E-199 T 22-04-2016 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 Gene3D G3DSA:3.40.50.450 125 452 8.9E-126 T 22-04-2016 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 4.9E-58 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 Gene3D G3DSA:3.30.1850.10 2 112 1.3E-52 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 PANTHER PTHR31223:SF12 83 342 4.8E-199 T 22-04-2016 YPTB_RS16310 9eb933e4d6194c3c9891ab106f3e1438 454 SUPERFAMILY SSF102405 122 330 6.41E-42 T 22-04-2016 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 PANTHER PTHR32071:SF5 306 593 7.4E-114 T 22-04-2016 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 Gene3D G3DSA:3.40.50.300 315 475 4.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 Gene3D G3DSA:1.10.10.60 556 593 6.5E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 SUPERFAMILY SSF52540 318 536 2.95E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 Pfam PF00158 Sigma-54 interaction domain 314 469 3.1E-58 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 Pfam PF02954 Bacterial regulatory protein, Fis family 561 593 2.8E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 SUPERFAMILY SSF46689 513 594 5.68E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 PANTHER PTHR32071 306 593 7.4E-114 T 22-04-2016 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 Gene3D G3DSA:1.10.8.60 496 548 9.6E-12 T 22-04-2016 YPTB_RS11985 3c3520a836f7170c36cd2e0dfa1d59ba 600 SMART SM00382 322 466 6.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 3.3E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 SUPERFAMILY SSF56784 6 216 2.49E-50 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 1.3E-25 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 Gene3D G3DSA:3.40.50.1000 95 216 5.1E-39 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 Gene3D G3DSA:3.40.50.1000 3 20 5.1E-39 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 Gene3D G3DSA:1.10.150.240 21 91 3.2E-33 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 PANTHER PTHR18901:SF34 1 217 3.5E-74 T 22-04-2016 YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS12820 643bf0a6c7a29494749fb01ddde590d1 221 PANTHER PTHR18901 1 217 3.5E-74 T 22-04-2016 YPTB_RS07665 f7ce7ff0a084511abc7051a4400a7ad2 298 PANTHER PTHR35804 2 298 1.2E-100 T 22-04-2016 YPTB_RS07665 f7ce7ff0a084511abc7051a4400a7ad2 298 PANTHER PTHR35804:SF1 2 298 1.2E-100 T 22-04-2016 YPTB_RS07665 f7ce7ff0a084511abc7051a4400a7ad2 298 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 137 296 8.0E-68 T 22-04-2016 IPR005642 Lysine exporter LysO YPTB_RS07665 f7ce7ff0a084511abc7051a4400a7ad2 298 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 2.5E-56 T 22-04-2016 IPR005642 Lysine exporter LysO YPTB_RS10155 337f5f70390e0d0cc0263bbf0124f57e 117 Gene3D G3DSA:3.10.450.40 11 115 6.8E-36 T 22-04-2016 YPTB_RS10155 337f5f70390e0d0cc0263bbf0124f57e 117 Pfam PF04965 Gene 25-like lysozyme 20 96 1.1E-15 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPTB_RS10155 337f5f70390e0d0cc0263bbf0124f57e 117 SUPERFAMILY SSF160719 16 114 1.83E-29 T 22-04-2016 YPTB_RS10155 337f5f70390e0d0cc0263bbf0124f57e 117 PANTHER PTHR35862 3 114 6.9E-36 T 22-04-2016 YPTB_RS10155 337f5f70390e0d0cc0263bbf0124f57e 117 PANTHER PTHR35862:SF2 3 114 6.9E-36 T 22-04-2016 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 PIRSF PIRSF005900 8 167 3.6E-41 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 44.955 T 22-04-2016 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 Pfam PF00210 Ferritin-like domain 30 166 3.0E-21 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 SUPERFAMILY SSF47240 10 167 1.13E-46 T 22-04-2016 IPR009078 Ferritin-like superfamily YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.4E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.4E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.4E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 PANTHER PTHR30295:SF4 9 167 1.6E-99 T 22-04-2016 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 PANTHER PTHR30295 9 167 1.6E-99 T 22-04-2016 YPTB_RS13820 7ee279ec2c2abccee0c5121e9c47037a 167 Gene3D G3DSA:1.20.1260.10 2 167 1.5E-50 T 22-04-2016 IPR012347 Ferritin-related YPTB_RS14130 1e5579ad7995fdb2eeadcfd4608b2697 230 Gene3D G3DSA:3.20.20.450 13 225 1.9E-16 T 22-04-2016 IPR001633 EAL domain YPTB_RS14130 1e5579ad7995fdb2eeadcfd4608b2697 230 Pfam PF00563 EAL domain 13 218 1.1E-13 T 22-04-2016 IPR001633 EAL domain YPTB_RS14130 1e5579ad7995fdb2eeadcfd4608b2697 230 SMART SM00052 1 223 9.1E-6 T 22-04-2016 IPR001633 EAL domain YPTB_RS14130 1e5579ad7995fdb2eeadcfd4608b2697 230 PANTHER PTHR33121 8 218 6.4E-102 T 22-04-2016 YPTB_RS14130 1e5579ad7995fdb2eeadcfd4608b2697 230 SUPERFAMILY SSF141868 12 226 5.1E-21 T 22-04-2016 IPR001633 EAL domain YPTB_RS14130 1e5579ad7995fdb2eeadcfd4608b2697 230 PANTHER PTHR33121:SF6 8 218 6.4E-102 T 22-04-2016 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 3.2E-100 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 1.9E-165 T 22-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 PANTHER PTHR30304 1 283 1.7E-174 T 22-04-2016 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 PIRSF PIRSF001359 1 284 3.8E-109 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 Gene3D G3DSA:3.20.20.70 1 283 4.0E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.5E-101 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 PANTHER PTHR30304:SF5 1 283 1.7E-174 T 22-04-2016 YPTB_RS16710 4178ea8b48f9d3c8d1296452e5ecc11c 284 SUPERFAMILY SSF51569 3 283 2.05E-101 T 22-04-2016 YPTB_RS07215 5ff73e7ef8e09e76b705e32d437ea78b 399 PANTHER PTHR23502 11 392 4.6E-219 T 22-04-2016 YPTB_RS07215 5ff73e7ef8e09e76b705e32d437ea78b 399 Pfam PF07690 Major Facilitator Superfamily 16 358 1.7E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS07215 5ff73e7ef8e09e76b705e32d437ea78b 399 SUPERFAMILY SSF103473 5 394 1.15E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS07215 5ff73e7ef8e09e76b705e32d437ea78b 399 Gene3D G3DSA:1.20.1250.20 12 195 9.3E-35 T 22-04-2016 YPTB_RS07215 5ff73e7ef8e09e76b705e32d437ea78b 399 Gene3D G3DSA:1.20.1250.20 201 392 1.2E-10 T 22-04-2016 YPTB_RS07215 5ff73e7ef8e09e76b705e32d437ea78b 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 390 1.6E-139 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YPTB_RS07215 5ff73e7ef8e09e76b705e32d437ea78b 399 PANTHER PTHR23502:SF39 11 392 4.6E-219 T 22-04-2016 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 SUPERFAMILY SSF46689 182 232 5.55E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 Gene3D G3DSA:1.10.10.60 236 285 1.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 Gene3D G3DSA:2.60.120.280 13 173 2.1E-39 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 PANTHER PTHR11019 1 290 1.4E-150 T 22-04-2016 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 Pfam PF12833 Helix-turn-helix domain 205 284 7.2E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 PANTHER PTHR11019:SF123 1 290 1.4E-150 T 22-04-2016 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 SUPERFAMILY SSF46689 236 286 1.57E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 Gene3D G3DSA:1.10.10.60 178 235 2.4E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 SUPERFAMILY SSF51215 12 171 1.83E-29 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 Pfam PF02311 AraC-like ligand binding domain 27 162 8.5E-23 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 5.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 5.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS11885 67ad2824f02580eab3c9f8300cf5488b 310 SMART SM00342 199 282 5.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS05650 4a71d9f513d09238ebd59cd46707c02e 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 146 4.4E-24 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain YPTB_RS05650 4a71d9f513d09238ebd59cd46707c02e 149 Gene3D G3DSA:2.40.50.140 91 146 1.7E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS05650 4a71d9f513d09238ebd59cd46707c02e 149 PANTHER PTHR33507:SF3 1 149 2.3E-61 T 22-04-2016 YPTB_RS05650 4a71d9f513d09238ebd59cd46707c02e 149 SUPERFAMILY SSF141322 90 147 2.88E-5 T 22-04-2016 YPTB_RS05650 4a71d9f513d09238ebd59cd46707c02e 149 PANTHER PTHR33507 1 149 2.3E-61 T 22-04-2016 YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 71.371 T 22-04-2016 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87|UniPathway: UPA00030|UniPathway: UPA00032 YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 Gene3D G3DSA:3.90.1150.10 253 379 2.3E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 Gene3D G3DSA:3.40.640.10 4 251 5.4E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 PIRSF PIRSF000390 1 381 2.1E-111 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 PANTHER PTHR30244:SF3 1 380 1.9E-177 T 22-04-2016 YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 4.3E-128 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 PANTHER PTHR30244 1 380 1.9E-177 T 22-04-2016 YPTB_RS12700 7e77339e8dfe124ab28bc3dc3556627e 384 SUPERFAMILY SSF53383 4 376 1.8E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS14750 cedb589de3768756bf0178781466de47 401 PANTHER PTHR30572:SF3 1 369 3.5E-161 T 22-04-2016 YPTB_RS14750 cedb589de3768756bf0178781466de47 401 SUPERFAMILY SSF111369 54 265 1.11E-20 T 22-04-2016 YPTB_RS14750 cedb589de3768756bf0178781466de47 401 Gene3D G3DSA:2.40.50.100 63 96 2.1E-17 T 22-04-2016 YPTB_RS14750 cedb589de3768756bf0178781466de47 401 Gene3D G3DSA:2.40.50.100 185 217 2.1E-17 T 22-04-2016 YPTB_RS14750 cedb589de3768756bf0178781466de47 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 269 3.7E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS14750 cedb589de3768756bf0178781466de47 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 381 1.5E-48 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS14750 cedb589de3768756bf0178781466de47 401 PANTHER PTHR30572 1 369 3.5E-161 T 22-04-2016 YPTB_RS07190 4af70e20e70c4af3a6a512a5208cafaf 75 Gene3D G3DSA:1.10.3390.10 1 75 6.9E-38 T 22-04-2016 IPR023202 YejL-like domain YPTB_RS07190 4af70e20e70c4af3a6a512a5208cafaf 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.8E-24 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPTB_RS07190 4af70e20e70c4af3a6a512a5208cafaf 75 PIRSF PIRSF006188 1 72 3.0E-35 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPTB_RS07190 4af70e20e70c4af3a6a512a5208cafaf 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-27 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPTB_RS07190 4af70e20e70c4af3a6a512a5208cafaf 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.627 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPTB_RS07190 4af70e20e70c4af3a6a512a5208cafaf 75 SUPERFAMILY SSF158651 1 75 2.09E-31 T 22-04-2016 YPTB_RS03420 c88625a97d1e646e4330a22694f8c042 195 Gene3D G3DSA:3.40.980.10 3 186 5.7E-53 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS03420 c88625a97d1e646e4330a22694f8c042 195 SMART SM00852 7 153 8.1E-22 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS03420 c88625a97d1e646e4330a22694f8c042 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 4.1E-40 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS03420 c88625a97d1e646e4330a22694f8c042 195 SUPERFAMILY SSF53218 3 187 3.4E-48 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS03420 c88625a97d1e646e4330a22694f8c042 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 3.5E-28 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS03420 c88625a97d1e646e4330a22694f8c042 195 PANTHER PTHR10192 1 193 1.5E-91 T 22-04-2016 YPTB_RS03420 c88625a97d1e646e4330a22694f8c042 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 SMART SM00345 18 77 9.3E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 SMART SM00895 106 227 5.0E-17 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751 104 122 9.7E-52 T 22-04-2016 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751 18 84 9.7E-52 T 22-04-2016 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 SUPERFAMILY SSF48008 107 223 6.28E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 Pfam PF07729 FCD domain 110 222 9.4E-22 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 4.0E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 SUPERFAMILY SSF46785 10 81 1.25E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 Gene3D G3DSA:1.10.10.10 4 78 5.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751:SF408 104 122 9.7E-52 T 22-04-2016 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751:SF408 18 84 9.7E-52 T 22-04-2016 YPTB_RS00125 477c35b97dc77d15cc30cfd369500f69 229 Gene3D G3DSA:1.20.120.530 106 220 1.1E-18 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Gene3D G3DSA:3.40.50.970 26 201 9.8E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Gene3D G3DSA:3.40.50.970 242 334 9.8E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 1.0E-39 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.5E-117 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 SUPERFAMILY SSF52518 316 503 2.02E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 SUPERFAMILY SSF52518 243 381 3.93E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 SUPERFAMILY SSF52518 9 199 3.93E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 619 46.254 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Gene3D G3DSA:3.40.50.970 335 494 1.3E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 PANTHER PTHR11624:SF20 241 618 0.0 T 22-04-2016 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Pfam PF02780 Transketolase, C-terminal domain 494 610 6.3E-26 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 SMART SM00861 319 483 2.7E-68 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 PANTHER PTHR11624 241 618 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 Gene3D G3DSA:3.40.50.920 495 618 3.0E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 SUPERFAMILY SSF52922 490 618 3.8E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS05215 3b10ca5b9e092abc83006805e8d271f0 619 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 PANTHER PTHR23264 9 368 9.0E-195 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 SUPERFAMILY SSF117916 14 85 8.83E-5 T 22-04-2016 YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 Gene3D G3DSA:3.40.50.300 95 350 7.4E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 SUPERFAMILY SSF52540 109 356 3.35E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.658 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 2.7E-99 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 YPTB_RS08445 c6b3b6a9c828649bcdc889729b416134 370 PANTHER PTHR23264:SF19 9 368 9.0E-195 T 22-04-2016 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 4 342 2.1E-117 T 22-04-2016 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 PANTHER PTHR30531 1 355 5.3E-274 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 9.7E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 9.7E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 9.7E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 9.7E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 9.7E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 SUPERFAMILY SSF160544 238 344 1.06E-31 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 Gene3D G3DSA:3.40.1690.10 211 346 2.3E-50 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 PANTHER PTHR30531:SF6 1 355 5.3E-274 T 22-04-2016 YPTB_RS01950 14791a71ed656c3d7ccd04ccede18ad5 355 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 340 4.5E-104 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.230.10 491 607 2.5E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54211 486 608 7.84E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 2.4E-67 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 SMART SM00838 609 696 2.3E-58 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115:SF66 310 700 0.0 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54980 409 487 1.73E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115 310 700 0.0 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.40.50.300 6 293 5.8E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.70.870 413 487 4.7E-39 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 SMART SM00889 487 607 7.2E-76 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF52540 6 287 2.97E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF50447 271 411 1.63E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF14492 Elongation Factor G, domain II 411 485 7.7E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF03764 Elongation factor G, domain IV 486 607 1.3E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:2.40.30.10 312 412 1.1E-38 T 22-04-2016 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 111.69 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.8E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.70.240 608 694 1.2E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.6E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS20040 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54980 612 697 2.27E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS13340 a14b275df4ef49dca64394f4047a5b54 272 PANTHER PTHR21089:SF9 1 271 6.0E-193 T 22-04-2016 YPTB_RS13340 a14b275df4ef49dca64394f4047a5b54 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 4.1E-16 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS13340 a14b275df4ef49dca64394f4047a5b54 272 SUPERFAMILY SSF53223 7 105 1.32E-26 T 22-04-2016 YPTB_RS13340 a14b275df4ef49dca64394f4047a5b54 272 Gene3D G3DSA:3.40.50.720 111 267 1.7E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13340 a14b275df4ef49dca64394f4047a5b54 272 PANTHER PTHR21089 1 271 6.0E-193 T 22-04-2016 YPTB_RS13340 a14b275df4ef49dca64394f4047a5b54 272 Gene3D G3DSA:3.40.192.10 25 110 9.4E-28 T 22-04-2016 YPTB_RS13340 a14b275df4ef49dca64394f4047a5b54 272 SUPERFAMILY SSF51735 106 266 2.01E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 Pfam PF05175 Methyltransferase small domain 133 215 1.3E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 9.1E-100 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 PIRSF PIRSF037167 2 307 2.2E-147 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 Gene3D G3DSA:3.40.50.150 108 290 2.3E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 Gene3D G3DSA:1.10.8.10 15 106 1.2E-4 T 22-04-2016 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.1E-136 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 SUPERFAMILY SSF53335 15 294 3.5E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.115 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 PANTHER PTHR18895:SF66 4 299 1.7E-191 T 22-04-2016 YPTB_RS14275 05aa6410f6aa6072815a5ca6138aad49 310 PANTHER PTHR18895 4 299 1.7E-191 T 22-04-2016 YPTB_RS16280 7edbea33f9c68ba2364d8c0a9b24eee9 149 Gene3D G3DSA:3.40.50.360 1 148 1.3E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS16280 7edbea33f9c68ba2364d8c0a9b24eee9 149 Pfam PF00258 Flavodoxin 6 136 1.2E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPTB_RS16280 7edbea33f9c68ba2364d8c0a9b24eee9 149 PRINTS PR00369 Flavodoxin signature 84 94 5.3E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS16280 7edbea33f9c68ba2364d8c0a9b24eee9 149 PRINTS PR00369 Flavodoxin signature 53 64 5.3E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS16280 7edbea33f9c68ba2364d8c0a9b24eee9 149 PRINTS PR00369 Flavodoxin signature 108 127 5.3E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPTB_RS16280 7edbea33f9c68ba2364d8c0a9b24eee9 149 PANTHER PTHR19384 1 144 2.3E-27 T 22-04-2016 YPTB_RS16280 7edbea33f9c68ba2364d8c0a9b24eee9 149 SUPERFAMILY SSF52218 1 148 2.67E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 SUPERFAMILY SSF53474 3 253 1.91E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 PANTHER PTHR10992:SF768 1 254 1.8E-81 T 22-04-2016 YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 Pfam PF12697 Alpha/beta hydrolase family 19 246 9.5E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 PANTHER PTHR10992 1 254 1.8E-81 T 22-04-2016 YPTB_RS06240 04f185029ca5d06908ef2f89713145c4 255 Gene3D G3DSA:3.40.50.1820 10 253 1.6E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 Gene3D G3DSA:2.40.128.130 933 1254 7.7E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 PANTHER PTHR35037:SF1 1 1254 0.0 T 22-04-2016 YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 PANTHER PTHR35037 1 1254 0.0 T 22-04-2016 YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 SMART SM00869 975 1239 6.0E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 SUPERFAMILY SSF51126 401 920 8.16E-33 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 807 1254 4.1E-79 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 SUPERFAMILY SSF103515 937 1254 3.4E-39 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 Gene3D G3DSA:2.160.20.20 401 932 2.2E-21 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS17780 2d6da50ecc22df308ec459c160c3a68d 1254 Pfam PF03797 Autotransporter beta-domain 974 1236 5.9E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 Pfam PF08281 Sigma-70, region 4 129 180 7.3E-19 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 PANTHER PTHR30173 1 186 4.3E-55 T 22-04-2016 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 Gene3D G3DSA:1.10.10.10 122 187 6.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 PANTHER PTHR30173:SF1 1 186 4.3E-55 T 22-04-2016 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 1.1E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 SUPERFAMILY SSF88659 122 183 1.63E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 Gene3D G3DSA:1.10.1740.10 2 109 3.5E-36 T 22-04-2016 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 1.4E-99 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 SUPERFAMILY SSF88946 2 103 6.75E-30 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 Pfam PF04542 Sigma-70 region 2 25 91 1.2E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS15655 5f1094738f6cca4777a1a31598f0e882 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 9.3E-54 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 Gene3D G3DSA:3.40.50.1000 175 263 6.1E-48 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 Gene3D G3DSA:3.40.50.1000 1 72 6.1E-48 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 PANTHER PTHR10000:SF21 1 264 2.2E-198 T 22-04-2016 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 SUPERFAMILY SSF56784 1 262 1.95E-62 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 8.1E-55 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 Gene3D G3DSA:3.30.1240.10 83 174 1.1E-13 T 22-04-2016 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 66.06 T 22-04-2016 IPR023938 HMP-PP phosphatase GO:0016818 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 22-04-2016 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.8E-34 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPTB_RS05360 bb19217e363fcfbd14ccc4cab467aebb 273 PANTHER PTHR10000 1 264 2.2E-198 T 22-04-2016 YPTB_RS21070 a3f9655ccc7fb6a338c7cfc2d962106d 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 305 9.9E-83 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS21070 a3f9655ccc7fb6a338c7cfc2d962106d 320 Gene3D G3DSA:3.40.50.1100 71 313 9.1E-68 T 22-04-2016 YPTB_RS21070 a3f9655ccc7fb6a338c7cfc2d962106d 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YPTB_RS21070 a3f9655ccc7fb6a338c7cfc2d962106d 320 PANTHER PTHR10314:SF30 6 308 6.0E-117 T 22-04-2016 YPTB_RS21070 a3f9655ccc7fb6a338c7cfc2d962106d 320 SUPERFAMILY SSF53686 6 308 2.49E-91 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS21070 a3f9655ccc7fb6a338c7cfc2d962106d 320 PANTHER PTHR10314 6 308 6.0E-117 T 22-04-2016 YPTB_RS07070 7178482c58532e7e1acdea9bb910a469 122 Pfam PF10618 Phage tail tube protein 6 121 4.0E-42 T 22-04-2016 IPR019596 Bacteriophage Mu, GpM, tail tube YPTB_RS19740 475ca6ea0d4d3f58de0a53c50ada69a8 499 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 103 499 1.5E-128 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPTB_RS19740 475ca6ea0d4d3f58de0a53c50ada69a8 499 Gene3D G3DSA:3.10.20.310 16 94 5.7E-18 T 22-04-2016 YPTB_RS19740 475ca6ea0d4d3f58de0a53c50ada69a8 499 Gene3D G3DSA:2.40.160.50 123 499 2.1E-95 T 22-04-2016 YPTB_RS19740 475ca6ea0d4d3f58de0a53c50ada69a8 499 PANTHER PTHR34597 6 499 4.3E-219 T 22-04-2016 YPTB_RS19740 475ca6ea0d4d3f58de0a53c50ada69a8 499 PIRSF PIRSF029745 5 499 2.4E-123 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPTB_RS19740 475ca6ea0d4d3f58de0a53c50ada69a8 499 Pfam PF08479 POTRA domain, ShlB-type 21 94 1.1E-16 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB_RS19740 475ca6ea0d4d3f58de0a53c50ada69a8 499 PANTHER PTHR34597:SF2 6 499 4.3E-219 T 22-04-2016 YPTB_RS20395 ad401ba1a963b57f1984f4d6a7a1da9a 233 Gene3D G3DSA:3.40.50.2020 50 232 4.0E-25 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS20395 ad401ba1a963b57f1984f4d6a7a1da9a 233 PANTHER PTHR11907:SF9 1 233 3.3E-79 T 22-04-2016 YPTB_RS20395 ad401ba1a963b57f1984f4d6a7a1da9a 233 Pfam PF00156 Phosphoribosyl transferase domain 143 229 3.0E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPTB_RS20395 ad401ba1a963b57f1984f4d6a7a1da9a 233 PANTHER PTHR11907 1 233 3.3E-79 T 22-04-2016 YPTB_RS20395 ad401ba1a963b57f1984f4d6a7a1da9a 233 SUPERFAMILY SSF53271 46 231 1.31E-33 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS08235 ee109adc631cc09bd040aa04a84f3547 582 SMART SM00257 268 312 2.5E-9 T 22-04-2016 IPR018392 LysM domain YPTB_RS08235 ee109adc631cc09bd040aa04a84f3547 582 Pfam PF01476 LysM domain 269 311 3.4E-10 T 22-04-2016 IPR018392 LysM domain YPTB_RS08235 ee109adc631cc09bd040aa04a84f3547 582 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 407 539 4.2E-47 T 22-04-2016 IPR013423 Conserved hypothetical protein CHP02594 YPTB_RS08235 ee109adc631cc09bd040aa04a84f3547 582 SUPERFAMILY SSF54106 267 312 1.07E-9 T 22-04-2016 IPR018392 LysM domain YPTB_RS08235 ee109adc631cc09bd040aa04a84f3547 582 Gene3D G3DSA:3.10.350.10 266 313 1.4E-14 T 22-04-2016 IPR018392 LysM domain YPTB_RS08235 ee109adc631cc09bd040aa04a84f3547 582 Pfam PF05257 CHAP domain 440 517 5.2E-6 T 22-04-2016 IPR007921 CHAP domain YPTB_RS07395 1357e66646a8d61bec2c17d2d1dd6937 362 PANTHER PTHR30106:SF2 3 361 1.6E-158 T 22-04-2016 YPTB_RS07395 1357e66646a8d61bec2c17d2d1dd6937 362 Pfam PF03601 Conserved hypothetical protein 698 23 338 1.4E-107 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YPTB_RS07395 1357e66646a8d61bec2c17d2d1dd6937 362 PANTHER PTHR30106 3 361 1.6E-158 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YPTB_RS07395 1357e66646a8d61bec2c17d2d1dd6937 362 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 21 358 9.7E-127 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 YPTB_RS04275 1251447bf4ef911a32b51277abc58921 106 PANTHER PTHR37485:SF1 2 106 4.1E-55 T 22-04-2016 YPTB_RS04275 1251447bf4ef911a32b51277abc58921 106 PANTHER PTHR37485 2 106 4.1E-55 T 22-04-2016 YPTB_RS04275 1251447bf4ef911a32b51277abc58921 106 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.701 T 22-04-2016 IPR023081 Cell division protein FtsB YPTB_RS04275 1251447bf4ef911a32b51277abc58921 106 Pfam PF04977 Septum formation initiator 11 89 6.8E-30 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 52.305 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 PANTHER PTHR33221:SF1 2 152 5.1E-73 T 22-04-2016 YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.5E-67 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 Gene3D G3DSA:1.10.10.10 1 133 2.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 Pfam PF02082 Transcriptional regulator 1 83 2.3E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 SUPERFAMILY SSF46785 2 133 1.17E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.9E-47 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPTB_RS15470 bb3282ee938aeb2282dc15c03ef7e083 164 PANTHER PTHR33221 2 152 5.1E-73 T 22-04-2016 YPTB_RS12370 ee5be7860ce7f94902fdf87466b1308d 221 PANTHER PTHR31088:SF7 2 219 4.3E-131 T 22-04-2016 YPTB_RS12370 ee5be7860ce7f94902fdf87466b1308d 221 PANTHER PTHR31088 2 219 4.3E-131 T 22-04-2016 YPTB_RS12370 ee5be7860ce7f94902fdf87466b1308d 221 Pfam PF04012 PspA/IM30 family 2 216 8.6E-46 T 22-04-2016 IPR007157 PspA/IM30 YPTB_RS12370 ee5be7860ce7f94902fdf87466b1308d 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 2.0E-95 T 22-04-2016 IPR014319 Phage shock protein, PspA YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 SUPERFAMILY SSF53623 95 308 1.83E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 58.928 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 Gene3D G3DSA:3.90.190.20 314 450 7.6E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 3.3E-258 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 SUPERFAMILY SSF53244 312 449 9.03E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 Pfam PF01225 Mur ligase family, catalytic domain 2 98 1.6E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 Gene3D G3DSA:3.40.1190.10 92 313 7.5E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 6.8E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 SUPERFAMILY SSF51984 1 90 3.79E-23 T 22-04-2016 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 Pfam PF08245 Mur ligase middle domain 108 291 1.2E-18 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 Gene3D G3DSA:3.40.50.720 1 90 1.6E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 PANTHER PTHR23135 1 440 0.0 T 22-04-2016 YPTB_RS02620 4c66eefbd31be4654f1804e2a288390f 461 PANTHER PTHR23135:SF17 1 440 0.0 T 22-04-2016 YPTB_RS18010 7eb46e75e5bf8416053b432a1f6b2d65 307 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 7.7E-7 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS18010 7eb46e75e5bf8416053b432a1f6b2d65 307 PANTHER PTHR30244:SF5 1 307 2.8E-75 T 22-04-2016 YPTB_RS18010 7eb46e75e5bf8416053b432a1f6b2d65 307 SUPERFAMILY SSF64518 1 307 1.24E-44 T 22-04-2016 YPTB_RS18010 7eb46e75e5bf8416053b432a1f6b2d65 307 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 177 5.6E-38 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 YPTB_RS18010 7eb46e75e5bf8416053b432a1f6b2d65 307 PANTHER PTHR30244 1 307 2.8E-75 T 22-04-2016 YPTB_RS18010 7eb46e75e5bf8416053b432a1f6b2d65 307 Gene3D G3DSA:1.20.1330.10 212 259 4.8E-8 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS18010 7eb46e75e5bf8416053b432a1f6b2d65 307 Gene3D G3DSA:1.20.1330.10 58 168 4.8E-8 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF82861 28 112 2.22E-16 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF82689 181 279 9.55E-29 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 Pfam PF00924 Mechanosensitive ion channel 72 268 2.0E-53 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 Gene3D G3DSA:2.30.30.60 129 178 5.8E-19 T 22-04-2016 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 Pfam PF05552 Conserved TM helix 15 64 5.2E-14 T 22-04-2016 IPR008910 Conserved TM helix YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 PANTHER PTHR30221:SF7 1 289 1.1E-117 T 22-04-2016 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 PANTHER PTHR30221 1 289 1.1E-117 T 22-04-2016 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF50182 114 179 7.52E-17 T 22-04-2016 IPR010920 LSM domain YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YPTB_RS17300 7705f87e858e6fd6719440b4949e429f 289 Gene3D G3DSA:3.30.70.100 182 266 4.2E-25 T 22-04-2016 YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 Pfam PF04851 Type III restriction enzyme, res subunit 263 456 2.8E-28 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 SUPERFAMILY SSF52540 210 458 9.44E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 764 3.4E-98 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 PANTHER PTHR30195 567 732 6.0E-84 T 22-04-2016 YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 PANTHER PTHR30195 26 537 6.0E-84 T 22-04-2016 YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 SUPERFAMILY SSF52540 667 770 1.77E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 SUPERFAMILY SSF52540 300 351 1.77E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 206 1.0E-18 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 SMART SM00487 260 481 4.2E-6 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 Gene3D G3DSA:3.40.50.300 263 466 1.5E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 771 1057 1.6E-35 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 PANTHER PTHR30195:SF16 567 732 6.0E-84 T 22-04-2016 YPTB_RS03040 7b7f91fa78182836b3aba7acbd42fa18 1082 PANTHER PTHR30195:SF16 26 537 6.0E-84 T 22-04-2016 YPTB_RS20320 0cc64ad755dab935783dcf11369c4116 715 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 22 704 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YPTB_RS20320 0cc64ad755dab935783dcf11369c4116 715 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 710 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YPTB_RS00795 ecc2c13cdff416eaf12176e1fbd0bbb8 318 Pfam PF13407 Periplasmic binding protein domain 28 275 5.2E-45 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS00795 ecc2c13cdff416eaf12176e1fbd0bbb8 318 Gene3D G3DSA:3.40.50.2300 26 138 2.7E-27 T 22-04-2016 YPTB_RS00795 ecc2c13cdff416eaf12176e1fbd0bbb8 318 PANTHER PTHR32196 1 282 3.6E-168 T 22-04-2016 YPTB_RS00795 ecc2c13cdff416eaf12176e1fbd0bbb8 318 PANTHER PTHR32196:SF20 1 282 3.6E-168 T 22-04-2016 YPTB_RS00795 ecc2c13cdff416eaf12176e1fbd0bbb8 318 Gene3D G3DSA:3.40.50.2300 139 309 4.6E-46 T 22-04-2016 YPTB_RS00795 ecc2c13cdff416eaf12176e1fbd0bbb8 318 SUPERFAMILY SSF53822 23 309 5.05E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS10330 f621d771d6eade59035bde12eb9bec59 171 Gene3D G3DSA:1.10.443.10 50 165 4.2E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS10330 f621d771d6eade59035bde12eb9bec59 171 Gene3D G3DSA:1.10.150.130 3 44 4.2E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPTB_RS10330 f621d771d6eade59035bde12eb9bec59 171 SUPERFAMILY SSF56349 3 164 2.27E-27 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS08495 135d73e14e75d1ff37d00e2cb87cfee8 272 Gene3D G3DSA:3.40.50.300 10 250 7.8E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08495 135d73e14e75d1ff37d00e2cb87cfee8 272 SUPERFAMILY SSF52540 14 241 5.21E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08495 135d73e14e75d1ff37d00e2cb87cfee8 272 PANTHER PTHR24220:SF438 17 270 1.2E-153 T 22-04-2016 YPTB_RS08495 135d73e14e75d1ff37d00e2cb87cfee8 272 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS08495 135d73e14e75d1ff37d00e2cb87cfee8 272 SMART SM00382 40 227 5.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08495 135d73e14e75d1ff37d00e2cb87cfee8 272 Pfam PF00005 ABC transporter 32 179 6.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08495 135d73e14e75d1ff37d00e2cb87cfee8 272 PANTHER PTHR24220 17 270 1.2E-153 T 22-04-2016 YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 146 1.5E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 PANTHER PTHR11695:SF581 19 355 1.2E-239 T 22-04-2016 YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 SUPERFAMILY SSF50129 4 188 5.82E-44 T 22-04-2016 IPR011032 GroES-like YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 PANTHER PTHR11695 19 355 1.2E-239 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 SUPERFAMILY SSF51735 156 310 3.95E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 Pfam PF00107 Zinc-binding dehydrogenase 189 305 2.1E-23 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 Gene3D G3DSA:3.40.50.720 182 301 1.7E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 Gene3D G3DSA:3.90.180.10 2 181 5.0E-47 T 22-04-2016 IPR011032 GroES-like YPTB_RS13780 29782138c5dd0804fb2176b18ee682be 355 SMART SM00829 15 353 0.0012 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPTB_RS16985 587f7eef41da07c27ca7480c2edd3696 233 PANTHER PTHR30231 22 229 1.8E-24 T 22-04-2016 YPTB_RS16985 587f7eef41da07c27ca7480c2edd3696 233 SUPERFAMILY SSF53098 59 229 1.74E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS16985 587f7eef41da07c27ca7480c2edd3696 233 PANTHER PTHR30231:SF4 22 229 1.8E-24 T 22-04-2016 YPTB_RS16985 587f7eef41da07c27ca7480c2edd3696 233 Pfam PF00929 Exonuclease 61 223 2.0E-13 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS16985 587f7eef41da07c27ca7480c2edd3696 233 SMART SM00479 59 232 1.6E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS16985 587f7eef41da07c27ca7480c2edd3696 233 Gene3D G3DSA:3.30.420.10 53 230 2.0E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS14050 79569ebd50ebae331cfc04d900568a59 404 Pfam PF00155 Aminotransferase class I and II 58 392 3.1E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS14050 79569ebd50ebae331cfc04d900568a59 404 Gene3D G3DSA:3.40.640.10 51 279 8.5E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS14050 79569ebd50ebae331cfc04d900568a59 404 PANTHER PTHR11751 9 404 7.6E-196 T 22-04-2016 YPTB_RS14050 79569ebd50ebae331cfc04d900568a59 404 PANTHER PTHR11751:SF303 9 404 7.6E-196 T 22-04-2016 YPTB_RS14050 79569ebd50ebae331cfc04d900568a59 404 SUPERFAMILY SSF53383 7 401 6.92E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS14050 79569ebd50ebae331cfc04d900568a59 404 Gene3D G3DSA:3.90.1150.10 280 403 1.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Pfam PF08351 Domain of unknown function (DUF1726) 64 147 2.1E-6 T 22-04-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Pfam PF13718 GNAT acetyltransferase 2 490 545 3.5E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Pfam PF13718 GNAT acetyltransferase 2 380 488 1.0E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 PANTHER PTHR10925 1 621 0.0 T 22-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 SUPERFAMILY SSF55729 358 526 2.05E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Gene3D G3DSA:3.40.50.300 157 288 5.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 16 667 50.915 T 22-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 SUPERFAMILY SSF52540 171 286 8.06E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Pfam PF05127 Helicase 195 340 2.8E-38 T 22-04-2016 IPR007807 Helicase domain YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 PANTHER PTHR10925:SF6 1 621 0.0 T 22-04-2016 YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Gene3D G3DSA:3.40.630.30 361 429 1.5E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Gene3D G3DSA:3.40.630.30 465 528 1.5E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS15050 543c711655599d863e73b5eb486b52f0 683 Pfam PF17176 tRNA-binding domain 549 669 4.7E-44 T 22-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 PANTHER PTHR32125:SF4 1 234 1.1E-87 T 22-04-2016 YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 230 1.4E-73 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 233 30.666 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 SUPERFAMILY SSF53448 11 231 3.03E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 232 1.2E-81 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 Gene3D G3DSA:3.90.550.10 10 234 1.8E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS04280 0f5736ecd15357cf27218fc475d176b3 241 PANTHER PTHR32125 1 234 1.1E-87 T 22-04-2016 YPTB_RS08810 e9afc6528489177f5b1296eeded8dfe9 434 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 5.6E-206 T 22-04-2016 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00011 YPTB_RS08810 e9afc6528489177f5b1296eeded8dfe9 434 SUPERFAMILY SSF56322 10 432 5.1E-96 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS08810 e9afc6528489177f5b1296eeded8dfe9 434 PANTHER PTHR11236 20 434 1.9E-275 T 22-04-2016 YPTB_RS08810 e9afc6528489177f5b1296eeded8dfe9 434 Pfam PF00425 chorismate binding enzyme 173 424 7.0E-70 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB_RS08810 e9afc6528489177f5b1296eeded8dfe9 434 Gene3D G3DSA:3.60.120.10 48 432 3.6E-85 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPTB_RS08810 e9afc6528489177f5b1296eeded8dfe9 434 PANTHER PTHR11236:SF17 20 434 1.9E-275 T 22-04-2016 YPTB_RS03275 2217165a576d9b486ef2249fa52ea5be 423 Pfam PF01734 Patatin-like phospholipase 28 196 1.2E-20 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 YPTB_RS03275 2217165a576d9b486ef2249fa52ea5be 423 SUPERFAMILY SSF52151 23 275 2.2E-44 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS03275 2217165a576d9b486ef2249fa52ea5be 423 PANTHER PTHR14226:SF25 1 414 4.2E-219 T 22-04-2016 YPTB_RS03275 2217165a576d9b486ef2249fa52ea5be 423 PANTHER PTHR14226 1 414 4.2E-219 T 22-04-2016 YPTB_RS03275 2217165a576d9b486ef2249fa52ea5be 423 Gene3D G3DSA:3.40.1090.10 25 66 3.8E-4 T 22-04-2016 YPTB_RS15865 62b0053046094cc4a15e79586c3cc54d 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.344 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS15865 62b0053046094cc4a15e79586c3cc54d 134 PANTHER PTHR28259 5 132 1.2E-42 T 22-04-2016 YPTB_RS15865 62b0053046094cc4a15e79586c3cc54d 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 9.3E-19 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 Pfam PF00924 Mechanosensitive ion channel 877 1076 1.2E-58 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 Gene3D G3DSA:3.30.70.100 990 1074 1.6E-22 T 22-04-2016 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 498 816 6.5E-100 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 PANTHER PTHR30347 1 1108 0.0 T 22-04-2016 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 SUPERFAMILY SSF82689 987 1087 3.92E-26 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 SUPERFAMILY SSF82861 835 918 1.7E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 Pfam PF12795 Mechanosensitive ion channel porin domain 40 278 3.5E-61 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 SUPERFAMILY SSF50182 920 985 8.17E-17 T 22-04-2016 IPR010920 LSM domain YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 Gene3D G3DSA:2.30.30.60 935 984 1.3E-17 T 22-04-2016 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 949 983 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YPTB_RS05455 2f2c9eeb3910449ac7cf71969eea6746 1120 PANTHER PTHR30347:SF2 1 1108 0.0 T 22-04-2016 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.8E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 Pfam PF01245 Ribosomal protein L19 3 113 9.6E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 PIRSF PIRSF002191 1 115 1.6E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.023 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 SUPERFAMILY SSF50104 2 114 3.11E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04645 a1e436bd9273e21431549c822b2d26dd 115 PANTHER PTHR15680 1 114 1.6E-58 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 PIRSF PIRSF000903 1 275 9.7E-122 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 PANTHER PTHR24032:SF27 1 278 1.2E-179 T 22-04-2016 YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 275 9.4E-149 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 PANTHER PTHR24032 1 278 1.2E-179 T 22-04-2016 YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 Gene3D G3DSA:3.60.21.10 169 272 7.4E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 Gene3D G3DSA:3.60.21.10 1 132 7.4E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 3.2E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 SUPERFAMILY SSF56300 1 259 6.53E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS03545 527555fc9e84cb2d74f5ef228858b29b 289 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.521 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 SMART SM00354 12 82 7.1E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 PANTHER PTHR30146:SF33 12 344 9.7E-247 T 22-04-2016 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 SUPERFAMILY SSF53822 70 324 1.54E-42 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 Pfam PF13377 Periplasmic binding protein-like domain 179 328 3.5E-26 T 22-04-2016 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 Gene3D G3DSA:1.10.260.40 11 61 9.0E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 Gene3D G3DSA:3.40.50.2300 62 184 5.2E-29 T 22-04-2016 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 PANTHER PTHR30146 12 344 9.7E-247 T 22-04-2016 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 SUPERFAMILY SSF47413 12 70 1.35E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 Gene3D G3DSA:3.40.50.2300 185 343 5.9E-36 T 22-04-2016 YPTB_RS14100 5de0cdf8f37a7e2f0fb64b747efaa328 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 4.8E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 Pfam PF03472 Autoinducer binding domain 13 157 2.2E-31 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 SUPERFAMILY SSF46894 174 242 2.41E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 SUPERFAMILY SSF75516 13 162 1.16E-35 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 SMART SM00421 179 236 7.1E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 Gene3D G3DSA:3.30.450.80 12 184 8.7E-39 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 Gene3D G3DSA:1.10.10.10 185 242 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17645 c31f12a54fe06305d8e3bacb05cd3a75 247 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 233 3.6E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPTB_RS07710 0c94b5e4dcb278b8f0ce4b68841cab31 236 PANTHER PTHR30098 1 229 5.0E-91 T 22-04-2016 YPTB_RS07710 0c94b5e4dcb278b8f0ce4b68841cab31 236 SUPERFAMILY SSF55729 3 229 1.17E-94 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS07710 0c94b5e4dcb278b8f0ce4b68841cab31 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 97.06 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YPTB_RS07710 0c94b5e4dcb278b8f0ce4b68841cab31 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 214 1.6E-76 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YPTB_RS07710 0c94b5e4dcb278b8f0ce4b68841cab31 236 PANTHER PTHR30098:SF2 1 229 5.0E-91 T 22-04-2016 YPTB_RS07710 0c94b5e4dcb278b8f0ce4b68841cab31 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 203 1.7E-73 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 SUPERFAMILY SSF52540 3 213 3.33E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 PANTHER PTHR21343 2 215 3.1E-123 T 22-04-2016 YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 Gene3D G3DSA:3.40.50.300 3 213 5.8E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 30.125 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.1E-60 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 PANTHER PTHR21343:SF13 2 215 3.1E-123 T 22-04-2016 YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 PIRSF PIRSF006755 1 230 9.9E-84 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS06570 2adf1b9e788be94357c3817cba7964c0 240 Pfam PF13500 AAA domain 5 211 8.7E-36 T 22-04-2016 YPTB_RS12975 bf7962d8e12b53afdf904ab5c287cdaf 815 Pfam PF13953 PapC C-terminal domain 739 801 1.3E-10 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS12975 bf7962d8e12b53afdf904ab5c287cdaf 815 PANTHER PTHR30451 1 815 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS12975 bf7962d8e12b53afdf904ab5c287cdaf 815 Pfam PF00577 Outer membrane usher protein 234 712 2.1E-30 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS12975 bf7962d8e12b53afdf904ab5c287cdaf 815 PANTHER PTHR30451:SF5 1 815 0.0 T 22-04-2016 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 PANTHER PTHR11879 1 395 2.3E-281 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 PANTHER PTHR11879:SF11 1 395 2.3E-281 T 22-04-2016 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 Gene3D G3DSA:3.40.640.10 45 315 1.4E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 Pfam PF00155 Aminotransferase class I and II 27 392 4.1E-91 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS07915 b79bf534bb9bbc167993cbba9f5256b5 396 SUPERFAMILY SSF53383 1 396 5.97E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 Pfam PF02107 Flagellar L-ring protein 59 242 4.2E-59 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 183 199 4.0E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 157 172 4.0E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 220 234 4.0E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 204 218 4.0E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 84 96 4.0E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 PANTHER PTHR34933:SF1 16 243 3.3E-86 T 22-04-2016 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 Hamap MF_00415 Flagellar L-ring protein [flgH]. 15 241 27.546 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPTB_RS09240 4efd3434db576b3931562c304e36605e 243 PANTHER PTHR34933 16 243 3.3E-86 T 22-04-2016 YPTB_RS01025 c5471b9ad4e9483d2e0d453bbbc119d0 358 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 15 355 57.155 T 22-04-2016 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 UniPathway: UPA00566 YPTB_RS01025 c5471b9ad4e9483d2e0d453bbbc119d0 358 Gene3D G3DSA:3.30.1890.10 265 326 1.3E-88 T 22-04-2016 YPTB_RS01025 c5471b9ad4e9483d2e0d453bbbc119d0 358 Gene3D G3DSA:3.30.1890.10 61 229 1.3E-88 T 22-04-2016 YPTB_RS01025 c5471b9ad4e9483d2e0d453bbbc119d0 358 PANTHER PTHR32309:SF16 2 358 2.4E-260 T 22-04-2016 YPTB_RS01025 c5471b9ad4e9483d2e0d453bbbc119d0 358 SUPERFAMILY SSF160355 61 326 6.15E-83 T 22-04-2016 YPTB_RS01025 c5471b9ad4e9483d2e0d453bbbc119d0 358 Pfam PF02706 Chain length determinant protein 22 99 1.9E-12 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 YPTB_RS01025 c5471b9ad4e9483d2e0d453bbbc119d0 358 PANTHER PTHR32309 2 358 2.4E-260 T 22-04-2016 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 1.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 1.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 Gene3D G3DSA:1.10.10.60 166 223 2.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 Pfam PF02311 AraC-like ligand binding domain 18 154 1.8E-25 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 Pfam PF12833 Helix-turn-helix domain 193 271 6.1E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 SUPERFAMILY SSF51215 17 157 4.58E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 Gene3D G3DSA:1.10.10.60 224 272 6.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 SUPERFAMILY SSF46689 171 221 6.0E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 SUPERFAMILY SSF46689 223 272 1.43E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 PANTHER PTHR11019:SF86 1 273 1.2E-184 T 22-04-2016 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 56.944 T 22-04-2016 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 PANTHER PTHR11019 1 273 1.2E-184 T 22-04-2016 YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 Gene3D G3DSA:2.60.120.10 1 78 2.5E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS02240 0eb8c4c3f6f6bc49aa6360c71bcacd9d 273 SMART SM00342 187 270 7.5E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 SUPERFAMILY SSF81442 43 560 3.14E-179 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 3.3E-135 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 Gene3D G3DSA:1.20.210.10 40 589 2.8E-187 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PANTHER PTHR10422:SF26 33 614 0.0 T 22-04-2016 YPTB_RS05275 c7740246da51ef6159bc73f5a49cbcd2 663 PANTHER PTHR10422 33 614 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:1.10.150.170 119 222 6.1E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 PANTHER PTHR11265 9 320 8.6E-158 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 317 5.1E-126 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 318 38.391 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 PANTHER PTHR11265:SF0 9 320 8.6E-158 T 22-04-2016 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 PIRSF PIRSF004486 8 319 1.5E-100 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF53335 220 318 1.14E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF53335 14 120 1.14E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF81799 121 220 2.49E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:3.40.50.150 223 318 2.3E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:3.40.50.150 14 117 2.3E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS03815 e3c80e7bfe426df4c6f63d87d75c58e1 320 Pfam PF01795 MraW methylase family 12 317 1.9E-116 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 SUPERFAMILY SSF52540 4 249 8.57E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 PANTHER PTHR24220:SF524 5 265 8.9E-147 T 22-04-2016 YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 PANTHER PTHR24220 5 265 8.9E-147 T 22-04-2016 YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 SMART SM00382 28 217 7.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 SUPERFAMILY SSF50331 243 330 1.45E-5 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 Pfam PF00005 ABC transporter 19 167 4.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 Gene3D G3DSA:3.40.50.300 4 241 1.9E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15010 86279dcd71c86d20db29fcc40f54a95c 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 5.8E-68 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 PANTHER PTHR10000 1 269 2.5E-163 T 22-04-2016 YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 PANTHER PTHR10000:SF29 1 269 2.5E-163 T 22-04-2016 YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 2.9E-28 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 SUPERFAMILY SSF56784 1 268 8.68E-78 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 Gene3D G3DSA:3.40.50.1000 184 268 5.9E-60 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 Gene3D G3DSA:3.40.50.1000 1 76 5.9E-60 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 3.4E-69 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS21275 7668232d4df48ff5061706885ac956fe 269 Gene3D G3DSA:3.30.1240.10 87 183 1.4E-39 T 22-04-2016 YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 SUPERFAMILY SSF82607 11 104 1.57E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 PANTHER PTHR33449 1 110 2.6E-54 T 22-04-2016 YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 PIRSF PIRSF004555 3 110 6.4E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 Gene3D G3DSA:3.30.1310.10 1 110 1.8E-49 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.965 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 PANTHER PTHR33449:SF1 1 110 2.6E-54 T 22-04-2016 YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 3.4E-41 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTB_RS05485 6140810bea07c4c4c7ed660db78322e5 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 4.1E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 SUPERFAMILY SSF52833 25 144 6.53E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 PANTHER PTHR10438:SF266 9 144 3.0E-65 T 22-04-2016 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 138 3.9E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 Pfam PF00085 Thioredoxin 37 137 8.5E-27 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 PRINTS PR00421 Thioredoxin family signature 103 114 6.7E-8 T 22-04-2016 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 PRINTS PR00421 Thioredoxin family signature 63 72 6.7E-8 T 22-04-2016 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 PRINTS PR00421 Thioredoxin family signature 55 63 6.7E-8 T 22-04-2016 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 PANTHER PTHR10438 9 144 3.0E-65 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPTB_RS04760 b4a9e9e28fdd49f0fa85b225d5e6771f 145 Gene3D G3DSA:3.40.30.10 31 140 1.8E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS04480 f0f9adb7c2d8e9134b5d10cd7ff3b81a 236 PANTHER PTHR34227 16 236 5.9E-105 T 22-04-2016 YPTB_RS04480 f0f9adb7c2d8e9134b5d10cd7ff3b81a 236 Gene3D G3DSA:1.10.3480.10 17 236 9.0E-57 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS04480 f0f9adb7c2d8e9134b5d10cd7ff3b81a 236 SUPERFAMILY SSF89155 18 236 9.68E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS04480 f0f9adb7c2d8e9134b5d10cd7ff3b81a 236 PANTHER PTHR34227:SF5 16 236 5.9E-105 T 22-04-2016 YPTB_RS04480 f0f9adb7c2d8e9134b5d10cd7ff3b81a 236 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 6 236 42.747 T 22-04-2016 IPR028611 Tat proofreading chaperone DmsD GO:0005048 YPTB_RS04480 f0f9adb7c2d8e9134b5d10cd7ff3b81a 236 Pfam PF02613 Nitrate reductase delta subunit 80 192 2.9E-20 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS04480 f0f9adb7c2d8e9134b5d10cd7ff3b81a 236 PIRSF PIRSF004690 19 236 1.5E-62 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 SUPERFAMILY SSF46785 21 165 2.12E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 SMART SM00347 46 148 5.0E-31 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 Gene3D G3DSA:1.10.10.10 15 166 3.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 Pfam PF01047 MarR family 53 112 5.5E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 PANTHER PTHR18964:SF141 44 170 2.9E-48 T 22-04-2016 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 PANTHER PTHR18964 44 170 2.9E-48 T 22-04-2016 YPTB_RS04780 ff8e1f90ec3232ca99d633b736c3f540 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site YPTB_RS20115 9f30902f0d9d4769dbc80fb1f10db6bb 326 PANTHER PTHR30160 1 310 7.7E-56 T 22-04-2016 YPTB_RS20115 9f30902f0d9d4769dbc80fb1f10db6bb 326 Gene3D G3DSA:3.40.50.2000 2 103 4.2E-28 T 22-04-2016 YPTB_RS20115 9f30902f0d9d4769dbc80fb1f10db6bb 326 PANTHER PTHR30160:SF7 1 310 7.7E-56 T 22-04-2016 YPTB_RS20115 9f30902f0d9d4769dbc80fb1f10db6bb 326 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 302 5.4E-13 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPTB_RS20115 9f30902f0d9d4769dbc80fb1f10db6bb 326 SUPERFAMILY SSF53756 2 324 1.67E-56 T 22-04-2016 YPTB_RS20115 9f30902f0d9d4769dbc80fb1f10db6bb 326 Gene3D G3DSA:3.40.50.2000 169 323 2.2E-26 T 22-04-2016 YPTB_RS13665 f290d5eacfb6173ac8d898a7cb02c114 274 Gene3D G3DSA:1.10.3720.10 3 263 1.7E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13665 f290d5eacfb6173ac8d898a7cb02c114 274 SUPERFAMILY SSF161098 2 270 4.21E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13665 f290d5eacfb6173ac8d898a7cb02c114 274 PANTHER PTHR32243:SF35 1 272 1.6E-186 T 22-04-2016 YPTB_RS13665 f290d5eacfb6173ac8d898a7cb02c114 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 1.9E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13665 f290d5eacfb6173ac8d898a7cb02c114 274 PANTHER PTHR32243 1 272 1.6E-186 T 22-04-2016 YPTB_RS11675 0f85e307ff8050920902dae56d801a53 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 2.4E-6 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPTB_RS11675 0f85e307ff8050920902dae56d801a53 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 1.0E-58 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPTB_RS11675 0f85e307ff8050920902dae56d801a53 196 SUPERFAMILY SSF52540 7 196 2.66E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11675 0f85e307ff8050920902dae56d801a53 196 Gene3D G3DSA:3.40.50.300 3 196 9.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11675 0f85e307ff8050920902dae56d801a53 196 PANTHER PTHR30069 3 196 4.3E-70 T 22-04-2016 YPTB_RS11675 0f85e307ff8050920902dae56d801a53 196 PIRSF PIRSF015617 1 196 1.2E-67 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPTB_RS11675 0f85e307ff8050920902dae56d801a53 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 4.3E-78 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 SUPERFAMILY SSF69864 190 442 8.63E-81 T 22-04-2016 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.9E-166 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 452 74.134 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:1.10.287.400 377 439 3.3E-35 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 PANTHER PTHR11587 1 425 7.6E-181 T 22-04-2016 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:3.90.1260.10 175 372 1.5E-63 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 Pfam PF00764 Arginosuccinate synthase 16 409 2.0E-58 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 PANTHER PTHR11587:SF2 1 425 7.6E-181 T 22-04-2016 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 SUPERFAMILY SSF52402 3 186 7.68E-35 T 22-04-2016 YPTB_RS08685 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:3.40.50.620 4 174 1.5E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS12395 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 8.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12395 3dbc9365b6e59ed26ac7fe7c4c818bff 296 PANTHER PTHR30465 7 296 3.3E-194 T 22-04-2016 YPTB_RS12395 3dbc9365b6e59ed26ac7fe7c4c818bff 296 SUPERFAMILY SSF161098 90 277 6.28E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12395 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Gene3D G3DSA:1.10.3720.10 86 292 7.0E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12395 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 8.6E-7 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB_RS12395 3dbc9365b6e59ed26ac7fe7c4c818bff 296 PANTHER PTHR30465:SF49 7 296 3.3E-194 T 22-04-2016 YPTB_RS08380 dd5ed1ae3c4753c323c3f02fa44419d8 330 Pfam PF13407 Periplasmic binding protein domain 27 298 1.2E-63 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS08380 dd5ed1ae3c4753c323c3f02fa44419d8 330 PANTHER PTHR30036:SF2 3 330 1.6E-151 T 22-04-2016 YPTB_RS08380 dd5ed1ae3c4753c323c3f02fa44419d8 330 Gene3D G3DSA:3.40.50.2300 142 292 2.0E-54 T 22-04-2016 YPTB_RS08380 dd5ed1ae3c4753c323c3f02fa44419d8 330 Gene3D G3DSA:3.40.50.2300 26 141 1.1E-27 T 22-04-2016 YPTB_RS08380 dd5ed1ae3c4753c323c3f02fa44419d8 330 SUPERFAMILY SSF53822 25 329 3.34E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS08380 dd5ed1ae3c4753c323c3f02fa44419d8 330 PANTHER PTHR30036 3 330 1.6E-151 T 22-04-2016 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.26E-29 T 22-04-2016 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.26E-29 T 22-04-2016 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.26E-29 T 22-04-2016 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.26E-29 T 22-04-2016 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.26E-29 T 22-04-2016 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 Pfam PF01202 Shikimate kinase 13 170 8.7E-57 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 PANTHER PTHR21087 1 173 3.4E-73 T 22-04-2016 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 SUPERFAMILY SSF52540 4 170 2.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.487 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS20275 72be2aa6396ad0abaa3a71920db8eba5 173 Gene3D G3DSA:3.40.50.300 2 172 5.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 PANTHER PTHR11749 2 222 8.9E-145 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 PANTHER PTHR11749:SF7 2 222 8.9E-145 T 22-04-2016 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 Gene3D G3DSA:3.20.20.70 1 222 1.8E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 SUPERFAMILY SSF51366 3 218 1.57E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 PIRSF PIRSF001461 1 225 2.0E-107 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.3E-93 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPTB_RS20255 ef69a3553b4753b779e7a7a6afa8ff8c 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 5.9E-99 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPTB_RS00690 f27a0d6b72564a4ed8639f6ec9366d8e 205 Gene3D G3DSA:3.30.1500.10 1 182 1.8E-66 T 22-04-2016 IPR010495 Haem-binding HasA YPTB_RS00690 f27a0d6b72564a4ed8639f6ec9366d8e 205 SUPERFAMILY SSF54621 2 176 1.14E-67 T 22-04-2016 IPR010495 Haem-binding HasA YPTB_RS00690 f27a0d6b72564a4ed8639f6ec9366d8e 205 PIRSF PIRSF019876 1 205 3.2E-85 T 22-04-2016 IPR010495 Haem-binding HasA YPTB_RS00690 f27a0d6b72564a4ed8639f6ec9366d8e 205 Pfam PF06438 Heme-binding protein A (HasA) 1 205 2.9E-87 T 22-04-2016 IPR010495 Haem-binding HasA YPTB_RS05635 0d3137168b103d43878cea70806de169 269 PANTHER PTHR40590 1 268 4.6E-123 T 22-04-2016 YPTB_RS05635 0d3137168b103d43878cea70806de169 269 Pfam PF01963 TraB family 31 267 7.3E-40 T 22-04-2016 IPR002816 Pheromone shutdown, TraB YPTB_RS19910 4d06cdcbdaa96a508fb6a347610bdc61 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19910 4d06cdcbdaa96a508fb6a347610bdc61 38 SUPERFAMILY SSF57840 1 38 5.49E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19910 4d06cdcbdaa96a508fb6a347610bdc61 38 PANTHER PTHR18804 1 38 4.0E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19910 4d06cdcbdaa96a508fb6a347610bdc61 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.7E-22 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19910 4d06cdcbdaa96a508fb6a347610bdc61 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 22-04-2016 YPTB_RS19910 4d06cdcbdaa96a508fb6a347610bdc61 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.971 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19910 4d06cdcbdaa96a508fb6a347610bdc61 38 Pfam PF00444 Ribosomal protein L36 1 38 1.6E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 Gene3D G3DSA:3.40.718.10 1 329 1.4E-132 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 334 142.052 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 PIRSF PIRSF002465 1 334 7.3E-121 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 332 5.0E-131 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 PANTHER PTHR30100:SF1 1 334 2.0E-140 T 22-04-2016 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 SUPERFAMILY SSF53659 1 330 1.4E-99 T 22-04-2016 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 PANTHER PTHR30100 1 334 2.0E-140 T 22-04-2016 YPTB_RS13445 f5de2c5bceb0b5d6a55d2c1683cee7bb 334 Pfam PF02504 Fatty acid synthesis protein 1 321 3.8E-114 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 SMART SM00987 49 210 2.2E-41 T 22-04-2016 YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 Gene3D G3DSA:3.40.470.10 6 221 4.5E-103 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 4.9E-89 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 PANTHER PTHR11264:SF10 4 228 9.6E-182 T 22-04-2016 YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.644 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 SUPERFAMILY SSF52141 6 221 9.16E-97 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 PANTHER PTHR11264 4 228 9.6E-182 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 7.3E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPTB_RS15695 58641ced9bdde71609856abbc6afba2c 228 SMART SM00986 49 210 2.2E-41 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPTB_RS05520 97b0e37f25e8294b0078fd8b987f5388 299 Gene3D G3DSA:3.40.50.720 4 150 1.7E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05520 97b0e37f25e8294b0078fd8b987f5388 299 SUPERFAMILY SSF51735 5 291 1.09E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05520 97b0e37f25e8294b0078fd8b987f5388 299 Gene3D G3DSA:3.90.25.10 151 297 3.8E-52 T 22-04-2016 YPTB_RS05520 97b0e37f25e8294b0078fd8b987f5388 299 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 269 1.9E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05520 97b0e37f25e8294b0078fd8b987f5388 299 PANTHER PTHR10366:SF33 1 297 4.1E-126 T 22-04-2016 YPTB_RS05520 97b0e37f25e8294b0078fd8b987f5388 299 PANTHER PTHR10366 1 297 4.1E-126 T 22-04-2016 YPTB_RS05520 97b0e37f25e8294b0078fd8b987f5388 299 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 3 296 1.4E-132 T 22-04-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833|UniPathway: UPA00055|UniPathway: UPA00281 YPTB_RS03585 59c5d1d278d4da5a6f6e6a04169a79ea 247 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 184 247 8.4E-11 T 22-04-2016 IPR018754 Protein of unknown function DUF2285 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 PANTHER PTHR10815:SF5 1 167 1.5E-62 T 22-04-2016 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 83 8.0E-12 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.6E-37 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 Gene3D G3DSA:1.10.10.10 86 168 5.2E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 SUPERFAMILY SSF53155 7 92 3.18E-6 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 169 37.657 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 PANTHER PTHR10815 1 167 1.5E-62 T 22-04-2016 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.2E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS12120 a7882f9c8a5327a7b5abac011b53d4b9 172 SUPERFAMILY SSF46767 86 169 3.92E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPTB_RS09570 a3f5235053e516d6a57aeb4b7db8eff5 71 Gene3D G3DSA:3.30.160.60 22 42 5.3E-4 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YPTB_RS09570 a3f5235053e516d6a57aeb4b7db8eff5 71 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.1E-19 T 22-04-2016 IPR007684 Zinc finger, Ogr/Delta-type YPTB_RS09910 e814b32d453db2b7ef3d1daca830133c 215 Pfam PF07105 Protein of unknown function (DUF1367) 28 215 1.8E-49 T 22-04-2016 IPR009797 Protein of unknown function DUF1367 YPTB_RS09040 02ae1010b4a59796dc16f9478c0e1a08 285 Gene3D G3DSA:3.40.830.10 5 269 1.5E-23 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPTB_RS09040 02ae1010b4a59796dc16f9478c0e1a08 285 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 8.5E-85 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPTB_RS09040 02ae1010b4a59796dc16f9478c0e1a08 285 SUPERFAMILY SSF53213 12 279 3.27E-46 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPTB_RS09040 02ae1010b4a59796dc16f9478c0e1a08 285 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 3.2E-155 T 22-04-2016 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15|UniPathway: UPA00208 YPTB_RS06610 c903d51151d13a2fe98b9c39684e274f 81 PANTHER PTHR33359 1 81 1.9E-26 T 22-04-2016 YPTB_RS06610 c903d51151d13a2fe98b9c39684e274f 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.1E-24 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 YPTB_RS06610 c903d51151d13a2fe98b9c39684e274f 81 Pfam PF02597 ThiS family 4 81 5.5E-21 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPTB_RS06610 c903d51151d13a2fe98b9c39684e274f 81 Gene3D G3DSA:3.10.20.30 1 81 1.1E-24 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS06610 c903d51151d13a2fe98b9c39684e274f 81 SUPERFAMILY SSF54285 1 81 3.18E-22 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTB_RS16630 d4fd8a887586edffa0ce34998d3d472f 728 SUPERFAMILY SSF103515 420 728 2.88E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS16630 d4fd8a887586edffa0ce34998d3d472f 728 Gene3D G3DSA:2.40.128.130 420 728 2.7E-48 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS16630 d4fd8a887586edffa0ce34998d3d472f 728 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 355 713 3.3E-14 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS16630 d4fd8a887586edffa0ce34998d3d472f 728 SMART SM00869 447 718 1.1E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS16630 d4fd8a887586edffa0ce34998d3d472f 728 Pfam PF03797 Autotransporter beta-domain 446 712 7.4E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 279 292 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 217 232 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 493 506 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 293 306 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 431 442 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 146 159 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 203 216 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 170 178 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PRINTS PR00415 Aconitase family signature 372 386 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 Gene3D G3DSA:3.40.1060.10 250 367 2.4E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670:SF1 7 393 0.0 T 22-04-2016 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670:SF1 416 650 0.0 T 22-04-2016 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670:SF1 666 711 0.0 T 22-04-2016 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670:SF1 750 890 0.0 T 22-04-2016 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 Pfam PF00694 Aconitase C-terminal domain 691 818 4.9E-49 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 SUPERFAMILY SSF53732 11 626 8.89E-223 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670 7 393 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670 416 650 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670 666 711 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 PANTHER PTHR11670 750 890 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 Gene3D G3DSA:3.20.19.10 636 889 1.2E-81 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 Gene3D G3DSA:3.30.499.10 368 575 2.5E-65 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 SUPERFAMILY SSF52016 629 890 3.73E-90 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 Gene3D G3DSA:3.30.499.10 30 249 6.1E-79 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS11715 29d5bd4fcb3daa405baa293c9ee5875a 890 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 2.2E-185 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS01390 548a42b107df3e29d6bf2a2c31b9e670 228 Gene3D G3DSA:2.60.40.360 27 117 4.4E-4 T 22-04-2016 IPR008962 PapD-like YPTB_RS01390 548a42b107df3e29d6bf2a2c31b9e670 228 SUPERFAMILY SSF49354 20 126 1.47E-7 T 22-04-2016 IPR008962 PapD-like YPTB_RS01390 548a42b107df3e29d6bf2a2c31b9e670 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 121 5.4E-5 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS19535 95b8ffb02d99f35f4b484ad67a959d02 77 Pfam PF05954 Phage late control gene D protein (GPD) 2 59 1.3E-6 T 22-04-2016 YPTB_RS19535 95b8ffb02d99f35f4b484ad67a959d02 77 PANTHER PTHR32305 1 70 4.5E-24 T 22-04-2016 YPTB_RS19535 95b8ffb02d99f35f4b484ad67a959d02 77 PANTHER PTHR32305:SF11 1 70 4.5E-24 T 22-04-2016 YPTB_RS19535 95b8ffb02d99f35f4b484ad67a959d02 77 SUPERFAMILY SSF69279 2 59 2.21E-13 T 22-04-2016 YPTB_RS20090 d37417b7762adabd3ddffd605e045dc1 73 Pfam PF09526 Probable metal-binding protein (DUF2387) 10 59 7.9E-20 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 YPTB_RS20090 d37417b7762adabd3ddffd605e045dc1 73 Gene3D G3DSA:3.30.50.10 18 52 2.2E-4 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 YPTB_RS20090 d37417b7762adabd3ddffd605e045dc1 73 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 10 67 5.8E-30 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 Pfam PF01047 MarR family 25 63 1.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 Gene3D G3DSA:3.30.420.40 225 376 2.0E-47 T 22-04-2016 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 SUPERFAMILY SSF53067 88 394 1.82E-55 T 22-04-2016 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 Pfam PF00480 ROK family 89 392 5.1E-89 T 22-04-2016 IPR000600 ROK family YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 SUPERFAMILY SSF46785 14 79 1.48E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 Gene3D G3DSA:1.10.10.10 14 79 9.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 ProSitePatterns PS01125 ROK family signature. 220 247 - T 22-04-2016 IPR000600 ROK family YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 PANTHER PTHR18964:SF128 306 403 7.9E-218 T 22-04-2016 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 PANTHER PTHR18964:SF128 64 289 7.9E-218 T 22-04-2016 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 PANTHER PTHR18964 306 403 7.9E-218 T 22-04-2016 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 PANTHER PTHR18964 64 289 7.9E-218 T 22-04-2016 YPTB_RS06185 30061104628cf8509e857c81c1d5129c 408 Gene3D G3DSA:3.30.420.40 85 224 3.9E-30 T 22-04-2016 YPTB_RS17085 862466af9af778e29d0d5f1ead46662b 658 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 62 388 7.1E-15 T 22-04-2016 IPR010090 Phage tail tape measure protein YPTB_RS17085 862466af9af778e29d0d5f1ead46662b 658 Pfam PF10145 Phage-related minor tail protein 86 284 8.0E-15 T 22-04-2016 IPR010090 Phage tail tape measure protein YPTB_RS10820 76ba2d689a921deac35ef126dfbb5831 268 Gene3D G3DSA:3.60.15.10 20 264 1.2E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS10820 76ba2d689a921deac35ef126dfbb5831 268 PANTHER PTHR23200 10 268 1.8E-46 T 22-04-2016 YPTB_RS10820 76ba2d689a921deac35ef126dfbb5831 268 SUPERFAMILY SSF56281 28 265 7.86E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS10820 76ba2d689a921deac35ef126dfbb5831 268 PANTHER PTHR23200:SF37 10 268 1.8E-46 T 22-04-2016 YPTB_RS10820 76ba2d689a921deac35ef126dfbb5831 268 Pfam PF00753 Metallo-beta-lactamase superfamily 36 200 1.5E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 56 2.8E-5 T 22-04-2016 YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 78 220 4.4E-28 T 22-04-2016 YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 PANTHER PTHR18964 58 369 2.1E-87 T 22-04-2016 YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:1.10.10.10 14 77 6.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 PANTHER PTHR18964:SF109 58 369 2.1E-87 T 22-04-2016 YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 SUPERFAMILY SSF53067 81 365 6.2E-32 T 22-04-2016 YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 Pfam PF00480 ROK family 94 242 6.8E-18 T 22-04-2016 IPR000600 ROK family YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 SUPERFAMILY SSF46785 12 76 1.76E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11070 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 221 344 1.7E-14 T 22-04-2016 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 Pfam PF01278 Omptin family 32 311 2.3E-115 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 SUPERFAMILY SSF69917 31 311 3.66E-98 T 22-04-2016 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 Gene3D G3DSA:2.40.128.90 31 311 5.9E-108 T 22-04-2016 IPR023619 Peptidase A26 GO:0004190 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 39 53 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 188 209 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 59 84 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 210 231 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 145 172 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 117 144 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 236 256 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 85 110 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PRINTS PR00482 Omptin serine protease signature 257 277 6.5E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS07010 fe53ef73828f1336e27e8b33549e5a1f 311 PIRSF PIRSF001522 1 311 9.0E-127 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPTB_RS19670 b6e7e8760688d71301f241e0040c1e55 165 PANTHER PTHR35850:SF2 1 165 2.8E-96 T 22-04-2016 YPTB_RS19670 b6e7e8760688d71301f241e0040c1e55 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 160 1.1E-54 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS19670 b6e7e8760688d71301f241e0040c1e55 165 PANTHER PTHR35850 1 165 2.8E-96 T 22-04-2016 YPTB_RS19670 b6e7e8760688d71301f241e0040c1e55 165 PIRSF PIRSF028301 1 165 1.6E-60 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS19670 b6e7e8760688d71301f241e0040c1e55 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 3.2E-54 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPTB_RS16185 1a7349ff74bd00cf878cfe39953ef0cb 198 Pfam PF01351 Ribonuclease HII 14 189 1.1E-38 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain YPTB_RS16185 1a7349ff74bd00cf878cfe39953ef0cb 198 SUPERFAMILY SSF53098 5 196 5.01E-69 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS16185 1a7349ff74bd00cf878cfe39953ef0cb 198 Gene3D G3DSA:3.30.420.10 12 152 8.4E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS16185 1a7349ff74bd00cf878cfe39953ef0cb 198 PANTHER PTHR10954 5 198 3.3E-83 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 YPTB_RS16185 1a7349ff74bd00cf878cfe39953ef0cb 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.211 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 Pfam PF00128 Alpha amylase, catalytic domain 228 606 1.6E-41 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357 81 95 4.2E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357 436 682 4.2E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357 225 322 4.2E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357 351 412 4.2E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357 165 209 4.2E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 SUPERFAMILY SSF51445 376 653 5.07E-77 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 SUPERFAMILY SSF51445 182 320 5.07E-77 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357:SF11 81 95 4.2E-125 T 22-04-2016 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357:SF11 436 682 4.2E-125 T 22-04-2016 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357:SF11 225 322 4.2E-125 T 22-04-2016 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357:SF11 351 412 4.2E-125 T 22-04-2016 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PANTHER PTHR10357:SF11 165 209 4.2E-125 T 22-04-2016 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 Gene3D G3DSA:3.20.20.80 185 654 7.7E-90 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 PIRSF PIRSF036917 1 686 0.0 T 22-04-2016 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 YPTB_RS21110 ace662e9141b9e737668e5194453ba1e 687 SMART SM00642 195 647 3.7E-81 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS17540 5aed5e70e11fd82126fc9c8fb99cc4b0 765 SUPERFAMILY SSF51261 31 158 1.2E-6 T 22-04-2016 IPR011055 Duplicated hybrid motif YPTB_RS17540 5aed5e70e11fd82126fc9c8fb99cc4b0 765 Gene3D G3DSA:2.70.70.10 30 158 1.9E-11 T 22-04-2016 YPTB_RS17540 5aed5e70e11fd82126fc9c8fb99cc4b0 765 Pfam PF01551 Peptidase family M23 42 155 4.1E-6 T 22-04-2016 IPR016047 Peptidase M23 YPTB_RS17540 5aed5e70e11fd82126fc9c8fb99cc4b0 765 SUPERFAMILY SSF53955 503 573 9.84E-10 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS17540 5aed5e70e11fd82126fc9c8fb99cc4b0 765 SUPERFAMILY SSF53955 618 657 9.84E-10 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS17190 d49ca5fb44c56e7bd6256343949746e1 88 PANTHER PTHR39585:SF1 1 88 1.3E-40 T 22-04-2016 YPTB_RS17190 d49ca5fb44c56e7bd6256343949746e1 88 Gene3D G3DSA:1.10.150.250 3 85 2.5E-32 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YPTB_RS17190 d49ca5fb44c56e7bd6256343949746e1 88 PANTHER PTHR39585 1 88 1.3E-40 T 22-04-2016 YPTB_RS17190 d49ca5fb44c56e7bd6256343949746e1 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 6.6E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YPTB_RS17190 d49ca5fb44c56e7bd6256343949746e1 88 SUPERFAMILY SSF109910 2 78 1.2E-27 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YPTB_RS07630 d6a0a01660040c52746bb85e6203b804 191 Pfam PF12883 Protein of unknown function (DUF3828) 41 174 1.9E-13 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 Gene3D G3DSA:3.20.20.70 2 239 9.8E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 SUPERFAMILY SSF51395 1 302 8.79E-71 T 22-04-2016 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 PIRSF PIRSF006621 1 312 3.4E-82 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.76 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 PANTHER PTHR11082:SF26 1 312 1.3E-204 T 22-04-2016 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 PANTHER PTHR11082 1 312 1.3E-204 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS06735 faed05bd1fa6657af2184377ad238aeb 312 Pfam PF01207 Dihydrouridine synthase (Dus) 4 290 1.5E-88 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 PANTHER PTHR21109 1 71 2.6E-27 T 22-04-2016 YPTB_RS18465 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 PANTHER PTHR32328:SF0 2 453 1.2E-258 T 22-04-2016 YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 450 2.0E-170 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 SUPERFAMILY SSF53383 72 347 2.1E-43 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.1E-9 T 22-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 PANTHER PTHR32328 2 453 1.2E-258 T 22-04-2016 YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 Gene3D G3DSA:3.40.640.10 132 317 5.2E-30 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 246.634 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPTB_RS21225 4499f8af570bfe958c90354d8df8aeeb 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 459 1.7E-185 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 PANTHER PTHR24220:SF544 12 328 2.2E-201 T 22-04-2016 YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 5.9E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 Gene3D G3DSA:3.40.50.300 7 267 2.6E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 PANTHER PTHR24220 12 328 2.2E-201 T 22-04-2016 YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 SUPERFAMILY SSF52540 22 263 5.45E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.3E-29 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 Pfam PF00005 ABC transporter 40 191 5.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS11545 957f9b9ebfb489a97adc024be211b7b1 333 SMART SM00382 48 241 4.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 SUPERFAMILY SSF90123 3 321 1.83E-75 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 PANTHER PTHR24221 1 570 4.0E-254 T 22-04-2016 YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 Pfam PF00005 ABC transporter 350 498 3.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 PANTHER PTHR24221:SF240 1 570 4.0E-254 T 22-04-2016 YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 SMART SM00382 358 544 2.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 SUPERFAMILY SSF52540 322 569 5.21E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 Pfam PF00664 ABC transporter transmembrane region 17 287 4.9E-52 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 Gene3D G3DSA:3.40.50.300 333 562 2.4E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS08895 c6dde945b558b9266250d8f3d00dfe62 572 Gene3D G3DSA:1.20.1560.10 3 315 8.4E-71 T 22-04-2016 YPTB_RS11290 bbfa85f7f62484ed0b87b463b434cad4 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.5E-111 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 YPTB_RS11290 bbfa85f7f62484ed0b87b463b434cad4 270 SUPERFAMILY SSF52540 1 269 1.58E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11290 bbfa85f7f62484ed0b87b463b434cad4 270 PANTHER PTHR13696:SF1 1 258 3.7E-96 T 22-04-2016 YPTB_RS11290 bbfa85f7f62484ed0b87b463b434cad4 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 8.1E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPTB_RS11290 bbfa85f7f62484ed0b87b463b434cad4 270 Gene3D G3DSA:3.40.50.300 1 248 5.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11290 bbfa85f7f62484ed0b87b463b434cad4 270 PANTHER PTHR13696 1 258 3.7E-96 T 22-04-2016 YPTB_RS11290 bbfa85f7f62484ed0b87b463b434cad4 270 PIRSF PIRSF003092 1 270 6.6E-99 T 22-04-2016 IPR025501 ATP binding protein MinD YPTB_RS14735 4e45ab29893a18a545e66a480a42821a 169 PANTHER PTHR30175 1 118 5.1E-57 T 22-04-2016 YPTB_RS14735 4e45ab29893a18a545e66a480a42821a 169 SUPERFAMILY SSF51261 12 167 4.36E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif YPTB_RS14735 4e45ab29893a18a545e66a480a42821a 169 Gene3D G3DSA:2.70.70.10 14 167 1.5E-60 T 22-04-2016 YPTB_RS14735 4e45ab29893a18a545e66a480a42821a 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS14735 4e45ab29893a18a545e66a480a42821a 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 3.2E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS14735 4e45ab29893a18a545e66a480a42821a 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.1E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS16805 58c3ffdd4f03bddc3c730ec581f6f9f3 285 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 59 151 5.8E-9 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YPTB_RS16805 58c3ffdd4f03bddc3c730ec581f6f9f3 285 SUPERFAMILY SSF54001 58 154 5.89E-28 T 22-04-2016 YPTB_RS16805 58c3ffdd4f03bddc3c730ec581f6f9f3 285 SUPERFAMILY SSF54001 196 232 5.89E-28 T 22-04-2016 YPTB_RS16805 58c3ffdd4f03bddc3c730ec581f6f9f3 285 Gene3D G3DSA:2.30.30.330 191 232 1.6E-24 T 22-04-2016 YPTB_RS16805 58c3ffdd4f03bddc3c730ec581f6f9f3 285 Gene3D G3DSA:2.30.30.330 58 150 1.6E-24 T 22-04-2016 YPTB_RS11320 df1d01a68248c0f480a5ae4cea3d9f6d 390 PANTHER PTHR23531 1 390 8.7E-151 T 22-04-2016 YPTB_RS11320 df1d01a68248c0f480a5ae4cea3d9f6d 390 Gene3D G3DSA:1.20.1250.20 7 187 2.4E-10 T 22-04-2016 YPTB_RS11320 df1d01a68248c0f480a5ae4cea3d9f6d 390 SUPERFAMILY SSF103473 7 388 2.49E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS11320 df1d01a68248c0f480a5ae4cea3d9f6d 390 Pfam PF07690 Major Facilitator Superfamily 10 287 1.4E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS11320 df1d01a68248c0f480a5ae4cea3d9f6d 390 Gene3D G3DSA:1.20.1250.20 215 383 1.7E-10 T 22-04-2016 YPTB_RS11320 df1d01a68248c0f480a5ae4cea3d9f6d 390 PANTHER PTHR23531:SF1 1 390 8.7E-151 T 22-04-2016 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 SMART SM00155 352 379 0.0025 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 SMART SM00155 133 159 0.0049 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 Pfam PF13091 PLD-like domain 257 401 2.9E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 Gene3D G3DSA:3.30.870.10 36 214 3.4E-15 T 22-04-2016 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 PANTHER PTHR12586 1 450 2.9E-284 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 PIRSF PIRSF000850 1 451 9.3E-262 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 PANTHER PTHR12586:SF3 1 450 2.9E-284 T 22-04-2016 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 SUPERFAMILY SSF56024 10 211 3.77E-27 T 22-04-2016 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 Gene3D G3DSA:3.30.870.10 254 394 2.4E-14 T 22-04-2016 YPTB_RS04745 5c1205d3fde467574b8f23b0206901b6 451 SUPERFAMILY SSF56024 254 393 3.11E-18 T 22-04-2016 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 Gene3D G3DSA:1.10.10.60 174 232 9.5E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 SMART SM00342 195 278 2.6E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 SUPERFAMILY SSF46689 232 284 1.97E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 PANTHER PTHR11019 11 286 2.8E-75 T 22-04-2016 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 7.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 7.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 Gene3D G3DSA:1.10.10.60 233 282 1.2E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 PANTHER PTHR11019:SF11 11 286 2.8E-75 T 22-04-2016 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 SUPERFAMILY SSF46689 181 224 3.76E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 Pfam PF12833 Helix-turn-helix domain 202 280 7.1E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS03070 fe4a91951a853016c072fc2d0caace64 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 SMART SM00382 368 555 2.0E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 PANTHER PTHR24221 1 582 0.0 T 22-04-2016 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 Pfam PF00664 ABC transporter transmembrane region 27 297 3.3E-60 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 Gene3D G3DSA:3.40.50.300 342 574 1.4E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 SUPERFAMILY SSF90123 14 327 1.24E-76 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 Gene3D G3DSA:1.20.1560.10 13 327 4.9E-72 T 22-04-2016 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 2.9E-264 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 PANTHER PTHR24221:SF188 1 582 0.0 T 22-04-2016 YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 SUPERFAMILY SSF52540 332 580 3.79E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07835 0f0910e0df9785cc95dc053b9e0b534f 582 Pfam PF00005 ABC transporter 359 509 7.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 SUPERFAMILY SSF48168 17 176 2.49E-61 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 Gene3D G3DSA:3.20.70.20 579 695 5.0E-55 T 22-04-2016 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 Gene3D G3DSA:3.20.70.20 352 515 5.0E-55 T 22-04-2016 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 Gene3D G3DSA:3.20.70.20 109 299 5.0E-55 T 22-04-2016 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 105 698 1.9E-159 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 Pfam PF02867 Ribonucleotide reductase, barrel domain 178 695 2.7E-141 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 253 272 1.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 428 451 1.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 579 606 1.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 384 395 1.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 495 518 1.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 467 489 1.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 PANTHER PTHR11573 30 702 5.6E-266 T 22-04-2016 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 568 590 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 Pfam PF08343 Ribonucleotide reductase N-terminal 18 99 6.5E-34 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 101 173 1.1E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 SUPERFAMILY SSF51998 177 700 2.75E-185 T 22-04-2016 YPTB_RS15990 fb29ab40bdfd466b382b5ce0c0843eb3 716 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 17 716 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS02480 45b540ebaed1f44287cd191e672f54e6 66 PANTHER PTHR38602:SF1 1 64 3.9E-25 T 22-04-2016 YPTB_RS02480 45b540ebaed1f44287cd191e672f54e6 66 PANTHER PTHR38602 1 64 3.9E-25 T 22-04-2016 YPTB_RS02480 45b540ebaed1f44287cd191e672f54e6 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 2.5E-22 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 SMART SM00448 1 111 1.0E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 PANTHER PTHR26402 1 227 9.2E-80 T 22-04-2016 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 PANTHER PTHR26402:SF292 1 227 9.2E-80 T 22-04-2016 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 Pfam PF00072 Response regulator receiver domain 3 111 4.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 SMART SM00862 150 226 8.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 SUPERFAMILY SSF46894 126 226 3.4E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 Gene3D G3DSA:1.10.10.10 130 226 2.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 SUPERFAMILY SSF52172 1 123 3.56E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 Gene3D G3DSA:3.40.50.2300 1 121 2.2E-34 T 22-04-2016 YPTB_RS14745 1d11ec06d6811a37e6ab5659e0aebc7a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 9.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 5.7E-301 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 SMART SM00642 247 596 8.8E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 4.2E-21 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Gene3D G3DSA:3.20.20.80 242 611 4.4E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Gene3D G3DSA:2.60.40.1180 623 723 1.4E-34 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 SUPERFAMILY SSF51011 623 726 8.51E-34 T 22-04-2016 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 PANTHER PTHR10357 49 725 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 PANTHER PTHR10357:SF158 49 725 0.0 T 22-04-2016 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.934 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 SUPERFAMILY SSF51445 233 620 5.07E-114 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 PIRSF PIRSF000463 6 727 2.1E-286 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Pfam PF00128 Alpha amylase, catalytic domain 273 347 4.9E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Gene3D G3DSA:2.60.40.10 14 105 6.7E-16 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Gene3D G3DSA:2.60.40.10 113 220 1.4E-41 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 SUPERFAMILY SSF81296 16 115 1.7E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 SUPERFAMILY SSF81296 117 223 1.28E-36 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS20480 ad5bc38dabbf698830bda429ee9e49e2 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 1.6E-25 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 SUPERFAMILY SSF118215 29 442 1.19E-98 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 Gene3D G3DSA:1.10.3860.10 23 449 1.8E-104 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PANTHER PTHR11958 18 459 5.3E-275 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 PANTHER PTHR11958:SF5 18 459 5.3E-275 T 22-04-2016 YPTB_RS12875 0a6a9c401988c09196f93b78ddb46d21 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 6.0E-105 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 Gene3D G3DSA:3.40.1190.20 1 322 3.3E-79 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 264 277 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 Pfam PF00294 pfkB family carbohydrate kinase 3 312 1.5E-41 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 PANTHER PTHR10584:SF194 1 344 7.0E-206 T 22-04-2016 YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 SUPERFAMILY SSF53613 1 319 1.87E-66 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 PANTHER PTHR10584 1 344 7.0E-206 T 22-04-2016 YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 1 320 6.0E-122 T 22-04-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 YPTB_RS05940 02c6664f4167fec5f5755b263019b7ff 625 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 315 622 2.0E-142 T 22-04-2016 IPR018659 Protein of unknown function DUF2090 YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 Pfam PF02082 Transcriptional regulator 2 82 1.1E-23 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 PANTHER PTHR33221 2 141 7.1E-84 T 22-04-2016 YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 SUPERFAMILY SSF46785 2 131 2.78E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 Gene3D G3DSA:1.10.10.10 2 132 1.1E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 129 1.0E-36 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 47.127 T 22-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 YPTB_RS02490 2cc48fa88d04779e8a7d158e65351eaa 141 PANTHER PTHR33221:SF4 2 141 7.1E-84 T 22-04-2016 YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 PANTHER PTHR10366:SF418 3 251 1.4E-92 T 22-04-2016 YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 PANTHER PTHR10366:SF418 277 320 1.4E-92 T 22-04-2016 YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 167 8.8E-22 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 SUPERFAMILY SSF51735 1 250 2.39E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 SUPERFAMILY SSF51735 289 319 2.39E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 PANTHER PTHR10366 3 251 1.4E-92 T 22-04-2016 YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 PANTHER PTHR10366 277 320 1.4E-92 T 22-04-2016 YPTB_RS10830 dfa8409378c6dec21708335f78617282 320 Gene3D G3DSA:3.40.50.720 1 237 4.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18550 31f7a69b39f6c2d1b79baf69d94de198 134 SUPERFAMILY SSF55298 4 133 4.87E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS18550 31f7a69b39f6c2d1b79baf69d94de198 134 PANTHER PTHR11803 1 134 4.0E-70 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS18550 31f7a69b39f6c2d1b79baf69d94de198 134 Pfam PF01042 Endoribonuclease L-PSP 18 132 1.3E-21 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPTB_RS18550 31f7a69b39f6c2d1b79baf69d94de198 134 Gene3D G3DSA:3.30.1330.40 1 134 1.5E-36 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPTB_RS18550 31f7a69b39f6c2d1b79baf69d94de198 134 PANTHER PTHR11803:SF9 1 134 4.0E-70 T 22-04-2016 YPTB_RS16910 3a3c07b3b39d99d07e4e3e0b10b15e8a 98 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 97 4.0E-31 T 22-04-2016 IPR031451 mRNA interferase MqsR GO:0009372|GO:0017148|GO:0042710 YPTB_RS13635 dbe53a600ba1ab9d4f33e4f78ccf0c61 326 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 13 318 1.2E-164 T 22-04-2016 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPTB_RS13635 dbe53a600ba1ab9d4f33e4f78ccf0c61 326 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 4 326 9.155 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 YPTB_RS13635 dbe53a600ba1ab9d4f33e4f78ccf0c61 326 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 20 324 6.3E-79 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 YPTB_RS13635 dbe53a600ba1ab9d4f33e4f78ccf0c61 326 Pfam PF01867 CRISPR associated protein Cas1 27 312 2.6E-27 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 2.8E-96 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 PANTHER PTHR39193:SF1 1 271 6.3E-142 T 22-04-2016 YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 PANTHER PTHR39193 1 271 6.3E-142 T 22-04-2016 YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 SUPERFAMILY SSF51182 4 253 1.29E-71 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 Gene3D G3DSA:2.60.120.10 16 121 7.1E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 Gene3D G3DSA:2.60.120.10 122 267 6.0E-68 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 Pfam PF04962 KduI/IolB family 7 264 1.0E-109 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPTB_RS05950 f502a891696354d10a3d191ab0ede689 271 PIRSF PIRSF036628 1 269 2.2E-112 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 372 3.9E-21 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 SUPERFAMILY SSF50022 18 160 6.29E-46 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 Pfam PF00355 Rieske [2Fe-2S] domain 46 134 1.8E-19 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 PANTHER PTHR21266 13 374 1.9E-110 T 22-04-2016 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 SUPERFAMILY SSF55961 160 371 8.63E-35 T 22-04-2016 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 PANTHER PTHR21266:SF2 13 374 1.9E-110 T 22-04-2016 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 22-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 Gene3D G3DSA:3.90.380.10 154 225 5.5E-13 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 YPTB_RS13740 82283192da8fec5cf061ea480ffb4f08 374 Gene3D G3DSA:2.102.10.10 45 153 4.1E-38 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS12800 518286dc81da5b21af433b91689c2e51 297 SUPERFAMILY SSF81345 5 266 2.62E-45 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS12800 518286dc81da5b21af433b91689c2e51 297 Pfam PF00950 ABC 3 transport family 14 268 1.8E-98 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YPTB_RS12800 518286dc81da5b21af433b91689c2e51 297 PANTHER PTHR30477:SF9 5 297 4.8E-213 T 22-04-2016 YPTB_RS12800 518286dc81da5b21af433b91689c2e51 297 PANTHER PTHR30477 5 297 4.8E-213 T 22-04-2016 YPTB_RS12800 518286dc81da5b21af433b91689c2e51 297 Gene3D G3DSA:1.10.3470.10 57 267 8.9E-12 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 SUPERFAMILY SSF51658 1 383 2.02E-78 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 PIRSF PIRSF016049 1 392 6.9E-178 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 Gene3D G3DSA:3.20.20.150 1 391 9.6E-151 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 PANTHER PTHR30387 1 397 6.4E-185 T 22-04-2016 YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.3E-155 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 397 225.375 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 PANTHER PTHR30387:SF2 1 397 6.4E-185 T 22-04-2016 YPTB_RS07280 624e914b290a9cf7a4415b9b2e861006 397 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 2.7E-211 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 Gene3D G3DSA:1.10.3720.10 291 524 2.0E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 Gene3D G3DSA:1.10.3720.10 31 254 5.6E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 PANTHER PTHR30193 1 270 1.8E-95 T 22-04-2016 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 254 5.4E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 345 524 1.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 PANTHER PTHR30193:SF3 1 270 1.8E-95 T 22-04-2016 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 SUPERFAMILY SSF161098 286 519 1.68E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14535 e9ea3797628c6d5da1adba182e4f68ad 528 SUPERFAMILY SSF161098 29 254 8.18E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 PANTHER PTHR21000:SF9 1 272 0.0 T 22-04-2016 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 PANTHER PTHR21000:SF9 311 638 0.0 T 22-04-2016 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 540 551 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 Pfam PF00920 Dehydratase family 67 633 6.1E-154 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 SUPERFAMILY SSF143975 306 453 1.44E-137 T 22-04-2016 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 SUPERFAMILY SSF143975 1 270 1.44E-137 T 22-04-2016 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 PANTHER PTHR21000 1 272 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 PANTHER PTHR21000 311 638 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS13920 366817dc57f9882a375eefea66532a07 638 SUPERFAMILY SSF52016 454 635 4.16E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB_RS02035 e604c346a7af70b73720e9813384127d 319 PANTHER PTHR32308 6 319 4.8E-188 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPTB_RS02035 e604c346a7af70b73720e9813384127d 319 PANTHER PTHR32308:SF3 6 319 4.8E-188 T 22-04-2016 YPTB_RS02035 e604c346a7af70b73720e9813384127d 319 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 6 300 4.4E-107 T 22-04-2016 YPTB_RS02035 e604c346a7af70b73720e9813384127d 319 Gene3D G3DSA:3.20.20.60 9 250 6.9E-32 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS02035 e604c346a7af70b73720e9813384127d 319 PIRSF PIRSF015582 1 310 3.0E-66 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPTB_RS02035 e604c346a7af70b73720e9813384127d 319 SUPERFAMILY SSF51621 8 250 4.6E-29 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS20670 d49c34f7b4861235a2e7d3f096d1b913 264 Pfam PF11692 Protein of unknown function (DUF3289) 1 256 3.5E-105 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 YPTB_RS20670 d49c34f7b4861235a2e7d3f096d1b913 264 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 1 256 1.1E-132 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 PANTHER PTHR34156:SF2 2 316 1.7E-256 T 22-04-2016 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 111 176 3.3E-26 T 22-04-2016 IPR025543 Dodecin-like YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 251 317 2.1E-25 T 22-04-2016 IPR025543 Dodecin-like YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 25 91 9.5E-26 T 22-04-2016 IPR025543 Dodecin-like YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 241 317 2.62E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 3 94 3.92E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 109 179 3.4E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 PANTHER PTHR34156 2 316 1.7E-256 T 22-04-2016 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 7.2E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 6.4E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 261 317 2.3E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS12150 220822f690122c33b3a758668574b1d6 317 PIRSF PIRSF014774 1 317 3.0E-185 T 22-04-2016 IPR025539 YdgH protein YPTB_RS02250 065c335552de16ac31456b58aeb0aa05 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 8 342 1.2E-97 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YPTB_RS02250 065c335552de16ac31456b58aeb0aa05 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 344 2.7E-227 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YPTB_RS02250 065c335552de16ac31456b58aeb0aa05 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 42.992 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YPTB_RS03135 3d58b21e9d10fbe04a688c5583be9c9f 337 Gene3D G3DSA:3.40.50.1360 83 336 3.1E-68 T 22-04-2016 YPTB_RS03135 3d58b21e9d10fbe04a688c5583be9c9f 337 PANTHER PTHR34294:SF1 19 334 2.3E-137 T 22-04-2016 YPTB_RS03135 3d58b21e9d10fbe04a688c5583be9c9f 337 Gene3D G3DSA:1.10.10.10 50 82 3.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03135 3d58b21e9d10fbe04a688c5583be9c9f 337 SUPERFAMILY SSF100950 86 336 1.81E-58 T 22-04-2016 YPTB_RS03135 3d58b21e9d10fbe04a688c5583be9c9f 337 PANTHER PTHR34294 19 334 2.3E-137 T 22-04-2016 YPTB_RS03135 3d58b21e9d10fbe04a688c5583be9c9f 337 Pfam PF04198 Putative sugar-binding domain 86 335 6.0E-68 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 PIRSF PIRSF006728 1 385 3.2E-113 T 22-04-2016 IPR008135 Competence-induced protein CinA YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 PANTHER PTHR13939 2 387 6.3E-216 T 22-04-2016 YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 Pfam PF00994 Probable molybdopterin binding domain 6 170 1.5E-31 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 SMART SM00852 5 172 1.0E-32 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 PANTHER PTHR13939:SF3 2 387 6.3E-216 T 22-04-2016 YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 396 4.5E-117 T 22-04-2016 IPR008135 Competence-induced protein CinA YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 Gene3D G3DSA:3.40.980.10 2 197 7.9E-30 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 SUPERFAMILY SSF53218 1 203 5.89E-37 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 3.0E-31 T 22-04-2016 IPR001453 MoaB/Mog domain YPTB_RS06905 77a1f259386ae9fee12a5e76d02889c0 397 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 397 113.852 T 22-04-2016 IPR008135 Competence-induced protein CinA YPTB_RS04540 a8916df1f6d8b6172c6ef7aee76ebb8e 314 SUPERFAMILY SSF46785 13 55 8.71E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04540 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Pfam PF04198 Putative sugar-binding domain 64 314 5.2E-62 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPTB_RS04540 a8916df1f6d8b6172c6ef7aee76ebb8e 314 SUPERFAMILY SSF100950 64 314 1.17E-65 T 22-04-2016 YPTB_RS04540 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Gene3D G3DSA:3.40.50.1360 57 314 2.0E-74 T 22-04-2016 YPTB_RS04540 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Gene3D G3DSA:1.10.10.10 14 52 4.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04540 a8916df1f6d8b6172c6ef7aee76ebb8e 314 PANTHER PTHR34294 6 314 1.8E-74 T 22-04-2016 YPTB_RS04540 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Pfam PF01047 MarR family 14 51 9.5E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 Gene3D G3DSA:2.60.40.360 58 181 1.6E-37 T 22-04-2016 IPR008962 PapD-like YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 PANTHER PTHR30251:SF7 28 272 2.1E-133 T 22-04-2016 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 PANTHER PTHR30251 28 272 2.1E-133 T 22-04-2016 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 135 152 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 Gene3D G3DSA:2.60.40.1070 190 267 5.2E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 PRINTS PR00969 Pili chaperone signature 202 217 1.1E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 PRINTS PR00969 Pili chaperone signature 58 67 1.1E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 PRINTS PR00969 Pili chaperone signature 136 153 1.1E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 PRINTS PR00969 Pili chaperone signature 163 178 1.1E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 PRINTS PR00969 Pili chaperone signature 107 128 1.1E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 207 265 7.1E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 58 181 3.2E-39 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 SUPERFAMILY SSF49354 52 181 4.45E-37 T 22-04-2016 IPR008962 PapD-like YPTB_RS00950 0ea6360e5d9f6f89ec23d049d02e6b83 272 SUPERFAMILY SSF49584 175 267 9.03E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS17270 2a22188b1de9f97ca68ae2f98fe16467 198 Gene3D G3DSA:3.40.50.10420 11 197 8.6E-62 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain YPTB_RS17270 2a22188b1de9f97ca68ae2f98fe16467 198 PANTHER PTHR23407:SF1 3 198 3.6E-75 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPTB_RS17270 2a22188b1de9f97ca68ae2f98fe16467 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 192 2.1E-52 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPTB_RS17270 2a22188b1de9f97ca68ae2f98fe16467 198 PIRSF PIRSF006806 7 195 4.2E-42 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPTB_RS17270 2a22188b1de9f97ca68ae2f98fe16467 198 SUPERFAMILY SSF100950 10 198 9.07E-59 T 22-04-2016 YPTB_RS17270 2a22188b1de9f97ca68ae2f98fe16467 198 PANTHER PTHR23407 3 198 3.6E-75 T 22-04-2016 YPTB_RS17270 2a22188b1de9f97ca68ae2f98fe16467 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 6.5E-57 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPTB_RS09280 9bbc8b7648f5032f70d159d498b438b2 331 Gene3D G3DSA:3.40.50.2300 148 270 1.0E-24 T 22-04-2016 YPTB_RS09280 9bbc8b7648f5032f70d159d498b438b2 331 Gene3D G3DSA:3.40.50.2300 28 147 1.2E-21 T 22-04-2016 YPTB_RS09280 9bbc8b7648f5032f70d159d498b438b2 331 PANTHER PTHR32196 1 306 4.0E-161 T 22-04-2016 YPTB_RS09280 9bbc8b7648f5032f70d159d498b438b2 331 Pfam PF13407 Periplasmic binding protein domain 29 284 4.2E-45 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS09280 9bbc8b7648f5032f70d159d498b438b2 331 SUPERFAMILY SSF53822 26 331 3.3E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS09280 9bbc8b7648f5032f70d159d498b438b2 331 PANTHER PTHR32196:SF36 1 306 4.0E-161 T 22-04-2016 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072:SF37 1 97 1.9E-94 T 22-04-2016 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072:SF37 147 188 1.9E-94 T 22-04-2016 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.185 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 Gene3D G3DSA:2.60.300.12 1 97 8.3E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.4E-100 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072 1 97 1.9E-94 T 22-04-2016 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072 147 188 1.9E-94 T 22-04-2016 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 6.0E-28 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 Pfam PF01106 NifU-like domain 111 177 7.9E-20 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 SUPERFAMILY SSF117916 95 184 1.26E-23 T 22-04-2016 YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 SUPERFAMILY SSF89360 1 97 1.73E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS20400 6293ac96e9168f548dbd8f9f9e649b86 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 1.8E-12 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS19325 a4e495a6c887717aaa17175079f0043b 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 7.6E-242 T 22-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 YPTB_RS19325 a4e495a6c887717aaa17175079f0043b 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS19325 a4e495a6c887717aaa17175079f0043b 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 4.0E-107 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS19325 a4e495a6c887717aaa17175079f0043b 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS19325 a4e495a6c887717aaa17175079f0043b 484 Pfam PF00474 Sodium:solute symporter family 36 432 6.7E-131 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS19325 a4e495a6c887717aaa17175079f0043b 484 PANTHER PTHR11819 2 477 2.0E-301 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS19325 a4e495a6c887717aaa17175079f0043b 484 PANTHER PTHR11819:SF125 2 477 2.0E-301 T 22-04-2016 YPTB_RS07105 2dccdb4d893c145932fd3180b7abacde 151 Pfam PF07409 Phage protein GP46 30 136 3.4E-41 T 22-04-2016 IPR010877 Bacteriophage Mu, Gp46 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 PANTHER PTHR32331:SF3 7 721 0.0 T 22-04-2016 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 Pfam PF11842 Domain of unknown function (DUF3362) 590 740 2.5E-41 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 28 640 2.5E-266 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 27 689 49.069 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 Gene3D G3DSA:3.80.30.20 370 636 7.8E-47 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 SUPERFAMILY SSF102114 361 436 1.7E-10 T 22-04-2016 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 SUPERFAMILY SSF102114 466 649 1.7E-10 T 22-04-2016 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 Pfam PF04055 Radical SAM superfamily 376 581 1.5E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 SMART SM00729 372 622 2.0E-6 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 Pfam PF08497 Radical SAM N-terminal 28 375 4.8E-146 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 376 396 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 YPTB_RS18315 3d35479765d161f858ba5185ed497261 787 PANTHER PTHR32331 7 721 0.0 T 22-04-2016 YPTB_RS11040 62804be4777affca3052b1c14c6e6d11 291 PANTHER PTHR23344:SF2 24 291 5.9E-150 T 22-04-2016 YPTB_RS11040 62804be4777affca3052b1c14c6e6d11 291 Gene3D G3DSA:3.20.20.190 18 290 3.5E-47 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS11040 62804be4777affca3052b1c14c6e6d11 291 PANTHER PTHR23344 24 291 5.9E-150 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPTB_RS11040 62804be4777affca3052b1c14c6e6d11 291 SUPERFAMILY SSF51695 24 290 4.71E-49 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS11040 62804be4777affca3052b1c14c6e6d11 291 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 29 285 4.7E-18 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPTB_RS10935 c3e251cd0c00fba423259db0596e1f43 221 PANTHER PTHR39201 37 221 2.0E-77 T 22-04-2016 YPTB_RS10935 c3e251cd0c00fba423259db0596e1f43 221 SUPERFAMILY SSF52218 36 217 2.88E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS10935 c3e251cd0c00fba423259db0596e1f43 221 Pfam PF12682 Flavodoxin 71 205 2.3E-24 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPTB_RS10935 c3e251cd0c00fba423259db0596e1f43 221 PANTHER PTHR39201:SF1 37 221 2.0E-77 T 22-04-2016 YPTB_RS10935 c3e251cd0c00fba423259db0596e1f43 221 Gene3D G3DSA:3.40.50.360 37 217 7.6E-25 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 Gene3D G3DSA:2.40.50.140 983 1078 5.7E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF02811 PHP domain 8 171 9.6E-44 T 22-04-2016 IPR004013 PHP domain GO:0003824 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 734 1.3E-177 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 Gene3D G3DSA:3.20.20.140 6 256 2.4E-21 T 22-04-2016 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 PANTHER PTHR32294 2 1160 0.0 T 22-04-2016 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 SUPERFAMILY SSF89550 6 263 6.47E-18 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 PANTHER PTHR32294:SF0 2 1160 0.0 T 22-04-2016 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 Gene3D G3DSA:1.10.150.280 836 882 5.0E-6 T 22-04-2016 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 6.1E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 SMART SM00481 7 74 1.4E-29 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1071 1.6E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPTB_RS16180 580f2954006a6317a90a88dcfb22db5c 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 1 121 2.1E-31 T 22-04-2016 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.0E-40 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 PANTHER PTHR30478 2 366 8.7E-149 T 22-04-2016 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 245 366 3.14E-37 T 22-04-2016 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 SMART SM00480 17 362 1.7E-165 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 249 366 3.8E-38 T 22-04-2016 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 6.8E-44 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 PIRSF PIRSF000804 1 366 5.0E-116 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 125 244 3.62E-31 T 22-04-2016 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.9E-38 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 122 248 8.9E-40 T 22-04-2016 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.1E-111 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS21295 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 1 121 1.77E-26 T 22-04-2016 YPTB_RS20680 59d1c40ebb631275bc9eaba28ba679b2 360 PANTHER PTHR30213 21 360 1.3E-104 T 22-04-2016 YPTB_RS20680 59d1c40ebb631275bc9eaba28ba679b2 360 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 49 321 4.9E-121 T 22-04-2016 IPR005274 Inner membrane protein YhjD YPTB_RS20680 59d1c40ebb631275bc9eaba28ba679b2 360 PANTHER PTHR30213:SF1 21 360 1.3E-104 T 22-04-2016 YPTB_RS20680 59d1c40ebb631275bc9eaba28ba679b2 360 Pfam PF03631 Virulence factor BrkB 63 320 1.4E-45 T 22-04-2016 IPR017039 Virulence factor BrkB YPTB_RS14775 c628b5d42ba610fc64de443d99bf781d 406 SUPERFAMILY SSF53092 6 176 1.01E-14 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPTB_RS14775 c628b5d42ba610fc64de443d99bf781d 406 Gene3D G3DSA:3.90.230.10 178 403 1.0E-47 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS14775 c628b5d42ba610fc64de443d99bf781d 406 SUPERFAMILY SSF55920 175 403 6.41E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS14775 c628b5d42ba610fc64de443d99bf781d 406 Gene3D G3DSA:3.40.350.10 14 176 3.8E-11 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTB_RS14775 c628b5d42ba610fc64de443d99bf781d 406 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 178 2.4E-17 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 YPTB_RS14775 c628b5d42ba610fc64de443d99bf781d 406 PANTHER PTHR10804 159 403 6.8E-44 T 22-04-2016 YPTB_RS14775 c628b5d42ba610fc64de443d99bf781d 406 Pfam PF00557 Metallopeptidase family M24 186 388 1.2E-34 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 SUPERFAMILY SSF53901 230 425 1.25E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 PANTHER PTHR11712 80 425 3.0E-114 T 22-04-2016 YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 PANTHER PTHR11712 1 61 3.0E-114 T 22-04-2016 YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 Gene3D G3DSA:3.40.47.10 279 425 5.2E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 382 6.6E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 SMART SM00825 Beta-ketoacyl synthase 6 427 1.1E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 SUPERFAMILY SSF53901 4 267 8.12E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 262 8.3E-26 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB_RS08125 13e1fa30c3c4e3e250def7e123dcb1e5 427 Gene3D G3DSA:3.40.47.10 2 275 4.7E-40 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 SUPERFAMILY SSF56784 1 265 7.02E-69 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 Gene3D G3DSA:3.40.50.1000 1 72 4.1E-54 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 Gene3D G3DSA:3.40.50.1000 177 265 4.1E-54 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 PANTHER PTHR10000 1 266 5.7E-146 T 22-04-2016 YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.3E-62 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.3E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 PANTHER PTHR10000:SF20 1 266 5.7E-146 T 22-04-2016 YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 2.8E-61 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS01235 56eb2b984b18f7f7180016db0bb4cf55 269 Gene3D G3DSA:3.30.1240.10 82 176 5.3E-22 T 22-04-2016 YPTB_RS06660 4fad80d31b6b84db23e333021bca3b43 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 7.0E-186 T 22-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 YPTB_RS06660 4fad80d31b6b84db23e333021bca3b43 418 Gene3D G3DSA:1.20.1250.20 201 407 1.1E-23 T 22-04-2016 YPTB_RS06660 4fad80d31b6b84db23e333021bca3b43 418 Gene3D G3DSA:1.20.1250.20 8 190 1.8E-9 T 22-04-2016 YPTB_RS06660 4fad80d31b6b84db23e333021bca3b43 418 PANTHER PTHR23522:SF4 1 418 1.2E-225 T 22-04-2016 YPTB_RS06660 4fad80d31b6b84db23e333021bca3b43 418 SUPERFAMILY SSF103473 9 405 2.09E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS06660 4fad80d31b6b84db23e333021bca3b43 418 Pfam PF03825 Nucleoside H+ symporter 1 406 3.1E-159 T 22-04-2016 YPTB_RS06660 4fad80d31b6b84db23e333021bca3b43 418 PANTHER PTHR23522 1 418 1.2E-225 T 22-04-2016 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 Gene3D G3DSA:3.40.190.10 3 139 4.4E-52 T 22-04-2016 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 Gene3D G3DSA:3.30.70.120 226 299 8.3E-31 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 4.8E-48 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 SUPERFAMILY SSF54913 226 298 1.56E-21 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 205 298 9.5E-33 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 PANTHER PTHR21403:SF0 3 299 5.3E-134 T 22-04-2016 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.725 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.3E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 SUPERFAMILY SSF53850 6 224 1.78E-70 T 22-04-2016 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 PANTHER PTHR21403 3 299 5.3E-134 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPTB_RS08585 b24ddaf28bca15f0bd5ab6147a42608c 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.1E-56 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 35 281 1.5E-103 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 35 280 8.5E-89 T 22-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 Pfam PF01048 Phosphorylase superfamily 36 282 1.8E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 PANTHER PTHR11904:SF9 9 282 1.7E-124 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 PANTHER PTHR11904 9 282 1.7E-124 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 Gene3D G3DSA:3.40.50.1580 20 282 7.1E-92 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 PIRSF PIRSF000477 7 284 1.3E-111 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 SUPERFAMILY SSF53167 20 283 1.57E-81 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS06655 ccf408a5e590a0f4e672fa78c72c9a92 287 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 35 282 4.6E-165 T 22-04-2016 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00119|UniPathway: UPA00606 YPTB_RS04290 579129eaafb4296579db84cd33f26a48 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04290 579129eaafb4296579db84cd33f26a48 349 SUPERFAMILY SSF55120 3 339 2.59E-106 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04290 579129eaafb4296579db84cd33f26a48 349 PANTHER PTHR13326 1 348 7.2E-103 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04290 579129eaafb4296579db84cd33f26a48 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.522 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04290 579129eaafb4296579db84cd33f26a48 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 189 336 2.4E-19 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04290 579129eaafb4296579db84cd33f26a48 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 166 1.4E-41 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS04290 579129eaafb4296579db84cd33f26a48 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 340 3.6E-80 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS00365 e6f77053ef1b4653bb800c7edd500469 321 PANTHER PTHR30160 1 300 3.7E-169 T 22-04-2016 YPTB_RS00365 e6f77053ef1b4653bb800c7edd500469 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 313 2.9E-71 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPTB_RS00365 e6f77053ef1b4653bb800c7edd500469 321 SUPERFAMILY SSF53756 1 320 2.51E-74 T 22-04-2016 YPTB_RS00365 e6f77053ef1b4653bb800c7edd500469 321 PANTHER PTHR30160:SF8 1 300 3.7E-169 T 22-04-2016 YPTB_RS00365 e6f77053ef1b4653bb800c7edd500469 321 Gene3D G3DSA:3.40.50.2000 1 158 1.7E-28 T 22-04-2016 YPTB_RS00365 e6f77053ef1b4653bb800c7edd500469 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 319 2.1E-125 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YPTB_RS00365 e6f77053ef1b4653bb800c7edd500469 321 Gene3D G3DSA:3.40.50.2000 165 320 3.3E-37 T 22-04-2016 YPTB_RS17200 496e15cb0b679ef7cd711179aafe063a 165 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 3 159 6.3E-68 T 22-04-2016 IPR018681 Protein of unknown function DUF2165, transmembrane YPTB_RS17670 076e0e0ebf8dca9ecbc0aa07446cbfe3 316 SMART SM01006 147 194 6.8E-17 T 22-04-2016 IPR019432 Siderophore biosynthesis protein, conserved domain YPTB_RS17670 076e0e0ebf8dca9ecbc0aa07446cbfe3 316 PANTHER PTHR31438:SF5 1 316 1.6E-257 T 22-04-2016 YPTB_RS17670 076e0e0ebf8dca9ecbc0aa07446cbfe3 316 Gene3D G3DSA:3.40.630.30 124 312 2.1E-65 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS17670 076e0e0ebf8dca9ecbc0aa07446cbfe3 316 Pfam PF13523 Acetyltransferase (GNAT) domain 151 295 3.3E-49 T 22-04-2016 YPTB_RS17670 076e0e0ebf8dca9ecbc0aa07446cbfe3 316 PANTHER PTHR31438 1 316 1.6E-257 T 22-04-2016 YPTB_RS17670 076e0e0ebf8dca9ecbc0aa07446cbfe3 316 SUPERFAMILY SSF55729 114 307 4.64E-55 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS04845 3b68ae8e722d97380f49e8e1b8110126 441 Pfam PF00266 Aminotransferase class-V 20 356 1.2E-23 T 22-04-2016 IPR000192 Aminotransferase class V domain YPTB_RS04845 3b68ae8e722d97380f49e8e1b8110126 441 SUPERFAMILY SSF53383 10 395 1.53E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS04845 3b68ae8e722d97380f49e8e1b8110126 441 PANTHER PTHR21152 247 412 3.6E-87 T 22-04-2016 YPTB_RS04845 3b68ae8e722d97380f49e8e1b8110126 441 PANTHER PTHR21152 1 231 3.6E-87 T 22-04-2016 YPTB_RS04845 3b68ae8e722d97380f49e8e1b8110126 441 PIRSF PIRSF000524 11 416 4.8E-103 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 YPTB_RS04845 3b68ae8e722d97380f49e8e1b8110126 441 Gene3D G3DSA:3.40.640.10 29 288 1.1E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS04845 3b68ae8e722d97380f49e8e1b8110126 441 Gene3D G3DSA:3.90.1150.10 289 396 3.5E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 PANTHER PTHR22573 18 547 2.0E-298 T 22-04-2016 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 SUPERFAMILY SSF53738 305 446 9.03E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 SUPERFAMILY SSF55957 432 543 5.49E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 488 538 1.4E-7 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 5.8E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 5.2E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 PANTHER PTHR22573:SF52 18 547 2.0E-298 T 22-04-2016 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Gene3D G3DSA:3.40.120.10 318 441 3.4E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Gene3D G3DSA:3.30.310.50 466 544 2.1E-29 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Gene3D G3DSA:3.40.120.10 29 225 2.7E-60 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 6.3E-36 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 SUPERFAMILY SSF53738 209 317 9.53E-9 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 Gene3D G3DSA:3.40.120.10 226 316 2.9E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS15805 6bd3c366db60b72fe2d9a785797d8530 547 SUPERFAMILY SSF53738 26 235 2.59E-51 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS02090 6c206ac874ce80773d91066e37e8f137 212 Pfam PF06551 Protein of unknown function (DUF1120) 30 98 6.6E-8 T 22-04-2016 IPR010546 Protein of unknown function DUF1120 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 SUPERFAMILY SSF52440 2 122 1.73E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 183.522 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 Gene3D G3DSA:3.30.470.20 192 296 3.0E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 PANTHER PTHR21621:SF4 1 318 3.4E-173 T 22-04-2016 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.5E-80 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 4.5E-138 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 7.2E-48 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 PANTHER PTHR21621 1 318 3.4E-173 T 22-04-2016 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 Gene3D G3DSA:3.40.50.20 2 129 7.6E-57 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 Gene3D G3DSA:3.30.1490.20 137 191 1.8E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS17375 5b1c9bbaa676c6e651fac7b190323325 319 SUPERFAMILY SSF56059 123 313 6.36E-58 T 22-04-2016 YPTB_RS05195 8302d6af3ff593e682b6e7f59ab412bb 156 Gene3D G3DSA:3.40.50.960 2 152 4.1E-63 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS05195 8302d6af3ff593e682b6e7f59ab412bb 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.894 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS05195 8302d6af3ff593e682b6e7f59ab412bb 156 PANTHER PTHR21058 1 155 3.5E-77 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS05195 8302d6af3ff593e682b6e7f59ab412bb 156 SUPERFAMILY SSF52121 3 154 3.53E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS05195 8302d6af3ff593e682b6e7f59ab412bb 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.6E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS05195 8302d6af3ff593e682b6e7f59ab412bb 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.1E-58 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPTB_RS02935 55fabe3b15219250f1bfbd753db5e332 208 PIRSF PIRSF020680 1 208 5.8E-51 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YPTB_RS02935 55fabe3b15219250f1bfbd753db5e332 208 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 204 2.7E-48 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YPTB_RS02935 55fabe3b15219250f1bfbd753db5e332 208 SUPERFAMILY SSF159709 13 207 1.31E-54 T 22-04-2016 YPTB_RS02935 55fabe3b15219250f1bfbd753db5e332 208 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 206 2.3E-65 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YPTB_RS06220 9e764e708f78d6f974a5f4046fa7e73f 148 Gene3D G3DSA:1.10.10.10 2 82 3.7E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06220 9e764e708f78d6f974a5f4046fa7e73f 148 SUPERFAMILY SSF46785 5 134 2.15E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS06220 9e764e708f78d6f974a5f4046fa7e73f 148 PANTHER PTHR33202 1 146 4.8E-47 T 22-04-2016 YPTB_RS06220 9e764e708f78d6f974a5f4046fa7e73f 148 Pfam PF01475 Ferric uptake regulator family 11 130 2.9E-47 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YPTB_RS02510 f4c2c050243932dd6271645fd1f134dd 103 Gene3D G3DSA:3.30.1660.10 38 103 4.4E-19 T 22-04-2016 IPR025543 Dodecin-like YPTB_RS02510 f4c2c050243932dd6271645fd1f134dd 103 Pfam PF07338 Protein of unknown function (DUF1471) 48 103 1.2E-16 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS02510 f4c2c050243932dd6271645fd1f134dd 103 SUPERFAMILY SSF159871 5 103 1.11E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS18975 1a419096c1a4c706086f70a326962ff3 171 Gene3D G3DSA:2.30.30.220 3 111 2.3E-52 T 22-04-2016 IPR007481 Stringent starvation protein B YPTB_RS18975 1a419096c1a4c706086f70a326962ff3 171 Pfam PF04386 Stringent starvation protein B 9 171 1.3E-43 T 22-04-2016 IPR007481 Stringent starvation protein B YPTB_RS18975 1a419096c1a4c706086f70a326962ff3 171 PANTHER PTHR37486:SF1 2 171 2.0E-90 T 22-04-2016 YPTB_RS18975 1a419096c1a4c706086f70a326962ff3 171 SUPERFAMILY SSF101738 3 115 2.35E-48 T 22-04-2016 IPR007481 Stringent starvation protein B YPTB_RS18975 1a419096c1a4c706086f70a326962ff3 171 PANTHER PTHR37486 2 171 2.0E-90 T 22-04-2016 YPTB_RS18975 1a419096c1a4c706086f70a326962ff3 171 PIRSF PIRSF005276 3 171 3.6E-63 T 22-04-2016 IPR007481 Stringent starvation protein B YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 24 33 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 100 117 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 70 91 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 123 138 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 159 174 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 PANTHER PTHR30251 1 231 1.6E-143 T 22-04-2016 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 165 222 1.9E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 5.4E-40 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 Gene3D G3DSA:2.60.40.360 24 141 5.6E-46 T 22-04-2016 IPR008962 PapD-like YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 SUPERFAMILY SSF49354 24 141 3.92E-40 T 22-04-2016 IPR008962 PapD-like YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 PANTHER PTHR30251:SF6 1 231 1.6E-143 T 22-04-2016 YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 SUPERFAMILY SSF49584 148 234 3.92E-23 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS18170 73e810269fa608afe3a6d9cf82bcea7d 239 Gene3D G3DSA:2.60.40.1070 147 234 1.2E-27 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS00460 daa2a046b81ff4fa049b4f90e8d74b16 319 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 20 317 9.9E-68 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 YPTB_RS00460 daa2a046b81ff4fa049b4f90e8d74b16 319 Pfam PF04754 Putative transposase, YhgA-like 19 220 5.7E-86 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like YPTB_RS00460 daa2a046b81ff4fa049b4f90e8d74b16 319 PANTHER PTHR34611:SF3 13 319 1.8E-208 T 22-04-2016 YPTB_RS00460 daa2a046b81ff4fa049b4f90e8d74b16 319 PANTHER PTHR34611 13 319 1.8E-208 T 22-04-2016 YPTB_RS03455 f1947a172849d381143cc24849813d53 299 SUPERFAMILY SSF46785 1 87 2.72E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03455 f1947a172849d381143cc24849813d53 299 PANTHER PTHR30293 4 299 2.4E-226 T 22-04-2016 YPTB_RS03455 f1947a172849d381143cc24849813d53 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS03455 f1947a172849d381143cc24849813d53 299 Gene3D G3DSA:3.40.190.10 99 228 1.6E-9 T 22-04-2016 YPTB_RS03455 f1947a172849d381143cc24849813d53 299 Gene3D G3DSA:1.10.10.10 5 85 1.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03455 f1947a172849d381143cc24849813d53 299 PANTHER PTHR30293:SF2 4 299 2.4E-226 T 22-04-2016 YPTB_RS03455 f1947a172849d381143cc24849813d53 299 Pfam PF03466 LysR substrate binding domain 98 288 5.2E-12 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS03455 f1947a172849d381143cc24849813d53 299 SUPERFAMILY SSF53850 92 290 2.95E-26 T 22-04-2016 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 Gene3D G3DSA:3.10.420.10 2 147 6.3E-64 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 SUPERFAMILY SSF54611 2 141 2.4E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.658 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.5E-57 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 PANTHER PTHR36918:SF1 6 156 1.7E-91 T 22-04-2016 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 PANTHER PTHR36918 6 156 1.7E-91 T 22-04-2016 YPTB_RS00415 75b036a4a4126578e953652e051d25b3 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 146 3.5E-69 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPTB_RS13670 0bc75b333833ffd6aa69d07e00ff22de 291 PANTHER PTHR32243 3 291 7.4E-169 T 22-04-2016 YPTB_RS13670 0bc75b333833ffd6aa69d07e00ff22de 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 278 1.4E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13670 0bc75b333833ffd6aa69d07e00ff22de 291 PANTHER PTHR32243:SF27 3 291 7.4E-169 T 22-04-2016 YPTB_RS13670 0bc75b333833ffd6aa69d07e00ff22de 291 SUPERFAMILY SSF161098 53 277 9.81E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13670 0bc75b333833ffd6aa69d07e00ff22de 291 Gene3D G3DSA:1.10.3720.10 59 287 9.2E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11720 c05657f5b446b40adc9977c9af1cefa4 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 47.897 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPTB_RS11720 c05657f5b446b40adc9977c9af1cefa4 196 Pfam PF00925 GTP cyclohydrolase II 4 170 9.9E-67 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPTB_RS11720 c05657f5b446b40adc9977c9af1cefa4 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.1E-92 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPTB_RS11720 c05657f5b446b40adc9977c9af1cefa4 196 PANTHER PTHR21327:SF14 1 196 3.0E-146 T 22-04-2016 YPTB_RS11720 c05657f5b446b40adc9977c9af1cefa4 196 SUPERFAMILY SSF142695 3 173 3.66E-65 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPTB_RS11720 c05657f5b446b40adc9977c9af1cefa4 196 PANTHER PTHR21327 1 196 3.0E-146 T 22-04-2016 YPTB_RS18180 3227e8a04d1d7c2c9df62d8bb4ed7096 176 Gene3D G3DSA:2.60.40.1090 29 176 1.0E-42 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS18180 3227e8a04d1d7c2c9df62d8bb4ed7096 176 PANTHER PTHR33420 5 176 4.6E-87 T 22-04-2016 YPTB_RS18180 3227e8a04d1d7c2c9df62d8bb4ed7096 176 SUPERFAMILY SSF49401 30 176 2.44E-36 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS18180 3227e8a04d1d7c2c9df62d8bb4ed7096 176 PANTHER PTHR33420:SF7 5 176 4.6E-87 T 22-04-2016 YPTB_RS18180 3227e8a04d1d7c2c9df62d8bb4ed7096 176 Pfam PF00419 Fimbrial protein 32 175 6.0E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 Pfam PF00248 Aldo/keto reductase family 18 260 7.2E-48 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 PANTHER PTHR11732 3 276 2.1E-133 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 PIRSF PIRSF000097 1 270 5.7E-92 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 SUPERFAMILY SSF51430 1 267 1.83E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS18310 1b66080192eec31bf79a5abb3e226a0d 277 Gene3D G3DSA:3.20.20.100 3 272 2.1E-101 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS11140 b0c5ac26f0bde45c4a8dfa6f972c87a3 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 245 38.556 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YPTB_RS11140 b0c5ac26f0bde45c4a8dfa6f972c87a3 254 SUPERFAMILY SSF110395 3 244 8.76E-76 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 YPTB_RS11140 b0c5ac26f0bde45c4a8dfa6f972c87a3 254 PANTHER PTHR12598:SF0 1 254 2.6E-109 T 22-04-2016 YPTB_RS11140 b0c5ac26f0bde45c4a8dfa6f972c87a3 254 Gene3D G3DSA:3.20.20.380 1 244 3.9E-90 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 YPTB_RS11140 b0c5ac26f0bde45c4a8dfa6f972c87a3 254 PANTHER PTHR12598 1 254 2.6E-109 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YPTB_RS11140 b0c5ac26f0bde45c4a8dfa6f972c87a3 254 Pfam PF03932 CutC family 3 201 1.9E-73 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YPTB_RS02970 f521b1fba1dcb1ea7874e059c6da3535 278 SUPERFAMILY SSF161098 72 257 1.27E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02970 f521b1fba1dcb1ea7874e059c6da3535 278 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 53 1.5E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB_RS02970 f521b1fba1dcb1ea7874e059c6da3535 278 Gene3D G3DSA:1.10.3720.10 68 275 2.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02970 f521b1fba1dcb1ea7874e059c6da3535 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 275 1.2E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02970 f521b1fba1dcb1ea7874e059c6da3535 278 PANTHER PTHR30465:SF10 5 275 5.9E-97 T 22-04-2016 YPTB_RS02970 f521b1fba1dcb1ea7874e059c6da3535 278 PANTHER PTHR30465 5 275 5.9E-97 T 22-04-2016 YPTB_RS10675 0f71c391e259d27f3c4909e55e050f13 165 PANTHER PTHR10681 22 149 9.0E-24 T 22-04-2016 YPTB_RS10675 0f71c391e259d27f3c4909e55e050f13 165 Gene3D G3DSA:3.40.30.10 5 163 7.1E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS10675 0f71c391e259d27f3c4909e55e050f13 165 SUPERFAMILY SSF52833 25 161 1.68E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS10675 0f71c391e259d27f3c4909e55e050f13 165 Pfam PF00578 AhpC/TSA family 28 141 1.6E-19 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YPTB_RS04330 f8679aaa2f186bc66bff1f913ef3e3ba 151 PIRSF PIRSF005384 2 148 2.1E-53 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS04330 f8679aaa2f186bc66bff1f913ef3e3ba 151 Gene3D G3DSA:3.40.1400.10 2 148 2.4E-57 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS04330 f8679aaa2f186bc66bff1f913ef3e3ba 151 Pfam PF02502 Ribose/Galactose Isomerase 4 142 4.8E-51 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS04330 f8679aaa2f186bc66bff1f913ef3e3ba 151 SUPERFAMILY SSF89623 2 146 3.01E-52 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS04330 f8679aaa2f186bc66bff1f913ef3e3ba 151 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 143 4.9E-45 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 YPTB_RS04330 f8679aaa2f186bc66bff1f913ef3e3ba 151 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 2.0E-47 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS04330 f8679aaa2f186bc66bff1f913ef3e3ba 151 PANTHER PTHR30345 1 151 5.5E-75 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS10680 d5af8e752915b3088c342ffc3b88c617 103 SUPERFAMILY SSF46626 7 98 2.4E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS10680 d5af8e752915b3088c342ffc3b88c617 103 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 92 5.3E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS10680 d5af8e752915b3088c342ffc3b88c617 103 Gene3D G3DSA:1.10.760.10 17 99 8.5E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 Gene3D G3DSA:2.40.37.10 256 379 1.6E-19 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 SUPERFAMILY SSF51419 22 266 1.74E-46 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 299 364 4.7E-6 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 Gene3D G3DSA:3.20.20.10 37 255 8.1E-43 T 22-04-2016 IPR029066 PLP-binding barrel YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 253 272 1.7E-8 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 48 66 1.7E-8 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 170 183 1.7E-8 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 1.7E-8 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 PANTHER PTHR11482 6 377 2.8E-43 T 22-04-2016 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 29 263 8.7E-28 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 202 218 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 YPTB_RS10395 a75251a5862fc82686a45004e7d00576 388 SUPERFAMILY SSF50621 239 376 1.57E-22 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPTB_RS10500 0411e66f365cff7f275fbd961e731558 422 PANTHER PTHR30061:SF3 3 422 6.4E-167 T 22-04-2016 YPTB_RS10500 0411e66f365cff7f275fbd961e731558 422 SUPERFAMILY SSF53850 22 420 7.39E-78 T 22-04-2016 YPTB_RS10500 0411e66f365cff7f275fbd961e731558 422 Gene3D G3DSA:3.40.190.10 157 338 1.4E-53 T 22-04-2016 YPTB_RS10500 0411e66f365cff7f275fbd961e731558 422 PANTHER PTHR30061 3 422 6.4E-167 T 22-04-2016 YPTB_RS10500 0411e66f365cff7f275fbd961e731558 422 Pfam PF01547 Bacterial extracellular solute-binding protein 36 333 1.3E-55 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPTB_RS10500 0411e66f365cff7f275fbd961e731558 422 Gene3D G3DSA:3.40.190.10 137 156 5.6E-4 T 22-04-2016 YPTB_RS10500 0411e66f365cff7f275fbd961e731558 422 Gene3D G3DSA:3.40.190.10 35 104 5.6E-4 T 22-04-2016 YPTB_RS03550 723851f32c8dfcf1611ed30fd7f2aec6 125 SUPERFAMILY SSF110069 5 125 1.83E-46 T 22-04-2016 IPR007474 ApaG domain YPTB_RS03550 723851f32c8dfcf1611ed30fd7f2aec6 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.51 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG YPTB_RS03550 723851f32c8dfcf1611ed30fd7f2aec6 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 6.5E-33 T 22-04-2016 IPR007474 ApaG domain YPTB_RS03550 723851f32c8dfcf1611ed30fd7f2aec6 125 Gene3D G3DSA:2.60.40.1470 6 125 3.8E-44 T 22-04-2016 IPR007474 ApaG domain YPTB_RS03550 723851f32c8dfcf1611ed30fd7f2aec6 125 PANTHER PTHR14289 3 121 5.8E-60 T 22-04-2016 YPTB_RS12410 446bc755c180f92f4caa8f7d245c3e85 426 Gene3D G3DSA:1.20.1290.10 310 425 3.3E-26 T 22-04-2016 IPR029032 AhpD-like YPTB_RS12410 446bc755c180f92f4caa8f7d245c3e85 426 Gene3D G3DSA:1.20.1290.10 128 233 1.0E-11 T 22-04-2016 IPR029032 AhpD-like YPTB_RS12410 446bc755c180f92f4caa8f7d245c3e85 426 SUPERFAMILY SSF69118 282 425 1.44E-22 T 22-04-2016 IPR029032 AhpD-like YPTB_RS12410 446bc755c180f92f4caa8f7d245c3e85 426 SUPERFAMILY SSF69118 92 229 2.45E-12 T 22-04-2016 IPR029032 AhpD-like YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PANTHER PTHR37533 1 450 2.6E-139 T 22-04-2016 YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PANTHER PTHR37533:SF2 1 450 2.6E-139 T 22-04-2016 YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 Pfam PF02120 Flagellar hook-length control protein FliK 315 397 1.0E-20 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PRINTS PR01007 Flagellar hook-length control protein signature 305 327 2.05E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PRINTS PR01007 Flagellar hook-length control protein signature 330 348 2.05E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PRINTS PR01007 Flagellar hook-length control protein signature 363 386 2.05E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PRINTS PR01007 Flagellar hook-length control protein signature 74 91 2.05E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PRINTS PR01007 Flagellar hook-length control protein signature 282 304 2.05E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPTB_RS09340 fc250c5904f65380fca203e1807879f5 450 PRINTS PR01007 Flagellar hook-length control protein signature 348 363 2.05E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 Gene3D G3DSA:1.10.520.20 3 103 6.2E-34 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 2.1E-50 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 PANTHER PTHR11910 8 176 2.3E-58 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.934 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.5E-63 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPTB_RS21425 a4a4c50db4c1f86c245e8cc3e015f003 177 SUPERFAMILY SSF47928 3 104 1.44E-27 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.7E-94 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 SMART SM00382 27 214 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 Gene3D G3DSA:3.40.50.300 1 215 8.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 PANTHER PTHR24220 3 215 6.8E-126 T 22-04-2016 YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 Pfam PF00005 ABC transporter 18 165 8.2E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 SUPERFAMILY SSF52540 1 216 2.18E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01325 e2920b04b1327f740abc8394330bf65c 222 PANTHER PTHR24220:SF470 3 215 6.8E-126 T 22-04-2016 YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 Gene3D G3DSA:1.10.1200.10 3 77 4.5E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.9E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 PANTHER PTHR20863 4 78 2.1E-31 T 22-04-2016 YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 SUPERFAMILY SSF47336 2 76 1.09E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.3E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.174 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YPTB_RS13425 6921b6e3b114446f07f2df933b9c9d46 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.1E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 SUPERFAMILY SSF52540 4 236 3.24E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 SMART SM00382 28 231 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 6.1E-123 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 Gene3D G3DSA:3.40.50.300 5 235 1.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 PANTHER PTHR24220:SF497 5 238 9.9E-151 T 22-04-2016 YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 Pfam PF00005 ABC transporter 20 166 5.4E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS19080 57621bb28eac9587646224a967476fc1 241 PANTHER PTHR24220 5 238 9.9E-151 T 22-04-2016 YPTB_RS19640 e494714a6d4d7c4b272aed509d1451f1 181 PANTHER PTHR37625:SF3 1 181 4.4E-124 T 22-04-2016 YPTB_RS19640 e494714a6d4d7c4b272aed509d1451f1 181 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 171 4.0E-36 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS19640 e494714a6d4d7c4b272aed509d1451f1 181 PANTHER PTHR37625 1 181 4.4E-124 T 22-04-2016 YPTB_RS19640 e494714a6d4d7c4b272aed509d1451f1 181 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 174 7.2E-38 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 PANTHER PTHR22683:SF41 449 1307 0.0 T 22-04-2016 YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 SUPERFAMILY SSF52540 902 1214 7.44E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 Gene3D G3DSA:3.40.50.300 902 1208 3.8E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.2E-43 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 SUPERFAMILY SSF46785 1243 1308 2.18E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 PANTHER PTHR22683:SF41 1 313 0.0 T 22-04-2016 YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 Pfam PF09397 Ftsk gamma domain 1245 1305 9.5E-27 T 22-04-2016 IPR018541 FtsK gamma domain YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 PANTHER PTHR22683 1 313 0.0 T 22-04-2016 YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 PANTHER PTHR22683 449 1307 0.0 T 22-04-2016 YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 Pfam PF01580 FtsK/SpoIIIE family 928 1141 4.4E-72 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 YPTB_RS07740 0c918f0f649f37bc1a265ecfb5bc4e74 1310 SMART SM00843 1243 1308 1.1E-40 T 22-04-2016 IPR018541 FtsK gamma domain YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 Gene3D G3DSA:3.90.550.10 2 269 8.5E-101 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 Pfam PF00483 Nucleotidyl transferase 4 284 1.8E-70 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 PANTHER PTHR12526:SF387 152 287 1.5E-111 T 22-04-2016 YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 PANTHER PTHR12526:SF387 350 463 1.5E-111 T 22-04-2016 YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 Gene3D G3DSA:2.60.120.10 356 463 2.1E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 PANTHER PTHR12526 152 287 1.5E-111 T 22-04-2016 YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 PANTHER PTHR12526 350 463 1.5E-111 T 22-04-2016 YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 463 2.8E-231 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 Pfam PF01050 Mannose-6-phosphate isomerase 313 463 7.5E-61 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 SUPERFAMILY SSF51182 183 465 6.61E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS05580 d219e43810645951c635365a998ceb8f 468 SUPERFAMILY SSF53448 2 280 1.06E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF56425 227 358 1.79E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:1.20.58.100 427 537 1.2E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.50.50.60 3 233 1.2E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.50.50.60 353 415 1.2E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 PANTHER PTHR11632 1 584 0.0 T 22-04-2016 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.1E-5 T 22-04-2016 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-5 T 22-04-2016 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 Pfam PF00890 FAD binding domain 7 397 2.9E-114 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 PIRSF PIRSF000171 1 579 1.6E-41 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 PANTHER PTHR11632:SF50 1 584 0.0 T 22-04-2016 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF51905 361 416 1.89E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF51905 3 250 1.89E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:4.10.80.40 543 577 5.3E-17 T 22-04-2016 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.5E-9 T 22-04-2016 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-9 T 22-04-2016 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 7.5E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF46977 444 583 7.46E-45 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.90.700.10 234 352 6.5E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPTB_RS02370 05efe9b64a4d520c4a5000b218d96d7d 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.5E-243 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPTB_RS20540 e0e060e7d178d59354563456fd0ea608 438 PIRSF PIRSF002746 1 438 3.7E-159 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPTB_RS20540 e0e060e7d178d59354563456fd0ea608 438 Pfam PF02447 GntP family permease 1 437 2.3E-182 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPTB_RS20540 e0e060e7d178d59354563456fd0ea608 438 PANTHER PTHR30354:SF4 1 438 0.0 T 22-04-2016 YPTB_RS20540 e0e060e7d178d59354563456fd0ea608 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 3.1E-196 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPTB_RS20540 e0e060e7d178d59354563456fd0ea608 438 PANTHER PTHR30354 1 438 0.0 T 22-04-2016 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 Pfam PF00765 Autoinducer synthase 13 187 6.3E-71 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 22-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 Gene3D G3DSA:3.40.630.30 1 210 1.2E-62 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PANTHER PTHR39322:SF1 2 216 9.7E-131 T 22-04-2016 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 PANTHER PTHR39322 2 216 9.7E-131 T 22-04-2016 YPTB_RS17640 a13902a6c643a531440160ad1e3fd1ed 216 SUPERFAMILY SSF55729 1 210 5.93E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS11780 a3891cd30ac2530cb88ea7e2a408cb01 688 PANTHER PTHR30252:SF2 5 684 0.0 T 22-04-2016 YPTB_RS11780 a3891cd30ac2530cb88ea7e2a408cb01 688 Pfam PF02554 Carbon starvation protein CstA 32 407 9.1E-170 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YPTB_RS11780 a3891cd30ac2530cb88ea7e2a408cb01 688 PANTHER PTHR30252 5 684 0.0 T 22-04-2016 YPTB_RS11780 a3891cd30ac2530cb88ea7e2a408cb01 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 3.1E-32 T 22-04-2016 IPR025299 CstA, C-terminal domain YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 PIRSF PIRSF001267 1 496 1.1E-180 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 PANTHER PTHR30005 1 497 0.0 T 22-04-2016 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 300 2.6E-93 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 PANTHER PTHR30005:SF2 1 497 0.0 T 22-04-2016 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 SUPERFAMILY SSF53067 132 300 4.21E-42 T 22-04-2016 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 58.997 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 Gene3D G3DSA:3.30.420.150 128 300 7.9E-52 T 22-04-2016 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 Gene3D G3DSA:3.30.420.40 3 127 3.6E-46 T 22-04-2016 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 SUPERFAMILY SSF53067 7 128 2.53E-38 T 22-04-2016 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 Pfam PF02541 Ppx/GppA phosphatase family 21 301 1.7E-96 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YPTB_RS01000 e5c27af233afab7a4a09efa372427121 497 SUPERFAMILY SSF109604 307 494 1.48E-44 T 22-04-2016 YPTB_RS01985 57086288f292ae1d29412d7fcd401580 334 Gene3D G3DSA:1.10.3470.10 7 331 5.2E-108 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS01985 57086288f292ae1d29412d7fcd401580 334 SUPERFAMILY SSF81345 5 327 4.84E-87 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS01985 57086288f292ae1d29412d7fcd401580 334 Pfam PF01032 FecCD transport family 17 327 4.1E-94 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS01985 57086288f292ae1d29412d7fcd401580 334 PANTHER PTHR30472 4 333 4.1E-162 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS01985 57086288f292ae1d29412d7fcd401580 334 PANTHER PTHR30472:SF3 4 333 4.1E-162 T 22-04-2016 YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 Gene3D G3DSA:3.40.50.720 239 377 3.9E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 PANTHER PTHR16254:SF27 1 388 7.2E-100 T 22-04-2016 YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 PANTHER PTHR16254 1 388 7.2E-100 T 22-04-2016 YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 Gene3D G3DSA:1.10.287.70 139 222 3.2E-13 T 22-04-2016 YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 Pfam PF02254 TrkA-N domain 243 356 2.7E-15 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 Pfam PF07885 Ion channel 141 218 9.3E-11 T 22-04-2016 IPR013099 Potassium channel domain YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 SUPERFAMILY SSF51735 239 376 7.56E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS15870 4547e5aefec59c01acd344f6eda4f0a9 391 SUPERFAMILY SSF81324 114 262 8.24E-21 T 22-04-2016 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 370 2.2E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314 53 427 1.3E-146 T 22-04-2016 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314 25 36 1.3E-146 T 22-04-2016 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.40.50.1100 106 195 2.4E-12 T 22-04-2016 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 Pfam PF14821 Threonine synthase N terminus 8 80 5.0E-11 T 22-04-2016 IPR029144 Threonine synthase, N-terminal YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 SUPERFAMILY SSF53686 1 426 1.83E-132 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 TIGRFAM TIGR00260 thrC: threonine synthase 53 397 3.7E-121 T 22-04-2016 IPR004450 Threonine synthase-like YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.90.1380.10 1 84 8.4E-20 T 22-04-2016 IPR029144 Threonine synthase, N-terminal YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.40.50.1100 321 401 4.6E-15 T 22-04-2016 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.40.50.1100 196 319 3.1E-52 T 22-04-2016 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314:SF1 53 427 1.3E-146 T 22-04-2016 YPTB_RS03405 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314:SF1 25 36 1.3E-146 T 22-04-2016 YPTB_RS14105 eb24891342a6691b67a997a39c7b391b 147 PANTHER PTHR30505:SF3 1 147 1.8E-74 T 22-04-2016 YPTB_RS14105 eb24891342a6691b67a997a39c7b391b 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 4.7E-37 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS14105 eb24891342a6691b67a997a39c7b391b 147 PANTHER PTHR30505 1 147 1.8E-74 T 22-04-2016 YPTB_RS14105 eb24891342a6691b67a997a39c7b391b 147 Gene3D G3DSA:3.40.930.10 1 146 1.9E-54 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPTB_RS14105 eb24891342a6691b67a997a39c7b391b 147 SUPERFAMILY SSF55804 1 145 1.22E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPTB_RS13610 836574fa37abd3e91d928173432b81e1 184 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 184 1.8E-70 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 YPTB_RS13610 836574fa37abd3e91d928173432b81e1 184 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 184 1.9E-64 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 YPTB_RS04865 c2ca1e8c4e711c86ac2f1eadf7b5ee21 222 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 121.935 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 YPTB_RS04865 c2ca1e8c4e711c86ac2f1eadf7b5ee21 222 SUPERFAMILY SSF53639 3 199 1.75E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS04865 c2ca1e8c4e711c86ac2f1eadf7b5ee21 222 PANTHER PTHR10640 21 197 1.2E-42 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 YPTB_RS04865 c2ca1e8c4e711c86ac2f1eadf7b5ee21 222 Gene3D G3DSA:3.40.225.10 6 200 5.0E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS04865 c2ca1e8c4e711c86ac2f1eadf7b5ee21 222 SMART SM01007 8 196 5.2E-48 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS04865 c2ca1e8c4e711c86ac2f1eadf7b5ee21 222 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 195 1.6E-40 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPTB_RS04865 c2ca1e8c4e711c86ac2f1eadf7b5ee21 222 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 199 3.0E-73 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409 197 376 7.0E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409 1 173 7.0E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 Gene3D G3DSA:1.10.620.20 3 340 6.7E-123 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409:SF23 197 376 7.0E-270 T 22-04-2016 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409:SF23 1 173 7.0E-270 T 22-04-2016 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 8.7E-46 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPTB_RS06920 5013ba42746c9c1b70dd24d4e82c3fe1 376 SUPERFAMILY SSF47240 3 340 1.79E-111 T 22-04-2016 IPR009078 Ferritin-like superfamily YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 SUPERFAMILY SSF46548 7 157 1.1E-41 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.5E-37 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.5E-37 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.5E-37 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.5E-37 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.5E-37 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.40.50.720 401 471 1.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.40.50.720 150 236 1.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 SUPERFAMILY SSF51971 145 401 1.06E-68 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 4.7E-38 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PANTHER PTHR11938:SF93 23 472 0.0 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PANTHER PTHR11938 23 472 0.0 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 4.0E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:1.10.1060.10 5 149 1.1E-47 T 22-04-2016 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 1.0E-261 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 YPTB_RS18965 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.50.50.60 237 400 2.4E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS09810 489314350c9ff9dd46fccfff37cc463a 534 SUPERFAMILY SSF52980 1 180 2.04E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPTB_RS09810 489314350c9ff9dd46fccfff37cc463a 534 Gene3D G3DSA:3.90.320.10 1 187 5.2E-25 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 YPTB_RS09810 489314350c9ff9dd46fccfff37cc463a 534 Pfam PF09588 YqaJ-like viral recombinase domain 12 147 2.6E-6 T 22-04-2016 IPR019080 YqaJ viral recombinase YPTB_RS09810 489314350c9ff9dd46fccfff37cc463a 534 PIRSF PIRSF028503 1 528 6.0E-88 T 22-04-2016 IPR016889 Uncharacterised conserved protein UCP028503 YPTB_RS20875 8cd453bc3004a123a4bcc63494b38558 99 PANTHER PTHR35810 5 80 9.1E-32 T 22-04-2016 YPTB_RS20875 8cd453bc3004a123a4bcc63494b38558 99 PANTHER PTHR35810:SF1 5 80 9.1E-32 T 22-04-2016 YPTB_RS00980 71fd694154d9114cdbd10d77c6a57fcd 263 Gene3D G3DSA:2.130.10.10 35 250 1.6E-13 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPTB_RS00980 71fd694154d9114cdbd10d77c6a57fcd 263 SUPERFAMILY SSF50969 27 255 1.29E-22 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like YPTB_RS00980 71fd694154d9114cdbd10d77c6a57fcd 263 PANTHER PTHR31270 1 260 3.2E-104 T 22-04-2016 YPTB_RS00980 71fd694154d9114cdbd10d77c6a57fcd 263 Pfam PF05096 Glutamine cyclotransferase 27 259 1.1E-89 T 22-04-2016 IPR007788 Glutamine cyclotransferase YPTB_RS00980 71fd694154d9114cdbd10d77c6a57fcd 263 PANTHER PTHR31270:SF0 1 260 3.2E-104 T 22-04-2016 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 4.2E-96 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 SUPERFAMILY SSF52540 8 205 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 PANTHER PTHR10285 1 213 2.8E-96 T 22-04-2016 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 Gene3D G3DSA:3.40.50.300 3 205 3.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.293 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPTB_RS08450 e6bba29fee2a35bf44b65ae7f0af004f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 1.6E-43 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 SUPERFAMILY SSF56281 1 251 2.1E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.377 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 9.3E-104 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 PANTHER PTHR11935:SF7 1 251 3.2E-100 T 22-04-2016 YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 PIRSF PIRSF005457 1 251 5.1E-89 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 PANTHER PTHR11935 1 251 3.2E-100 T 22-04-2016 YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 6.0E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 9.9E-23 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 Gene3D G3DSA:3.60.15.10 4 251 4.9E-81 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS16045 ddf62b6761ee2c9bd87e11f518735645 251 SMART SM00849 11 165 7.6E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 9.0E-171 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 SUPERFAMILY SSF53743 1 326 1.18E-123 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 PANTHER PTHR38464:SF1 2 500 8.6E-244 T 22-04-2016 YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 SUPERFAMILY SSF50443 329 498 1.96E-71 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 Pfam PF02610 L-arabinose isomerase 5 359 1.5E-177 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 PIRSF PIRSF001478 1 500 4.1E-259 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.637 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 1.4E-46 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPTB_RS11860 89288690155748f1b47d92b12f5f66b5 500 PANTHER PTHR38464 2 500 8.6E-244 T 22-04-2016 YPTB_RS06590 b4f0105ad7b8fc23b5646c6619ad2747 307 Gene3D G3DSA:3.40.50.10680 82 301 3.0E-50 T 22-04-2016 YPTB_RS06590 b4f0105ad7b8fc23b5646c6619ad2747 307 SUPERFAMILY SSF142338 11 295 2.75E-80 T 22-04-2016 YPTB_RS06590 b4f0105ad7b8fc23b5646c6619ad2747 307 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.733 T 22-04-2016 IPR010119 Gluconeogenesis factor YPTB_RS06590 b4f0105ad7b8fc23b5646c6619ad2747 307 PANTHER PTHR30135 1 307 3.6E-116 T 22-04-2016 YPTB_RS06590 b4f0105ad7b8fc23b5646c6619ad2747 307 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 261 3.0E-94 T 22-04-2016 IPR010119 Gluconeogenesis factor YPTB_RS06590 b4f0105ad7b8fc23b5646c6619ad2747 307 Pfam PF01933 Uncharacterised protein family UPF0052 12 292 3.1E-73 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 PANTHER PTHR30191:SF5 1 127 2.9E-103 T 22-04-2016 YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 Gene3D G3DSA:3.20.70.20 27 126 7.0E-37 T 22-04-2016 YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 SUPERFAMILY SSF51998 27 125 1.33E-24 T 22-04-2016 YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.1E-71 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 41.885 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 Pfam PF01228 Glycine radical 14 108 1.0E-22 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 PANTHER PTHR30191 1 127 2.9E-103 T 22-04-2016 YPTB_RS15690 0121345a6eb833a5931dce08dfec334f 127 PIRSF PIRSF000378 2 127 1.2E-54 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YPTB_RS19650 0763120230ec0c0a288bee18281601eb 362 PANTHER PTHR35564:SF3 20 356 9.0E-181 T 22-04-2016 YPTB_RS19650 0763120230ec0c0a288bee18281601eb 362 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 38 348 4.1E-92 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS19650 0763120230ec0c0a288bee18281601eb 362 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 38 348 3.6E-99 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS19650 0763120230ec0c0a288bee18281601eb 362 PANTHER PTHR35564 20 356 9.0E-181 T 22-04-2016 YPTB_RS16520 24f23de162f25bd97dd78c73b7fdd9bb 211 Pfam PF01323 DSBA-like thioredoxin domain 9 185 1.9E-6 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YPTB_RS16520 24f23de162f25bd97dd78c73b7fdd9bb 211 SUPERFAMILY SSF52833 4 192 5.29E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS16520 24f23de162f25bd97dd78c73b7fdd9bb 211 Gene3D G3DSA:1.10.472.60 48 167 4.1E-33 T 22-04-2016 IPR023169 UPF0413, central domain YPTB_RS16515 9fc8efa7af9961a95e193f9a662cbd88 295 SUPERFAMILY SSF56281 26 251 6.09E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS16515 9fc8efa7af9961a95e193f9a662cbd88 295 PANTHER PTHR11935 1 295 2.4E-112 T 22-04-2016 YPTB_RS16515 9fc8efa7af9961a95e193f9a662cbd88 295 Gene3D G3DSA:3.60.15.10 33 254 1.6E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS16515 9fc8efa7af9961a95e193f9a662cbd88 295 Pfam PF00753 Metallo-beta-lactamase superfamily 44 228 4.4E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS16515 9fc8efa7af9961a95e193f9a662cbd88 295 SMART SM00849 43 228 3.1E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS16515 9fc8efa7af9961a95e193f9a662cbd88 295 PANTHER PTHR11935:SF5 1 295 2.4E-112 T 22-04-2016 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 SUPERFAMILY SSF52922 533 664 8.25E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 Gene3D G3DSA:3.40.50.970 4 322 5.9E-135 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 SUPERFAMILY SSF52518 5 330 6.7E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 PANTHER PTHR11624 334 663 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 1.8E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 PANTHER PTHR11624:SF85 334 663 0.0 T 22-04-2016 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 PANTHER PTHR11624:SF85 1 310 0.0 T 22-04-2016 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 Gene3D G3DSA:3.40.50.920 538 663 2.2E-52 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.4E-170 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 Pfam PF02780 Transketolase, C-terminal domain 540 655 5.8E-20 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 SMART SM00861 355 525 1.5E-68 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 SUPERFAMILY SSF52518 334 526 1.36E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 Gene3D G3DSA:3.40.50.970 328 533 7.7E-82 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPTB_RS17325 c5b9054de5cd877e039a904884343b6b 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 Gene3D G3DSA:3.40.30.10 7 101 2.7E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 Gene3D G3DSA:1.20.1050.10 102 208 6.9E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 PANTHER PTHR11260 9 207 3.5E-129 T 22-04-2016 YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.4E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 4.5E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 SUPERFAMILY SSF47616 82 208 1.08E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 PANTHER PTHR11260:SF44 9 207 3.5E-129 T 22-04-2016 YPTB_RS18980 6f828bb966a65b33441b6dba57f40701 213 SUPERFAMILY SSF52833 11 110 1.39E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS21075 14139d5973962c8630f5fe79a08b9359 433 Pfam PF07676 WD40-like Beta Propeller Repeat 407 428 0.066 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPTB_RS21075 14139d5973962c8630f5fe79a08b9359 433 SUPERFAMILY SSF82171 28 159 4.71E-21 T 22-04-2016 YPTB_RS21075 14139d5973962c8630f5fe79a08b9359 433 SUPERFAMILY SSF82171 300 432 4.71E-21 T 22-04-2016 YPTB_RS21075 14139d5973962c8630f5fe79a08b9359 433 SUPERFAMILY SSF82171 254 265 4.71E-21 T 22-04-2016 YPTB_RS21075 14139d5973962c8630f5fe79a08b9359 433 Gene3D G3DSA:2.120.10.30 26 159 4.6E-29 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like YPTB_RS21075 14139d5973962c8630f5fe79a08b9359 433 Gene3D G3DSA:2.120.10.30 254 423 4.6E-29 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like YPTB_RS21075 14139d5973962c8630f5fe79a08b9359 433 Pfam PF12566 Protein of unknown function (DUF3748) 73 193 1.7E-57 T 22-04-2016 IPR022223 Protein of unknown function DUF3748 YPTB_RS05610 45106cdf1b39b698bc5d870cce55101a 404 SUPERFAMILY SSF103473 17 398 1.31E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS05610 45106cdf1b39b698bc5d870cce55101a 404 PANTHER PTHR23505:SF8 1 404 1.6E-169 T 22-04-2016 YPTB_RS05610 45106cdf1b39b698bc5d870cce55101a 404 PANTHER PTHR23505 1 404 1.6E-169 T 22-04-2016 YPTB_RS05610 45106cdf1b39b698bc5d870cce55101a 404 Pfam PF07690 Major Facilitator Superfamily 30 258 5.5E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS05610 45106cdf1b39b698bc5d870cce55101a 404 Gene3D G3DSA:1.20.1250.20 25 197 5.4E-20 T 22-04-2016 YPTB_RS05610 45106cdf1b39b698bc5d870cce55101a 404 Gene3D G3DSA:1.20.1250.20 227 397 1.9E-18 T 22-04-2016 YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 Gene3D G3DSA:1.10.150.240 19 62 1.0E-4 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 PANTHER PTHR18901:SF20 1 206 1.1E-151 T 22-04-2016 YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 PANTHER PTHR18901 1 206 1.1E-151 T 22-04-2016 YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 SUPERFAMILY SSF56784 4 203 1.82E-45 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 4.2E-22 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 Gene3D G3DSA:3.40.50.1000 63 206 1.5E-44 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 1.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 1.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS14070 07db6feb2655739384738a233cdbfee6 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 181 4.8E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS15945 70e05fff310768eeecdacbb5ecab7e34 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 322 2.8E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15945 70e05fff310768eeecdacbb5ecab7e34 327 SUPERFAMILY SSF161098 97 307 1.03E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15945 70e05fff310768eeecdacbb5ecab7e34 327 Gene3D G3DSA:1.10.3720.10 95 321 3.7E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15945 70e05fff310768eeecdacbb5ecab7e34 327 PANTHER PTHR30465 1 325 1.6E-241 T 22-04-2016 YPTB_RS15945 70e05fff310768eeecdacbb5ecab7e34 327 PANTHER PTHR30465:SF73 1 325 1.6E-241 T 22-04-2016 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 SUPERFAMILY SSF56655 2 327 3.38E-110 T 22-04-2016 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 3.9E-78 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PIRSF PIRSF000904 1 333 6.3E-122 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 7.8E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 7.8E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 7.8E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 7.8E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 7.8E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 7.8E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 Gene3D G3DSA:3.30.540.10 2 194 4.2E-77 T 22-04-2016 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.129 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PIRSF PIRSF500210 1 332 1.0E-124 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 Gene3D G3DSA:3.40.190.80 197 329 3.1E-56 T 22-04-2016 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 YPTB_RS02615 20c32bef81fca6c59c4d03218f4542da 337 PANTHER PTHR11556 1 336 7.8E-185 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YPTB_RS17820 08a3041290f9a447856471a6e85aa197 375 PANTHER PTHR22604 1 188 2.5E-28 T 22-04-2016 YPTB_RS17820 08a3041290f9a447856471a6e85aa197 375 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 6.4E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS17820 08a3041290f9a447856471a6e85aa197 375 PANTHER PTHR22604:SF123 1 188 2.5E-28 T 22-04-2016 YPTB_RS17820 08a3041290f9a447856471a6e85aa197 375 PIRSF PIRSF017494 1 369 3.7E-144 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPTB_RS17820 08a3041290f9a447856471a6e85aa197 375 SUPERFAMILY SSF51735 6 140 5.15E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17820 08a3041290f9a447856471a6e85aa197 375 Gene3D G3DSA:3.40.50.720 8 139 4.8E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS17820 08a3041290f9a447856471a6e85aa197 375 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 3 355 1.0E-170 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPTB_RS15890 bdb99728a97a7baff40ce3774759d0b2 330 PIRSF PIRSF016502 7 330 3.6E-104 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YPTB_RS15890 bdb99728a97a7baff40ce3774759d0b2 330 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 21 319 1.3E-116 T 22-04-2016 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 YPTB_RS15890 bdb99728a97a7baff40ce3774759d0b2 330 PANTHER PTHR10464 1 330 6.5E-274 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YPTB_RS15890 bdb99728a97a7baff40ce3774759d0b2 330 Pfam PF03253 Urea transporter 24 320 8.0E-94 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YPTB_RS15890 bdb99728a97a7baff40ce3774759d0b2 330 Gene3D G3DSA:1.10.3430.10 11 324 1.9E-95 T 22-04-2016 IPR029020 Ammonium/urea transporter YPTB_RS15890 bdb99728a97a7baff40ce3774759d0b2 330 PANTHER PTHR10464:SF8 1 330 6.5E-274 T 22-04-2016 YPTB_RS03165 74ba5634349a8f60b0696922a12fde28 91 Pfam PF02597 ThiS family 5 91 7.8E-11 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPTB_RS03165 74ba5634349a8f60b0696922a12fde28 91 SUPERFAMILY SSF54285 1 91 2.62E-13 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTB_RS03165 74ba5634349a8f60b0696922a12fde28 91 Gene3D G3DSA:3.10.20.30 1 91 3.1E-13 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS20075 6b0568feadd82f9ded8746f8dcb995e2 266 Gene3D G3DSA:3.10.50.40 133 246 2.0E-44 T 22-04-2016 YPTB_RS20075 6b0568feadd82f9ded8746f8dcb995e2 266 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 243 3.6E-29 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPTB_RS20075 6b0568feadd82f9ded8746f8dcb995e2 266 Gene3D G3DSA:1.10.287.460 30 132 6.4E-44 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPTB_RS20075 6b0568feadd82f9ded8746f8dcb995e2 266 PANTHER PTHR10516 133 246 6.8E-50 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPTB_RS20075 6b0568feadd82f9ded8746f8dcb995e2 266 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 30 149 1.2E-38 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPTB_RS20075 6b0568feadd82f9ded8746f8dcb995e2 266 SUPERFAMILY SSF54534 40 246 2.16E-64 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 Pfam PF03734 L,D-transpeptidase catalytic domain 377 546 6.2E-29 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 SUPERFAMILY SSF141523 378 430 4.32E-19 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 SUPERFAMILY SSF141523 487 536 4.32E-19 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582:SF10 34 234 0.0 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582:SF10 471 616 0.0 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582:SF10 315 434 0.0 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:1.10.101.10 215 252 5.9E-25 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:1.10.101.10 316 359 5.9E-25 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 Pfam PF01471 Putative peptidoglycan binding domain 316 350 2.9E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582 34 234 0.0 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582 471 616 0.0 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582 315 434 0.0 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 SUPERFAMILY SSF47090 315 358 4.24E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:2.40.440.10 489 537 6.7E-13 T 22-04-2016 YPTB_RS07900 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:2.40.440.10 372 421 6.7E-13 T 22-04-2016 YPTB_RS05945 34976dd1c1a90c5c70cc9dce95ced955 306 Pfam PF01261 Xylose isomerase-like TIM barrel 42 238 7.0E-23 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS05945 34976dd1c1a90c5c70cc9dce95ced955 306 SUPERFAMILY SSF51658 14 299 8.57E-53 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS05945 34976dd1c1a90c5c70cc9dce95ced955 306 Gene3D G3DSA:3.20.20.150 12 299 8.2E-76 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS05945 34976dd1c1a90c5c70cc9dce95ced955 306 PANTHER PTHR12110:SF4 16 306 7.8E-164 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 YPTB_RS05945 34976dd1c1a90c5c70cc9dce95ced955 306 PANTHER PTHR12110 16 306 7.8E-164 T 22-04-2016 YPTB_RS05945 34976dd1c1a90c5c70cc9dce95ced955 306 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 13 299 2.5E-125 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 YPTB_RS04345 94d68a65f64c07505b6ecbfaad8df7fe 333 PANTHER PTHR28629 1 329 1.8E-150 T 22-04-2016 YPTB_RS04345 94d68a65f64c07505b6ecbfaad8df7fe 333 Gene3D G3DSA:3.30.1180.20 185 329 2.5E-53 T 22-04-2016 YPTB_RS04345 94d68a65f64c07505b6ecbfaad8df7fe 333 PANTHER PTHR28629:SF2 1 329 1.8E-150 T 22-04-2016 YPTB_RS04345 94d68a65f64c07505b6ecbfaad8df7fe 333 Gene3D G3DSA:3.40.50.10440 11 183 4.1E-59 T 22-04-2016 YPTB_RS04345 94d68a65f64c07505b6ecbfaad8df7fe 333 SUPERFAMILY SSF82549 11 329 5.75E-112 T 22-04-2016 YPTB_RS04345 94d68a65f64c07505b6ecbfaad8df7fe 333 Pfam PF02733 Dak1 domain 18 325 2.0E-111 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 6.8E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 7.7E-104 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Gene3D G3DSA:3.60.21.10 1 125 3.9E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Gene3D G3DSA:3.60.21.10 173 204 3.9E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 PANTHER PTHR34990 1 240 1.7E-138 T 22-04-2016 YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 PANTHER PTHR34990:SF1 1 240 1.7E-138 T 22-04-2016 YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 127.354 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 YPTB_RS05695 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 SUPERFAMILY SSF56300 3 238 2.71E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS20265 5ba69963cf445e69fb9ced6a53aba7b6 329 Gene3D G3DSA:3.30.70.1070 243 307 6.5E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS20265 5ba69963cf445e69fb9ced6a53aba7b6 329 Hamap MF_02021 Cell division protein DamX [damX]. 1 329 25.57 T 22-04-2016 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 YPTB_RS20265 5ba69963cf445e69fb9ced6a53aba7b6 329 SUPERFAMILY SSF110997 244 309 5.1E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS20265 5ba69963cf445e69fb9ced6a53aba7b6 329 Pfam PF05036 Sporulation related domain 245 318 2.9E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPTB_RS14950 d9cbb0d87a41874849583ea47ba6194c 199 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 10 193 1.9E-105 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 YPTB_RS14950 d9cbb0d87a41874849583ea47ba6194c 199 SUPERFAMILY SSF48695 16 195 5.06E-64 T 22-04-2016 IPR011031 Multihaem cytochrome YPTB_RS14950 d9cbb0d87a41874849583ea47ba6194c 199 PANTHER PTHR30333:SF1 1 199 7.9E-116 T 22-04-2016 YPTB_RS14950 d9cbb0d87a41874849583ea47ba6194c 199 PIRSF PIRSF000013 1 199 2.2E-109 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 YPTB_RS14950 d9cbb0d87a41874849583ea47ba6194c 199 Gene3D G3DSA:1.10.3820.10 18 192 1.4E-27 T 22-04-2016 YPTB_RS14950 d9cbb0d87a41874849583ea47ba6194c 199 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 21 192 3.3E-78 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal YPTB_RS14950 d9cbb0d87a41874849583ea47ba6194c 199 PANTHER PTHR30333 1 199 7.9E-116 T 22-04-2016 YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 PIRSF PIRSF016183 9 182 1.5E-73 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 Gene3D G3DSA:1.10.60.30 111 181 9.2E-32 T 22-04-2016 IPR023153 PSPTO4464-like domain YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 SUPERFAMILY SSF158710 36 179 7.32E-53 T 22-04-2016 YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 Gene3D G3DSA:1.10.60.30 35 109 4.3E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 Pfam PF04751 Protein of unknown function (DUF615) 25 175 3.4E-57 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 PANTHER PTHR38101:SF1 4 182 7.0E-90 T 22-04-2016 YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 24.021 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YPTB_RS19165 3bf17bb2e1aebfabf796823c2ae5cc12 182 PANTHER PTHR38101 4 182 7.0E-90 T 22-04-2016 YPTB_RS02590 0c67cb0520820538d8b9fa8b14e9d1db 212 Gene3D G3DSA:3.30.1060.10 10 199 5.5E-77 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPTB_RS02590 0c67cb0520820538d8b9fa8b14e9d1db 212 PANTHER PTHR10173:SF36 6 204 3.1E-100 T 22-04-2016 YPTB_RS02590 0c67cb0520820538d8b9fa8b14e9d1db 212 SUPERFAMILY SSF55068 8 208 7.72E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPTB_RS02590 0c67cb0520820538d8b9fa8b14e9d1db 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 7.9E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPTB_RS02590 0c67cb0520820538d8b9fa8b14e9d1db 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.44 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPTB_RS02590 0c67cb0520820538d8b9fa8b14e9d1db 212 PANTHER PTHR10173 6 204 3.1E-100 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 YPTB_RS02590 0c67cb0520820538d8b9fa8b14e9d1db 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 8.6E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPTB_RS16770 7db9a2fbc0fde570d8437ebbe3d73b6c 435 PANTHER PTHR30193 110 435 5.6E-194 T 22-04-2016 YPTB_RS16770 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 418 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16770 7db9a2fbc0fde570d8437ebbe3d73b6c 435 SUPERFAMILY SSF161098 182 418 1.14E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16770 7db9a2fbc0fde570d8437ebbe3d73b6c 435 SUPERFAMILY SSF160964 128 187 5.36E-8 T 22-04-2016 YPTB_RS16770 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Gene3D G3DSA:1.10.3720.10 196 428 1.9E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16770 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Gene3D G3DSA:1.20.58.370 129 167 3.9E-9 T 22-04-2016 YPTB_RS16770 7db9a2fbc0fde570d8437ebbe3d73b6c 435 PANTHER PTHR30193:SF17 110 435 5.6E-194 T 22-04-2016 YPTB_RS14585 8ca86850cb89e4b356547d220430d845 218 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 209 8.7E-98 T 22-04-2016 IPR008517 Protein of unknown function DUF799 YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PIRSF PIRSF002869 1 510 7.3E-175 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PANTHER PTHR11206 217 442 2.0E-101 T 22-04-2016 YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PANTHER PTHR11206 70 82 2.0E-101 T 22-04-2016 YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PANTHER PTHR11206 466 486 2.0E-101 T 22-04-2016 YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 Pfam PF03023 MviN-like protein 28 477 1.0E-149 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 507 3.5E-163 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PANTHER PTHR11206:SF90 217 442 2.0E-101 T 22-04-2016 YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PANTHER PTHR11206:SF90 70 82 2.0E-101 T 22-04-2016 YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PANTHER PTHR11206:SF90 466 486 2.0E-101 T 22-04-2016 YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11115 55c15e614e1f03058d92189248a606c4 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB_RS11120 6835278c2de456d72802d4840f0a0a45 553 Gene3D G3DSA:3.10.20.310 73 150 2.8E-13 T 22-04-2016 YPTB_RS11120 6835278c2de456d72802d4840f0a0a45 553 PANTHER PTHR34597:SF2 1 553 1.3E-224 T 22-04-2016 YPTB_RS11120 6835278c2de456d72802d4840f0a0a45 553 Pfam PF08479 POTRA domain, ShlB-type 77 150 7.8E-19 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB_RS11120 6835278c2de456d72802d4840f0a0a45 553 Gene3D G3DSA:2.40.160.50 179 553 3.3E-81 T 22-04-2016 YPTB_RS11120 6835278c2de456d72802d4840f0a0a45 553 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 158 553 1.2E-105 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPTB_RS11120 6835278c2de456d72802d4840f0a0a45 553 PANTHER PTHR34597 1 553 1.3E-224 T 22-04-2016 YPTB_RS11120 6835278c2de456d72802d4840f0a0a45 553 PIRSF PIRSF029745 2 553 3.6E-102 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPTB_RS11870 00946c8fe6942b512611fc178eead206 327 PIRSF PIRSF002816 2 326 2.0E-149 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 YPTB_RS11870 00946c8fe6942b512611fc178eead206 327 PANTHER PTHR30036:SF1 1 326 2.3E-114 T 22-04-2016 YPTB_RS11870 00946c8fe6942b512611fc178eead206 327 SUPERFAMILY SSF53822 26 324 1.81E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS11870 00946c8fe6942b512611fc178eead206 327 Gene3D G3DSA:3.40.50.2300 148 296 1.3E-50 T 22-04-2016 YPTB_RS11870 00946c8fe6942b512611fc178eead206 327 Gene3D G3DSA:3.40.50.2300 25 147 2.6E-42 T 22-04-2016 YPTB_RS11870 00946c8fe6942b512611fc178eead206 327 PANTHER PTHR30036 1 326 2.3E-114 T 22-04-2016 YPTB_RS11870 00946c8fe6942b512611fc178eead206 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 5.1E-86 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB_RS10140 c638b9cfe4c667a0c5f8cd299f9a3748 479 PANTHER PTHR35191 1 194 8.9E-60 T 22-04-2016 YPTB_RS10140 c638b9cfe4c667a0c5f8cd299f9a3748 479 Pfam PF12571 Phage tail-collar fibre protein 1 150 3.3E-62 T 22-04-2016 IPR022225 Phage tail fibre protein YPTB_RS12180 f8da99eeaa614a9cb51f17d74e897076 994 Pfam PF03497 Anthrax toxin LF subunit 697 799 4.7E-19 T 22-04-2016 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 YPTB_RS12180 f8da99eeaa614a9cb51f17d74e897076 994 PANTHER PTHR11219 38 78 0.0 T 22-04-2016 YPTB_RS12180 f8da99eeaa614a9cb51f17d74e897076 994 PANTHER PTHR11219 99 830 0.0 T 22-04-2016 YPTB_RS12180 f8da99eeaa614a9cb51f17d74e897076 994 SUPERFAMILY SSF81298 674 984 3.66E-119 T 22-04-2016 YPTB_RS12180 f8da99eeaa614a9cb51f17d74e897076 994 PANTHER PTHR11219:SF45 38 78 0.0 T 22-04-2016 YPTB_RS12180 f8da99eeaa614a9cb51f17d74e897076 994 PANTHER PTHR11219:SF45 99 830 0.0 T 22-04-2016 YPTB_RS12180 f8da99eeaa614a9cb51f17d74e897076 994 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 610 690 2.5E-26 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPTB_RS02955 5663bb336173ffa5ed230cc044a35e05 712 PANTHER PTHR21075 1 711 0.0 T 22-04-2016 YPTB_RS02955 5663bb336173ffa5ed230cc044a35e05 712 Gene3D G3DSA:3.20.70.20 124 685 1.5E-183 T 22-04-2016 YPTB_RS02955 5663bb336173ffa5ed230cc044a35e05 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTB_RS02955 5663bb336173ffa5ed230cc044a35e05 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.5E-203 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YPTB_RS02955 5663bb336173ffa5ed230cc044a35e05 712 Pfam PF03477 ATP cone domain 4 89 2.5E-19 T 22-04-2016 IPR005144 ATP-cone domain YPTB_RS02955 5663bb336173ffa5ed230cc044a35e05 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 6.7E-181 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YPTB_RS02955 5663bb336173ffa5ed230cc044a35e05 712 SUPERFAMILY SSF51998 121 687 5.49E-192 T 22-04-2016 YPTB_RS19195 38506d3759974918c4e845c06455592b 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.2E-20 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 YPTB_RS19195 38506d3759974918c4e845c06455592b 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 23.167 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 YPTB_RS17655 ee7f151c25f5e779e51a9f036ce9dc7c 277 Pfam PF00775 Dioxygenase 71 166 8.0E-8 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 YPTB_RS17655 ee7f151c25f5e779e51a9f036ce9dc7c 277 Gene3D G3DSA:2.60.130.10 43 234 7.3E-44 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 YPTB_RS17655 ee7f151c25f5e779e51a9f036ce9dc7c 277 PANTHER PTHR34315:SF1 1 277 2.5E-99 T 22-04-2016 YPTB_RS17655 ee7f151c25f5e779e51a9f036ce9dc7c 277 SUPERFAMILY SSF49482 42 261 1.16E-44 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 YPTB_RS17655 ee7f151c25f5e779e51a9f036ce9dc7c 277 PANTHER PTHR34315 1 277 2.5E-99 T 22-04-2016 YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 PANTHER PTHR30514:SF1 12 282 7.0E-109 T 22-04-2016 YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 Gene3D G3DSA:1.10.10.10 12 87 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 Pfam PF01380 SIS domain 138 265 1.6E-20 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 SUPERFAMILY SSF53697 105 289 1.26E-43 T 22-04-2016 YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 SUPERFAMILY SSF46689 12 87 1.25E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 86 4.3E-23 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 Gene3D G3DSA:3.40.50.10490 119 275 2.6E-43 T 22-04-2016 YPTB_RS14835 51f0682612b8b54ab4b570a4c8d269d6 292 PANTHER PTHR30514 12 282 7.0E-109 T 22-04-2016 YPTB_RS20720 5730ad83d91986287d94e5ae644bf1d7 159 Pfam PF00754 F5/8 type C domain 27 145 5.7E-18 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain YPTB_RS20720 5730ad83d91986287d94e5ae644bf1d7 159 Gene3D G3DSA:2.60.120.260 26 147 5.6E-21 T 22-04-2016 IPR008979 Galactose-binding domain-like YPTB_RS20720 5730ad83d91986287d94e5ae644bf1d7 159 SUPERFAMILY SSF49785 22 147 6.66E-22 T 22-04-2016 IPR008979 Galactose-binding domain-like YPTB_RS14110 12e4eff9b6fe0e7a3e7602564fb68ebe 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 85 3.8E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS14110 12e4eff9b6fe0e7a3e7602564fb68ebe 95 SUPERFAMILY SSF52794 1 89 7.06E-20 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS14110 12e4eff9b6fe0e7a3e7602564fb68ebe 95 Gene3D G3DSA:3.40.50.270 2 89 1.5E-12 T 22-04-2016 YPTB_RS14110 12e4eff9b6fe0e7a3e7602564fb68ebe 95 PANTHER PTHR33843 1 93 3.3E-23 T 22-04-2016 YPTB_RS14110 12e4eff9b6fe0e7a3e7602564fb68ebe 95 PANTHER PTHR33843:SF2 1 93 3.3E-23 T 22-04-2016 YPTB_RS01180 5ff21b5269d40889e69f0f9e9caf3bb0 221 PANTHER PTHR30055:SF40 11 208 2.9E-72 T 22-04-2016 YPTB_RS01180 5ff21b5269d40889e69f0f9e9caf3bb0 221 SUPERFAMILY SSF46689 19 80 4.37E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS01180 5ff21b5269d40889e69f0f9e9caf3bb0 221 Gene3D G3DSA:1.10.357.10 18 171 6.1E-17 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS01180 5ff21b5269d40889e69f0f9e9caf3bb0 221 PANTHER PTHR30055 11 208 2.9E-72 T 22-04-2016 YPTB_RS01180 5ff21b5269d40889e69f0f9e9caf3bb0 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 3.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS11010 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Gene3D G3DSA:1.25.40.10 188 258 7.7E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS11010 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.0E-44 T 22-04-2016 IPR032698 Protein SirB1, N-terminal YPTB_RS11010 ebc4341aa1df9cfc44a0ddb2bbe78611 269 PANTHER PTHR31350 24 265 3.2E-61 T 22-04-2016 YPTB_RS11010 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Pfam PF13371 Tetratricopeptide repeat 187 258 2.7E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS11010 ebc4341aa1df9cfc44a0ddb2bbe78611 269 SUPERFAMILY SSF48452 190 258 1.92E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS14485 679ea69dfd08ff45f828174809dba2d9 341 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 23 320 7.5E-83 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS14485 679ea69dfd08ff45f828174809dba2d9 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 321 3.4E-96 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS14485 679ea69dfd08ff45f828174809dba2d9 341 PANTHER PTHR35564 6 341 7.9E-252 T 22-04-2016 YPTB_RS14485 679ea69dfd08ff45f828174809dba2d9 341 PANTHER PTHR35564:SF1 6 341 7.9E-252 T 22-04-2016 YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 SUPERFAMILY SSF54534 8 205 2.81E-54 T 22-04-2016 YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 1.3E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.8E-22 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 PANTHER PTHR10516:SF320 86 205 3.7E-66 T 22-04-2016 YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 PANTHER PTHR10516:SF320 14 67 3.7E-66 T 22-04-2016 YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 Gene3D G3DSA:1.10.287.460 2 91 5.8E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 PANTHER PTHR10516 86 205 3.7E-66 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 PANTHER PTHR10516 14 67 3.7E-66 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPTB_RS02555 ba9705fcd711cae4966a3f909d1e0f39 206 Gene3D G3DSA:3.10.50.40 92 205 4.2E-48 T 22-04-2016 YPTB_RS15140 3d1db63804d07391b1792fa14a99170e 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS15140 3d1db63804d07391b1792fa14a99170e 212 PANTHER PTHR10520 1 194 4.3E-116 T 22-04-2016 YPTB_RS15140 3d1db63804d07391b1792fa14a99170e 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 32.136 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 YPTB_RS15140 3d1db63804d07391b1792fa14a99170e 212 Gene3D G3DSA:3.40.50.170 1 195 1.2E-72 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS15140 3d1db63804d07391b1792fa14a99170e 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 3.4E-81 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 YPTB_RS15140 3d1db63804d07391b1792fa14a99170e 212 Pfam PF00551 Formyl transferase 2 182 7.0E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS15140 3d1db63804d07391b1792fa14a99170e 212 SUPERFAMILY SSF53328 2 201 2.22E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 274 45.871 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 PANTHER PTHR18895 1 274 3.0E-117 T 22-04-2016 YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 Gene3D G3DSA:3.40.50.150 87 274 6.9E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 SUPERFAMILY SSF53335 3 272 2.45E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 PANTHER PTHR18895:SF64 1 274 3.0E-117 T 22-04-2016 YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 8.4E-89 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 Pfam PF13847 Methyltransferase domain 111 247 9.0E-22 T 22-04-2016 IPR025714 Methyltransferase domain YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 Gene3D G3DSA:1.10.8.10 1 84 2.7E-27 T 22-04-2016 YPTB_RS11000 b3e621c6db1a97d7af6871051fea0ca4 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 2.6E-89 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YPTB_RS16970 1f47bc905fdfd8f8f551a579b9309595 116 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 1 102 1.0E-54 T 22-04-2016 YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 SUPERFAMILY SSF51735 1 318 2.32E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 Gene3D G3DSA:3.40.50.720 1 168 3.6E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 Gene3D G3DSA:3.40.50.720 210 258 3.6E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 PANTHER PTHR10366 5 313 2.0E-137 T 22-04-2016 YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 48.846 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 Gene3D G3DSA:3.90.25.10 259 305 5.1E-38 T 22-04-2016 YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 Gene3D G3DSA:3.90.25.10 169 209 5.1E-38 T 22-04-2016 YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 233 2.6E-75 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS05575 01449c0cccf5695c74357fe33438884f 321 PANTHER PTHR10366:SF246 5 313 2.0E-137 T 22-04-2016 YPTB_RS12245 b656dcc0445635f51d95774152e4a74c 123 Pfam PF07027 Protein of unknown function (DUF1318) 35 123 6.2E-30 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 YPTB_RS12245 b656dcc0445635f51d95774152e4a74c 123 PIRSF PIRSF025560 1 123 1.0E-44 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 SUPERFAMILY SSF161098 300 586 6.35E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 Gene3D G3DSA:1.10.3720.10 14 279 1.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 PANTHER PTHR30193 1 288 2.5E-185 T 22-04-2016 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 PANTHER PTHR30193:SF14 1 288 2.5E-185 T 22-04-2016 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 381 577 5.8E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 276 1.5E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 SUPERFAMILY SSF161098 5 282 1.78E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15015 4c7b851931abb441dc2ddc55af9b9095 589 Gene3D G3DSA:1.10.3720.10 299 575 2.8E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12060 7595059b8022c42edf15f8e2ae8e09f4 272 PANTHER PTHR24220:SF10 17 262 4.5E-93 T 22-04-2016 YPTB_RS12060 7595059b8022c42edf15f8e2ae8e09f4 272 SUPERFAMILY SSF52540 16 248 5.74E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12060 7595059b8022c42edf15f8e2ae8e09f4 272 Gene3D G3DSA:3.40.50.300 12 230 1.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12060 7595059b8022c42edf15f8e2ae8e09f4 272 Pfam PF00005 ABC transporter 35 174 6.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12060 7595059b8022c42edf15f8e2ae8e09f4 272 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS12060 7595059b8022c42edf15f8e2ae8e09f4 272 PANTHER PTHR24220 17 262 4.5E-93 T 22-04-2016 YPTB_RS12060 7595059b8022c42edf15f8e2ae8e09f4 272 SMART SM00382 44 223 1.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 PANTHER PTHR30605 1 370 3.8E-286 T 22-04-2016 YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 SUPERFAMILY SSF53067 66 111 8.85E-28 T 22-04-2016 YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 SUPERFAMILY SSF53067 6 36 8.85E-28 T 22-04-2016 YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 SUPERFAMILY SSF53067 143 341 8.85E-28 T 22-04-2016 YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 PANTHER PTHR30605:SF2 1 370 3.8E-286 T 22-04-2016 YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 366 3.0E-163 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 Gene3D G3DSA:3.30.420.40 5 196 2.9E-72 T 22-04-2016 YPTB_RS12455 80fd90e18e706b221cbedcec303435e3 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.236 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 SUPERFAMILY SSF52402 24 208 1.29E-51 T 22-04-2016 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 PIRSF PIRSF000857 3 244 2.8E-53 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 PANTHER PTHR23293:SF5 9 244 1.9E-92 T 22-04-2016 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 4.1E-48 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 Gene3D G3DSA:3.40.50.620 11 216 3.6E-60 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 24 242 1.1E-93 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.292 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.4E-87 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YPTB_RS04230 2ef882674b9d6a8aa934ff9dc1a11d66 244 PANTHER PTHR23293 9 244 1.9E-92 T 22-04-2016 YPTB_RS08560 6377f52f90382ea2df5efac1bbe4999c 245 SUPERFAMILY SSF51366 1 242 6.53E-66 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS08560 6377f52f90382ea2df5efac1bbe4999c 245 PANTHER PTHR21235 1 244 1.6E-116 T 22-04-2016 YPTB_RS08560 6377f52f90382ea2df5efac1bbe4999c 245 PANTHER PTHR21235:SF15 1 244 1.6E-116 T 22-04-2016 YPTB_RS08560 6377f52f90382ea2df5efac1bbe4999c 245 Pfam PF00977 Histidine biosynthesis protein 1 233 3.3E-77 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 YPTB_RS08560 6377f52f90382ea2df5efac1bbe4999c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.291 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 YPTB_RS08560 6377f52f90382ea2df5efac1bbe4999c 245 Gene3D G3DSA:3.20.20.70 1 243 4.7E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS08560 6377f52f90382ea2df5efac1bbe4999c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 3.9E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 YPTB_RS09050 0b7c62ec4dc46309f2dd2115bc672eb8 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 6.1E-134 T 22-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 YPTB_RS09050 0b7c62ec4dc46309f2dd2115bc672eb8 267 PANTHER PTHR30143 1 267 2.3E-103 T 22-04-2016 YPTB_RS09050 0b7c62ec4dc46309f2dd2115bc672eb8 267 SUPERFAMILY SSF56529 4 267 1.23E-75 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS09050 0b7c62ec4dc46309f2dd2115bc672eb8 267 Gene3D G3DSA:3.90.850.10 2 267 1.2E-82 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS12300 f6457c2f02520a89b797e97517081d96 279 PANTHER PTHR30204:SF5 1 279 1.2E-156 T 22-04-2016 YPTB_RS12300 f6457c2f02520a89b797e97517081d96 279 Pfam PF13411 MerR HTH family regulatory protein 2 67 9.1E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS12300 f6457c2f02520a89b797e97517081d96 279 Gene3D G3DSA:3.20.80.10 154 256 5.7E-9 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPTB_RS12300 f6457c2f02520a89b797e97517081d96 279 SUPERFAMILY SSF46955 1 103 6.87E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain YPTB_RS12300 f6457c2f02520a89b797e97517081d96 279 PANTHER PTHR30204 1 279 1.2E-156 T 22-04-2016 YPTB_RS12300 f6457c2f02520a89b797e97517081d96 279 Gene3D G3DSA:1.10.1660.10 1 104 1.4E-17 T 22-04-2016 YPTB_RS12300 f6457c2f02520a89b797e97517081d96 279 SMART SM00422 2 70 1.9E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPTB_RS14580 b4db0443115485606f2fb1e1ddfba28f 189 Pfam PF12838 4Fe-4S dicluster domain 67 118 1.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS14580 b4db0443115485606f2fb1e1ddfba28f 189 Gene3D G3DSA:3.30.70.20 109 187 3.4E-10 T 22-04-2016 YPTB_RS14580 b4db0443115485606f2fb1e1ddfba28f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS14580 b4db0443115485606f2fb1e1ddfba28f 189 Pfam PF00037 4Fe-4S binding domain 165 185 7.0E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS14580 b4db0443115485606f2fb1e1ddfba28f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS14580 b4db0443115485606f2fb1e1ddfba28f 189 Gene3D G3DSA:3.30.70.20 65 108 1.3E-10 T 22-04-2016 YPTB_RS14580 b4db0443115485606f2fb1e1ddfba28f 189 SUPERFAMILY SSF54862 59 187 1.79E-18 T 22-04-2016 YPTB_RS11880 951e383ff1e011697b668a7cd4c7cf82 349 PANTHER PTHR32196 13 349 5.1E-251 T 22-04-2016 YPTB_RS11880 951e383ff1e011697b668a7cd4c7cf82 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 79 336 3.4E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS11880 951e383ff1e011697b668a7cd4c7cf82 349 PANTHER PTHR32196:SF37 13 349 5.1E-251 T 22-04-2016 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PANTHER PTHR30070 1 219 6.6E-77 T 22-04-2016 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 Pfam PF03379 CcmB protein 3 216 4.5E-93 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PANTHER PTHR30070:SF1 1 219 6.6E-77 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 1.6E-96 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPTB_RS14350 3c62885123e84e23ec2983e4f93724f2 219 PIRSF PIRSF002764 1 219 8.0E-87 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPTB_RS17355 f6d0915647c37404637624f7beee9472 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.349 T 22-04-2016 IPR023483 Uncharacterised protein family SprT YPTB_RS17355 f6d0915647c37404637624f7beee9472 170 SMART SM00731 16 165 5.2E-68 T 22-04-2016 IPR006640 SprT-like YPTB_RS17355 f6d0915647c37404637624f7beee9472 170 PANTHER PTHR38773 2 170 5.6E-95 T 22-04-2016 YPTB_RS17355 f6d0915647c37404637624f7beee9472 170 Pfam PF10263 SprT-like family 21 165 1.1E-27 T 22-04-2016 IPR006640 SprT-like YPTB_RS14225 6c73359c526560ca9f376b022da7bf19 345 PIRSF PIRSF020588 1 344 2.5E-154 T 22-04-2016 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 YPTB_RS02310 66039974d026c30f5d9f831cba941566 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 3.1E-195 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPTB_RS02310 66039974d026c30f5d9f831cba941566 433 PIRSF PIRSF004539 1 433 3.3E-175 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPTB_RS02310 66039974d026c30f5d9f831cba941566 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 3.1E-142 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPTB_RS02310 66039974d026c30f5d9f831cba941566 433 PANTHER PTHR36106 1 433 0.0 T 22-04-2016 YPTB_RS02310 66039974d026c30f5d9f831cba941566 433 PANTHER PTHR36106:SF2 1 433 0.0 T 22-04-2016 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 PIRSF PIRSF001892 15 504 6.7E-175 T 22-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 Pfam PF02321 Outer membrane efflux protein 307 495 4.7E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 Pfam PF02321 Outer membrane efflux protein 87 280 1.1E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 PANTHER PTHR30203 1 497 0.0 T 22-04-2016 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 PANTHER PTHR30203:SF8 1 497 0.0 T 22-04-2016 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 SUPERFAMILY SSF56954 77 497 1.44E-74 T 22-04-2016 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 SUPERFAMILY SSF56954 12 45 1.44E-74 T 22-04-2016 YPTB_RS18605 2cf3a24462016e990c21646a17252b10 508 Gene3D G3DSA:1.20.1600.10 75 498 5.3E-72 T 22-04-2016 YPTB_RS11590 7a59cf57c1a553702523c5e5c7e4156d 180 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.59 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YPTB_RS11590 7a59cf57c1a553702523c5e5c7e4156d 180 PANTHER PTHR36917:SF1 1 180 3.7E-85 T 22-04-2016 YPTB_RS11590 7a59cf57c1a553702523c5e5c7e4156d 180 Pfam PF04279 Intracellular septation protein A 1 175 1.8E-71 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YPTB_RS11590 7a59cf57c1a553702523c5e5c7e4156d 180 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 1.9E-71 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YPTB_RS11590 7a59cf57c1a553702523c5e5c7e4156d 180 PANTHER PTHR36917 1 180 3.7E-85 T 22-04-2016 YPTB_RS02110 1aea7f4244a3f5570e135366b9d58312 439 Gene3D G3DSA:3.90.10.10 62 90 6.5E-4 T 22-04-2016 YPTB_RS02110 1aea7f4244a3f5570e135366b9d58312 439 Gene3D G3DSA:3.90.10.10 124 201 6.5E-4 T 22-04-2016 YPTB_RS02110 1aea7f4244a3f5570e135366b9d58312 439 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 86 106 - T 22-04-2016 IPR007087 Zinc finger, C2H2 GO:0046872 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 150 2.2E-6 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 Gene3D G3DSA:3.30.420.40 294 554 1.1E-43 T 22-04-2016 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 PANTHER PTHR10196 1 567 0.0 T 22-04-2016 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 SUPERFAMILY SSF53067 13 293 1.14E-21 T 22-04-2016 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 SUPERFAMILY SSF53067 294 557 4.66E-43 T 22-04-2016 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 Gene3D G3DSA:3.30.420.40 12 291 2.7E-30 T 22-04-2016 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 300 510 6.8E-36 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 11 557 2.0E-224 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 Hamap MF_00520 Ribulokinase [araB]. 10 567 52.222 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 YPTB_RS11865 c00c1f3d710369674fd5c6d9b4a38ffc 567 PANTHER PTHR10196:SF62 1 567 0.0 T 22-04-2016 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 SUPERFAMILY SSF56935 22 371 1.28E-79 T 22-04-2016 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PANTHER PTHR34501:SF3 2 371 1.8E-276 T 22-04-2016 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 PANTHER PTHR34501 2 371 1.8E-276 T 22-04-2016 YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 Gene3D G3DSA:2.40.160.10 22 371 1.1E-104 T 22-04-2016 IPR023614 Porin domain YPTB_RS06880 54bfbdf1c48f66eb256e729ef4375cd1 371 Pfam PF00267 Gram-negative porin 27 371 5.8E-144 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPTB_RS18625 53b466806263f11a2db88c85bfc126ef 293 PANTHER PTHR32243 1 292 3.2E-107 T 22-04-2016 YPTB_RS18625 53b466806263f11a2db88c85bfc126ef 293 PANTHER PTHR32243:SF13 1 292 3.2E-107 T 22-04-2016 YPTB_RS18625 53b466806263f11a2db88c85bfc126ef 293 Gene3D G3DSA:1.10.3720.10 60 290 1.0E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS18625 53b466806263f11a2db88c85bfc126ef 293 SUPERFAMILY SSF161098 52 281 5.89E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS18625 53b466806263f11a2db88c85bfc126ef 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 283 9.7E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 2.1E-92 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 6.389286E-37 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 6.389286E-37 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 6.389286E-37 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.389286E-37 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.389286E-37 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 6.389286E-37 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 SUPERFAMILY SSF52317 1 190 5.24E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 8.0E-54 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 Gene3D G3DSA:3.40.50.880 2 190 1.6E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PANTHER PTHR11922:SF7 1 190 2.1E-93 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PANTHER PTHR11922 1 190 2.1E-93 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.904756E-14 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.904756E-14 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.904756E-14 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.8547E-6 T 22-04-2016 YPTB_RS20185 6f8edda5c18874c761088eef5570c9aa 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.8547E-6 T 22-04-2016 YPTB_RS07095 b83b8c8ce6dbed27af826198b7dcc79c 351 Gene3D G3DSA:3.55.50.10 103 175 5.2E-28 T 22-04-2016 YPTB_RS07095 b83b8c8ce6dbed27af826198b7dcc79c 351 SUPERFAMILY SSF69279 176 349 7.37E-42 T 22-04-2016 YPTB_RS07095 b83b8c8ce6dbed27af826198b7dcc79c 351 Pfam PF05954 Phage late control gene D protein (GPD) 26 324 1.0E-15 T 22-04-2016 YPTB_RS07095 b83b8c8ce6dbed27af826198b7dcc79c 351 Gene3D G3DSA:2.30.300.10 282 350 1.7E-63 T 22-04-2016 YPTB_RS07095 b83b8c8ce6dbed27af826198b7dcc79c 351 Gene3D G3DSA:2.30.300.10 1 102 1.7E-63 T 22-04-2016 YPTB_RS07095 b83b8c8ce6dbed27af826198b7dcc79c 351 PIRSF PIRSF004440 1 351 4.3E-67 T 22-04-2016 IPR026276 Baseplate protein GpP YPTB_RS07095 b83b8c8ce6dbed27af826198b7dcc79c 351 SUPERFAMILY SSF69279 1 175 1.36E-51 T 22-04-2016 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 SUPERFAMILY SSF52540 197 372 2.52E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 SUPERFAMILY SSF52540 72 163 2.52E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Gene3D G3DSA:3.40.50.300 211 247 6.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 PANTHER PTHR11649:SF56 8 454 5.8E-177 T 22-04-2016 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 PANTHER PTHR11649 8 454 5.8E-177 T 22-04-2016 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.2 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Gene3D G3DSA:1.20.120.430 122 182 2.8E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Gene3D G3DSA:1.20.120.430 248 271 2.8E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Gene3D G3DSA:1.20.120.430 384 454 2.8E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Gene3D G3DSA:3.30.1360.120 1 121 1.0E-41 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Pfam PF12631 MnmE helical domain 123 451 2.6E-60 T 22-04-2016 IPR025867 MnmE, helical domain YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Gene3D G3DSA:3.40.50.300 286 376 8.2E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.4E-100 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 6.1E-34 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 SUPERFAMILY SSF116878 379 454 2.35E-51 T 22-04-2016 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 SUPERFAMILY SSF116878 121 220 2.35E-51 T 22-04-2016 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 Pfam PF01926 50S ribosome-binding GTPase 218 310 2.9E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS21320 4950784e9bf4aaa8938c601f01d0960a 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 7.8E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS13160 36204f46c18b4e330104662c05da1d0e 299 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 25 298 2.8E-113 T 22-04-2016 IPR021266 Kdo hydroxylase YPTB_RS20700 67b1061026b728e824b8d1b851256f06 66 PANTHER PTHR35530:SF1 1 66 5.2E-27 T 22-04-2016 YPTB_RS20700 67b1061026b728e824b8d1b851256f06 66 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 3.5E-30 T 22-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 YPTB_RS20700 67b1061026b728e824b8d1b851256f06 66 PANTHER PTHR35530 1 66 5.2E-27 T 22-04-2016 YPTB_RS20700 67b1061026b728e824b8d1b851256f06 66 SUPERFAMILY SSF55331 2 64 3.38E-23 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily YPTB_RS20700 67b1061026b728e824b8d1b851256f06 66 Gene3D G3DSA:3.30.429.20 1 61 4.9E-30 T 22-04-2016 YPTB_RS20700 67b1061026b728e824b8d1b851256f06 66 Pfam PF01361 Tautomerase enzyme 2 61 2.3E-24 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 YPTB_RS13410 e3fbcc78e38e62daf3907ecc38f627f5 341 Gene3D G3DSA:3.30.160.60 304 340 5.4E-19 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YPTB_RS13410 e3fbcc78e38e62daf3907ecc38f627f5 341 PANTHER PTHR30518 8 341 1.3E-100 T 22-04-2016 YPTB_RS13410 e3fbcc78e38e62daf3907ecc38f627f5 341 Pfam PF02618 YceG-like family 44 329 5.3E-83 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like YPTB_RS13410 e3fbcc78e38e62daf3907ecc38f627f5 341 Gene3D G3DSA:3.30.160.60 72 110 2.7E-24 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YPTB_RS13410 e3fbcc78e38e62daf3907ecc38f627f5 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 337 4.6E-123 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like YPTB_RS13410 e3fbcc78e38e62daf3907ecc38f627f5 341 PANTHER PTHR30518:SF2 8 341 1.3E-100 T 22-04-2016 YPTB_RS02560 5ec2aa88530d760c977224c092e09b57 221 PANTHER PTHR36438 1 221 9.1E-109 T 22-04-2016 YPTB_RS02560 5ec2aa88530d760c977224c092e09b57 221 Gene3D G3DSA:1.20.120.520 80 218 4.9E-27 T 22-04-2016 YPTB_RS02560 5ec2aa88530d760c977224c092e09b57 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 1.4E-81 T 22-04-2016 IPR019903 Repair of iron centres family YPTB_RS02560 5ec2aa88530d760c977224c092e09b57 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 59 6.9E-20 T 22-04-2016 IPR019903 Repair of iron centres family YPTB_RS02560 5ec2aa88530d760c977224c092e09b57 221 Pfam PF01814 Hemerythrin HHE cation binding domain 81 217 3.1E-27 T 22-04-2016 IPR012312 Haemerythrin-like YPTB_RS02560 5ec2aa88530d760c977224c092e09b57 221 PANTHER PTHR36438:SF1 1 221 9.1E-109 T 22-04-2016 YPTB_RS02560 5ec2aa88530d760c977224c092e09b57 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 47.619 T 22-04-2016 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 YPTB_RS09620 6d57e8ffa99badaf727255a93ccb0739 202 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 1.4E-50 T 22-04-2016 IPR006521 Tail protein I YPTB_RS09620 6d57e8ffa99badaf727255a93ccb0739 202 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 141 2.0E-58 T 22-04-2016 IPR006521 Tail protein I YPTB_RS11380 885f186bf0a4e8e7d94cbd7cec625d53 372 Pfam PF00892 EamA-like transporter family 163 291 8.7E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS11380 885f186bf0a4e8e7d94cbd7cec625d53 372 Pfam PF00892 EamA-like transporter family 10 144 3.5E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS11380 885f186bf0a4e8e7d94cbd7cec625d53 372 SUPERFAMILY SSF103481 58 147 4.18E-11 T 22-04-2016 YPTB_RS11380 885f186bf0a4e8e7d94cbd7cec625d53 372 SUPERFAMILY SSF103481 206 296 5.49E-6 T 22-04-2016 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Gene3D G3DSA:2.60.40.1070 147 237 1.0E-10 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 143 7.7E-41 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 SUPERFAMILY SSF49584 137 237 8.11E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PANTHER PTHR30251:SF7 1 245 3.5E-139 T 22-04-2016 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Gene3D G3DSA:2.60.40.360 21 144 2.3E-39 T 22-04-2016 IPR008962 PapD-like YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PANTHER PTHR30251 1 245 3.5E-139 T 22-04-2016 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 98 115 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 70 91 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 164 179 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 21 30 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 125 140 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 SUPERFAMILY SSF49354 17 143 2.12E-38 T 22-04-2016 IPR008962 PapD-like YPTB_RS10530 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 236 5.3E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS16230 b977fb34b6fab30544aae4887916a387 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 2.7E-101 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPTB_RS16230 b977fb34b6fab30544aae4887916a387 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 2.0E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPTB_RS16230 b977fb34b6fab30544aae4887916a387 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 YPTB_RS16230 b977fb34b6fab30544aae4887916a387 252 PANTHER PTHR10291 16 243 6.9E-118 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPTB_RS16230 b977fb34b6fab30544aae4887916a387 252 SUPERFAMILY SSF64005 14 238 4.71E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPTB_RS16230 b977fb34b6fab30544aae4887916a387 252 Gene3D G3DSA:3.40.1180.10 14 244 1.9E-94 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPTB_RS16230 b977fb34b6fab30544aae4887916a387 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.842 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPTB_RS08750 3ef987a9c575c3d36a7d0b8a6dec8af4 61 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 8.5E-26 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) YPTB_RS08750 3ef987a9c575c3d36a7d0b8a6dec8af4 61 PANTHER PTHR36154 1 58 1.4E-16 T 22-04-2016 YPTB_RS04630 dbd4d14c4f862596aa706247fcd02bea 82 PANTHER PTHR12919 1 78 6.1E-41 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04630 dbd4d14c4f862596aa706247fcd02bea 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.711 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04630 dbd4d14c4f862596aa706247fcd02bea 82 Gene3D G3DSA:3.30.1320.10 1 79 2.9E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain YPTB_RS04630 dbd4d14c4f862596aa706247fcd02bea 82 SUPERFAMILY SSF54565 1 76 1.96E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain YPTB_RS04630 dbd4d14c4f862596aa706247fcd02bea 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04630 dbd4d14c4f862596aa706247fcd02bea 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.1E-28 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS04630 dbd4d14c4f862596aa706247fcd02bea 82 Pfam PF00886 Ribosomal protein S16 8 68 3.1E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 PANTHER PTHR30386 30 430 3.5E-136 T 22-04-2016 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 Gene3D G3DSA:2.40.50.100 72 103 2.1E-13 T 22-04-2016 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 Gene3D G3DSA:2.40.50.100 262 296 2.1E-13 T 22-04-2016 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 276 297 3.4E-10 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 334 3.4E-10 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.4E-10 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 Pfam PF13437 HlyD family secretion protein 265 358 1.3E-11 T 22-04-2016 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 PANTHER PTHR30386:SF8 30 430 3.5E-136 T 22-04-2016 YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 SUPERFAMILY SSF51230 65 106 4.71E-5 T 22-04-2016 IPR011053 Single hybrid motif YPTB_RS00555 de858a3085e4acc6d839932fcdd180d3 430 ProSitePatterns PS00543 HlyD family secretion proteins signature. 392 414 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YPTB_RS10665 85716c1e149e0c5d422c29acf3f4d229 382 Pfam PF12704 MacB-like periplasmic core domain 35 198 3.5E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPTB_RS10665 85716c1e149e0c5d422c29acf3f4d229 382 PANTHER PTHR30489 13 382 3.2E-56 T 22-04-2016 YPTB_RS10665 85716c1e149e0c5d422c29acf3f4d229 382 Pfam PF02687 FtsX-like permease family 261 375 2.9E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS17765 00ae633d6d21662b401ef786a8b45921 439 SUPERFAMILY SSF48452 260 407 4.11E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS17765 00ae633d6d21662b401ef786a8b45921 439 Gene3D G3DSA:1.25.40.10 235 422 4.6E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 Pfam PF02253 Phospholipase A1 43 288 1.7E-98 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 Gene3D G3DSA:2.40.230.10 37 291 6.5E-104 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PANTHER PTHR40457 1 292 2.1E-176 T 22-04-2016 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 SUPERFAMILY SSF56931 39 291 1.83E-94 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 256 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 281 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS01210 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 PIRSF PIRSF002741 6 538 2.3E-112 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 PANTHER PTHR30290:SF23 11 538 0.0 T 22-04-2016 YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 PANTHER PTHR30290 11 538 0.0 T 22-04-2016 YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 Gene3D G3DSA:3.10.105.10 306 505 8.1E-65 T 22-04-2016 YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 SUPERFAMILY SSF53850 32 526 4.6E-140 T 22-04-2016 YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 Gene3D G3DSA:3.40.190.10 154 305 2.8E-51 T 22-04-2016 YPTB_RS12310 c419e214ad182a0a685bcfb289500bcc 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 453 1.8E-86 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 SUPERFAMILY SSF53686 8 328 3.4E-85 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 Gene3D G3DSA:3.40.50.1100 113 327 2.3E-67 T 22-04-2016 YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 PIRSF PIRSF006278 1 330 1.2E-94 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 PANTHER PTHR10314:SF105 1 319 3.8E-173 T 22-04-2016 YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 318 2.4E-52 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 330 64.069 T 22-04-2016 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 PANTHER PTHR10314 1 319 3.8E-173 T 22-04-2016 YPTB_RS09440 5bebda488e92ce3f97b530a68bc8460d 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 330 2.9E-126 T 22-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 YPTB_RS00940 271b8f2dd4037f66e2d235185f3575ba 123 Pfam PF06530 Phage antitermination protein Q 4 121 1.1E-31 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YPTB_RS19920 59daddab34c70f927432b384a57d2e31 144 SUPERFAMILY SSF52080 4 143 7.72E-47 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P YPTB_RS19920 59daddab34c70f927432b384a57d2e31 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.0E-52 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19920 59daddab34c70f927432b384a57d2e31 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19920 59daddab34c70f927432b384a57d2e31 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.307 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 YPTB_RS19920 59daddab34c70f927432b384a57d2e31 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.7E-31 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P YPTB_RS19920 59daddab34c70f927432b384a57d2e31 144 PANTHER PTHR12934 1 144 4.6E-77 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPTB_RS19920 59daddab34c70f927432b384a57d2e31 144 Gene3D G3DSA:3.100.10.10 32 143 9.9E-26 T 22-04-2016 YPTB_RS01020 b18deb4cbc75b886cf6cd7abd91020df 360 PANTHER PTHR22926:SF3 8 353 4.7E-113 T 22-04-2016 YPTB_RS01020 b18deb4cbc75b886cf6cd7abd91020df 360 PANTHER PTHR22926 8 353 4.7E-113 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS01020 b18deb4cbc75b886cf6cd7abd91020df 360 Pfam PF00953 Glycosyl transferase family 4 70 227 9.6E-28 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS01020 b18deb4cbc75b886cf6cd7abd91020df 360 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 28.608 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 YPTB_RS01020 b18deb4cbc75b886cf6cd7abd91020df 360 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 1.5E-164 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 141 174 2.2E-15 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 291 3.7E-142 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 PANTHER PTHR11938 1 206 2.9E-158 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:1.20.5.480 249 294 4.0E-27 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 Pfam PF09163 Formate dehydrogenase N, transmembrane 248 291 5.5E-23 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 PANTHER PTHR11938:SF84 1 206 2.9E-158 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 SUPERFAMILY SSF54862 29 275 9.63E-70 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 31 105 1.6E-36 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 175 229 1.6E-36 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 106 140 2.7E-11 T 22-04-2016 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 PIRSF PIRSF036298 1 320 3.8E-168 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 135 146 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS21210 4bd4d7dd9822d8c2cd7d624ebc957273 323 Pfam PF13247 4Fe-4S dicluster domain 94 190 7.4E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PANTHER PTHR24322:SF459 14 142 5.7E-57 T 22-04-2016 YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PANTHER PTHR24322:SF459 158 190 5.7E-57 T 22-04-2016 YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 SUPERFAMILY SSF51735 8 252 1.65E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 Pfam PF00106 short chain dehydrogenase 11 203 2.0E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PANTHER PTHR24322 14 142 5.7E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 PANTHER PTHR24322 158 190 5.7E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS13955 847cc8d882efd5a9e9a8bfa8ecf4d016 254 Gene3D G3DSA:3.40.50.720 4 252 1.5E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05865 6782b50e89ed373e5fc8fdc8daff4023 159 Pfam PF05638 Type VI secretion system effector, Hcp 28 143 4.1E-23 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS05865 6782b50e89ed373e5fc8fdc8daff4023 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 1.0E-60 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS05865 6782b50e89ed373e5fc8fdc8daff4023 159 SUPERFAMILY SSF141452 26 158 1.44E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS05865 6782b50e89ed373e5fc8fdc8daff4023 159 PANTHER PTHR34319 1 159 1.2E-81 T 22-04-2016 YPTB_RS05865 6782b50e89ed373e5fc8fdc8daff4023 159 Gene3D G3DSA:2.30.110.20 11 152 4.9E-21 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 Gene3D G3DSA:3.20.20.70 38 363 1.1E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 SMART SM00876 259 362 4.6E-32 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 SUPERFAMILY SSF102114 38 364 1.44E-54 T 22-04-2016 YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 1.4E-165 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 Pfam PF04055 Radical SAM superfamily 83 220 2.2E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 PANTHER PTHR22976 1 374 5.5E-232 T 22-04-2016 YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 PANTHER PTHR22976:SF17 1 374 5.5E-232 T 22-04-2016 YPTB_RS01695 65efb76c51b851bfb9c158c2bf212ae9 376 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 1.2E-23 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPTB_RS09840 ce4b95cf29a375e01332b00a6664dcb3 89 Pfam PF13619 KTSC domain 13 72 1.2E-19 T 22-04-2016 IPR025309 KTSC domain YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 SMART SM00382 54 181 1.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 4.6E-149 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 PANTHER PTHR13779:SF25 1 334 2.7E-193 T 22-04-2016 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 SUPERFAMILY SSF52540 23 255 4.07E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 8.1E-118 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 185.486 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:1.10.8.60 186 258 3.6E-32 T 22-04-2016 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 7.0E-42 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:3.40.50.300 23 178 7.7E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.1E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:1.10.10.10 260 330 1.1E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 PANTHER PTHR13779 1 334 2.7E-193 T 22-04-2016 YPTB_RS11190 054eb81548425a83568a9c3c66137996 334 SUPERFAMILY SSF46785 260 331 3.27E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 SUPERFAMILY SSF51011 477 553 1.5E-17 T 22-04-2016 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.90.400.10 107 177 1.6E-28 T 22-04-2016 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 Pfam PF00128 Alpha amylase, catalytic domain 30 374 2.0E-121 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:2.60.40.1180 478 552 2.3E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 SMART SM00642 15 416 7.3E-154 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357 1 388 7.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357 453 553 7.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357 409 421 7.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 552 2.9E-248 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357:SF142 1 388 7.7E-251 T 22-04-2016 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357:SF142 453 553 7.7E-251 T 22-04-2016 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357:SF142 409 421 7.7E-251 T 22-04-2016 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 Pfam PF11941 Domain of unknown function (DUF3459) 461 536 8.6E-5 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.20.20.80 5 106 2.0E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.20.20.80 178 475 2.0E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS19140 5b39ca157dae606654a1865590905ddc 555 SUPERFAMILY SSF51445 5 474 4.37E-151 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS11690 2b25ad630e90fa094f10b62eae337fe3 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 2.5E-44 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 YPTB_RS09630 768f46971a7390294296f1eab163ee53 116 PANTHER PTHR35862 5 114 9.8E-35 T 22-04-2016 YPTB_RS09630 768f46971a7390294296f1eab163ee53 116 SUPERFAMILY SSF160719 14 115 3.79E-30 T 22-04-2016 YPTB_RS09630 768f46971a7390294296f1eab163ee53 116 Gene3D G3DSA:3.10.450.40 11 115 4.6E-38 T 22-04-2016 YPTB_RS09630 768f46971a7390294296f1eab163ee53 116 PANTHER PTHR35862:SF2 5 114 9.8E-35 T 22-04-2016 YPTB_RS09630 768f46971a7390294296f1eab163ee53 116 Pfam PF04965 Gene 25-like lysozyme 20 103 1.9E-15 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 PANTHER PTHR23133 10 97 4.7E-185 T 22-04-2016 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 PANTHER PTHR23133 163 355 4.7E-185 T 22-04-2016 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 1.3E-76 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 8.5E-24 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 SUPERFAMILY SSF54211 167 251 5.31E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 Gene3D G3DSA:3.30.230.40 258 355 2.6E-31 T 22-04-2016 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 57.056 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 Gene3D G3DSA:3.40.50.1000 1 160 5.3E-40 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 5.0E-44 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 PANTHER PTHR23133:SF2 10 97 4.7E-185 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 PANTHER PTHR23133:SF2 163 355 4.7E-185 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 SUPERFAMILY SSF54211 252 342 2.28E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 Pfam PF13242 HAD-hyrolase-like 103 146 1.0E-4 T 22-04-2016 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 Gene3D G3DSA:3.30.230.40 167 253 7.9E-37 T 22-04-2016 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.127 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 SUPERFAMILY SSF56784 1 157 1.76E-36 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPTB_RS08570 e6f0d148bfe5daebe3ba450b74bcfd2c 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.1E-63 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPTB_RS20995 8ccc61023c1735ea91bd5e0b79acfd09 404 Pfam PF00589 Phage integrase family 206 370 4.7E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS20995 8ccc61023c1735ea91bd5e0b79acfd09 404 Gene3D G3DSA:1.10.150.130 98 194 3.5E-17 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPTB_RS20995 8ccc61023c1735ea91bd5e0b79acfd09 404 PANTHER PTHR30629 1 393 1.4E-229 T 22-04-2016 YPTB_RS20995 8ccc61023c1735ea91bd5e0b79acfd09 404 Gene3D G3DSA:1.10.443.10 206 376 1.6E-25 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPTB_RS20995 8ccc61023c1735ea91bd5e0b79acfd09 404 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 1.9E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPTB_RS20995 8ccc61023c1735ea91bd5e0b79acfd09 404 SUPERFAMILY SSF56349 98 380 6.18E-63 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPTB_RS20995 8ccc61023c1735ea91bd5e0b79acfd09 404 PANTHER PTHR30629:SF3 1 393 1.4E-229 T 22-04-2016 YPTB_RS09700 9afeaf25ca2c0b8c19ab41330a4ef30c 345 Pfam PF04860 Phage portal protein 92 326 6.0E-15 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein YPTB_RS09700 9afeaf25ca2c0b8c19ab41330a4ef30c 345 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 54 334 2.8E-86 T 22-04-2016 IPR006430 Phage portal protein PBSX family YPTB_RS09700 9afeaf25ca2c0b8c19ab41330a4ef30c 345 PIRSF PIRSF018494 1 345 8.8E-158 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTB_RS12925 59c96ed54f68a2d0c5f2b64266702dc0 293 PANTHER PTHR10120:SF19 1 288 1.3E-114 T 22-04-2016 YPTB_RS12925 59c96ed54f68a2d0c5f2b64266702dc0 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 25.994 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 YPTB_RS12925 59c96ed54f68a2d0c5f2b64266702dc0 293 Pfam PF01435 Peptidase family M48 74 288 5.5E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPTB_RS12925 59c96ed54f68a2d0c5f2b64266702dc0 293 PANTHER PTHR10120 1 288 1.3E-114 T 22-04-2016 YPTB_RS12925 59c96ed54f68a2d0c5f2b64266702dc0 293 Gene3D G3DSA:3.30.2010.10 69 156 4.4E-32 T 22-04-2016 YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 SUPERFAMILY SSF55811 2 132 7.18E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 PANTHER PTHR22769:SF14 1 145 8.9E-36 T 22-04-2016 YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 PANTHER PTHR22769 1 145 8.9E-36 T 22-04-2016 YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 Pfam PF00293 NUDIX domain 4 115 7.1E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS13215 b15737bc1a62259dc046bef6577d890e 148 Gene3D G3DSA:3.90.79.10 2 140 1.9E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS21430 ed2affadf47d099a67b84bf9a92c5180 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.9E-59 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 YPTB_RS21430 ed2affadf47d099a67b84bf9a92c5180 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 6.4E-39 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YPTB_RS21430 ed2affadf47d099a67b84bf9a92c5180 156 PANTHER PTHR33445 1 156 3.5E-48 T 22-04-2016 YPTB_RS21430 ed2affadf47d099a67b84bf9a92c5180 156 Gene3D G3DSA:1.20.5.620 62 122 2.4E-25 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain YPTB_RS21430 ed2affadf47d099a67b84bf9a92c5180 156 SUPERFAMILY SSF81573 63 121 4.58E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain YPTB_RS21430 ed2affadf47d099a67b84bf9a92c5180 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.264 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YPTB_RS02320 033e3c244ce758d4e5d82bdad2e7e941 192 PANTHER PTHR35335:SF1 1 180 2.9E-49 T 22-04-2016 YPTB_RS02320 033e3c244ce758d4e5d82bdad2e7e941 192 PANTHER PTHR35335 1 180 2.9E-49 T 22-04-2016 YPTB_RS02320 033e3c244ce758d4e5d82bdad2e7e941 192 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 1.1E-31 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 YPTB_RS00455 f38e55ee3a9879d1a320e5f8349a683e 162 PANTHER PTHR38102 1 162 3.8E-114 T 22-04-2016 YPTB_RS00455 f38e55ee3a9879d1a320e5f8349a683e 162 Pfam PF07813 LTXXQ motif family protein 45 142 8.2E-23 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 YPTB_RS00455 f38e55ee3a9879d1a320e5f8349a683e 162 PANTHER PTHR38102:SF2 1 162 3.8E-114 T 22-04-2016 YPTB_RS00455 f38e55ee3a9879d1a320e5f8349a683e 162 PIRSF PIRSF034445 1 152 4.5E-32 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 YPTB_RS09585 e3efffe19faefd96a5b2a6f59c6d63a0 808 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 200 548 7.4E-80 T 22-04-2016 IPR010090 Phage tail tape measure protein YPTB_RS09585 e3efffe19faefd96a5b2a6f59c6d63a0 808 Pfam PF10145 Phage-related minor tail protein 240 440 9.0E-49 T 22-04-2016 IPR010090 Phage tail tape measure protein YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 PANTHER PTHR30065 1 260 3.9E-182 T 22-04-2016 YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 Pfam PF01311 Bacterial export proteins, family 1 9 243 1.2E-52 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 248 3.1E-72 T 22-04-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 PANTHER PTHR30065:SF3 1 260 3.9E-182 T 22-04-2016 YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS01945 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 26 6.7E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS16580 36f064ec6082ada08017705c09492430 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 137 4.9E-36 T 22-04-2016 IPR013545 Type II secretion system protein G YPTB_RS16580 36f064ec6082ada08017705c09492430 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 8.0E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 8.0E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 SUPERFAMILY SSF54523 35 138 2.56E-36 T 22-04-2016 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 PANTHER PTHR30093 1 137 3.1E-74 T 22-04-2016 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 8.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS16580 36f064ec6082ada08017705c09492430 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 137 1.8E-60 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 PANTHER PTHR30093:SF9 1 137 3.1E-74 T 22-04-2016 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 Gene3D G3DSA:3.30.700.10 9 73 2.7E-10 T 22-04-2016 YPTB_RS16580 36f064ec6082ada08017705c09492430 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS01125 934b1f85d0e2803b69342d8c4ccfad5d 850 Pfam PF12633 Adenylate cyclase NT domain 5 200 5.1E-80 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 YPTB_RS01125 934b1f85d0e2803b69342d8c4ccfad5d 850 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YPTB_RS01125 934b1f85d0e2803b69342d8c4ccfad5d 850 PANTHER PTHR38760 2 850 0.0 T 22-04-2016 YPTB_RS01125 934b1f85d0e2803b69342d8c4ccfad5d 850 Pfam PF01295 Adenylate cyclase, class-I 228 825 2.0E-261 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YPTB_RS01125 934b1f85d0e2803b69342d8c4ccfad5d 850 PIRSF PIRSF001444 1 850 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YPTB_RS01125 934b1f85d0e2803b69342d8c4ccfad5d 850 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 PANTHER PTHR13779 10 447 2.2E-194 T 22-04-2016 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 4.0E-64 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 PANTHER PTHR13779:SF7 10 447 2.2E-194 T 22-04-2016 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.10.8.60 153 229 5.0E-6 T 22-04-2016 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.10.3710.10 348 444 1.3E-32 T 22-04-2016 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 7.0E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 SMART SM00382 49 165 4.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 SUPERFAMILY SSF48019 252 434 1.25E-70 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:3.40.50.300 10 152 8.0E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF16193 AAA C-terminal domain 188 267 2.5E-20 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.20.272.10 249 347 2.6E-42 T 22-04-2016 YPTB_RS07750 7a2f7ec7f24af39822dcce1724c4f9f4 447 SUPERFAMILY SSF52540 6 236 5.36E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15640 5c419e7d4e08e8222bd29d77452500e6 151 PANTHER PTHR35867 2 151 3.4E-44 T 22-04-2016 YPTB_RS15640 5c419e7d4e08e8222bd29d77452500e6 151 PANTHER PTHR35867:SF1 2 151 3.4E-44 T 22-04-2016 YPTB_RS15640 5c419e7d4e08e8222bd29d77452500e6 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 140 3.5E-35 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC YPTB_RS15640 5c419e7d4e08e8222bd29d77452500e6 151 PIRSF PIRSF004923 1 150 7.2E-38 T 22-04-2016 IPR026268 Protein RseC YPTB_RS12080 469b51300255f8ce95046e9ef0eb0762 846 Pfam PF10139 Putative bacterial virulence factor 485 838 5.1E-68 T 22-04-2016 IPR017030 Virulence effector, SrfC YPTB_RS12080 469b51300255f8ce95046e9ef0eb0762 846 Pfam PF10139 Putative bacterial virulence factor 28 471 4.0E-135 T 22-04-2016 IPR017030 Virulence effector, SrfC YPTB_RS05070 a497bd137dc88c9d3c78850d03b86f54 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.975 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YPTB_RS05070 a497bd137dc88c9d3c78850d03b86f54 303 PANTHER PTHR38103 3 303 2.5E-165 T 22-04-2016 YPTB_RS05070 a497bd137dc88c9d3c78850d03b86f54 303 PANTHER PTHR38103:SF1 3 303 2.5E-165 T 22-04-2016 YPTB_RS05070 a497bd137dc88c9d3c78850d03b86f54 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 3.3E-130 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YPTB_RS17425 d3e977a6caa7ab8966dde28b0aef9f7e 197 PANTHER PTHR11067:SF9 1 197 1.9E-90 T 22-04-2016 YPTB_RS17425 d3e977a6caa7ab8966dde28b0aef9f7e 197 PANTHER PTHR11067 1 197 1.9E-90 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPTB_RS17425 d3e977a6caa7ab8966dde28b0aef9f7e 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.0E-67 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPTB_RS17425 d3e977a6caa7ab8966dde28b0aef9f7e 197 Pfam PF01725 Ham1 family 4 191 2.2E-56 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPTB_RS17425 d3e977a6caa7ab8966dde28b0aef9f7e 197 Gene3D G3DSA:3.90.950.10 1 196 8.4E-84 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS17425 d3e977a6caa7ab8966dde28b0aef9f7e 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.603 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPTB_RS17425 d3e977a6caa7ab8966dde28b0aef9f7e 197 SUPERFAMILY SSF52972 1 195 4.97E-75 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS19355 03269eafc2339e91968f46330ef09503 454 Pfam PF07690 Major Facilitator Superfamily 31 397 4.4E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS19355 03269eafc2339e91968f46330ef09503 454 Gene3D G3DSA:1.20.1250.20 23 236 8.8E-22 T 22-04-2016 YPTB_RS19355 03269eafc2339e91968f46330ef09503 454 Gene3D G3DSA:1.20.1250.20 258 445 6.9E-9 T 22-04-2016 YPTB_RS19355 03269eafc2339e91968f46330ef09503 454 SUPERFAMILY SSF103473 23 435 5.1E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS19355 03269eafc2339e91968f46330ef09503 454 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPTB_RS19355 03269eafc2339e91968f46330ef09503 454 PANTHER PTHR23508 9 452 1.9E-173 T 22-04-2016 YPTB_RS19355 03269eafc2339e91968f46330ef09503 454 PANTHER PTHR23508:SF17 9 452 1.9E-173 T 22-04-2016 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.853 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 Gene3D G3DSA:3.60.150.10 10 352 1.4E-160 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 PANTHER PTHR21085 2 352 6.0E-225 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.7E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 SUPERFAMILY SSF103263 4 351 4.19E-149 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 Pfam PF01264 Chorismate synthase 10 345 2.2E-143 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 PIRSF PIRSF001456 3 358 2.3E-142 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS14270 f7b73d27aea32c059ba05a697fa0e8fa 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPTB_RS11215 9e524d1239f0091d079daf27207fdd0f 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 6.6E-94 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPTB_RS11215 9e524d1239f0091d079daf27207fdd0f 320 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 3.4E-133 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 YPTB_RS11215 9e524d1239f0091d079daf27207fdd0f 320 PANTHER PTHR30606:SF4 10 320 1.6E-212 T 22-04-2016 YPTB_RS11215 9e524d1239f0091d079daf27207fdd0f 320 PANTHER PTHR30606 10 320 1.6E-212 T 22-04-2016 YPTB_RS11215 9e524d1239f0091d079daf27207fdd0f 320 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.918 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 YPTB_RS11215 9e524d1239f0091d079daf27207fdd0f 320 PIRSF PIRSF026649 11 315 2.6E-92 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 PANTHER PTHR30160 1 323 1.4E-105 T 22-04-2016 YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 317 7.0E-115 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 PANTHER PTHR30160:SF13 1 323 1.4E-105 T 22-04-2016 YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 320 3.8E-106 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 321 40.666 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 SUPERFAMILY SSF52540 46 177 3.04E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 Gene3D G3DSA:3.40.50.300 45 108 1.6E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07840 f985fc74f2c0c6cea852a04715774e7e 328 Gene3D G3DSA:3.40.50.300 155 167 1.6E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 Gene3D G3DSA:4.10.520.10 1 90 1.9E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 PANTHER PTHR33175:SF4 1 90 2.6E-60 T 22-04-2016 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 PANTHER PTHR33175 1 90 2.6E-60 T 22-04-2016 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 SMART SM00411 1 90 6.3E-44 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPTB_RS01760 be09dc7492f443309dfbef4f621ad7b5 91 SUPERFAMILY SSF47729 1 90 1.15E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 SUPERFAMILY SSF48019 213 334 2.04E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 205 7.0E-63 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 PANTHER PTHR11669:SF8 12 330 1.3E-179 T 22-04-2016 YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 PANTHER PTHR11669 12 330 1.3E-179 T 22-04-2016 YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 SUPERFAMILY SSF52540 1 211 7.18E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 Gene3D G3DSA:3.40.50.300 4 164 8.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 Pfam PF13177 DNA polymerase III, delta subunit 9 161 7.8E-41 T 22-04-2016 YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 212 327 7.3E-42 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS13400 75ecbe437b9a07c18d3d4a739326b1da 340 Gene3D G3DSA:1.20.272.10 213 333 3.9E-44 T 22-04-2016 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 SUPERFAMILY SSF69304 155 428 9.15E-58 T 22-04-2016 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Gene3D G3DSA:2.130.10.10 153 428 1.1E-76 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 2.9E-160 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Gene3D G3DSA:3.40.50.10070 22 152 7.9E-53 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.9E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 377 398 0.017 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 1.9E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 282 315 9.1E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731:SF123 160 428 1.6E-137 T 22-04-2016 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731:SF123 1 121 1.6E-137 T 22-04-2016 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF04052 TolB amino-terminal domain 23 122 1.4E-32 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 SUPERFAMILY SSF52964 28 161 1.12E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731 160 428 1.6E-137 T 22-04-2016 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731 1 121 1.6E-137 T 22-04-2016 YPTB_RS06400 2255c01ecde5a06234959dd5985acf4f 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.571 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 YPTB_RS16275 b989c9d2c8daa1939c9314eed8647913 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.7E-57 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YPTB_RS16275 b989c9d2c8daa1939c9314eed8647913 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.444 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YPTB_RS16275 b989c9d2c8daa1939c9314eed8647913 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-67 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 PANTHER PTHR24220:SF151 5 319 2.8E-161 T 22-04-2016 YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 Gene3D G3DSA:2.40.50.140 293 352 3.3E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 SMART SM00382 29 217 8.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 SUPERFAMILY SSF52540 5 248 6.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 Pfam PF08402 TOBE domain 289 360 3.0E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 Pfam PF00005 ABC transporter 20 162 4.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 Gene3D G3DSA:2.40.50.100 245 292 4.5E-19 T 22-04-2016 YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 Gene3D G3DSA:2.40.50.100 354 369 4.5E-19 T 22-04-2016 YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 Gene3D G3DSA:3.40.50.300 6 239 4.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 SUPERFAMILY SSF50331 242 368 4.86E-26 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS18645 8006388792644373b4dcc83ae6cefade 371 PANTHER PTHR24220 5 319 2.8E-161 T 22-04-2016 YPTB_RS20690 d188d0ac0f26939ca813184067bdfdba 737 Pfam PF05170 AsmA family 1 630 1.4E-118 T 22-04-2016 IPR007844 AsmA YPTB_RS20690 d188d0ac0f26939ca813184067bdfdba 737 PANTHER PTHR30441 112 735 7.1E-171 T 22-04-2016 YPTB_RS20690 d188d0ac0f26939ca813184067bdfdba 737 PANTHER PTHR30441 6 90 7.1E-171 T 22-04-2016 YPTB_RS20690 d188d0ac0f26939ca813184067bdfdba 737 PANTHER PTHR30441:SF2 112 735 7.1E-171 T 22-04-2016 YPTB_RS20690 d188d0ac0f26939ca813184067bdfdba 737 PANTHER PTHR30441:SF2 6 90 7.1E-171 T 22-04-2016 YPTB_RS05010 87764000f0484f305f802da25e3cbb9c 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 7.2E-225 T 22-04-2016 IPR010520 UPF0255 family YPTB_RS05010 87764000f0484f305f802da25e3cbb9c 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 66.431 T 22-04-2016 IPR010520 UPF0255 family YPTB_RS05010 87764000f0484f305f802da25e3cbb9c 415 PANTHER PTHR11614:SF87 117 302 1.0E-48 T 22-04-2016 YPTB_RS05010 87764000f0484f305f802da25e3cbb9c 415 PANTHER PTHR11614 117 302 1.0E-48 T 22-04-2016 YPTB_RS05010 87764000f0484f305f802da25e3cbb9c 415 SUPERFAMILY SSF53474 46 412 3.24E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS05010 87764000f0484f305f802da25e3cbb9c 415 Gene3D G3DSA:3.40.50.1820 347 411 1.7E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS05010 87764000f0484f305f802da25e3cbb9c 415 Gene3D G3DSA:3.40.50.1820 156 302 1.7E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS19185 f374b66684a69a6305aab915e7e7271c 651 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 651 55.618 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YPTB_RS19185 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509 303 636 0.0 T 22-04-2016 YPTB_RS19185 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509 1 253 0.0 T 22-04-2016 YPTB_RS19185 f374b66684a69a6305aab915e7e7271c 651 Pfam PF04632 Fusaric acid resistance protein family 8 649 5.9E-171 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 YPTB_RS19185 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509:SF10 303 636 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YPTB_RS19185 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509:SF10 1 253 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 PANTHER PTHR11956 1 576 5.5E-272 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.5E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 Pfam PF00750 tRNA synthetases class I (R) 102 446 2.5E-166 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 8.8E-204 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 SMART SM01016 5 87 8.0E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 PANTHER PTHR11956:SF1 1 576 5.5E-272 T 22-04-2016 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 Gene3D G3DSA:1.10.730.10 454 576 1.4E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 SUPERFAMILY SSF55190 2 96 7.98E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 SUPERFAMILY SSF47323 454 576 1.57E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 Pfam PF05746 DALR anticodon binding domain 460 576 4.2E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.595 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 SMART SM00836 460 576 1.7E-37 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 Gene3D G3DSA:3.40.50.620 110 451 9.0E-115 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 SUPERFAMILY SSF52374 109 454 1.48E-94 T 22-04-2016 YPTB_RS11130 d89ee8ba272fccf43321d20a089b7f6f 576 Gene3D G3DSA:3.30.1360.70 2 104 2.4E-33 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPTB_RS20710 1c44f2f1110680de2520978ea46b8363 499 SUPERFAMILY SSF63411 342 458 8.56E-7 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPTB_RS20710 1c44f2f1110680de2520978ea46b8363 499 PANTHER PTHR11851 1 486 6.5E-90 T 22-04-2016 YPTB_RS20710 1c44f2f1110680de2520978ea46b8363 499 Pfam PF00675 Insulinase (Peptidase family M16) 51 173 5.6E-11 T 22-04-2016 IPR011765 Peptidase M16, N-terminal YPTB_RS20710 1c44f2f1110680de2520978ea46b8363 499 PANTHER PTHR11851:SF136 1 486 6.5E-90 T 22-04-2016 YPTB_RS20710 1c44f2f1110680de2520978ea46b8363 499 Pfam PF05193 Peptidase M16 inactive domain 201 378 6.9E-17 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YPTB_RS20710 1c44f2f1110680de2520978ea46b8363 499 Gene3D G3DSA:3.30.830.10 34 247 2.6E-24 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPTB_RS20710 1c44f2f1110680de2520978ea46b8363 499 SUPERFAMILY SSF63411 29 240 2.62E-27 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPTB_RS01730 d0d3f38ce7231dcf102417a582289634 169 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 149 6.2E-57 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YPTB_RS01730 d0d3f38ce7231dcf102417a582289634 169 PIRSF PIRSF016548 1 161 1.0E-52 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YPTB_RS01730 d0d3f38ce7231dcf102417a582289634 169 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 40.696 T 22-04-2016 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 Gene3D G3DSA:3.40.190.10 111 188 1.4E-10 T 22-04-2016 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 SUPERFAMILY SSF46785 6 84 1.68E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 Gene3D G3DSA:3.40.190.10 189 243 3.9E-6 T 22-04-2016 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 PANTHER PTHR30126:SF29 2 286 1.1E-126 T 22-04-2016 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 SUPERFAMILY SSF53850 95 288 6.88E-28 T 22-04-2016 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 Pfam PF03466 LysR substrate binding domain 91 286 1.8E-26 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 Gene3D G3DSA:1.10.10.10 4 81 6.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 PANTHER PTHR30126 2 286 1.1E-126 T 22-04-2016 YPTB_RS14630 350923cacb94c2bf04148533c074d060 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS09055 c04aecd7c3b44cee5431b40451fcaf2c 268 PANTHER PTHR30502:SF0 6 265 8.7E-106 T 22-04-2016 YPTB_RS09055 c04aecd7c3b44cee5431b40451fcaf2c 268 PANTHER PTHR30502 6 265 8.7E-106 T 22-04-2016 YPTB_RS09055 c04aecd7c3b44cee5431b40451fcaf2c 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 8.7E-61 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YPTB_RS09055 c04aecd7c3b44cee5431b40451fcaf2c 268 SUPERFAMILY SSF51621 2 253 2.72E-82 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS09055 c04aecd7c3b44cee5431b40451fcaf2c 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 253 6.5E-137 T 22-04-2016 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 YPTB_RS09055 c04aecd7c3b44cee5431b40451fcaf2c 268 Gene3D G3DSA:3.20.20.60 4 252 2.9E-80 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 Gene3D G3DSA:2.40.170.20 147 677 1.5E-142 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 SUPERFAMILY SSF56935 22 677 2.88E-125 T 22-04-2016 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 Pfam PF00593 TonB dependent receptor 439 672 1.9E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 Gene3D G3DSA:2.170.130.10 14 139 7.3E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 36 677 1.6E-106 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 PANTHER PTHR32552 7 677 0.0 T 22-04-2016 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 PANTHER PTHR32552:SF6 7 677 0.0 T 22-04-2016 YPTB_RS17480 664c0a925e2959368866bd293468c603 677 Pfam PF07715 TonB-dependent Receptor Plug Domain 35 131 7.7E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 Gene3D G3DSA:3.40.350.10 2 178 3.7E-53 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 Gene3D G3DSA:3.90.230.10 179 433 2.7E-86 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 2.8E-35 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 PANTHER PTHR10804:SF17 1 434 8.2E-167 T 22-04-2016 YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 PANTHER PTHR10804 1 434 8.2E-167 T 22-04-2016 YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 SUPERFAMILY SSF55920 175 433 1.03E-85 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 SMART SM01011 1 136 1.2E-56 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 SUPERFAMILY SSF53092 1 174 2.56E-52 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 1.6E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 1.6E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 Pfam PF00557 Metallopeptidase family M24 182 412 3.8E-64 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS17255 4d1e08f7fe9680566748d24259b5b356 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SMART SM00382 44 232 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SMART SM00382 293 488 5.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Pfam PF00005 ABC transporter 286 439 5.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Pfam PF00005 ABC transporter 35 184 2.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Gene3D G3DSA:3.40.50.300 17 236 8.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Gene3D G3DSA:3.40.50.300 285 503 9.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 PANTHER PTHR24220:SF516 21 393 1.0E-238 T 22-04-2016 YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SUPERFAMILY SSF52540 283 497 5.62E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SUPERFAMILY SSF52540 18 240 1.63E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11875 bf2e4acfd5b7621c48d58bc6f297f4ac 523 PANTHER PTHR24220 21 393 1.0E-238 T 22-04-2016 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 PANTHER PTHR10515 2 440 3.8E-226 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 53.747 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 3.7E-50 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 PANTHER PTHR10515:SF0 2 440 3.8E-226 T 22-04-2016 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 423 1.8E-25 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 SUPERFAMILY SSF47648 3 70 2.35E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.0E-19 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 Gene3D G3DSA:3.40.1030.10 75 335 2.7E-109 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 SUPERFAMILY SSF54680 337 439 5.89E-34 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 PIRSF PIRSF000478 1 439 1.2E-152 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 SUPERFAMILY SSF52418 75 334 4.32E-87 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 6.3E-166 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 Gene3D G3DSA:1.20.970.10 2 68 1.1E-29 T 22-04-2016 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 Gene3D G3DSA:3.90.1170.30 337 433 1.4E-37 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 SMART SM00941 350 424 4.3E-34 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YPTB_RS03295 cec115648c698b33e05ce7ad3a092e7e 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 4.6E-229 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 YPTB_RS06620 60a99b777376da0483268e83ceb12218 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 6.0E-62 T 22-04-2016 YPTB_RS06620 60a99b777376da0483268e83ceb12218 236 PANTHER PTHR23291 2 236 6.1E-103 T 22-04-2016 IPR006214 Bax inhibitor 1-related YPTB_RS06620 60a99b777376da0483268e83ceb12218 236 PANTHER PTHR23291:SF42 2 236 6.1E-103 T 22-04-2016 YPTB_RS15910 12214bc713bc4000b4800f377de806c5 231 Pfam PF05194 UreE urease accessory protein, C-terminal domain 85 220 3.0E-6 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 YPTB_RS15910 12214bc713bc4000b4800f377de806c5 231 SUPERFAMILY SSF69287 3 79 5.49E-18 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YPTB_RS15910 12214bc713bc4000b4800f377de806c5 231 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 159 14.838 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 YPTB_RS15910 12214bc713bc4000b4800f377de806c5 231 Gene3D G3DSA:2.60.260.20 3 79 1.6E-24 T 22-04-2016 YPTB_RS15910 12214bc713bc4000b4800f377de806c5 231 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 73 7.4E-17 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YPTB_RS15910 12214bc713bc4000b4800f377de806c5 231 SMART SM00988 11 75 3.1E-16 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YPTB_RS17420 50f776440ef7d13c6d422092d0abb9c9 96 PANTHER PTHR13420 10 96 5.2E-30 T 22-04-2016 YPTB_RS17420 50f776440ef7d13c6d422092d0abb9c9 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 91 2.3E-30 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 YPTB_RS17420 50f776440ef7d13c6d422092d0abb9c9 96 Gene3D G3DSA:3.30.1200.10 5 90 1.7E-30 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPTB_RS17420 50f776440ef7d13c6d422092d0abb9c9 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 6.6E-26 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPTB_RS17420 50f776440ef7d13c6d422092d0abb9c9 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 20.522 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPTB_RS17420 50f776440ef7d13c6d422092d0abb9c9 96 SMART SM01152 7 83 8.3E-39 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPTB_RS17420 50f776440ef7d13c6d422092d0abb9c9 96 SUPERFAMILY SSF69786 4 95 1.83E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 PANTHER PTHR11699 1 493 0.0 T 22-04-2016 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 Gene3D G3DSA:3.40.309.10 267 460 2.6E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 PANTHER PTHR11699:SF188 1 493 0.0 T 22-04-2016 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 SUPERFAMILY SSF53720 3 493 6.54E-144 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 Pfam PF00171 Aldehyde dehydrogenase family 27 487 8.4E-136 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 Gene3D G3DSA:3.40.605.10 3 266 1.9E-86 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS05905 a9ece919dec9b846e50bbfdd2d07af83 508 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 16 491 3.0E-201 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 YPTB_RS17360 6b0ee1f37217aaedf18f6a7e612ac122 235 PANTHER PTHR33607 1 232 1.3E-72 T 22-04-2016 YPTB_RS17360 6b0ee1f37217aaedf18f6a7e612ac122 235 SUPERFAMILY SSF54060 25 230 1.29E-86 T 22-04-2016 YPTB_RS17360 6b0ee1f37217aaedf18f6a7e612ac122 235 Pfam PF04231 Endonuclease I 44 229 1.9E-42 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 YPTB_RS02030 77a9afe418efb35ceecb3687b44115ef 162 Gene3D G3DSA:1.10.10.10 12 81 9.9E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS02030 77a9afe418efb35ceecb3687b44115ef 162 PIRSF PIRSF030837 1 161 2.1E-87 T 22-04-2016 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPTB_RS02030 77a9afe418efb35ceecb3687b44115ef 162 SUPERFAMILY SSF46785 9 86 3.97E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14490 881c6e9620625deac532dce11eb20352 397 PANTHER PTHR37951 315 394 1.1E-240 T 22-04-2016 YPTB_RS14490 881c6e9620625deac532dce11eb20352 397 PANTHER PTHR37951 275 294 1.1E-240 T 22-04-2016 YPTB_RS14490 881c6e9620625deac532dce11eb20352 397 PANTHER PTHR37951 3 253 1.1E-240 T 22-04-2016 YPTB_RS14490 881c6e9620625deac532dce11eb20352 397 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 140 2.6E-29 T 22-04-2016 IPR010657 ImpA, N-terminal YPTB_RS14490 881c6e9620625deac532dce11eb20352 397 PANTHER PTHR37951:SF2 315 394 1.1E-240 T 22-04-2016 YPTB_RS14490 881c6e9620625deac532dce11eb20352 397 PANTHER PTHR37951:SF2 275 294 1.1E-240 T 22-04-2016 YPTB_RS14490 881c6e9620625deac532dce11eb20352 397 PANTHER PTHR37951:SF2 3 253 1.1E-240 T 22-04-2016 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 1.2E-181 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 420 51.997 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 Gene3D G3DSA:3.50.50.60 121 122 5.2E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 Gene3D G3DSA:3.50.50.60 254 419 5.2E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 Gene3D G3DSA:3.50.50.60 1 62 5.2E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 PIRSF PIRSF000141 1 423 1.2E-175 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 SUPERFAMILY SSF51905 254 418 6.49E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 SUPERFAMILY SSF51905 1 35 6.49E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 SUPERFAMILY SSF51905 133 200 6.49E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01260 dd23b973d29c2190a553851af42603ca 424 Pfam PF00890 FAD binding domain 4 404 2.1E-62 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB_RS19450 06542f0163894594a6f1f73d60ebb825 329 Gene3D G3DSA:3.40.50.2300 150 282 2.0E-25 T 22-04-2016 YPTB_RS19450 06542f0163894594a6f1f73d60ebb825 329 Gene3D G3DSA:3.40.50.2300 30 149 1.2E-30 T 22-04-2016 YPTB_RS19450 06542f0163894594a6f1f73d60ebb825 329 SUPERFAMILY SSF53822 28 327 4.53E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS19450 06542f0163894594a6f1f73d60ebb825 329 PANTHER PTHR32196:SF36 1 297 4.3E-191 T 22-04-2016 YPTB_RS19450 06542f0163894594a6f1f73d60ebb825 329 Pfam PF13407 Periplasmic binding protein domain 32 289 1.1E-53 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS19450 06542f0163894594a6f1f73d60ebb825 329 PANTHER PTHR32196 1 297 4.3E-191 T 22-04-2016 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 PANTHER PTHR30126 1 293 3.3E-191 T 22-04-2016 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-38 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 PANTHER PTHR30126:SF14 1 293 3.3E-191 T 22-04-2016 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:3.40.190.10 90 175 1.2E-15 T 22-04-2016 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 SUPERFAMILY SSF53850 89 293 7.72E-33 T 22-04-2016 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 SUPERFAMILY SSF46785 1 111 8.92E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:3.40.190.10 176 252 3.5E-12 T 22-04-2016 YPTB_RS00880 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:1.10.10.10 1 84 2.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 5.3E-159 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Gene3D G3DSA:3.30.230.20 3 125 8.4E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.6E-108 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 PANTHER PTHR33694 1 306 4.6E-148 T 22-04-2016 YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 SUPERFAMILY SSF54211 3 124 1.06E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Gene3D G3DSA:3.30.1700.10 129 283 9.5E-63 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 49.084 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 PANTHER PTHR33694:SF1 1 306 4.6E-148 T 22-04-2016 YPTB_RS03885 03c3fa9d1b52ad5ba66ba21ea20291d6 306 SUPERFAMILY SSF54211 134 278 1.44E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS07815 254e9bb73396fc3b5b6be9bcd83b8173 230 Pfam PF02224 Cytidylate kinase 8 221 3.0E-81 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YPTB_RS07815 254e9bb73396fc3b5b6be9bcd83b8173 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.924 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YPTB_RS07815 254e9bb73396fc3b5b6be9bcd83b8173 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.0E-92 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YPTB_RS07815 254e9bb73396fc3b5b6be9bcd83b8173 230 PANTHER PTHR21299 6 230 3.5E-86 T 22-04-2016 YPTB_RS07815 254e9bb73396fc3b5b6be9bcd83b8173 230 SUPERFAMILY SSF52540 6 224 3.05E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07815 254e9bb73396fc3b5b6be9bcd83b8173 230 Gene3D G3DSA:3.40.50.300 6 221 2.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 Pfam PF00929 Exonuclease 31 205 3.6E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 SUPERFAMILY SSF53098 20 218 1.11E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 TIGRFAM TIGR01298 RNaseT: ribonuclease T 21 219 1.7E-105 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 PANTHER PTHR30231 18 224 1.1E-120 T 22-04-2016 YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 SMART SM00479 29 214 8.1E-41 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 Hamap MF_00157 Ribonuclease T [rnt]. 1 226 118.177 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 Gene3D G3DSA:3.30.420.10 21 220 3.8E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS12505 86cba64d9819e19b7ed866e857b1ae79 226 PANTHER PTHR30231:SF2 18 224 1.1E-120 T 22-04-2016 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 PANTHER PTHR21091 12 233 3.5E-93 T 22-04-2016 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 SUPERFAMILY SSF53790 13 232 3.79E-83 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 PIRSF PIRSF005917 2 288 6.3E-107 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 5.4E-26 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.28 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.1E-110 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 PANTHER PTHR21091:SF18 12 233 3.5E-93 T 22-04-2016 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 Gene3D G3DSA:3.40.1010.10 13 121 1.2E-17 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YPTB_RS18905 911bebb9c04da28bcb1be81005777f26 299 Gene3D G3DSA:3.30.950.10 122 235 1.4E-41 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YPTB_RS17125 98c613a6a0987b1b5b43b9610c3116a0 573 SUPERFAMILY SSF69255 256 348 4.18E-14 T 22-04-2016 YPTB_RS17125 98c613a6a0987b1b5b43b9610c3116a0 573 SUPERFAMILY SSF69349 339 520 1.41E-23 T 22-04-2016 YPTB_RS17125 98c613a6a0987b1b5b43b9610c3116a0 573 Gene3D G3DSA:2.40.50.230 261 347 3.5E-10 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 SUPERFAMILY SSF53850 3 277 6.73E-62 T 22-04-2016 YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 PANTHER PTHR30085:SF2 11 303 7.2E-136 T 22-04-2016 YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 130 236 2.9E-31 T 22-04-2016 YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 SMART SM00062 44 276 6.0E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 237 279 1.4E-28 T 22-04-2016 YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 41 129 1.4E-28 T 22-04-2016 YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 PANTHER PTHR30085 11 303 7.2E-136 T 22-04-2016 YPTB_RS06100 a23d13698fb21c51a28fe0db7ba3f12d 305 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 274 2.7E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 PANTHER PTHR11985 5 500 8.4E-200 T 22-04-2016 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 SUPERFAMILY SSF54373 226 319 2.16E-7 T 22-04-2016 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 Gene3D G3DSA:3.50.50.60 2 270 3.7E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 492 8.0E-12 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 Pfam PF01266 FAD dependent oxidoreductase 5 323 2.1E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 SUPERFAMILY SSF51905 312 374 3.89E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS20455 960103021f3f63751eaf5e640cafa08b 504 SUPERFAMILY SSF51905 1 260 3.89E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS15605 46a9d15d0d92d1a35a0372daef929979 243 SUPERFAMILY SSF63892 4 242 1.96E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPTB_RS15605 46a9d15d0d92d1a35a0372daef929979 243 PANTHER PTHR30456 2 243 1.9E-149 T 22-04-2016 YPTB_RS15605 46a9d15d0d92d1a35a0372daef929979 243 PANTHER PTHR30456:SF0 2 243 1.9E-149 T 22-04-2016 YPTB_RS15605 46a9d15d0d92d1a35a0372daef929979 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.123 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPTB_RS15605 46a9d15d0d92d1a35a0372daef929979 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 1.7E-104 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPTB_RS15605 46a9d15d0d92d1a35a0372daef929979 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.6E-102 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPTB_RS15605 46a9d15d0d92d1a35a0372daef929979 243 Gene3D G3DSA:3.20.20.70 4 242 3.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS05990 3f100158d7e838615e194740672b2537 159 SUPERFAMILY SSF50249 2 62 1.05E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS05990 3f100158d7e838615e194740672b2537 159 Gene3D G3DSA:2.40.50.140 1 66 8.4E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS05990 3f100158d7e838615e194740672b2537 159 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 6.4E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS14570 26a42f96a1eaadd14f522695fbe2130e 258 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 251 2.3E-27 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 YPTB_RS14570 26a42f96a1eaadd14f522695fbe2130e 258 PANTHER PTHR38095 1 258 2.8E-38 T 22-04-2016 YPTB_RS14570 26a42f96a1eaadd14f522695fbe2130e 258 PANTHER PTHR38095:SF2 1 258 2.8E-38 T 22-04-2016 YPTB_RS01765 a7b5fb58541b856da49c10a7494549cf 217 Pfam PF07356 Protein of unknown function (DUF1481) 28 213 4.0E-76 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 YPTB_RS01765 a7b5fb58541b856da49c10a7494549cf 217 PIRSF PIRSF006993 1 217 9.3E-111 T 22-04-2016 IPR016500 Uncharacterised conserved protein UCP006993 YPTB_RS21090 0a26af72d6d03f006ae30861e162b92f 154 SUPERFAMILY SSF49764 30 134 7.32E-20 T 22-04-2016 IPR008978 HSP20-like chaperone YPTB_RS21090 0a26af72d6d03f006ae30861e162b92f 154 PANTHER PTHR11527:SF127 1 142 6.4E-81 T 22-04-2016 YPTB_RS21090 0a26af72d6d03f006ae30861e162b92f 154 PANTHER PTHR11527 1 142 6.4E-81 T 22-04-2016 IPR031107 Small heat shock protein HSP20 YPTB_RS21090 0a26af72d6d03f006ae30861e162b92f 154 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 147 49.04 T 22-04-2016 IPR022848 Small heat shock protein IbpB YPTB_RS21090 0a26af72d6d03f006ae30861e162b92f 154 Gene3D G3DSA:2.60.40.790 22 134 1.7E-15 T 22-04-2016 IPR008978 HSP20-like chaperone YPTB_RS21090 0a26af72d6d03f006ae30861e162b92f 154 Pfam PF00011 Hsp20/alpha crystallin family 39 134 1.1E-16 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain YPTB_RS20100 3c16fe8083073a2aa8ed86d6938cf170 182 PANTHER PTHR10204 5 182 9.7E-88 T 22-04-2016 YPTB_RS20100 3c16fe8083073a2aa8ed86d6938cf170 182 Gene3D G3DSA:3.40.50.360 6 176 1.3E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS20100 3c16fe8083073a2aa8ed86d6938cf170 182 SUPERFAMILY SSF52218 5 176 3.96E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS20100 3c16fe8083073a2aa8ed86d6938cf170 182 PANTHER PTHR10204:SF42 5 182 9.7E-88 T 22-04-2016 YPTB_RS20100 3c16fe8083073a2aa8ed86d6938cf170 182 Pfam PF02525 Flavodoxin-like fold 6 173 4.3E-40 T 22-04-2016 IPR003680 Flavodoxin-like fold YPTB_RS20100 3c16fe8083073a2aa8ed86d6938cf170 182 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 49.544 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YPTB_RS01460 9f81ba0c7cf433741ac8e4622589ede2 290 Gene3D G3DSA:3.40.50.1820 45 278 1.3E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS01460 9f81ba0c7cf433741ac8e4622589ede2 290 SUPERFAMILY SSF53474 45 278 5.12E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS01460 9f81ba0c7cf433741ac8e4622589ede2 290 Pfam PF01738 Dienelactone hydrolase family 55 278 7.4E-75 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 YPTB_RS01460 9f81ba0c7cf433741ac8e4622589ede2 290 PANTHER PTHR17630 38 278 2.3E-128 T 22-04-2016 YPTB_RS01460 9f81ba0c7cf433741ac8e4622589ede2 290 PANTHER PTHR17630:SF42 38 278 2.3E-128 T 22-04-2016 YPTB_RS13805 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 PANTHER PTHR22911:SF37 8 294 2.4E-119 T 22-04-2016 YPTB_RS13805 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 PANTHER PTHR22911 8 294 2.4E-119 T 22-04-2016 YPTB_RS13805 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 Pfam PF00892 EamA-like transporter family 150 279 1.1E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS13805 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 SUPERFAMILY SSF103481 187 281 9.02E-7 T 22-04-2016 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 Gene3D G3DSA:2.160.10.10 138 309 2.2E-41 T 22-04-2016 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 Gene3D G3DSA:2.160.10.10 100 137 1.5E-11 T 22-04-2016 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.5E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 3.7E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 6.6E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 PANTHER PTHR22572 61 295 5.9E-67 T 22-04-2016 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.5E-124 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.424 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 SUPERFAMILY SSF51161 33 316 1.18E-86 T 22-04-2016 IPR011004 Trimeric LpxA-like YPTB_RS16205 b4103add422614b2f10e7040b97955e8 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 2.0E-23 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 YPTB_RS08955 1d5021f260a783fd26ca8ae6972b72e1 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 3.8E-29 T 22-04-2016 IPR019672 Protein of unknown function DUF2627 YPTB_RS18390 c4e505da6ab02c448d744fe5eb04929d 386 PANTHER PTHR30094:SF0 6 385 2.4E-171 T 22-04-2016 YPTB_RS18390 c4e505da6ab02c448d744fe5eb04929d 386 PANTHER PTHR30094 6 385 2.4E-171 T 22-04-2016 YPTB_RS18390 c4e505da6ab02c448d744fe5eb04929d 386 SUPERFAMILY SSF52440 174 279 1.06E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPTB_RS18390 c4e505da6ab02c448d744fe5eb04929d 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 7.3E-164 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPTB_RS18390 c4e505da6ab02c448d744fe5eb04929d 386 SUPERFAMILY SSF56059 1 168 6.99E-93 T 22-04-2016 YPTB_RS18390 c4e505da6ab02c448d744fe5eb04929d 386 SUPERFAMILY SSF56059 266 383 6.99E-93 T 22-04-2016 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 PANTHER PTHR10381:SF22 2 206 8.6E-142 T 22-04-2016 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 PANTHER PTHR10381 2 206 8.6E-142 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 SUPERFAMILY SSF52096 23 206 8.08E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 43.839 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 Gene3D G3DSA:3.90.226.10 16 205 3.0E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.5E-108 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPTB_RS05315 362ac2313fc273dfaa85f46876b919bc 207 Pfam PF00574 Clp protease 25 205 2.5E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PANTHER PTHR30046 3 329 2.0E-228 T 22-04-2016 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PANTHER PTHR30046 358 570 2.0E-228 T 22-04-2016 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PRINTS PR01009 Flagellar M-ring protein signature 199 217 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PRINTS PR01009 Flagellar M-ring protein signature 156 170 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PRINTS PR01009 Flagellar M-ring protein signature 268 286 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PRINTS PR01009 Flagellar M-ring protein signature 124 142 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PRINTS PR01009 Flagellar M-ring protein signature 375 399 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 Pfam PF08345 Flagellar M-ring protein C-terminal 255 447 2.1E-49 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PIRSF PIRSF004862 8 570 1.1E-162 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PANTHER PTHR30046:SF0 3 329 2.0E-228 T 22-04-2016 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 PANTHER PTHR30046:SF0 358 570 2.0E-228 T 22-04-2016 YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 9.3E-74 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YPTB_RS09365 ba5d1327af3b4846b01ecfb9e1502699 570 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 18 569 1.7E-171 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 PIRSF PIRSF000774 1 477 5.7E-147 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 5.3E-60 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 392 403 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 450 468 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 376 388 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 186 203 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 2.7E-156 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 PANTHER PTHR32248:SF4 1 477 1.3E-190 T 22-04-2016 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 3.3E-69 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 PANTHER PTHR32248 1 477 1.3E-190 T 22-04-2016 YPTB_RS19085 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 2.5E-15 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPTB_RS11730 907966836e7afc654960492c9311b78c 103 Pfam PF06305 Protein of unknown function (DUF1049) 23 86 3.4E-19 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 YPTB_RS11730 907966836e7afc654960492c9311b78c 103 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 21.939 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 YPTB_RS18215 6d49d0b2b4735f5eca936eefee47600e 140 PANTHER PTHR36506:SF1 3 138 4.5E-51 T 22-04-2016 YPTB_RS18215 6d49d0b2b4735f5eca936eefee47600e 140 PANTHER PTHR36506 3 138 4.5E-51 T 22-04-2016 YPTB_RS18215 6d49d0b2b4735f5eca936eefee47600e 140 Pfam PF01478 Type IV leader peptidase family 12 108 1.6E-11 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.6E-247 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF01434 Peptidase family M41 382 591 1.1E-81 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:1.10.8.60 332 406 1.7E-28 T 22-04-2016 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 SUPERFAMILY SSF140990 402 601 3.14E-72 T 22-04-2016 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:3.40.50.300 144 331 1.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.379 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 SUPERFAMILY SSF52540 142 391 6.57E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF06480 FtsH Extracellular 5 93 9.5E-15 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 SMART SM00382 184 323 1.9E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 YPTB_RS02710 07a0e97eeca823af35261a5bd613dc03 644 PANTHER PTHR23076 1 600 0.0 T 22-04-2016 YPTB_RS07970 834019fca096065c34e7383ae283cad2 550 Pfam PF02470 MlaD protein 45 136 4.2E-11 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS07970 834019fca096065c34e7383ae283cad2 550 Pfam PF02470 MlaD protein 162 220 3.9E-8 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS07970 834019fca096065c34e7383ae283cad2 550 Pfam PF02470 MlaD protein 292 393 7.9E-13 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS07970 834019fca096065c34e7383ae283cad2 550 PANTHER PTHR30462:SF2 1 550 0.0 T 22-04-2016 YPTB_RS07970 834019fca096065c34e7383ae283cad2 550 PANTHER PTHR30462 1 550 0.0 T 22-04-2016 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 SUPERFAMILY SSF63848 122 227 5.36E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 124 224 4.0E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 PANTHER PTHR34108:SF1 3 228 2.4E-81 T 22-04-2016 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 3.2E-34 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 Gene3D G3DSA:2.160.20.70 115 227 7.4E-39 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 PANTHER PTHR34108 3 228 2.4E-81 T 22-04-2016 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 227 1.9E-71 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 YPTB_RS11295 2c23978e623e648918887d5d65a0a12d 228 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 228 29.01 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 Pfam PF00005 ABC transporter 10 176 1.5E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 Pfam PF00005 ABC transporter 328 459 3.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 SMART SM00382 336 505 3.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 SMART SM00382 18 220 6.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 Gene3D G3DSA:3.40.50.300 310 520 5.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 Pfam PF12848 ABC transporter 216 301 1.3E-20 T 22-04-2016 IPR032781 ABC-transporter extension domain YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 PANTHER PTHR19211 1 519 0.0 T 22-04-2016 YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 SUPERFAMILY SSF52540 2 229 1.84E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 PANTHER PTHR19211:SF38 1 519 0.0 T 22-04-2016 YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 SUPERFAMILY SSF52540 290 515 5.73E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 Gene3D G3DSA:3.40.50.300 2 92 3.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08300 c8406d31196f089a3df4351e2b969dc6 523 Gene3D G3DSA:3.40.50.300 124 273 3.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00095 bd988da1d69750c8ec80e128f5ba2e09 512 SUPERFAMILY SSF52540 21 287 8.75E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00095 bd988da1d69750c8ec80e128f5ba2e09 512 Pfam PF12592 Protein of unknown function (DUF3763) 444 496 2.6E-19 T 22-04-2016 IPR022547 ATPase, RavA, C-terminal GO:0016820 YPTB_RS00095 bd988da1d69750c8ec80e128f5ba2e09 512 PANTHER PTHR32204 1 511 5.7E-151 T 22-04-2016 YPTB_RS00095 bd988da1d69750c8ec80e128f5ba2e09 512 Hamap MF_01625 ATPase RavA [ravA]. 1 502 59.881 T 22-04-2016 IPR023671 ATPase RavA GO:0005737|GO:0016887 YPTB_RS00095 bd988da1d69750c8ec80e128f5ba2e09 512 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 7.4E-24 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 YPTB_RS00095 bd988da1d69750c8ec80e128f5ba2e09 512 SMART SM00382 38 187 3.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS00095 bd988da1d69750c8ec80e128f5ba2e09 512 Gene3D G3DSA:3.40.50.300 25 184 7.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20190 b872eb6c64bed55c8ae57b42efea120d 513 PANTHER PTHR30121 26 449 9.1E-188 T 22-04-2016 YPTB_RS20190 b872eb6c64bed55c8ae57b42efea120d 513 Pfam PF05872 Bacterial protein of unknown function (DUF853) 17 513 4.6E-234 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal YPTB_RS20190 b872eb6c64bed55c8ae57b42efea120d 513 Gene3D G3DSA:3.40.50.300 212 389 1.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20190 b872eb6c64bed55c8ae57b42efea120d 513 Gene3D G3DSA:3.40.50.300 24 116 1.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20190 b872eb6c64bed55c8ae57b42efea120d 513 PANTHER PTHR30121:SF3 26 449 9.1E-188 T 22-04-2016 YPTB_RS20190 b872eb6c64bed55c8ae57b42efea120d 513 SUPERFAMILY SSF52540 8 377 3.86E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF46934 4 55 4.68E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 5.1E-116 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 PANTHER PTHR11741 1 285 1.2E-145 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:1.10.8.10 3 55 5.1E-27 T 22-04-2016 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF54713 56 141 7.63E-22 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 80.24 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF54713 144 283 3.79E-53 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:1.10.286.20 185 229 6.0E-21 T 22-04-2016 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 Pfam PF00889 Elongation factor TS 73 265 5.7E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:3.30.479.20 169 184 4.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:3.30.479.20 230 268 4.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPTB_RS16250 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:3.30.479.20 57 95 4.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPTB_RS02895 021fb8e4bf623bd8a980fd8a3c6b16d3 212 SMART SM00859 3 101 0.0054 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPTB_RS02895 021fb8e4bf623bd8a980fd8a3c6b16d3 212 SUPERFAMILY SSF51735 1 199 5.96E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02895 021fb8e4bf623bd8a980fd8a3c6b16d3 212 PANTHER PTHR14097 3 206 7.5E-67 T 22-04-2016 YPTB_RS02895 021fb8e4bf623bd8a980fd8a3c6b16d3 212 Gene3D G3DSA:3.40.50.720 2 207 9.5E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02895 021fb8e4bf623bd8a980fd8a3c6b16d3 212 PANTHER PTHR14097:SF7 3 206 7.5E-67 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF88697 10 201 7.46E-53 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 SMART SM00464 10 202 5.0E-84 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 4.0E-56 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 4.0E-56 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 4.0E-56 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 4.0E-56 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 4.0E-56 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PANTHER PTHR10046:SF43 8 776 0.0 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:3.40.50.300 312 499 2.4E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:3.30.230.10 590 771 7.4E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.2E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:1.10.8.60 500 583 2.7E-33 T 22-04-2016 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PANTHER PTHR10046 8 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF52540 313 586 3.95E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 PIRSF PIRSF001174 1 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 4.5E-44 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 SMART SM00382 348 492 6.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.135 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF54211 595 770 1.48E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS05325 f89865f9bec855ee7200119bdb887e77 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.0E-96 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 Pfam PF03466 LysR substrate binding domain 86 283 5.9E-41 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 Gene3D G3DSA:3.40.190.10 196 260 6.7E-9 T 22-04-2016 YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 Gene3D G3DSA:3.40.190.10 87 195 7.2E-13 T 22-04-2016 YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 PANTHER PTHR30126 1 307 6.0E-188 T 22-04-2016 YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 PANTHER PTHR30126:SF33 1 307 6.0E-188 T 22-04-2016 YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.7E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 SUPERFAMILY SSF46785 1 83 3.93E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 SUPERFAMILY SSF53850 86 287 5.25E-31 T 22-04-2016 YPTB_RS10605 aed13abf9056a07fa860f5501295086e 320 Gene3D G3DSA:1.10.10.10 1 83 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 PANTHER PTHR24322 154 183 3.0E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 PANTHER PTHR24322 12 138 3.0E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 241 2.1E-32 T 22-04-2016 YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 SUPERFAMILY SSF51735 9 243 1.4E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08150 d796f9caa36a7b0b02d9aeb24812e914 262 Gene3D G3DSA:3.40.50.720 2 244 3.8E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 SUPERFAMILY SSF55811 79 241 2.94E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 45.192 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 Pfam PF00293 NUDIX domain 131 234 1.4E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 PANTHER PTHR22769:SF7 85 254 1.5E-53 T 22-04-2016 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 PANTHER PTHR22769 85 254 1.5E-53 T 22-04-2016 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 SUPERFAMILY SSF55811 2 96 4.87E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 Gene3D G3DSA:3.90.79.10 93 244 4.1E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS01735 3876e96a5df4d5f3188a6c6975a29ec0 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.3E-9 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Pfam PF13332 Haemagluttinin repeat 639 798 4.2E-18 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Pfam PF13332 Haemagluttinin repeat 488 557 0.0055 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Pfam PF13332 Haemagluttinin repeat 819 906 3.0E-5 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Pfam PF13332 Haemagluttinin repeat 411 466 1.8E-5 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Pfam PF13332 Haemagluttinin repeat 1035 1165 7.0E-12 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Pfam PF13332 Haemagluttinin repeat 1233 1406 4.5E-33 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Gene3D G3DSA:2.160.20.10 46 334 4.5E-75 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 156 8.2E-17 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 Pfam PF05860 haemagglutination activity domain 47 167 5.4E-29 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 SUPERFAMILY SSF51126 48 332 1.44E-54 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 PANTHER PTHR32093:SF21 1 513 1.4E-135 T 22-04-2016 YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 PANTHER PTHR32093:SF21 1433 1438 1.4E-135 T 22-04-2016 YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 PANTHER PTHR32093 1 513 1.4E-135 T 22-04-2016 YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 PANTHER PTHR32093 1433 1438 1.4E-135 T 22-04-2016 YPTB_RS19745 dc61d7fca291fa1e040480f1e19d0543 1635 SMART SM00912 48 168 5.5E-43 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPTB_RS18240 511c7281d0ad59843d361df701a2c868 428 Pfam PF00437 Type II/IV secretion system protein 74 349 1.2E-82 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPTB_RS18240 511c7281d0ad59843d361df701a2c868 428 Gene3D G3DSA:3.30.450.90 70 167 6.1E-33 T 22-04-2016 YPTB_RS18240 511c7281d0ad59843d361df701a2c868 428 PANTHER PTHR30258 6 419 1.5E-138 T 22-04-2016 YPTB_RS18240 511c7281d0ad59843d361df701a2c868 428 SUPERFAMILY SSF52540 55 358 2.73E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18240 511c7281d0ad59843d361df701a2c868 428 Gene3D G3DSA:3.40.50.300 174 389 1.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18240 511c7281d0ad59843d361df701a2c868 428 PANTHER PTHR30258:SF3 6 419 1.5E-138 T 22-04-2016 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 PANTHER PTHR35892:SF2 2 183 1.7E-100 T 22-04-2016 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 SUPERFAMILY SSF56925 29 183 3.92E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 2.5E-20 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 Gene3D G3DSA:2.40.160.20 28 183 1.0E-34 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 PANTHER PTHR35892 2 183 1.7E-100 T 22-04-2016 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 98 121 1.1E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 55 67 1.1E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 171 182 1.1E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 144 165 1.1E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS09520 be40b729fdf684705a90459f45d7432b 183 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 175 183 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 Gene3D G3DSA:1.10.10.10 24 118 3.6E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 PIRSF PIRSF018282 1 440 3.8E-247 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 Pfam PF17193 MukF C-terminal domain 283 440 1.2E-78 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 Pfam PF17192 MukF middle domain 121 281 5.0E-85 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.174 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 75 - T 22-04-2016 IPR010916 TonB box, conserved site YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 Pfam PF03882 MukF winged-helix domain 3 117 3.2E-58 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 SUPERFAMILY SSF46785 8 118 5.17E-50 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07885 178e753a18dad2312dfb19151d7fe966 440 SUPERFAMILY SSF140570 119 281 1.96E-76 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain YPTB_RS02850 73254108abdab6572b8594bfc559b1ee 95 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 33.518 T 22-04-2016 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPTB_RS02850 73254108abdab6572b8594bfc559b1ee 95 PANTHER PTHR34477:SF1 1 91 2.4E-41 T 22-04-2016 YPTB_RS02850 73254108abdab6572b8594bfc559b1ee 95 Pfam PF01541 GIY-YIG catalytic domain 6 77 2.6E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPTB_RS02850 73254108abdab6572b8594bfc559b1ee 95 PANTHER PTHR34477 1 91 2.4E-41 T 22-04-2016 YPTB_RS02850 73254108abdab6572b8594bfc559b1ee 95 SUPERFAMILY SSF82771 5 76 6.41E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 SMART SM00481 29 96 4.8E-20 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 SUPERFAMILY SSF89550 28 109 3.92E-52 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 SUPERFAMILY SSF89550 191 301 3.92E-52 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 PANTHER PTHR30007:SF4 1 301 5.3E-112 T 22-04-2016 YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 Gene3D G3DSA:3.20.20.140 183 286 1.4E-41 T 22-04-2016 YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 Gene3D G3DSA:3.20.20.140 29 114 1.4E-41 T 22-04-2016 YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 PANTHER PTHR30007 1 301 5.3E-112 T 22-04-2016 YPTB_RS11660 396fee5ba92a20db9f172eba64240e33 311 Pfam PF02811 PHP domain 30 111 3.7E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 YPTB_RS13840 418cee8065e67993cb7d276e7762e0d9 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13840 418cee8065e67993cb7d276e7762e0d9 218 Gene3D G3DSA:1.10.3720.10 13 216 2.1E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13840 418cee8065e67993cb7d276e7762e0d9 218 PANTHER PTHR30614 1 218 6.2E-177 T 22-04-2016 YPTB_RS13840 418cee8065e67993cb7d276e7762e0d9 218 SUPERFAMILY SSF161098 13 201 1.7E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS13840 418cee8065e67993cb7d276e7762e0d9 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 6.8E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS13840 418cee8065e67993cb7d276e7762e0d9 218 PANTHER PTHR30614:SF13 1 218 6.2E-177 T 22-04-2016 YPTB_RS10160 d5b95836df6d10aa0f8f28936bc449fb 211 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 117 1.4E-43 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS10160 d5b95836df6d10aa0f8f28936bc449fb 211 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 208 6.5E-63 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 YPTB_RS05965 90241b120da54819515b91f49296cb16 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 1.0E-10 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YPTB_RS05965 90241b120da54819515b91f49296cb16 95 PANTHER PTHR33336 1 94 2.0E-33 T 22-04-2016 YPTB_RS05965 90241b120da54819515b91f49296cb16 95 Gene3D G3DSA:3.30.70.900 1 93 4.8E-26 T 22-04-2016 YPTB_RS05965 90241b120da54819515b91f49296cb16 95 SUPERFAMILY SSF54909 1 90 9.08E-25 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS05965 90241b120da54819515b91f49296cb16 95 PANTHER PTHR33336:SF3 1 94 2.0E-33 T 22-04-2016 YPTB_RS00485 5ec3dca28eee6311c9d0a5abac553886 475 PIRSF PIRSF002457 1 474 2.5E-131 T 22-04-2016 IPR030676 Citrate carrier CitT-related YPTB_RS00485 5ec3dca28eee6311c9d0a5abac553886 475 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 1.5E-131 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS00485 5ec3dca28eee6311c9d0a5abac553886 475 PANTHER PTHR10283:SF89 1 472 4.7E-295 T 22-04-2016 YPTB_RS00485 5ec3dca28eee6311c9d0a5abac553886 475 PANTHER PTHR10283 1 472 4.7E-295 T 22-04-2016 YPTB_RS00485 5ec3dca28eee6311c9d0a5abac553886 475 Pfam PF00939 Sodium:sulfate symporter transmembrane region 3 473 1.0E-144 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS05585 83a55277ec6b04e9d0387a78efd51ea4 247 Pfam PF00535 Glycosyl transferase family 2 4 126 1.9E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPTB_RS05585 83a55277ec6b04e9d0387a78efd51ea4 247 PANTHER PTHR22916:SF4 1 234 4.1E-90 T 22-04-2016 YPTB_RS05585 83a55277ec6b04e9d0387a78efd51ea4 247 Gene3D G3DSA:3.90.550.10 1 207 1.2E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS05585 83a55277ec6b04e9d0387a78efd51ea4 247 SUPERFAMILY SSF53448 2 203 7.41E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS05585 83a55277ec6b04e9d0387a78efd51ea4 247 PANTHER PTHR22916 1 234 4.1E-90 T 22-04-2016 YPTB_RS07585 e4e2d6ab49d518d1f2a562e6987e3f72 265 PANTHER PTHR32266 1 259 4.6E-58 T 22-04-2016 YPTB_RS07585 e4e2d6ab49d518d1f2a562e6987e3f72 265 SUPERFAMILY SSF51735 113 219 6.96E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07585 e4e2d6ab49d518d1f2a562e6987e3f72 265 Pfam PF03059 Nicotianamine synthase protein 8 229 1.6E-12 T 22-04-2016 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 YPTB_RS07585 e4e2d6ab49d518d1f2a562e6987e3f72 265 Gene3D G3DSA:3.40.50.720 114 198 2.8E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 SUPERFAMILY SSF46785 2 109 3.97E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 Pfam PF03466 LysR substrate binding domain 89 289 7.1E-48 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:3.40.190.10 225 254 9.4E-4 T 22-04-2016 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 PANTHER PTHR30126:SF36 2 289 1.9E-202 T 22-04-2016 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 PANTHER PTHR30126 2 289 1.9E-202 T 22-04-2016 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:1.10.10.10 2 82 8.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 SUPERFAMILY SSF53850 89 289 3.75E-47 T 22-04-2016 YPTB_RS07400 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:3.40.190.10 89 224 3.6E-34 T 22-04-2016 YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 SMART SM00382 33 223 6.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 SMART SM00382 299 495 1.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 Pfam PF00005 ABC transporter 290 444 2.7E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 Pfam PF00005 ABC transporter 24 175 3.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 SUPERFAMILY SSF52540 9 233 3.86E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 PANTHER PTHR24220:SF308 10 399 1.2E-126 T 22-04-2016 YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 Gene3D G3DSA:3.40.50.300 273 506 5.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 Gene3D G3DSA:3.40.50.300 8 240 1.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 SUPERFAMILY SSF52540 285 504 6.97E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS08615 858f68e3a9b42929139fd514712d8cae 518 PANTHER PTHR24220 10 399 1.2E-126 T 22-04-2016 YPTB_RS01495 5bc2cb5e117a066d3e13dacca64c97f7 216 SUPERFAMILY SSF55718 37 133 2.67E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPTB_RS01495 5bc2cb5e117a066d3e13dacca64c97f7 216 Pfam PF02036 SCP-2 sterol transfer family 34 128 1.0E-19 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPTB_RS01495 5bc2cb5e117a066d3e13dacca64c97f7 216 PANTHER PTHR38693 11 216 6.0E-75 T 22-04-2016 YPTB_RS01495 5bc2cb5e117a066d3e13dacca64c97f7 216 PANTHER PTHR38693:SF1 11 216 6.0E-75 T 22-04-2016 YPTB_RS06465 5090e086e96ff52eeb5a715e29ae24d1 350 SUPERFAMILY SSF51569 7 348 1.36E-137 T 22-04-2016 YPTB_RS06465 5090e086e96ff52eeb5a715e29ae24d1 350 Gene3D G3DSA:3.20.20.70 9 350 1.5E-160 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS06465 5090e086e96ff52eeb5a715e29ae24d1 350 Pfam PF00793 DAHP synthetase I family 41 338 4.4E-107 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS06465 5090e086e96ff52eeb5a715e29ae24d1 350 PANTHER PTHR21225 1 350 1.4E-263 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS06465 5090e086e96ff52eeb5a715e29ae24d1 350 PIRSF PIRSF001361 1 350 3.6E-164 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS06465 5090e086e96ff52eeb5a715e29ae24d1 350 PANTHER PTHR21225:SF7 1 350 1.4E-263 T 22-04-2016 YPTB_RS06465 5090e086e96ff52eeb5a715e29ae24d1 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.6E-176 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 PIRSF PIRSF006281 1 517 3.1E-243 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 SUPERFAMILY SSF74650 29 400 8.47E-166 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 3.0E-198 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 Gene3D G3DSA:2.60.40.10 405 516 8.4E-41 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 PANTHER PTHR30504:SF4 11 517 0.0 T 22-04-2016 YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 12 515 61.974 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 SUPERFAMILY SSF81296 403 516 8.54E-33 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 Gene3D G3DSA:2.70.98.10 28 401 5.7E-175 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPTB_RS13555 080a60436c6b036d1962cdf66587efc9 517 PANTHER PTHR30504 11 517 0.0 T 22-04-2016 YPTB_RS19245 85e4c91e9c79fd07ac744a9d439caaa1 481 SUPERFAMILY SSF111283 22 480 6.28E-131 T 22-04-2016 YPTB_RS19245 85e4c91e9c79fd07ac744a9d439caaa1 481 PANTHER PTHR30624 9 481 2.8E-261 T 22-04-2016 YPTB_RS19245 85e4c91e9c79fd07ac744a9d439caaa1 481 PANTHER PTHR30624:SF4 9 481 2.8E-261 T 22-04-2016 YPTB_RS19245 85e4c91e9c79fd07ac744a9d439caaa1 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 5.6E-63 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS19245 85e4c91e9c79fd07ac744a9d439caaa1 481 PIRSF PIRSF004919 14 481 1.5E-145 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:1.20.1580.10 407 477 6.8E-54 T 22-04-2016 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:1.20.1580.10 91 129 6.8E-54 T 22-04-2016 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:1.20.1580.10 251 284 6.8E-54 T 22-04-2016 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:3.40.50.300 821 942 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:3.40.50.300 2 51 1.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:3.40.50.300 612 672 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:3.40.50.300 478 596 1.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 SUPERFAMILY SSF52540 619 911 1.77E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 PANTHER PTHR32282:SF2 1 946 0.0 T 22-04-2016 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:3.30.1490.20 130 153 4.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:3.30.1490.20 200 248 4.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:1.10.8.280 286 406 1.5E-42 T 22-04-2016 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.947 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Gene3D G3DSA:1.20.1580.10 694 820 1.9E-54 T 22-04-2016 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 PANTHER PTHR32282 1 946 0.0 T 22-04-2016 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 Pfam PF00005 ABC transporter 623 860 1.7E-8 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 SUPERFAMILY SSF52540 1 204 1.64E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02195 57b4914e5dcfd5a62eff820d8efd53f8 947 SUPERFAMILY SSF52540 430 569 1.64E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10770 cad24af0f4ad682afbbd80407032a8aa 330 SUPERFAMILY SSF53187 1 320 7.61E-88 T 22-04-2016 YPTB_RS10770 cad24af0f4ad682afbbd80407032a8aa 330 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 330 147.608 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YPTB_RS10770 cad24af0f4ad682afbbd80407032a8aa 330 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 322 2.2E-73 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 YPTB_RS10770 cad24af0f4ad682afbbd80407032a8aa 330 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 9.6E-153 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YPTB_RS10770 cad24af0f4ad682afbbd80407032a8aa 330 PANTHER PTHR15162 1 326 1.6E-112 T 22-04-2016 YPTB_RS10770 cad24af0f4ad682afbbd80407032a8aa 330 Gene3D G3DSA:3.40.630.10 39 235 5.6E-17 T 22-04-2016 YPTB_RS10770 cad24af0f4ad682afbbd80407032a8aa 330 PIRSF PIRSF017020 1 327 6.1E-125 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 Pfam PF00005 ABC transporter 39 195 5.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 SUPERFAMILY SSF52540 21 256 1.45E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 PANTHER PTHR24220 25 269 6.0E-129 T 22-04-2016 YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 2.0E-117 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 PANTHER PTHR24220:SF585 25 269 6.0E-129 T 22-04-2016 YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 Gene3D G3DSA:3.40.50.300 23 264 2.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15155 0353af32e1cfe51bfa06226216456b24 270 SMART SM00382 48 242 3.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.948 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 PANTHER PTHR30560 1 430 6.4E-152 T 22-04-2016 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:1.10.3120.10 216 388 4.5E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF102735 1 131 1.7E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 PANTHER PTHR30560:SF3 1 430 6.4E-152 T 22-04-2016 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:3.30.70.1050 1 118 9.7E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF54534 96 240 9.82E-37 T 22-04-2016 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 230 5.5E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF109998 248 429 4.32E-48 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 4.8E-144 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.2E-40 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:3.10.50.40 152 215 1.5E-9 T 22-04-2016 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.7E-44 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YPTB_RS05310 2a4e7e7a4452dd643fdf525ec2a51a89 434 PIRSF PIRSF003095 1 434 3.0E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YPTB_RS03370 53515597cbf74c2c8c229c6e8ec3e1db 180 PANTHER PTHR34699 1 174 2.3E-116 T 22-04-2016 YPTB_RS03370 53515597cbf74c2c8c229c6e8ec3e1db 180 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 2.8E-50 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase YPTB_RS03370 53515597cbf74c2c8c229c6e8ec3e1db 180 Pfam PF01931 Protein of unknown function DUF84 7 166 5.0E-52 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPTB_RS03370 53515597cbf74c2c8c229c6e8ec3e1db 180 Gene3D G3DSA:3.90.950.10 2 168 2.8E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS03370 53515597cbf74c2c8c229c6e8ec3e1db 180 PANTHER PTHR34699:SF3 1 174 2.3E-116 T 22-04-2016 YPTB_RS03370 53515597cbf74c2c8c229c6e8ec3e1db 180 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.187 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase YPTB_RS03370 53515597cbf74c2c8c229c6e8ec3e1db 180 SUPERFAMILY SSF52972 1 169 1.4E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 2.6E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 Gene3D G3DSA:3.40.50.2300 53 173 5.2E-28 T 22-04-2016 YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 310 2.9E-33 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 SUPERFAMILY SSF47413 2 58 2.69E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 PANTHER PTHR30146 1 326 1.7E-67 T 22-04-2016 YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 Gene3D G3DSA:1.10.260.40 1 52 5.9E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 SUPERFAMILY SSF53822 57 319 1.04E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 SMART SM00354 1 70 9.3E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS08865 6e69791c67a9db2604c7213c2ea64aea 338 Gene3D G3DSA:3.40.50.2300 174 313 1.1E-27 T 22-04-2016 YPTB_RS14190 8cf783548f0e6631195270410c351170 220 Pfam PF09335 SNARE associated Golgi protein 49 177 8.1E-27 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPTB_RS14190 8cf783548f0e6631195270410c351170 220 PANTHER PTHR30353:SF0 1 220 1.3E-102 T 22-04-2016 YPTB_RS14190 8cf783548f0e6631195270410c351170 220 PANTHER PTHR30353 1 220 1.3E-102 T 22-04-2016 IPR032818 DedA family YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 Pfam PF13407 Periplasmic binding protein domain 68 314 8.1E-16 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 Gene3D G3DSA:3.40.50.2300 184 308 2.6E-18 T 22-04-2016 YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 Gene3D G3DSA:1.10.260.40 8 59 1.0E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 SMART SM00354 7 77 4.5E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 4.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 PANTHER PTHR30146:SF54 7 332 1.0E-197 T 22-04-2016 YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 Gene3D G3DSA:3.40.50.2300 60 183 2.2E-33 T 22-04-2016 YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 SUPERFAMILY SSF47413 7 65 1.97E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 SUPERFAMILY SSF53822 65 319 8.78E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS13760 1150c775df713f58995966457d4adb8d 334 PANTHER PTHR30146 7 332 1.0E-197 T 22-04-2016 YPTB_RS02360 4f278be45f0104b000392c8a8fd068ea 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.237 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPTB_RS02360 4f278be45f0104b000392c8a8fd068ea 130 PIRSF PIRSF000180 2 130 7.0E-56 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPTB_RS02360 4f278be45f0104b000392c8a8fd068ea 130 SUPERFAMILY SSF81343 2 129 5.56E-56 T 22-04-2016 YPTB_RS02360 4f278be45f0104b000392c8a8fd068ea 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 114 6.0E-58 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPTB_RS02360 4f278be45f0104b000392c8a8fd068ea 130 Gene3D G3DSA:1.20.1300.10 3 129 2.1E-54 T 22-04-2016 YPTB_RS02360 4f278be45f0104b000392c8a8fd068ea 130 Pfam PF02300 Fumarate reductase subunit C 3 128 4.8E-53 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.2E-27 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 6.5E-105 T 22-04-2016 YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.9E-89 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 SUPERFAMILY SSF56219 1 268 1.83E-88 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 PANTHER PTHR22748:SF7 1 268 1.5E-139 T 22-04-2016 YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 PANTHER PTHR22748 1 268 1.5E-139 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YPTB_RS11460 9b272fd0c12ddcb3fd5d8b4698dee850 268 Gene3D G3DSA:3.60.10.10 1 267 6.3E-86 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SMART SM00357 5 69 6.9E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.5E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SUPERFAMILY SSF50249 3 68 9.14E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PIRSF PIRSF002599 1 69 5.8E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 27 36 1.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 42 60 1.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 6 21 1.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PANTHER PTHR11544 1 69 2.7E-42 T 22-04-2016 YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Gene3D G3DSA:2.40.50.140 4 67 7.9E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS05995 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 Gene3D G3DSA:3.90.25.10 184 335 5.4E-13 T 22-04-2016 YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 SUPERFAMILY SSF51735 1 330 8.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 Gene3D G3DSA:3.40.50.720 1 183 1.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 PANTHER PTHR10366 289 336 6.1E-203 T 22-04-2016 YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 PANTHER PTHR10366 2 265 6.1E-203 T 22-04-2016 YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 3.9E-33 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 PANTHER PTHR10366:SF409 289 336 6.1E-203 T 22-04-2016 YPTB_RS10815 6ff9b974b039f624979009bded4dfd59 338 PANTHER PTHR10366:SF409 2 265 6.1E-203 T 22-04-2016 YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 Pfam PF13649 Methyltransferase domain 80 178 1.1E-13 T 22-04-2016 YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 Gene3D G3DSA:3.40.50.150 39 261 2.5E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 PIRSF PIRSF006325 21 263 3.0E-134 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 PANTHER PTHR10108:SF809 24 261 1.8E-114 T 22-04-2016 YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 PANTHER PTHR10108 24 261 1.8E-114 T 22-04-2016 YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 24 262 1.1E-125 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 SUPERFAMILY SSF53335 40 262 1.16E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS11150 631e762c89ddde1d18f436150e1dd117 267 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 23 262 42.661 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 4.5E-124 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 SUPERFAMILY SSF160544 244 351 2.75E-40 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 PANTHER PTHR30531:SF0 3 361 2.1E-160 T 22-04-2016 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 2.8E-133 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 Gene3D G3DSA:3.40.1690.10 218 357 1.2E-63 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB_RS09170 f9d5bcc697d57f48fb6fb552d0873598 386 PANTHER PTHR30531 3 361 2.1E-160 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS00910 1162a8c0320a0955030e2f1f130d413d 84 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 83 2.0E-30 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00910 1162a8c0320a0955030e2f1f130d413d 84 Gene3D G3DSA:1.10.1200.20 1 84 2.1E-30 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00910 1162a8c0320a0955030e2f1f130d413d 84 SUPERFAMILY SSF47345 1 84 9.68E-35 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00910 1162a8c0320a0955030e2f1f130d413d 84 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 10 83 5.0E-38 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00910 1162a8c0320a0955030e2f1f130d413d 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 4 22 7.5E-20 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00910 1162a8c0320a0955030e2f1f130d413d 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 62 83 7.5E-20 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00910 1162a8c0320a0955030e2f1f130d413d 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 39 55 7.5E-20 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS12045 3b8c14ecadae8bc2ab6150133370af92 217 SUPERFAMILY SSF141318 53 217 2.22E-50 T 22-04-2016 YPTB_RS12045 3b8c14ecadae8bc2ab6150133370af92 217 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 24 214 1.6E-50 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPTB_RS12045 3b8c14ecadae8bc2ab6150133370af92 217 PIRSF PIRSF033535 7 217 3.9E-52 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPTB_RS12075 c9d708e9589891d70bf5b41881d939e4 1017 Pfam PF07520 Virulence factor SrfB 1 1014 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB YPTB_RS12075 c9d708e9589891d70bf5b41881d939e4 1017 PIRSF PIRSF034585 1 1017 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB YPTB_RS12075 c9d708e9589891d70bf5b41881d939e4 1017 Gene3D G3DSA:3.30.420.40 562 656 6.6E-5 T 22-04-2016 YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 Pfam PF13599 Pentapeptide repeats (9 copies) 541 605 7.7E-7 T 22-04-2016 IPR001646 Pentapeptide repeat YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 Pfam PF13599 Pentapeptide repeats (9 copies) 424 498 1.6E-12 T 22-04-2016 IPR001646 Pentapeptide repeat YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 Pfam PF13599 Pentapeptide repeats (9 copies) 637 711 1.6E-15 T 22-04-2016 IPR001646 Pentapeptide repeat YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 Gene3D G3DSA:2.160.20.10 432 599 4.4E-5 T 22-04-2016 IPR012334 Pectin lyase fold YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 9 285 4.4E-30 T 22-04-2016 IPR018683 Domain of unknown function DUF2169 YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 SUPERFAMILY SSF141571 424 534 3.53E-21 T 22-04-2016 YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 SUPERFAMILY SSF141571 611 709 3.01E-19 T 22-04-2016 YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 SUPERFAMILY SSF141571 508 605 3.79E-12 T 22-04-2016 YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 PANTHER PTHR14136:SF0 364 710 3.2E-100 T 22-04-2016 YPTB_RS03635 97548caf5d50d349faf23350ff12adc8 739 PANTHER PTHR14136 364 710 3.2E-100 T 22-04-2016 YPTB_RS15800 453f2492f5b3a76abb301ffe4851d75d 37 PANTHER PTHR34319 2 36 8.8E-14 T 22-04-2016 YPTB_RS15800 453f2492f5b3a76abb301ffe4851d75d 37 PANTHER PTHR34319:SF1 2 36 8.8E-14 T 22-04-2016 YPTB_RS17570 65282723916bb7a4008f96d61491dc1c 740 SUPERFAMILY SSF53955 596 717 1.01E-6 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS17570 65282723916bb7a4008f96d61491dc1c 740 SUPERFAMILY SSF53955 494 537 1.01E-6 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS17570 65282723916bb7a4008f96d61491dc1c 740 Gene3D G3DSA:2.70.70.10 17 157 2.8E-8 T 22-04-2016 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 3.4E-104 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 Gene3D G3DSA:3.40.1160.10 3 239 1.3E-86 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 SUPERFAMILY SSF53633 7 239 6.28E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.036 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 PIRSF PIRSF005650 4 241 2.3E-90 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 Pfam PF00696 Amino acid kinase family 11 219 8.8E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 PANTHER PTHR21499 4 239 2.9E-113 T 22-04-2016 YPTB_RS16245 1da0de38868595c37a500222ecedbddd 241 PANTHER PTHR21499:SF23 4 239 2.9E-113 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 Gene3D G3DSA:3.90.190.10 285 436 2.7E-19 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 SMART SM00404 337 428 0.0077 T 22-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 SUPERFAMILY SSF52799 285 436 1.36E-22 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 Pfam PF00782 Dual specificity phosphatase, catalytic domain 346 431 2.5E-14 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 Pfam PF14378 PAP2 superfamily 78 200 1.1E-8 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 SMART SM00195 302 433 8.4E-8 T 22-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 PANTHER PTHR10159 290 434 2.1E-63 T 22-04-2016 IPR024950 Dual specificity phosphatase YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 PANTHER PTHR10159 62 274 2.1E-63 T 22-04-2016 IPR024950 Dual specificity phosphatase YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 PANTHER PTHR10159:SF370 290 434 2.1E-63 T 22-04-2016 YPTB_RS05775 2db18bc1d5f4f4aade6e60817e5c272d 439 PANTHER PTHR10159:SF370 62 274 2.1E-63 T 22-04-2016 YPTB_RS06070 150956a1e3a738c7b064580ec4fba705 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 27.689 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YPTB_RS06070 150956a1e3a738c7b064580ec4fba705 207 PANTHER PTHR38098 1 207 6.3E-78 T 22-04-2016 YPTB_RS06070 150956a1e3a738c7b064580ec4fba705 207 Gene3D G3DSA:3.30.160.150 20 171 1.1E-61 T 22-04-2016 YPTB_RS06070 150956a1e3a738c7b064580ec4fba705 207 PANTHER PTHR38098:SF1 1 207 6.3E-78 T 22-04-2016 YPTB_RS06070 150956a1e3a738c7b064580ec4fba705 207 Pfam PF04390 Lipopolysaccharide-assembly 12 159 5.1E-20 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YPTB_RS16160 fc351bc81ac394254052a877243d2591 105 Gene3D G3DSA:1.10.760.10 18 104 7.0E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS16160 fc351bc81ac394254052a877243d2591 105 Pfam PF00034 Cytochrome c 34 104 3.1E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS16160 fc351bc81ac394254052a877243d2591 105 PANTHER PTHR33751 4 105 4.5E-30 T 22-04-2016 YPTB_RS16160 fc351bc81ac394254052a877243d2591 105 SUPERFAMILY SSF46626 33 104 4.8E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPTB_RS16160 fc351bc81ac394254052a877243d2591 105 PRINTS PR00605 Class IC cytochrome C signature 78 100 7.4E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YPTB_RS16160 fc351bc81ac394254052a877243d2591 105 PRINTS PR00605 Class IC cytochrome C signature 33 44 7.4E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YPTB_RS16160 fc351bc81ac394254052a877243d2591 105 PANTHER PTHR33751:SF3 4 105 4.5E-30 T 22-04-2016 YPTB_RS12670 636d6eb7a21d564145a86e4d75591ed9 128 SUPERFAMILY SSF103481 42 124 4.58E-11 T 22-04-2016 YPTB_RS12670 636d6eb7a21d564145a86e4d75591ed9 128 PANTHER PTHR30561:SF9 25 127 7.8E-13 T 22-04-2016 YPTB_RS12670 636d6eb7a21d564145a86e4d75591ed9 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 23.171 T 22-04-2016 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF UniPathway: UPA00030 YPTB_RS12670 636d6eb7a21d564145a86e4d75591ed9 128 PANTHER PTHR30561 25 127 7.8E-13 T 22-04-2016 YPTB_RS08285 d833f76e3f28b0578965efac56c6a800 150 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 116 6.8E-24 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein YPTB_RS08285 d833f76e3f28b0578965efac56c6a800 150 SUPERFAMILY SSF160719 33 120 8.11E-17 T 22-04-2016 YPTB_RS08285 d833f76e3f28b0578965efac56c6a800 150 Gene3D G3DSA:3.10.450.40 35 117 6.2E-9 T 22-04-2016 YPTB_RS08285 d833f76e3f28b0578965efac56c6a800 150 Pfam PF04965 Gene 25-like lysozyme 35 116 3.6E-9 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 Gene3D G3DSA:3.30.499.10 341 474 1.7E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 Gene3D G3DSA:3.40.1060.10 172 287 1.7E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PANTHER PTHR11670:SF38 333 475 6.7E-273 T 22-04-2016 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PANTHER PTHR11670:SF38 9 313 6.7E-273 T 22-04-2016 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 Gene3D G3DSA:3.30.499.10 8 164 3.0E-24 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 7 472 61.757 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 SUPERFAMILY SSF53732 7 472 1.44E-168 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 8 471 1.6E-266 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 Pfam PF00330 Aconitase family (aconitate hydratase) 14 463 6.3E-157 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PANTHER PTHR11670 333 475 6.7E-273 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PANTHER PTHR11670 9 313 6.7E-273 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 139 154 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 349 360 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 88 101 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 215 228 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 292 306 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 201 214 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 114 122 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 125 138 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS03745 8bc0b8c5ebb76435ae08d7d76fe8e380 476 PRINTS PR00415 Aconitase family signature 405 418 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPTB_RS02890 6958dfdc7737a382d8aeafe8568ae4b0 147 Gene3D G3DSA:2.30.110.10 6 144 2.0E-9 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS02890 6958dfdc7737a382d8aeafe8568ae4b0 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 37.016 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 YPTB_RS02890 6958dfdc7737a382d8aeafe8568ae4b0 147 PIRSF PIRSF009554 3 147 2.2E-64 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 YPTB_RS02890 6958dfdc7737a382d8aeafe8568ae4b0 147 SUPERFAMILY SSF50475 10 142 1.43E-12 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS21630 d7cab2e427d0941155eff28ad2d82763 152 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 8 151 23.921 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YPTB_RS21630 d7cab2e427d0941155eff28ad2d82763 152 SUPERFAMILY SSF52540 11 147 2.61E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21630 d7cab2e427d0941155eff28ad2d82763 152 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 4 150 1.7E-66 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YPTB_RS21630 d7cab2e427d0941155eff28ad2d82763 152 Gene3D G3DSA:3.40.50.300 6 150 2.4E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21630 d7cab2e427d0941155eff28ad2d82763 152 Pfam PF01926 50S ribosome-binding GTPase 22 140 4.4E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS21630 d7cab2e427d0941155eff28ad2d82763 152 PANTHER PTHR11649 1 152 1.0E-49 T 22-04-2016 YPTB_RS03650 52632b49181d264d90dc896f52cbe840 121 Pfam PF13665 Domain of unknown function (DUF4150) 18 106 1.7E-12 T 22-04-2016 IPR025425 Domain of unknown function DUF4150 YPTB_RS08305 c07ebf7b8f2d3c71a7508644d0615ddb 215 Pfam PF16809 NleF caspase inhibitor 56 207 2.8E-54 T 22-04-2016 IPR031829 Effector protein NleF YPTB_RS17980 aec42f5f0ab58303ba39a96a7aebe0c2 127 Pfam PF02561 Flagellar protein FliS 11 124 2.1E-29 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS17980 aec42f5f0ab58303ba39a96a7aebe0c2 127 Gene3D G3DSA:1.20.120.340 11 125 1.3E-32 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS17980 aec42f5f0ab58303ba39a96a7aebe0c2 127 TIGRFAM TIGR00208 fliS: flagellar protein FliS 10 123 8.5E-22 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS17980 aec42f5f0ab58303ba39a96a7aebe0c2 127 PANTHER PTHR34773 1 125 2.2E-43 T 22-04-2016 YPTB_RS17980 aec42f5f0ab58303ba39a96a7aebe0c2 127 SUPERFAMILY SSF101116 11 125 4.32E-32 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS17980 aec42f5f0ab58303ba39a96a7aebe0c2 127 PIRSF PIRSF039090 1 127 2.2E-35 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPTB_RS06390 9c836096e8015734fed22a593e746e5c 142 PANTHER PTHR30558:SF7 1 141 6.9E-72 T 22-04-2016 YPTB_RS06390 9c836096e8015734fed22a593e746e5c 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 8.1E-38 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 YPTB_RS06390 9c836096e8015734fed22a593e746e5c 142 PANTHER PTHR30558 1 141 6.9E-72 T 22-04-2016 YPTB_RS06390 9c836096e8015734fed22a593e746e5c 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.1E-24 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PANTHER PTHR11014 330 486 3.8E-211 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 Pfam PF07687 Peptidase dimerisation domain 200 290 4.0E-5 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PANTHER PTHR11014:SF54 330 486 3.8E-211 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PANTHER PTHR11014:SF54 204 279 3.8E-211 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PANTHER PTHR11014:SF54 1 185 3.8E-211 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PIRSF PIRSF016599 1 485 1.2E-211 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PANTHER PTHR11014 204 279 3.8E-211 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 PANTHER PTHR11014 1 185 3.8E-211 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 Gene3D G3DSA:3.40.630.10 397 484 1.5E-110 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 Gene3D G3DSA:3.40.630.10 3 181 1.5E-110 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 2.1E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 SUPERFAMILY SSF53187 10 182 2.04E-66 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 SUPERFAMILY SSF53187 397 482 2.04E-66 T 22-04-2016 YPTB_RS04980 f1bf37ae2cc2d92fb05401972909bd9e 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 2.6E-183 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPTB_RS16115 0384a9761e5e6194318c4575e0fd5ee4 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 6.2E-144 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPTB_RS16115 0384a9761e5e6194318c4575e0fd5ee4 271 Gene3D G3DSA:3.40.190.10 30 162 8.3E-60 T 22-04-2016 YPTB_RS16115 0384a9761e5e6194318c4575e0fd5ee4 271 PANTHER PTHR30429 3 271 7.6E-157 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPTB_RS16115 0384a9761e5e6194318c4575e0fd5ee4 271 PIRSF PIRSF002854 1 271 1.2E-104 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPTB_RS16115 0384a9761e5e6194318c4575e0fd5ee4 271 PANTHER PTHR30429:SF1 3 271 7.6E-157 T 22-04-2016 YPTB_RS16115 0384a9761e5e6194318c4575e0fd5ee4 271 Pfam PF03180 NLPA lipoprotein 33 271 1.0E-98 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPTB_RS16115 0384a9761e5e6194318c4575e0fd5ee4 271 SUPERFAMILY SSF53850 33 271 4.35E-83 T 22-04-2016 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 PANTHER PTHR30328:SF8 1 230 8.7E-30 T 22-04-2016 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 SUPERFAMILY SSF48498 101 231 9.56E-37 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.1E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Gene3D G3DSA:1.10.357.10 64 233 6.0E-64 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.7E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.7E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Pfam PF09209 Domain of unknown function (DUF1956) 104 230 7.8E-35 T 22-04-2016 IPR015292 Transcription regulator YbiH, C-terminal YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 SUPERFAMILY SSF46689 13 94 3.75E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Gene3D G3DSA:1.10.10.60 12 63 1.9E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 PANTHER PTHR30328 1 230 8.7E-30 T 22-04-2016 YPTB_RS06720 dd9d1762d2ed0fa08fa7419d2971ea4b 236 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 SUPERFAMILY SSF53335 19 248 2.01E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 5.3E-87 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 PANTHER PTHR10108 1 251 5.7E-189 T 22-04-2016 YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.339 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 PANTHER PTHR10108:SF864 1 251 5.7E-189 T 22-04-2016 YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 Gene3D G3DSA:3.40.50.150 24 247 1.6E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS01490 7d0b164c6b62192ffe7c11ed768f290a 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 250 8.5E-107 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 Gene3D G3DSA:3.40.50.1970 2 172 2.8E-67 T 22-04-2016 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 Gene3D G3DSA:1.20.1090.10 173 355 8.2E-67 T 22-04-2016 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 Pfam PF01761 3-dehydroquinate synthase 67 326 1.2E-108 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 SUPERFAMILY SSF56796 4 357 1.7E-115 T 22-04-2016 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 PIRSF PIRSF001455 11 359 3.4E-105 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 359 43.389 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 2.0E-119 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS20270 641701b6900493686a5790cade6a71a4 362 PANTHER PTHR21090 1 361 4.9E-214 T 22-04-2016 YPTB_RS03570 35ad967b0633a724d3d1ad85f26c740a 780 Pfam PF03968 OstA-like protein 53 193 8.6E-30 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal YPTB_RS03570 35ad967b0633a724d3d1ad85f26c740a 780 Gene3D G3DSA:2.60.450.10 46 208 3.2E-24 T 22-04-2016 YPTB_RS03570 35ad967b0633a724d3d1ad85f26c740a 780 PANTHER PTHR30189 1 778 6.1E-138 T 22-04-2016 YPTB_RS03570 35ad967b0633a724d3d1ad85f26c740a 780 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 759 20.727 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 YPTB_RS03570 35ad967b0633a724d3d1ad85f26c740a 780 Pfam PF04453 Organic solvent tolerance protein 307 693 5.1E-107 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 YPTB_RS06115 6a190a68f62c5deffdb934d97ceadaef 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 23.599 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YPTB_RS06115 6a190a68f62c5deffdb934d97ceadaef 157 Pfam PF02130 Uncharacterized protein family UPF0054 21 143 5.1E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YPTB_RS06115 6a190a68f62c5deffdb934d97ceadaef 157 Gene3D G3DSA:3.40.390.30 12 153 6.2E-48 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 YPTB_RS06115 6a190a68f62c5deffdb934d97ceadaef 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site YPTB_RS06115 6a190a68f62c5deffdb934d97ceadaef 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.7E-35 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YPTB_RS06115 6a190a68f62c5deffdb934d97ceadaef 157 SUPERFAMILY SSF55486 4 151 4.64E-48 T 22-04-2016 YPTB_RS06115 6a190a68f62c5deffdb934d97ceadaef 157 PANTHER PTHR22881 2 154 7.9E-68 T 22-04-2016 YPTB_RS19840 9bb7240408d73d92bc0faf2260f9e03a 157 Hamap MF_00598 Protein Smg [smg]. 1 157 31.289 T 22-04-2016 IPR007456 Smg YPTB_RS19840 9bb7240408d73d92bc0faf2260f9e03a 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 6.6E-60 T 22-04-2016 IPR007456 Smg YPTB_RS19840 9bb7240408d73d92bc0faf2260f9e03a 157 PANTHER PTHR38692:SF1 1 157 2.9E-86 T 22-04-2016 YPTB_RS19840 9bb7240408d73d92bc0faf2260f9e03a 157 PANTHER PTHR38692 1 157 2.9E-86 T 22-04-2016 YPTB_RS09495 a647bf340b8c36b31a7b23aa81b690ac 434 PANTHER PTHR30521 56 434 8.5E-207 T 22-04-2016 YPTB_RS09495 a647bf340b8c36b31a7b23aa81b690ac 434 SUPERFAMILY SSF54909 66 427 3.93E-98 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS09495 a647bf340b8c36b31a7b23aa81b690ac 434 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 18 433 1.3E-168 T 22-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- YPTB_RS09495 a647bf340b8c36b31a7b23aa81b690ac 434 PANTHER PTHR30521:SF4 56 434 8.5E-207 T 22-04-2016 YPTB_RS09495 a647bf340b8c36b31a7b23aa81b690ac 434 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 73 421 1.9E-100 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPTB_RS09495 a647bf340b8c36b31a7b23aa81b690ac 434 Pfam PF04261 Dyp-type peroxidase family 73 421 3.2E-111 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPTB_RS07770 0e97b64c40203fc8f83f5c6b109acd34 224 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 53 115 9.4E-8 T 22-04-2016 IPR002654 Glycosyl transferase, family 25 YPTB_RS10370 761c501c40f02500d61fd1d8a65d0e8e 422 PANTHER PTHR23530:SF1 1 420 1.9E-29 T 22-04-2016 YPTB_RS10370 761c501c40f02500d61fd1d8a65d0e8e 422 Gene3D G3DSA:1.20.1250.20 223 410 1.1E-8 T 22-04-2016 YPTB_RS10370 761c501c40f02500d61fd1d8a65d0e8e 422 Gene3D G3DSA:1.20.1250.20 11 186 1.8E-13 T 22-04-2016 YPTB_RS10370 761c501c40f02500d61fd1d8a65d0e8e 422 SUPERFAMILY SSF103473 12 413 2.62E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS10370 761c501c40f02500d61fd1d8a65d0e8e 422 PANTHER PTHR23530 1 420 1.9E-29 T 22-04-2016 YPTB_RS10370 761c501c40f02500d61fd1d8a65d0e8e 422 Pfam PF07690 Major Facilitator Superfamily 26 335 1.2E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 PANTHER PTHR10000 1 322 7.9E-222 T 22-04-2016 YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 Gene3D G3DSA:3.40.50.1000 175 307 2.8E-38 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 7.1E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 2.3E-87 T 22-04-2016 YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 PANTHER PTHR10000:SF7 1 322 7.9E-222 T 22-04-2016 YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 147 282 1.0E-16 T 22-04-2016 YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 Gene3D G3DSA:1.10.150.210 123 174 3.5E-28 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 YPTB_RS03315 adea6d87aeebc1f454c03413023c996b 326 SUPERFAMILY SSF56784 112 316 1.11E-48 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 SMART SM00267 213 382 4.4E-16 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 SUPERFAMILY SSF55073 230 383 7.06E-19 T 22-04-2016 IPR029787 Nucleotide cyclase YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 Pfam PF00563 EAL domain 400 627 3.7E-38 T 22-04-2016 IPR001633 EAL domain YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 375 5.6E-22 T 22-04-2016 IPR000160 GGDEF domain YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 PANTHER PTHR33121:SF16 348 631 9.2E-16 T 22-04-2016 YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 PANTHER PTHR33121:SF16 31 38 9.2E-16 T 22-04-2016 YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 SMART SM00052 392 632 2.9E-24 T 22-04-2016 IPR001633 EAL domain YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 Gene3D G3DSA:3.30.70.270 227 387 1.7E-21 T 22-04-2016 YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 PANTHER PTHR33121 348 631 9.2E-16 T 22-04-2016 YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 PANTHER PTHR33121 31 38 9.2E-16 T 22-04-2016 YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 Gene3D G3DSA:3.20.20.450 395 631 1.4E-31 T 22-04-2016 IPR001633 EAL domain YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 SUPERFAMILY SSF141868 399 631 1.83E-34 T 22-04-2016 IPR001633 EAL domain YPTB_RS19285 0ecdc9c9c86c8cdefe7578d8b9296c33 638 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 2.5E-33 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PANTHER PTHR30386 1 120 2.1E-199 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PANTHER PTHR30386 157 442 2.1E-199 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 SUPERFAMILY SSF111369 65 124 7.06E-5 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 ProSitePatterns PS00543 HlyD family secretion proteins signature. 406 428 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 35 58 1.5E-50 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 421 1.5E-50 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 1.5E-50 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 367 1.5E-50 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 331 1.5E-50 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 441 1.5E-50 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 Pfam PF13437 HlyD family secretion protein 298 409 2.0E-13 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PANTHER PTHR30386:SF3 1 120 2.1E-199 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 PANTHER PTHR30386:SF3 157 442 2.1E-199 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 SUPERFAMILY SSF111369 230 342 4.84E-6 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 Gene3D G3DSA:2.40.50.100 295 329 2.8E-16 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 Gene3D G3DSA:2.40.50.100 68 99 2.8E-16 T 22-04-2016 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 28 442 3.5E-109 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 YPTB_RS00700 80ee5ddadffa0d4176153844cfbeff00 442 Pfam PF13533 Biotin-lipoyl like 69 111 1.2E-7 T 22-04-2016 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 Gene3D G3DSA:3.30.2010.10 74 156 1.7E-17 T 22-04-2016 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 PANTHER PTHR22726 35 357 4.1E-138 T 22-04-2016 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 Pfam PF14559 Tetratricopeptide repeat 360 425 4.1E-9 T 22-04-2016 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 489 31.606 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 SUPERFAMILY SSF48452 315 440 1.22E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 Gene3D G3DSA:1.25.40.10 314 461 2.6E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 Pfam PF01435 Peptidase family M48 78 265 1.1E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPTB_RS15110 4ba08300e4e384fc8de36c3057a11161 494 PANTHER PTHR22726:SF10 35 357 4.1E-138 T 22-04-2016 YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.329 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 Gene3D G3DSA:3.10.430.100 61 149 2.9E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 PANTHER PTHR21368 1 150 8.0E-53 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 Gene3D G3DSA:3.40.5.10 1 52 2.6E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 5.5E-58 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 3.9E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 SUPERFAMILY SSF55653 60 149 1.83E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YPTB_RS02540 4f15fa63384c41e4a50f109311453b3f 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 4.8E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 Gene3D G3DSA:1.20.1250.20 10 194 1.1E-29 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 PANTHER PTHR23501:SF36 7 465 0.0 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.9E-8 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.9E-8 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.9E-8 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 3.9E-8 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 3.9E-8 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 SUPERFAMILY SSF103473 244 451 1.57E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 SUPERFAMILY SSF103473 9 194 1.57E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 42.33 T 22-04-2016 IPR023721 Multidrug resistance protein MdtD, putative YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 Pfam PF07690 Major Facilitator Superfamily 15 405 1.2E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 PANTHER PTHR23501 7 465 0.0 T 22-04-2016 YPTB_RS15240 d68d4f27e2867540d74683436be39a6e 465 Gene3D G3DSA:1.20.1250.20 255 449 2.7E-12 T 22-04-2016 YPTB_RS04040 ed7f07eba3d8b397d608682118a92ce8 178 SUPERFAMILY SSF53271 3 174 5.11E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS04040 ed7f07eba3d8b397d608682118a92ce8 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 9.7E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPTB_RS04040 ed7f07eba3d8b397d608682118a92ce8 178 Gene3D G3DSA:3.40.50.2020 2 173 3.7E-79 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS04040 ed7f07eba3d8b397d608682118a92ce8 178 PANTHER PTHR22573:SF56 1 171 6.3E-82 T 22-04-2016 YPTB_RS04040 ed7f07eba3d8b397d608682118a92ce8 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 8.2E-74 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 YPTB_RS04040 ed7f07eba3d8b397d608682118a92ce8 178 PANTHER PTHR22573 1 171 6.3E-82 T 22-04-2016 YPTB_RS16555 e0ed1d3206108b5c6b8936f2ec865373 396 Pfam PF05134 Type II secretion system (T2SS), protein L 14 238 1.5E-73 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YPTB_RS16555 e0ed1d3206108b5c6b8936f2ec865373 396 SUPERFAMILY SSF53067 154 237 7.77E-14 T 22-04-2016 YPTB_RS16555 e0ed1d3206108b5c6b8936f2ec865373 396 Pfam PF12693 GspL periplasmic domain 245 395 3.4E-36 T 22-04-2016 IPR025691 GspL periplasmic domain YPTB_RS16555 e0ed1d3206108b5c6b8936f2ec865373 396 SUPERFAMILY SSF53067 13 151 5.96E-26 T 22-04-2016 YPTB_RS16555 e0ed1d3206108b5c6b8936f2ec865373 396 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 14 396 3.2E-107 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 YPTB_RS07535 44f3e868e858502eed11a40b04bdd665 321 Gene3D G3DSA:1.10.3720.10 31 310 4.0E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07535 44f3e868e858502eed11a40b04bdd665 321 PANTHER PTHR30193 11 321 1.8E-155 T 22-04-2016 YPTB_RS07535 44f3e868e858502eed11a40b04bdd665 321 PANTHER PTHR30193:SF5 11 321 1.8E-155 T 22-04-2016 YPTB_RS07535 44f3e868e858502eed11a40b04bdd665 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 317 4.5E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07535 44f3e868e858502eed11a40b04bdd665 321 SUPERFAMILY SSF161098 33 312 4.49E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14500 460984151cd7897e3f55a4c8747dfca6 445 PANTHER PTHR34496 1 354 0.0 T 22-04-2016 YPTB_RS14500 460984151cd7897e3f55a4c8747dfca6 445 PANTHER PTHR34496:SF5 1 354 0.0 T 22-04-2016 YPTB_RS14500 460984151cd7897e3f55a4c8747dfca6 445 SUPERFAMILY SSF53448 88 255 1.69E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS14500 460984151cd7897e3f55a4c8747dfca6 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 72 316 3.3E-59 T 22-04-2016 IPR021067 Glycosyltransferase, GlcNAc KEGG: 00052+2.4.1.22|UniPathway: UPA00378 YPTB_RS14500 460984151cd7897e3f55a4c8747dfca6 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 6 46 5.2E-9 T 22-04-2016 IPR021067 Glycosyltransferase, GlcNAc KEGG: 00052+2.4.1.22|UniPathway: UPA00378 YPTB_RS22190 8952707ea349150b1c96b6b8010e4a33 854 Pfam PF04829 Pre-toxin domain with VENN motif 461 510 7.0E-21 T 22-04-2016 IPR006914 VENN motif-containing domain YPTB_RS22190 8952707ea349150b1c96b6b8010e4a33 854 Pfam PF13332 Haemagluttinin repeat 1 107 2.7E-26 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS18355 0644eae135a740e8727e8097b6310b8e 193 SUPERFAMILY SSF53474 3 188 2.73E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS18355 0644eae135a740e8727e8097b6310b8e 193 Gene3D G3DSA:3.40.50.1820 3 179 1.0E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS18355 0644eae135a740e8727e8097b6310b8e 193 PANTHER PTHR35602:SF3 1 193 2.6E-130 T 22-04-2016 YPTB_RS18355 0644eae135a740e8727e8097b6310b8e 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 2.7E-69 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPTB_RS18355 0644eae135a740e8727e8097b6310b8e 193 PANTHER PTHR35602 1 193 2.6E-130 T 22-04-2016 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 Gene3D G3DSA:3.90.1150.10 248 382 1.1E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 Gene3D G3DSA:3.40.640.10 5 246 4.2E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 SUPERFAMILY SSF53383 5 381 6.39E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 PANTHER PTHR11808:SF15 1 385 4.2E-184 T 22-04-2016 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 PIRSF PIRSF001434 1 383 6.5E-135 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 PANTHER PTHR11808 1 385 4.2E-184 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 3.9E-142 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPTB_RS00635 c3728eac44535ef80554c37d439642ec 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 7.1E-207 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 YPTB_RS14955 a63b8f352b59e170a196b0a5b7e006de 155 PANTHER PTHR38604:SF1 1 155 1.1E-68 T 22-04-2016 YPTB_RS14955 a63b8f352b59e170a196b0a5b7e006de 155 PIRSF PIRSF006105 9 155 2.1E-52 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPTB_RS14955 a63b8f352b59e170a196b0a5b7e006de 155 Gene3D G3DSA:4.10.1020.10 68 135 6.8E-32 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain YPTB_RS14955 a63b8f352b59e170a196b0a5b7e006de 155 PANTHER PTHR38604 1 155 1.1E-68 T 22-04-2016 YPTB_RS14955 a63b8f352b59e170a196b0a5b7e006de 155 SUPERFAMILY SSF48695 54 150 7.49E-41 T 22-04-2016 IPR011031 Multihaem cytochrome YPTB_RS14955 a63b8f352b59e170a196b0a5b7e006de 155 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 42 149 4.9E-45 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPTB_RS18235 4024ff1c27279b1cd4c7ae2abde9a14b 375 Gene3D G3DSA:3.40.50.300 146 333 8.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS18235 4024ff1c27279b1cd4c7ae2abde9a14b 375 SUPERFAMILY SSF52540 144 330 1.38E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 SUPERFAMILY SSF46785 22 101 7.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 1.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 PANTHER PTHR30118 16 311 6.1E-160 T 22-04-2016 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 Pfam PF03466 LysR substrate binding domain 119 311 8.7E-20 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 191 284 1.3E-16 T 22-04-2016 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 PANTHER PTHR30118:SF6 16 311 6.1E-160 T 22-04-2016 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 SUPERFAMILY SSF53850 108 312 1.71E-42 T 22-04-2016 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 290 314 4.9E-21 T 22-04-2016 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 108 190 4.9E-21 T 22-04-2016 YPTB_RS03765 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:1.10.10.10 21 103 4.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS05000 48949eddca3d42d2eb7132ad7ead68e5 101 Pfam PF16083 LydA holin phage, holin superfamily III 15 93 1.2E-21 T 22-04-2016 IPR032126 LydA-like holin YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.906 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:3.40.440.10 196 266 4.6E-71 T 22-04-2016 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:3.40.440.10 3 94 4.6E-71 T 22-04-2016 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 PANTHER PTHR11846 1 429 3.9E-263 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 1.6E-202 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 SMART SM00788 4 425 8.2E-298 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:1.10.300.10 103 195 6.9E-37 T 22-04-2016 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.7E-177 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:3.90.170.10 267 426 4.5E-67 T 22-04-2016 YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 SUPERFAMILY SSF52540 3 431 3.72E-178 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02485 02a345d6601b0936c5115f56af628db9 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 YPTB_RS04355 a175ec40907aabce6175bc4754b5c36e 323 Gene3D G3DSA:1.10.10.10 23 60 1.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04355 a175ec40907aabce6175bc4754b5c36e 323 Pfam PF04198 Putative sugar-binding domain 63 317 4.8E-80 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPTB_RS04355 a175ec40907aabce6175bc4754b5c36e 323 SUPERFAMILY SSF100950 67 317 1.42E-69 T 22-04-2016 YPTB_RS04355 a175ec40907aabce6175bc4754b5c36e 323 Gene3D G3DSA:3.40.50.1360 67 319 8.6E-78 T 22-04-2016 YPTB_RS04355 a175ec40907aabce6175bc4754b5c36e 323 PANTHER PTHR34294 4 322 1.1E-145 T 22-04-2016 YPTB_RS04355 a175ec40907aabce6175bc4754b5c36e 323 PANTHER PTHR34294:SF5 4 322 1.1E-145 T 22-04-2016 YPTB_RS04355 a175ec40907aabce6175bc4754b5c36e 323 Pfam PF13518 Helix-turn-helix domain 17 53 5.7E-6 T 22-04-2016 YPTB_RS10875 b0b528400952d478e0dba821f8e5ba23 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 1.5E-23 T 22-04-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal YPTB_RS10875 b0b528400952d478e0dba821f8e5ba23 212 Pfam PF02502 Ribose/Galactose Isomerase 3 142 4.1E-29 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS10875 b0b528400952d478e0dba821f8e5ba23 212 PANTHER PTHR30345:SF0 1 212 3.1E-38 T 22-04-2016 YPTB_RS10875 b0b528400952d478e0dba821f8e5ba23 212 Gene3D G3DSA:3.40.1400.10 1 211 1.7E-94 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS10875 b0b528400952d478e0dba821f8e5ba23 212 SUPERFAMILY SSF89623 1 161 2.62E-35 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS10875 b0b528400952d478e0dba821f8e5ba23 212 PANTHER PTHR30345 1 212 3.1E-38 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPTB_RS12500 008863ee7a296a03607b11eae0e4b2ac 135 PANTHER PTHR10374 1 129 6.9E-59 T 22-04-2016 YPTB_RS12500 008863ee7a296a03607b11eae0e4b2ac 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.8E-67 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 YPTB_RS12500 008863ee7a296a03607b11eae0e4b2ac 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 YPTB_RS12500 008863ee7a296a03607b11eae0e4b2ac 135 SUPERFAMILY SSF54593 1 128 3.22E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB_RS12500 008863ee7a296a03607b11eae0e4b2ac 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.6E-26 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPTB_RS12500 008863ee7a296a03607b11eae0e4b2ac 135 Gene3D G3DSA:3.10.180.10 1 127 1.4E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 SMART SM00739 4 31 9.8E-4 T 22-04-2016 IPR005824 KOW YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 3.7E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 PANTHER PTHR12903 4 103 3.6E-50 T 22-04-2016 YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.3E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 SUPERFAMILY SSF50104 4 101 5.54E-33 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.948 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 Pfam PF00467 KOW motif 8 37 7.6E-5 T 22-04-2016 IPR005824 KOW YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19960 befa1f16cd3678b4fd32cb80030666d8 104 Gene3D G3DSA:2.30.30.30 3 92 8.6E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 Gene3D G3DSA:3.40.80.10 33 201 5.0E-57 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 Pfam PF01471 Putative peptidoglycan binding domain 218 269 1.8E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 183 2.5E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 SMART SM00644 36 182 2.4E-25 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 Gene3D G3DSA:1.10.101.10 217 254 6.9E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 SUPERFAMILY SSF47090 202 279 2.75E-22 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 PANTHER PTHR30417 1 283 3.6E-92 T 22-04-2016 YPTB_RS12880 7542ab4b2585da98311d33234dd5f939 283 SUPERFAMILY SSF55846 29 198 4.06E-52 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 5.6E-112 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 SUPERFAMILY SSF52540 2 231 1.0E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 SMART SM00382 26 223 2.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 Pfam PF00005 ABC transporter 17 172 2.2E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 PANTHER PTHR24220:SF85 3 248 4.4E-128 T 22-04-2016 YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 Gene3D G3DSA:3.40.50.300 1 235 6.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 PANTHER PTHR24220 3 248 4.4E-128 T 22-04-2016 YPTB_RS12605 d32d6264dd81fc78374439dd334bbbb7 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 SMART SM00062 42 263 2.7E-86 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 PANTHER PTHR18966:SF189 1 264 1.4E-181 T 22-04-2016 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 SUPERFAMILY SSF53850 15 264 6.73E-78 T 22-04-2016 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 2.5E-73 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 PANTHER PTHR18966 1 264 1.4E-181 T 22-04-2016 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 223 265 3.6E-49 T 22-04-2016 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 38 119 3.6E-49 T 22-04-2016 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 120 222 4.6E-31 T 22-04-2016 YPTB_RS09445 16e880f4004379e01e4965b42f418091 266 SMART SM00079 42 262 6.2E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YPTB_RS17810 b32baceadb4345632d60a4622e76fd45 422 PANTHER PTHR12778:SF11 7 421 6.7E-247 T 22-04-2016 YPTB_RS17810 b32baceadb4345632d60a4622e76fd45 422 SUPERFAMILY SSF103473 7 406 1.7E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS17810 b32baceadb4345632d60a4622e76fd45 422 PANTHER PTHR12778 7 421 6.7E-247 T 22-04-2016 YPTB_RS17810 b32baceadb4345632d60a4622e76fd45 422 Pfam PF07690 Major Facilitator Superfamily 11 329 5.5E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS17810 b32baceadb4345632d60a4622e76fd45 422 Gene3D G3DSA:1.20.1250.20 213 405 2.3E-12 T 22-04-2016 YPTB_RS17335 3c88f02d1589ff246f87787a5f38841b 106 PANTHER PTHR21496 1 102 4.3E-88 T 22-04-2016 YPTB_RS17335 3c88f02d1589ff246f87787a5f38841b 106 SUPERFAMILY SSF50022 1 103 5.11E-31 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS17335 3c88f02d1589ff246f87787a5f38841b 106 Pfam PF00355 Rieske [2Fe-2S] domain 3 88 2.7E-18 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS17335 3c88f02d1589ff246f87787a5f38841b 106 Gene3D G3DSA:2.102.10.10 1 103 1.3E-30 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPTB_RS17335 3c88f02d1589ff246f87787a5f38841b 106 PANTHER PTHR21496:SF7 1 102 4.3E-88 T 22-04-2016 YPTB_RS10960 6ea173bd679e4c8409a08dfc97cd0ebe 90 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 4.5E-45 T 22-04-2016 IPR019698 Protein of unknown function DUF2583 YPTB_RS08970 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 SUPERFAMILY SSF53335 4 242 3.29E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08970 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 Pfam PF13847 Methyltransferase domain 86 199 4.9E-11 T 22-04-2016 IPR025714 Methyltransferase domain YPTB_RS08970 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 PIRSF PIRSF018249 1 271 3.8E-84 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 YPTB_RS08970 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 PANTHER PTHR10108:SF886 17 270 4.8E-42 T 22-04-2016 YPTB_RS08970 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 PANTHER PTHR10108 17 270 4.8E-42 T 22-04-2016 YPTB_RS08970 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 Gene3D G3DSA:3.40.50.150 64 217 2.0E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 Pfam PF00293 NUDIX domain 5 134 4.8E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 SUPERFAMILY SSF55811 2 144 4.2E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 PANTHER PTHR22769 1 144 8.6E-69 T 22-04-2016 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 Gene3D G3DSA:3.90.79.10 1 143 9.9E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS11170 d3a60a23694ae1421be1fe7d6ec68548 147 PANTHER PTHR22769:SF28 1 144 8.6E-69 T 22-04-2016 YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 Pfam PF01569 PAP2 superfamily 80 228 4.0E-28 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 Gene3D G3DSA:1.20.144.10 41 228 4.6E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 SUPERFAMILY SSF48317 11 118 3.14E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 SUPERFAMILY SSF48317 150 237 3.14E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969:SF22 1 118 7.6E-108 T 22-04-2016 YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969:SF22 157 250 7.6E-108 T 22-04-2016 YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 SMART SM00014 77 227 6.3E-36 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969 1 118 7.6E-108 T 22-04-2016 YPTB_RS11725 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969 157 250 7.6E-108 T 22-04-2016 YPTB_RS11975 2dce5a8480609f30059cf01fc1033d17 123 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 29 123 2.0E-50 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 YPTB_RS11975 2dce5a8480609f30059cf01fc1033d17 123 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 123 32.539 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 YPTB_RS11975 2dce5a8480609f30059cf01fc1033d17 123 Pfam PF06932 Protein of unknown function (DUF1283) 41 123 2.8E-38 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 YPTB_RS01750 be9beb44b23a977f16ba3a6198c1b75c 234 PANTHER PTHR28511 5 227 1.2E-91 T 22-04-2016 YPTB_RS01750 be9beb44b23a977f16ba3a6198c1b75c 234 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.086 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 YPTB_RS01750 be9beb44b23a977f16ba3a6198c1b75c 234 Pfam PF04493 Endonuclease V 15 207 3.7E-72 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 YPTB_RS01750 be9beb44b23a977f16ba3a6198c1b75c 234 PANTHER PTHR28511:SF1 5 227 1.2E-91 T 22-04-2016 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 PANTHER PTHR24221:SF256 1 584 0.0 T 22-04-2016 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 Gene3D G3DSA:1.20.1560.10 12 323 4.4E-73 T 22-04-2016 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 SUPERFAMILY SSF52540 334 576 6.84E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 SUPERFAMILY SSF90123 12 324 7.06E-69 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 Pfam PF00664 ABC transporter transmembrane region 26 295 4.1E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 PANTHER PTHR24221 1 584 0.0 T 22-04-2016 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 SMART SM00382 366 557 5.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 Pfam PF00005 ABC transporter 357 505 9.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS05380 fbf00856c4857f678b3c9b4fb264391c 607 Gene3D G3DSA:3.40.50.300 341 582 3.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 Gene3D G3DSA:1.25.50.10 546 870 4.0E-128 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 Pfam PF01433 Peptidase family M1 23 384 1.0E-71 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 SUPERFAMILY SSF63737 1 193 2.88E-50 T 22-04-2016 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 Gene3D G3DSA:1.10.390.10 308 451 1.8E-33 T 22-04-2016 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PANTHER PTHR11533:SF152 609 869 0.0 T 22-04-2016 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PANTHER PTHR11533:SF152 10 586 0.0 T 22-04-2016 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PANTHER PTHR11533 609 869 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 PANTHER PTHR11533 10 586 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 5.9E-142 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 SUPERFAMILY SSF55486 204 450 3.66E-74 T 22-04-2016 YPTB_RS07935 87a750f2b930c6edfd6f18b425de5ec7 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 YPTB_RS19615 4905d38d99e20f0811c77d95133fcac7 228 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 41 228 1.4E-81 T 22-04-2016 IPR017738 Type VI secretion system-associated, VCA0118 YPTB_RS19615 4905d38d99e20f0811c77d95133fcac7 228 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 43 228 8.0E-63 T 22-04-2016 IPR017738 Type VI secretion system-associated, VCA0118 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 SUPERFAMILY SSF46689 244 290 1.12E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 SUPERFAMILY SSF46689 191 242 5.24E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 Pfam PF12833 Helix-turn-helix domain 214 289 1.0E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 29 179 5.3E-41 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 Gene3D G3DSA:1.10.10.60 247 289 5.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 Gene3D G3DSA:1.10.10.60 192 246 5.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 SMART SM00342 208 291 2.5E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 PANTHER PTHR11019:SF134 1 296 2.1E-173 T 22-04-2016 YPTB_RS18295 72a32b2082a4eb093c03b93fa4d7c6e4 297 PANTHER PTHR11019 1 296 2.1E-173 T 22-04-2016 YPTB_RS04030 d78ad99971c4ede6f7eea960215e33e4 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 7.3E-9 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPTB_RS04030 d78ad99971c4ede6f7eea960215e33e4 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 35 113 2.0E-42 T 22-04-2016 YPTB_RS04890 57392250376add3484ca4cdd09d9cf7f 596 PANTHER PTHR34597 1 596 1.2E-260 T 22-04-2016 YPTB_RS04890 57392250376add3484ca4cdd09d9cf7f 596 PANTHER PTHR34597:SF1 1 596 1.2E-260 T 22-04-2016 YPTB_RS04890 57392250376add3484ca4cdd09d9cf7f 596 Gene3D G3DSA:3.10.20.310 81 166 3.6E-13 T 22-04-2016 YPTB_RS04890 57392250376add3484ca4cdd09d9cf7f 596 Gene3D G3DSA:2.40.160.50 213 592 1.6E-41 T 22-04-2016 YPTB_RS04890 57392250376add3484ca4cdd09d9cf7f 596 Pfam PF08479 POTRA domain, ShlB-type 86 166 2.9E-13 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 Pfam PF00186 Dihydrofolate reductase 3 159 5.9E-59 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 PANTHER PTHR22778:SF16 1 160 1.3E-47 T 22-04-2016 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 PANTHER PTHR22778 1 160 1.3E-47 T 22-04-2016 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 SUPERFAMILY SSF53597 1 160 1.44E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 PIRSF PIRSF000194 1 160 1.1E-58 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPTB_RS03530 794d6c880217e31ee86c274376a58450 160 Gene3D G3DSA:3.40.430.10 1 160 2.8E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPTB_RS12055 25c8a327f2b27dcea5dfbf051d0a830e 273 Gene3D G3DSA:1.10.3720.10 71 265 3.7E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12055 25c8a327f2b27dcea5dfbf051d0a830e 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 264 3.8E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12055 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151:SF8 73 269 3.5E-107 T 22-04-2016 YPTB_RS12055 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151:SF8 2 55 3.5E-107 T 22-04-2016 YPTB_RS12055 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151 73 269 3.5E-107 T 22-04-2016 YPTB_RS12055 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151 2 55 3.5E-107 T 22-04-2016 YPTB_RS12055 25c8a327f2b27dcea5dfbf051d0a830e 273 SUPERFAMILY SSF161098 71 259 1.7E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 PANTHER PTHR11002 1 207 1.0E-137 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 SMART SM00947 30 192 4.1E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 Gene3D G3DSA:3.40.1050.10 1 216 1.6E-75 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 Pfam PF00484 Carbonic anhydrase 38 187 1.6E-49 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 SUPERFAMILY SSF53056 1 212 8.24E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS04045 c2ca37e909d37c20e37d939803c82435 220 PANTHER PTHR11002:SF11 1 207 1.0E-137 T 22-04-2016 YPTB_RS14005 56fc6812360c8a20be42c9fe714225e0 325 PANTHER PTHR11432 1 323 8.2E-244 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YPTB_RS14005 56fc6812360c8a20be42c9fe714225e0 325 Pfam PF00146 NADH dehydrogenase 17 316 1.9E-120 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YPTB_RS14005 56fc6812360c8a20be42c9fe714225e0 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 YPTB_RS14005 56fc6812360c8a20be42c9fe714225e0 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 YPTB_RS14005 56fc6812360c8a20be42c9fe714225e0 325 PANTHER PTHR11432:SF8 1 323 8.2E-244 T 22-04-2016 YPTB_RS14005 56fc6812360c8a20be42c9fe714225e0 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.932 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.354 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 PANTHER PTHR11693 1 287 1.4E-138 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 202 235 6.4E-40 T 22-04-2016 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 19 60 6.4E-40 T 22-04-2016 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 236 282 3.7E-30 T 22-04-2016 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.4E-111 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 Pfam PF00231 ATP synthase 5 286 2.4E-90 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 SUPERFAMILY SSF52943 2 287 2.62E-96 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain YPTB_RS21415 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:3.40.1380.10 63 191 5.2E-43 T 22-04-2016 YPTB_RS01045 be13e550281057eebb281cb1ac8ed073 293 PANTHER PTHR22572 2 268 1.3E-169 T 22-04-2016 YPTB_RS01045 be13e550281057eebb281cb1ac8ed073 293 Pfam PF00483 Nucleotidyl transferase 2 238 7.5E-71 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPTB_RS01045 be13e550281057eebb281cb1ac8ed073 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.1E-159 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPTB_RS01045 be13e550281057eebb281cb1ac8ed073 293 SUPERFAMILY SSF53448 1 286 2.93E-92 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS01045 be13e550281057eebb281cb1ac8ed073 293 Gene3D G3DSA:3.90.550.10 1 263 2.1E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS01045 be13e550281057eebb281cb1ac8ed073 293 PANTHER PTHR22572:SF105 2 268 1.3E-169 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPTB_RS04945 043eaf2f0ecbf755feb087b9261c125a 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 9.4E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS04945 043eaf2f0ecbf755feb087b9261c125a 209 PANTHER PTHR30586 2 209 4.7E-147 T 22-04-2016 YPTB_RS04945 043eaf2f0ecbf755feb087b9261c125a 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.87 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YPTB_RS04945 043eaf2f0ecbf755feb087b9261c125a 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 1.2E-104 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YPTB_RS04945 043eaf2f0ecbf755feb087b9261c125a 209 PIRSF PIRSF006102 3 209 1.5E-70 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS04945 043eaf2f0ecbf755feb087b9261c125a 209 PANTHER PTHR30586:SF1 2 209 4.7E-147 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 PANTHER PTHR10909 29 463 1.6E-240 T 22-04-2016 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 SUPERFAMILY SSF47203 287 447 6.77E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 Gene3D G3DSA:1.20.140.10 281 448 8.6E-40 T 22-04-2016 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 SUPERFAMILY SSF56645 61 287 3.95E-29 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 442 5.1E-29 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 PANTHER PTHR10909:SF289 29 463 1.6E-240 T 22-04-2016 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 Gene3D G3DSA:2.40.110.10 181 280 3.3E-19 T 22-04-2016 YPTB_RS02505 45bdffd384d4d85703eeea6904bf809e 543 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 279 1.1E-12 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 YPTB_RS10125 3b168622e09b07cc99036f229e8d6c9e 171 Pfam PF04985 Phage tail tube protein FII 4 170 2.7E-64 T 22-04-2016 IPR006498 Tail tube protein YPTB_RS10125 3b168622e09b07cc99036f229e8d6c9e 171 PANTHER PTHR35861:SF2 1 171 1.5E-62 T 22-04-2016 YPTB_RS10125 3b168622e09b07cc99036f229e8d6c9e 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 6.0E-54 T 22-04-2016 IPR006498 Tail tube protein YPTB_RS10125 3b168622e09b07cc99036f229e8d6c9e 171 PANTHER PTHR35861 1 171 1.5E-62 T 22-04-2016 YPTB_RS04430 6963c57fc124cb7092a46ffbdd6d689f 293 PANTHER PTHR12110:SF17 1 293 2.5E-120 T 22-04-2016 YPTB_RS04430 6963c57fc124cb7092a46ffbdd6d689f 293 PANTHER PTHR12110 1 293 2.5E-120 T 22-04-2016 YPTB_RS04430 6963c57fc124cb7092a46ffbdd6d689f 293 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 1.2E-35 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS04430 6963c57fc124cb7092a46ffbdd6d689f 293 SUPERFAMILY SSF51658 13 277 1.96E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS04430 6963c57fc124cb7092a46ffbdd6d689f 293 Gene3D G3DSA:3.20.20.150 9 277 6.6E-47 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS04430 6963c57fc124cb7092a46ffbdd6d689f 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 283 1.3E-136 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 3.9E-181 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 PANTHER PTHR22773 1 502 4.8E-196 T 22-04-2016 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 Pfam PF00361 Proton-conducting membrane transporter 134 431 3.6E-70 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YPTB_RS13980 32bca5ee6c4b4c72916d0fc6c8bf4df3 510 PANTHER PTHR22773:SF40 1 502 4.8E-196 T 22-04-2016 YPTB_RS19005 8f9f43d89fac8ee1f99084e7f9ea47f5 134 PANTHER PTHR39579 1 134 1.2E-54 T 22-04-2016 YPTB_RS19005 8f9f43d89fac8ee1f99084e7f9ea47f5 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 7.3E-50 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 YPTB_RS19005 8f9f43d89fac8ee1f99084e7f9ea47f5 134 PIRSF PIRSF006318 1 134 8.3E-52 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 SUPERFAMILY SSF55021 3 75 1.04E-21 T 22-04-2016 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 SUPERFAMILY SSF55021 80 163 5.8E-25 T 22-04-2016 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 Gene3D G3DSA:3.30.70.260 1 77 8.6E-36 T 22-04-2016 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 6.4E-66 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 Gene3D G3DSA:3.30.70.1150 84 163 7.3E-27 T 22-04-2016 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 PANTHER PTHR30239 1 163 2.4E-94 T 22-04-2016 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 Pfam PF01842 ACT domain 5 69 6.9E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.1E-23 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPTB_RS03790 1f96196d9ba77489c0050e51c6b150e1 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 7.0E-37 T 22-04-2016 YPTB_RS19255 a93c0c6c137b39814da7859e6dbe1148 1300 Pfam PF13502 AsmA-like C-terminal region 1044 1286 2.4E-62 T 22-04-2016 IPR032712 AsmA-like, C-terminal YPTB_RS19255 a93c0c6c137b39814da7859e6dbe1148 1300 PANTHER PTHR38690 1 1300 0.0 T 22-04-2016 YPTB_RS19255 a93c0c6c137b39814da7859e6dbe1148 1300 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1297 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 YPTB_RS19255 a93c0c6c137b39814da7859e6dbe1148 1300 Pfam PF13116 Protein of unknown function 504 788 1.9E-98 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 YPTB_RS13310 6be613777a2c2558c790c84c287d8c3e 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 50.987 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 YPTB_RS13310 6be613777a2c2558c790c84c287d8c3e 180 PANTHER PTHR35602:SF2 1 180 4.0E-143 T 22-04-2016 YPTB_RS13310 6be613777a2c2558c790c84c287d8c3e 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.6E-71 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPTB_RS13310 6be613777a2c2558c790c84c287d8c3e 180 SUPERFAMILY SSF53474 1 176 4.39E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS13310 6be613777a2c2558c790c84c287d8c3e 180 PANTHER PTHR35602 1 180 4.0E-143 T 22-04-2016 YPTB_RS12680 eac49ddf601f6bb057eef2148b2f5434 554 PANTHER PTHR33908:SF3 9 544 2.5E-177 T 22-04-2016 YPTB_RS12680 eac49ddf601f6bb057eef2148b2f5434 554 PANTHER PTHR33908 9 544 2.5E-177 T 22-04-2016 YPTB_RS12680 eac49ddf601f6bb057eef2148b2f5434 554 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 239 3.8E-38 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 YPTB_RS12680 eac49ddf601f6bb057eef2148b2f5434 554 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 3 553 43.835 T 22-04-2016 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 UniPathway: UPA00037 YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 PANTHER PTHR30290:SF19 22 81 0.0 T 22-04-2016 YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 PANTHER PTHR30290:SF19 120 565 0.0 T 22-04-2016 YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 PANTHER PTHR30290 22 81 0.0 T 22-04-2016 YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 PANTHER PTHR30290 120 565 0.0 T 22-04-2016 YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 348 8.8E-17 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 Gene3D G3DSA:3.90.76.10 131 274 2.8E-20 T 22-04-2016 YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 3.3E-39 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPTB_RS05355 7c19dccd14ab2c16d96fe022bbe062d2 567 SUPERFAMILY SSF53850 122 562 7.24E-51 T 22-04-2016 YPTB_RS18660 fd2b9476c2945b483ad1a2e644eb88e6 761 SUPERFAMILY SSF103515 454 761 6.8E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS18660 fd2b9476c2945b483ad1a2e644eb88e6 761 Gene3D G3DSA:2.40.128.130 461 761 2.4E-20 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS18660 fd2b9476c2945b483ad1a2e644eb88e6 761 Pfam PF03797 Autotransporter beta-domain 482 741 1.1E-31 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS18660 fd2b9476c2945b483ad1a2e644eb88e6 761 SMART SM00869 484 751 5.8E-25 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS03580 808a6acd1a87a26b5436001cb1d24e59 206 Pfam PF00849 RNA pseudouridylate synthase 9 156 1.5E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS03580 808a6acd1a87a26b5436001cb1d24e59 206 PANTHER PTHR11079 3 205 3.1E-77 T 22-04-2016 YPTB_RS03580 808a6acd1a87a26b5436001cb1d24e59 206 SUPERFAMILY SSF55120 3 203 6.08E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS03580 808a6acd1a87a26b5436001cb1d24e59 206 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS03580 808a6acd1a87a26b5436001cb1d24e59 206 PANTHER PTHR11079:SF86 3 205 3.1E-77 T 22-04-2016 YPTB_RS11090 96934f7f93e48777ddc83537f61b4092 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 180 1.2E-58 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 YPTB_RS03385 66844b7c179158fcbce27dfc838788dd 155 PIRSF PIRSF003174 1 155 2.1E-66 T 22-04-2016 IPR010292 Uncharacterised protein family CreA YPTB_RS03385 66844b7c179158fcbce27dfc838788dd 155 Pfam PF05981 CreA protein 24 155 2.0E-57 T 22-04-2016 IPR010292 Uncharacterised protein family CreA YPTB_RS03385 66844b7c179158fcbce27dfc838788dd 155 PANTHER PTHR37952:SF2 1 155 2.1E-89 T 22-04-2016 YPTB_RS03385 66844b7c179158fcbce27dfc838788dd 155 PANTHER PTHR37952 1 155 2.1E-89 T 22-04-2016 YPTB_RS12035 5fd6609e5efd474cfe13aed56169c7da 347 PANTHER PTHR32196:SF21 15 347 1.2E-97 T 22-04-2016 YPTB_RS12035 5fd6609e5efd474cfe13aed56169c7da 347 PANTHER PTHR32196 15 347 1.2E-97 T 22-04-2016 YPTB_RS12035 5fd6609e5efd474cfe13aed56169c7da 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 335 1.8E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 SUPERFAMILY SSF56300 27 361 2.95E-84 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PANTHER PTHR11575 1 653 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PRINTS PR01607 Apyrase family signature 436 459 2.0E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PRINTS PR01607 Apyrase family signature 223 240 2.0E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PRINTS PR01607 Apyrase family signature 291 311 2.0E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PRINTS PR01607 Apyrase family signature 538 557 2.0E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PRINTS PR01607 Apyrase family signature 30 48 2.0E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PRINTS PR01607 Apyrase family signature 251 274 2.0E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 558 9.6E-24 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 Gene3D G3DSA:3.90.780.10 368 603 1.4E-44 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 ProSitePatterns PS00785 5'-nucleotidase signature 1. 32 44 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 PANTHER PTHR11575:SF6 1 653 0.0 T 22-04-2016 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 SUPERFAMILY SSF55816 363 604 9.68E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 Pfam PF00149 Calcineurin-like phosphoesterase 32 267 1.2E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 30 655 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 Gene3D G3DSA:3.60.21.10 20 367 1.6E-93 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS02565 3bcd31857957dbeb73c5a540129ef5dc 656 ProSitePatterns PS00786 5'-nucleotidase signature 2. 117 128 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YPTB_RS00855 15948b59c8ba234314dfe25d703713ed 154 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 152 7.6E-65 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 Gene3D G3DSA:3.40.50.300 141 285 3.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 Gene3D G3DSA:3.40.50.300 11 102 3.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 Gene3D G3DSA:3.40.50.300 322 532 6.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 SUPERFAMILY SSF52540 11 243 3.47E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.2E-294 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 PANTHER PTHR19211:SF7 3 555 0.0 T 22-04-2016 YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 SUPERFAMILY SSF52540 303 525 1.75E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 SMART SM00382 31 236 2.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 SMART SM00382 348 522 2.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 Pfam PF00005 ABC transporter 22 191 1.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 Pfam PF00005 ABC transporter 340 473 1.0E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 Pfam PF12848 ABC transporter 230 306 3.0E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain YPTB_RS03335 bde896b0d42dd81043991c024689481b 555 PANTHER PTHR19211 3 555 0.0 T 22-04-2016 YPTB_RS20730 36386217cef3b2c085f2ae8fe3df33c5 234 PANTHER PTHR38105:SF1 1 234 6.0E-136 T 22-04-2016 YPTB_RS20730 36386217cef3b2c085f2ae8fe3df33c5 234 SUPERFAMILY SSF56935 53 234 3.66E-10 T 22-04-2016 YPTB_RS20730 36386217cef3b2c085f2ae8fe3df33c5 234 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 234 7.9E-79 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin YPTB_RS20730 36386217cef3b2c085f2ae8fe3df33c5 234 Gene3D G3DSA:2.40.230.30 22 234 5.7E-69 T 22-04-2016 YPTB_RS20730 36386217cef3b2c085f2ae8fe3df33c5 234 PANTHER PTHR38105 1 234 6.0E-136 T 22-04-2016 YPTB_RS18385 dcec6bc38fbce981efb07eb41ff4ee4d 227 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 227 48.582 T 22-04-2016 IPR009576 Biofilm formation YgiB YPTB_RS18385 dcec6bc38fbce981efb07eb41ff4ee4d 227 Pfam PF06693 Protein of unknown function (DUF1190) 41 211 3.4E-55 T 22-04-2016 IPR009576 Biofilm formation YgiB YPTB_RS08320 d1f232171211037662c234547932dd79 436 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 328 418 1.9E-10 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPTB_RS08320 d1f232171211037662c234547932dd79 436 PANTHER PTHR11228 45 428 1.2E-115 T 22-04-2016 YPTB_RS08320 d1f232171211037662c234547932dd79 436 SUPERFAMILY SSF102114 74 400 1.03E-34 T 22-04-2016 YPTB_RS08320 d1f232171211037662c234547932dd79 436 PANTHER PTHR11228:SF7 45 428 1.2E-115 T 22-04-2016 YPTB_RS08320 d1f232171211037662c234547932dd79 436 Gene3D G3DSA:3.20.20.70 75 404 4.1E-37 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS08320 d1f232171211037662c234547932dd79 436 Pfam PF04055 Radical SAM superfamily 80 245 2.3E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS13510 1bdcb837152ffa6dda53e60c21580649 352 PANTHER PTHR21716:SF18 1 350 5.0E-245 T 22-04-2016 YPTB_RS13510 1bdcb837152ffa6dda53e60c21580649 352 PANTHER PTHR21716 1 350 5.0E-245 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPTB_RS13510 1bdcb837152ffa6dda53e60c21580649 352 Pfam PF01594 Domain of unknown function DUF20 14 327 4.6E-71 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPTB_RS21350 81ef87058f13a1bc5caaefe7ec54bbb7 251 SUPERFAMILY SSF161098 22 209 2.22E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21350 81ef87058f13a1bc5caaefe7ec54bbb7 251 PANTHER PTHR30614 1 229 5.2E-160 T 22-04-2016 YPTB_RS21350 81ef87058f13a1bc5caaefe7ec54bbb7 251 Gene3D G3DSA:1.10.3720.10 25 225 2.5E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS21350 81ef87058f13a1bc5caaefe7ec54bbb7 251 PANTHER PTHR30614:SF5 1 229 5.2E-160 T 22-04-2016 YPTB_RS21350 81ef87058f13a1bc5caaefe7ec54bbb7 251 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 1.4E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS21350 81ef87058f13a1bc5caaefe7ec54bbb7 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 8.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20120 24a971eaa5c8051a4efb17decbda0859 282 Gene3D G3DSA:3.60.130.10 4 282 2.1E-95 T 22-04-2016 YPTB_RS20120 24a971eaa5c8051a4efb17decbda0859 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 8.4E-65 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 YPTB_RS20120 24a971eaa5c8051a4efb17decbda0859 282 PANTHER PTHR30468:SF2 1 282 8.8E-102 T 22-04-2016 YPTB_RS20120 24a971eaa5c8051a4efb17decbda0859 282 PANTHER PTHR30468 1 282 8.8E-102 T 22-04-2016 YPTB_RS20120 24a971eaa5c8051a4efb17decbda0859 282 SUPERFAMILY SSF51197 7 281 4.03E-94 T 22-04-2016 YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 PANTHER PTHR36153 1 1164 0.0 T 22-04-2016 YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 7 1162 0.0 T 22-04-2016 IPR017731 Type VI secretion system, IcmF YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 Gene3D G3DSA:3.40.50.300 106 270 4.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 Pfam PF14331 ImcF-related N-terminal domain 197 377 6.1E-29 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 PANTHER PTHR36153:SF4 1 1164 0.0 T 22-04-2016 YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 Pfam PF06761 Intracellular multiplication and human macrophage-killing 513 792 6.5E-61 T 22-04-2016 IPR009612 ImcF-related YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 Pfam PF06744 Type VI secretion protein IcmF C-terminal 916 1110 4.0E-54 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPTB_RS03670 274c3a001e168e5dc8628bfa2d5ef314 1164 SUPERFAMILY SSF52540 122 274 2.83E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 Pfam PF06733 DEAD_2 199 263 2.5E-7 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 SMART SM00487 23 307 0.0016 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 SMART SM00491 545 677 2.9E-32 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 PANTHER PTHR11472:SF32 1 726 0.0 T 22-04-2016 YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 Gene3D G3DSA:3.40.50.300 518 671 2.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 SMART SM00488 18 294 0.0035 T 22-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 SUPERFAMILY SSF52540 211 265 6.14E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 SUPERFAMILY SSF52540 15 120 6.14E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 SUPERFAMILY SSF52540 636 672 6.14E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 Pfam PF00270 DEAD/DEAH box helicase 31 94 2.5E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 Gene3D G3DSA:3.40.50.300 28 122 9.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 Gene3D G3DSA:3.40.50.300 211 277 9.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 Gene3D G3DSA:3.40.50.300 454 464 9.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 PANTHER PTHR11472 1 726 0.0 T 22-04-2016 YPTB_RS06885 0a2405c5166ed03fb14226fde1073b4c 726 Pfam PF13307 Helicase C-terminal domain 534 688 1.4E-23 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPTB_RS13595 87c3f0a9375c7613453abed553b25289 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPTB_RS13595 87c3f0a9375c7613453abed553b25289 452 Pfam PF00083 Sugar (and other) transporter 58 435 8.2E-56 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 YPTB_RS13595 87c3f0a9375c7613453abed553b25289 452 PANTHER PTHR23511 1 435 0.0 T 22-04-2016 YPTB_RS13595 87c3f0a9375c7613453abed553b25289 452 PANTHER PTHR23511:SF10 1 435 0.0 T 22-04-2016 YPTB_RS13595 87c3f0a9375c7613453abed553b25289 452 Gene3D G3DSA:1.20.1250.20 25 204 9.1E-24 T 22-04-2016 YPTB_RS13595 87c3f0a9375c7613453abed553b25289 452 Gene3D G3DSA:1.20.1250.20 250 430 1.8E-12 T 22-04-2016 YPTB_RS13595 87c3f0a9375c7613453abed553b25289 452 SUPERFAMILY SSF103473 12 433 2.62E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465 207 349 7.0E-252 T 22-04-2016 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465 2 183 7.0E-252 T 22-04-2016 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 Gene3D G3DSA:1.10.3720.10 216 346 7.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 Gene3D G3DSA:1.10.3720.10 102 177 7.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 4.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 SUPERFAMILY SSF161098 106 174 1.02E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 SUPERFAMILY SSF161098 213 337 1.02E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465:SF77 207 349 7.0E-252 T 22-04-2016 YPTB_RS02975 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465:SF77 2 183 7.0E-252 T 22-04-2016 YPTB_RS13930 5a819cb1cd172521f3dbc9066eb9bbe8 438 Gene3D G3DSA:1.20.1250.20 11 203 4.0E-44 T 22-04-2016 YPTB_RS13930 5a819cb1cd172521f3dbc9066eb9bbe8 438 PANTHER PTHR11662 1 437 1.1E-226 T 22-04-2016 YPTB_RS13930 5a819cb1cd172521f3dbc9066eb9bbe8 438 PANTHER PTHR11662:SF283 1 437 1.1E-226 T 22-04-2016 YPTB_RS13930 5a819cb1cd172521f3dbc9066eb9bbe8 438 SUPERFAMILY SSF103473 4 415 1.2E-84 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS13930 5a819cb1cd172521f3dbc9066eb9bbe8 438 Gene3D G3DSA:1.20.1250.20 227 413 3.6E-23 T 22-04-2016 YPTB_RS13930 5a819cb1cd172521f3dbc9066eb9bbe8 438 Pfam PF07690 Major Facilitator Superfamily 17 379 8.5E-55 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 Gene3D G3DSA:2.30.110.10 21 217 1.2E-82 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 9.6E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 PANTHER PTHR10851 1 217 3.4E-116 T 22-04-2016 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 PIRSF PIRSF000190 1 217 3.2E-82 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.3 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 SUPERFAMILY SSF50475 20 217 4.86E-67 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 1.2E-22 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 217 2.8E-95 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS12445 d77a9a01a0983fe1d9a37a8de75087d0 217 PANTHER PTHR10851:SF0 1 217 3.4E-116 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 SMART SM00342 192 275 9.8E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Pfam PF02311 AraC-like ligand binding domain 23 141 1.5E-15 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 SUPERFAMILY SSF46689 228 280 5.82E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 PANTHER PTHR11019 1 283 2.3E-188 T 22-04-2016 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 6.7E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 6.7E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Gene3D G3DSA:2.60.120.280 26 161 4.7E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Pfam PF12833 Helix-turn-helix domain 206 277 1.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 SUPERFAMILY SSF51182 16 91 3.2E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Gene3D G3DSA:1.10.10.60 176 228 4.0E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Gene3D G3DSA:1.10.10.60 229 278 1.3E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 54.282 T 22-04-2016 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 YPTB_RS02245 fbc1eccb924f1c8c2b77c49d4d3fab29 290 PANTHER PTHR11019:SF107 1 283 2.3E-188 T 22-04-2016 YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 1.6E-135 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SUPERFAMILY SSF50998 24 385 5.83E-78 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 Gene3D G3DSA:2.140.10.10 1 392 1.2E-77 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.914 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 PANTHER PTHR32303:SF8 1 384 2.1E-181 T 22-04-2016 YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 252 283 7.7E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 330 362 2.3 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 65 96 0.13 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 290 321 770.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 115 147 0.02 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 201 232 24.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 156 187 2.8E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 Pfam PF13360 PQQ-like domain 78 320 6.1E-53 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat YPTB_RS15360 9c3573b92e47bbe9456af71479a78d71 393 PANTHER PTHR32303 1 384 2.1E-181 T 22-04-2016 YPTB_RS09815 bcfc401810d13fbc3c5bcdc72b9eed96 280 Pfam PF03837 RecT family 20 200 3.1E-26 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 YPTB_RS09815 bcfc401810d13fbc3c5bcdc72b9eed96 280 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 25 198 2.2E-36 T 22-04-2016 IPR010183 Bacteriophage lambda, Bet YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:1.10.8.60 379 448 9.8E-21 T 22-04-2016 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 SUPERFAMILY SSF52540 206 447 1.52E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:3.30.450.20 76 180 4.4E-12 T 22-04-2016 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:3.40.50.300 202 378 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 SMART SM00091 80 146 7.9E-6 T 22-04-2016 IPR000014 PAS domain YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 SMART SM00382 226 370 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 PANTHER PTHR32071:SF3 5 523 1.3E-233 T 22-04-2016 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 Pfam PF00158 Sigma-54 interaction domain 206 372 1.1E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:1.10.10.60 458 513 3.8E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 PANTHER PTHR32071 5 523 1.3E-233 T 22-04-2016 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 SUPERFAMILY SSF55785 81 170 4.76E-8 T 22-04-2016 IPR000014 PAS domain YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 Pfam PF00989 PAS fold 82 124 4.5E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 8.0E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 YPTB_RS12330 eb16ebfe5e73d908ee108ce0c96a41d4 525 SUPERFAMILY SSF46689 459 513 1.43E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.074 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 SUPERFAMILY SSF52972 1 186 4.71E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 2.3E-54 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 Gene3D G3DSA:3.90.950.10 2 189 5.6E-53 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 PANTHER PTHR11746 120 190 4.0E-35 T 22-04-2016 YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 PANTHER PTHR11746:SF102 120 190 4.0E-35 T 22-04-2016 YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 Pfam PF02545 Maf-like protein 3 185 1.3E-41 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS13460 3d5406cfafd0a67130f971b32383c281 198 PIRSF PIRSF006305 1 193 4.1E-37 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 SUPERFAMILY SSF53850 1 242 1.49E-73 T 22-04-2016 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 PANTHER PTHR18966 20 241 3.3E-110 T 22-04-2016 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 Gene3D G3DSA:3.40.190.10 109 201 1.4E-29 T 22-04-2016 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 8.9E-87 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 Gene3D G3DSA:3.40.190.10 203 242 8.0E-44 T 22-04-2016 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 Gene3D G3DSA:3.40.190.10 20 108 8.0E-44 T 22-04-2016 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 SMART SM00062 22 242 2.5E-84 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 SMART SM00079 22 243 5.1E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 PANTHER PTHR18966:SF194 20 241 3.3E-110 T 22-04-2016 YPTB_RS07555 211ae7f6f70bbc530586f84bba3dd9c7 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 4.4E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB_RS13625 3f8ea2f895c0de541ad4ac3b6fcdfa56 448 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 58 436 1.3E-159 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 YPTB_RS13625 3f8ea2f895c0de541ad4ac3b6fcdfa56 448 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 59 429 1.2E-135 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 YPTB_RS01290 89ac6633759986a9c5b769701740ec8e 208 Pfam PF07947 YhhN-like protein 26 206 4.9E-44 T 22-04-2016 IPR012506 YhhN-like GO:0016021 YPTB_RS19665 0c8564e0c1083e701cf3c77db7618e79 493 PANTHER PTHR35565 1 493 0.0 T 22-04-2016 YPTB_RS19665 0c8564e0c1083e701cf3c77db7618e79 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 491 2.2E-175 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS19665 0c8564e0c1083e701cf3c77db7618e79 493 PANTHER PTHR35565:SF1 1 493 0.0 T 22-04-2016 YPTB_RS19665 0c8564e0c1083e701cf3c77db7618e79 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 491 3.7E-210 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 Gene3D G3DSA:2.40.40.10 78 163 1.1E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 Gene3D G3DSA:2.40.40.10 168 356 8.6E-48 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 SMART SM00925 125 259 7.8E-75 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 Pfam PF03562 MltA specific insert domain 103 259 2.9E-42 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 PANTHER PTHR30124:SF0 1 388 6.4E-165 T 22-04-2016 YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 PANTHER PTHR30124 1 388 6.4E-165 T 22-04-2016 YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 SUPERFAMILY SSF50685 25 355 7.32E-111 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 Pfam PF06725 3D domain 279 356 4.7E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 YPTB_RS16350 ff52386c64c21d019550d29ead4a2d38 390 PIRSF PIRSF019422 1 367 8.6E-88 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A YPTB_RS08330 0ea71cb32f56523b0e2e190d1bc0d3a2 420 Gene3D G3DSA:2.40.50.100 228 264 3.2E-6 T 22-04-2016 YPTB_RS08330 0ea71cb32f56523b0e2e190d1bc0d3a2 420 Gene3D G3DSA:2.40.50.100 72 106 3.2E-6 T 22-04-2016 YPTB_RS08330 0ea71cb32f56523b0e2e190d1bc0d3a2 420 PANTHER PTHR30469 3 115 1.7E-122 T 22-04-2016 YPTB_RS08330 0ea71cb32f56523b0e2e190d1bc0d3a2 420 PANTHER PTHR30469 141 404 1.7E-122 T 22-04-2016 YPTB_RS08330 0ea71cb32f56523b0e2e190d1bc0d3a2 420 PANTHER PTHR30469:SF15 3 115 1.7E-122 T 22-04-2016 YPTB_RS08330 0ea71cb32f56523b0e2e190d1bc0d3a2 420 PANTHER PTHR30469:SF15 141 404 1.7E-122 T 22-04-2016 YPTB_RS08330 0ea71cb32f56523b0e2e190d1bc0d3a2 420 Pfam PF13437 HlyD family secretion protein 235 320 3.0E-6 T 22-04-2016 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 Gene3D G3DSA:3.40.50.300 197 361 3.6E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 SUPERFAMILY SSF52540 197 375 1.69E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.6E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 SUPERFAMILY SSF54980 366 422 5.83E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.4 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.7E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.7E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.7E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.8E-151 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.0E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 PIRSF PIRSF006809 3 422 8.4E-147 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 PANTHER PTHR10229 1 428 1.2E-181 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 PANTHER PTHR10229:SF0 1 428 1.2E-181 T 22-04-2016 YPTB_RS02465 65b49c3b2ade39042c587ef213491509 428 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.3E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain YPTB_RS01295 b3d46fdd4345f7111df1a882dc327792 106 PIRSF PIRSF028538 1 106 7.7E-44 T 22-04-2016 IPR014949 Protein of unknown function DUF1820 YPTB_RS01295 b3d46fdd4345f7111df1a882dc327792 106 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 1.6E-40 T 22-04-2016 IPR014949 Protein of unknown function DUF1820 YPTB_RS09160 d10e148b86965c4c69cd2422054acef7 108 Gene3D G3DSA:1.10.1200.10 3 60 2.4E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS09160 d10e148b86965c4c69cd2422054acef7 108 Pfam PF07377 Protein of unknown function (DUF1493) 1 108 9.2E-44 T 22-04-2016 IPR010862 Protein of unknown function DUF1493 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244 198 369 2.4E-41 T 22-04-2016 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244 34 164 2.4E-41 T 22-04-2016 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 17 392 46.604 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 SUPERFAMILY SSF117281 55 168 4.84E-30 T 22-04-2016 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 SUPERFAMILY SSF117281 203 381 4.84E-30 T 22-04-2016 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 Gene3D G3DSA:2.120.10.80 210 382 1.5E-27 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 Gene3D G3DSA:2.120.10.80 55 178 1.5E-27 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244:SF303 198 369 2.4E-41 T 22-04-2016 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244:SF303 34 164 2.4E-41 T 22-04-2016 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 Pfam PF01344 Kelch motif 91 140 1.5E-9 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 YPTB_RS09505 61ae347a80600f80494e91c7776f6469 392 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 38 385 1.6E-153 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like YPTB_RS01205 1eecf44797e6cab923e34896d13623f5 156 PANTHER PTHR12418:SF35 9 155 1.9E-83 T 22-04-2016 YPTB_RS01205 1eecf44797e6cab923e34896d13623f5 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 154 2.8E-15 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain YPTB_RS01205 1eecf44797e6cab923e34896d13623f5 156 SUPERFAMILY SSF54637 13 155 1.0E-24 T 22-04-2016 IPR029069 HotDog domain YPTB_RS01205 1eecf44797e6cab923e34896d13623f5 156 PANTHER PTHR12418 9 155 1.9E-83 T 22-04-2016 YPTB_RS01205 1eecf44797e6cab923e34896d13623f5 156 Gene3D G3DSA:3.10.129.10 16 155 2.5E-30 T 22-04-2016 IPR029069 HotDog domain YPTB_RS01205 1eecf44797e6cab923e34896d13623f5 156 Pfam PF03061 Thioesterase superfamily 58 143 6.5E-16 T 22-04-2016 IPR006683 Thioesterase domain YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 PANTHER PTHR30191:SF7 9 760 0.0 T 22-04-2016 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 Gene3D G3DSA:3.20.70.20 5 759 0.0 T 22-04-2016 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 Pfam PF02901 Pyruvate formate lyase-like 24 614 1.1E-205 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 PANTHER PTHR30191 9 760 0.0 T 22-04-2016 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 PIRSF PIRSF000379 8 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 SUPERFAMILY SSF51998 4 758 2.35E-289 T 22-04-2016 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 Pfam PF01228 Glycine radical 630 741 3.4E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YPTB_RS07775 480d15168e7aaadd8a146dbfcb608a34 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 PANTHER PTHR34875 1 189 1.2E-88 T 22-04-2016 YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 Gene3D G3DSA:3.30.70.260 6 84 3.4E-32 T 22-04-2016 YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 PANTHER PTHR34875:SF3 1 189 1.2E-88 T 22-04-2016 YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 Gene3D G3DSA:3.30.70.260 91 188 2.7E-43 T 22-04-2016 YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 SUPERFAMILY SSF55021 91 179 4.0E-19 T 22-04-2016 YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 SUPERFAMILY SSF55021 7 85 1.54E-16 T 22-04-2016 YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 PIRSF PIRSF028103 5 180 3.8E-64 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 YPTB_RS15080 861b7381a280e8bff0b4159f91d57fb0 189 Pfam PF13740 ACT domain 7 82 1.1E-26 T 22-04-2016 YPTB_RS11145 4e9e8c0b0a49ec7ff32afa38b940fbdf 323 SUPERFAMILY SSF53335 91 323 4.89E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS11145 4e9e8c0b0a49ec7ff32afa38b940fbdf 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 8.2E-146 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 YPTB_RS11145 4e9e8c0b0a49ec7ff32afa38b940fbdf 323 PANTHER PTHR10108 71 322 9.9E-140 T 22-04-2016 YPTB_RS11145 4e9e8c0b0a49ec7ff32afa38b940fbdf 323 PANTHER PTHR10108:SF847 71 322 9.9E-140 T 22-04-2016 YPTB_RS11145 4e9e8c0b0a49ec7ff32afa38b940fbdf 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 322 54.202 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 YPTB_RS11145 4e9e8c0b0a49ec7ff32afa38b940fbdf 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 2.0E-164 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like YPTB_RS11145 4e9e8c0b0a49ec7ff32afa38b940fbdf 323 Gene3D G3DSA:3.40.50.150 91 316 3.8E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 PANTHER PTHR30465:SF0 194 337 7.4E-154 T 22-04-2016 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 PANTHER PTHR30465:SF0 1 169 7.4E-154 T 22-04-2016 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 Gene3D G3DSA:1.10.3720.10 87 162 1.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 Gene3D G3DSA:1.10.3720.10 203 332 1.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 SUPERFAMILY SSF161098 89 160 7.52E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 SUPERFAMILY SSF161098 200 322 7.52E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 1.3E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 PANTHER PTHR30465 194 337 7.4E-154 T 22-04-2016 YPTB_RS20760 d399ccc3315be852171df666a1f5b2ee 339 PANTHER PTHR30465 1 169 7.4E-154 T 22-04-2016 YPTB_RS02805 fc2c6335e0ef42dee41c3077c515d52c 386 Gene3D G3DSA:2.40.50.100 165 198 3.3E-26 T 22-04-2016 YPTB_RS02805 fc2c6335e0ef42dee41c3077c515d52c 386 Gene3D G3DSA:2.40.50.100 58 90 3.3E-26 T 22-04-2016 YPTB_RS02805 fc2c6335e0ef42dee41c3077c515d52c 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 365 2.0E-81 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS02805 fc2c6335e0ef42dee41c3077c515d52c 386 SUPERFAMILY SSF111369 44 290 5.36E-79 T 22-04-2016 YPTB_RS02805 fc2c6335e0ef42dee41c3077c515d52c 386 PANTHER PTHR30158 5 385 1.9E-146 T 22-04-2016 YPTB_RS02805 fc2c6335e0ef42dee41c3077c515d52c 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 283 3.0E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS02805 fc2c6335e0ef42dee41c3077c515d52c 386 PANTHER PTHR30158:SF3 5 385 1.9E-146 T 22-04-2016 YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 SMART SM00862 34 109 1.3E-8 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 PANTHER PTHR26402:SF531 220 347 1.7E-24 T 22-04-2016 YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 PANTHER PTHR26402:SF531 10 124 1.7E-24 T 22-04-2016 YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 Gene3D G3DSA:1.10.10.10 18 111 7.3E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 SUPERFAMILY SSF46894 15 109 1.62E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 PANTHER PTHR26402 220 347 1.7E-24 T 22-04-2016 YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 PANTHER PTHR26402 10 124 1.7E-24 T 22-04-2016 YPTB_RS17995 25c7944c3da005b595f514518a861c7b 348 Pfam PF00486 Transcriptional regulatory protein, C terminal 37 109 2.1E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS13345 8b406d5a4a8f2cfff05008c06115d0bb 88 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 4 87 9.3E-22 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 Gene3D G3DSA:3.40.630.30 171 319 7.3E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 PANTHER PTHR11748 329 794 2.3E-173 T 22-04-2016 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 Pfam PF01565 FAD binding domain 389 525 2.5E-29 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 SUPERFAMILY SSF56176 372 555 6.07E-39 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 Gene3D G3DSA:3.30.43.10 386 445 3.6E-9 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 Pfam PF13480 Acetyltransferase (GNAT) domain 187 322 1.0E-10 T 22-04-2016 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 389 422 - T 22-04-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 PANTHER PTHR11748:SF75 329 794 2.3E-173 T 22-04-2016 YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 SUPERFAMILY SSF55729 175 334 3.65E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS08105 aace6e763db5f8c64effdc0c0d645796 805 Gene3D G3DSA:3.30.465.10 446 540 1.4E-9 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPTB_RS18375 ce0209c5fe27ec9c7a9408ce6561b1ad 464 Gene3D G3DSA:1.20.1600.10 11 431 6.9E-90 T 22-04-2016 YPTB_RS18375 ce0209c5fe27ec9c7a9408ce6561b1ad 464 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 440 9.6E-130 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 YPTB_RS18375 ce0209c5fe27ec9c7a9408ce6561b1ad 464 PANTHER PTHR30026:SF3 1 450 7.3E-171 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 YPTB_RS18375 ce0209c5fe27ec9c7a9408ce6561b1ad 464 PANTHER PTHR30026 1 450 7.3E-171 T 22-04-2016 YPTB_RS18375 ce0209c5fe27ec9c7a9408ce6561b1ad 464 SUPERFAMILY SSF56954 25 441 2.35E-93 T 22-04-2016 YPTB_RS18375 ce0209c5fe27ec9c7a9408ce6561b1ad 464 Pfam PF02321 Outer membrane efflux protein 233 424 7.9E-34 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPTB_RS18375 ce0209c5fe27ec9c7a9408ce6561b1ad 464 Pfam PF02321 Outer membrane efflux protein 25 210 1.2E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPTB_RS20010 3476b68d211c1d01328d01318d8bbe2d 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 4.0E-64 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 YPTB_RS20010 3476b68d211c1d01328d01318d8bbe2d 201 Gene3D G3DSA:3.40.1370.10 54 201 3.3E-59 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 YPTB_RS20010 3476b68d211c1d01328d01318d8bbe2d 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 4 201 33.968 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YPTB_RS20010 3476b68d211c1d01328d01318d8bbe2d 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.7E-74 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YPTB_RS20010 3476b68d211c1d01328d01318d8bbe2d 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 YPTB_RS20010 3476b68d211c1d01328d01318d8bbe2d 201 PANTHER PTHR10746 7 200 1.7E-95 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YPTB_RS18935 b118e05bf0ab8cbbd1633aa939a231e9 217 PIRSF PIRSF006320 1 216 1.2E-99 T 22-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 YPTB_RS18935 b118e05bf0ab8cbbd1633aa939a231e9 217 SUPERFAMILY SSF52317 1 215 5.73E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS18935 b118e05bf0ab8cbbd1633aa939a231e9 217 Gene3D G3DSA:3.40.50.880 1 216 1.4E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS18935 b118e05bf0ab8cbbd1633aa939a231e9 217 PANTHER PTHR10224 1 217 3.0E-128 T 22-04-2016 YPTB_RS12050 ad80b3380f940ebefec0e8363220f9cf 343 SUPERFAMILY SSF53850 44 278 2.29E-40 T 22-04-2016 YPTB_RS12050 ad80b3380f940ebefec0e8363220f9cf 343 PANTHER PTHR30024 5 314 3.7E-58 T 22-04-2016 YPTB_RS12050 ad80b3380f940ebefec0e8363220f9cf 343 Gene3D G3DSA:3.40.190.10 121 249 5.0E-24 T 22-04-2016 YPTB_RS12050 ad80b3380f940ebefec0e8363220f9cf 343 PANTHER PTHR30024:SF1 5 314 3.7E-58 T 22-04-2016 YPTB_RS12050 ad80b3380f940ebefec0e8363220f9cf 343 Pfam PF13379 NMT1-like family 56 268 5.5E-20 T 22-04-2016 YPTB_RS12695 0cce5cccc0d7cd5e9c00a089f678a52e 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 61.715 T 22-04-2016 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53|UniPathway: UPA00030|UniPathway: UPA00036 YPTB_RS12695 0cce5cccc0d7cd5e9c00a089f678a52e 327 PANTHER PTHR10859:SF49 4 327 3.5E-163 T 22-04-2016 YPTB_RS12695 0cce5cccc0d7cd5e9c00a089f678a52e 327 PANTHER PTHR10859 4 327 3.5E-163 T 22-04-2016 YPTB_RS12695 0cce5cccc0d7cd5e9c00a089f678a52e 327 Pfam PF00535 Glycosyl transferase family 2 11 172 7.7E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPTB_RS12695 0cce5cccc0d7cd5e9c00a089f678a52e 327 Gene3D G3DSA:3.90.550.10 8 147 5.3E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS12695 0cce5cccc0d7cd5e9c00a089f678a52e 327 SUPERFAMILY SSF53448 8 244 7.03E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 1.7E-292 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 SMART SM01002 146 311 8.5E-86 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 PIRSF PIRSF000203 1 507 9.0E-280 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 SMART SM01003 4 137 5.7E-77 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.0E-75 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 Gene3D G3DSA:3.40.50.720 174 199 2.5E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 425 507 9.7E-36 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.0E-52 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 SUPERFAMILY SSF52283 1 168 1.11E-58 T 22-04-2016 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 PANTHER PTHR10160 1 508 0.0 T 22-04-2016 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 SUPERFAMILY SSF51735 137 317 3.01E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 Gene3D G3DSA:3.40.50.1770 2 173 2.3E-74 T 22-04-2016 YPTB_RS12140 cd650ce5ab2841f1558aaccd88ecd039 508 Gene3D G3DSA:3.40.50.1770 200 371 2.8E-48 T 22-04-2016 YPTB_RS14870 32f5eadcd6e012e031a05449c73e3cd9 299 PANTHER PTHR30521 1 299 2.1E-137 T 22-04-2016 YPTB_RS14870 32f5eadcd6e012e031a05449c73e3cd9 299 PANTHER PTHR30521:SF0 1 299 2.1E-137 T 22-04-2016 YPTB_RS14870 32f5eadcd6e012e031a05449c73e3cd9 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 1.2E-85 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPTB_RS14870 32f5eadcd6e012e031a05449c73e3cd9 299 SUPERFAMILY SSF54909 1 297 3.93E-91 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS14870 32f5eadcd6e012e031a05449c73e3cd9 299 Pfam PF04261 Dyp-type peroxidase family 5 294 1.2E-92 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.817 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50249 67 128 2.61E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.40.50.140 130 187 8.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.5E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.40.50.140 66 129 2.1E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 SMART SM00841 131 186 9.5E-33 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50104 6 64 5.78E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 SMART SM01185 69 123 2.3E-25 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.30.30.30 6 65 9.0E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50249 130 187 1.25E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 62 7.5E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 PIRSF PIRSF005901 2 188 3.1E-66 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.8E-76 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 PANTHER PTHR30053 1 188 4.2E-95 T 22-04-2016 YPTB_RS02345 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 5.1E-26 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPTB_RS20615 1e22881da2d08e14898ceeebc5c3d62e 148 SUPERFAMILY SSF52402 3 139 1.17E-31 T 22-04-2016 YPTB_RS20615 1e22881da2d08e14898ceeebc5c3d62e 148 PIRSF PIRSF006276 1 141 4.8E-54 T 22-04-2016 IPR006015 Universal stress protein A YPTB_RS20615 1e22881da2d08e14898ceeebc5c3d62e 148 Gene3D G3DSA:3.40.50.620 3 139 2.6E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS20615 1e22881da2d08e14898ceeebc5c3d62e 148 Pfam PF00582 Universal stress protein family 3 138 7.6E-21 T 22-04-2016 IPR006016 UspA GO:0006950 YPTB_RS11495 83d970094106887fa2677f24cb28c5fb 338 SMART SM00448 8 120 1.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS11495 83d970094106887fa2677f24cb28c5fb 338 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 56.061 T 22-04-2016 IPR028616 Regulator of RpoS YPTB_RS11495 83d970094106887fa2677f24cb28c5fb 338 Gene3D G3DSA:3.40.50.2300 6 124 2.8E-30 T 22-04-2016 YPTB_RS11495 83d970094106887fa2677f24cb28c5fb 338 SUPERFAMILY SSF52172 7 155 1.85E-32 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS11495 83d970094106887fa2677f24cb28c5fb 338 PANTHER PTHR26402 8 150 9.1E-88 T 22-04-2016 YPTB_RS11495 83d970094106887fa2677f24cb28c5fb 338 Pfam PF00072 Response regulator receiver domain 10 120 4.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS11495 83d970094106887fa2677f24cb28c5fb 338 PANTHER PTHR26402:SF554 8 150 9.1E-88 T 22-04-2016 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 Gene3D G3DSA:3.40.140.10 31 176 2.4E-45 T 22-04-2016 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 PANTHER PTHR11644 18 294 2.5E-169 T 22-04-2016 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 SUPERFAMILY SSF53927 154 290 3.96E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 Gene3D G3DSA:3.40.140.10 185 291 1.3E-24 T 22-04-2016 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 140 4.1E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 5.8E-47 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 285 6.9E-88 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 SUPERFAMILY SSF53927 1 149 8.87E-43 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 PIRSF PIRSF006334 14 294 2.5E-112 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 PANTHER PTHR11644:SF15 18 294 2.5E-169 T 22-04-2016 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 50.879 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPTB_RS08405 b1b6ed6433f0c490223eabe3d9120e96 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YPTB_RS09885 a3e9b892252da93aa3562da45c845fc8 299 Pfam PF04381 Putative exonuclease, RdgC 5 299 1.8E-115 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YPTB_RS09885 a3e9b892252da93aa3562da45c845fc8 299 PANTHER PTHR38103 5 299 2.7E-131 T 22-04-2016 YPTB_RS09885 a3e9b892252da93aa3562da45c845fc8 299 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 3 299 36.411 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YPTB_RS09885 a3e9b892252da93aa3562da45c845fc8 299 PANTHER PTHR38103:SF1 5 299 2.7E-131 T 22-04-2016 YPTB_RS03075 e2b54a51f5784d4bb48a2d948c65dd32 114 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 86 4.1E-25 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 YPTB_RS03075 e2b54a51f5784d4bb48a2d948c65dd32 114 Gene3D G3DSA:3.40.50.2300 3 99 7.9E-33 T 22-04-2016 YPTB_RS03075 e2b54a51f5784d4bb48a2d948c65dd32 114 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 97 3.4E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS03075 e2b54a51f5784d4bb48a2d948c65dd32 114 SUPERFAMILY SSF52794 4 98 1.92E-28 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPTB_RS03075 e2b54a51f5784d4bb48a2d948c65dd32 114 PANTHER PTHR30505 1 114 1.6E-50 T 22-04-2016 YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 PANTHER PTHR11061:SF25 6 367 1.7E-243 T 22-04-2016 YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 PANTHER PTHR11061 6 367 1.7E-243 T 22-04-2016 YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 366 6.1E-191 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 SUPERFAMILY SSF53335 7 365 7.71E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.786 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 1.6E-191 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 Gene3D G3DSA:3.40.50.150 158 364 3.9E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS00740 50bb697db991d84b9ce34b221787cdf9 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site YPTB_RS05765 3256ca64bb06b6c706e56de6736bfb27 210 PANTHER PTHR10434:SF21 1 187 3.5E-57 T 22-04-2016 YPTB_RS05765 3256ca64bb06b6c706e56de6736bfb27 210 SMART SM00563 38 157 6.4E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS05765 3256ca64bb06b6c706e56de6736bfb27 210 PANTHER PTHR10434 1 187 3.5E-57 T 22-04-2016 YPTB_RS05765 3256ca64bb06b6c706e56de6736bfb27 210 Pfam PF01553 Acyltransferase 24 154 4.4E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS05765 3256ca64bb06b6c706e56de6736bfb27 210 Gene3D G3DSA:3.40.1130.10 29 163 4.1E-16 T 22-04-2016 YPTB_RS05765 3256ca64bb06b6c706e56de6736bfb27 210 SUPERFAMILY SSF69593 5 184 8.37E-35 T 22-04-2016 YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 Gene3D G3DSA:3.40.250.10 155 279 1.9E-39 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 SMART SM00450 7 133 1.4E-24 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 SMART SM00450 156 276 5.4E-18 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 ProSitePatterns PS00683 Rhodanese C-terminal signature. 260 270 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 Pfam PF00581 Rhodanese-like domain 8 129 4.3E-17 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 Pfam PF00581 Rhodanese-like domain 158 272 1.4E-11 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 Gene3D G3DSA:3.40.250.10 1 152 2.6E-46 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 PANTHER PTHR11364 1 282 1.0E-119 T 22-04-2016 YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 SUPERFAMILY SSF52821 159 279 6.68E-33 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 SUPERFAMILY SSF52821 1 152 3.4E-41 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS06835 79c428f5bbdc6387e7299ae8beb3d8da 284 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF56425 236 356 6.58E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF46977 452 588 9.29E-45 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 5.8E-276 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.50.50.60 351 425 8.3E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.50.50.60 6 242 8.3E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 Pfam PF00890 FAD binding domain 9 405 3.9E-117 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 PANTHER PTHR11632:SF5 1 573 0.0 T 22-04-2016 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF51905 359 438 1.87E-77 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF51905 5 259 1.87E-77 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:1.20.58.100 433 547 1.3E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.3E-242 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.1E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 PANTHER PTHR11632 1 573 0.0 T 22-04-2016 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.90.700.10 243 349 4.5E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:4.10.80.40 548 588 1.3E-20 T 22-04-2016 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 22-04-2016 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 22-04-2016 YPTB_RS06330 c9d089ca7f028fda207b61052653c369 588 PIRSF PIRSF000171 1 580 1.6E-46 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit YPTB_RS10220 2cc231f4d8cb7292e2ebee8f6526a695 351 Pfam PF05125 Phage major capsid protein, P2 family 8 340 9.0E-142 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YPTB_RS10220 2cc231f4d8cb7292e2ebee8f6526a695 351 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 6 341 4.0E-89 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YPTB_RS15070 5e39c3dfa6289e207a6e60da0b20e6ed 352 Pfam PF06804 NlpB/DapX lipoprotein 40 343 1.6E-111 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein YPTB_RS15070 5e39c3dfa6289e207a6e60da0b20e6ed 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 39.955 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC YPTB_RS15070 5e39c3dfa6289e207a6e60da0b20e6ed 352 PIRSF PIRSF026343 9 346 1.1E-113 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC YPTB_RS17625 f2893adabd0e96c6d89279b320aa8283 87 PANTHER PTHR33293:SF2 1 86 2.4E-16 T 22-04-2016 YPTB_RS17625 f2893adabd0e96c6d89279b320aa8283 87 Pfam PF12759 InsA C-terminal domain 42 86 2.6E-27 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTB_RS17625 f2893adabd0e96c6d89279b320aa8283 87 PANTHER PTHR33293 1 86 2.4E-16 T 22-04-2016 YPTB_RS17625 f2893adabd0e96c6d89279b320aa8283 87 Pfam PF03811 InsA N-terminal domain 1 35 7.0E-15 T 22-04-2016 IPR003220 InsA N-terminal domain GO:0006313 YPTB_RS09230 b72933f93900dd8d5044d8c3fb2d0710 251 SUPERFAMILY SSF117143 77 209 7.72E-19 T 22-04-2016 YPTB_RS09230 b72933f93900dd8d5044d8c3fb2d0710 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 247 6.1E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS09230 b72933f93900dd8d5044d8c3fb2d0710 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 6.9E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS09230 b72933f93900dd8d5044d8c3fb2d0710 251 Pfam PF00460 Flagella basal body rod protein 5 35 4.9E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS09230 b72933f93900dd8d5044d8c3fb2d0710 251 PANTHER PTHR30435 1 251 4.3E-119 T 22-04-2016 YPTB_RS09230 b72933f93900dd8d5044d8c3fb2d0710 251 PANTHER PTHR30435:SF18 1 251 4.3E-119 T 22-04-2016 YPTB_RS07165 de0e85485dcfeaf5dafa94b8c90fa30a 271 PANTHER PTHR34319:SF1 2 221 7.1E-147 T 22-04-2016 YPTB_RS07165 de0e85485dcfeaf5dafa94b8c90fa30a 271 PANTHER PTHR34319 2 221 7.1E-147 T 22-04-2016 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PANTHER PTHR32195 11 410 9.8E-212 T 22-04-2016 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 6.0E-148 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 402 1.0E-144 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YPTB_RS07290 58774cf9ab7f002db0eb4c47bed7e082 414 PANTHER PTHR32195:SF18 11 410 9.8E-212 T 22-04-2016 YPTB_RS03850 92d8af04ecb095805205de0df467b41a 400 PANTHER PTHR30474:SF2 10 400 4.4E-192 T 22-04-2016 YPTB_RS03850 92d8af04ecb095805205de0df467b41a 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 YPTB_RS03850 92d8af04ecb095805205de0df467b41a 400 Pfam PF01098 Cell cycle protein 33 387 3.9E-122 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPTB_RS03850 92d8af04ecb095805205de0df467b41a 400 PANTHER PTHR30474 10 400 4.4E-192 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPTB_RS03850 92d8af04ecb095805205de0df467b41a 400 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 29 396 42.061 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 YPTB_RS03850 92d8af04ecb095805205de0df467b41a 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 1.7E-134 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 6.9E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 PANTHER PTHR26402:SF399 5 228 1.9E-117 T 22-04-2016 YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 Gene3D G3DSA:1.10.10.10 128 227 1.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 SUPERFAMILY SSF52172 3 181 1.11E-38 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 SMART SM00862 150 226 1.2E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 SMART SM00448 5 115 2.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 PANTHER PTHR26402 5 228 1.9E-117 T 22-04-2016 YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 Pfam PF00072 Response regulator receiver domain 7 116 5.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS15785 a24436d6ac268ad05a3440c4e14b9208 228 Gene3D G3DSA:3.40.50.2300 5 127 1.1E-36 T 22-04-2016 YPTB_RS20220 55bf79841751e1713d7945c0e32dfbaa 432 Pfam PF07969 Amidohydrolase family 51 410 1.9E-53 T 22-04-2016 IPR013108 Amidohydrolase 3 YPTB_RS20220 55bf79841751e1713d7945c0e32dfbaa 432 Gene3D G3DSA:3.20.20.140 70 372 4.7E-124 T 22-04-2016 YPTB_RS20220 55bf79841751e1713d7945c0e32dfbaa 432 PANTHER PTHR32027 2 432 1.7E-187 T 22-04-2016 YPTB_RS20220 55bf79841751e1713d7945c0e32dfbaa 432 SUPERFAMILY SSF51338 11 67 1.08E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS20220 55bf79841751e1713d7945c0e32dfbaa 432 Gene3D G3DSA:2.30.40.10 27 69 8.8E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS20220 55bf79841751e1713d7945c0e32dfbaa 432 PANTHER PTHR32027:SF0 2 432 1.7E-187 T 22-04-2016 YPTB_RS20220 55bf79841751e1713d7945c0e32dfbaa 432 SUPERFAMILY SSF51556 62 381 2.82E-106 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS13105 e9c626d75a9d315210be82c69ed61382 116 SUPERFAMILY SSF63592 1 98 4.84E-39 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YPTB_RS13105 e9c626d75a9d315210be82c69ed61382 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 3.0E-45 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YPTB_RS13105 e9c626d75a9d315210be82c69ed61382 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 2.2E-40 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YPTB_RS13105 e9c626d75a9d315210be82c69ed61382 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.706 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YPTB_RS18325 6b490230598c4367a32ae1c3cfcef3b8 243 SUPERFAMILY SSF69593 2 237 4.45E-64 T 22-04-2016 YPTB_RS18325 6b490230598c4367a32ae1c3cfcef3b8 243 SMART SM00563 67 182 1.8E-39 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS18325 6b490230598c4367a32ae1c3cfcef3b8 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 5.7E-48 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 YPTB_RS18325 6b490230598c4367a32ae1c3cfcef3b8 243 Gene3D G3DSA:3.40.1130.10 45 233 4.8E-19 T 22-04-2016 YPTB_RS18325 6b490230598c4367a32ae1c3cfcef3b8 243 Pfam PF01553 Acyltransferase 62 180 3.3E-32 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPTB_RS18325 6b490230598c4367a32ae1c3cfcef3b8 243 PANTHER PTHR10434:SF20 1 243 5.8E-172 T 22-04-2016 YPTB_RS18325 6b490230598c4367a32ae1c3cfcef3b8 243 PANTHER PTHR10434 1 243 5.8E-172 T 22-04-2016 YPTB_RS07330 4e42999b4f673c4cdb3cf44512014b22 362 Pfam PF13407 Periplasmic binding protein domain 41 303 8.0E-46 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS07330 4e42999b4f673c4cdb3cf44512014b22 362 PANTHER PTHR32196:SF41 25 350 6.7E-216 T 22-04-2016 YPTB_RS07330 4e42999b4f673c4cdb3cf44512014b22 362 Gene3D G3DSA:3.40.50.2300 33 147 1.3E-20 T 22-04-2016 YPTB_RS07330 4e42999b4f673c4cdb3cf44512014b22 362 SUPERFAMILY SSF53822 38 345 4.07E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS07330 4e42999b4f673c4cdb3cf44512014b22 362 Gene3D G3DSA:3.40.50.2300 148 345 2.4E-30 T 22-04-2016 YPTB_RS07330 4e42999b4f673c4cdb3cf44512014b22 362 PANTHER PTHR32196 25 350 6.7E-216 T 22-04-2016 YPTB_RS16170 1d66b92fb90f5ffd35c987a7998a6f8c 132 SUPERFAMILY SSF54593 4 129 1.17E-31 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB_RS16170 1d66b92fb90f5ffd35c987a7998a6f8c 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 5.0E-21 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPTB_RS16170 1d66b92fb90f5ffd35c987a7998a6f8c 132 Gene3D G3DSA:3.10.180.10 4 128 2.5E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.5E-28 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 SUPERFAMILY SSF46689 1 80 9.14E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 PANTHER PTHR30514:SF7 1 271 9.7E-198 T 22-04-2016 YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 Pfam PF01380 SIS domain 124 252 2.1E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 Gene3D G3DSA:1.10.10.10 1 80 3.8E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 PANTHER PTHR30514 1 271 9.7E-198 T 22-04-2016 YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 SUPERFAMILY SSF53697 94 277 1.01E-42 T 22-04-2016 YPTB_RS11225 aa7b6561cc9d57fc83612a68f26bfd55 289 Gene3D G3DSA:3.40.50.10490 97 270 2.3E-39 T 22-04-2016 YPTB_RS00155 6a1dc3534e0a1cc81d10190dd3eec773 395 PANTHER PTHR33217 1 375 1.7E-178 T 22-04-2016 YPTB_RS00155 6a1dc3534e0a1cc81d10190dd3eec773 395 Pfam PF00872 Transposase, Mutator family 12 375 2.3E-112 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS00155 6a1dc3534e0a1cc81d10190dd3eec773 395 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPTB_RS21100 81d9045b1035f8e247200021b3ae5b97 421 PANTHER PTHR11751:SF419 11 415 6.2E-189 T 22-04-2016 YPTB_RS21100 81d9045b1035f8e247200021b3ae5b97 421 Gene3D G3DSA:3.90.1150.10 268 410 3.1E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS21100 81d9045b1035f8e247200021b3ae5b97 421 SUPERFAMILY SSF53383 62 410 3.99E-60 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS21100 81d9045b1035f8e247200021b3ae5b97 421 Pfam PF00155 Aminotransferase class I and II 68 391 3.7E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS21100 81d9045b1035f8e247200021b3ae5b97 421 Gene3D G3DSA:3.40.640.10 61 267 5.1E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS21100 81d9045b1035f8e247200021b3ae5b97 421 PANTHER PTHR11751 11 415 6.2E-189 T 22-04-2016 YPTB_RS11345 22bf046cd0f6e5c99a2f645edc43ae78 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 2.3E-280 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YPTB_RS11345 22bf046cd0f6e5c99a2f645edc43ae78 524 PANTHER PTHR10283:SF93 196 524 0.0 T 22-04-2016 YPTB_RS11345 22bf046cd0f6e5c99a2f645edc43ae78 524 PANTHER PTHR10283:SF93 12 168 0.0 T 22-04-2016 YPTB_RS11345 22bf046cd0f6e5c99a2f645edc43ae78 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 7.5E-282 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YPTB_RS11345 22bf046cd0f6e5c99a2f645edc43ae78 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 367.961 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YPTB_RS11345 22bf046cd0f6e5c99a2f645edc43ae78 524 PANTHER PTHR10283 196 524 0.0 T 22-04-2016 YPTB_RS11345 22bf046cd0f6e5c99a2f645edc43ae78 524 PANTHER PTHR10283 12 168 0.0 T 22-04-2016 YPTB_RS19715 68fad138996df6310278ae767dae9920 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 6.5E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19715 68fad138996df6310278ae767dae9920 296 PANTHER PTHR32243 3 296 1.2E-145 T 22-04-2016 YPTB_RS19715 68fad138996df6310278ae767dae9920 296 SUPERFAMILY SSF161098 8 296 1.96E-68 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19715 68fad138996df6310278ae767dae9920 296 Gene3D G3DSA:1.10.3720.10 5 283 1.0E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS19715 68fad138996df6310278ae767dae9920 296 PANTHER PTHR32243:SF4 3 296 1.2E-145 T 22-04-2016 YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 PANTHER PTHR30267 1 644 0.0 T 22-04-2016 YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 PANTHER PTHR30267:SF2 1 644 0.0 T 22-04-2016 YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 Gene3D G3DSA:3.40.50.300 75 158 2.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 Gene3D G3DSA:3.40.50.300 243 329 2.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 9.0E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 PIRSF PIRSF000549 1 644 8.3E-286 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 Pfam PF08298 PrkA AAA domain 20 380 3.1E-175 T 22-04-2016 IPR013153 PrkA AAA domain YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 SUPERFAMILY SSF52540 75 145 6.05E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 SUPERFAMILY SSF52540 241 368 6.05E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11390 a3f01e457c7ce8d2aca2a346e35c852e 644 SMART SM00763 19 380 2.1E-216 T 22-04-2016 IPR013153 PrkA AAA domain YPTB_RS19440 53d3328391a4d46be7cbc3d75dd1062c 329 PANTHER PTHR32196 1 328 4.7E-157 T 22-04-2016 YPTB_RS19440 53d3328391a4d46be7cbc3d75dd1062c 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 8.3E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS19440 53d3328391a4d46be7cbc3d75dd1062c 329 PANTHER PTHR32196:SF35 1 328 4.7E-157 T 22-04-2016 YPTB_RS02995 40c72c776434f96a939bc99fc4845be9 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.951 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B YPTB_RS02995 40c72c776434f96a939bc99fc4845be9 143 PIRSF PIRSF018193 1 143 1.8E-68 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B YPTB_RS02995 40c72c776434f96a939bc99fc4845be9 143 SUPERFAMILY SSF89946 3 123 5.62E-42 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YPTB_RS02995 40c72c776434f96a939bc99fc4845be9 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 6.8E-34 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YPTB_RS02995 40c72c776434f96a939bc99fc4845be9 143 Gene3D G3DSA:3.30.70.970 1 124 1.6E-53 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YPTB_RS10405 ae5e83cdd037c88cf3739e73b227a028 319 Gene3D G3DSA:3.30.420.10 105 265 6.7E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS10405 ae5e83cdd037c88cf3739e73b227a028 319 SUPERFAMILY SSF53098 111 274 1.15E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS10405 ae5e83cdd037c88cf3739e73b227a028 319 Pfam PF00665 Integrase core domain 110 224 2.4E-21 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPTB_RS10405 ae5e83cdd037c88cf3739e73b227a028 319 Pfam PF13565 Homeodomain-like domain 11 82 4.4E-8 T 22-04-2016 YPTB_RS10405 ae5e83cdd037c88cf3739e73b227a028 319 PANTHER PTHR32552 1 284 3.5E-37 T 22-04-2016 YPTB_RS09605 15c740f6e8db2409355488312e25f0b3 389 PANTHER PTHR35861:SF1 1 388 7.7E-121 T 22-04-2016 YPTB_RS09605 15c740f6e8db2409355488312e25f0b3 389 PANTHER PTHR35861 1 388 7.7E-121 T 22-04-2016 YPTB_RS09605 15c740f6e8db2409355488312e25f0b3 389 Pfam PF04984 Phage tail sheath protein 1 92 1.7E-12 T 22-04-2016 IPR007067 Tail sheath protein YPTB_RS09605 15c740f6e8db2409355488312e25f0b3 389 Pfam PF04984 Phage tail sheath protein 92 376 5.2E-54 T 22-04-2016 IPR007067 Tail sheath protein YPTB_RS08805 064699b09075ae01b36702a3b09782ee 426 PANTHER PTHR12778 19 411 1.8E-62 T 22-04-2016 YPTB_RS08805 064699b09075ae01b36702a3b09782ee 426 Pfam PF07690 Major Facilitator Superfamily 25 324 2.8E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS08805 064699b09075ae01b36702a3b09782ee 426 Gene3D G3DSA:1.20.1250.20 229 414 2.1E-10 T 22-04-2016 YPTB_RS08805 064699b09075ae01b36702a3b09782ee 426 SUPERFAMILY SSF103473 4 414 6.93E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS20575 3a4a007bf49a48ecf23f854d637a163f 227 SUPERFAMILY SSF51182 82 175 1.0E-4 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS20575 3a4a007bf49a48ecf23f854d637a163f 227 Pfam PF07385 Protein of unknown function (DUF1498) 1 223 1.0E-100 T 22-04-2016 IPR010864 Protein of unknown function DUF1498 KEGG: 00040+5.3.1.15 YPTB_RS13320 bfb8db4e828ec1e83ddf7360a491653f 288 Pfam PF01636 Phosphotransferase enzyme family 31 234 8.2E-16 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YPTB_RS13320 bfb8db4e828ec1e83ddf7360a491653f 288 Gene3D G3DSA:3.90.1200.10 71 270 1.7E-18 T 22-04-2016 YPTB_RS13320 bfb8db4e828ec1e83ddf7360a491653f 288 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 27 284 2.1E-108 T 22-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 YPTB_RS13320 bfb8db4e828ec1e83ddf7360a491653f 288 SUPERFAMILY SSF56112 10 285 1.28E-37 T 22-04-2016 IPR011009 Protein kinase-like domain YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 PANTHER PTHR11699 1 483 2.9E-273 T 22-04-2016 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 288 299 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 Pfam PF00171 Aldehyde dehydrogenase family 29 483 5.4E-170 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 PANTHER PTHR11699:SF49 1 483 2.9E-273 T 22-04-2016 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 SUPERFAMILY SSF53720 15 487 1.96E-168 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 36 482 1.5E-202 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 Gene3D G3DSA:3.40.605.10 18 273 4.1E-102 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPTB_RS19180 a586569151d39ca215c05ce10ba8d53d 489 Gene3D G3DSA:3.40.309.10 274 459 1.1E-68 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPTB_RS11585 e14c0f10b5f1592b22c441d586064e53 149 SUPERFAMILY SSF54637 15 137 4.84E-39 T 22-04-2016 IPR029069 HotDog domain YPTB_RS11585 e14c0f10b5f1592b22c441d586064e53 149 Pfam PF03061 Thioesterase superfamily 33 104 1.6E-18 T 22-04-2016 IPR006683 Thioesterase domain YPTB_RS11585 e14c0f10b5f1592b22c441d586064e53 149 PANTHER PTHR11049:SF5 11 144 1.9E-80 T 22-04-2016 YPTB_RS11585 e14c0f10b5f1592b22c441d586064e53 149 PANTHER PTHR11049 11 144 1.9E-80 T 22-04-2016 YPTB_RS11585 e14c0f10b5f1592b22c441d586064e53 149 Gene3D G3DSA:3.10.129.10 13 137 1.7E-42 T 22-04-2016 IPR029069 HotDog domain YPTB_RS12405 26fc107a0fedc0f5116b765514bcf27b 271 Pfam PF00005 ABC transporter 31 178 3.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12405 26fc107a0fedc0f5116b765514bcf27b 271 PANTHER PTHR24220:SF81 7 255 1.3E-128 T 22-04-2016 YPTB_RS12405 26fc107a0fedc0f5116b765514bcf27b 271 Gene3D G3DSA:3.40.50.300 2 252 1.5E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12405 26fc107a0fedc0f5116b765514bcf27b 271 SUPERFAMILY SSF52540 5 249 9.82E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12405 26fc107a0fedc0f5116b765514bcf27b 271 PANTHER PTHR24220 7 255 1.3E-128 T 22-04-2016 YPTB_RS12405 26fc107a0fedc0f5116b765514bcf27b 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS12405 26fc107a0fedc0f5116b765514bcf27b 271 SMART SM00382 39 228 2.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS01505 239e3e2d3e7ab9d5eabbb903875c264c 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 2.7E-20 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPTB_RS01505 239e3e2d3e7ab9d5eabbb903875c264c 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 23.003 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPTB_RS01505 239e3e2d3e7ab9d5eabbb903875c264c 88 Pfam PF02416 mttA/Hcf106 family 4 56 3.3E-12 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YPTB_RS01505 239e3e2d3e7ab9d5eabbb903875c264c 88 PANTHER PTHR33162 1 72 2.2E-21 T 22-04-2016 YPTB_RS14590 118bc86eb0a072ef86eb81fbb6b04555 118 PIRSF PIRSF020555 1 118 2.1E-57 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats YPTB_RS14590 118bc86eb0a072ef86eb81fbb6b04555 118 Pfam PF16068 Domain of unknown function (DUF4810) 26 109 2.0E-34 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats YPTB_RS03450 f3f09e0d54b12a3030d80dff14328bee 394 PANTHER PTHR30341:SF0 1 394 7.9E-218 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPTB_RS03450 f3f09e0d54b12a3030d80dff14328bee 394 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 388 23.614 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPTB_RS03450 f3f09e0d54b12a3030d80dff14328bee 394 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 7.2E-174 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPTB_RS03450 f3f09e0d54b12a3030d80dff14328bee 394 Pfam PF06965 Na+/H+ antiporter 1 7 380 9.5E-151 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPTB_RS03450 f3f09e0d54b12a3030d80dff14328bee 394 PANTHER PTHR30341 1 394 7.9E-218 T 22-04-2016 YPTB_RS03450 f3f09e0d54b12a3030d80dff14328bee 394 Gene3D G3DSA:1.20.1530.10 4 384 2.3E-157 T 22-04-2016 IPR023171 Na/H antiporter domain YPTB_RS18775 429c14b5f2cc29444be02b49f7299799 189 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 4.6E-13 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane YPTB_RS18775 429c14b5f2cc29444be02b49f7299799 189 Pfam PF03729 Short repeat of unknown function (DUF308) 84 152 1.9E-11 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane YPTB_RS18775 429c14b5f2cc29444be02b49f7299799 189 PRINTS PR01077 Claudin family signature 47 68 2.4E-5 T 22-04-2016 YPTB_RS18775 429c14b5f2cc29444be02b49f7299799 189 PRINTS PR01077 Claudin family signature 16 38 2.4E-5 T 22-04-2016 YPTB_RS18775 429c14b5f2cc29444be02b49f7299799 189 PANTHER PTHR34989 1 188 7.7E-42 T 22-04-2016 YPTB_RS18775 429c14b5f2cc29444be02b49f7299799 189 PANTHER PTHR34989:SF1 1 188 7.7E-42 T 22-04-2016 YPTB_RS12280 a12d91738f7001e21770eb51449ed4da 110 PANTHER PTHR30561 1 110 2.1E-59 T 22-04-2016 YPTB_RS12280 a12d91738f7001e21770eb51449ed4da 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 2.4E-28 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPTB_RS12280 a12d91738f7001e21770eb51449ed4da 110 PANTHER PTHR30561:SF1 1 110 2.1E-59 T 22-04-2016 YPTB_RS12280 a12d91738f7001e21770eb51449ed4da 110 SUPERFAMILY SSF103481 6 105 8.63E-20 T 22-04-2016 YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 SUPERFAMILY SSF54893 2 100 1.02E-34 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 147 9.2E-19 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.336 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 150 2.7E-64 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 PANTHER PTHR35805:SF1 2 154 3.9E-78 T 22-04-2016 YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 SUPERFAMILY SSF57825 102 149 1.44E-14 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Gene3D G3DSA:2.30.30.20 101 151 1.0E-22 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 PANTHER PTHR35805 2 154 3.9E-78 T 22-04-2016 YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 8.7E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-47 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPTB_RS19115 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Gene3D G3DSA:3.30.70.140 2 98 7.2E-37 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 SUPERFAMILY SSF53335 26 261 7.83E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 28 266 2.2E-65 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 Gene3D G3DSA:3.40.50.150 21 191 1.5E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 20 266 29.202 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 PANTHER PTHR10108 228 263 3.3E-50 T 22-04-2016 YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 PANTHER PTHR10108 28 177 3.3E-50 T 22-04-2016 YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 PANTHER PTHR10108:SF855 228 263 3.3E-50 T 22-04-2016 YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 PANTHER PTHR10108:SF855 28 177 3.3E-50 T 22-04-2016 YPTB_RS06565 2be25eb6557e65217de57630cde2a9fb 267 Pfam PF08241 Methyltransferase domain 63 154 1.4E-24 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 PANTHER PTHR19384:SF73 1 119 1.9E-78 T 22-04-2016 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 PANTHER PTHR19384:SF73 141 168 1.9E-78 T 22-04-2016 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 Gene3D G3DSA:3.40.50.360 1 168 1.6E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 Pfam PF00258 Flavodoxin 5 160 5.4E-27 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.5E-73 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 PANTHER PTHR19384 1 119 1.9E-78 T 22-04-2016 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 PANTHER PTHR19384 141 168 1.9E-78 T 22-04-2016 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 PIRSF PIRSF038996 1 171 3.0E-55 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPTB_RS17165 6f296da2117eff507f9363ae8ed77cb2 172 SUPERFAMILY SSF52218 1 166 6.83E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 SUPERFAMILY SSF51735 121 299 1.0E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 PANTHER PTHR11695:SF28 25 335 2.3E-137 T 22-04-2016 YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 335 7.8E-150 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 SUPERFAMILY SSF50129 11 149 1.98E-38 T 22-04-2016 IPR011032 GroES-like YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 Gene3D G3DSA:3.90.180.10 10 154 1.4E-46 T 22-04-2016 IPR011032 GroES-like YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 114 8.5E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 Gene3D G3DSA:3.40.50.720 155 273 3.8E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 SMART SM00829 20 334 3.9E-57 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 Pfam PF00107 Zinc-binding dehydrogenase 161 285 1.9E-26 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPTB_RS13145 75c9e46e4ba413cdb5712688d3721378 336 PANTHER PTHR11695 25 335 2.3E-137 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 SUPERFAMILY SSF51569 13 252 1.88E-80 T 22-04-2016 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 3.7E-79 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 SMART SM01133 16 252 3.8E-78 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 Gene3D G3DSA:3.20.20.70 14 260 1.8E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 Pfam PF01791 DeoC/LacD family aldolase 18 250 4.5E-45 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 PANTHER PTHR10889:SF3 12 263 1.3E-120 T 22-04-2016 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 PIRSF PIRSF001357 11 261 1.4E-79 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 52.645 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS03290 74ad069f88f06f66b5ea8ab7758ef633 265 PANTHER PTHR10889 12 263 1.3E-120 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPTB_RS20655 4ecc5a6945ab1caedce3618f79804568 422 PANTHER PTHR30354 1 422 7.5E-155 T 22-04-2016 YPTB_RS20655 4ecc5a6945ab1caedce3618f79804568 422 PANTHER PTHR30354:SF1 1 422 7.5E-155 T 22-04-2016 YPTB_RS20655 4ecc5a6945ab1caedce3618f79804568 422 Pfam PF02447 GntP family permease 8 415 1.4E-24 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 Pfam PF00005 ABC transporter 21 169 1.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 SUPERFAMILY SSF52540 1 236 2.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 SUPERFAMILY SSF55021 253 327 2.86E-10 T 22-04-2016 YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 PANTHER PTHR24220:SF186 3 257 1.0E-149 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 Gene3D G3DSA:3.30.70.260 253 328 1.2E-10 T 22-04-2016 YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 SMART SM00382 30 226 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 Pfam PF09383 NIL domain 255 326 1.8E-13 T 22-04-2016 IPR018449 NIL domain YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 PANTHER PTHR24220 3 257 1.0E-149 T 22-04-2016 YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 Gene3D G3DSA:3.40.50.300 1 236 7.8E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07455 ab07d713af53ba26135617a562136bb4 328 SMART SM00930 251 328 2.2E-10 T 22-04-2016 IPR018449 NIL domain YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PANTHER PTHR11963 45 432 4.2E-272 T 22-04-2016 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PANTHER PTHR11963:SF20 45 432 4.2E-272 T 22-04-2016 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 Gene3D G3DSA:3.40.630.10 99 430 3.3E-118 T 22-04-2016 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 2.3E-101 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 Hamap MF_00504 Peptidase B [pepB]. 4 428 70.28 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 Pfam PF12404 Peptidase 6 82 1.1E-35 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 PIRSF PIRSF036388 2 432 1.6E-239 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YPTB_RS15430 c597f6a7df77a63d06178bb2e05e27f6 432 SUPERFAMILY SSF53187 108 427 1.07E-102 T 22-04-2016 YPTB_RS19425 871305680bd53303a84fb68e338c73fb 201 Pfam PF01380 SIS domain 40 169 5.0E-20 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS19425 871305680bd53303a84fb68e338c73fb 201 SUPERFAMILY SSF53697 17 190 1.3E-34 T 22-04-2016 YPTB_RS19425 871305680bd53303a84fb68e338c73fb 201 Gene3D G3DSA:3.40.50.10490 18 191 6.4E-34 T 22-04-2016 YPTB_RS19425 871305680bd53303a84fb68e338c73fb 201 PANTHER PTHR38418 6 200 2.0E-18 T 22-04-2016 YPTB_RS11805 750c5c15aa6699c2a33095107e0ba29e 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 2.4E-83 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YPTB_RS11805 750c5c15aa6699c2a33095107e0ba29e 233 PANTHER PTHR30586:SF0 1 220 1.4E-145 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YPTB_RS11805 750c5c15aa6699c2a33095107e0ba29e 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 2.1E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS11805 750c5c15aa6699c2a33095107e0ba29e 233 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.071 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YPTB_RS11805 750c5c15aa6699c2a33095107e0ba29e 233 PIRSF PIRSF006102 1 218 4.1E-77 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS11805 750c5c15aa6699c2a33095107e0ba29e 233 PANTHER PTHR30586 1 220 1.4E-145 T 22-04-2016 YPTB_RS17060 63b2f6c11fd598fb346b8f73ffdd8f3d 113 SUPERFAMILY SSF55166 9 107 2.94E-16 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS17060 63b2f6c11fd598fb346b8f73ffdd8f3d 113 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 47 106 1.3E-11 T 22-04-2016 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 2.3E-11 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 6.1E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 PANTHER PTHR18901 1 224 1.3E-143 T 22-04-2016 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 PANTHER PTHR18901:SF7 1 224 1.3E-143 T 22-04-2016 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 Gene3D G3DSA:3.40.50.1000 10 216 1.8E-28 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS20325 ba38b511ab295d7ae61665c277592317 226 SUPERFAMILY SSF56784 6 217 4.96E-43 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS00390 81167ce87ba7b13d9a8389791cc4656d 336 Gene3D G3DSA:3.20.20.370 15 243 2.5E-109 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS00390 81167ce87ba7b13d9a8389791cc4656d 336 PANTHER PTHR30105 9 254 1.8E-94 T 22-04-2016 YPTB_RS00390 81167ce87ba7b13d9a8389791cc4656d 336 SUPERFAMILY SSF88713 24 238 6.23E-74 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS00390 81167ce87ba7b13d9a8389791cc4656d 336 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 6.6E-79 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ YPTB_RS12650 dadf1e4310a03f974d1cf604e27e27b2 348 SUPERFAMILY SSF51569 7 347 1.28E-131 T 22-04-2016 YPTB_RS12650 dadf1e4310a03f974d1cf604e27e27b2 348 PANTHER PTHR21225 1 348 2.0E-281 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS12650 dadf1e4310a03f974d1cf604e27e27b2 348 PIRSF PIRSF001361 1 348 6.0E-156 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS12650 dadf1e4310a03f974d1cf604e27e27b2 348 PANTHER PTHR21225:SF6 1 348 2.0E-281 T 22-04-2016 YPTB_RS12650 dadf1e4310a03f974d1cf604e27e27b2 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 5.2E-169 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPTB_RS12650 dadf1e4310a03f974d1cf604e27e27b2 348 Gene3D G3DSA:3.20.20.70 8 347 7.9E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS12650 dadf1e4310a03f974d1cf604e27e27b2 348 Pfam PF00793 DAHP synthetase I family 41 337 6.0E-102 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 SMART SM00344 12 121 6.2E-54 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 SUPERFAMILY SSF54909 74 157 9.52E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 Gene3D G3DSA:3.30.70.920 65 161 1.7E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 Gene3D G3DSA:1.10.10.10 13 64 3.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 PANTHER PTHR30154:SF0 4 162 1.3E-106 T 22-04-2016 YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 SUPERFAMILY SSF46785 12 70 5.69E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.6E-21 T 22-04-2016 YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 PANTHER PTHR30154 4 162 1.3E-106 T 22-04-2016 YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.7E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS07735 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 Pfam PF14559 Tetratricopeptide repeat 191 246 1.7E-5 T 22-04-2016 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 282 315 350.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 107 140 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 214 247 0.61 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 69 102 64.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 180 213 40.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 Pfam PF13176 Tetratricopeptide repeat 71 98 0.03 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 SUPERFAMILY SSF48452 42 138 1.39E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 SUPERFAMILY SSF48452 110 279 3.79E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 PANTHER PTHR23083 8 348 2.0E-43 T 22-04-2016 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.836 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 YPTB_RS11735 1e86bf14c13f9706f0177f218b357f09 389 Gene3D G3DSA:1.25.40.10 39 314 2.4E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS19070 eb3921912448b136df7ba9437fd2df94 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 183 3.1E-55 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YPTB_RS19070 eb3921912448b136df7ba9437fd2df94 187 PANTHER PTHR37481:SF1 2 187 4.0E-71 T 22-04-2016 YPTB_RS19070 eb3921912448b136df7ba9437fd2df94 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 1.5E-53 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related YPTB_RS19070 eb3921912448b136df7ba9437fd2df94 187 PIRSF PIRSF028513 1 187 4.5E-42 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YPTB_RS19070 eb3921912448b136df7ba9437fd2df94 187 PANTHER PTHR37481 2 187 4.0E-71 T 22-04-2016 YPTB_RS19070 eb3921912448b136df7ba9437fd2df94 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.553 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YPTB_RS20070 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 PANTHER PTHR35568:SF3 10 237 1.4E-182 T 22-04-2016 YPTB_RS20070 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 26 141 6.0E-63 T 22-04-2016 IPR013559 YheO-like YPTB_RS20070 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 Pfam PF13309 HTH domain 171 228 3.3E-19 T 22-04-2016 YPTB_RS20070 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 Pfam PF08348 YheO-like PAS domain 29 137 2.6E-35 T 22-04-2016 IPR013559 YheO-like YPTB_RS20070 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 PANTHER PTHR35568 10 237 1.4E-182 T 22-04-2016 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 SMART SM00881 4 100 6.1E-39 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.4E-146 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 Gene3D G3DSA:3.40.50.720 2 118 3.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 PANTHER PTHR11117 1 288 1.8E-198 T 22-04-2016 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 Gene3D G3DSA:3.40.50.261 119 287 8.5E-77 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 SUPERFAMILY SSF51735 1 122 3.38E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 Pfam PF02629 CoA binding domain 6 99 1.7E-32 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 Pfam PF00549 CoA-ligase 151 271 9.2E-21 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 SUPERFAMILY SSF52210 123 287 4.97E-56 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPTB_RS06355 9a12b959891f482fcbbd1ad202f37751 290 PIRSF PIRSF001553 1 290 3.9E-134 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPTB_RS17395 b7602887d5e61b5569c51013b92a5d08 371 Gene3D G3DSA:3.75.10.10 15 370 6.8E-144 T 22-04-2016 YPTB_RS17395 b7602887d5e61b5569c51013b92a5d08 371 Hamap MF_01841 Agmatine deiminase [aguA]. 15 370 59.51 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YPTB_RS17395 b7602887d5e61b5569c51013b92a5d08 371 PANTHER PTHR31377:SF0 5 370 1.6E-190 T 22-04-2016 YPTB_RS17395 b7602887d5e61b5569c51013b92a5d08 371 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 16 370 1.1E-175 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YPTB_RS17395 b7602887d5e61b5569c51013b92a5d08 371 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 24 369 4.4E-121 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YPTB_RS17395 b7602887d5e61b5569c51013b92a5d08 371 PANTHER PTHR31377 5 370 1.6E-190 T 22-04-2016 YPTB_RS17395 b7602887d5e61b5569c51013b92a5d08 371 SUPERFAMILY SSF55909 13 370 3.03E-139 T 22-04-2016 YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 SUPERFAMILY SSF52540 287 339 1.86E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 SUPERFAMILY SSF52540 1 199 1.86E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 SUPERFAMILY SSF52540 368 514 1.86E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 Gene3D G3DSA:3.40.50.300 431 496 3.2E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 3.5E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 PANTHER PTHR11059 2 553 3.8E-184 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 PIRSF PIRSF003128 1 553 1.0E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 9.8E-167 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YPTB_RS06300 bf0a665ff6f111a749cdd1a496c56400 553 Gene3D G3DSA:3.40.50.300 1 206 6.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17665 64a3b175d16b9c1e364409c9d019641d 590 Pfam PF04183 IucA / IucC family 147 375 1.5E-54 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 YPTB_RS17665 64a3b175d16b9c1e364409c9d019641d 590 PANTHER PTHR34384 118 589 1.7E-65 T 22-04-2016 YPTB_RS17665 64a3b175d16b9c1e364409c9d019641d 590 Pfam PF06276 Ferric iron reductase FhuF-like transporter 410 565 2.5E-26 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPTB_RS17665 64a3b175d16b9c1e364409c9d019641d 590 PANTHER PTHR34384:SF4 118 589 1.7E-65 T 22-04-2016 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SUPERFAMILY SSF47413 3 60 6.38E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:3.40.50.2300 174 278 1.9E-36 T 22-04-2016 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 315 2.1E-152 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SUPERFAMILY SSF53822 63 316 3.34E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SMART SM00354 4 74 2.8E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:1.10.260.40 6 56 3.5E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PANTHER PTHR30146:SF42 4 317 2.1E-225 T 22-04-2016 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Pfam PF13377 Periplasmic binding protein-like domain 168 317 1.4E-15 T 22-04-2016 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:3.40.50.2300 57 173 5.1E-22 T 22-04-2016 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PANTHER PTHR30146 4 317 2.1E-225 T 22-04-2016 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.6E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS19130 cf9cd4000d653d9fd700d9d75f0ce0b7 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.449 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 SUPERFAMILY SSF55681 8 292 4.91E-134 T 22-04-2016 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.2E-174 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 Gene3D G3DSA:1.20.58.180 215 298 7.9E-37 T 22-04-2016 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 Gene3D G3DSA:3.30.930.10 4 213 1.3E-105 T 22-04-2016 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 PANTHER PTHR30075 1 304 7.4E-280 T 22-04-2016 YPTB_RS21140 2a0f2bd1e7f38c94e65f09768b3120b2 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 2.9E-149 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPTB_RS16150 10ba1628845ff53e67d7bc89ac372e32 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.197 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YPTB_RS16150 10ba1628845ff53e67d7bc89ac372e32 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 1.0E-30 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YPTB_RS16150 10ba1628845ff53e67d7bc89ac372e32 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 6.1E-37 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YPTB_RS01225 218afb2e0f04ed78f7d375fde17d162f 206 Pfam PF01810 LysE type translocator 14 202 3.1E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS01225 218afb2e0f04ed78f7d375fde17d162f 206 PANTHER PTHR30086 1 205 3.2E-120 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS01225 218afb2e0f04ed78f7d375fde17d162f 206 PANTHER PTHR30086:SF14 1 205 3.2E-120 T 22-04-2016 YPTB_RS01225 218afb2e0f04ed78f7d375fde17d162f 206 PIRSF PIRSF006324 1 205 1.6E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS05345 7fcfa21ca326bf82df3ba3448281cc8d 135 SUPERFAMILY SSF54637 2 129 3.37E-36 T 22-04-2016 IPR029069 HotDog domain YPTB_RS05345 7fcfa21ca326bf82df3ba3448281cc8d 135 PANTHER PTHR31793 1 135 1.4E-104 T 22-04-2016 YPTB_RS05345 7fcfa21ca326bf82df3ba3448281cc8d 135 PIRSF PIRSF003230 1 134 7.1E-21 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPTB_RS05345 7fcfa21ca326bf82df3ba3448281cc8d 135 PANTHER PTHR31793:SF8 1 135 1.4E-104 T 22-04-2016 YPTB_RS05345 7fcfa21ca326bf82df3ba3448281cc8d 135 Pfam PF13279 Thioesterase-like superfamily 12 125 6.0E-16 T 22-04-2016 YPTB_RS05345 7fcfa21ca326bf82df3ba3448281cc8d 135 Gene3D G3DSA:3.10.129.10 2 131 1.1E-40 T 22-04-2016 IPR029069 HotDog domain YPTB_RS05345 7fcfa21ca326bf82df3ba3448281cc8d 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 2.0E-28 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPTB_RS12540 c3293d1fbfa2c49b24aa02f189d494d5 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 383 4.7E-110 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YPTB_RS12540 c3293d1fbfa2c49b24aa02f189d494d5 400 SUPERFAMILY SSF103473 7 392 1.83E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS12540 c3293d1fbfa2c49b24aa02f189d494d5 400 PANTHER PTHR23502 1 388 7.5E-218 T 22-04-2016 YPTB_RS12540 c3293d1fbfa2c49b24aa02f189d494d5 400 Pfam PF07690 Major Facilitator Superfamily 14 344 5.2E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS12540 c3293d1fbfa2c49b24aa02f189d494d5 400 PANTHER PTHR23502:SF28 1 388 7.5E-218 T 22-04-2016 YPTB_RS12540 c3293d1fbfa2c49b24aa02f189d494d5 400 Gene3D G3DSA:1.20.1250.20 203 392 2.5E-10 T 22-04-2016 YPTB_RS12540 c3293d1fbfa2c49b24aa02f189d494d5 400 Gene3D G3DSA:1.20.1250.20 10 192 6.4E-30 T 22-04-2016 YPTB_RS02725 4e9233c3ab1cc6066fe66ea1f11db51f 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.5E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPTB_RS02725 4e9233c3ab1cc6066fe66ea1f11db51f 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 9.1E-22 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPTB_RS02725 4e9233c3ab1cc6066fe66ea1f11db51f 111 PANTHER PTHR34182 2 111 4.3E-37 T 22-04-2016 YPTB_RS02725 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPTB_RS02725 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPTB_RS02725 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPTB_RS02725 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPTB_RS13475 26af517db3bed4f194511418d6f97cb2 95 PANTHER PTHR33336 1 93 1.2E-25 T 22-04-2016 YPTB_RS13475 26af517db3bed4f194511418d6f97cb2 95 SUPERFAMILY SSF54909 3 89 5.78E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS13475 26af517db3bed4f194511418d6f97cb2 95 Gene3D G3DSA:3.30.70.900 3 94 2.5E-32 T 22-04-2016 YPTB_RS13475 26af517db3bed4f194511418d6f97cb2 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 1.9E-17 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YPTB_RS13475 26af517db3bed4f194511418d6f97cb2 95 PANTHER PTHR33336:SF5 1 93 1.2E-25 T 22-04-2016 YPTB_RS09140 5b2acd55de23bff5385453ae4cdd0754 128 Gene3D G3DSA:2.60.40.1220 30 128 2.4E-31 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like YPTB_RS09140 5b2acd55de23bff5385453ae4cdd0754 128 SUPERFAMILY SSF81296 30 128 3.01E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set YPTB_RS09140 5b2acd55de23bff5385453ae4cdd0754 128 Pfam PF04234 CopC domain 31 127 2.6E-24 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 YPTB_RS09140 5b2acd55de23bff5385453ae4cdd0754 128 PANTHER PTHR34820:SF1 5 127 1.6E-13 T 22-04-2016 IPR032694 Copper transport protein YcnJ GO:0006825 YPTB_RS09140 5b2acd55de23bff5385453ae4cdd0754 128 PANTHER PTHR34820 5 127 1.6E-13 T 22-04-2016 YPTB_RS15760 f5cc46fdd778c4de9d7dfd9ade2f04e9 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 1.8E-9 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 YPTB_RS15760 f5cc46fdd778c4de9d7dfd9ade2f04e9 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 8 29 5.2E-8 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 YPTB_RS12315 2e3f762315ac6087e74e41b77ddc5e91 235 SUPERFAMILY SSF53187 134 223 7.61E-34 T 22-04-2016 YPTB_RS12315 2e3f762315ac6087e74e41b77ddc5e91 235 SUPERFAMILY SSF53187 9 107 7.61E-34 T 22-04-2016 YPTB_RS12315 2e3f762315ac6087e74e41b77ddc5e91 235 Gene3D G3DSA:3.40.630.10 8 218 1.6E-40 T 22-04-2016 YPTB_RS12315 2e3f762315ac6087e74e41b77ddc5e91 235 Pfam PF00246 Zinc carboxypeptidase 14 157 2.4E-13 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YPTB_RS03960 a5fcdf846efa77e019f9562c4638bcf0 154 PANTHER PTHR30093 1 82 1.8E-23 T 22-04-2016 YPTB_RS03960 a5fcdf846efa77e019f9562c4638bcf0 154 PANTHER PTHR30093 115 126 1.8E-23 T 22-04-2016 YPTB_RS03960 a5fcdf846efa77e019f9562c4638bcf0 154 SUPERFAMILY SSF54523 34 144 9.94E-23 T 22-04-2016 YPTB_RS03960 a5fcdf846efa77e019f9562c4638bcf0 154 Pfam PF13633 Prokaryotic N-terminal methylation site 10 36 6.6E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS03960 a5fcdf846efa77e019f9562c4638bcf0 154 Gene3D G3DSA:3.30.700.10 13 144 3.4E-31 T 22-04-2016 YPTB_RS03960 a5fcdf846efa77e019f9562c4638bcf0 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 9.1E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS03960 a5fcdf846efa77e019f9562c4638bcf0 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS20845 a2a5c6a29cc94ec61f942945e8830dd8 414 SUPERFAMILY SSF56059 107 308 1.33E-27 T 22-04-2016 YPTB_RS20845 a2a5c6a29cc94ec61f942945e8830dd8 414 Gene3D G3DSA:3.30.470.20 106 363 9.9E-13 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS20845 a2a5c6a29cc94ec61f942945e8830dd8 414 Pfam PF13535 ATP-grasp domain 144 285 1.1E-13 T 22-04-2016 YPTB_RS20845 a2a5c6a29cc94ec61f942945e8830dd8 414 PANTHER PTHR23132 101 281 8.2E-15 T 22-04-2016 YPTB_RS19090 ee33c7c2b815b6057cf067134adc9524 95 Gene3D G3DSA:3.30.160.100 1 95 2.1E-39 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS19090 ee33c7c2b815b6057cf067134adc9524 95 PANTHER PTHR33231 1 95 4.0E-41 T 22-04-2016 YPTB_RS19090 ee33c7c2b815b6057cf067134adc9524 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.2E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS19090 ee33c7c2b815b6057cf067134adc9524 95 SUPERFAMILY SSF69754 1 95 5.36E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS19090 ee33c7c2b815b6057cf067134adc9524 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 7.0E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPTB_RS15775 e5e9d3f071cd5fdfd91f4878338b5ffa 216 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 20 203 2.7E-68 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPTB_RS15775 e5e9d3f071cd5fdfd91f4878338b5ffa 216 PANTHER PTHR30042:SF2 14 211 3.1E-90 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPTB_RS15775 e5e9d3f071cd5fdfd91f4878338b5ffa 216 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 17 204 33.603 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPTB_RS15775 e5e9d3f071cd5fdfd91f4878338b5ffa 216 PANTHER PTHR30042 14 211 3.1E-90 T 22-04-2016 YPTB_RS15775 e5e9d3f071cd5fdfd91f4878338b5ffa 216 Pfam PF02669 K+-transporting ATPase, c chain 21 202 2.3E-66 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPTB_RS15775 e5e9d3f071cd5fdfd91f4878338b5ffa 216 PIRSF PIRSF001296 16 208 3.6E-74 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPTB_RS09945 6fe3f4be4e99cede5b6949edc195e099 160 PANTHER PTHR38107 1 159 1.1E-48 T 22-04-2016 YPTB_RS09945 6fe3f4be4e99cede5b6949edc195e099 160 SUPERFAMILY SSF53955 5 159 2.4E-52 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS09945 6fe3f4be4e99cede5b6949edc195e099 160 Gene3D G3DSA:1.10.530.40 30 158 6.9E-48 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 YPTB_RS09945 6fe3f4be4e99cede5b6949edc195e099 160 PANTHER PTHR38107:SF2 1 159 1.1E-48 T 22-04-2016 YPTB_RS09945 6fe3f4be4e99cede5b6949edc195e099 160 Pfam PF00959 Phage lysozyme 46 151 9.5E-22 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 YPTB_RS18260 6088e00c8c7ea0fd55847ae486b0d76d 157 Pfam PF07811 TadE-like protein 15 56 6.2E-9 T 22-04-2016 IPR012495 TadE-like YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 162 616 55.866 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 155 185 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 646 668 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 5 121 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 213 626 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 155 185 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 646 668 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 5 121 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 213 626 0.0 T 22-04-2016 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 Pfam PF01964 Radical SAM ThiC family 163 611 2.3E-199 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 Pfam PF13667 ThiC-associated domain 42 123 4.0E-34 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPTB_RS01720 8935d167ccd975e3cc251741d0b1ac0a 681 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 162 614 9.8E-223 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 SUPERFAMILY SSF53335 117 370 1.62E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 Gene3D G3DSA:3.40.50.150 117 371 1.1E-92 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 PIRSF PIRSF003085 6 379 2.2E-124 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108:SF795 305 371 4.3E-108 T 22-04-2016 YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108:SF795 27 289 4.3E-108 T 22-04-2016 YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 4.3E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108 305 371 4.3E-108 T 22-04-2016 YPTB_RS12545 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108 27 289 4.3E-108 T 22-04-2016 YPTB_RS11795 a8a4a0f1228e0a4042c308d721c64799 332 SUPERFAMILY SSF51735 1 318 7.56E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11795 a8a4a0f1228e0a4042c308d721c64799 332 Gene3D G3DSA:3.90.25.10 190 303 1.3E-40 T 22-04-2016 YPTB_RS11795 a8a4a0f1228e0a4042c308d721c64799 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 4.9E-19 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS11795 a8a4a0f1228e0a4042c308d721c64799 332 PANTHER PTHR10366 2 318 4.7E-95 T 22-04-2016 YPTB_RS11795 a8a4a0f1228e0a4042c308d721c64799 332 Gene3D G3DSA:3.40.50.720 2 189 1.4E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11795 a8a4a0f1228e0a4042c308d721c64799 332 PANTHER PTHR10366:SF440 2 318 4.7E-95 T 22-04-2016 YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 PANTHER PTHR24421:SF1 173 501 2.6E-44 T 22-04-2016 YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 Pfam PF05231 MASE1 7 282 6.9E-17 T 22-04-2016 IPR007895 MASE1 YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 Gene3D G3DSA:3.30.565.10 401 501 2.9E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 500 8.6E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 SUPERFAMILY SSF55874 384 500 8.25E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 Pfam PF07730 Histidine kinase 310 373 8.0E-10 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 PANTHER PTHR24421 173 501 2.6E-44 T 22-04-2016 YPTB_RS20795 e401ef15b3f73838f8fe0c6207374513 509 SMART SM00387 413 503 6.3E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPTB_RS03330 b6d757bf3ed8ce76376265c7ce02db66 376 Pfam PF13776 Domain of unknown function (DUF4172) 6 87 2.0E-26 T 22-04-2016 IPR025230 Domain of unknown function DUF4172 YPTB_RS03330 b6d757bf3ed8ce76376265c7ce02db66 376 Gene3D G3DSA:1.10.3290.10 27 301 4.0E-57 T 22-04-2016 IPR003812 Fido domain YPTB_RS03330 b6d757bf3ed8ce76376265c7ce02db66 376 PANTHER PTHR13504 1 376 2.3E-214 T 22-04-2016 YPTB_RS03330 b6d757bf3ed8ce76376265c7ce02db66 376 Pfam PF02661 Fic/DOC family 117 227 9.1E-17 T 22-04-2016 IPR003812 Fido domain YPTB_RS03330 b6d757bf3ed8ce76376265c7ce02db66 376 Gene3D G3DSA:1.10.10.10 304 363 1.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS03330 b6d757bf3ed8ce76376265c7ce02db66 376 PANTHER PTHR13504:SF33 1 376 2.3E-214 T 22-04-2016 YPTB_RS03330 b6d757bf3ed8ce76376265c7ce02db66 376 SUPERFAMILY SSF140931 103 298 9.42E-39 T 22-04-2016 IPR003812 Fido domain YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 461 1.1E-196 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 Gene3D G3DSA:3.40.50.300 150 432 5.8E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 SMART SM00382 185 368 5.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 SUPERFAMILY SSF52540 120 390 4.02E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 173 384 6.8E-71 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 PANTHER PTHR15184 5 96 4.7E-238 T 22-04-2016 YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 PANTHER PTHR15184 115 464 4.7E-238 T 22-04-2016 YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 PANTHER PTHR15184:SF9 5 96 4.7E-238 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 PANTHER PTHR15184:SF9 115 464 4.7E-238 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 464 3.5E-188 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS09350 e77e1f4d70a418e4e16e756b29b63f7c 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 375 384 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPTB_RS07045 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 PANTHER PTHR12110 1 256 4.2E-160 T 22-04-2016 YPTB_RS07045 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 PANTHER PTHR12110:SF12 1 256 4.2E-160 T 22-04-2016 YPTB_RS07045 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 Gene3D G3DSA:3.20.20.150 1 254 1.2E-73 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS07045 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 6.6E-28 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS07045 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 PIRSF PIRSF006241 1 261 1.4E-88 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 YPTB_RS07045 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 SUPERFAMILY SSF51658 1 254 2.21E-71 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB_RS18685 393028e4e8da131bedf40a06e1a39159 641 Pfam PF04829 Pre-toxin domain with VENN motif 334 383 4.0E-21 T 22-04-2016 IPR006914 VENN motif-containing domain YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 3.7E-19 T 22-04-2016 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.7E-19 T 22-04-2016 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 3.7E-19 T 22-04-2016 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 3.7E-19 T 22-04-2016 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 Gene3D G3DSA:3.30.9.10 173 219 3.6E-4 T 22-04-2016 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 Gene3D G3DSA:3.50.50.60 272 360 1.7E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 Gene3D G3DSA:3.50.50.60 3 172 1.7E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 Pfam PF01494 FAD binding domain 5 349 1.4E-29 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 394 2.8E-140 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 PANTHER PTHR13789 1 404 1.0E-187 T 22-04-2016 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 SUPERFAMILY SSF51905 271 388 1.53E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 SUPERFAMILY SSF51905 4 180 1.53E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17245 a2d0648fa7fccb8eda08931b8d7fe019 406 PANTHER PTHR13789:SF5 1 404 1.0E-187 T 22-04-2016 YPTB_RS18630 141ec6fbe4d9d9e78324013d9882e20b 414 Pfam PF01547 Bacterial extracellular solute-binding protein 34 324 2.6E-25 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPTB_RS18630 141ec6fbe4d9d9e78324013d9882e20b 414 Gene3D G3DSA:3.40.190.10 127 348 6.5E-30 T 22-04-2016 YPTB_RS18630 141ec6fbe4d9d9e78324013d9882e20b 414 SUPERFAMILY SSF53850 22 411 3.59E-46 T 22-04-2016 YPTB_RS18630 141ec6fbe4d9d9e78324013d9882e20b 414 PANTHER PTHR30061:SF1 1 414 1.5E-69 T 22-04-2016 YPTB_RS18630 141ec6fbe4d9d9e78324013d9882e20b 414 PANTHER PTHR30061 1 414 1.5E-69 T 22-04-2016 YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 Gene3D G3DSA:3.40.50.150 184 212 8.7E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 Gene3D G3DSA:3.40.50.150 5 124 8.7E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 Gene3D G3DSA:3.90.120.10 402 403 1.8E-17 T 22-04-2016 YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 Gene3D G3DSA:3.90.120.10 213 266 1.8E-17 T 22-04-2016 YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 Gene3D G3DSA:3.90.120.10 497 559 1.8E-17 T 22-04-2016 YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 PANTHER PTHR10629 2 153 2.9E-40 T 22-04-2016 YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 PANTHER PTHR10629 185 286 2.9E-40 T 22-04-2016 YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 Pfam PF00145 C-5 cytosine-specific DNA methylase 508 566 1.4E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 121 5.5E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 SUPERFAMILY SSF53335 471 566 9.41E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 SUPERFAMILY SSF53335 2 153 9.41E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 SUPERFAMILY SSF53335 185 265 9.41E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 PANTHER PTHR10629:SF32 2 153 2.9E-40 T 22-04-2016 YPTB_RS09905 a5c0f0aeb118bc863ca327d3b72e20c5 581 PANTHER PTHR10629:SF32 185 286 2.9E-40 T 22-04-2016 YPTB_RS20030 96055f2032bce55f850cd698f59e4ab5 64 PANTHER PTHR37424 2 64 4.6E-22 T 22-04-2016 YPTB_RS20030 96055f2032bce55f850cd698f59e4ab5 64 PANTHER PTHR37424:SF1 2 64 4.6E-22 T 22-04-2016 YPTB_RS20030 96055f2032bce55f850cd698f59e4ab5 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 6.8E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YPTB_RS10225 e3ad5bb6d33e72d1ffc59d318821f222 271 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 271 2.0E-115 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 PANTHER PTHR10091:SF0 14 354 2.8E-143 T 22-04-2016 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 Gene3D G3DSA:2.70.98.10 17 351 4.0E-122 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 PIRSF PIRSF005096 9 354 8.9E-124 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 19 351 1.5E-144 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 PANTHER PTHR10091 14 354 2.8E-143 T 22-04-2016 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 Pfam PF01263 Aldose 1-epimerase 25 350 4.2E-92 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 YPTB_RS06480 3aae8b24fe810675e9c5470910de4cf6 356 SUPERFAMILY SSF74650 15 351 1.26E-110 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPTB_RS11740 fa2b0ab0f7b1552452694849ba9a5ea7 99 SUPERFAMILY SSF47598 1 44 4.08E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPTB_RS11740 fa2b0ab0f7b1552452694849ba9a5ea7 99 Gene3D G3DSA:1.10.1220.10 2 51 8.9E-8 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPTB_RS04940 285a8ae1c741f24d0cc32615229eb1ca 266 PANTHER PTHR37838 2 266 6.4E-119 T 22-04-2016 YPTB_RS04940 285a8ae1c741f24d0cc32615229eb1ca 266 SMART SM00900 151 249 1.4E-36 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPTB_RS04940 285a8ae1c741f24d0cc32615229eb1ca 266 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 261 36.735 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YPTB_RS04940 285a8ae1c741f24d0cc32615229eb1ca 266 PIRSF PIRSF009437 2 264 5.6E-102 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YPTB_RS04940 285a8ae1c741f24d0cc32615229eb1ca 266 Pfam PF04205 FMN-binding domain 151 246 6.2E-17 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPTB_RS04940 285a8ae1c741f24d0cc32615229eb1ca 266 PANTHER PTHR37838:SF1 2 266 6.4E-119 T 22-04-2016 YPTB_RS04940 285a8ae1c741f24d0cc32615229eb1ca 266 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 9 257 5.9E-102 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YPTB_RS11155 4f9a4da33a91045c362033b3a2b9f65b 131 PANTHER PTHR35814 1 131 1.6E-75 T 22-04-2016 YPTB_RS11155 4f9a4da33a91045c362033b3a2b9f65b 131 Pfam PF01124 MAPEG family 4 120 2.2E-24 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPTB_RS11155 4f9a4da33a91045c362033b3a2b9f65b 131 Gene3D G3DSA:1.20.120.550 4 123 5.1E-23 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain YPTB_RS11155 4f9a4da33a91045c362033b3a2b9f65b 131 PANTHER PTHR35814:SF2 1 131 1.6E-75 T 22-04-2016 YPTB_RS11155 4f9a4da33a91045c362033b3a2b9f65b 131 SUPERFAMILY SSF161084 4 125 8.11E-30 T 22-04-2016 YPTB_RS15025 98335622b917a6cfbe6394f2c283d35d 157 Pfam PF12688 Tetratrico peptide repeat 35 153 7.7E-11 T 22-04-2016 YPTB_RS15025 98335622b917a6cfbe6394f2c283d35d 157 Gene3D G3DSA:1.25.40.10 7 149 6.9E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS15025 98335622b917a6cfbe6394f2c283d35d 157 SUPERFAMILY SSF48452 8 123 1.42E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 Gene3D G3DSA:2.160.10.10 143 251 3.7E-31 T 22-04-2016 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.9E-37 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 PANTHER PTHR23416 5 258 7.8E-156 T 22-04-2016 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 22-04-2016 IPR001451 Hexapeptide repeat YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 PANTHER PTHR23416:SF2 5 258 7.8E-156 T 22-04-2016 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 Gene3D G3DSA:1.10.3130.10 7 142 6.8E-50 T 22-04-2016 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 1.6E-73 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 SUPERFAMILY SSF51161 8 260 8.32E-67 T 22-04-2016 IPR011004 Trimeric LpxA-like YPTB_RS00430 5b37906d5268982dce2c52f3a6f72404 273 SMART SM00971 9 113 1.4E-59 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YPTB_RS09185 3e16212770174782d9d10375c878dbc7 289 PRINTS PR01369 Intimin signature 245 264 3.9E-7 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS09185 3e16212770174782d9d10375c878dbc7 289 PRINTS PR01369 Intimin signature 217 232 3.9E-7 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPTB_RS09185 3e16212770174782d9d10375c878dbc7 289 PANTHER PTHR39576 45 289 4.3E-89 T 22-04-2016 YPTB_RS09185 3e16212770174782d9d10375c878dbc7 289 PANTHER PTHR39576:SF2 45 289 4.3E-89 T 22-04-2016 YPTB_RS09185 3e16212770174782d9d10375c878dbc7 289 Pfam PF11924 Invasin beta-domain of outer membrane 103 288 1.4E-74 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YPTB_RS12600 b8a058e33c17439932c3b49d352c15b8 441 PANTHER PTHR30508:SF0 48 439 9.0E-154 T 22-04-2016 YPTB_RS12600 b8a058e33c17439932c3b49d352c15b8 441 PANTHER PTHR30508 48 439 9.0E-154 T 22-04-2016 YPTB_RS12600 b8a058e33c17439932c3b49d352c15b8 441 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 427 2.7E-89 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 YPTB_RS12600 b8a058e33c17439932c3b49d352c15b8 441 Pfam PF01458 Uncharacterized protein family (UPF0051) 188 411 2.7E-74 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YPTB_RS12600 b8a058e33c17439932c3b49d352c15b8 441 SUPERFAMILY SSF101960 48 436 6.02E-114 T 22-04-2016 YPTB_RS04435 95f9a8840c479476536dfa4216699a07 353 PANTHER PTHR32196 1 340 7.0E-194 T 22-04-2016 YPTB_RS04435 95f9a8840c479476536dfa4216699a07 353 PANTHER PTHR32196:SF39 1 340 7.0E-194 T 22-04-2016 YPTB_RS04435 95f9a8840c479476536dfa4216699a07 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 316 1.0E-23 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 Gene3D G3DSA:3.40.190.10 180 264 3.5E-20 T 22-04-2016 YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 Gene3D G3DSA:1.10.10.10 7 91 3.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 PANTHER PTHR30537 1 312 2.0E-220 T 22-04-2016 YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 PANTHER PTHR30537:SF18 1 312 2.0E-220 T 22-04-2016 YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 Gene3D G3DSA:3.40.190.10 95 179 1.5E-18 T 22-04-2016 YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 SUPERFAMILY SSF53850 91 298 1.79E-38 T 22-04-2016 YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 Pfam PF03466 LysR substrate binding domain 90 294 3.1E-34 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 SUPERFAMILY SSF46785 8 114 8.62E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13755 3cdc5df1bcb590a6ca9824ee653ccc8f 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS13865 337db148571b0bea4698710324b42c43 319 Gene3D G3DSA:1.20.970.10 7 69 4.8E-18 T 22-04-2016 YPTB_RS13865 337db148571b0bea4698710324b42c43 319 Gene3D G3DSA:3.40.1030.10 79 316 4.9E-37 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS13865 337db148571b0bea4698710324b42c43 319 SUPERFAMILY SSF52418 79 316 9.73E-45 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS13865 337db148571b0bea4698710324b42c43 319 Pfam PF00591 Glycosyl transferase family, a/b domain 94 316 3.4E-5 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPTB_RS13865 337db148571b0bea4698710324b42c43 319 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 2.0E-9 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB_RS13865 337db148571b0bea4698710324b42c43 319 SUPERFAMILY SSF47648 7 70 1.31E-13 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 PANTHER PTHR30469:SF12 2 44 2.0E-201 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 PANTHER PTHR30469:SF12 60 407 2.0E-201 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 415 55.116 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 Gene3D G3DSA:2.40.50.100 197 232 2.7E-24 T 22-04-2016 YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 Gene3D G3DSA:2.40.50.100 88 122 2.7E-24 T 22-04-2016 YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 PANTHER PTHR30469 2 44 2.0E-201 T 22-04-2016 YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 PANTHER PTHR30469 60 407 2.0E-201 T 22-04-2016 YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 Pfam PF13533 Biotin-lipoyl like 89 137 1.8E-16 T 22-04-2016 YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 Pfam PF13437 HlyD family secretion protein 200 306 5.7E-7 T 22-04-2016 YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 SUPERFAMILY SSF111369 81 320 6.67E-57 T 22-04-2016 YPTB_RS15225 a629487ccd23392832ead8592c273c98 444 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 396 8.4E-77 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS16040 056469338fb23e76f5e42acc31aae2a3 239 Pfam PF08241 Methyltransferase domain 77 125 1.1E-8 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YPTB_RS16040 056469338fb23e76f5e42acc31aae2a3 239 PANTHER PTHR10108:SF836 77 219 2.2E-93 T 22-04-2016 YPTB_RS16040 056469338fb23e76f5e42acc31aae2a3 239 SUPERFAMILY SSF53335 77 182 2.87E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS16040 056469338fb23e76f5e42acc31aae2a3 239 Gene3D G3DSA:3.40.50.150 66 206 7.8E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS16040 056469338fb23e76f5e42acc31aae2a3 239 PANTHER PTHR10108 77 219 2.2E-93 T 22-04-2016 YPTB_RS00895 a33ade485d91ee5f3da02981f945568b 478 Pfam PF06958 S-type Pyocin 186 326 2.4E-39 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YPTB_RS00895 a33ade485d91ee5f3da02981f945568b 478 SUPERFAMILY SSF69369 102 359 1.44E-56 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YPTB_RS17095 63a9a5a8a0d2c1c3f72fd15de6740201 394 Pfam PF04865 Baseplate J-like protein 82 328 1.4E-31 T 22-04-2016 IPR006949 Baseplate protein J-like YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 PANTHER PTHR11649 5 303 9.1E-127 T 22-04-2016 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 Hamap MF_00367 GTPase Era [era]. 7 298 35.886 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 281 7.7E-118 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 Gene3D G3DSA:3.40.50.300 9 194 2.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 Pfam PF01926 50S ribosome-binding GTPase 12 126 2.3E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 Pfam PF07650 KH domain 210 286 2.4E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 PANTHER PTHR11649:SF3 5 303 9.1E-127 T 22-04-2016 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 171 8.5E-41 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 Gene3D G3DSA:3.30.300.20 195 295 1.0E-40 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 SUPERFAMILY SSF54814 183 298 2.42E-42 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPTB_RS15615 d46e1d42bae8741a68fa3277ad8acd3e 303 SUPERFAMILY SSF52540 12 206 2.39E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS03085 5a6e7ef1e02dcdf5114356b052d31429 360 PANTHER PTHR30505:SF1 1 359 2.9E-165 T 22-04-2016 YPTB_RS03085 5a6e7ef1e02dcdf5114356b052d31429 360 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 9 335 1.3E-91 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 YPTB_RS03085 5a6e7ef1e02dcdf5114356b052d31429 360 Pfam PF02378 Phosphotransferase system, EIIC 17 282 5.4E-13 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPTB_RS03085 5a6e7ef1e02dcdf5114356b052d31429 360 PANTHER PTHR30505 1 359 2.9E-165 T 22-04-2016 YPTB_RS19470 b4f3745e83c0ecf3b218b4fb262452da 451 PANTHER PTHR11119:SF43 1 446 2.7E-297 T 22-04-2016 YPTB_RS19470 b4f3745e83c0ecf3b218b4fb262452da 451 PANTHER PTHR11119 1 446 2.7E-297 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS19470 b4f3745e83c0ecf3b218b4fb262452da 451 Pfam PF00860 Permease family 28 411 4.3E-82 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS09530 bba318e8d59d26d4c87a289382df2b95 113 Pfam PF06942 GlpM protein 5 111 2.7E-50 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC YPTB_RS09530 bba318e8d59d26d4c87a289382df2b95 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 14 111 2.0E-49 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 SUPERFAMILY SSF88697 4 72 8.45E-16 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 Gene3D G3DSA:3.40.50.150 185 395 1.6E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 PANTHER PTHR11061 5 396 4.8E-125 T 22-04-2016 YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 67.868 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 SUPERFAMILY SSF53335 79 392 2.39E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 SMART SM00359 3 88 5.9E-12 T 22-04-2016 IPR002478 PUA domain GO:0003723 YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 PANTHER PTHR11061:SF12 5 396 4.8E-125 T 22-04-2016 YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 Gene3D G3DSA:2.30.130.10 4 72 1.6E-25 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 Gene3D G3DSA:3.30.750.80 74 180 9.5E-35 T 22-04-2016 YPTB_RS08065 282365fc364266a1231ee08d4e682e51 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 370 4.1E-27 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YPTB_RS20855 e49339d597dc2987a819ab32535cb556 319 PANTHER PTHR30472:SF27 1 319 2.8E-183 T 22-04-2016 YPTB_RS20855 e49339d597dc2987a819ab32535cb556 319 SUPERFAMILY SSF81345 5 313 1.7E-67 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS20855 e49339d597dc2987a819ab32535cb556 319 Pfam PF01032 FecCD transport family 13 313 3.2E-65 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS20855 e49339d597dc2987a819ab32535cb556 319 Gene3D G3DSA:1.10.3470.10 4 315 4.4E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS20855 e49339d597dc2987a819ab32535cb556 319 PANTHER PTHR30472 1 319 2.8E-183 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-26 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.039 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 PANTHER PTHR33343 1 65 1.7E-28 T 22-04-2016 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.2E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.2E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.2E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 Pfam PF01632 Ribosomal protein L35 2 60 2.5E-23 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS12745 3900421b7bba8c1069ad460262660cfa 65 SUPERFAMILY SSF143034 2 64 1.44E-22 T 22-04-2016 YPTB_RS12095 fc63dcda81bc1be94dd3ac19af1f078e 95 PANTHER PTHR30239:SF4 1 95 9.5E-58 T 22-04-2016 YPTB_RS12095 fc63dcda81bc1be94dd3ac19af1f078e 95 Pfam PF13710 ACT domain 14 74 2.8E-9 T 22-04-2016 YPTB_RS12095 fc63dcda81bc1be94dd3ac19af1f078e 95 PANTHER PTHR30239 1 95 9.5E-58 T 22-04-2016 YPTB_RS12095 fc63dcda81bc1be94dd3ac19af1f078e 95 Gene3D G3DSA:3.30.70.260 4 77 1.1E-20 T 22-04-2016 YPTB_RS12095 fc63dcda81bc1be94dd3ac19af1f078e 95 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 74 3.0E-15 T 22-04-2016 YPTB_RS12095 fc63dcda81bc1be94dd3ac19af1f078e 95 SUPERFAMILY SSF55021 4 77 2.12E-16 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 113 621 7.0E-202 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 Gene3D G3DSA:3.55.50.10 201 293 2.4E-35 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 PANTHER PTHR32305:SF11 16 723 0.0 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 SUPERFAMILY SSF69349 543 731 1.88E-41 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 PANTHER PTHR32305 16 723 0.0 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 Gene3D G3DSA:2.40.50.230 471 552 5.5E-41 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 SUPERFAMILY SSF69279 292 466 7.82E-42 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 SUPERFAMILY SSF69279 113 288 2.89E-56 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 Pfam PF05954 Phage late control gene D protein (GPD) 133 430 2.9E-83 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 SUPERFAMILY SSF69255 465 552 6.02E-34 T 22-04-2016 YPTB_RS19595 e790d4daa7dbb632c1be793853c15850 739 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 125 604 5.0E-192 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB_RS04835 04fc955117c7728dd5d880804a6fe678 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 210 7.3E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS04835 04fc955117c7728dd5d880804a6fe678 217 Gene3D G3DSA:1.10.3720.10 10 212 1.9E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS04835 04fc955117c7728dd5d880804a6fe678 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 3.3E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS04835 04fc955117c7728dd5d880804a6fe678 217 PANTHER PTHR30614 6 217 1.2E-85 T 22-04-2016 YPTB_RS04835 04fc955117c7728dd5d880804a6fe678 217 SUPERFAMILY SSF161098 12 203 1.24E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS17150 e6110dbf47a55c147b994e2bc0fbf3b4 577 PANTHER PTHR30255:SF2 4 576 6.7E-229 T 22-04-2016 YPTB_RS17150 e6110dbf47a55c147b994e2bc0fbf3b4 577 PANTHER PTHR30255 4 576 6.7E-229 T 22-04-2016 YPTB_RS17150 e6110dbf47a55c147b994e2bc0fbf3b4 577 Pfam PF01368 DHH family 74 200 9.1E-11 T 22-04-2016 IPR001667 DDH domain YPTB_RS17150 e6110dbf47a55c147b994e2bc0fbf3b4 577 SUPERFAMILY SSF64182 49 466 5.49E-117 T 22-04-2016 YPTB_RS17150 e6110dbf47a55c147b994e2bc0fbf3b4 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 1.6E-159 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 YPTB_RS17150 e6110dbf47a55c147b994e2bc0fbf3b4 577 Pfam PF02272 DHHA1 domain 382 449 4.6E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 YPTB_RS21005 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196 240 393 1.3E-179 T 22-04-2016 YPTB_RS21005 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196 1 184 1.3E-179 T 22-04-2016 YPTB_RS21005 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196:SF32 240 393 1.3E-179 T 22-04-2016 YPTB_RS21005 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196:SF32 1 184 1.3E-179 T 22-04-2016 YPTB_RS21005 47a45151ba7d080ca86b78255cc28f6a 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 384 9.9E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS19935 7cd6b047f5dcf98077b20479ca32345f 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.4E-44 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19935 7cd6b047f5dcf98077b20479ca32345f 117 SUPERFAMILY SSF53137 3 115 2.62E-53 T 22-04-2016 YPTB_RS19935 7cd6b047f5dcf98077b20479ca32345f 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.4E-46 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19935 7cd6b047f5dcf98077b20479ca32345f 117 PANTHER PTHR12899 1 117 3.8E-49 T 22-04-2016 YPTB_RS19935 7cd6b047f5dcf98077b20479ca32345f 117 Gene3D G3DSA:3.30.420.100 24 117 7.4E-37 T 22-04-2016 YPTB_RS19935 7cd6b047f5dcf98077b20479ca32345f 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.23 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS13290 a1f00152dd38ddd23ae095932cda2cc1 179 PANTHER PTHR35603 1 177 4.0E-98 T 22-04-2016 YPTB_RS13290 a1f00152dd38ddd23ae095932cda2cc1 179 PANTHER PTHR35603:SF2 1 177 4.0E-98 T 22-04-2016 YPTB_RS13290 a1f00152dd38ddd23ae095932cda2cc1 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.8E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 408 451 1.7E-10 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 452 7.3E-127 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 Pfam PF00460 Flagella basal body rod protein 4 33 5.0E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 PRINTS PR01005 Flagellar hook-associated protein signature 444 453 6.62E-12 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 6.62E-12 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 6.62E-12 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 6.62E-12 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 6.62E-12 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 SUPERFAMILY SSF64518 145 452 9.68E-21 T 22-04-2016 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 PANTHER PTHR30033 1 453 3.4E-117 T 22-04-2016 YPTB_RS18015 45eeb36664fbe69be44384d4c928a002 453 PANTHER PTHR30033:SF1 1 453 3.4E-117 T 22-04-2016 YPTB_RS13745 9f82a799d277ccde8016c5ea01f9f43e 543 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 498 1.8E-148 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPTB_RS13745 9f82a799d277ccde8016c5ea01f9f43e 543 PANTHER PTHR30047 1 543 0.0 T 22-04-2016 YPTB_RS13745 9f82a799d277ccde8016c5ea01f9f43e 543 PANTHER PTHR30047:SF5 1 543 0.0 T 22-04-2016 YPTB_RS13745 9f82a799d277ccde8016c5ea01f9f43e 543 ProSitePatterns PS01303 BCCT family of transporters signature. 311 320 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPTB_RS13745 9f82a799d277ccde8016c5ea01f9f43e 543 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 498 8.4E-118 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPTB_RS01955 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 PANTHER PTHR30574:SF6 1 344 1.6E-258 T 22-04-2016 YPTB_RS01955 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 Pfam PF04143 Sulphur transport 5 160 9.3E-25 T 22-04-2016 IPR007272 Sulphur transport domain YPTB_RS01955 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 Pfam PF04143 Sulphur transport 237 394 1.0E-24 T 22-04-2016 IPR007272 Sulphur transport domain YPTB_RS01955 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 PANTHER PTHR30574 1 344 1.6E-258 T 22-04-2016 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 Pfam PF00717 Peptidase S24-like 93 165 3.5E-20 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 Gene3D G3DSA:2.170.230.10 162 271 5.1E-39 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 ProSitePatterns PS00761 Signal peptidases I signature 3. 277 290 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 Gene3D G3DSA:2.10.109.10 272 317 3.0E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 Gene3D G3DSA:2.10.109.10 83 161 3.0E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 PANTHER PTHR12383 3 182 4.6E-135 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 PANTHER PTHR12383 254 316 4.6E-135 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 Pfam PF10502 Signal peptidase, peptidase S26 270 310 3.9E-6 T 22-04-2016 IPR019533 Peptidase S26 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 ProSitePatterns PS00501 Signal peptidases I serine active site. 96 103 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 268 312 3.9E-17 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 72 166 4.6E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 ProSitePatterns PS00760 Signal peptidases I lysine active site. 153 165 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 SUPERFAMILY SSF51306 85 331 7.85E-77 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 PANTHER PTHR12383:SF27 3 182 4.6E-135 T 22-04-2016 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 PANTHER PTHR12383:SF27 254 316 4.6E-135 T 22-04-2016 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 103 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 272 291 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPTB_RS15625 c3a2ad10a82f0c6986349b55f8576db5 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 151 163 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPTB_RS09145 d9e179be035d32ee4faf25b65098da5f 294 PANTHER PTHR34820:SF2 1 294 8.9E-91 T 22-04-2016 YPTB_RS09145 d9e179be035d32ee4faf25b65098da5f 294 PANTHER PTHR34820 1 294 8.9E-91 T 22-04-2016 YPTB_RS09145 d9e179be035d32ee4faf25b65098da5f 294 Pfam PF05425 Copper resistance protein D 189 287 1.7E-19 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 YPTB_RS16455 46439a05caafb71b669e6c240397e706 228 SMART SM00927 59 157 1.9E-66 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YPTB_RS16455 46439a05caafb71b669e6c240397e706 228 SUPERFAMILY SSF52980 9 227 1.93E-80 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPTB_RS16455 46439a05caafb71b669e6c240397e706 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 152.963 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YPTB_RS16455 46439a05caafb71b669e6c240397e706 228 Gene3D G3DSA:3.40.600.10 8 226 8.1E-78 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YPTB_RS16455 46439a05caafb71b669e6c240397e706 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 1.3E-106 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YPTB_RS16455 46439a05caafb71b669e6c240397e706 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 2.7E-34 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YPTB_RS16200 993945f867693e838b335f638b59232a 176 SUPERFAMILY SSF54637 10 151 1.1E-50 T 22-04-2016 IPR029069 HotDog domain YPTB_RS16200 993945f867693e838b335f638b59232a 176 PANTHER PTHR30272 1 151 1.2E-89 T 22-04-2016 YPTB_RS16200 993945f867693e838b335f638b59232a 176 Pfam PF07977 FabA-like domain 17 141 2.1E-40 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPTB_RS16200 993945f867693e838b335f638b59232a 176 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.239 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPTB_RS16200 993945f867693e838b335f638b59232a 176 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.7E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPTB_RS16200 993945f867693e838b335f638b59232a 176 Gene3D G3DSA:3.10.129.10 4 147 3.2E-58 T 22-04-2016 IPR029069 HotDog domain YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Gene3D G3DSA:3.40.50.300 450 599 2.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 PANTHER PTHR11472:SF37 15 621 9.9E-245 T 22-04-2016 YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Pfam PF13307 Helicase C-terminal domain 459 616 2.2E-34 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SMART SM00487 16 342 0.0019 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 PANTHER PTHR11472 15 621 9.9E-245 T 22-04-2016 YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Pfam PF06733 DEAD_2 181 247 5.6E-5 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SMART SM00491 474 603 2.4E-54 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Pfam PF00270 DEAD/DEAH box helicase 30 82 1.7E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SUPERFAMILY SSF52540 573 598 7.41E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SUPERFAMILY SSF52540 40 88 7.41E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SUPERFAMILY SSF52540 477 542 7.41E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Gene3D G3DSA:3.40.50.300 4 116 6.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Gene3D G3DSA:3.40.50.300 190 234 6.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11260 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SUPERFAMILY SSF52540 13 232 4.08E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 SUPERFAMILY SSF46557 3 78 4.05E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.7E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 SUPERFAMILY SSF54534 81 157 1.28E-24 T 22-04-2016 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.7E-60 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 PIRSF PIRSF006092 1 158 1.6E-55 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 9.6E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 Gene3D G3DSA:3.10.50.30 79 157 3.0E-32 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 PANTHER PTHR30437 1 157 8.1E-77 T 22-04-2016 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.737 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 Gene3D G3DSA:1.10.287.180 1 75 8.6E-36 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPTB_RS02695 d67d2b4cbef4b2723c7a69b2454f9a00 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPTB_RS06545 b08926ea0389d5dd47ece9323527b134 334 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 58.227 T 22-04-2016 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 YPTB_RS06545 b08926ea0389d5dd47ece9323527b134 334 PANTHER PTHR30344:SF1 6 334 1.4E-105 T 22-04-2016 YPTB_RS06545 b08926ea0389d5dd47ece9323527b134 334 SUPERFAMILY SSF50974 5 291 5.1E-54 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal YPTB_RS06545 b08926ea0389d5dd47ece9323527b134 334 PANTHER PTHR30344 6 334 1.4E-105 T 22-04-2016 YPTB_RS06545 b08926ea0389d5dd47ece9323527b134 334 Gene3D G3DSA:2.130.10.10 2 327 2.8E-85 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPTB_RS06545 b08926ea0389d5dd47ece9323527b134 334 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 1.3E-93 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 YPTB_RS13235 334f3fc560f7e9a489fce60ff7dcf519 207 Pfam PF13505 Outer membrane protein beta-barrel domain 8 207 1.1E-10 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPTB_RS13235 334f3fc560f7e9a489fce60ff7dcf519 207 Gene3D G3DSA:2.40.160.20 9 207 5.2E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS13235 334f3fc560f7e9a489fce60ff7dcf519 207 SUPERFAMILY SSF56925 19 167 1.07E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 22-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 SUPERFAMILY SSF52091 453 563 1.12E-12 T 22-04-2016 IPR002645 STAS domain YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 PANTHER PTHR11814:SF112 6 564 5.8E-260 T 22-04-2016 YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 Pfam PF01740 STAS domain 456 558 2.6E-8 T 22-04-2016 IPR002645 STAS domain YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 TIGRFAM TIGR00815 sulP: sulfate permease 18 558 6.5E-131 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 PANTHER PTHR11814 6 564 5.8E-260 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 Pfam PF00916 Sulfate permease family 29 414 2.6E-81 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YPTB_RS11025 bfef616c97ec9d0bdc25d17637b95b2d 565 Gene3D G3DSA:3.30.750.24 457 563 4.6E-11 T 22-04-2016 IPR002645 STAS domain YPTB_RS02095 fd8752e9b4ff51c8cc27d9998f4a9db1 792 SUPERFAMILY SSF141729 30 139 2.09E-15 T 22-04-2016 YPTB_RS02095 fd8752e9b4ff51c8cc27d9998f4a9db1 792 PANTHER PTHR30451 1 792 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02095 fd8752e9b4ff51c8cc27d9998f4a9db1 792 Pfam PF00577 Outer membrane usher protein 177 704 6.9E-68 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS02095 fd8752e9b4ff51c8cc27d9998f4a9db1 792 Pfam PF13954 PapC N-terminal domain 33 159 1.5E-13 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS02095 fd8752e9b4ff51c8cc27d9998f4a9db1 792 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 284 294 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPTB_RS02095 fd8752e9b4ff51c8cc27d9998f4a9db1 792 Pfam PF13953 PapC C-terminal domain 713 776 8.2E-12 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS02095 fd8752e9b4ff51c8cc27d9998f4a9db1 792 PANTHER PTHR30451:SF8 1 792 0.0 T 22-04-2016 YPTB_RS17045 9d62e02fc2f878db17b2578e6172bc5c 388 Pfam PF10758 Protein of unknown function (DUF2586) 3 380 2.1E-156 T 22-04-2016 IPR019694 Bacteriophage HP1, Orf23 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 PANTHER PTHR24365 516 546 5.0E-12 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 PANTHER PTHR24365 46 302 5.0E-12 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SUPERFAMILY SSF52058 66 301 2.58E-31 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 Gene3D G3DSA:1.20.1270.130 322 402 1.1E-26 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 Gene3D G3DSA:1.20.58.360 404 540 3.1E-52 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 Pfam PF12468 Type III secretion system leucine rich repeat protein 1 59 4.0E-18 T 22-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 Gene3D G3DSA:1.20.58.90 543 618 7.8E-26 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 Gene3D G3DSA:3.80.10.10 71 146 1.6E-13 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 Gene3D G3DSA:3.80.10.10 147 293 5.8E-24 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 190 209 0.0018 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 211 230 0.36 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 170 189 8.5 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 107 126 1.1 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 84 106 25.0 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 232 251 1.4 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 128 147 0.01 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 SMART SM00364 253 272 1.4 T 22-04-2016 YPTB_RS17870 6b98899dbd7cbc8afd6c322764e10725 625 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 330 544 1.2E-72 T 22-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 SUPERFAMILY SSF56655 2 242 7.59E-73 T 22-04-2016 YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 Gene3D G3DSA:3.40.190.80 151 243 4.6E-40 T 22-04-2016 YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 Gene3D G3DSA:3.30.540.10 2 150 2.2E-43 T 22-04-2016 YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 PANTHER PTHR20854:SF5 1 243 1.2E-84 T 22-04-2016 YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 PANTHER PTHR20854 1 243 1.2E-84 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 Pfam PF00459 Inositol monophosphatase family 7 231 8.7E-48 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YPTB_RS02570 b31f15152bd9029f7d86bd1151b24f6f 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 4.8E-102 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 Pfam PF08345 Flagellar M-ring protein C-terminal 252 403 2.6E-35 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 15 538 3.7E-60 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 Pfam PF01514 Secretory protein of YscJ/FliF family 26 218 6.3E-58 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PRINTS PR01009 Flagellar M-ring protein signature 117 135 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PRINTS PR01009 Flagellar M-ring protein signature 149 163 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PRINTS PR01009 Flagellar M-ring protein signature 334 358 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PRINTS PR01009 Flagellar M-ring protein signature 193 211 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PRINTS PR01009 Flagellar M-ring protein signature 265 283 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PIRSF PIRSF004862 1 540 6.4E-109 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PANTHER PTHR30046:SF0 1 540 1.1E-106 T 22-04-2016 YPTB_RS18100 684d94818d7b2b149d194d5582647faa 546 PANTHER PTHR30046 1 540 1.1E-106 T 22-04-2016 YPTB_RS08995 eca189c194d2d1dbdafd73a1e618fedb 153 PIRSF PIRSF020687 1 152 1.8E-73 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPTB_RS08995 eca189c194d2d1dbdafd73a1e618fedb 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 2.0E-57 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPTB_RS08995 eca189c194d2d1dbdafd73a1e618fedb 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 33.576 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPTB_RS08995 eca189c194d2d1dbdafd73a1e618fedb 153 Pfam PF06173 Protein of unknown function (DUF986) 4 151 4.1E-66 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPTB_RS12980 a9e15fe3628862baa359e94cc437ecc4 329 PANTHER PTHR37089 1 329 5.4E-215 T 22-04-2016 YPTB_RS12980 a9e15fe3628862baa359e94cc437ecc4 329 Pfam PF05229 Spore Coat Protein U domain 37 171 7.1E-14 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS12980 a9e15fe3628862baa359e94cc437ecc4 329 Pfam PF05229 Spore Coat Protein U domain 196 325 2.2E-25 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS12980 a9e15fe3628862baa359e94cc437ecc4 329 PANTHER PTHR37089:SF1 1 329 5.4E-215 T 22-04-2016 YPTB_RS12980 a9e15fe3628862baa359e94cc437ecc4 329 SMART SM00972 271 326 3.5E-12 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS12980 a9e15fe3628862baa359e94cc437ecc4 329 SMART SM00972 104 172 1.1E-11 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS01445 19781d4174a80f5aa04856f9ba68b1e2 299 PANTHER PTHR22911:SF27 1 299 7.2E-94 T 22-04-2016 YPTB_RS01445 19781d4174a80f5aa04856f9ba68b1e2 299 PANTHER PTHR22911 1 299 7.2E-94 T 22-04-2016 YPTB_RS01445 19781d4174a80f5aa04856f9ba68b1e2 299 SUPERFAMILY SSF103481 35 131 8.5E-8 T 22-04-2016 YPTB_RS01445 19781d4174a80f5aa04856f9ba68b1e2 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 2.1E-83 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 YPTB_RS01445 19781d4174a80f5aa04856f9ba68b1e2 299 SUPERFAMILY SSF103481 196 276 1.07E-8 T 22-04-2016 YPTB_RS01445 19781d4174a80f5aa04856f9ba68b1e2 299 Pfam PF00892 EamA-like transporter family 1 129 4.2E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS01445 19781d4174a80f5aa04856f9ba68b1e2 299 Pfam PF00892 EamA-like transporter family 138 274 9.5E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 Pfam PF00210 Ferritin-like domain 8 143 2.3E-38 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PIRSF PIRSF002560 1 157 5.6E-70 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PANTHER PTHR30295 1 156 2.0E-53 T 22-04-2016 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.9E-79 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PANTHER PTHR30295:SF9 1 156 2.0E-53 T 22-04-2016 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 SUPERFAMILY SSF47240 1 153 6.3E-52 T 22-04-2016 IPR009078 Ferritin-like superfamily YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PRINTS PR00601 Bacterioferritin signature 107 127 1.9E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PRINTS PR00601 Bacterioferritin signature 23 43 1.9E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PRINTS PR00601 Bacterioferritin signature 3 22 1.9E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PRINTS PR00601 Bacterioferritin signature 65 85 1.9E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PRINTS PR00601 Bacterioferritin signature 44 64 1.9E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PRINTS PR00601 Bacterioferritin signature 86 106 1.9E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 PRINTS PR00601 Bacterioferritin signature 128 149 1.9E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPTB_RS20025 3f4b27c11e64f828796d7ec856bacde3 157 Gene3D G3DSA:1.20.1260.10 1 156 2.7E-63 T 22-04-2016 IPR012347 Ferritin-related YPTB_RS12195 2ee67b904335fd0083de1a4006d72078 184 SUPERFAMILY SSF81342 5 180 4.87E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPTB_RS12195 2ee67b904335fd0083de1a4006d72078 184 Pfam PF01292 Prokaryotic cytochrome b561 11 180 5.3E-25 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPTB_RS12195 2ee67b904335fd0083de1a4006d72078 184 PANTHER PTHR30529 3 184 4.3E-93 T 22-04-2016 YPTB_RS12195 2ee67b904335fd0083de1a4006d72078 184 Gene3D G3DSA:1.20.950.20 90 170 5.1E-5 T 22-04-2016 YPTB_RS12195 2ee67b904335fd0083de1a4006d72078 184 PANTHER PTHR30529:SF5 3 184 4.3E-93 T 22-04-2016 YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 Gene3D G3DSA:3.40.50.300 5 227 4.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 PANTHER PTHR24220:SF111 8 231 7.3E-132 T 22-04-2016 YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 SMART SM00382 35 230 6.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 PANTHER PTHR24220 8 231 7.3E-132 T 22-04-2016 YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 Pfam PF00005 ABC transporter 26 174 1.4E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 SUPERFAMILY SSF52540 6 226 7.48E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13275 4e678cc9f0e08174133ea2537369bc87 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 1.5E-109 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 YPTB_RS02025 37118ed60b146ce05fe41fbd24cae71f 266 Pfam PF02219 Methylenetetrahydrofolate reductase 4 265 4.2E-34 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YPTB_RS02025 37118ed60b146ce05fe41fbd24cae71f 266 Gene3D G3DSA:3.20.20.220 4 265 6.9E-41 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPTB_RS02025 37118ed60b146ce05fe41fbd24cae71f 266 SUPERFAMILY SSF51730 4 265 1.41E-49 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPTB_RS04475 11b6de934a80600fdb1a35e5ee4ff450 286 PANTHER PTHR38095:SF2 2 286 1.4E-163 T 22-04-2016 YPTB_RS04475 11b6de934a80600fdb1a35e5ee4ff450 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 3.5E-98 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 YPTB_RS04475 11b6de934a80600fdb1a35e5ee4ff450 286 PANTHER PTHR38095 2 286 1.4E-163 T 22-04-2016 YPTB_RS03975 51fc6a74d368285da16d71e6aca2e804 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 1.8E-161 T 22-04-2016 IPR031347 Protein AmpE YPTB_RS03975 51fc6a74d368285da16d71e6aca2e804 284 PANTHER PTHR38684 2 284 2.6E-111 T 22-04-2016 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 40.645 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 1.5E-87 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 196 5.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 Gene3D G3DSA:3.40.50.1000 1 222 1.7E-21 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 SUPERFAMILY SSF56784 1 222 6.65E-57 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 PANTHER PTHR20371 2 224 8.6E-86 T 22-04-2016 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 2.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 2.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS04870 148765621ce2f872c1d8c80e11a477b4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 2.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 SMART SM00342 181 264 5.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 PANTHER PTHR11019:SF120 1 272 1.1E-176 T 22-04-2016 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 Pfam PF12833 Helix-turn-helix domain 192 265 1.1E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 Pfam PF07883 Cupin domain 21 73 1.3E-6 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 Gene3D G3DSA:2.60.120.10 22 88 4.8E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 PANTHER PTHR11019 1 272 1.1E-176 T 22-04-2016 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 SUPERFAMILY SSF51182 5 86 6.45E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 SUPERFAMILY SSF46689 217 268 1.25E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 3.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 3.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPTB_RS15835 97ddc4f14d86b7b837cf137b415c11d9 276 Gene3D G3DSA:1.10.10.60 216 267 9.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS16895 2489a33297eebfa83fd9607ace4fdfba 108 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 16 103 3.0E-7 T 22-04-2016 IPR009241 Toxin HigB-like YPTB_RS10030 c14b9e0b07f06580b382f8dcd642314a 154 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 58 138 3.1E-16 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPTB_RS10030 c14b9e0b07f06580b382f8dcd642314a 154 PANTHER PTHR34413 7 141 2.3E-20 T 22-04-2016 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 PIRSF PIRSF006160 1 162 5.0E-67 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 2.0E-84 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 SUPERFAMILY SSF63411 4 162 1.19E-67 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.725 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 Gene3D G3DSA:3.30.1360.80 1 170 4.9E-76 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 PANTHER PTHR35799 2 169 1.1E-108 T 22-04-2016 YPTB_RS04610 a13cdff49cc1c2efd247d8f22a1b50f9 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 2.6E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPTB_RS13130 2608f8b608e62b1fc044d913a96e4b23 63 Pfam PF10781 Dextransucrase DSRB 1 60 9.0E-38 T 22-04-2016 IPR019717 Dextransucrase DSRB YPTB_RS13130 2608f8b608e62b1fc044d913a96e4b23 63 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.389 T 22-04-2016 IPR019717 Dextransucrase DSRB YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.612 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 Pfam PF00581 Rhodanese-like domain 138 233 2.9E-15 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 SMART SM00450 136 237 9.3E-27 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 Pfam PF12368 Rhodanase C-terminal 246 308 5.2E-19 T 22-04-2016 IPR022111 Rhodanase, C-terminal YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 Gene3D G3DSA:3.40.250.10 117 242 7.1E-37 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 PANTHER PTHR22778 1 322 1.6E-119 T 22-04-2016 YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 SUPERFAMILY SSF52821 128 268 6.96E-31 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS13515 8f59455028857041b2f900a023a85c2c 355 PANTHER PTHR22778:SF21 1 322 1.6E-119 T 22-04-2016 YPTB_RS06090 ce71427ebb695bc3377af38697cc35b8 224 PANTHER PTHR30614 1 222 7.1E-145 T 22-04-2016 YPTB_RS06090 ce71427ebb695bc3377af38697cc35b8 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.0E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06090 ce71427ebb695bc3377af38697cc35b8 224 SUPERFAMILY SSF161098 14 209 4.06E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06090 ce71427ebb695bc3377af38697cc35b8 224 PANTHER PTHR30614:SF1 1 222 7.1E-145 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 YPTB_RS06090 ce71427ebb695bc3377af38697cc35b8 224 Gene3D G3DSA:1.10.3720.10 13 222 4.0E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06090 ce71427ebb695bc3377af38697cc35b8 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.6E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS22150 0d84d3d7ddb7caf1c382e8351a63c400 178 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 88 169 8.3E-14 T 22-04-2016 IPR032032 Type VI secretion system (T6SS), amidase immunity protein YPTB_RS08420 72502283a690d3213c9657be2b51a228 393 PANTHER PTHR23546 1 392 1.6E-129 T 22-04-2016 YPTB_RS08420 72502283a690d3213c9657be2b51a228 393 PANTHER PTHR23546:SF1 1 392 1.6E-129 T 22-04-2016 YPTB_RS08420 72502283a690d3213c9657be2b51a228 393 Pfam PF07690 Major Facilitator Superfamily 11 352 9.8E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS08420 72502283a690d3213c9657be2b51a228 393 SUPERFAMILY SSF103473 11 389 1.57E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS08420 72502283a690d3213c9657be2b51a228 393 Gene3D G3DSA:1.20.1250.20 8 179 3.0E-26 T 22-04-2016 YPTB_RS08420 72502283a690d3213c9657be2b51a228 393 Gene3D G3DSA:1.20.1250.20 208 387 1.3E-15 T 22-04-2016 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 86 104 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 194 210 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 166 193 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 63 85 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 125 142 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 211 236 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 143 165 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 105 124 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 1.8E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 Pfam PF02108 Flagellar assembly protein FliH 106 229 2.3E-39 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PANTHER PTHR34982 30 232 9.6E-66 T 22-04-2016 YPTB_RS09355 805e118a8d8069f5cd5a4d31ca8dca2f 238 PANTHER PTHR34982:SF1 30 232 9.6E-66 T 22-04-2016 YPTB_RS16345 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953:SF159 10 165 4.1E-156 T 22-04-2016 YPTB_RS16345 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953:SF159 198 266 4.1E-156 T 22-04-2016 YPTB_RS16345 0a1b0c77d65c761398e6f507b11222af 275 Pfam PF00899 ThiF family 24 262 9.3E-39 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS16345 0a1b0c77d65c761398e6f507b11222af 275 Gene3D G3DSA:3.40.50.720 5 263 2.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS16345 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953 10 165 4.1E-156 T 22-04-2016 YPTB_RS16345 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953 198 266 4.1E-156 T 22-04-2016 YPTB_RS16345 0a1b0c77d65c761398e6f507b11222af 275 SUPERFAMILY SSF69572 6 259 1.15E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 3.1E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 PANTHER PTHR11751:SF421 1 111 4.1E-60 T 22-04-2016 YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 PANTHER PTHR11751 1 111 4.1E-60 T 22-04-2016 YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 SMART SM00895 95 219 2.1E-14 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 SUPERFAMILY SSF48008 93 226 1.05E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 Pfam PF07729 FCD domain 95 218 6.8E-17 T 22-04-2016 IPR011711 GntR, C-terminal YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 Gene3D G3DSA:1.10.10.10 3 79 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 SUPERFAMILY SSF46785 2 76 3.32E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 Gene3D G3DSA:1.20.120.530 95 227 4.7E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB_RS18840 9c2780183672ef386964a125930fc5a2 264 SMART SM00345 13 72 1.1E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 348 421 8.7E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 267 344 1.3E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 92 172 4.2E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 176 263 4.0E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 795 4.8E-282 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF01103 Surface antigen 448 795 6.1E-101 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 795 25.905 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:2.40.160.50 389 792 1.5E-23 T 22-04-2016 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 PIRSF PIRSF006076 1 795 9.6E-252 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 PANTHER PTHR12815 5 795 0.0 T 22-04-2016 YPTB_RS16215 f8b6c09000e8ed815ff56d6c04540b8a 795 PANTHER PTHR12815:SF11 5 795 0.0 T 22-04-2016 YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 Pfam PF03797 Autotransporter beta-domain 976 1238 4.6E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 809 1256 1.9E-78 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 Gene3D G3DSA:2.40.128.130 935 1256 7.2E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 SMART SM00869 977 1241 1.2E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 PANTHER PTHR35037:SF1 5 1256 0.0 T 22-04-2016 YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 PANTHER PTHR35037 5 1256 0.0 T 22-04-2016 YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 Gene3D G3DSA:2.160.20.20 314 934 8.4E-20 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 SUPERFAMILY SSF51126 403 922 8.79E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS17775 ab645937f626fe22567b82a859b433b6 1256 SUPERFAMILY SSF103515 939 1256 3.53E-39 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.052 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.40.50.300 88 204 1.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.40.50.300 3 17 1.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.40.50.300 18 40 1.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 SMART SM00072 3 187 4.6E-80 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 PANTHER PTHR23117 1 204 1.4E-104 T 22-04-2016 YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.30.63.10 41 87 2.5E-27 T 22-04-2016 YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 PANTHER PTHR23117:SF13 1 204 1.4E-104 T 22-04-2016 YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 Pfam PF00625 Guanylate kinase 5 186 1.4E-66 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 SUPERFAMILY SSF52540 3 189 1.58E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00285 f8c9725c5164bdd779e2b848a3f2c202 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.6E-74 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YPTB_RS01115 9753fdb340a3a7274af38807c4ad68b3 249 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.9E-44 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS01115 9753fdb340a3a7274af38807c4ad68b3 249 Gene3D G3DSA:3.40.50.10090 5 114 1.1E-10 T 22-04-2016 YPTB_RS01115 9753fdb340a3a7274af38807c4ad68b3 249 PANTHER PTHR38042:SF1 1 248 3.3E-91 T 22-04-2016 YPTB_RS01115 9753fdb340a3a7274af38807c4ad68b3 249 PANTHER PTHR38042 1 248 3.3E-91 T 22-04-2016 YPTB_RS01115 9753fdb340a3a7274af38807c4ad68b3 249 Gene3D G3DSA:3.40.50.10090 123 247 1.6E-10 T 22-04-2016 YPTB_RS01115 9753fdb340a3a7274af38807c4ad68b3 249 SUPERFAMILY SSF69618 1 247 2.22E-56 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPTB_RS06210 9bf3af70a253db04ea1e88ab5f536a99 473 Pfam PF03573 outer membrane porin, OprD family 39 442 2.8E-22 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 YPTB_RS06210 9bf3af70a253db04ea1e88ab5f536a99 473 Gene3D G3DSA:2.40.160.10 44 473 4.5E-51 T 22-04-2016 IPR023614 Porin domain YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 SMART SM00382 28 211 1.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 PANTHER PTHR24220:SF448 306 351 3.1E-178 T 22-04-2016 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 PANTHER PTHR24220:SF448 5 274 3.1E-178 T 22-04-2016 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 Gene3D G3DSA:3.40.50.300 4 241 6.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 Pfam PF08402 TOBE domain 288 359 1.2E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 Gene3D G3DSA:2.40.50.100 353 367 9.3E-14 T 22-04-2016 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 Gene3D G3DSA:2.40.50.100 246 292 9.3E-14 T 22-04-2016 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 PANTHER PTHR24220 306 351 3.1E-178 T 22-04-2016 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 PANTHER PTHR24220 5 274 3.1E-178 T 22-04-2016 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 Pfam PF00005 ABC transporter 20 161 9.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 Gene3D G3DSA:2.40.50.140 293 350 1.1E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 SUPERFAMILY SSF52540 4 249 1.08E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10515 93adf35993398ad59a866590a5a8331c 380 SUPERFAMILY SSF50331 243 363 3.19E-27 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS09575 6b196ab50dfbac58ff0e4f4d03735fde 388 Pfam PF05954 Phage late control gene D protein (GPD) 71 367 1.1E-31 T 22-04-2016 YPTB_RS09575 6b196ab50dfbac58ff0e4f4d03735fde 388 SUPERFAMILY SSF69279 15 188 6.8E-26 T 22-04-2016 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 665 9.0E-278 T 22-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216 462 647 0.0 T 22-04-2016 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216 1 308 0.0 T 22-04-2016 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 645 4.4E-148 T 22-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 Pfam PF01522 Polysaccharide deacetylase 103 270 6.3E-31 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 SUPERFAMILY SSF88713 66 196 2.25E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 SUPERFAMILY SSF88713 224 290 2.25E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 Gene3D G3DSA:3.20.20.370 77 270 1.1E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 Gene3D G3DSA:3.20.20.370 423 489 1.1E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216:SF2 462 647 0.0 T 22-04-2016 YPTB_RS10700 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216:SF2 1 308 0.0 T 22-04-2016 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 SUPERFAMILY SSF48208 3 358 2.67E-99 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 Pfam PF01270 Glycosyl hydrolases family 8 11 353 4.6E-86 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 Gene3D G3DSA:1.50.10.10 8 361 1.4E-87 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 1.7E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 1.7E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 338 352 1.7E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 1.7E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YPTB_RS20740 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 1.7E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YPTB_RS02835 c5baf972695e1346e599d62f15eb46e6 173 PANTHER PTHR10094:SF16 1 144 1.2E-74 T 22-04-2016 YPTB_RS02835 c5baf972695e1346e599d62f15eb46e6 173 Pfam PF02036 SCP-2 sterol transfer family 46 133 1.8E-19 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPTB_RS02835 c5baf972695e1346e599d62f15eb46e6 173 PIRSF PIRSF025550 1 173 9.2E-83 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YPTB_RS02835 c5baf972695e1346e599d62f15eb46e6 173 Gene3D G3DSA:3.30.1050.10 58 135 3.7E-13 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPTB_RS02835 c5baf972695e1346e599d62f15eb46e6 173 PANTHER PTHR10094 1 144 1.2E-74 T 22-04-2016 YPTB_RS02835 c5baf972695e1346e599d62f15eb46e6 173 SUPERFAMILY SSF55718 42 137 1.79E-23 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPTB_RS00160 8e577314f6a4b544650cf0030977bed2 176 PANTHER PTHR19136 3 143 1.1E-41 T 22-04-2016 YPTB_RS00160 8e577314f6a4b544650cf0030977bed2 176 SUPERFAMILY SSF52540 6 168 1.17E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS00160 8e577314f6a4b544650cf0030977bed2 176 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 3.1E-43 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YPTB_RS00160 8e577314f6a4b544650cf0030977bed2 176 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 2.9E-47 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YPTB_RS00160 8e577314f6a4b544650cf0030977bed2 176 PANTHER PTHR19136:SF82 3 143 1.1E-41 T 22-04-2016 YPTB_RS00160 8e577314f6a4b544650cf0030977bed2 176 Gene3D G3DSA:3.40.50.300 6 169 2.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05545 338b1cf38c714a30263d1bacc0a6dad2 224 Gene3D G3DSA:3.90.550.10 16 222 5.3E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS05545 338b1cf38c714a30263d1bacc0a6dad2 224 SUPERFAMILY SSF53448 17 222 1.5E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS05545 338b1cf38c714a30263d1bacc0a6dad2 224 PANTHER PTHR22916 181 224 6.1E-16 T 22-04-2016 YPTB_RS05545 338b1cf38c714a30263d1bacc0a6dad2 224 PANTHER PTHR22916 3 159 6.1E-16 T 22-04-2016 YPTB_RS05545 338b1cf38c714a30263d1bacc0a6dad2 224 Pfam PF00535 Glycosyl transferase family 2 18 125 2.1E-13 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPTB_RS04535 fc022eee6c593136f2be6512906f9a05 474 PANTHER PTHR36120 5 474 1.2E-260 T 22-04-2016 YPTB_RS04535 fc022eee6c593136f2be6512906f9a05 474 SUPERFAMILY SSF53743 6 325 2.88E-65 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 YPTB_RS04535 fc022eee6c593136f2be6512906f9a05 474 Pfam PF02952 L-fucose isomerase, C-terminal domain 343 471 1.9E-37 T 22-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 YPTB_RS04535 fc022eee6c593136f2be6512906f9a05 474 PANTHER PTHR36120:SF1 5 474 1.2E-260 T 22-04-2016 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 Gene3D G3DSA:3.40.1190.20 2 305 7.0E-77 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 Pfam PF00294 pfkB family carbohydrate kinase 3 282 3.0E-51 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 PANTHER PTHR10584:SF166 1 304 5.0E-86 T 22-04-2016 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 SUPERFAMILY SSF53613 1 301 3.74E-73 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 PRINTS PR00990 Ribokinase signature 32 51 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 PRINTS PR00990 Ribokinase signature 216 227 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 PRINTS PR00990 Ribokinase signature 172 187 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 PRINTS PR00990 Ribokinase signature 5 26 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 PRINTS PR00990 Ribokinase signature 104 117 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 PANTHER PTHR10584 1 304 5.0E-86 T 22-04-2016 YPTB_RS19510 527dc77ea2c7ebe2b3eb5a770924363f 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPTB_RS18430 a868bf7e31aff251648b6f4f3cb87080 435 SUPERFAMILY SSF55154 1 218 1.8E-55 T 22-04-2016 IPR033469 CYTH-like domain YPTB_RS18430 a868bf7e31aff251648b6f4f3cb87080 435 PANTHER PTHR39569 2 435 8.0E-157 T 22-04-2016 YPTB_RS18430 a868bf7e31aff251648b6f4f3cb87080 435 SMART SM01118 2 202 9.8E-42 T 22-04-2016 IPR023577 CYTH domain YPTB_RS18430 a868bf7e31aff251648b6f4f3cb87080 435 Pfam PF01928 CYTH domain 4 196 3.6E-30 T 22-04-2016 IPR023577 CYTH domain YPTB_RS18430 a868bf7e31aff251648b6f4f3cb87080 435 Gene3D G3DSA:2.40.320.10 1 209 1.6E-39 T 22-04-2016 IPR023577 CYTH domain YPTB_RS18430 a868bf7e31aff251648b6f4f3cb87080 435 PANTHER PTHR39569:SF1 2 435 8.0E-157 T 22-04-2016 YPTB_RS20080 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.847 T 22-04-2016 IPR007236 SlyX YPTB_RS20080 8a3fc129b7a4b7506ef3a982cb5c6baa 72 PANTHER PTHR36508 1 72 7.0E-27 T 22-04-2016 YPTB_RS20080 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Gene3D G3DSA:1.20.5.300 2 52 1.1E-19 T 22-04-2016 YPTB_RS20080 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Pfam PF04102 SlyX 6 72 4.5E-24 T 22-04-2016 IPR007236 SlyX YPTB_RS07490 02c981d94be7babfc80a4e724370469d 201 Pfam PF01569 PAP2 superfamily 65 168 3.3E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07490 02c981d94be7babfc80a4e724370469d 201 Gene3D G3DSA:1.20.144.10 8 171 1.0E-21 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07490 02c981d94be7babfc80a4e724370469d 201 PANTHER PTHR14969:SF20 2 196 2.2E-67 T 22-04-2016 YPTB_RS07490 02c981d94be7babfc80a4e724370469d 201 SUPERFAMILY SSF48317 1 199 5.23E-39 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07490 02c981d94be7babfc80a4e724370469d 201 SMART SM00014 59 168 6.9E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07490 02c981d94be7babfc80a4e724370469d 201 PANTHER PTHR14969 2 196 2.2E-67 T 22-04-2016 YPTB_RS18290 c20acde2eb5dbe0365a3e3ef318bf705 220 PANTHER PTHR30353 1 216 1.2E-169 T 22-04-2016 IPR032818 DedA family YPTB_RS18290 c20acde2eb5dbe0365a3e3ef318bf705 220 Pfam PF09335 SNARE associated Golgi protein 48 172 2.0E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPTB_RS18290 c20acde2eb5dbe0365a3e3ef318bf705 220 PANTHER PTHR30353:SF10 1 216 1.2E-169 T 22-04-2016 YPTB_RS13605 503749e44560208ed969bc183918358c 339 Pfam PF00248 Aldo/keto reductase family 15 309 3.2E-66 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS13605 503749e44560208ed969bc183918358c 339 PANTHER PTHR11732 1 339 3.8E-199 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPTB_RS13605 503749e44560208ed969bc183918358c 339 Gene3D G3DSA:3.20.20.100 1 309 2.6E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS13605 503749e44560208ed969bc183918358c 339 PANTHER PTHR11732:SF273 1 339 3.8E-199 T 22-04-2016 YPTB_RS13605 503749e44560208ed969bc183918358c 339 SUPERFAMILY SSF51430 1 313 9.17E-93 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 17 440 8.77E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 PANTHER PTHR11773:SF1 1 959 0.0 T 22-04-2016 YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.392 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 479 889 3.25E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 PANTHER PTHR11773 1 959 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 Pfam PF02347 Glycine cleavage system P-protein 477 739 1.2E-8 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 Pfam PF02347 Glycine cleavage system P-protein 16 440 5.9E-179 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 931 953 3.25E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 Gene3D G3DSA:3.40.640.10 93 305 1.1E-13 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS17230 547a8be9b36feee1f8d87c42c71af5b6 959 Gene3D G3DSA:3.40.640.10 504 778 5.3E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 192 2.0E-74 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 PANTHER PTHR30046:SF3 4 239 7.2E-165 T 22-04-2016 YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 Pfam PF01514 Secretory protein of YscJ/FliF family 7 191 1.3E-28 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YPTB_RS01895 28390107213d670be2816eab32bb42c4 243 PANTHER PTHR30046 4 239 7.2E-165 T 22-04-2016 YPTB_RS15490 19aa07843e2abf335da02c0ae94c896b 224 Pfam PF06226 Protein of unknown function (DUF1007) 22 223 5.6E-63 T 22-04-2016 IPR010412 Protein of unknown function DUF1007 YPTB_RS15490 19aa07843e2abf335da02c0ae94c896b 224 PIRSF PIRSF008159 7 224 4.2E-75 T 22-04-2016 IPR016537 Uncharacterised conserved protein UCP008159, YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 Pfam PF13353 4Fe-4S single cluster domain 11 117 6.6E-5 T 22-04-2016 YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 2 363 7.8E-150 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 264 344 1.4E-17 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 Gene3D G3DSA:3.20.20.70 9 333 3.4E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 SUPERFAMILY SSF102114 9 327 8.5E-48 T 22-04-2016 YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 158 378 1.0E-14 T 22-04-2016 YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 Pfam PF04055 Radical SAM superfamily 10 172 2.2E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 PANTHER PTHR11228 1 354 8.3E-111 T 22-04-2016 YPTB_RS15000 3ee3d10c8961f1d7cf7bc9d8ce95fed5 391 PANTHER PTHR11228:SF7 1 354 8.3E-111 T 22-04-2016 YPTB_RS16750 5e9ccd7e2bbd740b9690b1c3424aad9a 103 PANTHER PTHR30009:SF2 21 98 2.3E-24 T 22-04-2016 YPTB_RS16750 5e9ccd7e2bbd740b9690b1c3424aad9a 103 PANTHER PTHR30009 21 98 2.3E-24 T 22-04-2016 YPTB_RS16750 5e9ccd7e2bbd740b9690b1c3424aad9a 103 Gene3D G3DSA:3.30.1360.60 23 98 9.5E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS16750 5e9ccd7e2bbd740b9690b1c3424aad9a 103 SUPERFAMILY SSF55604 27 98 6.02E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS16750 5e9ccd7e2bbd740b9690b1c3424aad9a 103 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 40 57 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS16750 5e9ccd7e2bbd740b9690b1c3424aad9a 103 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 23 86 5.2E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPTB_RS16750 5e9ccd7e2bbd740b9690b1c3424aad9a 103 Pfam PF00367 phosphotransferase system, EIIB 31 62 3.5E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPTB_RS04485 6ac6d345cce541b983bb3a08216620e0 176 PANTHER PTHR30529 1 176 2.6E-144 T 22-04-2016 YPTB_RS04485 6ac6d345cce541b983bb3a08216620e0 176 PANTHER PTHR30529:SF4 1 176 2.6E-144 T 22-04-2016 YPTB_RS04485 6ac6d345cce541b983bb3a08216620e0 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 2.8E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPTB_RS04485 6ac6d345cce541b983bb3a08216620e0 176 SUPERFAMILY SSF81342 3 172 3.45E-25 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPTB_RS20285 42ca57c9a31d44b90ef4811d0ba72178 119 Pfam PF10748 Protein of unknown function (DUF2531) 26 98 3.4E-6 T 22-04-2016 IPR019684 Protein of unknown function DUF2531 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 SUPERFAMILY SSF51569 1 291 1.43E-100 T 22-04-2016 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 PANTHER PTHR10277:SF9 1 508 1.1E-269 T 22-04-2016 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 Gene3D G3DSA:3.20.20.70 1 347 9.2E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.408 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 Pfam PF00682 HMGL-like 4 273 1.4E-105 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 7.1E-37 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 SMART SM00917 369 500 2.0E-38 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 7.0E-252 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 SUPERFAMILY SSF110921 392 499 6.67E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 PANTHER PTHR10277 1 508 1.1E-269 T 22-04-2016 YPTB_RS03755 3bcf9ae13a6e102280e48b5b71576fa0 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPTB_RS04050 c811d7e3742f4698797e94d902cbb144 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS04050 c811d7e3742f4698797e94d902cbb144 308 Pfam PF00005 ABC transporter 21 165 1.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS04050 c811d7e3742f4698797e94d902cbb144 308 SUPERFAMILY SSF52540 3 234 1.63E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04050 c811d7e3742f4698797e94d902cbb144 308 PANTHER PTHR24220:SF305 6 301 2.3E-186 T 22-04-2016 YPTB_RS04050 c811d7e3742f4698797e94d902cbb144 308 SMART SM00382 30 213 1.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04050 c811d7e3742f4698797e94d902cbb144 308 Gene3D G3DSA:3.40.50.300 3 228 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04050 c811d7e3742f4698797e94d902cbb144 308 PANTHER PTHR24220 6 301 2.3E-186 T 22-04-2016 YPTB_RS19030 04ef9042f43a0fee95eb20210ee798f3 100 PANTHER PTHR35849:SF1 1 99 1.3E-39 T 22-04-2016 YPTB_RS19030 04ef9042f43a0fee95eb20210ee798f3 100 Pfam PF13466 STAS domain 14 91 8.5E-19 T 22-04-2016 IPR002645 STAS domain YPTB_RS19030 04ef9042f43a0fee95eb20210ee798f3 100 PANTHER PTHR35849 1 99 1.3E-39 T 22-04-2016 YPTB_RS19030 04ef9042f43a0fee95eb20210ee798f3 100 Gene3D G3DSA:3.30.750.24 13 98 6.3E-15 T 22-04-2016 IPR002645 STAS domain YPTB_RS19030 04ef9042f43a0fee95eb20210ee798f3 100 SUPERFAMILY SSF52091 13 96 1.04E-16 T 22-04-2016 IPR002645 STAS domain YPTB_RS21260 9a6cf7f920fb4442b48f508c237e1c06 409 PANTHER PTHR23502:SF43 13 404 0.0 T 22-04-2016 YPTB_RS21260 9a6cf7f920fb4442b48f508c237e1c06 409 Pfam PF07690 Major Facilitator Superfamily 25 364 1.9E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS21260 9a6cf7f920fb4442b48f508c237e1c06 409 SUPERFAMILY SSF103473 7 401 3.14E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS21260 9a6cf7f920fb4442b48f508c237e1c06 409 Gene3D G3DSA:1.20.1250.20 22 197 4.4E-24 T 22-04-2016 YPTB_RS21260 9a6cf7f920fb4442b48f508c237e1c06 409 PANTHER PTHR23502 13 404 0.0 T 22-04-2016 YPTB_RS14700 78446c0bd2c148ec8aa68cd5dfe374bd 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 6.0E-25 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor YPTB_RS14700 78446c0bd2c148ec8aa68cd5dfe374bd 71 PANTHER PTHR40613:SF1 1 69 6.2E-38 T 22-04-2016 YPTB_RS14700 78446c0bd2c148ec8aa68cd5dfe374bd 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.1E-31 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor YPTB_RS14700 78446c0bd2c148ec8aa68cd5dfe374bd 71 PANTHER PTHR40613 1 69 6.2E-38 T 22-04-2016 YPTB_RS13485 b55fa417400f894776178115b8a3742b 81 Pfam PF06183 DinI-like family 14 78 2.0E-29 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPTB_RS13485 b55fa417400f894776178115b8a3742b 81 Gene3D G3DSA:3.30.910.10 1 79 1.1E-33 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPTB_RS13485 b55fa417400f894776178115b8a3742b 81 PANTHER PTHR36572 1 81 1.0E-45 T 22-04-2016 YPTB_RS13485 b55fa417400f894776178115b8a3742b 81 SUPERFAMILY SSF54857 1 80 1.01E-29 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPTB_RS13485 b55fa417400f894776178115b8a3742b 81 PANTHER PTHR36572:SF2 1 81 1.0E-45 T 22-04-2016 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.049 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 PANTHER PTHR33695 9 169 9.6E-64 T 22-04-2016 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 Pfam PF01252 Signal peptidase (SPase) II 16 154 4.1E-36 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.6E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.6E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.6E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 PANTHER PTHR33695:SF1 9 169 9.6E-64 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS03480 864cfccf212ab4a1d71b979a3aae1660 169 TIGRFAM TIGR00077 lspA: signal peptidase II 3 160 7.3E-51 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPTB_RS07475 6a9bf7a5e7dbd0d645acd968a7316311 433 PANTHER PTHR35334 1 430 0.0 T 22-04-2016 YPTB_RS07475 6a9bf7a5e7dbd0d645acd968a7316311 433 TIGRFAM TIGR00814 stp: serine transporter 20 419 5.7E-179 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 YPTB_RS07475 6a9bf7a5e7dbd0d645acd968a7316311 433 Pfam PF03222 Tryptophan/tyrosine permease family 32 356 4.7E-10 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YPTB_RS07475 6a9bf7a5e7dbd0d645acd968a7316311 433 PANTHER PTHR35334:SF2 1 430 0.0 T 22-04-2016 YPTB_RS09210 45b7ae7312658bc95de91bf697f30e79 137 PANTHER PTHR30435 2 135 1.4E-54 T 22-04-2016 YPTB_RS09210 45b7ae7312658bc95de91bf697f30e79 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS09210 45b7ae7312658bc95de91bf697f30e79 137 Pfam PF00460 Flagella basal body rod protein 9 39 3.0E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS09210 45b7ae7312658bc95de91bf697f30e79 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 4.8E-42 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPTB_RS09210 45b7ae7312658bc95de91bf697f30e79 137 PIRSF PIRSF002889 1 137 4.0E-41 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPTB_RS09210 45b7ae7312658bc95de91bf697f30e79 137 PANTHER PTHR30435:SF12 2 135 1.4E-54 T 22-04-2016 YPTB_RS02980 b8f52370fa58f47fc99c246f155453d5 522 SUPERFAMILY SSF53850 21 517 3.44E-97 T 22-04-2016 YPTB_RS02980 b8f52370fa58f47fc99c246f155453d5 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 440 1.5E-63 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPTB_RS02980 b8f52370fa58f47fc99c246f155453d5 522 PANTHER PTHR30290 24 518 8.9E-86 T 22-04-2016 YPTB_RS02980 b8f52370fa58f47fc99c246f155453d5 522 Gene3D G3DSA:3.10.105.10 296 490 1.2E-33 T 22-04-2016 YPTB_RS02980 b8f52370fa58f47fc99c246f155453d5 522 Gene3D G3DSA:3.40.190.10 140 295 5.2E-30 T 22-04-2016 YPTB_RS02980 b8f52370fa58f47fc99c246f155453d5 522 PIRSF PIRSF002741 11 519 1.6E-61 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.30.190.20 161 225 2.8E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.30.190.20 18 68 2.8E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.40.50.790 69 159 1.9E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 PANTHER PTHR23105:SF5 21 229 2.1E-82 T 22-04-2016 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 SUPERFAMILY SSF56808 6 225 1.83E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 PIRSF PIRSF002155 1 227 4.9E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 PANTHER PTHR23105 21 229 2.1E-82 T 22-04-2016 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.3E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 6.5E-107 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.367 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YPTB_RS01665 8938e3e805f49d50d98e34fe67ae0752 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 36 269 1.3E-65 T 22-04-2016 YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PANTHER PTHR24321 25 270 4.3E-59 T 22-04-2016 YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PANTHER PTHR24321:SF6 25 270 4.3E-59 T 22-04-2016 YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 Gene3D G3DSA:3.40.50.720 25 269 4.7E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 163 191 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 232 252 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 SUPERFAMILY SSF51735 26 269 2.55E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 5.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 5.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07300 54453c5f6a14ae1964670108d516f9dd 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 195 5.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS07110 b60b5cadc21f07235611b6920651eccf 378 Pfam PF04865 Baseplate J-like protein 66 340 1.3E-84 T 22-04-2016 IPR006949 Baseplate protein J-like YPTB_RS07110 b60b5cadc21f07235611b6920651eccf 378 PANTHER PTHR37829 2 378 5.1E-114 T 22-04-2016 YPTB_RS21365 57a1c11d3b798748d2e5787564dac035 223 PANTHER PTHR35024:SF2 2 216 1.7E-112 T 22-04-2016 YPTB_RS21365 57a1c11d3b798748d2e5787564dac035 223 PANTHER PTHR35024 2 216 1.7E-112 T 22-04-2016 YPTB_RS21365 57a1c11d3b798748d2e5787564dac035 223 Pfam PF04519 Polymer-forming cytoskeletal 87 183 1.3E-17 T 22-04-2016 IPR007607 Protein of unknown function DUF583 YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 Pfam PF00825 Ribonuclease P 6 111 2.7E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 98 3.0E-42 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 SUPERFAMILY SSF54211 5 114 9.36E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 114 6.3E-36 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 Gene3D G3DSA:3.30.230.10 5 115 5.4E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.542 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPTB_RS21310 510914fba22b3ad18df9553c6e8ea155 119 PANTHER PTHR33992 2 119 2.2E-44 T 22-04-2016 YPTB_RS06855 d46798700a74102c12a4e39407998a8e 278 Gene3D G3DSA:1.10.3720.10 33 267 9.4E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06855 d46798700a74102c12a4e39407998a8e 278 SUPERFAMILY SSF161098 69 259 6.67E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06855 d46798700a74102c12a4e39407998a8e 278 PANTHER PTHR30177 1 278 1.4E-192 T 22-04-2016 YPTB_RS06855 d46798700a74102c12a4e39407998a8e 278 PANTHER PTHR30177:SF11 1 278 1.4E-192 T 22-04-2016 YPTB_RS06855 d46798700a74102c12a4e39407998a8e 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 265 5.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07030 74dbf3d4031d85a9f27a3d4181a8460d 434 SUPERFAMILY SSF142764 5 431 4.32E-122 T 22-04-2016 YPTB_RS07030 74dbf3d4031d85a9f27a3d4181a8460d 434 Pfam PF07005 Putative sugar-binding N-terminal domain 5 233 4.9E-65 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain YPTB_RS07030 74dbf3d4031d85a9f27a3d4181a8460d 434 PANTHER PTHR30304:SF3 126 434 3.9E-155 T 22-04-2016 YPTB_RS07030 74dbf3d4031d85a9f27a3d4181a8460d 434 PANTHER PTHR30304 126 434 3.9E-155 T 22-04-2016 YPTB_RS07030 74dbf3d4031d85a9f27a3d4181a8460d 434 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 269 426 1.4E-40 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain YPTB_RS02040 9ff2065f652337578ec23a3e533f8915 359 Pfam PF15608 PELOTA RNA binding domain 276 357 7.0E-29 T 22-04-2016 IPR028157 PELOTA RNA-binding domain KEGG: 00900+3.4.22.- YPTB_RS02040 9ff2065f652337578ec23a3e533f8915 359 PIRSF PIRSF020979 1 359 5.6E-197 T 22-04-2016 IPR011215 Phosphoribosyl transferase KEGG: 00900+3.4.22.- YPTB_RS02040 9ff2065f652337578ec23a3e533f8915 359 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 248 1.1E-90 T 22-04-2016 IPR011215 Phosphoribosyl transferase KEGG: 00900+3.4.22.- YPTB_RS12780 26fd68ff51b191d93a0a40c17edef47c 220 Pfam PF01464 Transglycosylase SLT domain 57 182 5.7E-29 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPTB_RS12780 26fd68ff51b191d93a0a40c17edef47c 220 Gene3D G3DSA:1.10.530.10 53 218 1.7E-33 T 22-04-2016 YPTB_RS12780 26fd68ff51b191d93a0a40c17edef47c 220 PANTHER PTHR21666:SF216 51 220 4.3E-112 T 22-04-2016 YPTB_RS12780 26fd68ff51b191d93a0a40c17edef47c 220 SUPERFAMILY SSF53955 53 217 1.66E-29 T 22-04-2016 IPR023346 Lysozyme-like domain YPTB_RS12780 26fd68ff51b191d93a0a40c17edef47c 220 PANTHER PTHR21666 51 220 4.3E-112 T 22-04-2016 YPTB_RS12780 26fd68ff51b191d93a0a40c17edef47c 220 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 75 103 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 Gene3D G3DSA:3.40.50.720 2 247 2.3E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 246 6.5E-62 T 22-04-2016 YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PANTHER PTHR24322 7 136 1.9E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PANTHER PTHR24322 152 184 1.9E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS08110 6ba3fcce45a676dbac875e038805e275 248 SUPERFAMILY SSF51735 2 247 3.04E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 Pfam PF00771 FHIPEP family 27 689 1.1E-232 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PIRSF PIRSF005419 2 698 1.0E-216 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PANTHER PTHR30161 1 698 9.2E-304 T 22-04-2016 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PANTHER PTHR30161:SF1 1 698 9.2E-304 T 22-04-2016 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 8.6E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 8.6E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 8.6E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 8.6E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 8.6E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 8.6E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPTB_RS18145 33efc6d61b7f31e49c4c7c051f75c95f 698 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 22-04-2016 IPR025505 FHIPEP conserved site YPTB_RS15710 770e65b99a96b0442c8998b6fdf2dee8 243 PANTHER PTHR41293:SF1 2 243 7.2E-126 T 22-04-2016 YPTB_RS15710 770e65b99a96b0442c8998b6fdf2dee8 243 PANTHER PTHR41293 2 243 7.2E-126 T 22-04-2016 YPTB_RS15710 770e65b99a96b0442c8998b6fdf2dee8 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 3.0E-88 T 22-04-2016 IPR010374 Protein of unknown function DUF969 YPTB_RS14430 9cf17c377058cc9cbfd0b36b3abe84a4 179 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 22 145 1.1E-31 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS14430 9cf17c377058cc9cbfd0b36b3abe84a4 179 PANTHER PTHR37625:SF2 5 166 1.1E-84 T 22-04-2016 YPTB_RS14430 9cf17c377058cc9cbfd0b36b3abe84a4 179 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 152 8.7E-44 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS14430 9cf17c377058cc9cbfd0b36b3abe84a4 179 PANTHER PTHR37625 5 166 1.1E-84 T 22-04-2016 YPTB_RS11245 3ca980ec9a353b8effa068451d59cb15 147 Pfam PF00893 Small Multidrug Resistance protein 3 93 1.5E-22 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPTB_RS11245 3ca980ec9a353b8effa068451d59cb15 147 SUPERFAMILY SSF103481 6 107 1.44E-16 T 22-04-2016 YPTB_RS11245 3ca980ec9a353b8effa068451d59cb15 147 PANTHER PTHR30561:SF2 1 111 2.7E-77 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 YPTB_RS11245 3ca980ec9a353b8effa068451d59cb15 147 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 147 32.372 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 YPTB_RS11245 3ca980ec9a353b8effa068451d59cb15 147 PANTHER PTHR30561 1 111 2.7E-77 T 22-04-2016 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 Pfam PF02119 Flagellar P-ring protein 25 368 2.3E-134 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PANTHER PTHR30381:SF1 1 369 1.1E-239 T 22-04-2016 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PANTHER PTHR30381 1 369 1.1E-239 T 22-04-2016 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 40 55 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 25 40 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 165 183 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 191 209 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 255 267 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 60 75 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09245 ac71fe9f4fc19cff72639c663339ed6c 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 369 38.471 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS15575 026cb53b73c64ce681901d3633605dea 200 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 42 183 47.484 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 YPTB_RS15575 026cb53b73c64ce681901d3633605dea 200 SUPERFAMILY SSF53927 34 187 4.68E-56 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPTB_RS15575 026cb53b73c64ce681901d3633605dea 200 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 87 124 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YPTB_RS15575 026cb53b73c64ce681901d3633605dea 200 Pfam PF14437 MafB19-like deaminase 38 183 1.9E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 YPTB_RS15575 026cb53b73c64ce681901d3633605dea 200 PANTHER PTHR11079 38 185 1.3E-48 T 22-04-2016 YPTB_RS15575 026cb53b73c64ce681901d3633605dea 200 Gene3D G3DSA:3.40.140.10 33 182 3.2E-58 T 22-04-2016 YPTB_RS09070 98895e449c1d7d6e84e03baf6ac73c2c 165 SUPERFAMILY SSF50475 11 162 5.89E-44 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS09070 98895e449c1d7d6e84e03baf6ac73c2c 165 Gene3D G3DSA:2.30.110.10 11 163 1.3E-45 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS09070 98895e449c1d7d6e84e03baf6ac73c2c 165 PANTHER PTHR30466:SF2 1 164 1.7E-83 T 22-04-2016 YPTB_RS09070 98895e449c1d7d6e84e03baf6ac73c2c 165 SMART SM00903 15 162 3.7E-49 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YPTB_RS09070 98895e449c1d7d6e84e03baf6ac73c2c 165 Pfam PF01613 Flavin reductase like domain 15 163 2.9E-24 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YPTB_RS09070 98895e449c1d7d6e84e03baf6ac73c2c 165 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 164 1.1E-75 T 22-04-2016 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 UniPathway: UPA00208 YPTB_RS09070 98895e449c1d7d6e84e03baf6ac73c2c 165 PANTHER PTHR30466 1 164 1.7E-83 T 22-04-2016 YPTB_RS07060 568c095c349f1cd8ee0f5c744167b43c 64 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 1 42 1.0E-18 T 22-04-2016 IPR024400 Protein of unknown function DUF2635 YPTB_RS07060 568c095c349f1cd8ee0f5c744167b43c 64 Pfam PF10948 Protein of unknown function (DUF2635) 3 47 1.6E-22 T 22-04-2016 IPR024400 Protein of unknown function DUF2635 YPTB_RS16410 4a453af15485f010da579c7d4fecad4d 202 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS16410 4a453af15485f010da579c7d4fecad4d 202 PIRSF PIRSF004525 6 202 2.9E-74 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted YPTB_RS16410 4a453af15485f010da579c7d4fecad4d 202 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 39 0.0013 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS10620 da587c1e53b3a011a6ab4d0d6877d134 509 Pfam PF00324 Amino acid permease 34 472 3.2E-121 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS10620 da587c1e53b3a011a6ab4d0d6877d134 509 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS10620 da587c1e53b3a011a6ab4d0d6877d134 509 PANTHER PTHR11785 1 506 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS10620 da587c1e53b3a011a6ab4d0d6877d134 509 PANTHER PTHR11785:SF25 1 506 0.0 T 22-04-2016 YPTB_RS10620 da587c1e53b3a011a6ab4d0d6877d134 509 PIRSF PIRSF006060 20 484 9.8E-63 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 Pfam PF00005 ABC transporter 18 157 3.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 PANTHER PTHR24220 3 188 1.7E-105 T 22-04-2016 YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 200 5.9E-80 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 Gene3D G3DSA:3.40.50.300 1 188 5.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 SUPERFAMILY SSF52540 2 188 3.89E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 PANTHER PTHR24220:SF508 3 188 1.7E-105 T 22-04-2016 YPTB_RS14355 2f013ba2f631c083a8737d09c50feccc 218 SMART SM00382 26 207 5.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 PANTHER PTHR30531 1 358 1.8E-100 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 PANTHER PTHR30531:SF0 1 358 1.8E-100 T 22-04-2016 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 SUPERFAMILY SSF160544 248 352 5.62E-37 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 351 4.3E-107 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 344 4.3E-109 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPTB_RS18140 a57944d6a1f83cc82ebd7f1a265d0d76 377 Gene3D G3DSA:3.40.1690.10 215 354 4.0E-59 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 PANTHER PTHR32552:SF15 679 698 6.0E-90 T 22-04-2016 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 PANTHER PTHR32552:SF15 6 660 6.0E-90 T 22-04-2016 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 SUPERFAMILY SSF56935 27 698 2.93E-123 T 22-04-2016 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 Gene3D G3DSA:2.170.130.10 27 154 2.6E-39 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 Gene3D G3DSA:2.40.170.20 155 698 1.2E-100 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 Pfam PF00593 TonB dependent receptor 420 697 9.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 151 3.1E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 PANTHER PTHR32552 679 698 6.0E-90 T 22-04-2016 YPTB_RS04395 2a4b243f9ba4d55d345eb340f0914073 698 PANTHER PTHR32552 6 660 6.0E-90 T 22-04-2016 YPTB_RS18855 8078c1d02b04e6d977fecf7ff6849af5 129 Pfam PF13721 SecD export protein N-terminal TM region 11 106 5.2E-20 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain YPTB_RS18855 8078c1d02b04e6d977fecf7ff6849af5 129 Hamap MF_00904 Modulator protein MzrA [mzrA]. 10 119 25.263 T 22-04-2016 IPR026574 Modulator protein MzrA YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 1.7E-12 T 22-04-2016 IPR013987 PhnA protein, N-terminal YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 SUPERFAMILY SSF82057 41 112 9.61E-29 T 22-04-2016 YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 Gene3D G3DSA:2.20.25.10 2 41 5.1E-18 T 22-04-2016 YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 Gene3D G3DSA:2.30.30.40 44 112 7.5E-38 T 22-04-2016 YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 2.9E-49 T 22-04-2016 IPR004624 PhnA protein YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 PANTHER PTHR30305 2 113 2.3E-85 T 22-04-2016 YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 SUPERFAMILY SSF57783 3 36 2.55E-12 T 22-04-2016 YPTB_RS14380 3600f3ec8a2a6fa39255db0247b76ed3 113 Pfam PF03831 PhnA domain 47 112 4.8E-34 T 22-04-2016 IPR013988 PhnA protein, C-terminal YPTB_RS14120 853e1cd9f40aebd9e51bd8d559d4de1f 182 PIRSF PIRSF017340 2 171 5.4E-69 T 22-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 YPTB_RS14120 853e1cd9f40aebd9e51bd8d559d4de1f 182 Pfam PF00293 NUDIX domain 37 150 6.6E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS14120 853e1cd9f40aebd9e51bd8d559d4de1f 182 PANTHER PTHR22769:SF25 1 181 9.9E-142 T 22-04-2016 YPTB_RS14120 853e1cd9f40aebd9e51bd8d559d4de1f 182 SUPERFAMILY SSF55811 11 167 7.45E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS14120 853e1cd9f40aebd9e51bd8d559d4de1f 182 Gene3D G3DSA:3.90.79.10 11 172 6.7E-61 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS14120 853e1cd9f40aebd9e51bd8d559d4de1f 182 PANTHER PTHR22769 1 181 9.9E-142 T 22-04-2016 YPTB_RS00905 d1584edf4f7b41415fce12731bb3d3d2 74 SUPERFAMILY SSF54060 1 70 2.06E-24 T 22-04-2016 YPTB_RS00905 d1584edf4f7b41415fce12731bb3d3d2 74 Gene3D G3DSA:3.90.540.10 1 73 2.2E-25 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 YPTB_RS15150 5b969d5a08f616a2d022491b2bd0c086 240 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 73 236 7.0E-94 T 22-04-2016 IPR020193 Flagellin lysine-N-methylase, C-terminal YPTB_RS10440 fd8b8aab9509e7a95b7bf4cd36ac734b 99 SUPERFAMILY SSF160719 16 81 9.55E-25 T 22-04-2016 YPTB_RS10440 fd8b8aab9509e7a95b7bf4cd36ac734b 99 Gene3D G3DSA:3.10.450.40 11 82 1.1E-28 T 22-04-2016 YPTB_RS10440 fd8b8aab9509e7a95b7bf4cd36ac734b 99 PANTHER PTHR35862 5 98 1.1E-33 T 22-04-2016 YPTB_RS10440 fd8b8aab9509e7a95b7bf4cd36ac734b 99 PANTHER PTHR35862:SF2 5 98 1.1E-33 T 22-04-2016 YPTB_RS10440 fd8b8aab9509e7a95b7bf4cd36ac734b 99 Pfam PF04965 Gene 25-like lysozyme 20 81 1.8E-13 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 ProSitePatterns PS01218 TatC family signature. 154 173 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.3E-64 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 PANTHER PTHR30371:SF0 4 258 3.2E-117 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 1.5E-77 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 242 18.116 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPTB_RS01515 088eeecaf061baca2bb83d61e0321977 258 PANTHER PTHR30371 4 258 3.2E-117 T 22-04-2016 YPTB_RS17260 f848318234109885c5c36c9ff7efde8d 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 18 165 7.9E-11 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPTB_RS17260 f848318234109885c5c36c9ff7efde8d 192 PANTHER PTHR37528 2 192 4.6E-66 T 22-04-2016 YPTB_RS17260 f848318234109885c5c36c9ff7efde8d 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 177 2.8E-36 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPTB_RS17260 f848318234109885c5c36c9ff7efde8d 192 SUPERFAMILY SSF101327 8 176 4.97E-51 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPTB_RS17260 f848318234109885c5c36c9ff7efde8d 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 37.498 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPTB_RS08645 8a0f2581aa5a809d0ab8708f1d3428b0 105 PANTHER PTHR39591 2 105 2.4E-61 T 22-04-2016 YPTB_RS08645 8a0f2581aa5a809d0ab8708f1d3428b0 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 3.0E-43 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPTB_RS08645 8a0f2581aa5a809d0ab8708f1d3428b0 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 3.7E-47 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPTB_RS08645 8a0f2581aa5a809d0ab8708f1d3428b0 105 PIRSF PIRSF028773 1 105 8.2E-51 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPTB_RS08645 8a0f2581aa5a809d0ab8708f1d3428b0 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.92 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPTB_RS16005 48a23a23f7e76e2df74b5ae26cc9655e 388 SUPERFAMILY SSF161098 174 356 2.88E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16005 48a23a23f7e76e2df74b5ae26cc9655e 388 Gene3D G3DSA:1.10.3720.10 171 357 3.4E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16005 48a23a23f7e76e2df74b5ae26cc9655e 388 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 360 2.6E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS16005 48a23a23f7e76e2df74b5ae26cc9655e 388 PANTHER PTHR30177 92 376 1.5E-142 T 22-04-2016 YPTB_RS16005 48a23a23f7e76e2df74b5ae26cc9655e 388 PANTHER PTHR30177:SF2 92 376 1.5E-142 T 22-04-2016 YPTB_RS08500 691d841afbb1789d5bd2ac025eef3878 346 PANTHER PTHR30472 15 346 7.1E-158 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS08500 691d841afbb1789d5bd2ac025eef3878 346 PANTHER PTHR30472:SF24 15 346 7.1E-158 T 22-04-2016 YPTB_RS08500 691d841afbb1789d5bd2ac025eef3878 346 Gene3D G3DSA:1.10.3470.10 22 344 2.8E-75 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS08500 691d841afbb1789d5bd2ac025eef3878 346 SUPERFAMILY SSF81345 20 339 4.32E-58 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPTB_RS08500 691d841afbb1789d5bd2ac025eef3878 346 Pfam PF01032 FecCD transport family 35 339 9.7E-75 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPTB_RS06455 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122:SF2 133 241 2.0E-132 T 22-04-2016 YPTB_RS06455 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122:SF2 1 110 2.0E-132 T 22-04-2016 YPTB_RS06455 372147d5400d43f31fb791ab162779f8 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 2.5E-53 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YPTB_RS06455 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122 133 241 2.0E-132 T 22-04-2016 YPTB_RS06455 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122 1 110 2.0E-132 T 22-04-2016 YPTB_RS06455 372147d5400d43f31fb791ab162779f8 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 4.6E-63 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YPTB_RS08655 99b335ad104d9e96c85649f9b9f3b77b 434 Gene3D G3DSA:1.20.1250.20 21 219 1.7E-37 T 22-04-2016 YPTB_RS08655 99b335ad104d9e96c85649f9b9f3b77b 434 PANTHER PTHR11662:SF3 7 422 1.3E-148 T 22-04-2016 YPTB_RS08655 99b335ad104d9e96c85649f9b9f3b77b 434 Gene3D G3DSA:1.20.1250.20 237 421 3.7E-10 T 22-04-2016 YPTB_RS08655 99b335ad104d9e96c85649f9b9f3b77b 434 PANTHER PTHR11662 7 422 1.3E-148 T 22-04-2016 YPTB_RS08655 99b335ad104d9e96c85649f9b9f3b77b 434 Pfam PF07690 Major Facilitator Superfamily 27 388 1.2E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS08655 99b335ad104d9e96c85649f9b9f3b77b 434 SUPERFAMILY SSF103473 6 430 4.71E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS12960 3e38d801c76b3184e1ff0b10b2027153 163 SMART SM00972 105 160 2.9E-19 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS12960 3e38d801c76b3184e1ff0b10b2027153 163 Pfam PF05229 Spore Coat Protein U domain 18 160 7.5E-35 T 22-04-2016 IPR007893 Spore coat protein U YPTB_RS12960 3e38d801c76b3184e1ff0b10b2027153 163 PANTHER PTHR37089 1 163 2.2E-90 T 22-04-2016 YPTB_RS12960 3e38d801c76b3184e1ff0b10b2027153 163 PANTHER PTHR37089:SF4 1 163 2.2E-90 T 22-04-2016 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 PANTHER PTHR23135:SF4 15 491 9.4E-223 T 22-04-2016 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 Pfam PF08245 Mur ligase middle domain 114 318 6.6E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 Gene3D G3DSA:3.40.1390.10 4 104 9.0E-32 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 SUPERFAMILY SSF53244 339 491 1.68E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 5.1E-164 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.032 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 6.0E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 4.6E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 SUPERFAMILY SSF63418 5 103 6.02E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 SUPERFAMILY SSF53623 105 338 1.7E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 Gene3D G3DSA:3.40.1190.10 108 342 9.6E-78 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 PANTHER PTHR23135 15 491 9.4E-223 T 22-04-2016 YPTB_RS03830 64a48ad3b808bbf1ce68cf3001fdf304 495 Gene3D G3DSA:3.90.190.20 343 484 2.2E-58 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPTB_RS02390 7eff6aec5550c84374a5e47480725be8 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.699 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPTB_RS02390 7eff6aec5550c84374a5e47480725be8 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 1.7E-93 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPTB_RS02390 7eff6aec5550c84374a5e47480725be8 293 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 8.7E-60 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPTB_RS02390 7eff6aec5550c84374a5e47480725be8 293 PANTHER PTHR10067 1 293 7.2E-116 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPTB_RS10895 d9cf048577e9e9a84617e95e6190c2ec 310 SUPERFAMILY SSF51182 40 209 2.71E-5 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS00515 93b89324032f242f3a1073164b131315 144 Pfam PF05656 Protein of unknown function (DUF805) 7 132 5.7E-22 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 YPTB_RS00515 93b89324032f242f3a1073164b131315 144 PANTHER PTHR34980:SF1 1 143 2.3E-48 T 22-04-2016 YPTB_RS00515 93b89324032f242f3a1073164b131315 144 PANTHER PTHR34980 1 143 2.3E-48 T 22-04-2016 YPTB_RS06395 74b27488886d158629ec878f82921c0b 388 Gene3D G3DSA:3.30.1150.10 289 388 6.6E-43 T 22-04-2016 YPTB_RS06395 74b27488886d158629ec878f82921c0b 388 Pfam PF06519 TolA C-terminal 293 385 7.4E-37 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 YPTB_RS06395 74b27488886d158629ec878f82921c0b 388 TIGRFAM TIGR02794 tolA_full: protein TolA 13 387 4.0E-99 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 YPTB_RS06395 74b27488886d158629ec878f82921c0b 388 SUPERFAMILY SSF74653 300 388 5.3E-20 T 22-04-2016 YPTB_RS06770 9694743e27b000b19a149e291a13345c 82 Pfam PF04226 Transglycosylase associated protein 33 81 1.9E-15 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 YPTB_RS06770 9694743e27b000b19a149e291a13345c 82 PANTHER PTHR33884 1 82 1.7E-37 T 22-04-2016 YPTB_RS06770 9694743e27b000b19a149e291a13345c 82 PANTHER PTHR33884:SF1 1 82 1.7E-37 T 22-04-2016 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 SMART SM00283 282 529 1.2E-88 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 PANTHER PTHR32089 13 532 5.4E-205 T 22-04-2016 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 PANTHER PTHR32089:SF35 13 532 5.4E-205 T 22-04-2016 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 SMART SM00319 51 191 0.0076 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 SUPERFAMILY SSF47170 44 169 4.32E-14 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 303 332 1.2E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 1.2E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 486 1.2E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 1.2E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 1.2E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 528 6.9E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 SUPERFAMILY SSF58104 249 530 4.19E-70 T 22-04-2016 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 Pfam PF02203 Tar ligand binding domain homologue 16 181 1.7E-28 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 Gene3D G3DSA:1.10.287.950 300 501 8.0E-61 T 22-04-2016 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 Pfam PF00672 HAMP domain 210 276 2.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 307 329 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB_RS13125 028cec658f8d7c765ea66bdca28d743b 568 SMART SM00304 229 281 1.6E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPTB_RS18740 f05ba7272383d64dfb357d51ad22c193 212 PIRSF PIRSF020634 1 211 8.0E-80 T 22-04-2016 IPR011392 Tellurite resistance, TerY YPTB_RS18740 f05ba7272383d64dfb357d51ad22c193 212 SUPERFAMILY SSF53300 5 159 4.87E-23 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18740 f05ba7272383d64dfb357d51ad22c193 212 Pfam PF00092 von Willebrand factor type A domain 6 157 1.5E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18740 f05ba7272383d64dfb357d51ad22c193 212 Gene3D G3DSA:3.40.50.410 6 175 8.9E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18740 f05ba7272383d64dfb357d51ad22c193 212 SMART SM00327 3 178 4.3E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS20695 5f2c4d5aba54ea6f367abf47af662ffa 281 Pfam PF00563 EAL domain 50 266 3.5E-26 T 22-04-2016 IPR001633 EAL domain YPTB_RS20695 5f2c4d5aba54ea6f367abf47af662ffa 281 PANTHER PTHR33121:SF6 1 266 2.3E-126 T 22-04-2016 YPTB_RS20695 5f2c4d5aba54ea6f367abf47af662ffa 281 PANTHER PTHR33121 1 266 2.3E-126 T 22-04-2016 YPTB_RS20695 5f2c4d5aba54ea6f367abf47af662ffa 281 SUPERFAMILY SSF141868 49 274 1.23E-28 T 22-04-2016 IPR001633 EAL domain YPTB_RS20695 5f2c4d5aba54ea6f367abf47af662ffa 281 SMART SM00052 26 271 3.5E-11 T 22-04-2016 IPR001633 EAL domain YPTB_RS20695 5f2c4d5aba54ea6f367abf47af662ffa 281 Gene3D G3DSA:3.20.20.450 55 272 9.5E-22 T 22-04-2016 IPR001633 EAL domain YPTB_RS17695 1bb4e86a1ff6b37d8d45525cc928c2fd 357 SUPERFAMILY SSF51445 6 334 1.95E-52 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS17695 1bb4e86a1ff6b37d8d45525cc928c2fd 357 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 30 295 3.5E-12 T 22-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 YPTB_RS17695 1bb4e86a1ff6b37d8d45525cc928c2fd 357 Gene3D G3DSA:3.20.20.80 14 334 5.6E-48 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 PANTHER PTHR24220 16 388 8.3E-131 T 22-04-2016 YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 SUPERFAMILY SSF52540 279 485 8.74E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 Gene3D G3DSA:3.40.50.300 279 494 5.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 Gene3D G3DSA:3.40.50.300 12 243 3.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 SUPERFAMILY SSF52540 13 240 2.34E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 PANTHER PTHR24220:SF416 16 388 8.3E-131 T 22-04-2016 YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 Pfam PF00005 ABC transporter 280 433 2.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 Pfam PF00005 ABC transporter 30 180 1.8E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 SMART SM00382 288 482 3.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS16785 5277216e8b2f64376a8411e23d52e178 502 SMART SM00382 39 228 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 33 316 1.6E-98 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 SUPERFAMILY SSF69318 386 671 5.62E-18 T 22-04-2016 YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 Gene3D G3DSA:2.130.10.130 391 655 1.7E-6 T 22-04-2016 YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 89 105 3.1E-27 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 30 51 3.1E-27 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 297 315 3.1E-27 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 189 207 3.1E-27 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 643 817 6.5E-30 T 22-04-2016 IPR022045 Insecticide toxin TcdB middle/N-terminal YPTB_RS19220 5ee0e4ed32f246af49b07723161fa17a 1489 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 867 1013 2.7E-55 T 22-04-2016 IPR022044 Insecticide toxin TcdB middle/C-terminal YPTB_RS05870 0604947be5303eaa1e45aaed8e9c28f0 133 Pfam PF06836 Protein of unknown function (DUF1240) 39 132 1.5E-40 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPTB_RS15995 17038ad43c354860b37f4bcce50f78f0 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 11 323 2.4E-144 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS15995 17038ad43c354860b37f4bcce50f78f0 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 277 1.5E-84 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPTB_RS15995 17038ad43c354860b37f4bcce50f78f0 323 SUPERFAMILY SSF47240 10 323 4.71E-105 T 22-04-2016 IPR009078 Ferritin-like superfamily YPTB_RS15995 17038ad43c354860b37f4bcce50f78f0 323 Gene3D G3DSA:1.10.620.20 11 278 2.4E-90 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 YPTB_RS15995 17038ad43c354860b37f4bcce50f78f0 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPTB_RS15995 17038ad43c354860b37f4bcce50f78f0 323 PANTHER PTHR23409 13 319 6.7E-116 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPTB_RS15995 17038ad43c354860b37f4bcce50f78f0 323 PIRSF PIRSF000355 5 320 4.5E-81 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPTB_RS03105 288c0c38bc909cce89b3bb3516fd160e 291 PIRSF PIRSF038992 31 288 2.0E-78 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS03105 288c0c38bc909cce89b3bb3516fd160e 291 Gene3D G3DSA:3.20.20.70 34 284 1.1E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS03105 288c0c38bc909cce89b3bb3516fd160e 291 SMART SM01133 51 259 1.5E-30 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS03105 288c0c38bc909cce89b3bb3516fd160e 291 PANTHER PTHR11627:SF18 69 201 4.0E-18 T 22-04-2016 YPTB_RS03105 288c0c38bc909cce89b3bb3516fd160e 291 SUPERFAMILY SSF51569 35 274 2.49E-63 T 22-04-2016 YPTB_RS03105 288c0c38bc909cce89b3bb3516fd160e 291 Pfam PF01791 DeoC/LacD family aldolase 51 258 6.1E-19 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPTB_RS03105 288c0c38bc909cce89b3bb3516fd160e 291 PANTHER PTHR11627 69 201 4.0E-18 T 22-04-2016 YPTB_RS04240 312328de8eb35b71dc240f5dbabd8b2f 66 SUPERFAMILY SSF54786 1 64 1.88E-11 T 22-04-2016 YPTB_RS04240 312328de8eb35b71dc240f5dbabd8b2f 66 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 63 8.7E-13 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 YPTB_RS04240 312328de8eb35b71dc240f5dbabd8b2f 66 Gene3D G3DSA:3.30.920.30 1 64 4.7E-13 T 22-04-2016 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 PANTHER PTHR17224 1 195 3.0E-83 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 Gene3D G3DSA:3.40.50.1470 4 193 6.0E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 5.5E-52 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 PANTHER PTHR17224:SF1 1 195 3.0E-83 T 22-04-2016 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.339 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 SUPERFAMILY SSF53178 4 193 3.14E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YPTB_RS10955 4995e35a33adea46982edbd2c5c4d2bd 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 1.4E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPTB_RS20775 ff8147fb976448280c37ecf80d7d1af4 556 PIRSF PIRSF029745 2 556 1.2E-175 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPTB_RS20775 ff8147fb976448280c37ecf80d7d1af4 556 PANTHER PTHR34597:SF2 1 556 2.6E-253 T 22-04-2016 YPTB_RS20775 ff8147fb976448280c37ecf80d7d1af4 556 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 152 502 2.2E-19 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPTB_RS20775 ff8147fb976448280c37ecf80d7d1af4 556 Gene3D G3DSA:2.40.160.50 165 556 8.4E-95 T 22-04-2016 YPTB_RS20775 ff8147fb976448280c37ecf80d7d1af4 556 Pfam PF08479 POTRA domain, ShlB-type 59 134 8.7E-16 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB_RS20775 ff8147fb976448280c37ecf80d7d1af4 556 Gene3D G3DSA:3.10.20.310 53 134 3.5E-19 T 22-04-2016 YPTB_RS20775 ff8147fb976448280c37ecf80d7d1af4 556 PANTHER PTHR34597 1 556 2.6E-253 T 22-04-2016 YPTB_RS20950 c458acef082895376ab53aa146bc40ea 240 PANTHER PTHR30399 1 236 7.5E-40 T 22-04-2016 YPTB_RS20950 c458acef082895376ab53aa146bc40ea 240 Pfam PF01863 Protein of unknown function DUF45 23 230 1.6E-60 T 22-04-2016 IPR002725 Protein of unknown function DUF45 YPTB_RS18435 bb4c81410d04d2e9b8eecb0977b1855e 206 PANTHER PTHR23164 1 206 7.8E-55 T 22-04-2016 YPTB_RS18435 bb4c81410d04d2e9b8eecb0977b1855e 206 SMART SM00287 23 89 5.7E-12 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type YPTB_RS18435 bb4c81410d04d2e9b8eecb0977b1855e 206 PIRSF PIRSF006158 1 205 2.0E-69 T 22-04-2016 IPR016476 SH3 domain protein YPTB_RS18435 bb4c81410d04d2e9b8eecb0977b1855e 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 1.3E-52 T 22-04-2016 IPR016476 SH3 domain protein YPTB_RS18435 bb4c81410d04d2e9b8eecb0977b1855e 206 Pfam PF08239 Bacterial SH3 domain 34 81 9.7E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 SMART SM01329 6 355 9.6E-168 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 Gene3D G3DSA:3.40.718.10 4 349 7.3E-115 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 PANTHER PTHR11835:SF37 1 359 8.0E-242 T 22-04-2016 YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 1.0E-81 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 358 1.7E-165 T 22-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 SUPERFAMILY SSF53659 2 359 1.92E-112 T 22-04-2016 YPTB_RS13750 83da8910c41c8663e0c0d9c03e37e4d0 361 PANTHER PTHR11835 1 359 8.0E-242 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 SUPERFAMILY SSF52540 4 224 8.74E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 SUPERFAMILY SSF52540 278 494 1.51E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 PANTHER PTHR24220 7 391 3.5E-241 T 22-04-2016 YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 Gene3D G3DSA:3.40.50.300 255 500 2.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 Gene3D G3DSA:3.40.50.300 2 225 4.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 Pfam PF00005 ABC transporter 21 172 7.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 Pfam PF00005 ABC transporter 282 437 6.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 PANTHER PTHR24220:SF516 7 391 3.5E-241 T 22-04-2016 YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 SMART SM00382 30 251 1.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05925 f4d913bc2059b0f44e03f0684e49fb6a 515 SMART SM00382 291 486 3.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS22195 96468bbe34df9ce32ee4d4b587116d8b 339 PANTHER PTHR11219:SF49 88 328 4.7E-238 T 22-04-2016 YPTB_RS22195 96468bbe34df9ce32ee4d4b587116d8b 339 PANTHER PTHR11219:SF49 1 72 4.7E-238 T 22-04-2016 YPTB_RS22195 96468bbe34df9ce32ee4d4b587116d8b 339 PANTHER PTHR11219 88 328 4.7E-238 T 22-04-2016 YPTB_RS22195 96468bbe34df9ce32ee4d4b587116d8b 339 Pfam PF03527 RHS protein 216 252 3.7E-18 T 22-04-2016 IPR001826 RHS protein YPTB_RS22195 96468bbe34df9ce32ee4d4b587116d8b 339 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 243 327 8.8E-28 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPTB_RS22195 96468bbe34df9ce32ee4d4b587116d8b 339 PANTHER PTHR11219 1 72 4.7E-238 T 22-04-2016 YPTB_RS03270 b2f139ff42ac7c93a95b24d039cba613 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 18.845 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YPTB_RS03270 b2f139ff42ac7c93a95b24d039cba613 53 PIRSF PIRSF036466 1 53 2.6E-19 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YPTB_RS03270 b2f139ff42ac7c93a95b24d039cba613 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.2E-13 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 Pfam PF02040 Arsenical pump membrane protein 4 423 1.1E-161 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PANTHER PTHR10283:SF21 1 427 8.9E-166 T 22-04-2016 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 PANTHER PTHR10283 1 427 8.9E-166 T 22-04-2016 YPTB_RS04360 a708933d8ef77d1c8b9c034c9c324b70 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 4.6E-218 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPTB_RS07625 67c9d5ce2732c36a100f58f0d32c7eb0 186 SUPERFAMILY SSF48600 38 184 2.58E-36 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS07625 67c9d5ce2732c36a100f58f0d32c7eb0 186 Gene3D G3DSA:1.20.59.10 39 104 6.0E-8 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS07625 67c9d5ce2732c36a100f58f0d32c7eb0 186 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 29 141 3.6E-45 T 22-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS07625 67c9d5ce2732c36a100f58f0d32c7eb0 186 Pfam PF01817 Chorismate mutase type II 39 104 6.0E-9 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS07625 67c9d5ce2732c36a100f58f0d32c7eb0 186 PIRSF PIRSF026640 1 186 1.4E-67 T 22-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS07625 67c9d5ce2732c36a100f58f0d32c7eb0 186 SMART SM00830 35 106 1.8E-10 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPTB_RS03540 06fd851a80e6bab949d9a45c2aabac9a 154 Pfam PF12582 Protein of unknown function (DUF3757) 22 140 3.7E-27 T 22-04-2016 IPR022231 Protein of unknown function DUF3757 YPTB_RS12495 43c6c607471fea4294a2ca73335ba893 982 PANTHER PTHR11219 100 690 6.4E-285 T 22-04-2016 YPTB_RS12495 43c6c607471fea4294a2ca73335ba893 982 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 607 687 2.3E-26 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPTB_RS12495 43c6c607471fea4294a2ca73335ba893 982 PANTHER PTHR11219:SF45 100 690 6.4E-285 T 22-04-2016 YPTB_RS01670 3122d49df73954aa91c8d607ffb1baa0 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.403 T 22-04-2016 IPR022973 Ribosomal protein L10 YPTB_RS01670 3122d49df73954aa91c8d607ffb1baa0 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS01670 3122d49df73954aa91c8d607ffb1baa0 165 SUPERFAMILY SSF160369 4 162 4.71E-48 T 22-04-2016 YPTB_RS01670 3122d49df73954aa91c8d607ffb1baa0 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 157 6.0E-4 T 22-04-2016 YPTB_RS01670 3122d49df73954aa91c8d607ffb1baa0 165 PANTHER PTHR11560 1 165 1.4E-61 T 22-04-2016 YPTB_RS01670 3122d49df73954aa91c8d607ffb1baa0 165 Pfam PF00466 Ribosomal protein L10 6 101 2.2E-25 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 PANTHER PTHR30579:SF4 6 302 2.6E-222 T 22-04-2016 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 Pfam PF03466 LysR substrate binding domain 98 273 9.9E-28 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 SUPERFAMILY SSF46785 11 119 2.13E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 Gene3D G3DSA:3.40.190.10 97 196 8.1E-15 T 22-04-2016 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.7E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 PANTHER PTHR30579 6 302 2.6E-222 T 22-04-2016 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 Gene3D G3DSA:3.40.190.10 197 245 8.4E-11 T 22-04-2016 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 SUPERFAMILY SSF53850 96 289 1.14E-29 T 22-04-2016 YPTB_RS14040 dbcf7288dc25175603d8506895b3d353 310 Gene3D G3DSA:1.10.10.10 10 90 4.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS13280 a1d5b611326bef9b9bd2e64e4bf4560e 400 PANTHER PTHR30489:SF8 1 400 1.3E-237 T 22-04-2016 YPTB_RS13280 a1d5b611326bef9b9bd2e64e4bf4560e 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 6.1E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPTB_RS13280 a1d5b611326bef9b9bd2e64e4bf4560e 400 Pfam PF02687 FtsX-like permease family 271 392 2.9E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS13280 a1d5b611326bef9b9bd2e64e4bf4560e 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 5.5E-139 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YPTB_RS13280 a1d5b611326bef9b9bd2e64e4bf4560e 400 PANTHER PTHR30489 1 400 1.3E-237 T 22-04-2016 YPTB_RS08010 28affa95fe6763a3c9309a5ea3ef7699 151 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 2.1E-75 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YPTB_RS08010 28affa95fe6763a3c9309a5ea3ef7699 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.63 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YPTB_RS08010 28affa95fe6763a3c9309a5ea3ef7699 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 5.0E-72 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YPTB_RS13535 37a10c9e696dee7e532deef84a9dd225 307 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 1.5E-144 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPTB_RS13535 37a10c9e696dee7e532deef84a9dd225 307 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 52.786 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPTB_RS13535 37a10c9e696dee7e532deef84a9dd225 307 PANTHER PTHR30606 2 307 3.2E-162 T 22-04-2016 YPTB_RS13535 37a10c9e696dee7e532deef84a9dd225 307 PIRSF PIRSF026649 2 306 9.1E-100 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPTB_RS13535 37a10c9e696dee7e532deef84a9dd225 307 PANTHER PTHR30606:SF5 2 307 3.2E-162 T 22-04-2016 YPTB_RS13535 37a10c9e696dee7e532deef84a9dd225 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 9.1E-102 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPTB_RS05970 fa0f0d1b9fde9bd57d913ee510413f79 64 Gene3D G3DSA:1.20.58.250 11 64 1.6E-17 T 22-04-2016 IPR011326 Homologue of theta DNA polymerase III YPTB_RS05970 fa0f0d1b9fde9bd57d913ee510413f79 64 SUPERFAMILY SSF46575 15 60 6.15E-8 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPTB_RS05970 fa0f0d1b9fde9bd57d913ee510413f79 64 Pfam PF08971 Glycogen synthesis protein 11 58 4.2E-10 T 22-04-2016 IPR015065 Surface composition regulator YPTB_RS14395 f4cf6dab2a18e4da8333e9dd0f9c0f00 268 Gene3D G3DSA:1.25.40.10 21 135 2.2E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS14395 f4cf6dab2a18e4da8333e9dd0f9c0f00 268 SUPERFAMILY SSF144059 5 265 5.75E-86 T 22-04-2016 YPTB_RS14395 f4cf6dab2a18e4da8333e9dd0f9c0f00 268 Pfam PF07024 ImpE protein 145 261 1.3E-41 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type YPTB_RS14395 f4cf6dab2a18e4da8333e9dd0f9c0f00 268 PIRSF PIRSF029288 1 268 4.8E-100 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type YPTB_RS07065 1fb8e971cab49252855f1c683912458f 502 PIRSF PIRSF007349 1 498 1.1E-156 T 22-04-2016 IPR007067 Tail sheath protein YPTB_RS07065 1fb8e971cab49252855f1c683912458f 502 Pfam PF04984 Phage tail sheath protein 8 496 3.4E-47 T 22-04-2016 IPR007067 Tail sheath protein YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 SUPERFAMILY SSF48029 113 323 2.09E-63 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 1.5E-139 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PANTHER PTHR30534:SF0 3 330 1.8E-115 T 22-04-2016 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PANTHER PTHR30534 3 330 1.8E-115 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF14842 FliG N-terminal domain 3 102 1.5E-31 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 5 70 1.6E-17 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 193 327 4.8E-41 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 73 182 8.6E-29 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF14841 FliG middle domain 114 186 5.6E-25 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 SUPERFAMILY SSF48029 4 103 3.66E-21 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PIRSF PIRSF003161 1 330 1.3E-117 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPTB_RS09360 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF01706 FliG C-terminal domain 216 322 4.3E-37 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal YPTB_RS02530 c249487f0638b59541c1fea454587a62 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 101 9.9E-38 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YPTB_RS02530 c249487f0638b59541c1fea454587a62 105 SUPERFAMILY SSF50249 2 104 5.83E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02530 c249487f0638b59541c1fea454587a62 105 PIRSF PIRSF003135 1 102 3.8E-51 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YPTB_RS02530 c249487f0638b59541c1fea454587a62 105 Gene3D G3DSA:2.40.50.140 2 104 2.1E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS02530 c249487f0638b59541c1fea454587a62 105 Hamap MF_00720 Primosomal replication protein n [priB]. 2 101 30.27 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YPTB_RS02530 c249487f0638b59541c1fea454587a62 105 Pfam PF00436 Single-strand binding protein family 4 87 8.6E-14 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 YPTB_RS19455 fa2b195855540b207d426bab3c0d74aa 306 PANTHER PTHR30606:SF7 2 306 1.6E-244 T 22-04-2016 YPTB_RS19455 fa2b195855540b207d426bab3c0d74aa 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 2.8E-136 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPTB_RS19455 fa2b195855540b207d426bab3c0d74aa 306 PIRSF PIRSF026649 3 306 7.4E-93 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPTB_RS19455 fa2b195855540b207d426bab3c0d74aa 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 68.758 T 22-04-2016 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPTB_RS19455 fa2b195855540b207d426bab3c0d74aa 306 PANTHER PTHR30606 2 306 1.6E-244 T 22-04-2016 YPTB_RS19455 fa2b195855540b207d426bab3c0d74aa 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.425 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPTB_RS19455 fa2b195855540b207d426bab3c0d74aa 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.3E-101 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPTB_RS09290 e2249611d39586f559d9f121058673e1 340 PANTHER PTHR32196 32 340 4.2E-131 T 22-04-2016 YPTB_RS09290 e2249611d39586f559d9f121058673e1 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 330 2.5E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS09290 e2249611d39586f559d9f121058673e1 340 PANTHER PTHR32196:SF35 32 340 4.2E-131 T 22-04-2016 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 SUPERFAMILY SSF116726 206 271 1.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF06826 Predicted Permease Membrane Region 10 179 8.4E-47 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 8.8E-46 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 Gene3D G3DSA:3.30.70.1450 213 276 1.1E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 55.297 T 22-04-2016 IPR023018 Transport protein YidE, putative YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 SUPERFAMILY SSF116726 272 358 3.66E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF02080 TrkA-C domain 211 272 8.8E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF02080 TrkA-C domain 293 359 1.2E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 Gene3D G3DSA:3.30.70.1450 290 359 3.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 2.9E-44 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.3E-49 T 22-04-2016 IPR006512 YidE/YbjL duplication YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 PANTHER PTHR30445 1 550 2.8E-287 T 22-04-2016 YPTB_RS21095 7af750baa3628c306fce7810c3a3e5b6 552 PANTHER PTHR30445:SF1 1 550 2.8E-287 T 22-04-2016 YPTB_RS01440 54ad7e81dcd7dbff3ce0b6d1f8c19a90 400 Pfam PF13560 Helix-turn-helix domain 11 64 1.8E-8 T 22-04-2016 YPTB_RS01440 54ad7e81dcd7dbff3ce0b6d1f8c19a90 400 Gene3D G3DSA:1.10.260.40 11 68 3.5E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS01440 54ad7e81dcd7dbff3ce0b6d1f8c19a90 400 SUPERFAMILY SSF47413 10 71 5.35E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS01440 54ad7e81dcd7dbff3ce0b6d1f8c19a90 400 SMART SM00530 12 67 1.8E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS01440 54ad7e81dcd7dbff3ce0b6d1f8c19a90 400 Pfam PF06114 Domain of unknown function (DUF955) 165 281 2.6E-14 T 22-04-2016 IPR010359 HTH domain, IrrE-type YPTB_RS19275 98824e785c47f5a7d2c241aae8d17aaf 331 PIRSF PIRSF038471 2 284 2.4E-74 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YPTB_RS19275 98824e785c47f5a7d2c241aae8d17aaf 331 PANTHER PTHR34138 1 331 1.3E-103 T 22-04-2016 YPTB_RS19275 98824e785c47f5a7d2c241aae8d17aaf 331 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 1.2E-113 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YPTB_RS19275 98824e785c47f5a7d2c241aae8d17aaf 331 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-37 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YPTB_RS19275 98824e785c47f5a7d2c241aae8d17aaf 331 PANTHER PTHR34138:SF1 1 331 1.3E-103 T 22-04-2016 YPTB_RS10945 7d8aba56af920019cfdc683f69a63775 280 Pfam PF13316 Protein of unknown function (DUF4087) 26 120 5.8E-39 T 22-04-2016 IPR025145 Protein of unknown function DUF4087 YPTB_RS17185 a262ac5c67daeb0ba9887e853d2e124d 141 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 130 1.1E-56 T 22-04-2016 IPR009883 Toxin CptA YPTB_RS17185 a262ac5c67daeb0ba9887e853d2e124d 141 PIRSF PIRSF020653 1 139 2.5E-76 T 22-04-2016 IPR009883 Toxin CptA YPTB_RS17185 a262ac5c67daeb0ba9887e853d2e124d 141 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 130 8.0E-53 T 22-04-2016 IPR009883 Toxin CptA YPTB_RS01480 ec4cea2e400948df4333cac72b7a2cf9 176 PANTHER PTHR30353:SF5 4 175 7.8E-60 T 22-04-2016 YPTB_RS01480 ec4cea2e400948df4333cac72b7a2cf9 176 Pfam PF09335 SNARE associated Golgi protein 41 164 1.3E-12 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPTB_RS01480 ec4cea2e400948df4333cac72b7a2cf9 176 PANTHER PTHR30353 4 175 7.8E-60 T 22-04-2016 IPR032818 DedA family YPTB_RS11575 d9ba8f11853742ea1007f1c739ca42e9 98 Gene3D G3DSA:3.30.70.1060 1 98 5.1E-37 T 22-04-2016 YPTB_RS11575 d9ba8f11853742ea1007f1c739ca42e9 98 SUPERFAMILY SSF54909 1 98 2.68E-31 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS11575 d9ba8f11853742ea1007f1c739ca42e9 98 PANTHER PTHR33606 1 98 8.0E-36 T 22-04-2016 YPTB_RS11575 d9ba8f11853742ea1007f1c739ca42e9 98 Pfam PF03795 YCII-related domain 1 95 3.0E-28 T 22-04-2016 IPR005545 YCII-related YPTB_RS02270 176975d4a6e1d4fef3cbd334e4e16cf3 851 Pfam PF03272 Putative mucin or carbohydrate-binding module 731 847 1.4E-28 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPTB_RS02270 176975d4a6e1d4fef3cbd334e4e16cf3 851 Pfam PF03272 Putative mucin or carbohydrate-binding module 536 647 9.3E-30 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPTB_RS02270 176975d4a6e1d4fef3cbd334e4e16cf3 851 SMART SM01276 30 333 2.3E-54 T 22-04-2016 IPR031161 Peptidase family M60 domain YPTB_RS02270 176975d4a6e1d4fef3cbd334e4e16cf3 851 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 116 377 2.0E-15 T 22-04-2016 IPR031161 Peptidase family M60 domain YPTB_RS12790 379838de1622bbfd1edf1f50031b71fd 296 PANTHER PTHR24220:SF533 12 281 1.0E-182 T 22-04-2016 YPTB_RS12790 379838de1622bbfd1edf1f50031b71fd 296 Pfam PF00005 ABC transporter 29 174 4.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS12790 379838de1622bbfd1edf1f50031b71fd 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS12790 379838de1622bbfd1edf1f50031b71fd 296 PANTHER PTHR24220 12 281 1.0E-182 T 22-04-2016 YPTB_RS12790 379838de1622bbfd1edf1f50031b71fd 296 SUPERFAMILY SSF52540 5 237 6.25E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS12790 379838de1622bbfd1edf1f50031b71fd 296 SMART SM00382 36 222 9.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS12790 379838de1622bbfd1edf1f50031b71fd 296 Gene3D G3DSA:3.40.50.300 9 243 1.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20650 96ba44fa45a7e00baa2a4968ca00ef00 375 PANTHER PTHR33744 1 374 5.7E-162 T 22-04-2016 YPTB_RS20650 96ba44fa45a7e00baa2a4968ca00ef00 375 PANTHER PTHR33744:SF1 1 374 5.7E-162 T 22-04-2016 YPTB_RS20650 96ba44fa45a7e00baa2a4968ca00ef00 375 Gene3D G3DSA:1.10.10.60 317 351 2.1E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS20650 96ba44fa45a7e00baa2a4968ca00ef00 375 Pfam PF13556 PucR C-terminal helix-turn-helix domain 315 373 3.6E-19 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain YPTB_RS20650 96ba44fa45a7e00baa2a4968ca00ef00 375 Pfam PF05651 Putative sugar diacid recognition 6 139 2.5E-52 T 22-04-2016 IPR008599 Putative sugar diacid recognition YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 Gene3D G3DSA:3.40.50.300 346 575 9.8E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 PANTHER PTHR24221:SF250 1 590 0.0 T 22-04-2016 YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 Pfam PF00005 ABC transporter 362 511 4.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 Pfam PF00664 ABC transporter transmembrane region 26 300 5.3E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 PANTHER PTHR24221 1 590 0.0 T 22-04-2016 YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 Gene3D G3DSA:1.20.1560.10 9 334 1.9E-60 T 22-04-2016 YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 SUPERFAMILY SSF90123 10 324 1.57E-57 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 SMART SM00382 371 557 7.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS05960 f89c9d189f4b85708619c28f2764b2bb 596 SUPERFAMILY SSF52540 335 582 4.54E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 PANTHER PTHR22573:SF18 7 460 1.6E-202 T 22-04-2016 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 5 136 1.6E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 151 259 3.37E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 170 252 8.5E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.30.310.50 381 459 6.0E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 3 175 6.67E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 374 2.5E-21 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 130 3.4E-34 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 454 4.3E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 2.0E-17 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 PANTHER PTHR22573 7 460 1.6E-202 T 22-04-2016 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF55957 377 459 6.8E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 261 371 1.96E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 253 373 4.4E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS13685 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPTB_RS11610 b845dbd92bf647019d58abd2726aff52 215 Gene3D G3DSA:2.40.160.20 26 215 3.6E-69 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS11610 b845dbd92bf647019d58abd2726aff52 215 SUPERFAMILY SSF56925 27 215 3.66E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS11610 b845dbd92bf647019d58abd2726aff52 215 PANTHER PTHR36920:SF1 5 215 7.0E-96 T 22-04-2016 YPTB_RS11610 b845dbd92bf647019d58abd2726aff52 215 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 207 215 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPTB_RS11610 b845dbd92bf647019d58abd2726aff52 215 PANTHER PTHR36920 5 215 7.0E-96 T 22-04-2016 YPTB_RS11610 b845dbd92bf647019d58abd2726aff52 215 Pfam PF03922 OmpW family 27 215 2.5E-65 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 PRINTS PR00502 NUDIX hydrolase family signature 44 59 3.4E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 PRINTS PR00502 NUDIX hydrolase family signature 30 44 3.4E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 Pfam PF00293 NUDIX domain 4 120 4.1E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 SUPERFAMILY SSF55811 3 124 3.38E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 PANTHER PTHR22769:SF35 1 128 1.6E-39 T 22-04-2016 YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 Gene3D G3DSA:3.90.79.10 3 127 1.6E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS11455 20b52da652f96112cd05929ed2250354 128 PANTHER PTHR22769 1 128 1.6E-39 T 22-04-2016 YPTB_RS04740 123bf3c63d361f8b6e0d81e525efa027 113 PANTHER PTHR35462 9 113 5.9E-70 T 22-04-2016 YPTB_RS04740 123bf3c63d361f8b6e0d81e525efa027 113 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 31 109 7.4E-7 T 22-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPTB_RS04740 123bf3c63d361f8b6e0d81e525efa027 113 PIRSF PIRSF034456 8 113 1.1E-58 T 22-04-2016 IPR017028 Uncharacterised conserved protein UCP034456 YPTB_RS04740 123bf3c63d361f8b6e0d81e525efa027 113 PANTHER PTHR35462:SF1 9 113 5.9E-70 T 22-04-2016 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931 1 272 0.0 T 22-04-2016 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931 288 790 0.0 T 22-04-2016 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 791 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.30.470.20 200 356 9.7E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF52009 351 469 7.98E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF56059 10 387 2.94E-106 T 22-04-2016 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 6.6E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.50.30.10 377 473 1.2E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 PIRSF PIRSF000854 6 794 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF51621 470 792 3.4E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 4.6E-117 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931:SF7 1 272 0.0 T 22-04-2016 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931:SF7 288 790 0.0 T 22-04-2016 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 790 3.7E-60 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.20.20.60 485 792 1.2E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPTB_RS12640 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.30.1490.20 10 198 2.6E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPTB_RS07365 9991e3c8c8b813deba1212e854329697 214 Gene3D G3DSA:1.10.10.10 6 93 8.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07365 9991e3c8c8b813deba1212e854329697 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 20 91 6.7E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS07365 9991e3c8c8b813deba1212e854329697 214 SMART SM00862 18 92 1.5E-8 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS07365 9991e3c8c8b813deba1212e854329697 214 SUPERFAMILY SSF46894 6 92 5.39E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 104 139 6.9E-14 T 22-04-2016 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 3 71 4.5E-29 T 22-04-2016 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 140 184 4.5E-29 T 22-04-2016 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 PANTHER PTHR11938 1 155 2.6E-101 T 22-04-2016 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 72 103 9.6E-12 T 22-04-2016 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 9.7E-28 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 SUPERFAMILY SSF54862 1 199 1.15E-62 T 22-04-2016 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 PANTHER PTHR11938:SF85 1 155 2.6E-101 T 22-04-2016 YPTB_RS14565 f6a178f48df086282e5dc9a49afe19ee 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 1.4E-77 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B YPTB_RS15580 a43d4f59be23734079f8fb91e4451fe3 231 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 22 231 4.0E-135 T 22-04-2016 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPTB_RS15580 a43d4f59be23734079f8fb91e4451fe3 231 Pfam PF12710 haloacid dehalogenase-like hydrolase 29 212 1.1E-13 T 22-04-2016 YPTB_RS15580 a43d4f59be23734079f8fb91e4451fe3 231 SUPERFAMILY SSF56784 22 213 9.18E-10 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS15580 a43d4f59be23734079f8fb91e4451fe3 231 Gene3D G3DSA:3.40.50.1000 124 157 8.4E-7 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS15580 a43d4f59be23734079f8fb91e4451fe3 231 Gene3D G3DSA:3.40.50.1000 23 49 8.4E-7 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS03055 945915502f6e7e837f6bcd9a813baddd 348 PANTHER PTHR22726:SF7 1 348 1.4E-162 T 22-04-2016 YPTB_RS03055 945915502f6e7e837f6bcd9a813baddd 348 Gene3D G3DSA:3.30.2010.10 176 237 2.7E-11 T 22-04-2016 YPTB_RS03055 945915502f6e7e837f6bcd9a813baddd 348 PANTHER PTHR22726 1 348 1.4E-162 T 22-04-2016 YPTB_RS03055 945915502f6e7e837f6bcd9a813baddd 348 Pfam PF01435 Peptidase family M48 157 340 1.3E-26 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPTB_RS11420 833d471f3cccaf11a7dd42123a7f6ef8 215 PANTHER PTHR11080 1 211 7.4E-68 T 22-04-2016 YPTB_RS11420 833d471f3cccaf11a7dd42123a7f6ef8 215 Gene3D G3DSA:3.40.50.850 1 210 2.2E-64 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YPTB_RS11420 833d471f3cccaf11a7dd42123a7f6ef8 215 PANTHER PTHR11080:SF2 1 211 7.4E-68 T 22-04-2016 YPTB_RS11420 833d471f3cccaf11a7dd42123a7f6ef8 215 SUPERFAMILY SSF52499 2 211 1.16E-53 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YPTB_RS11420 833d471f3cccaf11a7dd42123a7f6ef8 215 Pfam PF00857 Isochorismatase family 4 205 3.0E-36 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YPTB_RS05410 e170c44f73704e57c10cc6de67d4d054 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 4.0E-33 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPTB_RS05410 e170c44f73704e57c10cc6de67d4d054 67 SUPERFAMILY SSF68989 1 67 1.22E-30 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPTB_RS05410 e170c44f73704e57c10cc6de67d4d054 67 Gene3D G3DSA:1.20.1280.40 1 67 4.8E-37 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPTB_RS09300 5e33ec32ccbbef101f9de8233a95f1b6 199 SUPERFAMILY SSF56399 9 100 1.51E-15 T 22-04-2016 YPTB_RS02135 529a47e44590852b3b26886fdad28095 288 PANTHER PTHR11048 9 288 3.3E-97 T 22-04-2016 YPTB_RS02135 529a47e44590852b3b26886fdad28095 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site YPTB_RS02135 529a47e44590852b3b26886fdad28095 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 287 2.1E-111 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 YPTB_RS02135 529a47e44590852b3b26886fdad28095 288 Pfam PF01040 UbiA prenyltransferase family 28 270 2.8E-67 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YPTB_RS02135 529a47e44590852b3b26886fdad28095 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.223 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 Gene3D G3DSA:3.30.300.30 457 555 4.7E-28 T 22-04-2016 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 Gene3D G3DSA:3.40.50.980 217 379 1.1E-39 T 22-04-2016 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 Gene3D G3DSA:3.40.50.980 24 152 4.2E-39 T 22-04-2016 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 Gene3D G3DSA:3.40.50.980 185 216 4.2E-39 T 22-04-2016 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 PANTHER PTHR24096 176 560 3.8E-173 T 22-04-2016 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 PANTHER PTHR24096 8 153 3.8E-173 T 22-04-2016 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 8.0E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 Pfam PF00501 AMP-binding enzyme 29 460 3.8E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 SUPERFAMILY SSF56801 17 554 1.57E-147 T 22-04-2016 YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS11275 b017b12e753d19eb6b3a41eb6f0daff7 562 Gene3D G3DSA:2.30.38.10 380 451 8.0E-30 T 22-04-2016 YPTB_RS14315 4b6b7ebc0b442bcce231c5a7795c1cbc 408 SUPERFAMILY SSF48452 162 268 8.73E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS14315 4b6b7ebc0b442bcce231c5a7795c1cbc 408 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 112 8.2E-31 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI YPTB_RS14315 4b6b7ebc0b442bcce231c5a7795c1cbc 408 PANTHER PTHR30009 1 309 3.5E-181 T 22-04-2016 YPTB_RS14315 4b6b7ebc0b442bcce231c5a7795c1cbc 408 PANTHER PTHR30009:SF10 1 309 3.5E-181 T 22-04-2016 YPTB_RS14315 4b6b7ebc0b442bcce231c5a7795c1cbc 408 Gene3D G3DSA:1.25.40.10 193 284 1.1E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS14315 4b6b7ebc0b442bcce231c5a7795c1cbc 408 Pfam PF14559 Tetratricopeptide repeat 175 242 3.8E-11 T 22-04-2016 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 Gene3D G3DSA:3.30.930.10 9 327 9.6E-134 T 22-04-2016 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.807 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 SUPERFAMILY SSF46589 14 99 8.37E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 SUPERFAMILY SSF55681 92 327 2.7E-81 T 22-04-2016 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.4E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.1E-25 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.4E-117 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPTB_RS12735 fe1e10c304967e732d3ff057ff1fda42 327 PANTHER PTHR11538 92 327 5.2E-121 T 22-04-2016 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 Pfam PF00577 Outer membrane usher protein 222 796 2.9E-145 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 Pfam PF13953 PapC C-terminal domain 805 865 5.9E-18 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 PANTHER PTHR30451 7 581 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 PANTHER PTHR30451 601 883 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 Pfam PF13954 PapC N-terminal domain 42 203 2.9E-36 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 SUPERFAMILY SSF141729 41 180 2.09E-24 T 22-04-2016 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 PANTHER PTHR30451:SF7 7 581 0.0 T 22-04-2016 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 PANTHER PTHR30451:SF7 601 883 0.0 T 22-04-2016 YPTB_RS00960 9f3dcb1c6d39555c250a2950c2fd2b6e 883 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 335 345 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 PANTHER PTHR22939 1 451 4.8E-107 T 22-04-2016 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 223 272 3.8E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 SUPERFAMILY SSF50156 86 186 1.25E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 PANTHER PTHR22939:SF78 1 451 4.8E-107 T 22-04-2016 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 Gene3D G3DSA:2.30.42.10 214 289 4.8E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 Gene3D G3DSA:2.30.42.10 96 182 3.7E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 SMART SM00228 211 280 5.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 SMART SM00228 115 186 0.18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 SUPERFAMILY SSF50156 195 290 2.5E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 451 5.7E-160 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 YPTB_RS16220 51bce49ee2f68b63f908a0b2d474290a 451 Pfam PF02163 Peptidase family M50 10 439 4.7E-88 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 SUPERFAMILY SSF52540 4 230 5.44E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 SUPERFAMILY SSF52540 255 486 4.69E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 PANTHER PTHR24220 7 379 1.2E-145 T 22-04-2016 YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 Pfam PF00005 ABC transporter 21 170 2.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 Pfam PF00005 ABC transporter 269 424 3.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 PANTHER PTHR24220:SF308 7 379 1.2E-145 T 22-04-2016 YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 Gene3D G3DSA:3.40.50.300 3 233 2.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 Gene3D G3DSA:3.40.50.300 258 492 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 SMART SM00382 30 218 9.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS17495 ecad5f6b165c10625091596284a576f5 499 SMART SM00382 278 473 0.01 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS03010 5d15f456f2bcae339189ac616dad4869 149 SUPERFAMILY SSF102400 1 143 9.55E-48 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YPTB_RS03010 5d15f456f2bcae339189ac616dad4869 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 3.8E-39 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YPTB_RS03010 5d15f456f2bcae339189ac616dad4869 149 PANTHER PTHR38767 2 149 8.5E-68 T 22-04-2016 YPTB_RS03010 5d15f456f2bcae339189ac616dad4869 149 Gene3D G3DSA:3.40.50.10110 1 143 1.7E-53 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YPTB_RS00630 565a2fd799ede53726702e8f6e5120c2 105 SUPERFAMILY SSF47598 2 105 3.78E-57 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPTB_RS00630 565a2fd799ede53726702e8f6e5120c2 105 Gene3D G3DSA:1.10.140.10 2 105 1.7E-64 T 22-04-2016 IPR023453 Methionine repressor MetJ domain YPTB_RS00630 565a2fd799ede53726702e8f6e5120c2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YPTB_RS00630 565a2fd799ede53726702e8f6e5120c2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 5.1E-58 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YPTB_RS00630 565a2fd799ede53726702e8f6e5120c2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.23 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 PANTHER PTHR32305 111 1002 0.0 T 22-04-2016 YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 PANTHER PTHR32305 1105 1372 0.0 T 22-04-2016 YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 Pfam PF05593 RHS Repeat 1043 1079 1.0E-5 T 22-04-2016 IPR031325 RHS repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 Pfam PF05593 RHS Repeat 689 725 1.3E-6 T 22-04-2016 IPR031325 RHS repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 PRINTS PR00394 RHS protein signature 1317 1337 4.3E-14 T 22-04-2016 IPR001826 RHS protein YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 PRINTS PR00394 RHS protein signature 1340 1359 4.3E-14 T 22-04-2016 IPR001826 RHS protein YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 PRINTS PR00394 RHS protein signature 1263 1283 4.3E-14 T 22-04-2016 IPR001826 RHS protein YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1297 1372 4.3E-25 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 773 813 2.2E-9 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1064 1089 0.0023 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 647 688 1.9E-10 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 815 855 4.9E-10 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 857 893 3.0E-7 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 605 646 1.2E-10 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 689 729 1.5E-10 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 735 771 0.0015 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 495 535 3.6E-8 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1134 1170 8.6E-8 T 22-04-2016 IPR006530 YD repeat YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 Pfam PF03527 RHS protein 1269 1302 8.5E-11 T 22-04-2016 IPR001826 RHS protein YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 PANTHER PTHR32305:SF6 111 1002 0.0 T 22-04-2016 YPTB_RS17760 510566910caf581d926c2a11f5f4fb9e 1494 PANTHER PTHR32305:SF6 1105 1372 0.0 T 22-04-2016 YPTB_RS13765 63ed43e22b727223831b8f18a32585b9 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 321 8.2E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS13765 63ed43e22b727223831b8f18a32585b9 330 PANTHER PTHR32196 1 330 9.1E-124 T 22-04-2016 YPTB_RS13765 63ed43e22b727223831b8f18a32585b9 330 PANTHER PTHR32196:SF21 1 330 9.1E-124 T 22-04-2016 YPTB_RS01710 15dc8c350ec438a37bae5ce4f185ef11 265 Pfam PF00899 ThiF family 15 258 1.1E-61 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS01710 15dc8c350ec438a37bae5ce4f185ef11 265 SUPERFAMILY SSF69572 5 263 2.62E-79 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPTB_RS01710 15dc8c350ec438a37bae5ce4f185ef11 265 PANTHER PTHR10953 1 262 2.1E-149 T 22-04-2016 YPTB_RS01710 15dc8c350ec438a37bae5ce4f185ef11 265 PANTHER PTHR10953:SF158 1 262 2.1E-149 T 22-04-2016 YPTB_RS01710 15dc8c350ec438a37bae5ce4f185ef11 265 Gene3D G3DSA:3.40.50.720 7 262 2.2E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 Pfam PF11700 Vacuole effluxer Atg22 like 399 449 6.0E-6 T 22-04-2016 IPR024671 Autophagy-related protein 22-like YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 PANTHER PTHR11662:SF267 9 454 0.0 T 22-04-2016 YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 PANTHER PTHR11662 9 454 0.0 T 22-04-2016 YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 Gene3D G3DSA:1.20.1250.20 32 232 2.5E-42 T 22-04-2016 YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 Gene3D G3DSA:1.20.1250.20 265 444 1.4E-20 T 22-04-2016 YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 Pfam PF07690 Major Facilitator Superfamily 40 395 4.3E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 SUPERFAMILY SSF103473 22 447 3.79E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS09060 0c39a344e401feafc8a444d1ad3ec041 455 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 436 6.6E-237 T 22-04-2016 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 YPTB_RS01555 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 PANTHER PTHR10804:SF101 1 440 1.8E-270 T 22-04-2016 YPTB_RS01555 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTB_RS01555 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 SUPERFAMILY SSF55920 163 438 4.84E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS01555 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 Pfam PF00557 Metallopeptidase family M24 168 430 2.6E-41 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS01555 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 PANTHER PTHR10804 1 440 1.8E-270 T 22-04-2016 YPTB_RS01555 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 Gene3D G3DSA:3.90.230.10 161 439 5.6E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPTB_RS01555 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.676 T 22-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 YPTB_RS08005 794048a438b64884df71657ae720eef2 583 SUPERFAMILY SSF54211 347 538 3.72E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB_RS08005 794048a438b64884df71657ae720eef2 583 Pfam PF13654 AAA domain 132 321 2.8E-20 T 22-04-2016 YPTB_RS08005 794048a438b64884df71657ae720eef2 583 PANTHER PTHR10046:SF49 130 544 2.2E-163 T 22-04-2016 YPTB_RS08005 794048a438b64884df71657ae720eef2 583 Gene3D G3DSA:3.30.230.10 339 539 2.6E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB_RS08005 794048a438b64884df71657ae720eef2 583 PANTHER PTHR10046 130 544 2.2E-163 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 YPTB_RS08005 794048a438b64884df71657ae720eef2 583 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 433 534 3.8E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 YPTB_RS08005 794048a438b64884df71657ae720eef2 583 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 460 479 9.5E-9 T 22-04-2016 YPTB_RS08005 794048a438b64884df71657ae720eef2 583 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 430 449 9.5E-9 T 22-04-2016 YPTB_RS08005 794048a438b64884df71657ae720eef2 583 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 490 508 9.5E-9 T 22-04-2016 YPTB_RS10610 64760a0ab26dc15767454cdde1024c2c 199 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 198 2.3E-102 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS10610 64760a0ab26dc15767454cdde1024c2c 199 PIRSF PIRSF006102 1 199 4.4E-56 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS10610 64760a0ab26dc15767454cdde1024c2c 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 197 5.4E-52 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS10610 64760a0ab26dc15767454cdde1024c2c 199 PANTHER PTHR30335:SF1 3 199 1.4E-139 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS10610 64760a0ab26dc15767454cdde1024c2c 199 PANTHER PTHR30335 3 199 1.4E-139 T 22-04-2016 YPTB_RS10610 64760a0ab26dc15767454cdde1024c2c 199 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 199 28.713 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPTB_RS06995 9c549b41dfa07e8a74d767764b107af3 508 Gene3D G3DSA:1.20.1250.20 242 437 4.9E-6 T 22-04-2016 YPTB_RS06995 9c549b41dfa07e8a74d767764b107af3 508 Gene3D G3DSA:1.20.1250.20 9 204 1.4E-13 T 22-04-2016 YPTB_RS06995 9c549b41dfa07e8a74d767764b107af3 508 SUPERFAMILY SSF103473 8 442 3.4E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS06995 9c549b41dfa07e8a74d767764b107af3 508 PANTHER PTHR11328 2 484 4.3E-124 T 22-04-2016 YPTB_RS06995 9c549b41dfa07e8a74d767764b107af3 508 PANTHER PTHR11328:SF24 2 484 4.3E-124 T 22-04-2016 YPTB_RS06995 9c549b41dfa07e8a74d767764b107af3 508 Pfam PF13347 MFS/sugar transport protein 13 445 2.7E-47 T 22-04-2016 YPTB_RS13655 8b032e6ad0d33c215b5ec1115a459630 312 PANTHER PTHR37036 2 312 6.9E-282 T 22-04-2016 YPTB_RS13655 8b032e6ad0d33c215b5ec1115a459630 312 SUPERFAMILY SSF75005 23 310 5.1E-56 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPTB_RS13655 8b032e6ad0d33c215b5ec1115a459630 312 PANTHER PTHR37036:SF1 2 312 6.9E-282 T 22-04-2016 YPTB_RS13655 8b032e6ad0d33c215b5ec1115a459630 312 Pfam PF08950 Protein of unknown function (DUF1861) 22 310 2.0E-123 T 22-04-2016 IPR015045 Protein of unknown function DUF1861 YPTB_RS10940 ec5d8ccc0dd0f570da5639705acc03fb 231 SUPERFAMILY SSF81342 16 133 2.67E-5 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPTB_RS10940 ec5d8ccc0dd0f570da5639705acc03fb 231 Pfam PF14358 Domain of unknown function (DUF4405) 73 131 1.8E-13 T 22-04-2016 IPR025517 Domain of unknown function DUF4405 YPTB_RS16730 c0833bf9070548425deca0ad169f0273 435 PANTHER PTHR11662 14 433 5.8E-279 T 22-04-2016 YPTB_RS16730 c0833bf9070548425deca0ad169f0273 435 Gene3D G3DSA:1.20.1250.20 19 211 9.6E-45 T 22-04-2016 YPTB_RS16730 c0833bf9070548425deca0ad169f0273 435 SUPERFAMILY SSF103473 14 431 8.5E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS16730 c0833bf9070548425deca0ad169f0273 435 Pfam PF07690 Major Facilitator Superfamily 29 389 8.7E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS16730 c0833bf9070548425deca0ad169f0273 435 PANTHER PTHR11662:SF285 14 433 5.8E-279 T 22-04-2016 YPTB_RS16730 c0833bf9070548425deca0ad169f0273 435 Gene3D G3DSA:1.20.1250.20 237 430 3.1E-22 T 22-04-2016 YPTB_RS07510 4fb9b927e55646cc660570b6c2cda65a 104 Pfam PF07214 Protein of unknown function (DUF1418) 1 97 9.6E-41 T 22-04-2016 IPR010815 Protein of unknown function DUF1418 YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 PANTHER PTHR22762 17 788 1.3E-294 T 22-04-2016 YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 SUPERFAMILY SSF74650 2 243 7.22E-47 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 PANTHER PTHR22762:SF7 17 788 1.3E-294 T 22-04-2016 YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 SUPERFAMILY SSF51011 597 678 4.75E-19 T 22-04-2016 YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 SUPERFAMILY SSF51445 247 594 4.51E-66 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 Pfam PF01055 Glycosyl hydrolases family 31 238 682 9.1E-115 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 Pfam PF13802 Galactose mutarotase-like 146 213 2.8E-22 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPTB_RS16735 460efceb956c8eb05264a04158cc1fb7 791 Pfam PF17137 Domain of unknown function (DUF5110) 700 767 1.6E-8 T 22-04-2016 IPR033403 Domain of unknown function DUF5110 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 PANTHER PTHR11113 1 380 2.1E-181 T 22-04-2016 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 SUPERFAMILY SSF51556 54 350 2.77E-100 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 Gene3D G3DSA:2.30.40.10 350 366 2.9E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 Gene3D G3DSA:2.30.40.10 2 54 2.9E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 Pfam PF01979 Amidohydrolase family 50 379 1.6E-41 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 Gene3D G3DSA:3.20.20.140 55 349 8.5E-97 T 22-04-2016 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 PANTHER PTHR11113:SF7 1 380 2.1E-181 T 22-04-2016 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.4E-163 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 SUPERFAMILY SSF51338 1 53 2.64E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS06190 cd0ebf571459666db9e506de4e8ed379 381 PIRSF PIRSF038994 1 381 6.3E-116 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPTB_RS18695 5a31c2b0402c0bbea484704c5fff78a2 1077 Pfam PF04829 Pre-toxin domain with VENN motif 738 787 2.2E-21 T 22-04-2016 IPR006914 VENN motif-containing domain YPTB_RS18695 5a31c2b0402c0bbea484704c5fff78a2 1077 Pfam PF13332 Haemagluttinin repeat 214 384 2.6E-41 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS18695 5a31c2b0402c0bbea484704c5fff78a2 1077 Pfam PF13332 Haemagluttinin repeat 67 170 1.1E-6 T 22-04-2016 IPR025157 Haemagluttinin repeat YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 PANTHER PTHR32552:SF37 1 63 0.0 T 22-04-2016 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 PANTHER PTHR32552:SF37 87 753 0.0 T 22-04-2016 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 SUPERFAMILY SSF56935 87 753 1.83E-111 T 22-04-2016 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 97 753 3.6E-101 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 95 197 1.1E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 Gene3D G3DSA:2.40.170.20 211 753 1.8E-114 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 Pfam PF00593 TonB dependent receptor 512 752 9.0E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 Gene3D G3DSA:2.170.130.10 74 204 8.0E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 736 753 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 PANTHER PTHR32552 1 63 0.0 T 22-04-2016 YPTB_RS08515 3ec2ee764ff349d29475f8e5df5d86ad 753 PANTHER PTHR32552 87 753 0.0 T 22-04-2016 YPTB_RS16020 e8a641339d0664218814c0a6eda52f0a 494 PANTHER PTHR30618:SF6 1 494 0.0 T 22-04-2016 YPTB_RS16020 e8a641339d0664218814c0a6eda52f0a 494 PANTHER PTHR30618 1 494 0.0 T 22-04-2016 YPTB_RS16020 e8a641339d0664218814c0a6eda52f0a 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 27 462 2.0E-85 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 YPTB_RS06230 c501220ea87ba14bcd81957c49e79617 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 6.5E-8 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 YPTB_RS07235 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465 2 45 1.1E-227 T 22-04-2016 YPTB_RS07235 d6e87075e7b2d148bdc5cdb12b33ef57 366 SUPERFAMILY SSF161098 130 346 6.67E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07235 d6e87075e7b2d148bdc5cdb12b33ef57 366 Gene3D G3DSA:1.10.3720.10 130 352 2.2E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07235 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465:SF66 71 362 1.1E-227 T 22-04-2016 YPTB_RS07235 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465:SF66 2 45 1.1E-227 T 22-04-2016 YPTB_RS07235 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465 71 362 1.1E-227 T 22-04-2016 YPTB_RS07235 d6e87075e7b2d148bdc5cdb12b33ef57 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 360 9.6E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12255 a3e558091358ff076b97b18ba4695bc7 898 Pfam PF11739 Dicarboxylate transport 661 862 2.7E-66 T 22-04-2016 IPR021730 Dicarboxylate transport YPTB_RS18810 ae4821833333181d0aa87d098c99ab84 176 Pfam PF10688 Bacterial inner membrane protein 5 162 1.1E-52 T 22-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV YPTB_RS18810 ae4821833333181d0aa87d098c99ab84 176 PIRSF PIRSF011443 1 176 2.0E-60 T 22-04-2016 IPR026267 Inner membrane protein YgjV YPTB_RS04215 b7ea5b07e054961166ef0772eb8df7d6 119 Gene3D G3DSA:3.30.479.10 2 118 2.9E-40 T 22-04-2016 YPTB_RS04215 b7ea5b07e054961166ef0772eb8df7d6 119 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.3E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPTB_RS04215 b7ea5b07e054961166ef0772eb8df7d6 119 PANTHER PTHR12589 5 119 1.1E-50 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPTB_RS04215 b7ea5b07e054961166ef0772eb8df7d6 119 PIRSF PIRSF006113 1 119 5.3E-54 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPTB_RS04215 b7ea5b07e054961166ef0772eb8df7d6 119 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 118 1.1E-34 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPTB_RS04215 b7ea5b07e054961166ef0772eb8df7d6 119 SUPERFAMILY SSF55620 3 119 1.56E-40 T 22-04-2016 YPTB_RS17950 d2e077b0060b8d55eef951e57b3c4c73 303 PANTHER PTHR30329:SF6 4 297 2.0E-229 T 22-04-2016 YPTB_RS17950 d2e077b0060b8d55eef951e57b3c4c73 303 Pfam PF00691 OmpA family 170 265 3.7E-12 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS17950 d2e077b0060b8d55eef951e57b3c4c73 303 SUPERFAMILY SSF103088 155 273 3.01E-19 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS17950 d2e077b0060b8d55eef951e57b3c4c73 303 Gene3D G3DSA:3.30.1330.60 150 273 1.2E-14 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS17950 d2e077b0060b8d55eef951e57b3c4c73 303 PANTHER PTHR30329 4 297 2.0E-229 T 22-04-2016 YPTB_RS17950 d2e077b0060b8d55eef951e57b3c4c73 303 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 17 67 5.5E-14 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 SUPERFAMILY SSF52540 12 239 1.43E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 SMART SM00382 38 228 2.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 SMART SM00382 288 483 0.031 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 Gene3D G3DSA:3.40.50.300 259 497 1.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 PANTHER PTHR24220:SF538 15 388 5.0E-241 T 22-04-2016 YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 SUPERFAMILY SSF52540 268 493 1.78E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 PANTHER PTHR24220 15 388 5.0E-241 T 22-04-2016 YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 Gene3D G3DSA:3.40.50.300 12 241 1.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 Pfam PF00005 ABC transporter 29 180 6.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS04445 9e868b740e319ee3eff48919de0e8489 504 Pfam PF00005 ABC transporter 280 434 3.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS01430 5b6a82b3f5c1a77f4ac2c5a9e93d3777 318 PANTHER PTHR31752:SF13 102 316 1.2E-81 T 22-04-2016 YPTB_RS01430 5b6a82b3f5c1a77f4ac2c5a9e93d3777 318 PANTHER PTHR31752 102 316 1.2E-81 T 22-04-2016 YPTB_RS01430 5b6a82b3f5c1a77f4ac2c5a9e93d3777 318 Pfam PF03547 Membrane transport protein 168 310 2.7E-15 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YPTB_RS07245 6fef2ddeb9af898b3fb3a5b492386e4c 490 Pfam PF12792 CSS motif domain associated with EAL 10 197 6.9E-33 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YPTB_RS07245 6fef2ddeb9af898b3fb3a5b492386e4c 490 PANTHER PTHR33121:SF1 136 489 8.7E-134 T 22-04-2016 YPTB_RS07245 6fef2ddeb9af898b3fb3a5b492386e4c 490 Pfam PF00563 EAL domain 236 469 2.5E-64 T 22-04-2016 IPR001633 EAL domain YPTB_RS07245 6fef2ddeb9af898b3fb3a5b492386e4c 490 Gene3D G3DSA:3.20.20.450 234 481 5.2E-72 T 22-04-2016 IPR001633 EAL domain YPTB_RS07245 6fef2ddeb9af898b3fb3a5b492386e4c 490 SUPERFAMILY SSF141868 235 482 5.49E-72 T 22-04-2016 IPR001633 EAL domain YPTB_RS07245 6fef2ddeb9af898b3fb3a5b492386e4c 490 SMART SM00052 229 474 2.4E-83 T 22-04-2016 IPR001633 EAL domain YPTB_RS07245 6fef2ddeb9af898b3fb3a5b492386e4c 490 PANTHER PTHR33121 136 489 8.7E-134 T 22-04-2016 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 PANTHER PTHR11879 1 396 0.0 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 PANTHER PTHR11879:SF7 1 396 0.0 T 22-04-2016 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.7E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.7E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.7E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.7E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 Pfam PF00155 Aminotransferase class I and II 27 392 4.5E-79 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 Gene3D G3DSA:3.40.640.10 46 316 2.4E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS02185 5ca8bdc05d99a4c9616c0b0066d6ce4a 397 SUPERFAMILY SSF53383 1 389 4.58E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS01080 226136f33cfd7c7aa108b1d04b0b693a 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS01080 226136f33cfd7c7aa108b1d04b0b693a 463 PIRSF PIRSF006060 1 461 3.5E-60 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS01080 226136f33cfd7c7aa108b1d04b0b693a 463 Pfam PF00324 Amino acid permease 18 430 4.8E-101 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS01080 226136f33cfd7c7aa108b1d04b0b693a 463 PANTHER PTHR11785 1 462 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS01080 226136f33cfd7c7aa108b1d04b0b693a 463 PANTHER PTHR11785:SF28 1 462 0.0 T 22-04-2016 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 SUPERFAMILY SSF109998 203 240 1.44E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 SUPERFAMILY SSF109998 39 169 1.44E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 SUPERFAMILY SSF54534 225 357 4.97E-23 T 22-04-2016 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 Pfam PF13145 PPIC-type PPIASE domain 249 370 3.4E-23 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 Pfam PF13624 SurA N-terminal domain 1 166 5.8E-50 T 22-04-2016 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 PANTHER PTHR10657 1 175 3.4E-249 T 22-04-2016 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 PANTHER PTHR10657 203 518 3.4E-249 T 22-04-2016 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 Gene3D G3DSA:1.10.3120.10 42 124 5.6E-5 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 Gene3D G3DSA:3.10.50.40 261 382 1.6E-28 T 22-04-2016 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 PANTHER PTHR10657:SF13 1 175 3.4E-249 T 22-04-2016 YPTB_RS05335 e1193ad908765d1e8a2c156bb0548277 628 PANTHER PTHR10657:SF13 203 518 3.4E-249 T 22-04-2016 YPTB_RS12335 f9e9eae116cee3014d7b8d3d446688a6 148 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 147 1.1E-54 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 YPTB_RS12335 f9e9eae116cee3014d7b8d3d446688a6 148 Pfam PF09722 Protein of unknown function (DUF2384) 94 145 5.6E-14 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 YPTB_RS12850 f86abf1752e1c8ea365bbf35274ac528 306 Gene3D G3DSA:1.10.3720.10 28 293 7.0E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12850 f86abf1752e1c8ea365bbf35274ac528 306 PANTHER PTHR32243 25 306 4.0E-156 T 22-04-2016 YPTB_RS12850 f86abf1752e1c8ea365bbf35274ac528 306 PANTHER PTHR32243:SF8 25 306 4.0E-156 T 22-04-2016 YPTB_RS12850 f86abf1752e1c8ea365bbf35274ac528 306 SUPERFAMILY SSF161098 30 306 6.54E-71 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS12850 f86abf1752e1c8ea365bbf35274ac528 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 300 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS20500 e68a368cb529544c9f0ac8c48709520b 197 PANTHER PTHR33508 1 195 1.3E-94 T 22-04-2016 YPTB_RS20500 e68a368cb529544c9f0ac8c48709520b 197 PANTHER PTHR33508:SF4 1 195 1.3E-94 T 22-04-2016 YPTB_RS20500 e68a368cb529544c9f0ac8c48709520b 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 3.9E-31 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPTB_RS20500 e68a368cb529544c9f0ac8c48709520b 197 Pfam PF01914 MarC family integral membrane protein 2 193 4.4E-58 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPTB_RS16610 1e4a882dc734941665e657ee718f0417 251 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 44 7.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB_RS16610 1e4a882dc734941665e657ee718f0417 251 Gene3D G3DSA:3.40.1050.10 43 250 5.8E-53 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS16610 1e4a882dc734941665e657ee718f0417 251 SMART SM00947 91 251 7.5E-43 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS16610 1e4a882dc734941665e657ee718f0417 251 PANTHER PTHR11002 13 250 3.0E-176 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS16610 1e4a882dc734941665e657ee718f0417 251 SUPERFAMILY SSF53056 42 250 2.09E-53 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS16610 1e4a882dc734941665e657ee718f0417 251 Pfam PF00484 Carbonic anhydrase 98 247 1.5E-35 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPTB_RS16610 1e4a882dc734941665e657ee718f0417 251 PANTHER PTHR11002:SF22 13 250 3.0E-176 T 22-04-2016 YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 45 186 2.1E-50 T 22-04-2016 YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 PANTHER PTHR10371 14 186 4.9E-123 T 22-04-2016 YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 PANTHER PTHR10371:SF7 14 186 4.9E-123 T 22-04-2016 YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 SUPERFAMILY SSF52833 36 186 4.81E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 Gene3D G3DSA:3.40.30.10 107 185 3.1E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 144 162 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 PIRSF PIRSF000216 17 187 3.8E-53 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YPTB_RS14020 d0e3574cc59526ea2bd82faef160c1e9 187 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 43 186 7.1E-53 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YPTB_RS16285 07ed166dbc220093cd47280be381b8ae 257 SUPERFAMILY SSF55120 2 237 2.56E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS16285 07ed166dbc220093cd47280be381b8ae 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS16285 07ed166dbc220093cd47280be381b8ae 257 PANTHER PTHR11079 3 245 9.4E-95 T 22-04-2016 YPTB_RS16285 07ed166dbc220093cd47280be381b8ae 257 Pfam PF00849 RNA pseudouridylate synthase 10 170 9.3E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPTB_RS16285 07ed166dbc220093cd47280be381b8ae 257 PANTHER PTHR11079:SF60 3 245 9.4E-95 T 22-04-2016 YPTB_RS16845 ca049440be2a2d8a76da24b22d92319b 94 SUPERFAMILY SSF101125 2 89 2.35E-36 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPTB_RS16845 ca049440be2a2d8a76da24b22d92319b 94 Pfam PF09204 Bacterial self-protective colicin-like immunity 1 87 1.7E-34 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPTB_RS17705 dce623d29a130e0e45ffcc37ba72e0ae 459 PANTHER PTHR10283:SF82 9 458 6.2E-136 T 22-04-2016 YPTB_RS17705 dce623d29a130e0e45ffcc37ba72e0ae 459 PANTHER PTHR10283 9 458 6.2E-136 T 22-04-2016 YPTB_RS17705 dce623d29a130e0e45ffcc37ba72e0ae 459 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 40 457 5.3E-113 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS17705 dce623d29a130e0e45ffcc37ba72e0ae 459 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 408 424 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site YPTB_RS17705 dce623d29a130e0e45ffcc37ba72e0ae 459 Pfam PF00939 Sodium:sulfate symporter transmembrane region 27 458 2.0E-53 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPTB_RS12205 b62966106023201cab875f9a7a5b5390 98 ProDom PD580032 SHOCK ACID PRECURSOR SIGNAL 3D-STRUCTURE RESPONSE STRESS SECRETED 1 97 1.0E-15 T 22-04-2016 YPTB_RS02600 3ee73457f2291060dd0db5a004d3f72b 1312 PANTHER PTHR36985 1 215 0.0 T 22-04-2016 YPTB_RS02600 3ee73457f2291060dd0db5a004d3f72b 1312 PANTHER PTHR36985 258 1312 0.0 T 22-04-2016 YPTB_RS02600 3ee73457f2291060dd0db5a004d3f72b 1312 SUPERFAMILY SSF101967 210 266 8.76E-6 T 22-04-2016 YPTB_RS02600 3ee73457f2291060dd0db5a004d3f72b 1312 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 976 1312 1.1E-63 T 22-04-2016 IPR007452 Translocation and assembly module TamB YPTB_RS02600 3ee73457f2291060dd0db5a004d3f72b 1312 Gene3D G3DSA:2.150.10.10 208 266 8.7E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB_RS03410 b56d049c51564f02418a24f9fe948a1f 258 Pfam PF03883 Protein of unknown function (DUF328) 1 242 2.8E-93 T 22-04-2016 IPR005583 Peroxide stress protein YaaA YPTB_RS03410 b56d049c51564f02418a24f9fe948a1f 258 PANTHER PTHR30283 2 254 2.0E-127 T 22-04-2016 YPTB_RS03410 b56d049c51564f02418a24f9fe948a1f 258 PANTHER PTHR30283:SF3 2 254 2.0E-127 T 22-04-2016 YPTB_RS03410 b56d049c51564f02418a24f9fe948a1f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.486 T 22-04-2016 IPR005583 Peroxide stress protein YaaA YPTB_RS09025 6244726f58d9cdc11416b4ebc4c794bb 210 Gene3D G3DSA:3.90.850.10 3 206 6.0E-45 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS09025 6244726f58d9cdc11416b4ebc4c794bb 210 PANTHER PTHR11820 1 204 1.8E-35 T 22-04-2016 YPTB_RS09025 6244726f58d9cdc11416b4ebc4c794bb 210 SUPERFAMILY SSF56529 2 204 3.01E-51 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS09025 6244726f58d9cdc11416b4ebc4c794bb 210 PANTHER PTHR11820:SF8 1 204 1.8E-35 T 22-04-2016 YPTB_RS09025 6244726f58d9cdc11416b4ebc4c794bb 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 5.0E-71 T 22-04-2016 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 YPTB_RS09025 6244726f58d9cdc11416b4ebc4c794bb 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 203 1.9E-31 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS06055 01aaf7c8f5defc60f8b0ebfdc7931188 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 3.4E-28 T 22-04-2016 YPTB_RS06055 01aaf7c8f5defc60f8b0ebfdc7931188 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.333 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPTB_RS06055 01aaf7c8f5defc60f8b0ebfdc7931188 105 PANTHER PTHR21043 1 105 7.6E-48 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPTB_RS06055 01aaf7c8f5defc60f8b0ebfdc7931188 105 SUPERFAMILY SSF81301 4 105 8.66E-37 T 22-04-2016 YPTB_RS06055 01aaf7c8f5defc60f8b0ebfdc7931188 105 Gene3D G3DSA:3.30.460.10 4 105 1.4E-37 T 22-04-2016 YPTB_RS06055 01aaf7c8f5defc60f8b0ebfdc7931188 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.1E-37 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPTB_RS03690 c647ae4bef35264332401bcefab4ff42 255 PANTHER PTHR30353 1 255 4.0E-199 T 22-04-2016 IPR032818 DedA family YPTB_RS03690 c647ae4bef35264332401bcefab4ff42 255 Pfam PF09335 SNARE associated Golgi protein 36 159 1.8E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPTB_RS03690 c647ae4bef35264332401bcefab4ff42 255 PANTHER PTHR30353:SF7 1 255 4.0E-199 T 22-04-2016 YPTB_RS14470 559fea881c050d7e1b6f51d6e95c10ba 181 Gene3D G3DSA:2.60.40.1090 26 181 7.5E-27 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS14470 559fea881c050d7e1b6f51d6e95c10ba 181 SUPERFAMILY SSF49401 27 181 4.97E-24 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS14470 559fea881c050d7e1b6f51d6e95c10ba 181 PANTHER PTHR33420:SF2 1 181 1.6E-108 T 22-04-2016 YPTB_RS14470 559fea881c050d7e1b6f51d6e95c10ba 181 PANTHER PTHR33420 1 181 1.6E-108 T 22-04-2016 YPTB_RS14470 559fea881c050d7e1b6f51d6e95c10ba 181 Pfam PF16970 Type-1 fimbrial protein, A 52 181 3.5E-16 T 22-04-2016 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 Gene3D G3DSA:2.40.50.100 60 94 1.7E-20 T 22-04-2016 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 Gene3D G3DSA:2.40.50.100 215 248 1.7E-20 T 22-04-2016 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 PANTHER PTHR30386 1 376 8.4E-208 T 22-04-2016 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 SUPERFAMILY SSF111369 59 113 1.57E-6 T 22-04-2016 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 1.1E-135 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 3.0E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 PANTHER PTHR30386:SF6 1 376 8.4E-208 T 22-04-2016 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 SUPERFAMILY SSF111369 194 269 1.7E-9 T 22-04-2016 YPTB_RS04775 26394d610b0023b07145eb9ae74686be 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 346 4.3E-15 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 PANTHER PTHR30514:SF4 1 271 1.1E-130 T 22-04-2016 YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 Pfam PF01380 SIS domain 124 247 1.5E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 SUPERFAMILY SSF46689 2 79 1.29E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 Gene3D G3DSA:3.40.50.10490 66 254 4.6E-15 T 22-04-2016 YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 SUPERFAMILY SSF53697 94 253 5.12E-16 T 22-04-2016 YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 71 3.5E-14 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 Gene3D G3DSA:1.10.10.10 1 65 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04815 3821c76837d64381888c99b5d312403b 277 PANTHER PTHR30514 1 271 1.1E-130 T 22-04-2016 YPTB_RS13185 5c6a789d57ded772dad4b0523cfd716e 285 PANTHER PTHR14194:SF73 2 282 1.4E-120 T 22-04-2016 YPTB_RS13185 5c6a789d57ded772dad4b0523cfd716e 285 Pfam PF05368 NmrA-like family 2 220 7.6E-24 T 22-04-2016 IPR008030 NmrA-like domain YPTB_RS13185 5c6a789d57ded772dad4b0523cfd716e 285 SUPERFAMILY SSF51735 2 245 6.59E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13185 5c6a789d57ded772dad4b0523cfd716e 285 Gene3D G3DSA:3.40.50.720 2 217 6.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS13185 5c6a789d57ded772dad4b0523cfd716e 285 PANTHER PTHR14194 2 282 1.4E-120 T 22-04-2016 YPTB_RS10650 83ae588b10f82e5521806fef31f7d46f 175 Pfam PF10634 Fe2+ transport protein 25 173 3.8E-70 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type YPTB_RS10650 83ae588b10f82e5521806fef31f7d46f 175 PIRSF PIRSF017018 1 175 1.1E-73 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type YPTB_RS08920 828d02213c49c16c0c8bd65bdcbe362d 77 Pfam PF13996 YobH-like protein 3 70 1.3E-34 T 22-04-2016 IPR025611 YobH-like protein YPTB_RS14550 4a1fdf63356f82c47dc937722538b704 159 SUPERFAMILY SSF141452 2 158 6.15E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS14550 4a1fdf63356f82c47dc937722538b704 159 Gene3D G3DSA:2.30.110.20 1 152 9.8E-23 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS14550 4a1fdf63356f82c47dc937722538b704 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 1.3E-23 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS14550 4a1fdf63356f82c47dc937722538b704 159 PANTHER PTHR34319 1 159 2.9E-80 T 22-04-2016 YPTB_RS14550 4a1fdf63356f82c47dc937722538b704 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 4.7E-60 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 SUPERFAMILY SSF103473 251 450 1.01E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 SUPERFAMILY SSF103473 8 195 1.01E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 5.2E-10 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 5.2E-10 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 268 293 5.2E-10 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 5.2E-10 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 5.2E-10 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 5.2E-10 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PANTHER PTHR23501:SF5 6 454 8.6E-167 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 PANTHER PTHR23501 6 454 8.6E-167 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 Pfam PF07690 Major Facilitator Superfamily 21 412 2.2E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 Gene3D G3DSA:1.20.1250.20 14 195 1.4E-26 T 22-04-2016 YPTB_RS12895 efe44f4905d55dbd9dbc797d4c82a9e1 455 Gene3D G3DSA:1.20.1250.20 264 449 2.4E-18 T 22-04-2016 YPTB_RS18175 11c44e8345e4dc7c07cb67e5ba8f372f 826 Pfam PF00577 Outer membrane usher protein 187 740 5.1E-167 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS18175 11c44e8345e4dc7c07cb67e5ba8f372f 826 PANTHER PTHR30451:SF10 1 826 0.0 T 22-04-2016 YPTB_RS18175 11c44e8345e4dc7c07cb67e5ba8f372f 826 Pfam PF13953 PapC C-terminal domain 749 807 2.1E-12 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPTB_RS18175 11c44e8345e4dc7c07cb67e5ba8f372f 826 Pfam PF13954 PapC N-terminal domain 27 170 1.2E-39 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPTB_RS18175 11c44e8345e4dc7c07cb67e5ba8f372f 826 PANTHER PTHR30451 1 826 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPTB_RS18175 11c44e8345e4dc7c07cb67e5ba8f372f 826 SUPERFAMILY SSF141729 25 145 1.83E-30 T 22-04-2016 YPTB_RS17520 ca7107cae1a84bfe028077c104df5c9f 211 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 40 180 5.1E-52 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPTB_RS17520 ca7107cae1a84bfe028077c104df5c9f 211 PANTHER PTHR32305:SF7 2 211 7.0E-105 T 22-04-2016 YPTB_RS17520 ca7107cae1a84bfe028077c104df5c9f 211 PANTHER PTHR32305 2 211 7.0E-105 T 22-04-2016 YPTB_RS15720 93965d6c7d19a642b52bc351940979ac 316 PANTHER PTHR18866 139 261 2.5E-49 T 22-04-2016 YPTB_RS15720 93965d6c7d19a642b52bc351940979ac 316 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 307 3.7E-119 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YPTB_RS15720 93965d6c7d19a642b52bc351940979ac 316 Pfam PF02626 Allophanate hydrolase subunit 2 24 281 2.9E-90 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YPTB_RS15720 93965d6c7d19a642b52bc351940979ac 316 SUPERFAMILY SSF50891 173 288 1.14E-11 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS15720 93965d6c7d19a642b52bc351940979ac 316 SMART SM00797 23 298 3.6E-146 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YPTB_RS15720 93965d6c7d19a642b52bc351940979ac 316 Gene3D G3DSA:2.40.100.10 174 295 4.4E-6 T 22-04-2016 IPR029000 Cyclophilin-like domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Gene3D G3DSA:3.30.300.30 1087 1131 1.3E-25 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Gene3D G3DSA:3.30.300.30 1472 1527 1.3E-25 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Gene3D G3DSA:1.10.1200.10 1572 1646 2.2E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Gene3D G3DSA:1.10.1200.10 138 201 3.3E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF52777 1867 2108 1.11E-45 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF52777 411 650 1.67E-39 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF56801 1479 1529 4.84E-123 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF56801 672 1145 4.84E-123 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Pfam PF00668 Condensation domain 233 525 4.2E-34 T 22-04-2016 IPR001242 Condensation domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Pfam PF00668 Condensation domain 1702 1978 2.2E-39 T 22-04-2016 IPR001242 Condensation domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Gene3D G3DSA:3.40.50.980 681 841 2.0E-36 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 PANTHER PTHR24096 592 1161 0.0 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 PANTHER PTHR24096 1495 1570 0.0 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1601 1616 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Pfam PF00501 AMP-binding enzyme 688 1092 1.6E-86 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF47336 135 207 3.4E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF47336 1575 1642 1.83E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Gene3D G3DSA:3.40.50.980 842 996 4.5E-35 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF52777 236 406 7.67E-19 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Pfam PF00550 Phosphopantetheine attachment site 1581 1640 3.4E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Pfam PF00550 Phosphopantetheine attachment site 137 200 4.1E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 709 1117 2.5E-116 T 22-04-2016 IPR010071 Amino acid adenylation domain YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Pfam PF08415 Nonribosomal peptide synthase 548 600 5.0E-12 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Pfam PF08415 Nonribosomal peptide synthase 2003 2058 1.2E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 PANTHER PTHR24096:SF247 592 1161 0.0 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 PANTHER PTHR24096:SF247 1495 1570 0.0 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 Gene3D G3DSA:2.30.38.10 1007 1083 4.8E-21 T 22-04-2016 YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 ProSitePatterns PS00455 Putative AMP-binding domain signature. 836 847 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPTB_RS17840 cd6cabc97d212286fff452711b0451fc 2167 SUPERFAMILY SSF52777 1722 1877 9.78E-24 T 22-04-2016 YPTB_RS10495 f163c2f455cdb535120dbe7a4298815e 337 SUPERFAMILY SSF51735 3 153 1.62E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10495 f163c2f455cdb535120dbe7a4298815e 337 PANTHER PTHR22604 1 337 1.6E-111 T 22-04-2016 YPTB_RS10495 f163c2f455cdb535120dbe7a4298815e 337 SUPERFAMILY SSF55347 130 303 1.96E-20 T 22-04-2016 YPTB_RS10495 f163c2f455cdb535120dbe7a4298815e 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 125 1.3E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS10495 f163c2f455cdb535120dbe7a4298815e 337 Gene3D G3DSA:3.40.50.720 2 138 3.0E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS10495 f163c2f455cdb535120dbe7a4298815e 337 Gene3D G3DSA:3.30.360.10 139 337 3.4E-35 T 22-04-2016 YPTB_RS10495 f163c2f455cdb535120dbe7a4298815e 337 PANTHER PTHR22604:SF92 1 337 1.6E-111 T 22-04-2016 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 SUPERFAMILY SSF53807 29 318 2.99E-78 T 22-04-2016 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 PANTHER PTHR30477:SF1 1 117 1.3E-107 T 22-04-2016 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 PANTHER PTHR30477:SF1 138 302 1.3E-107 T 22-04-2016 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 Gene3D G3DSA:3.40.50.1980 29 207 8.9E-42 T 22-04-2016 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 314 5.9E-57 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 Gene3D G3DSA:3.40.50.1980 208 318 5.1E-30 T 22-04-2016 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 PANTHER PTHR30477 1 117 1.3E-107 T 22-04-2016 YPTB_RS11205 8d776790cd53a421b8d99fc477ebe240 318 PANTHER PTHR30477 138 302 1.3E-107 T 22-04-2016 YPTB_RS11110 c101639a2ecc6e8517525acc00fce2c1 309 SUPERFAMILY SSF55347 132 271 8.5E-46 T 22-04-2016 YPTB_RS11110 c101639a2ecc6e8517525acc00fce2c1 309 Gene3D G3DSA:3.40.50.720 6 135 1.6E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11110 c101639a2ecc6e8517525acc00fce2c1 309 PANTHER PTHR22604:SF126 1 309 9.8E-155 T 22-04-2016 YPTB_RS11110 c101639a2ecc6e8517525acc00fce2c1 309 SUPERFAMILY SSF51735 9 143 7.34E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS11110 c101639a2ecc6e8517525acc00fce2c1 309 PANTHER PTHR22604 1 309 9.8E-155 T 22-04-2016 YPTB_RS11110 c101639a2ecc6e8517525acc00fce2c1 309 Gene3D G3DSA:3.30.360.10 136 309 1.1E-67 T 22-04-2016 YPTB_RS11110 c101639a2ecc6e8517525acc00fce2c1 309 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 127 6.7E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 PANTHER PTHR12338:SF5 1 940 1.4E-190 T 22-04-2016 YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 SUPERFAMILY SSF51126 10 423 9.73E-44 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 Pfam PF03797 Autotransporter beta-domain 664 925 2.6E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 Gene3D G3DSA:2.40.128.130 625 940 3.6E-67 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 PANTHER PTHR12338 1 940 1.4E-190 T 22-04-2016 YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 Pfam PF03212 Pertactin 306 422 1.8E-6 T 22-04-2016 IPR004899 Pertactin, central region YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 542 940 1.5E-67 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 316 452 2.2E-23 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 SMART SM00869 666 929 2.2E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 Gene3D G3DSA:2.160.20.20 14 423 1.6E-50 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPTB_RS18790 656349fa8869fdb0d8d99b2a6bf01a3b 940 SUPERFAMILY SSF103515 632 940 8.37E-39 T 22-04-2016 IPR005546 Autotransporter beta-domain YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 9.8E-71 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PANTHER PTHR11652 1 116 2.2E-77 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 SUPERFAMILY SSF50249 3 123 2.23E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 2.2E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 Gene3D G3DSA:2.40.50.140 1 123 1.2E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PIRSF PIRSF002133 1 124 1.6E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.507 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS20050 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 Gene3D G3DSA:3.10.450.50 3 154 9.5E-52 T 22-04-2016 IPR032710 NTF2-like domain YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 Pfam PF02810 SEC-C motif 136 154 4.8E-8 T 22-04-2016 IPR004027 SEC-C motif YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 Pfam PF02810 SEC-C motif 2 19 2.9E-6 T 22-04-2016 IPR004027 SEC-C motif YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 SUPERFAMILY SSF54427 25 130 5.08E-34 T 22-04-2016 IPR032710 NTF2-like domain YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 SUPERFAMILY SSF103642 134 153 1.24E-6 T 22-04-2016 YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 28.725 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 PANTHER PTHR33747 2 154 8.2E-38 T 22-04-2016 YPTB_RS11490 22a76be64241a10863e13fb6db212106 154 PANTHER PTHR33747:SF1 2 154 8.2E-38 T 22-04-2016 YPTB_RS05240 92a5675e64e2f773b8f1be1b1c4863e0 196 PANTHER PTHR11019:SF4 1 194 2.2E-75 T 22-04-2016 YPTB_RS05240 92a5675e64e2f773b8f1be1b1c4863e0 196 SUPERFAMILY SSF52317 5 189 8.46E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS05240 92a5675e64e2f773b8f1be1b1c4863e0 196 Gene3D G3DSA:3.40.50.880 4 189 1.2E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS05240 92a5675e64e2f773b8f1be1b1c4863e0 196 Pfam PF01965 DJ-1/PfpI family 4 169 2.4E-45 T 22-04-2016 IPR002818 DJ-1/PfpI YPTB_RS05240 92a5675e64e2f773b8f1be1b1c4863e0 196 PANTHER PTHR11019 1 194 2.2E-75 T 22-04-2016 YPTB_RS05240 92a5675e64e2f773b8f1be1b1c4863e0 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 182 2.6E-65 T 22-04-2016 IPR006287 DJ-1 YPTB_RS14825 bd6b4657198711e60e3dc24f8841f69d 345 Gene3D G3DSA:3.40.190.10 33 175 4.2E-43 T 22-04-2016 YPTB_RS14825 bd6b4657198711e60e3dc24f8841f69d 345 Gene3D G3DSA:3.40.190.10 184 308 3.9E-27 T 22-04-2016 YPTB_RS14825 bd6b4657198711e60e3dc24f8841f69d 345 PANTHER PTHR30368 16 345 6.4E-265 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPTB_RS14825 bd6b4657198711e60e3dc24f8841f69d 345 SUPERFAMILY SSF53850 32 339 1.41E-78 T 22-04-2016 YPTB_RS14825 bd6b4657198711e60e3dc24f8841f69d 345 Pfam PF13531 Bacterial extracellular solute-binding protein 48 293 2.8E-41 T 22-04-2016 YPTB_RS14825 bd6b4657198711e60e3dc24f8841f69d 345 PANTHER PTHR30368:SF1 16 345 6.4E-265 T 22-04-2016 YPTB_RS14825 bd6b4657198711e60e3dc24f8841f69d 345 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 27 339 8.3E-159 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPTB_RS19360 814a52c99a008fd444c5eb35173dabaa 131 Gene3D G3DSA:1.20.1290.10 5 123 8.2E-23 T 22-04-2016 IPR029032 AhpD-like YPTB_RS19360 814a52c99a008fd444c5eb35173dabaa 131 PANTHER PTHR33570:SF2 1 129 2.9E-62 T 22-04-2016 YPTB_RS19360 814a52c99a008fd444c5eb35173dabaa 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 118 4.9E-23 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YPTB_RS19360 814a52c99a008fd444c5eb35173dabaa 131 PANTHER PTHR33570 1 129 2.9E-62 T 22-04-2016 YPTB_RS19360 814a52c99a008fd444c5eb35173dabaa 131 SUPERFAMILY SSF69118 2 125 1.83E-34 T 22-04-2016 IPR029032 AhpD-like YPTB_RS05185 ad04a9c4e9eb6d14471c207a0dc82de9 149 Pfam PF03477 ATP cone domain 50 136 5.8E-16 T 22-04-2016 IPR005144 ATP-cone domain YPTB_RS05185 ad04a9c4e9eb6d14471c207a0dc82de9 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.723 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YPTB_RS05185 ad04a9c4e9eb6d14471c207a0dc82de9 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.5E-75 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YPTB_RS05185 ad04a9c4e9eb6d14471c207a0dc82de9 149 PANTHER PTHR30455:SF2 2 149 6.3E-74 T 22-04-2016 YPTB_RS05185 ad04a9c4e9eb6d14471c207a0dc82de9 149 PANTHER PTHR30455 2 149 6.3E-74 T 22-04-2016 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 Pfam PF00155 Aminotransferase class I and II 149 460 1.1E-24 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 Gene3D G3DSA:3.40.640.10 169 384 2.1E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 PANTHER PTHR11751:SF10 131 494 5.3E-144 T 22-04-2016 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 SMART SM00345 29 88 1.3E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 SUPERFAMILY SSF46785 26 90 5.07E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 3.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 3.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 SUPERFAMILY SSF53383 136 493 8.39E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 88 4.1E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 PANTHER PTHR11751 131 494 5.3E-144 T 22-04-2016 YPTB_RS15215 8a064dde8abd7b531a8a5c04668a5a60 501 Gene3D G3DSA:1.10.10.10 25 89 3.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04855 3fa33cf3b99148ea0d580e705154207b 256 Gene3D G3DSA:3.60.110.10 1 252 4.5E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS04855 3fa33cf3b99148ea0d580e705154207b 256 SUPERFAMILY SSF56317 1 249 9.16E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS04855 3fa33cf3b99148ea0d580e705154207b 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 1.3E-28 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS04855 3fa33cf3b99148ea0d580e705154207b 256 PANTHER PTHR23088:SF28 1 252 3.4E-130 T 22-04-2016 YPTB_RS04855 3fa33cf3b99148ea0d580e705154207b 256 PANTHER PTHR23088 1 252 3.4E-130 T 22-04-2016 YPTB_RS15790 a6775f88d4835f7d8a90dc4ff8a02fab 142 SUPERFAMILY SSF103481 41 141 2.48E-14 T 22-04-2016 YPTB_RS15790 a6775f88d4835f7d8a90dc4ff8a02fab 142 Pfam PF00892 EamA-like transporter family 4 140 2.6E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS15790 a6775f88d4835f7d8a90dc4ff8a02fab 142 PANTHER PTHR22911 4 140 6.3E-28 T 22-04-2016 YPTB_RS15180 e11a7162a20d6d7943b3d6c320edebc8 62 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 2 49 1.0E-19 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 YPTB_RS15180 e11a7162a20d6d7943b3d6c320edebc8 62 Pfam PF11119 Protein of unknown function (DUF2633) 1 56 2.4E-32 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 YPTB_RS01240 fc4b50b4af3fdedc41e69cf8094c8395 399 Pfam PF03272 Putative mucin or carbohydrate-binding module 37 140 2.8E-12 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPTB_RS01240 fc4b50b4af3fdedc41e69cf8094c8395 399 Pfam PF03272 Putative mucin or carbohydrate-binding module 230 341 1.4E-30 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPTB_RS04960 3c54df59644a75c3a8646651cde6b951 331 Pfam PF02424 ApbE family 24 300 4.2E-85 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 YPTB_RS04960 3c54df59644a75c3a8646651cde6b951 331 PANTHER PTHR30040:SF3 1 331 4.1E-185 T 22-04-2016 YPTB_RS04960 3c54df59644a75c3a8646651cde6b951 331 SUPERFAMILY SSF143631 16 327 1.65E-103 T 22-04-2016 IPR003374 ApbE-like domain YPTB_RS04960 3c54df59644a75c3a8646651cde6b951 331 PIRSF PIRSF006268 10 328 2.1E-92 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 YPTB_RS04960 3c54df59644a75c3a8646651cde6b951 331 PANTHER PTHR30040 1 331 4.1E-185 T 22-04-2016 YPTB_RS01410 4d07a130f9b406fa902489883e4bfb4a 294 Gene3D G3DSA:1.10.3720.10 61 291 6.3E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS01410 4d07a130f9b406fa902489883e4bfb4a 294 PANTHER PTHR32243:SF13 5 293 4.3E-116 T 22-04-2016 YPTB_RS01410 4d07a130f9b406fa902489883e4bfb4a 294 PANTHER PTHR32243 5 293 4.3E-116 T 22-04-2016 YPTB_RS01410 4d07a130f9b406fa902489883e4bfb4a 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 293 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS01410 4d07a130f9b406fa902489883e4bfb4a 294 SUPERFAMILY SSF161098 56 283 2.49E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS05260 b1d095d7abde1282fc5c84108e80ec16 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site YPTB_RS05260 b1d095d7abde1282fc5c84108e80ec16 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.338 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 YPTB_RS05260 b1d095d7abde1282fc5c84108e80ec16 295 Pfam PF01040 UbiA prenyltransferase family 18 266 1.8E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YPTB_RS05260 b1d095d7abde1282fc5c84108e80ec16 295 PANTHER PTHR11048:SF20 1 287 1.8E-159 T 22-04-2016 YPTB_RS05260 b1d095d7abde1282fc5c84108e80ec16 295 PANTHER PTHR11048 1 287 1.8E-159 T 22-04-2016 YPTB_RS05260 b1d095d7abde1282fc5c84108e80ec16 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 2.3E-91 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 YPTB_RS15685 85a549ccf3f5af4bae1fd26228deb64d 320 PANTHER PTHR35243 106 320 5.0E-44 T 22-04-2016 YPTB_RS15685 85a549ccf3f5af4bae1fd26228deb64d 320 Pfam PF11187 Protein of unknown function (DUF2974) 134 208 7.3E-5 T 22-04-2016 IPR024499 Protein of unknown function DUF2974 YPTB_RS15685 85a549ccf3f5af4bae1fd26228deb64d 320 PANTHER PTHR35243:SF2 106 320 5.0E-44 T 22-04-2016 YPTB_RS15685 85a549ccf3f5af4bae1fd26228deb64d 320 SUPERFAMILY SSF53474 87 229 1.39E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS15685 85a549ccf3f5af4bae1fd26228deb64d 320 Gene3D G3DSA:3.40.50.1820 137 285 2.6E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 2.2E-28 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 PANTHER PTHR22936 1 275 2.9E-105 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 SUPERFAMILY SSF144091 94 271 5.75E-43 T 22-04-2016 YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 PANTHER PTHR22936:SF30 1 275 2.9E-105 T 22-04-2016 YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 Gene3D G3DSA:1.20.1540.10 96 268 1.9E-35 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 277 52.165 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 9.4E-121 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YPTB_RS20425 cdbb5fa6976acf27367f7ff1dc4906c2 278 Pfam PF01694 Rhomboid family 132 271 8.9E-30 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YPTB_RS12135 d25d4a46bcfc594342ba9ec62b796d90 464 PANTHER PTHR10160 4 464 6.2E-253 T 22-04-2016 YPTB_RS12135 d25d4a46bcfc594342ba9ec62b796d90 464 SUPERFAMILY SSF52467 289 463 5.61E-77 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS12135 d25d4a46bcfc594342ba9ec62b796d90 464 Gene3D G3DSA:3.40.50.1220 288 463 4.3E-91 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPTB_RS12135 d25d4a46bcfc594342ba9ec62b796d90 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.9E-199 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 YPTB_RS12135 d25d4a46bcfc594342ba9ec62b796d90 464 PIRSF PIRSF000204 1 464 1.6E-238 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 YPTB_RS08280 457d53bdc8541a340440c1c219f89afd 200 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 36 181 1.1E-24 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS08280 457d53bdc8541a340440c1c219f89afd 200 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 39 191 8.2E-40 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPTB_RS08280 457d53bdc8541a340440c1c219f89afd 200 PANTHER PTHR37625 32 200 3.0E-89 T 22-04-2016 YPTB_RS08280 457d53bdc8541a340440c1c219f89afd 200 PANTHER PTHR37625:SF1 32 200 3.0E-89 T 22-04-2016 YPTB_RS16415 4ebb10d7718c05d751cb0cce9ab05faf 189 SUPERFAMILY SSF54523 37 178 1.26E-12 T 22-04-2016 YPTB_RS16415 4ebb10d7718c05d751cb0cce9ab05faf 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 33 54 1.1E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS09940 f26f856c43392b78a6783c1d04f41f4b 70 PIRSF PIRSF030786 1 70 2.0E-42 T 22-04-2016 IPR007054 Lysis protein S YPTB_RS09940 f26f856c43392b78a6783c1d04f41f4b 70 Pfam PF04971 Bacteriophage P21 holin S 3 70 1.8E-32 T 22-04-2016 IPR007054 Lysis protein S YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 PANTHER PTHR30435:SF19 1 260 2.2E-136 T 22-04-2016 YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 3.4E-118 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 9.6E-27 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 SUPERFAMILY SSF117143 93 222 7.59E-36 T 22-04-2016 YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 2.5E-29 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.4E-49 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.6E-14 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS09235 c776d8f9a6588da3d494b0edbf55fc92 260 PANTHER PTHR30435 1 260 2.2E-136 T 22-04-2016 YPTB_RS09320 31a10b3f50118d0d0aa70f6fb06e90ae 189 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 81 149 6.2E-22 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YPTB_RS09320 31a10b3f50118d0d0aa70f6fb06e90ae 189 PANTHER PTHR38766:SF1 66 189 1.7E-40 T 22-04-2016 YPTB_RS09320 31a10b3f50118d0d0aa70f6fb06e90ae 189 Pfam PF04347 Flagellar biosynthesis protein, FliO 93 183 4.8E-21 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YPTB_RS09320 31a10b3f50118d0d0aa70f6fb06e90ae 189 PANTHER PTHR38766 66 189 1.7E-40 T 22-04-2016 YPTB_RS06825 3496d1c94e6480b633115abd88ccfc65 285 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 175 273 4.4E-7 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 YPTB_RS06825 3496d1c94e6480b633115abd88ccfc65 285 PIRSF PIRSF030125 7 285 8.2E-109 T 22-04-2016 IPR016946 Uncharacterised conserved protein UCP030125 YPTB_RS20660 7608a11537e8902600dffec89e115ef2 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.2E-166 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPTB_RS20660 7608a11537e8902600dffec89e115ef2 378 PIRSF PIRSF006078 1 377 8.1E-143 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPTB_RS20660 7608a11537e8902600dffec89e115ef2 378 PANTHER PTHR21599:SF4 1 377 7.9E-273 T 22-04-2016 YPTB_RS20660 7608a11537e8902600dffec89e115ef2 378 SUPERFAMILY SSF110738 1 376 1.7E-146 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPTB_RS20660 7608a11537e8902600dffec89e115ef2 378 Gene3D G3DSA:3.90.1510.10 42 275 1.3E-99 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 YPTB_RS20660 7608a11537e8902600dffec89e115ef2 378 PANTHER PTHR21599 1 377 7.9E-273 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPTB_RS20660 7608a11537e8902600dffec89e115ef2 378 Pfam PF02595 Glycerate kinase family 3 374 8.1E-153 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPTB_RS02825 f9cf3924613a8fab378cf5825a4631ab 331 SUPERFAMILY SSF51391 11 160 3.66E-5 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPTB_RS02825 f9cf3924613a8fab378cf5825a4631ab 331 Pfam PF01136 Peptidase family U32 76 330 1.7E-67 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS02825 f9cf3924613a8fab378cf5825a4631ab 331 PANTHER PTHR30217 240 330 2.0E-226 T 22-04-2016 YPTB_RS02825 f9cf3924613a8fab378cf5825a4631ab 331 PANTHER PTHR30217 1 218 2.0E-226 T 22-04-2016 YPTB_RS02825 f9cf3924613a8fab378cf5825a4631ab 331 PANTHER PTHR30217:SF3 240 330 2.0E-226 T 22-04-2016 YPTB_RS02825 f9cf3924613a8fab378cf5825a4631ab 331 PANTHER PTHR30217:SF3 1 218 2.0E-226 T 22-04-2016 YPTB_RS02825 f9cf3924613a8fab378cf5825a4631ab 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PANTHER PTHR24093:SF254 1 904 0.0 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SMART SM00831 18 91 7.0E-34 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81653 128 238 1.23E-30 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 335 655 7.6E-24 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00689 Cation transporting ATPase, C-terminus 726 897 1.6E-42 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:2.70.150.10 124 238 2.8E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:2.70.150.10 33 70 2.8E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00122 E1-E2 ATPase 96 330 4.8E-67 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF56784 337 357 7.5E-62 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF56784 495 744 7.5E-62 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 341 347 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 230 360 5.8E-23 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 730 4.9E-35 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 98 204 2.9E-20 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:1.20.1110.10 610 898 3.8E-104 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:1.20.1110.10 71 123 3.8E-104 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:3.40.1110.10 329 547 2.2E-50 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 85 2.8E-21 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 673 698 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 657 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 498 516 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 613 629 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81665 18 129 5.1E-119 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81665 239 333 5.1E-119 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81665 691 901 5.1E-119 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81660 346 544 6.54E-46 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 1.3E-40 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 551 1.3E-40 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 572 1.3E-40 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 1.3E-40 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 677 1.3E-40 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 660 1.3E-40 T 22-04-2016 YPTB_RS03355 c820b15ed53f4f8d901d4ae6e251c616 908 PANTHER PTHR24093 1 904 0.0 T 22-04-2016 YPTB_RS08350 956d1efa252d9e477ab3c435d069e752 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 3.6E-120 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 YPTB_RS08350 956d1efa252d9e477ab3c435d069e752 280 PANTHER PTHR10061 4 280 4.9E-178 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 YPTB_RS08350 956d1efa252d9e477ab3c435d069e752 280 Gene3D G3DSA:3.40.50.1820 5 279 1.6E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08350 956d1efa252d9e477ab3c435d069e752 280 Pfam PF00756 Putative esterase 26 261 8.0E-69 T 22-04-2016 IPR000801 Putative esterase YPTB_RS08350 956d1efa252d9e477ab3c435d069e752 280 SUPERFAMILY SSF53474 5 278 6.18E-88 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS19125 4ab295a4cb80c05ece8157dcdac214a5 158 SUPERFAMILY SSF69318 40 109 2.35E-7 T 22-04-2016 YPTB_RS19125 4ab295a4cb80c05ece8157dcdac214a5 158 Pfam PF16743 Periplasmic lysozyme inhibitor of I-type lysozyme 25 147 4.6E-43 T 22-04-2016 IPR031948 Periplasmic lysozyme inhibitor of I-type lysozyme YPTB_RS14860 1c29aec0bde95ae4bddf2754ab1b0e73 207 PANTHER PTHR36204:SF1 1 206 4.6E-105 T 22-04-2016 YPTB_RS14860 1c29aec0bde95ae4bddf2754ab1b0e73 207 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 7 198 1.6E-81 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 YPTB_RS14860 1c29aec0bde95ae4bddf2754ab1b0e73 207 SUPERFAMILY SSF51366 4 196 1.15E-47 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPTB_RS14860 1c29aec0bde95ae4bddf2754ab1b0e73 207 Gene3D G3DSA:3.20.20.70 1 199 1.2E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS14860 1c29aec0bde95ae4bddf2754ab1b0e73 207 PANTHER PTHR36204 1 206 4.6E-105 T 22-04-2016 YPTB_RS12420 50ee570cc0dc1171a3bce4fd3aa2ef06 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 5.9E-47 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 YPTB_RS13965 c30b1dfab3c434c887134943e35e1911 155 PANTHER PTHR34986 2 155 2.9E-98 T 22-04-2016 YPTB_RS13965 c30b1dfab3c434c887134943e35e1911 155 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.4E-38 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS13965 c30b1dfab3c434c887134943e35e1911 155 Gene3D G3DSA:2.60.120.370 1 153 4.2E-43 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS13965 c30b1dfab3c434c887134943e35e1911 155 SUPERFAMILY SSF51197 1 154 3.84E-41 T 22-04-2016 YPTB_RS13965 c30b1dfab3c434c887134943e35e1911 155 PANTHER PTHR34986:SF3 2 155 2.9E-98 T 22-04-2016 YPTB_RS13965 c30b1dfab3c434c887134943e35e1911 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 154 6.8E-36 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 Pfam PF06418 CTP synthase N-terminus 5 266 6.7E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 SUPERFAMILY SSF52540 3 269 4.91E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 SUPERFAMILY SSF52317 289 541 2.37E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 7.5E-264 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.9E-63 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 Gene3D G3DSA:3.40.50.300 1 280 6.8E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.207 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YPTB_RS04195 a8086cd4f4824af07e2ec76f949ecd81 545 Gene3D G3DSA:3.40.50.880 289 541 3.2E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 Pfam PF00245 Alkaline phosphatase 75 440 4.8E-118 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 SMART SM00098 75 481 5.1E-189 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 ProSitePatterns PS00123 Alkaline phosphatase active site. 131 139 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596 2 304 2.6E-148 T 22-04-2016 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596 327 480 2.6E-148 T 22-04-2016 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 330 359 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 131 146 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 168 188 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 231 241 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 74 94 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 Gene3D G3DSA:3.40.720.10 57 480 5.8E-134 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596:SF5 2 304 2.6E-148 T 22-04-2016 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596:SF5 327 480 2.6E-148 T 22-04-2016 YPTB_RS12115 8d5a0c3a0cf248f594509bf0608e7d8d 481 SUPERFAMILY SSF53649 47 480 8.51E-132 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS11050 58af5063cfad87fac91972257b283b37 278 SUPERFAMILY SSF161098 8 270 5.36E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11050 58af5063cfad87fac91972257b283b37 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 262 1.7E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11050 58af5063cfad87fac91972257b283b37 278 Gene3D G3DSA:1.10.3720.10 18 267 1.4E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11050 58af5063cfad87fac91972257b283b37 278 PANTHER PTHR32243:SF39 2 277 1.0E-215 T 22-04-2016 YPTB_RS11050 58af5063cfad87fac91972257b283b37 278 PANTHER PTHR32243 2 277 1.0E-215 T 22-04-2016 YPTB_RS00930 dbc69df1bf754dfe37d8c42876955855 87 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 10 85 4.0E-39 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00930 dbc69df1bf754dfe37d8c42876955855 87 SUPERFAMILY SSF47345 1 86 4.97E-36 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00930 dbc69df1bf754dfe37d8c42876955855 87 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 41 57 1.9E-23 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00930 dbc69df1bf754dfe37d8c42876955855 87 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 64 85 1.9E-23 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00930 dbc69df1bf754dfe37d8c42876955855 87 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 4 22 1.9E-23 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPTB_RS00930 dbc69df1bf754dfe37d8c42876955855 87 Gene3D G3DSA:1.10.1200.20 1 86 1.6E-35 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS00930 dbc69df1bf754dfe37d8c42876955855 87 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 85 1.6E-33 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 PANTHER PTHR11985:SF14 1 540 0.0 T 22-04-2016 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 PANTHER PTHR11985 1 540 0.0 T 22-04-2016 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 Pfam PF01266 FAD dependent oxidoreductase 11 360 4.7E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 SUPERFAMILY SSF51905 10 323 6.12E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 540 4.6E-268 T 22-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 Gene3D G3DSA:3.30.9.10 217 317 1.2E-8 T 22-04-2016 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 484 1.5E-9 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 380 472 1.6E-7 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 Gene3D G3DSA:3.50.50.60 140 216 3.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS01255 8fe06e2e7d7fdb25e62a22bd8237154c 551 Gene3D G3DSA:3.50.50.60 4 101 3.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPTB_RS17660 29a4218209804d2abee0160c8ae4d711 407 PANTHER PTHR23546 2 407 5.9E-128 T 22-04-2016 YPTB_RS17660 29a4218209804d2abee0160c8ae4d711 407 SUPERFAMILY SSF103473 20 396 1.83E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS17660 29a4218209804d2abee0160c8ae4d711 407 PANTHER PTHR23546:SF1 2 407 5.9E-128 T 22-04-2016 YPTB_RS17660 29a4218209804d2abee0160c8ae4d711 407 Gene3D G3DSA:1.20.1250.20 19 205 2.1E-16 T 22-04-2016 YPTB_RS17660 29a4218209804d2abee0160c8ae4d711 407 Gene3D G3DSA:1.20.1250.20 214 396 2.0E-6 T 22-04-2016 YPTB_RS17660 29a4218209804d2abee0160c8ae4d711 407 Pfam PF07690 Major Facilitator Superfamily 22 360 6.3E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS19415 27ea5951661b020eae6beb0acfd2d8c6 448 PANTHER PTHR37957 1 446 6.1E-178 T 22-04-2016 YPTB_RS19415 27ea5951661b020eae6beb0acfd2d8c6 448 Pfam PF13449 Esterase-like activity of phytase 90 421 2.9E-67 T 22-04-2016 IPR027372 Phytase-like domain YPTB_RS19415 27ea5951661b020eae6beb0acfd2d8c6 448 SUPERFAMILY SSF63829 96 113 8.5E-6 T 22-04-2016 YPTB_RS19415 27ea5951661b020eae6beb0acfd2d8c6 448 SUPERFAMILY SSF63829 242 297 8.5E-6 T 22-04-2016 YPTB_RS19415 27ea5951661b020eae6beb0acfd2d8c6 448 SUPERFAMILY SSF63829 145 210 8.5E-6 T 22-04-2016 YPTB_RS11650 59ec54618662618ad0eb8e6f8f44f675 20 Pfam PF08255 Trp-operon Leader Peptide 2 15 6.6E-7 T 22-04-2016 IPR013205 Leader peptide, tryptophan-operon YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 SUPERFAMILY SSF101790 245 326 2.68E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 181 2.9E-7 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 PANTHER PTHR22602:SF0 1 319 1.9E-82 T 22-04-2016 YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 SUPERFAMILY SSF103025 19 243 5.97E-65 T 22-04-2016 YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 PANTHER PTHR22602 1 319 1.9E-82 T 22-04-2016 YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 188 253 2.2E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 Gene3D G3DSA:3.30.70.1400 28 112 1.2E-31 T 22-04-2016 YPTB_RS17195 9e3f2d97126a7bbdd1466a593de5521a 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 50.858 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 YPTB_RS08430 1b6a0acf42377810ce74080c2599727e 358 SUPERFAMILY SSF53822 40 305 1.53E-38 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS08430 1b6a0acf42377810ce74080c2599727e 358 Gene3D G3DSA:3.40.50.2300 163 294 2.9E-16 T 22-04-2016 YPTB_RS08430 1b6a0acf42377810ce74080c2599727e 358 Pfam PF13407 Periplasmic binding protein domain 55 301 8.6E-26 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS08430 1b6a0acf42377810ce74080c2599727e 358 Gene3D G3DSA:3.40.50.2300 37 162 3.7E-19 T 22-04-2016 YPTB_RS08940 b0a5d474077e23f905507b5ccf2b4c67 457 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS08940 b0a5d474077e23f905507b5ccf2b4c67 457 PANTHER PTHR11785 1 449 4.4E-285 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS08940 b0a5d474077e23f905507b5ccf2b4c67 457 Pfam PF00324 Amino acid permease 18 445 4.1E-118 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS08940 b0a5d474077e23f905507b5ccf2b4c67 457 PANTHER PTHR11785:SF26 1 449 4.4E-285 T 22-04-2016 YPTB_RS08940 b0a5d474077e23f905507b5ccf2b4c67 457 PIRSF PIRSF006060 1 449 2.0E-77 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS11555 04529ee1c09dd2452fd95493b1d545b0 107 Gene3D G3DSA:3.10.450.140 7 107 1.6E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative YPTB_RS11555 04529ee1c09dd2452fd95493b1d545b0 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.84 T 22-04-2016 IPR007376 dsDNA mimic, putative YPTB_RS11555 04529ee1c09dd2452fd95493b1d545b0 107 PIRSF PIRSF004916 1 107 4.6E-56 T 22-04-2016 IPR007376 dsDNA mimic, putative YPTB_RS11555 04529ee1c09dd2452fd95493b1d545b0 107 SUPERFAMILY SSF102816 1 107 5.62E-52 T 22-04-2016 IPR007376 dsDNA mimic, putative YPTB_RS11555 04529ee1c09dd2452fd95493b1d545b0 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 1.0E-53 T 22-04-2016 IPR007376 dsDNA mimic, putative YPTB_RS11555 04529ee1c09dd2452fd95493b1d545b0 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 7.0E-47 T 22-04-2016 IPR007376 dsDNA mimic, putative YPTB_RS03115 d0e075ad9c9c429114ebad1897a512f2 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 307 6.3E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS03115 d0e075ad9c9c429114ebad1897a512f2 333 PANTHER PTHR32196:SF24 1 331 2.4E-167 T 22-04-2016 YPTB_RS03115 d0e075ad9c9c429114ebad1897a512f2 333 PANTHER PTHR32196 1 331 2.4E-167 T 22-04-2016 YPTB_RS10765 2bc4dd72474fbd3819f9782b5e9a14d9 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.674 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPTB_RS10765 2bc4dd72474fbd3819f9782b5e9a14d9 447 Pfam PF04996 Succinylarginine dihydrolase 4 445 1.8E-216 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPTB_RS10765 2bc4dd72474fbd3819f9782b5e9a14d9 447 PANTHER PTHR30420:SF2 2 446 0.0 T 22-04-2016 YPTB_RS10765 2bc4dd72474fbd3819f9782b5e9a14d9 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 1.2E-252 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPTB_RS10765 2bc4dd72474fbd3819f9782b5e9a14d9 447 SUPERFAMILY SSF55909 4 446 1.57E-201 T 22-04-2016 YPTB_RS10765 2bc4dd72474fbd3819f9782b5e9a14d9 447 PANTHER PTHR30420 2 446 0.0 T 22-04-2016 YPTB_RS10765 2bc4dd72474fbd3819f9782b5e9a14d9 447 Gene3D G3DSA:3.75.10.20 1 446 3.7E-224 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPTB_RS04505 ac242ad0e7ba64e2267deacfc80e372a 205 SUPERFAMILY SSF141318 49 202 1.31E-43 T 22-04-2016 YPTB_RS04505 ac242ad0e7ba64e2267deacfc80e372a 205 PIRSF PIRSF033535 1 204 1.0E-83 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPTB_RS04505 ac242ad0e7ba64e2267deacfc80e372a 205 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 13 200 1.2E-35 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPTB_RS20835 d84094777b2c61d153677ae9554b9598 187 SUPERFAMILY SSF53271 33 175 2.49E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS20835 d84094777b2c61d153677ae9554b9598 187 Pfam PF00156 Phosphoribosyl transferase domain 34 151 5.2E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPTB_RS20835 d84094777b2c61d153677ae9554b9598 187 PANTHER PTHR19278:SF32 27 176 9.1E-34 T 22-04-2016 YPTB_RS20835 d84094777b2c61d153677ae9554b9598 187 Gene3D G3DSA:3.40.50.2020 3 181 3.6E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPTB_RS20835 d84094777b2c61d153677ae9554b9598 187 PANTHER PTHR19278 27 176 9.1E-34 T 22-04-2016 YPTB_RS13045 89d3c26a612b93f78aaf8b52f795972f 129 SUPERFAMILY SSF52172 5 125 1.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPTB_RS13045 89d3c26a612b93f78aaf8b52f795972f 129 SMART SM00448 6 120 7.7E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS13045 89d3c26a612b93f78aaf8b52f795972f 129 Pfam PF00072 Response regulator receiver domain 9 120 9.5E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPTB_RS13045 89d3c26a612b93f78aaf8b52f795972f 129 PANTHER PTHR26402 6 126 1.0E-41 T 22-04-2016 YPTB_RS13045 89d3c26a612b93f78aaf8b52f795972f 129 Gene3D G3DSA:3.40.50.2300 4 126 6.7E-39 T 22-04-2016 YPTB_RS02065 7a8aeb599bc9f0ad90e73a56b05ee4a5 394 PIRSF PIRSF037118 1 394 6.3E-180 T 22-04-2016 IPR017115 Tellurite resistance, TerA YPTB_RS02065 7a8aeb599bc9f0ad90e73a56b05ee4a5 394 PANTHER PTHR32097 26 393 2.3E-134 T 22-04-2016 YPTB_RS02065 7a8aeb599bc9f0ad90e73a56b05ee4a5 394 PANTHER PTHR32097:SF3 26 393 2.3E-134 T 22-04-2016 YPTB_RS02065 7a8aeb599bc9f0ad90e73a56b05ee4a5 394 Pfam PF02342 TerD domain 25 159 1.7E-29 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPTB_RS02065 7a8aeb599bc9f0ad90e73a56b05ee4a5 394 Gene3D G3DSA:2.60.60.30 25 156 4.6E-25 T 22-04-2016 YPTB_RS20920 5fe38a491982102b68b16ffdcbe59f4b 109 Pfam PF01695 IstB-like ATP binding protein 9 71 7.3E-22 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPTB_RS20920 5fe38a491982102b68b16ffdcbe59f4b 109 Gene3D G3DSA:3.40.50.300 13 72 1.2E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20920 5fe38a491982102b68b16ffdcbe59f4b 109 PANTHER PTHR30050 13 86 8.5E-22 T 22-04-2016 YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.5E-70 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241:SF1 77 192 2.4E-70 T 22-04-2016 YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241:SF1 1 58 2.4E-70 T 22-04-2016 YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 Gene3D G3DSA:2.70.40.10 1 192 4.5E-62 T 22-04-2016 IPR029054 dUTPase-like YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241 77 192 2.4E-70 T 22-04-2016 YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241 1 58 2.4E-70 T 22-04-2016 YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 Pfam PF00692 dUTPase 79 185 1.4E-10 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 SUPERFAMILY SSF51283 1 193 5.83E-62 T 22-04-2016 IPR029054 dUTPase-like YPTB_RS08455 bbb60b141bfe33944b240ec3fbeef41d 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 35.137 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 YPTB_RS19590 1e50d7a463af7f1cc9ea0facfaab91c6 152 Gene3D G3DSA:3.40.1000.10 6 147 5.9E-44 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTB_RS19590 1e50d7a463af7f1cc9ea0facfaab91c6 152 Pfam PF08786 Domain of unknown function (DUF1795) 13 141 1.6E-39 T 22-04-2016 IPR014894 Protein DcrB YPTB_RS19590 1e50d7a463af7f1cc9ea0facfaab91c6 152 SUPERFAMILY SSF55724 6 146 3.98E-46 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTB_RS06520 5e69b7b4777c4a7fe9ce935630257dcb 50 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 46 1.1E-30 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YPTB_RS06520 5e69b7b4777c4a7fe9ce935630257dcb 50 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 47 19.556 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YPTB_RS09615 309f7e70f9c7d4387114ec18c98775f4 479 PANTHER PTHR35191 1 194 4.5E-59 T 22-04-2016 YPTB_RS09615 309f7e70f9c7d4387114ec18c98775f4 479 Pfam PF12571 Phage tail-collar fibre protein 1 150 2.7E-62 T 22-04-2016 IPR022225 Phage tail fibre protein YPTB_RS06040 b8f8bc5d465199749e9adf230fbdcdbc 370 PANTHER PTHR30474 1 369 3.6E-182 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPTB_RS06040 b8f8bc5d465199749e9adf230fbdcdbc 370 PANTHER PTHR30474:SF1 1 369 3.6E-182 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 YPTB_RS06040 b8f8bc5d465199749e9adf230fbdcdbc 370 Pfam PF01098 Cell cycle protein 21 364 6.8E-122 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPTB_RS06040 b8f8bc5d465199749e9adf230fbdcdbc 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 4.9E-136 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 YPTB_RS06040 b8f8bc5d465199749e9adf230fbdcdbc 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 YPTB_RS10390 368040b61c3831d3702c3f80e4a8ca27 270 SUPERFAMILY SSF53335 25 212 3.94E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10390 368040b61c3831d3702c3f80e4a8ca27 270 PANTHER PTHR10108:SF705 42 258 5.3E-19 T 22-04-2016 YPTB_RS10390 368040b61c3831d3702c3f80e4a8ca27 270 Gene3D G3DSA:3.40.50.150 42 240 1.2E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS10390 368040b61c3831d3702c3f80e4a8ca27 270 Pfam PF08241 Methyltransferase domain 58 156 6.1E-15 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YPTB_RS10390 368040b61c3831d3702c3f80e4a8ca27 270 PANTHER PTHR10108 42 258 5.3E-19 T 22-04-2016 YPTB_RS12480 c21de816a4d57cc0f8c505e33e36a53b 545 Gene3D G3DSA:3.40.720.10 297 539 4.9E-16 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS12480 c21de816a4d57cc0f8c505e33e36a53b 545 Pfam PF08019 Domain of unknown function (DUF1705) 56 208 1.4E-49 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 YPTB_RS12480 c21de816a4d57cc0f8c505e33e36a53b 545 SUPERFAMILY SSF53649 237 539 9.45E-23 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS12480 c21de816a4d57cc0f8c505e33e36a53b 545 PANTHER PTHR30443:SF0 1 545 3.0E-304 T 22-04-2016 YPTB_RS12480 c21de816a4d57cc0f8c505e33e36a53b 545 PANTHER PTHR30443 1 545 3.0E-304 T 22-04-2016 YPTB_RS12480 c21de816a4d57cc0f8c505e33e36a53b 545 Pfam PF00884 Sulfatase 237 525 1.4E-45 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPTB_RS14250 d387f0dfcbb6edfdcd6243c7249ee153 92 Pfam PF08891 YfcL protein 4 86 4.8E-37 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL YPTB_RS14250 d387f0dfcbb6edfdcd6243c7249ee153 92 Gene3D G3DSA:1.10.357.10 5 91 4.1E-4 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS14820 b94666000c8716b4c892250dc298b0a2 277 PANTHER PTHR30406 7 277 3.1E-211 T 22-04-2016 YPTB_RS14820 b94666000c8716b4c892250dc298b0a2 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 3.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14820 b94666000c8716b4c892250dc298b0a2 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 269 2.2E-111 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YPTB_RS14820 b94666000c8716b4c892250dc298b0a2 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 1.1E-114 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 YPTB_RS14820 b94666000c8716b4c892250dc298b0a2 277 PANTHER PTHR30406:SF7 7 277 3.1E-211 T 22-04-2016 YPTB_RS14820 b94666000c8716b4c892250dc298b0a2 277 SUPERFAMILY SSF161098 17 264 7.59E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14820 b94666000c8716b4c892250dc298b0a2 277 Gene3D G3DSA:1.10.3720.10 20 273 9.9E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS09115 c302fecfec06bfc399ca560f24a525f6 141 Hamap MF_01435 Protein YebF [yebF]. 6 122 38.535 T 22-04-2016 IPR020236 Uncharacterised protein family YebF YPTB_RS09115 c302fecfec06bfc399ca560f24a525f6 141 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 30 119 3.0E-47 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein YPTB_RS09115 c302fecfec06bfc399ca560f24a525f6 141 Pfam PF13995 YebF-like protein 32 119 5.7E-39 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein YPTB_RS06450 7b9a535719b03cc0b8e0b085c2314add 353 PANTHER PTHR30573 1 352 2.0E-172 T 22-04-2016 YPTB_RS06450 7b9a535719b03cc0b8e0b085c2314add 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.082 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPTB_RS06450 7b9a535719b03cc0b8e0b085c2314add 353 SUPERFAMILY SSF142754 29 341 1.96E-106 T 22-04-2016 YPTB_RS06450 7b9a535719b03cc0b8e0b085c2314add 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 5.4E-121 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPTB_RS06450 7b9a535719b03cc0b8e0b085c2314add 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 4.2E-102 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPTB_RS09200 d0d9e829897fb299a527342a81fd3e31 100 SUPERFAMILY SSF101498 3 92 4.97E-13 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPTB_RS09200 d0d9e829897fb299a527342a81fd3e31 100 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 93 7.4E-19 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPTB_RS09200 d0d9e829897fb299a527342a81fd3e31 100 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 91 3.6E-10 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPTB_RS02045 ac4ea9327af411006912b6dfef7d1fa7 270 SUPERFAMILY SSF56784 1 238 4.81E-17 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS02045 ac4ea9327af411006912b6dfef7d1fa7 270 PIRSF PIRSF030802 1 257 5.9E-145 T 22-04-2016 IPR024197 Uncharacterised conserved protein UCP030802 YPTB_RS02045 ac4ea9327af411006912b6dfef7d1fa7 270 Gene3D G3DSA:3.40.50.1000 5 105 2.0E-5 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS02045 ac4ea9327af411006912b6dfef7d1fa7 270 Gene3D G3DSA:3.40.50.1000 183 234 2.0E-5 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 Pfam PF00482 Type II secretion system (T2SS), protein F 15 137 3.2E-29 T 22-04-2016 IPR018076 Type II secretion system F domain YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 Pfam PF00482 Type II secretion system (T2SS), protein F 218 337 1.1E-21 T 22-04-2016 IPR018076 Type II secretion system F domain YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 109 137 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 PANTHER PTHR30012:SF6 10 348 4.1E-121 T 22-04-2016 YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 PANTHER PTHR30012 10 348 4.1E-121 T 22-04-2016 YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 10 22 1.8E-34 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 312 326 1.8E-34 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 328 347 1.8E-34 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS16585 072f59484acf00d1b17b210f7908c36f 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 109 137 1.8E-34 T 22-04-2016 IPR003004 GspF/PilC family YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 Pfam PF03466 LysR substrate binding domain 88 291 3.3E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 SUPERFAMILY SSF46785 5 107 4.24E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 PANTHER PTHR30537:SF13 1 297 1.7E-203 T 22-04-2016 YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 Gene3D G3DSA:3.40.190.10 178 259 1.1E-20 T 22-04-2016 YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 Gene3D G3DSA:3.40.190.10 92 177 4.1E-22 T 22-04-2016 YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 Gene3D G3DSA:1.10.10.10 4 79 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 PANTHER PTHR30537 1 297 1.7E-203 T 22-04-2016 YPTB_RS16510 2423d7fdd2cb6287b2a823429bc8829d 302 SUPERFAMILY SSF53850 89 295 5.25E-43 T 22-04-2016 YPTB_RS17490 71326c8852e634c339bb0aa22468ce57 311 PANTHER PTHR32196:SF21 1 310 2.6E-115 T 22-04-2016 YPTB_RS17490 71326c8852e634c339bb0aa22468ce57 311 PANTHER PTHR32196 1 310 2.6E-115 T 22-04-2016 YPTB_RS17490 71326c8852e634c339bb0aa22468ce57 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 300 3.4E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS05755 74953bd31c43734babcc5e7184132fb5 200 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 94 1.5E-10 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YPTB_RS13640 396198fb92c1698080710bc17234eecd 414 SUPERFAMILY SSF50182 187 252 2.81E-12 T 22-04-2016 IPR010920 LSM domain YPTB_RS13640 396198fb92c1698080710bc17234eecd 414 PANTHER PTHR30414 1 414 6.7E-221 T 22-04-2016 YPTB_RS13640 396198fb92c1698080710bc17234eecd 414 Pfam PF00924 Mechanosensitive ion channel 143 398 2.6E-55 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPTB_RS13640 396198fb92c1698080710bc17234eecd 414 Gene3D G3DSA:2.30.30.60 202 252 4.1E-10 T 22-04-2016 YPTB_RS13640 396198fb92c1698080710bc17234eecd 414 PANTHER PTHR30414:SF0 1 414 6.7E-221 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 YPTB_RS06765 bc84a6d618e6213e8be858012096ff09 367 Pfam PF05076 Suppressor of fused protein (SUFU) 200 363 2.5E-22 T 22-04-2016 IPR020941 Suppressor of fused-like domain YPTB_RS21325 de2aeed91b22fd33b7762cc31acd5262 399 PANTHER PTHR37480 2 399 1.4E-261 T 22-04-2016 YPTB_RS21325 de2aeed91b22fd33b7762cc31acd5262 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 7.9E-107 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPTB_RS21325 de2aeed91b22fd33b7762cc31acd5262 399 Pfam PF07055 Enoyl reductase FAD binding domain 324 387 1.9E-28 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPTB_RS21325 de2aeed91b22fd33b7762cc31acd5262 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 54.597 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPTB_RS21325 de2aeed91b22fd33b7762cc31acd5262 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 3.8E-38 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPTB_RS11945 680afeb41c74f924d892a4ebb6b722a4 432 PANTHER PTHR23501 16 425 4.0E-211 T 22-04-2016 YPTB_RS11945 680afeb41c74f924d892a4ebb6b722a4 432 Gene3D G3DSA:1.20.1250.20 49 229 7.5E-33 T 22-04-2016 YPTB_RS11945 680afeb41c74f924d892a4ebb6b722a4 432 Gene3D G3DSA:1.20.1250.20 253 425 4.0E-13 T 22-04-2016 YPTB_RS11945 680afeb41c74f924d892a4ebb6b722a4 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 103 119 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPTB_RS11945 680afeb41c74f924d892a4ebb6b722a4 432 PANTHER PTHR23501:SF11 16 425 4.0E-211 T 22-04-2016 YPTB_RS11945 680afeb41c74f924d892a4ebb6b722a4 432 Pfam PF07690 Major Facilitator Superfamily 53 272 3.2E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS11945 680afeb41c74f924d892a4ebb6b722a4 432 SUPERFAMILY SSF103473 32 425 1.83E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS06410 e105e31110324de7f23db9bd07a7766c 269 SUPERFAMILY SSF48452 158 262 7.59E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS06410 e105e31110324de7f23db9bd07a7766c 269 Pfam PF13525 Outer membrane lipoprotein 155 268 6.3E-10 T 22-04-2016 YPTB_RS06410 e105e31110324de7f23db9bd07a7766c 269 PANTHER PTHR26312:SF74 160 266 5.0E-43 T 22-04-2016 YPTB_RS06410 e105e31110324de7f23db9bd07a7766c 269 Gene3D G3DSA:1.25.40.10 158 257 1.9E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS06410 e105e31110324de7f23db9bd07a7766c 269 PANTHER PTHR26312 160 266 5.0E-43 T 22-04-2016 YPTB_RS06410 e105e31110324de7f23db9bd07a7766c 269 Pfam PF16331 TolA binding protein trimerisation 37 111 1.4E-23 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 YPTB_RS06410 e105e31110324de7f23db9bd07a7766c 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 3.7E-44 T 22-04-2016 IPR014162 Tol-Pal system, YbgF YPTB_RS02865 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 Gene3D G3DSA:3.40.190.10 33 142 1.8E-20 T 22-04-2016 YPTB_RS02865 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 SUPERFAMILY SSF53850 32 432 1.74E-79 T 22-04-2016 YPTB_RS02865 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 PANTHER PTHR30061 1 435 1.2E-149 T 22-04-2016 YPTB_RS02865 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 PANTHER PTHR30061:SF14 1 435 1.2E-149 T 22-04-2016 YPTB_RS02865 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 Pfam PF01547 Bacterial extracellular solute-binding protein 45 340 4.7E-36 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPTB_RS02865 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 Gene3D G3DSA:3.40.190.10 144 354 2.7E-49 T 22-04-2016 YPTB_RS04300 70b7fcdb874daf9fdc402f6b3f471648 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPTB_RS04300 70b7fcdb874daf9fdc402f6b3f471648 208 PANTHER PTHR11579 9 203 3.5E-93 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPTB_RS04300 70b7fcdb874daf9fdc402f6b3f471648 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 2.1E-89 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPTB_RS04300 70b7fcdb874daf9fdc402f6b3f471648 208 Gene3D G3DSA:3.40.50.150 12 205 3.0E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS04300 70b7fcdb874daf9fdc402f6b3f471648 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.889 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPTB_RS04300 70b7fcdb874daf9fdc402f6b3f471648 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 3.6E-76 T 22-04-2016 YPTB_RS04300 70b7fcdb874daf9fdc402f6b3f471648 208 SUPERFAMILY SSF53335 4 204 6.75E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07200 a73d7a4ae17e4e339f01d3b3e5722fce 94 Pfam PF01386 Ribosomal L25p family 4 91 6.2E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YPTB_RS07200 a73d7a4ae17e4e339f01d3b3e5722fce 94 Gene3D G3DSA:2.40.240.10 2 94 8.5E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YPTB_RS07200 a73d7a4ae17e4e339f01d3b3e5722fce 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 26.652 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 YPTB_RS07200 a73d7a4ae17e4e339f01d3b3e5722fce 94 SUPERFAMILY SSF50715 1 94 1.92E-29 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 YPTB_RS07200 a73d7a4ae17e4e339f01d3b3e5722fce 94 PANTHER PTHR33284 1 94 5.1E-42 T 22-04-2016 YPTB_RS07200 a73d7a4ae17e4e339f01d3b3e5722fce 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 94 2.0E-45 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YPTB_RS20130 f5b5284f91f52ac4cda915b552a005d4 255 Pfam PF00005 ABC transporter 17 156 8.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS20130 f5b5284f91f52ac4cda915b552a005d4 255 PANTHER PTHR24220:SF564 3 205 3.5E-150 T 22-04-2016 YPTB_RS20130 f5b5284f91f52ac4cda915b552a005d4 255 PANTHER PTHR24220 3 205 3.5E-150 T 22-04-2016 YPTB_RS20130 f5b5284f91f52ac4cda915b552a005d4 255 SMART SM00382 26 215 1.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS20130 f5b5284f91f52ac4cda915b552a005d4 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS20130 f5b5284f91f52ac4cda915b552a005d4 255 Gene3D G3DSA:3.40.50.300 1 213 7.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS20130 f5b5284f91f52ac4cda915b552a005d4 255 SUPERFAMILY SSF52540 1 213 1.0E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS05030 6ac7abed1968c86c1b2de96aec254c71 249 Gene3D G3DSA:2.30.110.10 10 115 5.9E-14 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPTB_RS05030 6ac7abed1968c86c1b2de96aec254c71 249 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 242 29.836 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 YPTB_RS05030 6ac7abed1968c86c1b2de96aec254c71 249 Gene3D G3DSA:2.40.10.220 116 243 1.3E-17 T 22-04-2016 YPTB_RS05030 6ac7abed1968c86c1b2de96aec254c71 249 Pfam PF07317 Flagellar regulator YcgR 9 112 7.8E-30 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPTB_RS05030 6ac7abed1968c86c1b2de96aec254c71 249 Pfam PF07238 PilZ domain 115 233 1.8E-11 T 22-04-2016 IPR009875 PilZ domain GO:0035438 YPTB_RS14450 79fddd6b1184f2c9fe51083108bfece2 202 PANTHER PTHR33420 23 202 3.2E-101 T 22-04-2016 YPTB_RS14450 79fddd6b1184f2c9fe51083108bfece2 202 Gene3D G3DSA:2.60.40.1090 46 202 1.3E-25 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS14450 79fddd6b1184f2c9fe51083108bfece2 202 SUPERFAMILY SSF49401 54 202 4.28E-20 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS14450 79fddd6b1184f2c9fe51083108bfece2 202 PANTHER PTHR33420:SF2 23 202 3.2E-101 T 22-04-2016 YPTB_RS14450 79fddd6b1184f2c9fe51083108bfece2 202 Pfam PF00419 Fimbrial protein 48 201 3.9E-12 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS02515 a9d6788ca3a323bab6f63207fe522b9a 249 PANTHER PTHR10655:SF33 177 249 1.1E-15 T 22-04-2016 YPTB_RS02515 a9d6788ca3a323bab6f63207fe522b9a 249 PANTHER PTHR10655:SF33 20 151 1.1E-15 T 22-04-2016 YPTB_RS02515 a9d6788ca3a323bab6f63207fe522b9a 249 SUPERFAMILY SSF53474 14 249 8.38E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS02515 a9d6788ca3a323bab6f63207fe522b9a 249 Gene3D G3DSA:3.40.50.1820 3 249 2.3E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS02515 a9d6788ca3a323bab6f63207fe522b9a 249 Pfam PF00326 Prolyl oligopeptidase family 89 234 3.4E-13 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YPTB_RS02515 a9d6788ca3a323bab6f63207fe522b9a 249 PANTHER PTHR10655 177 249 1.1E-15 T 22-04-2016 YPTB_RS02515 a9d6788ca3a323bab6f63207fe522b9a 249 PANTHER PTHR10655 20 151 1.1E-15 T 22-04-2016 YPTB_RS08155 ee94b3832303daef572761cf0bd10421 110 Pfam PF13924 Lipocalin-like domain 1 108 2.1E-23 T 22-04-2016 IPR024311 Lipocalin-like domain YPTB_RS04010 347486e69c2ebdd22498eedb5f303f15 119 PIRSF PIRSF006287 1 119 3.5E-50 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPTB_RS04010 347486e69c2ebdd22498eedb5f303f15 119 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 4.0E-63 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPTB_RS04010 347486e69c2ebdd22498eedb5f303f15 119 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.8E-44 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPTB_RS04010 347486e69c2ebdd22498eedb5f303f15 119 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.976 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPTB_RS12345 ebae9848eb5e44f37b4babba29f71369 353 Pfam PF05128 Domain of unknown function (DUF697) 183 342 3.4E-57 T 22-04-2016 IPR021147 Protein of unknown function DUF697 YPTB_RS12345 ebae9848eb5e44f37b4babba29f71369 353 PANTHER PTHR39342 1 351 3.9E-151 T 22-04-2016 YPTB_RS12345 ebae9848eb5e44f37b4babba29f71369 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 39.45 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 YPTB_RS12345 ebae9848eb5e44f37b4babba29f71369 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 9.5E-134 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 YPTB_RS12345 ebae9848eb5e44f37b4babba29f71369 353 PANTHER PTHR39342:SF1 1 351 3.9E-151 T 22-04-2016 YPTB_RS09195 24cc44fa7cf3876bcda9532bae2e5c2d 146 SUPERFAMILY SSF140566 2 120 1.7E-19 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPTB_RS09195 24cc44fa7cf3876bcda9532bae2e5c2d 146 Gene3D G3DSA:1.20.58.300 3 119 6.6E-14 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPTB_RS09195 24cc44fa7cf3876bcda9532bae2e5c2d 146 Pfam PF05130 FlgN protein 2 135 4.5E-27 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPTB_RS02405 6a20505a87465596b84c8c299ba66c75 181 SUPERFAMILY SSF53098 4 179 8.04E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS02405 6a20505a87465596b84c8c299ba66c75 181 Pfam PF00929 Exonuclease 9 170 2.0E-34 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS02405 6a20505a87465596b84c8c299ba66c75 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.454 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 YPTB_RS02405 6a20505a87465596b84c8c299ba66c75 181 Gene3D G3DSA:3.30.420.10 4 180 1.2E-70 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS02405 6a20505a87465596b84c8c299ba66c75 181 PANTHER PTHR11046:SF1 2 180 1.5E-128 T 22-04-2016 YPTB_RS02405 6a20505a87465596b84c8c299ba66c75 181 PANTHER PTHR11046 2 180 1.5E-128 T 22-04-2016 YPTB_RS02405 6a20505a87465596b84c8c299ba66c75 181 SMART SM00479 7 180 2.3E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB_RS11750 202c4fc0f1517cfe529368cb70281105 108 Pfam PF01253 Translation initiation factor SUI1 32 101 6.2E-20 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YPTB_RS11750 202c4fc0f1517cfe529368cb70281105 108 SUPERFAMILY SSF55159 5 104 6.02E-27 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YPTB_RS11750 202c4fc0f1517cfe529368cb70281105 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.2E-38 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YPTB_RS11750 202c4fc0f1517cfe529368cb70281105 108 PIRSF PIRSF037511 1 108 8.3E-36 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YPTB_RS11750 202c4fc0f1517cfe529368cb70281105 108 Gene3D G3DSA:3.30.780.10 28 108 6.4E-35 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YPTB_RS11750 202c4fc0f1517cfe529368cb70281105 108 PANTHER PTHR12789 1 108 2.2E-42 T 22-04-2016 YPTB_RS12360 e715f5d9e9ca77ae5439b912fd45ffaa 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 3.9E-40 T 22-04-2016 IPR014320 Phage shock protein, PspC YPTB_RS12360 e715f5d9e9ca77ae5439b912fd45ffaa 119 Pfam PF04024 PspC domain 8 64 7.5E-18 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal YPTB_RS12360 e715f5d9e9ca77ae5439b912fd45ffaa 119 PANTHER PTHR33885 1 119 1.1E-40 T 22-04-2016 YPTB_RS04650 d7311382eecbf0a3acc726fb46f771de 255 Pfam PF04338 Protein of unknown function, DUF481 50 254 3.7E-56 T 22-04-2016 IPR007433 Protein of unknown function DUF481 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PANTHER PTHR28283 1 344 9.8E-140 T 22-04-2016 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 269 282 4.6E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 114 132 4.6E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 250 261 4.6E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 295 306 4.6E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 141 162 4.6E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 SUPERFAMILY SSF56281 42 320 4.87E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PIRSF PIRSF000962 1 344 9.8E-131 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 PANTHER PTHR28283:SF1 1 344 9.8E-140 T 22-04-2016 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 Gene3D G3DSA:3.60.15.10 48 305 5.8E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 Pfam PF02112 cAMP phosphodiesterases class-II 41 339 4.6E-53 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPTB_RS15735 559f8789ec4496dbacbea6407bae3a3f 345 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 118 132 - T 22-04-2016 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 YPTB_RS06575 e56da8bad9c8ceb97213fb4c79c37654 236 PANTHER PTHR24220:SF404 3 227 2.7E-126 T 22-04-2016 YPTB_RS06575 e56da8bad9c8ceb97213fb4c79c37654 236 PANTHER PTHR24220 3 227 2.7E-126 T 22-04-2016 YPTB_RS06575 e56da8bad9c8ceb97213fb4c79c37654 236 Gene3D G3DSA:3.40.50.300 1 226 7.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06575 e56da8bad9c8ceb97213fb4c79c37654 236 Pfam PF00005 ABC transporter 19 164 1.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS06575 e56da8bad9c8ceb97213fb4c79c37654 236 SUPERFAMILY SSF52540 2 227 5.33E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS06575 e56da8bad9c8ceb97213fb4c79c37654 236 SMART SM00382 26 218 4.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS10410 f29fc8b770c52a4b987dd71a3affacba 109 SUPERFAMILY SSF46689 1 66 9.85E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS10410 f29fc8b770c52a4b987dd71a3affacba 109 Gene3D G3DSA:1.10.10.10 60 104 3.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS10410 f29fc8b770c52a4b987dd71a3affacba 109 Gene3D G3DSA:1.10.10.60 6 59 3.4E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS10410 f29fc8b770c52a4b987dd71a3affacba 109 Pfam PF01527 Transposase 5 54 1.2E-6 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPTB_RS10655 56c2e79f6292bb90131b109de0f5615b 469 Pfam PF10080 Predicted membrane protein (DUF2318) 297 400 1.3E-28 T 22-04-2016 IPR018758 Domain of unknown function DUF2318, membrane YPTB_RS10655 56c2e79f6292bb90131b109de0f5615b 469 Pfam PF04945 YHS domain 408 454 2.6E-18 T 22-04-2016 IPR007029 YHS domain YPTB_RS19475 b77c683cf63bacffb06c83f3b44be0b5 67 Pfam PF04221 RelB antitoxin 5 57 7.1E-10 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ YPTB_RS19475 b77c683cf63bacffb06c83f3b44be0b5 67 PIRSF PIRSF003108 2 67 6.8E-15 T 22-04-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 YPTB_RS19475 b77c683cf63bacffb06c83f3b44be0b5 67 PANTHER PTHR38781:SF1 1 67 1.3E-25 T 22-04-2016 YPTB_RS19475 b77c683cf63bacffb06c83f3b44be0b5 67 PANTHER PTHR38781 1 67 1.3E-25 T 22-04-2016 YPTB_RS17920 8305a0a2c3736eb5b43805b8b3f6c619 101 Pfam PF10840 Protein of unknown function (DUF2645) 5 101 1.9E-33 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 YPTB_RS17920 8305a0a2c3736eb5b43805b8b3f6c619 101 ProDom PD069399 MEMBRANE INNER YJEO SIMILAR INTEGRAL ORF22 ESCHERICHIA TRANSMEMBRANE COLI 3 101 9.0E-49 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 SUPERFAMILY SSF51735 9 252 3.58E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 2.7E-136 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 2.1E-58 T 22-04-2016 YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322:SF402 15 142 2.5E-66 T 22-04-2016 YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322:SF402 158 190 2.5E-66 T 22-04-2016 YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322 15 142 2.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322 158 190 2.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS12835 d792232c47314edd81bfd7074e8e583a 253 Gene3D G3DSA:3.40.50.720 6 252 3.9E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS12305 a4d12e8631d261f8ea5b19eb5d721627 327 Gene3D G3DSA:1.20.58.340 252 327 3.4E-19 T 22-04-2016 YPTB_RS12305 a4d12e8631d261f8ea5b19eb5d721627 327 SUPERFAMILY SSF143865 11 259 2.35E-52 T 22-04-2016 YPTB_RS12305 a4d12e8631d261f8ea5b19eb5d721627 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 1.8E-64 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YPTB_RS12305 a4d12e8631d261f8ea5b19eb5d721627 327 PANTHER PTHR21535 42 327 2.3E-47 T 22-04-2016 YPTB_RS12305 a4d12e8631d261f8ea5b19eb5d721627 327 SUPERFAMILY SSF144083 263 324 2.62E-13 T 22-04-2016 YPTB_RS12305 a4d12e8631d261f8ea5b19eb5d721627 327 Gene3D G3DSA:1.20.58.340 142 243 9.5E-15 T 22-04-2016 YPTB_RS18060 992466527ddc5f1b038b596f092d22c3 148 PIRSF PIRSF002889 1 148 1.9E-35 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPTB_RS18060 992466527ddc5f1b038b596f092d22c3 148 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 146 6.3E-31 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPTB_RS18060 992466527ddc5f1b038b596f092d22c3 148 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPTB_RS18060 992466527ddc5f1b038b596f092d22c3 148 PANTHER PTHR30435:SF12 3 148 9.4E-50 T 22-04-2016 YPTB_RS18060 992466527ddc5f1b038b596f092d22c3 148 PANTHER PTHR30435 3 148 9.4E-50 T 22-04-2016 YPTB_RS18060 992466527ddc5f1b038b596f092d22c3 148 Pfam PF00460 Flagella basal body rod protein 15 39 4.0E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPTB_RS18490 5856ae587232062b325a78461f4ca795 94 Pfam PF03592 Terminase small subunit 14 91 1.2E-9 T 22-04-2016 IPR005335 Terminase small subunit GO:0006323 YPTB_RS11835 6f80aede1f5521bfa77f167c29dcd81a 193 PANTHER PTHR30335 2 193 1.4E-133 T 22-04-2016 YPTB_RS11835 6f80aede1f5521bfa77f167c29dcd81a 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.9E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS11835 6f80aede1f5521bfa77f167c29dcd81a 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.463 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 YPTB_RS11835 6f80aede1f5521bfa77f167c29dcd81a 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.1E-90 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 YPTB_RS11835 6f80aede1f5521bfa77f167c29dcd81a 193 PANTHER PTHR30335:SF0 2 193 1.4E-133 T 22-04-2016 YPTB_RS11835 6f80aede1f5521bfa77f167c29dcd81a 193 PIRSF PIRSF006102 1 193 3.1E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPTB_RS00105 4d111f438c7fc1cfc812338d3e7a6872 139 PANTHER PTHR37831:SF1 2 139 8.7E-73 T 22-04-2016 YPTB_RS00105 4d111f438c7fc1cfc812338d3e7a6872 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.831 T 22-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 YPTB_RS00105 4d111f438c7fc1cfc812338d3e7a6872 139 PANTHER PTHR37831 2 139 8.7E-73 T 22-04-2016 YPTB_RS00105 4d111f438c7fc1cfc812338d3e7a6872 139 SUPERFAMILY SSF102546 1 139 3.14E-44 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPTB_RS00105 4d111f438c7fc1cfc812338d3e7a6872 139 Gene3D G3DSA:3.40.1650.10 1 139 1.6E-42 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPTB_RS00105 4d111f438c7fc1cfc812338d3e7a6872 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.5E-49 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 YPTB_RS10905 6c89e70f315ce3c16262919728e7d129 357 Gene3D G3DSA:3.40.50.1820 27 356 3.1E-110 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS10905 6c89e70f315ce3c16262919728e7d129 357 Pfam PF12697 Alpha/beta hydrolase family 84 308 1.4E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS10905 6c89e70f315ce3c16262919728e7d129 357 SUPERFAMILY SSF53474 56 153 9.08E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS10905 6c89e70f315ce3c16262919728e7d129 357 SUPERFAMILY SSF53474 186 353 9.08E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS10905 6c89e70f315ce3c16262919728e7d129 357 PANTHER PTHR11177:SF162 104 345 3.7E-74 T 22-04-2016 YPTB_RS10905 6c89e70f315ce3c16262919728e7d129 357 PANTHER PTHR11177 104 345 3.7E-74 T 22-04-2016 YPTB_RS04145 05ca593d44188ecfc850e31a12e1ca05 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 5.5E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YPTB_RS04145 05ca593d44188ecfc850e31a12e1ca05 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTB_RS04145 05ca593d44188ecfc850e31a12e1ca05 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 3.0E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS04145 05ca593d44188ecfc850e31a12e1ca05 114 Gene3D G3DSA:2.60.300.12 9 104 9.6E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS04145 05ca593d44188ecfc850e31a12e1ca05 114 SUPERFAMILY SSF89360 8 103 7.06E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis YPTB_RS04145 05ca593d44188ecfc850e31a12e1ca05 114 PANTHER PTHR10072 9 114 3.6E-49 T 22-04-2016 YPTB_RS04145 05ca593d44188ecfc850e31a12e1ca05 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.686 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 YPTB_RS06095 507e4f76eb580bf802ea0467cf5ab59e 246 Gene3D G3DSA:1.10.3720.10 23 237 5.9E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06095 507e4f76eb580bf802ea0467cf5ab59e 246 PANTHER PTHR30085:SF4 1 244 3.9E-158 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 YPTB_RS06095 507e4f76eb580bf802ea0467cf5ab59e 246 PANTHER PTHR30085 1 244 3.9E-158 T 22-04-2016 YPTB_RS06095 507e4f76eb580bf802ea0467cf5ab59e 246 SUPERFAMILY SSF161098 24 223 7.85E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS06095 507e4f76eb580bf802ea0467cf5ab59e 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 131 4.6E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS06095 507e4f76eb580bf802ea0467cf5ab59e 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 237 2.2E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.1E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 SUPERFAMILY SSF48498 85 203 5.34E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 SUPERFAMILY SSF46689 2 78 1.75E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 Gene3D G3DSA:1.10.357.10 1 203 8.2E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 PANTHER PTHR30328:SF26 1 218 1.8E-157 T 22-04-2016 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 PANTHER PTHR30328 1 218 1.8E-157 T 22-04-2016 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPTB_RS05445 04e9e7613edab25d7d9c910cc3e46883 218 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 1.1E-54 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244:SF1 279 368 1.2E-143 T 22-04-2016 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244:SF1 2 260 1.2E-143 T 22-04-2016 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244 279 368 1.2E-143 T 22-04-2016 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244 2 260 1.2E-143 T 22-04-2016 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 110 133 7.2E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 36 53 7.2E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 75 94 7.2E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.1E-43 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:1.20.1330.10 53 169 6.8E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:1.20.1330.10 270 325 6.8E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 Pfam PF00700 Bacterial flagellin C-terminal helical region 284 368 2.5E-32 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPTB_RS09425 777a75ff8c827836be3d03ec58e7bdd2 369 SUPERFAMILY SSF64518 1 368 1.44E-106 T 22-04-2016 YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 Gene3D G3DSA:3.40.640.10 36 285 2.5E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 PANTHER PTHR11601:SF17 6 405 8.0E-194 T 22-04-2016 YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 Pfam PF00266 Aminotransferase class-V 25 394 1.0E-158 T 22-04-2016 IPR000192 Aminotransferase class V domain YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 PANTHER PTHR11601 6 405 8.0E-194 T 22-04-2016 YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 SUPERFAMILY SSF53383 4 401 1.03E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 72.858 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 Gene3D G3DSA:3.90.1150.10 286 400 1.3E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPTB_RS12595 95e5e37c95ebef1b9a76375105a64778 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 1.4E-180 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPTB_RS13495 e216beddb440e18e22a50cb8662f847c 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 2.0E-43 T 22-04-2016 IPR025730 Biofilm regulator BssS YPTB_RS13495 e216beddb440e18e22a50cb8662f847c 84 Pfam PF13991 BssS protein family 11 81 1.5E-38 T 22-04-2016 IPR025730 Biofilm regulator BssS YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 Pfam PF01478 Type IV leader peptidase family 128 235 9.7E-24 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 12 117 7.4E-26 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PANTHER PTHR30487 51 277 7.9E-89 T 22-04-2016 YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PANTHER PTHR30487 5 30 7.9E-89 T 22-04-2016 YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 217 232 1.44E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 205 216 1.44E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 194 204 1.44E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 137 154 1.44E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PANTHER PTHR30487:SF0 51 277 7.9E-89 T 22-04-2016 YPTB_RS16545 f6d615349fa79f8bb5aaef2c49c58214 279 PANTHER PTHR30487:SF0 5 30 7.9E-89 T 22-04-2016 YPTB_RS15280 cf2a73119b33acfe3b75a3c290cfab78 266 SUPERFAMILY SSF53613 5 266 3.74E-77 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS15280 cf2a73119b33acfe3b75a3c290cfab78 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 262 1.6E-99 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YPTB_RS15280 cf2a73119b33acfe3b75a3c290cfab78 266 PANTHER PTHR20858:SF17 1 266 2.6E-116 T 22-04-2016 YPTB_RS15280 cf2a73119b33acfe3b75a3c290cfab78 266 Gene3D G3DSA:3.40.1190.20 6 263 1.9E-97 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS15280 cf2a73119b33acfe3b75a3c290cfab78 266 PANTHER PTHR20858 1 266 2.6E-116 T 22-04-2016 YPTB_RS15280 cf2a73119b33acfe3b75a3c290cfab78 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.8E-92 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 YPTB_RS09105 2b9e9010922e57c059cbed20553c9504 106 Gene3D G3DSA:1.10.10.710 20 78 1.3E-27 T 22-04-2016 IPR009813 Uncharacterised protein family YebG YPTB_RS09105 2b9e9010922e57c059cbed20553c9504 106 Pfam PF07130 YebG protein 1 74 4.7E-35 T 22-04-2016 IPR009813 Uncharacterised protein family YebG YPTB_RS20895 d21e0f919d9be6cccce89d9567f249ae 111 SUPERFAMILY SSF143737 3 107 2.35E-52 T 22-04-2016 YPTB_RS20895 d21e0f919d9be6cccce89d9567f249ae 111 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 7 106 1.7E-51 T 22-04-2016 IPR009320 YagB/YeeU/YfjZ YPTB_RS20895 d21e0f919d9be6cccce89d9567f249ae 111 Gene3D G3DSA:3.30.450.20 16 109 2.9E-50 T 22-04-2016 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 SUPERFAMILY SSF47413 1 59 2.32E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 PANTHER PTHR30146:SF46 1 325 1.8E-248 T 22-04-2016 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:3.40.50.2300 167 322 1.1E-47 T 22-04-2016 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 Pfam PF13377 Periplasmic binding protein-like domain 169 321 2.1E-31 T 22-04-2016 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 5.9E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 PANTHER PTHR30146 1 325 1.8E-248 T 22-04-2016 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 SMART SM00354 1 71 2.2E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 SUPERFAMILY SSF53822 61 324 2.14E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:1.10.260.40 2 57 1.0E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS20205 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:3.40.50.2300 58 166 6.8E-41 T 22-04-2016 YPTB_RS04965 dc87ff17e4cb656d9527b16afe02a46d 75 Pfam PF04400 Protein of unknown function (DUF539) 23 65 1.6E-22 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM YPTB_RS04965 dc87ff17e4cb656d9527b16afe02a46d 75 PANTHER PTHR40691 3 75 8.0E-30 T 22-04-2016 YPTB_RS19875 8ffc9ae31aec777d1f366a4b667dbe23 66 Pfam PF03889 Domain of unknown function 9 45 1.2E-22 T 22-04-2016 IPR005589 Protein of unknown function DUF331 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 SUPERFAMILY SSF161098 521 726 6.93E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 PANTHER PTHR30425 390 509 3.8E-161 T 22-04-2016 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 PANTHER PTHR30425 574 740 3.8E-161 T 22-04-2016 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 PANTHER PTHR30425 12 53 3.8E-161 T 22-04-2016 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 SUPERFAMILY SSF82171 187 404 8.24E-11 T 22-04-2016 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 Gene3D G3DSA:2.130.10.10 184 388 2.9E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 461 733 1.1E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 Gene3D G3DSA:1.10.3720.10 33 55 2.3E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 Gene3D G3DSA:1.10.3720.10 428 516 2.3E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 Gene3D G3DSA:1.10.3720.10 525 738 1.5E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 PANTHER PTHR30425:SF3 390 509 3.8E-161 T 22-04-2016 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 PANTHER PTHR30425:SF3 574 740 3.8E-161 T 22-04-2016 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 PANTHER PTHR30425:SF3 12 53 3.8E-161 T 22-04-2016 YPTB_RS15165 2869e28aa16abb58b87c4213cf225580 743 SUPERFAMILY SSF161098 433 510 9.68E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 5.9E-56 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 Gene3D G3DSA:3.40.50.150 181 372 1.7E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 206 372 3.8E-18 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 PANTHER PTHR11061 8 376 1.7E-260 T 22-04-2016 YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 PANTHER PTHR11061:SF36 8 376 1.7E-260 T 22-04-2016 YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 SUPERFAMILY SSF53335 3 372 1.34E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 1.2E-220 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 81.028 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YPTB_RS07550 82fe40d514a3f7c895ace092a002ffb3 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site YPTB_RS08915 440bf91b0ce8157f136ac3cd84f7178d 79 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 1.6E-48 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ YPTB_RS08915 440bf91b0ce8157f136ac3cd84f7178d 79 ProDom PD060536 YECJ YPO1738 1 79 3.0E-39 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ YPTB_RS10450 634487a75fc9c0634348bac76aee8802 90 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 2.5E-20 T 22-04-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system YPTB_RS09220 d97d4d9aa26d4bdf91890ef298586dda 228 Pfam PF13861 FlgD Tudor-like domain 87 225 5.1E-16 T 22-04-2016 IPR025963 FlgD Tudor-like domain YPTB_RS09220 d97d4d9aa26d4bdf91890ef298586dda 228 Pfam PF13860 FlgD Ig-like domain 117 186 1.4E-23 T 22-04-2016 IPR025965 FlgD Ig-like domain YPTB_RS09220 d97d4d9aa26d4bdf91890ef298586dda 228 PANTHER PTHR30435:SF15 16 228 4.1E-72 T 22-04-2016 YPTB_RS09220 d97d4d9aa26d4bdf91890ef298586dda 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 78 5.8E-24 T 22-04-2016 IPR005648 Flagellar hook capping protein YPTB_RS09220 d97d4d9aa26d4bdf91890ef298586dda 228 PANTHER PTHR30435 16 228 4.1E-72 T 22-04-2016 YPTB_RS02350 56535fcb6f4afc72afb033514c17ac8c 104 SUPERFAMILY SSF103481 5 103 1.83E-21 T 22-04-2016 YPTB_RS02350 56535fcb6f4afc72afb033514c17ac8c 104 PANTHER PTHR30561 1 104 8.5E-54 T 22-04-2016 YPTB_RS02350 56535fcb6f4afc72afb033514c17ac8c 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.1E-32 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPTB_RS02350 56535fcb6f4afc72afb033514c17ac8c 104 PANTHER PTHR30561:SF0 1 104 8.5E-54 T 22-04-2016 YPTB_RS11925 210d14eda38b7fc08035e64a00ad1183 514 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 470 1.1E-141 T 22-04-2016 IPR010352 Protein of unknown function DUF945 YPTB_RS06525 ac4de76645876135c98894a466816851 259 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 36 255 1.7E-79 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 YPTB_RS06525 ac4de76645876135c98894a466816851 259 Pfam PF13531 Bacterial extracellular solute-binding protein 31 256 5.9E-46 T 22-04-2016 YPTB_RS06525 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 219 259 9.1E-15 T 22-04-2016 YPTB_RS06525 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 30 111 9.1E-15 T 22-04-2016 YPTB_RS06525 ac4de76645876135c98894a466816851 259 PIRSF PIRSF004846 2 259 1.1E-77 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 YPTB_RS06525 ac4de76645876135c98894a466816851 259 SUPERFAMILY SSF53850 29 258 1.14E-68 T 22-04-2016 YPTB_RS06525 ac4de76645876135c98894a466816851 259 PANTHER PTHR30632 8 258 2.4E-77 T 22-04-2016 YPTB_RS06525 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 112 218 2.3E-44 T 22-04-2016 YPTB_RS06525 ac4de76645876135c98894a466816851 259 PANTHER PTHR30632:SF0 8 258 2.4E-77 T 22-04-2016 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 PANTHER PTHR11689 1 459 6.2E-221 T 22-04-2016 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 Pfam PF00654 Voltage gated chloride channel 90 437 3.6E-89 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 PANTHER PTHR11689:SF96 1 459 6.2E-221 T 22-04-2016 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 47.957 T 22-04-2016 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 PRINTS PR00762 Chloride channel signature 102 119 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 PRINTS PR00762 Chloride channel signature 405 424 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 PRINTS PR00762 Chloride channel signature 387 403 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 PRINTS PR00762 Chloride channel signature 183 202 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 PRINTS PR00762 Chloride channel signature 352 372 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 SUPERFAMILY SSF81340 23 453 7.72E-110 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPTB_RS04140 bd45311dd88b9589322f027cd1769454 478 Gene3D G3DSA:1.10.3080.10 27 452 3.8E-100 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPTB_RS11085 b8b12049734f7e950c0c0409739d07e3 186 Pfam PF02613 Nitrate reductase delta subunit 37 147 1.3E-14 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS11085 b8b12049734f7e950c0c0409739d07e3 186 PIRSF PIRSF004690 1 184 3.2E-62 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type YPTB_RS11085 b8b12049734f7e950c0c0409739d07e3 186 PANTHER PTHR34227 1 186 7.8E-90 T 22-04-2016 YPTB_RS11085 b8b12049734f7e950c0c0409739d07e3 186 PANTHER PTHR34227:SF2 1 186 7.8E-90 T 22-04-2016 YPTB_RS11085 b8b12049734f7e950c0c0409739d07e3 186 SUPERFAMILY SSF89155 2 180 1.11E-47 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS11085 b8b12049734f7e950c0c0409739d07e3 186 Gene3D G3DSA:1.10.3480.10 1 181 5.4E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPTB_RS01110 d28cebf5277e92aaeca9e00f4cb8b3af 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 1.1E-144 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YPTB_RS01110 d28cebf5277e92aaeca9e00f4cb8b3af 374 PANTHER PTHR38043 1 374 4.2E-122 T 22-04-2016 YPTB_RS10695 870cbb58623dcc400c91b9aba5d71bc8 822 Gene3D G3DSA:1.25.40.10 100 209 9.6E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10695 870cbb58623dcc400c91b9aba5d71bc8 822 Gene3D G3DSA:1.25.40.10 414 501 9.6E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10695 870cbb58623dcc400c91b9aba5d71bc8 822 Gene3D G3DSA:1.25.40.10 275 298 9.6E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS10695 870cbb58623dcc400c91b9aba5d71bc8 822 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 822 0.0 T 22-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 YPTB_RS10695 870cbb58623dcc400c91b9aba5d71bc8 822 SUPERFAMILY SSF48452 104 223 2.61E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 25 148 8.3E-36 T 22-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 PANTHER PTHR10209 23 347 1.9E-110 T 22-04-2016 YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 PANTHER PTHR10209:SF146 23 347 1.9E-110 T 22-04-2016 YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 Gene3D G3DSA:2.60.120.330 21 305 3.0E-88 T 22-04-2016 IPR027443 Isopenicillin N synthase-like YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 197 293 8.6E-17 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 PRINTS PR00682 Isopenicillin N synthase signature 218 239 3.8E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 PRINTS PR00682 Isopenicillin N synthase signature 254 280 3.8E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 PRINTS PR00682 Isopenicillin N synthase signature 47 64 3.8E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YPTB_RS07445 c788ceb57b6a7ed5f3c415d4c8fb5743 355 SUPERFAMILY SSF51197 16 305 1.24E-81 T 22-04-2016 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 PANTHER PTHR30034:SF1 43 131 6.9E-14 T 22-04-2016 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 59 127 1.8E-19 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 SUPERFAMILY SSF101801 56 131 2.88E-19 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 56 130 6.6E-26 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 75 91 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 58 74 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 104 119 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 91 104 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 Gene3D G3DSA:2.30.330.10 47 131 2.0E-26 T 22-04-2016 YPTB_RS18120 fd60ab7fa4a82b95b2db792517e4583d 137 PANTHER PTHR30034 43 131 6.9E-14 T 22-04-2016 YPTB_RS15060 6e0878560e3056fc18a40f4347fac13f 289 Pfam PF04228 Putative neutral zinc metallopeptidase 1 286 4.7E-134 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPTB_RS15060 6e0878560e3056fc18a40f4347fac13f 289 PANTHER PTHR30168 2 289 1.4E-157 T 22-04-2016 YPTB_RS03970 b4d6a2d59942a2ee4c8c0157da5c70ed 183 Gene3D G3DSA:3.40.80.10 3 179 1.0E-65 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS03970 b4d6a2d59942a2ee4c8c0157da5c70ed 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 31 166 4.8E-19 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS03970 b4d6a2d59942a2ee4c8c0157da5c70ed 183 PANTHER PTHR30417:SF4 1 182 1.5E-95 T 22-04-2016 YPTB_RS03970 b4d6a2d59942a2ee4c8c0157da5c70ed 183 SMART SM00644 16 166 1.4E-51 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS03970 b4d6a2d59942a2ee4c8c0157da5c70ed 183 SUPERFAMILY SSF55846 2 181 4.45E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPTB_RS03970 b4d6a2d59942a2ee4c8c0157da5c70ed 183 PANTHER PTHR30417 1 182 1.5E-95 T 22-04-2016 YPTB_RS12015 5151cdb1404b7a5ab5ff4de5f042a8ef 189 Pfam PF03553 Na+/H+ antiporter family 13 168 1.3E-33 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 YPTB_RS12015 5151cdb1404b7a5ab5ff4de5f042a8ef 189 PANTHER PTHR33451:SF3 8 182 2.5E-65 T 22-04-2016 YPTB_RS12015 5151cdb1404b7a5ab5ff4de5f042a8ef 189 PANTHER PTHR33451 8 182 2.5E-65 T 22-04-2016 YPTB_RS14300 8f37268ce72bb935874b2253697e2d19 94 Pfam PF04175 Protein of unknown function (DUF406) 4 94 4.0E-40 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 YPTB_RS14300 8f37268ce72bb935874b2253697e2d19 94 Gene3D G3DSA:3.30.70.860 23 94 1.1E-33 T 22-04-2016 YPTB_RS14300 8f37268ce72bb935874b2253697e2d19 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 4.1E-39 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 YPTB_RS14300 8f37268ce72bb935874b2253697e2d19 94 PANTHER PTHR38769:SF1 1 94 7.7E-32 T 22-04-2016 YPTB_RS14300 8f37268ce72bb935874b2253697e2d19 94 PANTHER PTHR38769 1 94 7.7E-32 T 22-04-2016 YPTB_RS11900 ca97f76f4222dd74e15f95701366e127 334 SUPERFAMILY SSF51556 5 326 1.73E-75 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS11900 ca97f76f4222dd74e15f95701366e127 334 Gene3D G3DSA:3.20.20.140 5 330 3.2E-97 T 22-04-2016 YPTB_RS11900 ca97f76f4222dd74e15f95701366e127 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 4.1E-108 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 YPTB_RS11900 ca97f76f4222dd74e15f95701366e127 334 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 22-04-2016 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: REACT_1698 YPTB_RS11900 ca97f76f4222dd74e15f95701366e127 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.457 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPTB_RS11900 ca97f76f4222dd74e15f95701366e127 334 Pfam PF00962 Adenosine/AMP deaminase 6 329 1.1E-94 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 YPTB_RS11900 ca97f76f4222dd74e15f95701366e127 334 PANTHER PTHR11409 5 330 1.2E-102 T 22-04-2016 YPTB_RS09005 07c23e56a12d22fc79c4984bc930474e 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 1.2E-123 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPTB_RS09005 07c23e56a12d22fc79c4984bc930474e 265 PANTHER PTHR32502:SF4 1 265 3.6E-178 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPTB_RS09005 07c23e56a12d22fc79c4984bc930474e 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 4.3E-74 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPTB_RS09005 07c23e56a12d22fc79c4984bc930474e 265 PANTHER PTHR32502 1 265 3.6E-178 T 22-04-2016 YPTB_RS14845 385a023017f1c6f4a848b9069f18dc14 156 SUPERFAMILY SSF51197 1 154 4.67E-47 T 22-04-2016 YPTB_RS14845 385a023017f1c6f4a848b9069f18dc14 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.0E-41 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS14845 385a023017f1c6f4a848b9069f18dc14 156 PANTHER PTHR34986:SF2 2 155 2.5E-95 T 22-04-2016 YPTB_RS14845 385a023017f1c6f4a848b9069f18dc14 156 Gene3D G3DSA:2.60.120.370 1 153 4.4E-50 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS14845 385a023017f1c6f4a848b9069f18dc14 156 PANTHER PTHR34986 2 155 2.5E-95 T 22-04-2016 YPTB_RS14845 385a023017f1c6f4a848b9069f18dc14 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.3E-46 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPTB_RS03145 b92f161a1029b3f0f7b664d7839357ec 387 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 112 350 9.2E-47 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPTB_RS03145 b92f161a1029b3f0f7b664d7839357ec 387 Gene3D G3DSA:3.40.50.2000 208 381 1.9E-46 T 22-04-2016 YPTB_RS03145 b92f161a1029b3f0f7b664d7839357ec 387 PANTHER PTHR30160 37 359 6.3E-101 T 22-04-2016 YPTB_RS03145 b92f161a1029b3f0f7b664d7839357ec 387 SUPERFAMILY SSF53756 39 381 2.26E-78 T 22-04-2016 YPTB_RS03145 b92f161a1029b3f0f7b664d7839357ec 387 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 39 379 1.9E-118 T 22-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YPTB_RS03145 b92f161a1029b3f0f7b664d7839357ec 387 Gene3D G3DSA:3.40.50.2000 39 194 2.3E-42 T 22-04-2016 YPTB_RS03145 b92f161a1029b3f0f7b664d7839357ec 387 PANTHER PTHR30160:SF1 37 359 6.3E-101 T 22-04-2016 YPTB_RS03435 edae3c8722fd57f89f99f9644dd922da 203 PANTHER PTHR30178:SF6 1 203 1.5E-140 T 22-04-2016 YPTB_RS03435 edae3c8722fd57f89f99f9644dd922da 203 PANTHER PTHR30178 1 203 1.5E-140 T 22-04-2016 YPTB_RS03435 edae3c8722fd57f89f99f9644dd922da 203 Pfam PF01184 GPR1/FUN34/yaaH family 4 180 4.6E-44 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 YPTB_RS09715 6ae12a741e90cc7a5dd169b1558a2ffb 760 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 140 520 4.9E-119 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 YPTB_RS14875 e8aaf3cfbb997d1931b5a7516be4e5b9 203 Gene3D G3DSA:2.60.460.10 32 200 2.0E-76 T 22-04-2016 YPTB_RS14875 e8aaf3cfbb997d1931b5a7516be4e5b9 203 Pfam PF06572 Protein of unknown function (DUF1131) 30 199 9.7E-83 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 YPTB_RS14875 e8aaf3cfbb997d1931b5a7516be4e5b9 203 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 24 199 6.0E-101 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 YPTB_RS14945 85b5712bd4f4b6a1a43165f53390bba6 198 SUPERFAMILY SSF55811 10 188 4.6E-50 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS14945 85b5712bd4f4b6a1a43165f53390bba6 198 Pfam PF00293 NUDIX domain 45 169 1.7E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPTB_RS14945 85b5712bd4f4b6a1a43165f53390bba6 198 Gene3D G3DSA:3.90.79.10 5 186 1.3E-58 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPTB_RS14945 85b5712bd4f4b6a1a43165f53390bba6 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 185 5.0E-54 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 YPTB_RS14945 85b5712bd4f4b6a1a43165f53390bba6 198 PANTHER PTHR11839 4 190 8.5E-48 T 22-04-2016 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 SMART SM00382 500 684 3.2E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 SUPERFAMILY SSF90123 147 459 6.8E-66 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 Pfam PF00005 ABC transporter 491 640 8.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 Gene3D G3DSA:3.90.70.10 19 132 5.9E-18 T 22-04-2016 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 PANTHER PTHR24221:SF246 143 710 1.8E-206 T 22-04-2016 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 Gene3D G3DSA:3.40.50.300 474 705 1.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 Gene3D G3DSA:1.20.1560.10 147 458 1.7E-74 T 22-04-2016 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 18 712 0.0 T 22-04-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 Pfam PF00664 ABC transporter transmembrane region 162 428 3.0E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 Pfam PF03412 Peptidase C39 family 21 133 8.7E-7 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 SUPERFAMILY SSF52540 468 710 2.21E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS11855 333f8f0a7af18c399f54580abbe48180 712 PANTHER PTHR24221 143 710 1.8E-206 T 22-04-2016 YPTB_RS21305 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 30 1.0E-10 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS21305 9240acf8a3d6a0bb107ba66b40cbdf89 46 Pfam PF00468 Ribosomal protein L34 1 44 3.7E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS21305 9240acf8a3d6a0bb107ba66b40cbdf89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-26 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS21305 9240acf8a3d6a0bb107ba66b40cbdf89 46 PANTHER PTHR14503 1 46 8.9E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS21305 9240acf8a3d6a0bb107ba66b40cbdf89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.553 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS21305 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS17330 65ea3f39724f7775a525d6de856e69ca 250 Pfam PF01435 Peptidase family M48 79 245 1.0E-24 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPTB_RS17330 65ea3f39724f7775a525d6de856e69ca 250 Gene3D G3DSA:3.30.2010.10 65 146 2.4E-21 T 22-04-2016 YPTB_RS17330 65ea3f39724f7775a525d6de856e69ca 250 PANTHER PTHR22726:SF4 1 250 2.8E-154 T 22-04-2016 YPTB_RS17330 65ea3f39724f7775a525d6de856e69ca 250 PANTHER PTHR22726 1 250 2.8E-154 T 22-04-2016 YPTB_RS14115 b531f12012cd28744158f453e97542d4 418 PANTHER PTHR33843:SF4 1 418 8.2E-253 T 22-04-2016 YPTB_RS14115 b531f12012cd28744158f453e97542d4 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 2.9E-149 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 YPTB_RS14115 b531f12012cd28744158f453e97542d4 418 PANTHER PTHR33843 1 418 8.2E-253 T 22-04-2016 YPTB_RS10915 c676c6fdce269671520e6fe9d032c54a 140 PANTHER PTHR33570:SF1 22 140 5.4E-70 T 22-04-2016 YPTB_RS10915 c676c6fdce269671520e6fe9d032c54a 140 PANTHER PTHR33570 22 140 5.4E-70 T 22-04-2016 YPTB_RS10915 c676c6fdce269671520e6fe9d032c54a 140 SUPERFAMILY SSF69118 34 138 1.31E-30 T 22-04-2016 IPR029032 AhpD-like YPTB_RS10915 c676c6fdce269671520e6fe9d032c54a 140 Gene3D G3DSA:1.20.1290.10 35 139 4.5E-27 T 22-04-2016 IPR029032 AhpD-like YPTB_RS10915 c676c6fdce269671520e6fe9d032c54a 140 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 134 1.3E-22 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YPTB_RS20630 b6e8b24e532302231de03937f643c6cc 256 Gene3D G3DSA:3.40.50.150 60 249 1.4E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20630 b6e8b24e532302231de03937f643c6cc 256 SUPERFAMILY SSF53335 9 249 1.2E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS20630 b6e8b24e532302231de03937f643c6cc 256 Pfam PF04445 Putative SAM-dependent methyltransferase 22 249 1.1E-107 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YPTB_RS20630 b6e8b24e532302231de03937f643c6cc 256 Gene3D G3DSA:3.40.1630.10 5 59 1.5E-26 T 22-04-2016 YPTB_RS20630 b6e8b24e532302231de03937f643c6cc 256 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 6 251 38.124 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YPTB_RS20630 b6e8b24e532302231de03937f643c6cc 256 PANTHER PTHR36112:SF1 3 256 7.2E-154 T 22-04-2016 YPTB_RS20630 b6e8b24e532302231de03937f643c6cc 256 PANTHER PTHR36112 3 256 7.2E-154 T 22-04-2016 YPTB_RS20370 06dc8a80f190855b1b1a7a7d03d50f2a 75 SMART SM00899 1 72 4.1E-7 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YPTB_RS20370 06dc8a80f190855b1b1a7a7d03d50f2a 75 PANTHER PTHR33238 3 75 3.5E-22 T 22-04-2016 YPTB_RS20370 06dc8a80f190855b1b1a7a7d03d50f2a 75 SUPERFAMILY SSF50037 6 70 3.36E-14 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal YPTB_RS20370 06dc8a80f190855b1b1a7a7d03d50f2a 75 Pfam PF04023 FeoA domain 8 63 2.9E-6 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YPTB_RS02790 15fd16183de4dc73b238fb8e97643066 122 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 24 113 3.6E-20 T 22-04-2016 IPR009241 Toxin HigB-like YPTB_RS21050 12cf97f7b4730a03600f57d988010042 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 40.191 T 22-04-2016 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 UniPathway: UPA00566 YPTB_RS21050 12cf97f7b4730a03600f57d988010042 330 Pfam PF01757 Acyltransferase family 6 317 5.4E-31 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 YPTB_RS08365 873d416aad289cfbd167c68fca48d092 383 PANTHER PTHR23537:SF1 3 382 5.3E-53 T 22-04-2016 YPTB_RS08365 873d416aad289cfbd167c68fca48d092 383 PANTHER PTHR23537 3 382 5.3E-53 T 22-04-2016 YPTB_RS08365 873d416aad289cfbd167c68fca48d092 383 Gene3D G3DSA:1.20.1250.20 9 181 4.1E-12 T 22-04-2016 YPTB_RS08365 873d416aad289cfbd167c68fca48d092 383 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 3.9E-88 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB YPTB_RS08365 873d416aad289cfbd167c68fca48d092 383 SUPERFAMILY SSF103473 6 377 1.96E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS09925 0dcd27f6eef158cd2078f982ea3ff471 152 SMART SM00990 30 134 1.8E-13 T 22-04-2016 IPR014883 VRR-NUC domain GO:0016788 YPTB_RS09925 0dcd27f6eef158cd2078f982ea3ff471 152 Pfam PF08774 VRR-NUC domain 32 132 5.5E-14 T 22-04-2016 IPR014883 VRR-NUC domain GO:0016788 YPTB_RS15320 47c7bfeb13cca36f4f00f35af3b46100 159 PANTHER PTHR34319 1 159 4.6E-81 T 22-04-2016 YPTB_RS15320 47c7bfeb13cca36f4f00f35af3b46100 159 Gene3D G3DSA:2.30.110.20 1 152 1.9E-20 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS15320 47c7bfeb13cca36f4f00f35af3b46100 159 SUPERFAMILY SSF141452 5 158 1.02E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS15320 47c7bfeb13cca36f4f00f35af3b46100 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 157 1.1E-60 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS15320 47c7bfeb13cca36f4f00f35af3b46100 159 Pfam PF05638 Type VI secretion system effector, Hcp 28 143 8.8E-24 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPTB_RS10710 3a3b38d81d34ee48de9ef1b5fdf9ae37 155 Pfam PF13994 PgaD-like protein 5 134 1.5E-36 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 YPTB_RS10710 3a3b38d81d34ee48de9ef1b5fdf9ae37 155 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 137 7.0E-68 T 22-04-2016 YPTB_RS10710 3a3b38d81d34ee48de9ef1b5fdf9ae37 155 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 4 138 4.0E-40 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 YPTB_RS12635 2a23e27f0094943077626fe2ef86c6c9 367 Pfam PF01594 Domain of unknown function DUF20 17 346 8.2E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPTB_RS12635 2a23e27f0094943077626fe2ef86c6c9 367 PANTHER PTHR21716 1 366 4.3E-177 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPTB_RS12635 2a23e27f0094943077626fe2ef86c6c9 367 PANTHER PTHR21716:SF20 1 366 4.3E-177 T 22-04-2016 YPTB_RS01195 89d3aea2faf63f3ace63ceff76ad1b27 316 Gene3D G3DSA:1.20.58.340 240 316 1.8E-28 T 22-04-2016 YPTB_RS01195 89d3aea2faf63f3ace63ceff76ad1b27 316 Pfam PF01544 CorA-like Mg2+ transporter protein 25 312 1.3E-53 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YPTB_RS01195 89d3aea2faf63f3ace63ceff76ad1b27 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 22-04-2016 YPTB_RS01195 89d3aea2faf63f3ace63ceff76ad1b27 316 PANTHER PTHR21535 7 316 9.4E-166 T 22-04-2016 YPTB_RS01195 89d3aea2faf63f3ace63ceff76ad1b27 316 SUPERFAMILY SSF143865 1 255 7.85E-37 T 22-04-2016 YPTB_RS01195 89d3aea2faf63f3ace63ceff76ad1b27 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 316 1.2E-106 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 YPTB_RS01195 89d3aea2faf63f3ace63ceff76ad1b27 316 PANTHER PTHR21535:SF37 7 316 9.4E-166 T 22-04-2016 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 PANTHER PTHR10438 3 108 6.9E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 Gene3D G3DSA:3.40.30.10 2 107 3.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 PIRSF PIRSF000077 2 108 3.3E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.1E-10 T 22-04-2016 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.1E-10 T 22-04-2016 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.1E-10 T 22-04-2016 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 9.3E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 Pfam PF00085 Thioredoxin 5 106 5.1E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YPTB_RS01010 d35a787a906916ffd87744da48c7208c 108 SUPERFAMILY SSF52833 2 107 1.03E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 Pfam PF12849 PBP superfamily domain 23 306 5.5E-61 T 22-04-2016 IPR024370 PBP domain YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 PANTHER PTHR30570 1 340 2.4E-135 T 22-04-2016 YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 Gene3D G3DSA:3.40.190.10 27 177 1.7E-55 T 22-04-2016 YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 Gene3D G3DSA:3.40.190.10 181 338 8.1E-36 T 22-04-2016 YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 PANTHER PTHR30570:SF0 1 340 2.4E-135 T 22-04-2016 YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 9.2E-128 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 PIRSF PIRSF002756 1 338 9.7E-105 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YPTB_RS21390 f80e62d218e1d46734910de6fa285a29 346 SUPERFAMILY SSF53850 28 339 3.31E-95 T 22-04-2016 YPTB_RS11395 6f7133561740e213e9fda12890c959b7 256 PANTHER PTHR38776 2 255 1.3E-96 T 22-04-2016 YPTB_RS11395 6f7133561740e213e9fda12890c959b7 256 Pfam PF06629 MltA-interacting protein MipA 35 255 1.5E-55 T 22-04-2016 IPR010583 MltA-interacting MipA YPTB_RS11395 6f7133561740e213e9fda12890c959b7 256 Gene3D G3DSA:2.40.160.20 162 236 2.2E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS10715 d0eeb1f399316b150f83cfcc78dd6b01 236 PANTHER PTHR13256:SF22 7 221 1.5E-102 T 22-04-2016 YPTB_RS10715 d0eeb1f399316b150f83cfcc78dd6b01 236 PANTHER PTHR13256 7 221 1.5E-102 T 22-04-2016 YPTB_RS10715 d0eeb1f399316b150f83cfcc78dd6b01 236 Gene3D G3DSA:3.40.630.30 16 213 6.3E-51 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10715 d0eeb1f399316b150f83cfcc78dd6b01 236 SUPERFAMILY SSF55729 26 198 2.6E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS10715 d0eeb1f399316b150f83cfcc78dd6b01 236 Pfam PF13302 Acetyltransferase (GNAT) domain 49 174 2.6E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS05265 d6def7e7622e1b6429d225298cf11e17 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 6.3E-19 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 YPTB_RS05265 d6def7e7622e1b6429d225298cf11e17 110 PANTHER PTHR36835 1 110 8.5E-43 T 22-04-2016 YPTB_RS05265 d6def7e7622e1b6429d225298cf11e17 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.0E-39 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 YPTB_RS00820 b6f5aae124cdecea55536015df89bb56 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.4E-39 T 22-04-2016 IPR007335 Protein of unknown function DUF413 YPTB_RS18250 e68cccd444b67291db2db9573c0ade4e 277 Pfam PF00482 Type II secretion system (T2SS), protein F 135 263 5.5E-10 T 22-04-2016 IPR018076 Type II secretion system F domain YPTB_RS18250 e68cccd444b67291db2db9573c0ade4e 277 PANTHER PTHR35007 1 274 9.6E-84 T 22-04-2016 YPTB_RS18250 e68cccd444b67291db2db9573c0ade4e 277 PANTHER PTHR35007:SF2 1 274 9.6E-84 T 22-04-2016 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PANTHER PTHR30381:SF1 1 352 1.1E-217 T 22-04-2016 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PANTHER PTHR30381 1 352 1.1E-217 T 22-04-2016 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 9 24 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 24 39 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 239 251 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 108 126 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 43 58 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 69 88 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 175 193 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 91 108 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 PRINTS PR01010 Flagellar P-ring protein signature 149 167 8.9E-72 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 Pfam PF02119 Flagellar P-ring protein 12 351 4.0E-130 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS18025 6c0804d48742f9132ac21ca801e42345 352 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 352 34.976 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPTB_RS09510 fde7dc77451ce80b1e9e96103bcd7328 474 ProSitePatterns PS00218 Amino acid permeases signature. 55 85 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPTB_RS09510 fde7dc77451ce80b1e9e96103bcd7328 474 PIRSF PIRSF006060 4 472 6.4E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS09510 fde7dc77451ce80b1e9e96103bcd7328 474 Pfam PF00324 Amino acid permease 30 467 7.2E-114 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPTB_RS09510 fde7dc77451ce80b1e9e96103bcd7328 474 PANTHER PTHR11785:SF336 3 469 3.2E-218 T 22-04-2016 YPTB_RS09510 fde7dc77451ce80b1e9e96103bcd7328 474 PANTHER PTHR11785 3 469 3.2E-218 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPTB_RS10510 4039277dcd145d3964cef0d475e612bf 275 Gene3D G3DSA:1.10.3720.10 11 263 4.9E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS10510 4039277dcd145d3964cef0d475e612bf 275 PANTHER PTHR32243 11 275 6.4E-139 T 22-04-2016 YPTB_RS10510 4039277dcd145d3964cef0d475e612bf 275 PANTHER PTHR32243:SF11 11 275 6.4E-139 T 22-04-2016 YPTB_RS10510 4039277dcd145d3964cef0d475e612bf 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 270 2.8E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS10510 4039277dcd145d3964cef0d475e612bf 275 SUPERFAMILY SSF161098 11 275 5.23E-69 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 Gene3D G3DSA:3.40.50.720 4 226 1.1E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 Pfam PF00106 short chain dehydrogenase 7 187 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 SUPERFAMILY SSF51735 6 226 6.47E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322:SF343 10 128 9.2E-73 T 22-04-2016 YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322:SF343 148 180 9.2E-73 T 22-04-2016 YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322 10 128 9.2E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS05125 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322 148 180 9.2E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 SUPERFAMILY SSF56796 3 380 5.89E-122 T 22-04-2016 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 7.5E-172 T 22-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 Gene3D G3DSA:1.20.1090.10 184 382 8.6E-72 T 22-04-2016 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 PANTHER PTHR11496 1 382 1.6E-240 T 22-04-2016 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 PANTHER PTHR11496:SF74 1 382 1.6E-240 T 22-04-2016 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 4.1E-117 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPTB_RS02210 09634621db73c88f8c5479ccf25f894b 382 Gene3D G3DSA:3.40.50.1970 2 183 5.7E-56 T 22-04-2016 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 69 4.7E-23 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 Pfam PF02609 Exonuclease VII small subunit 15 66 2.7E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 PIRSF PIRSF006488 2 84 4.5E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 16.129 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 Gene3D G3DSA:1.10.287.1040 10 82 5.1E-29 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 PANTHER PTHR34137 2 84 7.5E-29 T 22-04-2016 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 SUPERFAMILY SSF116842 9 75 4.71E-21 T 22-04-2016 YPTB_RS05225 20ee1947b3d7ffa5d4092b75adc36825 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 14 56 3.0E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS10505 388a2ca9030913d0edc14e5fde31e936 286 PANTHER PTHR30406 1 286 6.9E-125 T 22-04-2016 YPTB_RS10505 388a2ca9030913d0edc14e5fde31e936 286 PANTHER PTHR30406:SF2 1 286 6.9E-125 T 22-04-2016 YPTB_RS10505 388a2ca9030913d0edc14e5fde31e936 286 Gene3D G3DSA:1.10.3720.10 56 284 3.3E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS10505 388a2ca9030913d0edc14e5fde31e936 286 SUPERFAMILY SSF161098 51 275 1.44E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS10505 388a2ca9030913d0edc14e5fde31e936 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 276 3.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS10175 c60463b1c666902f1883d15056088114 148 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 2 140 1.3E-35 T 22-04-2016 IPR006522 Phage virion morphogensis protein YPTB_RS10175 c60463b1c666902f1883d15056088114 148 Pfam PF05069 Phage virion morphogenesis family 3 146 8.1E-38 T 22-04-2016 IPR006522 Phage virion morphogensis protein YPTB_RS11910 470fe9c1fc03b228de560b2b13a61b46 309 Gene3D G3DSA:3.20.20.70 51 209 7.2E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS11910 470fe9c1fc03b228de560b2b13a61b46 309 SUPERFAMILY SSF51395 48 276 2.27E-6 T 22-04-2016 YPTB_RS04350 c0203ddbab5df839d05bdce451b24b19 224 SMART SM01120 43 216 1.4E-67 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YPTB_RS04350 c0203ddbab5df839d05bdce451b24b19 224 SUPERFAMILY SSF101473 21 217 1.83E-50 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YPTB_RS04350 c0203ddbab5df839d05bdce451b24b19 224 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 22 215 5.8E-47 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- YPTB_RS04350 c0203ddbab5df839d05bdce451b24b19 224 Pfam PF02734 DAK2 domain 43 215 1.6E-51 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YPTB_RS04350 c0203ddbab5df839d05bdce451b24b19 224 PANTHER PTHR28629 1 220 8.4E-81 T 22-04-2016 YPTB_RS13860 42f2c3f0345699187100f46055d36477 86 Gene3D G3DSA:3.30.1660.10 18 86 3.6E-27 T 22-04-2016 IPR025543 Dodecin-like YPTB_RS13860 42f2c3f0345699187100f46055d36477 86 PANTHER PTHR34156:SF1 2 86 1.4E-54 T 22-04-2016 YPTB_RS13860 42f2c3f0345699187100f46055d36477 86 SUPERFAMILY SSF159871 3 86 3.4E-26 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS13860 42f2c3f0345699187100f46055d36477 86 PANTHER PTHR34156 2 86 1.4E-54 T 22-04-2016 YPTB_RS13860 42f2c3f0345699187100f46055d36477 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 1.1E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 PANTHER PTHR22642 1 404 5.8E-161 T 22-04-2016 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 42.98 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 PANTHER PTHR22642:SF1 1 404 5.8E-161 T 22-04-2016 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 404 1.7E-170 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 SUPERFAMILY SSF51338 367 404 1.68E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 SUPERFAMILY SSF51338 6 66 1.68E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 Pfam PF01979 Amidohydrolase family 64 402 1.2E-14 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 Gene3D G3DSA:2.30.40.10 24 77 6.7E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 Gene3D G3DSA:3.20.20.140 78 362 1.8E-38 T 22-04-2016 YPTB_RS10785 cc7615a69c8ac7340272a70f25873f89 406 SUPERFAMILY SSF51556 66 366 1.43E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPTB_RS10145 dc19118c60444825f8eead104a41748b 202 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 3.4E-50 T 22-04-2016 IPR006521 Tail protein I YPTB_RS10145 dc19118c60444825f8eead104a41748b 202 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 141 1.8E-57 T 22-04-2016 IPR006521 Tail protein I YPTB_RS02595 2dea81a7ed3ffd7fade23a0e7fea99ef 578 Pfam PF07244 Surface antigen variable number repeat 190 253 6.8E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPTB_RS02595 2dea81a7ed3ffd7fade23a0e7fea99ef 578 Pfam PF01103 Surface antigen 336 575 6.0E-31 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 YPTB_RS02595 2dea81a7ed3ffd7fade23a0e7fea99ef 578 PANTHER PTHR12815:SF12 1 578 4.5E-297 T 22-04-2016 YPTB_RS02595 2dea81a7ed3ffd7fade23a0e7fea99ef 578 Gene3D G3DSA:2.40.160.50 298 575 1.1E-26 T 22-04-2016 YPTB_RS02595 2dea81a7ed3ffd7fade23a0e7fea99ef 578 PANTHER PTHR12815 1 578 4.5E-297 T 22-04-2016 YPTB_RS13040 7281f707051d42cbc207aac299893beb 214 PANTHER PTHR22617 16 214 9.3E-144 T 22-04-2016 YPTB_RS13040 7281f707051d42cbc207aac299893beb 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 3.5E-76 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPTB_RS13040 7281f707051d42cbc207aac299893beb 214 PANTHER PTHR22617:SF32 16 214 9.3E-144 T 22-04-2016 YPTB_RS13040 7281f707051d42cbc207aac299893beb 214 SUPERFAMILY SSF75708 13 213 2.35E-65 T 22-04-2016 YPTB_RS13040 7281f707051d42cbc207aac299893beb 214 Gene3D G3DSA:1.10.287.500 35 168 6.5E-56 T 22-04-2016 YPTB_RS13040 7281f707051d42cbc207aac299893beb 214 PIRSF PIRSF002884 1 214 1.2E-87 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPTB_RS13040 7281f707051d42cbc207aac299893beb 214 Gene3D G3DSA:1.20.5.590 1 34 1.1E-18 T 22-04-2016 YPTB_RS02260 b86a7f3a413f01b980824643ef677b97 141 SUPERFAMILY SSF50203 19 130 1.23E-40 T 22-04-2016 IPR008992 Enterotoxin GO:0009405 YPTB_RS02260 b86a7f3a413f01b980824643ef677b97 141 Gene3D G3DSA:2.40.50.110 20 128 6.0E-22 T 22-04-2016 YPTB_RS19055 6648d6fb917f2e7e1522a3d21e929031 324 PANTHER PTHR10846 1 317 2.7E-87 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 YPTB_RS19055 6648d6fb917f2e7e1522a3d21e929031 324 Pfam PF01699 Sodium/calcium exchanger protein 175 317 5.2E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPTB_RS19055 6648d6fb917f2e7e1522a3d21e929031 324 Pfam PF01699 Sodium/calcium exchanger protein 5 144 1.3E-29 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPTB_RS19055 6648d6fb917f2e7e1522a3d21e929031 324 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 9.6E-89 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 2.9E-131 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 SUPERFAMILY SSF111337 1 343 3.92E-137 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 8.4E-159 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 Gene3D G3DSA:2.40.10.240 64 142 2.3E-18 T 22-04-2016 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 Gene3D G3DSA:3.40.1780.10 179 343 2.0E-100 T 22-04-2016 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 Gene3D G3DSA:3.40.1780.10 1 62 2.0E-100 T 22-04-2016 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.805 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 PANTHER PTHR30307:SF0 2 350 7.1E-190 T 22-04-2016 YPTB_RS05150 32ec14cff852d42cea31b40182cd6c3b 356 PANTHER PTHR30307 2 350 7.1E-190 T 22-04-2016 YPTB_RS14280 d59b642150930aceec0c161a0cf55674 176 SMART SM00463 95 173 5.1E-18 T 22-04-2016 IPR002625 Smr domain YPTB_RS14280 d59b642150930aceec0c161a0cf55674 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 39.916 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 YPTB_RS14280 d59b642150930aceec0c161a0cf55674 176 SUPERFAMILY SSF160443 95 150 1.16E-9 T 22-04-2016 IPR002625 Smr domain YPTB_RS14280 d59b642150930aceec0c161a0cf55674 176 Pfam PF01713 Smr domain 98 170 1.0E-17 T 22-04-2016 IPR002625 Smr domain YPTB_RS14280 d59b642150930aceec0c161a0cf55674 176 PANTHER PTHR35562 1 176 4.1E-119 T 22-04-2016 YPTB_RS14280 d59b642150930aceec0c161a0cf55674 176 PANTHER PTHR35562:SF1 1 176 4.1E-119 T 22-04-2016 YPTB_RS08590 9d0483260b9d4aa2d301f4b125d34352 275 Gene3D G3DSA:3.40.50.720 90 224 2.2E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08590 9d0483260b9d4aa2d301f4b125d34352 275 Gene3D G3DSA:3.40.50.720 2 82 1.9E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08590 9d0483260b9d4aa2d301f4b125d34352 275 PANTHER PTHR10366 3 268 7.6E-75 T 22-04-2016 YPTB_RS08590 9d0483260b9d4aa2d301f4b125d34352 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 4.0E-6 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPTB_RS08590 9d0483260b9d4aa2d301f4b125d34352 275 SUPERFAMILY SSF51735 2 267 1.94E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS08590 9d0483260b9d4aa2d301f4b125d34352 275 PANTHER PTHR10366:SF289 3 268 7.6E-75 T 22-04-2016 YPTB_RS19225 e2b0887e5ba25c7810335f2adef5db76 100 Pfam PF16083 LydA holin phage, holin superfamily III 15 92 1.1E-24 T 22-04-2016 IPR032126 LydA-like holin YPTB_RS13270 15f966197ed190e6a805bf32f36c6ab5 415 PANTHER PTHR30489:SF0 3 415 1.6E-89 T 22-04-2016 YPTB_RS13270 15f966197ed190e6a805bf32f36c6ab5 415 Pfam PF12704 MacB-like periplasmic core domain 28 239 9.3E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPTB_RS13270 15f966197ed190e6a805bf32f36c6ab5 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 4.7E-212 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 YPTB_RS13270 15f966197ed190e6a805bf32f36c6ab5 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 1.8E-158 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YPTB_RS13270 15f966197ed190e6a805bf32f36c6ab5 415 Pfam PF02687 FtsX-like permease family 275 408 8.6E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPTB_RS13270 15f966197ed190e6a805bf32f36c6ab5 415 PANTHER PTHR30489 3 415 1.6E-89 T 22-04-2016 YPTB_RS08460 9c8f6948af758f8f4cf9138c91fa2689 618 PANTHER PTHR30441:SF4 1 618 1.1E-226 T 22-04-2016 YPTB_RS08460 9c8f6948af758f8f4cf9138c91fa2689 618 Pfam PF13502 AsmA-like C-terminal region 359 547 9.3E-21 T 22-04-2016 IPR032712 AsmA-like, C-terminal YPTB_RS08460 9c8f6948af758f8f4cf9138c91fa2689 618 PANTHER PTHR30441 1 618 1.1E-226 T 22-04-2016 YPTB_RS08460 9c8f6948af758f8f4cf9138c91fa2689 618 Pfam PF05170 AsmA family 2 233 9.3E-22 T 22-04-2016 IPR007844 AsmA YPTB_RS18525 5ca4917d81ef65c3c709c8d7e7019ae5 70 Pfam PF02661 Fic/DOC family 2 24 1.7E-6 T 22-04-2016 IPR003812 Fido domain YPTB_RS18525 5ca4917d81ef65c3c709c8d7e7019ae5 70 SUPERFAMILY SSF140931 2 68 2.09E-16 T 22-04-2016 IPR003812 Fido domain YPTB_RS18525 5ca4917d81ef65c3c709c8d7e7019ae5 70 Gene3D G3DSA:1.10.3290.10 1 68 1.1E-17 T 22-04-2016 IPR003812 Fido domain YPTB_RS17415 a154b9e58393e42e7833d1c8b5cf6257 184 PANTHER PTHR33219 3 184 4.4E-85 T 22-04-2016 YPTB_RS17415 a154b9e58393e42e7833d1c8b5cf6257 184 Pfam PF02325 YGGT family 108 172 6.5E-19 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 YPTB_RS17415 a154b9e58393e42e7833d1c8b5cf6257 184 Pfam PF02325 YGGT family 10 76 1.0E-19 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 YPTB_RS17415 a154b9e58393e42e7833d1c8b5cf6257 184 PANTHER PTHR33219:SF5 3 184 4.4E-85 T 22-04-2016 YPTB_RS13995 b65d7d1ca69076ddb0364b64161c8d8d 181 PANTHER PTHR33269:SF2 1 180 1.8E-112 T 22-04-2016 YPTB_RS13995 b65d7d1ca69076ddb0364b64161c8d8d 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 3.8E-33 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 YPTB_RS13995 b65d7d1ca69076ddb0364b64161c8d8d 181 PANTHER PTHR33269 1 180 1.8E-112 T 22-04-2016 YPTB_RS01160 c4e330644aeedcabc03a027930ffe023 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 1.8E-72 T 22-04-2016 IPR007435 Protein of unknown function DUF484 YPTB_RS01160 c4e330644aeedcabc03a027930ffe023 234 PANTHER PTHR38765 2 234 4.5E-95 T 22-04-2016 YPTB_RS18395 bd87ce7bc8f06d5d914f528e3363c602 260 Gene3D G3DSA:3.40.830.10 2 260 8.1E-97 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPTB_RS18395 bd87ce7bc8f06d5d914f528e3363c602 260 PANTHER PTHR30096:SF0 1 260 8.6E-107 T 22-04-2016 YPTB_RS18395 bd87ce7bc8f06d5d914f528e3363c602 260 PANTHER PTHR30096 1 260 8.6E-107 T 22-04-2016 YPTB_RS18395 bd87ce7bc8f06d5d914f528e3363c602 260 SUPERFAMILY SSF53213 5 260 4.97E-92 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPTB_RS18395 bd87ce7bc8f06d5d914f528e3363c602 260 PIRSF PIRSF006157 1 260 3.2E-92 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 YPTB_RS18395 bd87ce7bc8f06d5d914f528e3363c602 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 10 257 2.1E-32 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPTB_RS09500 f364574c1df69f3dbbb2851a2d2594b8 199 PANTHER PTHR30546 1 198 2.8E-141 T 22-04-2016 YPTB_RS09500 f364574c1df69f3dbbb2851a2d2594b8 199 PANTHER PTHR30546:SF10 1 198 2.8E-141 T 22-04-2016 YPTB_RS09500 f364574c1df69f3dbbb2851a2d2594b8 199 Pfam PF03358 NADPH-dependent FMN reductase 13 142 2.4E-12 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YPTB_RS09500 f364574c1df69f3dbbb2851a2d2594b8 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 40.549 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YPTB_RS09500 f364574c1df69f3dbbb2851a2d2594b8 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 1.6E-98 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YPTB_RS09500 f364574c1df69f3dbbb2851a2d2594b8 199 SUPERFAMILY SSF52218 1 198 6.68E-61 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS09500 f364574c1df69f3dbbb2851a2d2594b8 199 Gene3D G3DSA:3.40.50.360 1 199 7.5E-73 T 22-04-2016 IPR029039 Flavoprotein-like domain YPTB_RS06495 719487724b94751c051a9054144e2e87 338 Gene3D G3DSA:3.40.50.720 1 179 5.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS06495 719487724b94751c051a9054144e2e87 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 7.4E-143 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 YPTB_RS06495 719487724b94751c051a9054144e2e87 338 SUPERFAMILY SSF51735 1 336 1.05E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS06495 719487724b94751c051a9054144e2e87 338 Gene3D G3DSA:3.90.25.10 264 337 2.6E-51 T 22-04-2016 YPTB_RS06495 719487724b94751c051a9054144e2e87 338 Gene3D G3DSA:3.90.25.10 180 232 2.6E-51 T 22-04-2016 YPTB_RS06495 719487724b94751c051a9054144e2e87 338 PANTHER PTHR10366 2 336 1.9E-148 T 22-04-2016 YPTB_RS06495 719487724b94751c051a9054144e2e87 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS06495 719487724b94751c051a9054144e2e87 338 PANTHER PTHR10366:SF39 2 336 1.9E-148 T 22-04-2016 YPTB_RS10190 8e4e995009b283b18bac4c21e957791f 131 Gene3D G3DSA:3.30.1380.10 16 78 3.3E-4 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS10190 8e4e995009b283b18bac4c21e957791f 131 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 58 124 6.6E-17 T 22-04-2016 YPTB_RS10190 8e4e995009b283b18bac4c21e957791f 131 SUPERFAMILY SSF55166 6 125 7.85E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS09130 602f1f560b63794d563a2da21eb67472 76 Gene3D G3DSA:1.10.1110.10 1 76 2.2E-40 T 22-04-2016 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPTB_RS09130 602f1f560b63794d563a2da21eb67472 76 SUPERFAMILY SSF46575 1 76 9.94E-36 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPTB_RS09130 602f1f560b63794d563a2da21eb67472 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 6.0E-36 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPTB_RS09130 602f1f560b63794d563a2da21eb67472 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 5.8E-38 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPTB_RS14545 d3deba8417b2e84d169a8e0502299c32 174 Pfam PF09900 Predicted membrane protein (DUF2127) 23 161 2.2E-29 T 22-04-2016 IPR021125 Protein of unknown function DUF2127 YPTB_RS14545 d3deba8417b2e84d169a8e0502299c32 174 PIRSF PIRSF034455 1 170 3.1E-45 T 22-04-2016 IPR014591 Uncharacterised conserved protein UCP034455 YPTB_RS17525 2b45679f54add1949f1d4c6336605702 122 Pfam PF03400 IS1 transposase 2 120 2.0E-46 T 22-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 YPTB_RS17525 2b45679f54add1949f1d4c6336605702 122 PANTHER PTHR33293 1 121 1.7E-46 T 22-04-2016 YPTB_RS15105 d7e5a1d2e190f9ce49c933473ed3d50a 354 PANTHER PTHR21716:SF19 7 353 2.4E-164 T 22-04-2016 YPTB_RS15105 d7e5a1d2e190f9ce49c933473ed3d50a 354 PANTHER PTHR21716 7 353 2.4E-164 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPTB_RS15105 d7e5a1d2e190f9ce49c933473ed3d50a 354 Pfam PF01594 Domain of unknown function DUF20 19 345 1.4E-81 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPTB_RS15125 a7eb306c9077944e09e5665c93cc0ec2 428 Pfam PF00860 Permease family 16 382 7.4E-105 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS15125 a7eb306c9077944e09e5665c93cc0ec2 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 1.4E-127 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YPTB_RS15125 a7eb306c9077944e09e5665c93cc0ec2 428 PANTHER PTHR11119:SF49 1 425 2.5E-176 T 22-04-2016 YPTB_RS15125 a7eb306c9077944e09e5665c93cc0ec2 428 PANTHER PTHR11119 1 425 2.5E-176 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS15125 a7eb306c9077944e09e5665c93cc0ec2 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YPTB_RS15705 aa9260aef32bffa24bdd0b41e6ddac53 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 1.8E-128 T 22-04-2016 IPR009323 Protein of unknown function DUF979 YPTB_RS16125 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 SUPERFAMILY SSF118196 1 230 4.58E-86 T 22-04-2016 IPR023370 TsaA-like domain YPTB_RS16125 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 2.5E-57 T 22-04-2016 IPR023370 TsaA-like domain YPTB_RS16125 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.5E-40 T 22-04-2016 IPR023370 TsaA-like domain YPTB_RS16125 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 PANTHER PTHR12818:SF6 1 235 6.2E-147 T 22-04-2016 YPTB_RS16125 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 PANTHER PTHR12818 1 235 6.2E-147 T 22-04-2016 YPTB_RS16125 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site YPTB_RS16125 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 Gene3D G3DSA:2.40.30.70 5 157 6.4E-52 T 22-04-2016 IPR023370 TsaA-like domain YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 13 408 4.5E-191 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 291 317 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 353 373 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 152 170 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 221 249 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 322 341 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 267 288 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 110 132 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PRINTS PR00174 LacY proton/sugar symporter family signature 75 104 3.8E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 SUPERFAMILY SSF103473 12 407 1.96E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PANTHER PTHR23522:SF3 7 425 8.6E-89 T 22-04-2016 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 PANTHER PTHR23522 7 425 8.6E-89 T 22-04-2016 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 Gene3D G3DSA:1.20.1250.20 8 200 2.4E-39 T 22-04-2016 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 Gene3D G3DSA:1.20.1250.20 216 410 8.0E-42 T 22-04-2016 YPTB_RS08860 9f068cf6292487a03b264f016e6b820a 435 Pfam PF01306 LacY proton/sugar symporter 9 412 3.1E-191 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPTB_RS14965 2a676b788b59f78c675f40622bfdb390 88 PANTHER PTHR38603 1 88 1.6E-36 T 22-04-2016 YPTB_RS14965 2a676b788b59f78c675f40622bfdb390 88 Pfam PF03927 NapD protein 6 81 6.1E-25 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly YPTB_RS18115 bef0dcac7267fa946914b17a0cb0ee84 299 SUPERFAMILY SSF101801 224 284 2.88E-6 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS18115 bef0dcac7267fa946914b17a0cb0ee84 299 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 225 283 2.5E-7 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPTB_RS18115 bef0dcac7267fa946914b17a0cb0ee84 299 Gene3D G3DSA:2.30.330.10 219 256 1.8E-4 T 22-04-2016 YPTB_RS08730 545e7a3d00a63614befb4ca5947122b5 37 SUPERFAMILY SSF68989 1 30 2.22E-9 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPTB_RS08730 545e7a3d00a63614befb4ca5947122b5 37 Gene3D G3DSA:1.20.1280.40 1 30 2.4E-10 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPTB_RS08730 545e7a3d00a63614befb4ca5947122b5 37 Pfam PF05321 Haemolysin expression modulating protein 2 30 8.1E-8 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPTB_RS04600 5a22e148cb1017a56fd3e53400828800 142 PANTHER PTHR30353 5 142 1.9E-57 T 22-04-2016 IPR032818 DedA family YPTB_RS04600 5a22e148cb1017a56fd3e53400828800 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 10 109 2.0E-4 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 YPTB_RS04600 5a22e148cb1017a56fd3e53400828800 142 PANTHER PTHR30353:SF12 5 142 1.9E-57 T 22-04-2016 YPTB_RS17965 b4851d51f020fbfc0ff18447300ba5ba 156 Pfam PF03748 Flagellar basal body-associated protein FliL 57 156 1.9E-10 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 YPTB_RS09595 89a78747199415f28cd0f52a292a1aec 103 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 20 97 1.9E-7 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative YPTB_RS01305 47ac2b8136d5bb9db564377881bc68f7 90 PANTHER PTHR38775 1 90 5.0E-31 T 22-04-2016 YPTB_RS01305 47ac2b8136d5bb9db564377881bc68f7 90 PANTHER PTHR38775:SF1 1 90 5.0E-31 T 22-04-2016 YPTB_RS01305 47ac2b8136d5bb9db564377881bc68f7 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 3.7E-27 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 YPTB_RS04055 762ff53bf9e81eb677881798a57551e5 256 PANTHER PTHR30413 3 255 3.2E-165 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS04055 762ff53bf9e81eb677881798a57551e5 256 PANTHER PTHR30413:SF2 3 255 3.2E-165 T 22-04-2016 YPTB_RS04055 762ff53bf9e81eb677881798a57551e5 256 Pfam PF01061 ABC-2 type transporter 9 218 2.6E-37 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 YPTB_RS04055 762ff53bf9e81eb677881798a57551e5 256 PIRSF PIRSF006648 8 253 1.8E-24 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS04055 762ff53bf9e81eb677881798a57551e5 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.7E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS04055 762ff53bf9e81eb677881798a57551e5 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.7E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS04055 762ff53bf9e81eb677881798a57551e5 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.7E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPTB_RS17110 e3f632eebebc1cd7413dd0fd80c5e3f3 172 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 40 171 1.4E-16 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPTB_RS16535 f4660290045f1ad536586aac648d623f 219 Gene3D G3DSA:1.10.10.10 3 95 3.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16535 f4660290045f1ad536586aac648d623f 219 SUPERFAMILY SSF46894 2 95 1.7E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS16535 f4660290045f1ad536586aac648d623f 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 95 4.4E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS16535 f4660290045f1ad536586aac648d623f 219 SMART SM00862 22 95 2.9E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPTB_RS16535 f4660290045f1ad536586aac648d623f 219 PANTHER PTHR26402:SF589 4 177 2.0E-43 T 22-04-2016 YPTB_RS16535 f4660290045f1ad536586aac648d623f 219 PANTHER PTHR26402 4 177 2.0E-43 T 22-04-2016 YPTB_RS16860 6d38d809e8bb2703043101c4b79a1c1b 510 SUPERFAMILY SSF69369 210 421 7.19E-25 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YPTB_RS16860 6d38d809e8bb2703043101c4b79a1c1b 510 Pfam PF05488 PAAR motif 9 54 8.2E-9 T 22-04-2016 IPR008727 PAAR motif YPTB_RS16860 6d38d809e8bb2703043101c4b79a1c1b 510 PANTHER PTHR37465 466 510 4.3E-68 T 22-04-2016 YPTB_RS16860 6d38d809e8bb2703043101c4b79a1c1b 510 PANTHER PTHR37465 1 350 4.3E-68 T 22-04-2016 YPTB_RS16860 6d38d809e8bb2703043101c4b79a1c1b 510 PANTHER PTHR37465:SF1 466 510 4.3E-68 T 22-04-2016 YPTB_RS16860 6d38d809e8bb2703043101c4b79a1c1b 510 PANTHER PTHR37465:SF1 1 350 4.3E-68 T 22-04-2016 YPTB_RS16860 6d38d809e8bb2703043101c4b79a1c1b 510 Pfam PF06958 S-type Pyocin 269 408 6.6E-40 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YPTB_RS01465 c9919d09adb9b297aac7f2dcc329c28b 253 SUPERFAMILY SSF53167 6 250 1.44E-73 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS01465 c9919d09adb9b297aac7f2dcc329c28b 253 Pfam PF01048 Phosphorylase superfamily 21 241 1.4E-38 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS01465 c9919d09adb9b297aac7f2dcc329c28b 253 PANTHER PTHR21234 1 253 1.7E-197 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPTB_RS01465 c9919d09adb9b297aac7f2dcc329c28b 253 Gene3D G3DSA:3.40.50.1580 5 252 6.4E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPTB_RS01465 c9919d09adb9b297aac7f2dcc329c28b 253 PANTHER PTHR21234:SF22 1 253 1.7E-197 T 22-04-2016 YPTB_RS01465 c9919d09adb9b297aac7f2dcc329c28b 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.7E-128 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 YPTB_RS01465 c9919d09adb9b297aac7f2dcc329c28b 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPTB_RS18365 4d02a3d3b4b4bbdbef1812f1fe0b0b59 141 PANTHER PTHR38774:SF1 1 140 1.3E-61 T 22-04-2016 YPTB_RS18365 4d02a3d3b4b4bbdbef1812f1fe0b0b59 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 2.0E-41 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 YPTB_RS18365 4d02a3d3b4b4bbdbef1812f1fe0b0b59 141 PANTHER PTHR38774 1 140 1.3E-61 T 22-04-2016 YPTB_RS10565 e695325b3c549ce7a0eb5fe3485adf7b 440 SUPERFAMILY SSF100950 4 232 1.6E-32 T 22-04-2016 YPTB_RS10565 e695325b3c549ce7a0eb5fe3485adf7b 440 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 6 195 1.9E-13 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 YPTB_RS10565 e695325b3c549ce7a0eb5fe3485adf7b 440 Gene3D G3DSA:3.40.810.20 207 436 6.9E-46 T 22-04-2016 YPTB_RS10565 e695325b3c549ce7a0eb5fe3485adf7b 440 SUPERFAMILY SSF100950 209 438 3.68E-60 T 22-04-2016 YPTB_RS10565 e695325b3c549ce7a0eb5fe3485adf7b 440 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 283 434 3.5E-60 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPTB_RS10565 e695325b3c549ce7a0eb5fe3485adf7b 440 Gene3D G3DSA:3.40.1080.10 7 194 6.2E-52 T 22-04-2016 YPTB_RS10565 e695325b3c549ce7a0eb5fe3485adf7b 440 PANTHER PTHR21432 1 440 2.0E-187 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 YPTB_RS07565 f7a72c147559f63dbf34bd7e2803f270 308 PANTHER PTHR10264:SF78 3 267 2.6E-45 T 22-04-2016 YPTB_RS07565 f7a72c147559f63dbf34bd7e2803f270 308 Pfam PF01145 SPFH domain / Band 7 family 35 210 1.3E-24 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS07565 f7a72c147559f63dbf34bd7e2803f270 308 PANTHER PTHR10264 3 267 2.6E-45 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPTB_RS07565 f7a72c147559f63dbf34bd7e2803f270 308 SMART SM00244 31 194 0.003 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS07565 f7a72c147559f63dbf34bd7e2803f270 308 SUPERFAMILY SSF117892 62 198 1.31E-13 T 22-04-2016 IPR001107 Band 7 domain YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 SUPERFAMILY SSF53822 258 286 2.53E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 SUPERFAMILY SSF53822 329 656 2.53E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 PANTHER PTHR38038 1 657 4.8E-227 T 22-04-2016 YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Gene3D G3DSA:3.40.50.2300 329 399 1.1E-71 T 22-04-2016 YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Gene3D G3DSA:3.40.50.2300 256 286 1.1E-71 T 22-04-2016 YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Gene3D G3DSA:3.40.50.2300 581 644 1.1E-71 T 22-04-2016 YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 651 37.349 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 PANTHER PTHR38038:SF1 1 657 4.8E-227 T 22-04-2016 YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Pfam PF04348 LppC putative lipoprotein 329 651 2.7E-91 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Pfam PF04348 LppC putative lipoprotein 40 286 1.8E-53 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Gene3D G3DSA:3.40.50.2300 504 580 3.5E-57 T 22-04-2016 YPTB_RS18910 47f567ae9acbae39e003ce755c152ff4 657 Gene3D G3DSA:3.40.50.2300 400 460 3.5E-57 T 22-04-2016 YPTB_RS15340 46ef1e909470006fed1bc72da62405df 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.289 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS15340 46ef1e909470006fed1bc72da62405df 459 PANTHER PTHR30008 2 455 1.9E-197 T 22-04-2016 YPTB_RS15340 46ef1e909470006fed1bc72da62405df 459 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.0E-32 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 YPTB_RS15340 46ef1e909470006fed1bc72da62405df 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 6.3E-137 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YPTB_RS15340 46ef1e909470006fed1bc72da62405df 459 Pfam PF02601 Exonuclease VII, large subunit 126 440 6.2E-101 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 YPTB_RS15340 46ef1e909470006fed1bc72da62405df 459 PANTHER PTHR30008:SF0 2 455 1.9E-197 T 22-04-2016 YPTB_RS12760 d5ce5a01af607ab6f54f1ace5673e1e4 70 Pfam PF13619 KTSC domain 7 64 4.9E-24 T 22-04-2016 IPR025309 KTSC domain YPTB_RS17860 60fd471efef12dd983deb2c0370e022d 518 Pfam PF03806 AbgT putative transporter family 14 514 1.8E-159 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 YPTB_RS17860 60fd471efef12dd983deb2c0370e022d 518 PANTHER PTHR30282 1 517 0.0 T 22-04-2016 YPTB_RS17860 60fd471efef12dd983deb2c0370e022d 518 PANTHER PTHR30282:SF1 1 517 0.0 T 22-04-2016 YPTB_RS16790 c3caf64f95ae27960c546e895f7fa669 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 326 3.3E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS16790 c3caf64f95ae27960c546e895f7fa669 334 PANTHER PTHR32196:SF21 42 334 4.2E-111 T 22-04-2016 YPTB_RS16790 c3caf64f95ae27960c546e895f7fa669 334 PANTHER PTHR32196 42 334 4.2E-111 T 22-04-2016 YPTB_RS20975 de4b615204e74a1ae5efb60313ce8df0 192 Pfam PF01420 Type I restriction modification DNA specificity domain 6 173 1.6E-6 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 YPTB_RS20975 de4b615204e74a1ae5efb60313ce8df0 192 SUPERFAMILY SSF116734 6 190 1.1E-20 T 22-04-2016 YPTB_RS14150 ddab0767949494ef2d41ef0a9fcb44fd 228 Gene3D G3DSA:1.10.3720.10 7 219 4.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14150 ddab0767949494ef2d41ef0a9fcb44fd 228 SUPERFAMILY SSF161098 8 205 4.71E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14150 ddab0767949494ef2d41ef0a9fcb44fd 228 PANTHER PTHR30133:SF1 1 228 9.1E-182 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 YPTB_RS14150 ddab0767949494ef2d41ef0a9fcb44fd 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 3.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS14150 ddab0767949494ef2d41ef0a9fcb44fd 228 PANTHER PTHR30133 1 228 9.1E-182 T 22-04-2016 YPTB_RS14150 ddab0767949494ef2d41ef0a9fcb44fd 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 3.5E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPTB_RS12920 d16741b0b882e8d741ad380e2af2279f 180 SUPERFAMILY SSF49401 28 180 6.96E-26 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS12920 d16741b0b882e8d741ad380e2af2279f 180 Gene3D G3DSA:2.60.40.1090 27 179 8.5E-28 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS12920 d16741b0b882e8d741ad380e2af2279f 180 PANTHER PTHR33420:SF3 2 180 1.2E-62 T 22-04-2016 YPTB_RS12920 d16741b0b882e8d741ad380e2af2279f 180 PANTHER PTHR33420 2 180 1.2E-62 T 22-04-2016 YPTB_RS12920 d16741b0b882e8d741ad380e2af2279f 180 Pfam PF16970 Type-1 fimbrial protein, A 55 180 2.4E-19 T 22-04-2016 YPTB_RS15205 62741bbb48b0b80e2f921158b4f613f2 342 Gene3D G3DSA:3.40.190.10 124 282 4.0E-33 T 22-04-2016 YPTB_RS15205 62741bbb48b0b80e2f921158b4f613f2 342 SUPERFAMILY SSF53850 21 339 1.13E-60 T 22-04-2016 YPTB_RS15205 62741bbb48b0b80e2f921158b4f613f2 342 PANTHER PTHR30222 1 342 4.5E-188 T 22-04-2016 YPTB_RS15205 62741bbb48b0b80e2f921158b4f613f2 342 Pfam PF13416 Bacterial extracellular solute-binding protein 43 306 3.6E-37 T 22-04-2016 YPTB_RS15205 62741bbb48b0b80e2f921158b4f613f2 342 PANTHER PTHR30222:SF2 1 342 4.5E-188 T 22-04-2016 YPTB_RS08835 fbd4a2b90f09b2a0464c30bd021f9900 168 PANTHER PTHR35011:SF2 2 168 5.1E-53 T 22-04-2016 YPTB_RS08835 fbd4a2b90f09b2a0464c30bd021f9900 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 1.8E-22 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component YPTB_RS08835 fbd4a2b90f09b2a0464c30bd021f9900 168 PANTHER PTHR35011 2 168 5.1E-53 T 22-04-2016 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417:SF2 1 111 2.9E-149 T 22-04-2016 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417:SF2 190 425 2.9E-149 T 22-04-2016 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417:SF2 130 140 2.9E-149 T 22-04-2016 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 8.1E-67 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 SUPERFAMILY SSF53756 57 420 2.67E-16 T 22-04-2016 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 Pfam PF00534 Glycosyl transferases group 1 288 398 4.7E-10 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417 1 111 2.9E-149 T 22-04-2016 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417 190 425 2.9E-149 T 22-04-2016 YPTB_RS00360 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417 130 140 2.9E-149 T 22-04-2016 YPTB_RS14425 d403c294ac943a8c9af4f669877573e1 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 447 3.3E-138 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS14425 d403c294ac943a8c9af4f669877573e1 449 PANTHER PTHR35566 1 449 0.0 T 22-04-2016 YPTB_RS14425 d403c294ac943a8c9af4f669877573e1 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 1.1E-140 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS14425 d403c294ac943a8c9af4f669877573e1 449 PANTHER PTHR35566:SF2 1 449 0.0 T 22-04-2016 YPTB_RS18265 8c41ddb53148bd0e376baac73132a3f4 190 Pfam PF16964 Putative tight adherence pilin protein F 8 190 4.3E-40 T 22-04-2016 IPR031582 Putative tight adherence pilin protein F YPTB_RS09695 f965265df4bc55e13922183bad78548d 254 Pfam PF03237 Terminase-like family 43 217 5.7E-17 T 22-04-2016 IPR004921 Terminase, large subunit YPTB_RS07115 a7e755c246dbde3222666c05bf085d50 85 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 76 1.3E-15 T 22-04-2016 IPR018755 Bacteriophage Mu, Gp48 YPTB_RS07115 a7e755c246dbde3222666c05bf085d50 85 PANTHER PTHR40610 3 79 9.8E-47 T 22-04-2016 YPTB_RS14495 6eedc305a050061258aef0d0b6440408 343 Gene3D G3DSA:2.60.40.1090 208 340 9.9E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS14495 6eedc305a050061258aef0d0b6440408 343 SUPERFAMILY SSF49401 207 340 4.97E-18 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS14495 6eedc305a050061258aef0d0b6440408 343 Pfam PF00419 Fimbrial protein 201 342 7.0E-15 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS09825 fcc1c2b01f85f70f6222e2706400a2c8 155 Pfam PF11672 zinc-finger-containing domain 35 150 2.9E-39 T 22-04-2016 IPR021686 Protein of unkown function DUF3268 YPTB_RS07965 2a491254a685e10fab06098518359620 405 PANTHER PTHR30462 1 405 1.0E-276 T 22-04-2016 YPTB_RS07965 2a491254a685e10fab06098518359620 405 PANTHER PTHR30462:SF3 1 405 1.0E-276 T 22-04-2016 YPTB_RS07965 2a491254a685e10fab06098518359620 405 Pfam PF04403 Paraquat-inducible protein A 33 183 1.3E-39 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPTB_RS07965 2a491254a685e10fab06098518359620 405 Pfam PF04403 Paraquat-inducible protein A 236 392 1.1E-53 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPTB_RS07965 2a491254a685e10fab06098518359620 405 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 391 2.1E-152 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 YPTB_RS10300 73418c07295ac7ffecaaa1ddcb8702f4 122 Gene3D G3DSA:1.10.260.40 5 82 1.1E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS10300 73418c07295ac7ffecaaa1ddcb8702f4 122 Pfam PF13560 Helix-turn-helix domain 12 66 3.5E-10 T 22-04-2016 YPTB_RS10300 73418c07295ac7ffecaaa1ddcb8702f4 122 SUPERFAMILY SSF47413 9 76 2.95E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS10300 73418c07295ac7ffecaaa1ddcb8702f4 122 SMART SM00530 15 70 6.4E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 PANTHER PTHR11706:SF42 5 409 3.4E-255 T 22-04-2016 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 Pfam PF01566 Natural resistance-associated macrophage protein 38 382 2.7E-122 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 PANTHER PTHR11706 5 409 3.4E-255 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 20 377 3.9E-98 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS14645 0700a9a2b7f608871b538d01b258d7f5 409 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.303 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPTB_RS01475 b06aa86482f06d844e1e69a1b69df8d1 603 PANTHER PTHR30252:SF3 3 548 5.3E-226 T 22-04-2016 YPTB_RS01475 b06aa86482f06d844e1e69a1b69df8d1 603 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 417 538 1.5E-27 T 22-04-2016 IPR025299 CstA, C-terminal domain YPTB_RS01475 b06aa86482f06d844e1e69a1b69df8d1 603 PANTHER PTHR30252 3 548 5.3E-226 T 22-04-2016 YPTB_RS01475 b06aa86482f06d844e1e69a1b69df8d1 603 Pfam PF02554 Carbon starvation protein CstA 4 367 4.5E-138 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YPTB_RS05285 e66439416b87d761f7e1d31323ca966c 255 SUPERFAMILY SSF111364 26 255 1.27E-32 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YPTB_RS05285 e66439416b87d761f7e1d31323ca966c 255 Gene3D G3DSA:2.40.230.20 21 94 3.5E-5 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YPTB_RS05285 e66439416b87d761f7e1d31323ca966c 255 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 255 9.0E-52 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YPTB_RS08260 15b20c0050f5e7e9cad3f7d2fee079ef 352 Pfam PF05488 PAAR motif 9 64 1.1E-7 T 22-04-2016 IPR008727 PAAR motif YPTB_RS08260 15b20c0050f5e7e9cad3f7d2fee079ef 352 PANTHER PTHR37465:SF1 1 350 5.3E-68 T 22-04-2016 YPTB_RS08260 15b20c0050f5e7e9cad3f7d2fee079ef 352 Pfam PF15607 Bacterial toxin 44 196 303 2.3E-26 T 22-04-2016 IPR028946 Bacterial toxin 44 YPTB_RS08260 15b20c0050f5e7e9cad3f7d2fee079ef 352 PANTHER PTHR37465 1 350 5.3E-68 T 22-04-2016 YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 SUPERFAMILY SSF50331 236 362 4.86E-32 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:3.40.50.300 4 236 3.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:2.40.50.100 239 287 1.1E-21 T 22-04-2016 YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 SUPERFAMILY SSF52540 4 243 2.05E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 SMART SM00382 28 211 7.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 PANTHER PTHR24220:SF572 5 337 4.8E-194 T 22-04-2016 YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:2.40.50.140 288 345 1.6E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 PANTHER PTHR24220 5 337 4.8E-194 T 22-04-2016 YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 Pfam PF08402 TOBE domain 281 353 2.5E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS19695 84b4c9c911659250bc0840e856501387 369 Pfam PF00005 ABC transporter 21 161 3.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS01350 28a21f8131b1ee37012722f45a602b81 308 PANTHER PTHR11795:SF371 7 308 4.5E-150 T 22-04-2016 YPTB_RS01350 28a21f8131b1ee37012722f45a602b81 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.3E-63 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS01350 28a21f8131b1ee37012722f45a602b81 308 PANTHER PTHR11795 7 308 4.5E-150 T 22-04-2016 YPTB_RS16675 9b6eab167574dbcea9942641efcea690 146 Gene3D G3DSA:3.40.50.510 1 132 2.0E-39 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPTB_RS16675 9b6eab167574dbcea9942641efcea690 146 PANTHER PTHR33799:SF1 2 146 2.8E-62 T 22-04-2016 YPTB_RS16675 9b6eab167574dbcea9942641efcea690 146 PANTHER PTHR33799 2 146 2.8E-62 T 22-04-2016 YPTB_RS16675 9b6eab167574dbcea9942641efcea690 146 SUPERFAMILY SSF53062 1 130 1.31E-35 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPTB_RS16675 9b6eab167574dbcea9942641efcea690 146 Pfam PF03610 PTS system fructose IIA component 3 115 6.9E-28 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPTB_RS17030 63464a2941453fd9e0d2a25654e2c425 157 Pfam PF05926 Phage head completion protein (GPL) 24 157 1.9E-36 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 YPTB_RS19635 485f868e3f9e91d268436ef3fbfb2f87 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 445 2.8E-154 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS19635 485f868e3f9e91d268436ef3fbfb2f87 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 446 1.2E-158 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPTB_RS19635 485f868e3f9e91d268436ef3fbfb2f87 448 PANTHER PTHR35566 1 448 3.2E-217 T 22-04-2016 YPTB_RS19635 485f868e3f9e91d268436ef3fbfb2f87 448 PANTHER PTHR35566:SF1 1 448 3.2E-217 T 22-04-2016 YPTB_RS12585 b10956c74c395751ce2282af1d33110e 354 SUPERFAMILY SSF141523 98 235 9.81E-30 T 22-04-2016 YPTB_RS12585 b10956c74c395751ce2282af1d33110e 354 Pfam PF03734 L,D-transpeptidase catalytic domain 100 235 1.1E-19 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YPTB_RS12585 b10956c74c395751ce2282af1d33110e 354 Gene3D G3DSA:2.40.440.10 93 237 3.4E-36 T 22-04-2016 YPTB_RS12585 b10956c74c395751ce2282af1d33110e 354 PANTHER PTHR30582:SF9 53 312 6.9E-127 T 22-04-2016 YPTB_RS12585 b10956c74c395751ce2282af1d33110e 354 PANTHER PTHR30582 53 312 6.9E-127 T 22-04-2016 YPTB_RS09435 8cb6b696444ffe532ff471843371f91a 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 168 1.6E-92 T 22-04-2016 IPR022523 Flagellar regulator, FliZ YPTB_RS09435 8cb6b696444ffe532ff471843371f91a 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 92 167 6.9E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YPTB_RS15160 d3b239b2069c83173c0eebe60beaa165 550 SUPERFAMILY SSF161098 265 533 1.57E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15160 d3b239b2069c83173c0eebe60beaa165 550 Gene3D G3DSA:1.10.3720.10 285 546 1.6E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15160 d3b239b2069c83173c0eebe60beaa165 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 318 546 2.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS15160 d3b239b2069c83173c0eebe60beaa165 550 PANTHER PTHR30425:SF7 191 548 2.2E-200 T 22-04-2016 YPTB_RS15160 d3b239b2069c83173c0eebe60beaa165 550 PANTHER PTHR30425 191 548 2.2E-200 T 22-04-2016 YPTB_RS15160 d3b239b2069c83173c0eebe60beaa165 550 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 282 542 5.1E-74 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 YPTB_RS21150 ce2328ad4d168fe5ea8d309547832428 239 Pfam PF11254 Protein of unknown function (DUF3053) 18 234 3.9E-90 T 22-04-2016 IPR021413 Protein of unknown function DUF3053 YPTB_RS06810 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482 116 358 2.0E-200 T 22-04-2016 YPTB_RS06810 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482 1 94 2.0E-200 T 22-04-2016 YPTB_RS06810 0e08d5d468a7ff9f514ec66b19eed55a 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 5.9E-130 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YPTB_RS06810 0e08d5d468a7ff9f514ec66b19eed55a 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 340 8.3E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS06810 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482:SF4 116 358 2.0E-200 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YPTB_RS06810 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482:SF4 1 94 2.0E-200 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Gene3D G3DSA:3.30.1110.10 45 95 1.1E-6 T 22-04-2016 YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584 17 293 1.6E-207 T 22-04-2016 YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584 332 376 1.6E-207 T 22-04-2016 YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584 393 434 1.6E-207 T 22-04-2016 YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Pfam PF00294 pfkB family carbohydrate kinase 138 297 6.0E-9 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Gene3D G3DSA:3.40.1190.20 337 434 3.8E-47 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Gene3D G3DSA:3.40.1190.20 96 298 3.8E-47 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 SUPERFAMILY SSF53613 36 305 2.96E-45 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 SUPERFAMILY SSF53613 338 416 2.96E-45 T 22-04-2016 IPR029056 Ribokinase-like YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584:SF202 17 293 1.6E-207 T 22-04-2016 YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584:SF202 332 376 1.6E-207 T 22-04-2016 YPTB_RS05600 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584:SF202 393 434 1.6E-207 T 22-04-2016 YPTB_RS10150 114aca4c26678afd8fd0d6d23b0712e0 302 PIRSF PIRSF020481 1 302 1.5E-131 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted YPTB_RS10150 114aca4c26678afd8fd0d6d23b0712e0 302 Pfam PF04865 Baseplate J-like protein 117 261 6.3E-28 T 22-04-2016 IPR006949 Baseplate protein J-like YPTB_RS10150 114aca4c26678afd8fd0d6d23b0712e0 302 PANTHER PTHR35862:SF1 1 302 4.0E-133 T 22-04-2016 YPTB_RS10150 114aca4c26678afd8fd0d6d23b0712e0 302 PANTHER PTHR35862 1 302 4.0E-133 T 22-04-2016 YPTB_RS14640 a142f32255706204a22b688052b4956a 104 Pfam PF10697 Protein of unknown function (DUF2502) 6 93 2.9E-36 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 YPTB_RS00255 b9cebec120d3a1cb6a4ec4abd6106206 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 456 5.0E-140 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YPTB_RS00255 b9cebec120d3a1cb6a4ec4abd6106206 461 PANTHER PTHR11119 1 461 2.3E-289 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS00255 b9cebec120d3a1cb6a4ec4abd6106206 461 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 3.1E-127 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 YPTB_RS00255 b9cebec120d3a1cb6a4ec4abd6106206 461 PANTHER PTHR11119:SF44 1 461 2.3E-289 T 22-04-2016 YPTB_RS00255 b9cebec120d3a1cb6a4ec4abd6106206 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YPTB_RS00255 b9cebec120d3a1cb6a4ec4abd6106206 461 Pfam PF00860 Permease family 33 425 7.9E-109 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 PANTHER PTHR33705 1 84 8.4E-40 T 22-04-2016 YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.7E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.0E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 PANTHER PTHR33705:SF1 1 84 8.4E-40 T 22-04-2016 YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 Gene3D G3DSA:3.30.1340.10 1 83 9.7E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 SUPERFAMILY SSF55594 1 82 7.59E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.1E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.1E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.1E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPTB_RS14725 90698f324e7b2f882bc5dfbfdbc4a362 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB_RS00170 a9b974e1e7afc839dc87cdf4f8cd8d10 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.9E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 YPTB_RS00170 a9b974e1e7afc839dc87cdf4f8cd8d10 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 6.0E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 YPTB_RS19885 eed5df6fad418a9d43e3b4c061d41cae 129 Gene3D G3DSA:3.90.1030.10 1 117 3.1E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19885 eed5df6fad418a9d43e3b4c061d41cae 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.9E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19885 eed5df6fad418a9d43e3b4c061d41cae 129 PANTHER PTHR14413 1 118 1.9E-67 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19885 eed5df6fad418a9d43e3b4c061d41cae 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19885 eed5df6fad418a9d43e3b4c061d41cae 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.048 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19885 eed5df6fad418a9d43e3b4c061d41cae 129 Pfam PF01196 Ribosomal protein L17 20 116 8.9E-35 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS19885 eed5df6fad418a9d43e3b4c061d41cae 129 SUPERFAMILY SSF64263 1 118 3.92E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05015 3c0672d89d34f0e33c3b0e33497fb81c 133 Pfam PF07417 Transcriptional regulator Crl 5 122 3.1E-54 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 YPTB_RS05015 3c0672d89d34f0e33c3b0e33497fb81c 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.56 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 YPTB_RS21030 d390224079604b96da149cfb1356923b 328 Gene3D G3DSA:2.60.40.1090 205 327 1.7E-7 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS21030 d390224079604b96da149cfb1356923b 328 SUPERFAMILY SSF49401 203 327 2.73E-11 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS21030 d390224079604b96da149cfb1356923b 328 Pfam PF00419 Fimbrial protein 194 327 8.9E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS05515 3733a8da1c7c8c240845621e05f545ac 257 SUPERFAMILY SSF53448 1 257 6.47E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS05515 3733a8da1c7c8c240845621e05f545ac 257 PANTHER PTHR22572:SF16 2 257 2.0E-184 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 YPTB_RS05515 3733a8da1c7c8c240845621e05f545ac 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 8.8E-147 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 YPTB_RS05515 3733a8da1c7c8c240845621e05f545ac 257 Pfam PF00483 Nucleotidyl transferase 2 211 6.0E-19 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPTB_RS05515 3733a8da1c7c8c240845621e05f545ac 257 PANTHER PTHR22572 2 257 2.0E-184 T 22-04-2016 YPTB_RS05515 3733a8da1c7c8c240845621e05f545ac 257 Gene3D G3DSA:3.90.550.10 2 256 1.1E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPTB_RS05710 48efc81959648d98ca3bb328f093a5db 70 PANTHER PTHR32319 8 68 2.2E-27 T 22-04-2016 YPTB_RS05710 48efc81959648d98ca3bb328f093a5db 70 Gene3D G3DSA:3.10.290.10 5 68 7.0E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPTB_RS05710 48efc81959648d98ca3bb328f093a5db 70 SUPERFAMILY SSF55174 6 69 7.2E-19 T 22-04-2016 YPTB_RS05710 48efc81959648d98ca3bb328f093a5db 70 Pfam PF13275 S4 domain 8 68 4.9E-22 T 22-04-2016 YPTB_RS13615 ac1089de531579c1117c473d576204a7 334 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 7 333 8.0E-153 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 YPTB_RS13615 ac1089de531579c1117c473d576204a7 334 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 8 330 4.5E-149 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 YPTB_RS20805 ce6b3a076f7eead4a3e9c0f02aea21d6 563 PANTHER PTHR30443 1 562 0.0 T 22-04-2016 YPTB_RS20805 ce6b3a076f7eead4a3e9c0f02aea21d6 563 SUPERFAMILY SSF53649 250 546 3.74E-15 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPTB_RS20805 ce6b3a076f7eead4a3e9c0f02aea21d6 563 Gene3D G3DSA:3.40.720.10 250 541 1.7E-10 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPTB_RS20805 ce6b3a076f7eead4a3e9c0f02aea21d6 563 Pfam PF00884 Sulfatase 250 538 1.1E-39 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPTB_RS20805 ce6b3a076f7eead4a3e9c0f02aea21d6 563 Pfam PF08019 Domain of unknown function (DUF1705) 56 220 1.9E-19 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 YPTB_RS20805 ce6b3a076f7eead4a3e9c0f02aea21d6 563 PANTHER PTHR30443:SF3 1 562 0.0 T 22-04-2016 YPTB_RS02075 76e1801305bc997e28221d785a02713b 345 PANTHER PTHR30238:SF0 216 344 8.3E-141 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YPTB_RS02075 76e1801305bc997e28221d785a02713b 345 PANTHER PTHR30238:SF0 7 194 8.3E-141 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YPTB_RS02075 76e1801305bc997e28221d785a02713b 345 Pfam PF03741 Integral membrane protein TerC family 73 299 2.3E-42 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YPTB_RS02075 76e1801305bc997e28221d785a02713b 345 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 337 5.4E-105 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YPTB_RS02075 76e1801305bc997e28221d785a02713b 345 PANTHER PTHR30238 216 344 8.3E-141 T 22-04-2016 YPTB_RS02075 76e1801305bc997e28221d785a02713b 345 PANTHER PTHR30238 7 194 8.3E-141 T 22-04-2016 YPTB_RS08035 5e3d8a7f80e44ab9e24721ee2ba52e96 148 PANTHER PTHR31503 1 148 2.8E-63 T 22-04-2016 YPTB_RS08035 5e3d8a7f80e44ab9e24721ee2ba52e96 148 Pfam PF03733 Inner membrane component domain 77 127 2.6E-18 T 22-04-2016 IPR005185 Inner membrane component domain YPTB_RS08035 5e3d8a7f80e44ab9e24721ee2ba52e96 148 Pfam PF03733 Inner membrane component domain 4 53 8.4E-9 T 22-04-2016 IPR005185 Inner membrane component domain YPTB_RS08035 5e3d8a7f80e44ab9e24721ee2ba52e96 148 PIRSF PIRSF028777 1 139 3.7E-54 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 YPTB_RS04100 5e495c075582698f02e4b5e3cee53d8d 245 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 2 235 55.748 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YPTB_RS04100 5e495c075582698f02e4b5e3cee53d8d 245 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 231 9.4E-81 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YPTB_RS04100 5e495c075582698f02e4b5e3cee53d8d 245 Pfam PF03749 Sugar fermentation stimulation protein 15 227 5.4E-75 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YPTB_RS04100 5e495c075582698f02e4b5e3cee53d8d 245 PANTHER PTHR30545:SF2 2 243 4.3E-94 T 22-04-2016 YPTB_RS04100 5e495c075582698f02e4b5e3cee53d8d 245 PANTHER PTHR30545 2 243 4.3E-94 T 22-04-2016 YPTB_RS02100 36e459cfbe5aec4ee2042e9ef9651a90 247 PANTHER PTHR30251:SF3 17 247 1.6E-139 T 22-04-2016 YPTB_RS02100 36e459cfbe5aec4ee2042e9ef9651a90 247 SUPERFAMILY SSF49584 165 239 3.79E-5 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPTB_RS02100 36e459cfbe5aec4ee2042e9ef9651a90 247 PANTHER PTHR30251 17 247 1.6E-139 T 22-04-2016 YPTB_RS02100 36e459cfbe5aec4ee2042e9ef9651a90 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 47 158 1.7E-17 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPTB_RS02100 36e459cfbe5aec4ee2042e9ef9651a90 247 SUPERFAMILY SSF49354 43 157 6.98E-16 T 22-04-2016 IPR008962 PapD-like YPTB_RS02100 36e459cfbe5aec4ee2042e9ef9651a90 247 Gene3D G3DSA:2.60.40.360 47 158 6.0E-11 T 22-04-2016 IPR008962 PapD-like YPTB_RS00945 30f58713fc5d7dfe09cfe2e10fcfe9f6 111 Pfam PF10828 Protein of unknown function (DUF2570) 14 108 8.0E-7 T 22-04-2016 IPR022538 Protein of unknown function DUF2570 YPTB_RS16300 3a058a8a7576d4542c8b65993bc223e1 183 Hamap MF_01104 Protein Syd [syd]. 3 181 37.264 T 22-04-2016 IPR009948 Syd GO:0009898 YPTB_RS16300 3a058a8a7576d4542c8b65993bc223e1 183 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.0E-72 T 22-04-2016 IPR009948 Syd GO:0009898 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 SUPERFAMILY SSF53822 30 408 1.3E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 Pfam PF13433 Periplasmic binding protein domain 31 406 1.1E-170 T 22-04-2016 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 2.7E-177 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 PANTHER PTHR30483 1 420 7.9E-233 T 22-04-2016 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 PANTHER PTHR30483:SF8 1 420 7.9E-233 T 22-04-2016 YPTB_RS06800 10be45516879d1bf08bd839e4703c8d5 422 Gene3D G3DSA:3.40.50.2300 146 345 4.3E-72 T 22-04-2016 YPTB_RS16665 35aba4e7588578febe16caa8a0f2949b 262 PANTHER PTHR32502:SF8 2 262 1.8E-135 T 22-04-2016 YPTB_RS16665 35aba4e7588578febe16caa8a0f2949b 262 PANTHER PTHR32502 2 262 1.8E-135 T 22-04-2016 YPTB_RS16665 35aba4e7588578febe16caa8a0f2949b 262 Pfam PF03609 PTS system sorbose-specific iic component 3 233 6.8E-69 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPTB_RS15545 e9c76eb6b3ab48e4d2c8d51f9fdd818d 346 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 1 219 1.0E-119 T 22-04-2016 YPTB_RS15545 e9c76eb6b3ab48e4d2c8d51f9fdd818d 346 Pfam PF13942 YfhG lipoprotein 44 217 6.3E-78 T 22-04-2016 IPR025262 Quorum-sensing regulator protein G YPTB_RS16135 71038f70e3f6eb4af97bdef0935ff4dd 227 Pfam PF17185 NlpE C-terminal OB domain 137 225 1.3E-36 T 22-04-2016 IPR033450 NlpE, C-terminal OB domain YPTB_RS16135 71038f70e3f6eb4af97bdef0935ff4dd 227 Pfam PF04170 NlpE N-terminal domain 38 122 5.5E-26 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE YPTB_RS12450 158dcdefc7d0dbd725fc47e3a71459f2 104 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 94 3.1E-17 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor YPTB_RS12450 158dcdefc7d0dbd725fc47e3a71459f2 104 SUPERFAMILY SSF141488 29 101 1.1E-22 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor YPTB_RS18675 80c04178fe97c79883c3966813bc1b7a 105 Gene3D G3DSA:2.120.10.30 19 72 9.9E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like YPTB_RS10130 ddc215c6c9fb57d74ef05413591c7de4 391 Pfam PF04984 Phage tail sheath protein 3 96 1.8E-13 T 22-04-2016 IPR007067 Tail sheath protein YPTB_RS10130 ddc215c6c9fb57d74ef05413591c7de4 391 Pfam PF04984 Phage tail sheath protein 92 378 3.5E-55 T 22-04-2016 IPR007067 Tail sheath protein YPTB_RS10130 ddc215c6c9fb57d74ef05413591c7de4 391 PANTHER PTHR35861:SF1 4 390 1.9E-129 T 22-04-2016 YPTB_RS10130 ddc215c6c9fb57d74ef05413591c7de4 391 PANTHER PTHR35861 4 390 1.9E-129 T 22-04-2016 YPTB_RS06840 93709ee9d482dfef5209e792997d8f01 310 SUPERFAMILY SSF53850 29 308 4.89E-60 T 22-04-2016 YPTB_RS06840 93709ee9d482dfef5209e792997d8f01 310 PANTHER PTHR30177 31 308 4.5E-123 T 22-04-2016 YPTB_RS06840 93709ee9d482dfef5209e792997d8f01 310 PANTHER PTHR30177:SF12 31 308 4.5E-123 T 22-04-2016 YPTB_RS06840 93709ee9d482dfef5209e792997d8f01 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 303 1.4E-54 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YPTB_RS06840 93709ee9d482dfef5209e792997d8f01 310 Gene3D G3DSA:3.40.190.10 258 309 8.0E-58 T 22-04-2016 YPTB_RS06840 93709ee9d482dfef5209e792997d8f01 310 Gene3D G3DSA:3.40.190.10 27 137 8.0E-58 T 22-04-2016 YPTB_RS06840 93709ee9d482dfef5209e792997d8f01 310 Gene3D G3DSA:3.40.190.120 138 245 1.4E-27 T 22-04-2016 YPTB_RS02580 6f93087d885c75848feda0e9636a1f3f 70 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 6.0E-32 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 YPTB_RS02580 6f93087d885c75848feda0e9636a1f3f 70 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 2.7E-29 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 YPTB_RS02580 6f93087d885c75848feda0e9636a1f3f 70 Gene3D G3DSA:3.30.1910.10 1 64 1.0E-34 T 22-04-2016 YPTB_RS18410 7cd90199f27aa7edd031f861de2aac35 93 Pfam PF04380 Membrane fusogenic activity 1 78 3.0E-28 T 22-04-2016 IPR007475 Membrane fusogenic activity YPTB_RS18410 7cd90199f27aa7edd031f861de2aac35 93 PANTHER PTHR38040:SF1 2 93 4.9E-41 T 22-04-2016 YPTB_RS18410 7cd90199f27aa7edd031f861de2aac35 93 PANTHER PTHR38040 2 93 4.9E-41 T 22-04-2016 YPTB_RS12105 ff7b16d4382888465ae5670101065769 461 Pfam PF15615 TerB-C domain 345 457 1.0E-7 T 22-04-2016 IPR028932 TerB-C domain YPTB_RS12105 ff7b16d4382888465ae5670101065769 461 SUPERFAMILY SSF158682 209 322 2.62E-15 T 22-04-2016 IPR029024 TerB-like YPTB_RS12105 ff7b16d4382888465ae5670101065769 461 Gene3D G3DSA:1.10.3680.10 206 323 1.9E-28 T 22-04-2016 IPR029024 TerB-like YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.4E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.2E-36 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.5E-159 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 26.007 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 PANTHER PTHR22926:SF5 2 360 1.4E-196 T 22-04-2016 YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS03840 60e68760b7314a5bae42de853d152172 360 PANTHER PTHR22926 2 360 1.4E-196 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPTB_RS02460 287688b229177e55911b4c10816a0f22 101 Gene3D G3DSA:2.30.30.100 1 74 1.1E-37 T 22-04-2016 YPTB_RS02460 287688b229177e55911b4c10816a0f22 101 SUPERFAMILY SSF50182 7 69 5.02E-24 T 22-04-2016 IPR010920 LSM domain YPTB_RS02460 287688b229177e55911b4c10816a0f22 101 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YPTB_RS02460 287688b229177e55911b4c10816a0f22 101 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.8E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 PANTHER PTHR30071 1 221 1.2E-93 T 22-04-2016 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 Pfam PF01578 Cytochrome C assembly protein 29 184 1.6E-31 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YPTB_RS14345 78692ee96f2d300a3d20b47a43e37f4c 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 1.4E-82 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPTB_RS15860 3d43688ce27c4d65ec8c7025a938ab33 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 126 18.538 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS15860 3d43688ce27c4d65ec8c7025a938ab33 126 TIGRFAM TIGR00494 crcB: protein CrcB 7 125 2.4E-23 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS15860 3d43688ce27c4d65ec8c7025a938ab33 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 121 3.3E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS15860 3d43688ce27c4d65ec8c7025a938ab33 126 PANTHER PTHR28259 1 126 2.9E-38 T 22-04-2016 YPTB_RS18870 6615b680e0a1bfd4a8d08bebaa96faec 101 PANTHER PTHR35893 1 101 8.4E-76 T 22-04-2016 YPTB_RS18870 6615b680e0a1bfd4a8d08bebaa96faec 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 4.9E-32 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB YPTB_RS18870 6615b680e0a1bfd4a8d08bebaa96faec 101 Gene3D G3DSA:1.20.120.20 8 75 8.2E-5 T 22-04-2016 YPTB_RS18870 6615b680e0a1bfd4a8d08bebaa96faec 101 PANTHER PTHR35893:SF2 1 101 8.4E-76 T 22-04-2016 YPTB_RS14615 76ee7d14e0aaba597f2c7960ae9d92ec 415 PANTHER PTHR30613:SF4 4 413 2.8E-301 T 22-04-2016 YPTB_RS14615 76ee7d14e0aaba597f2c7960ae9d92ec 415 Gene3D G3DSA:2.60.120.330 5 413 6.9E-155 T 22-04-2016 IPR027443 Isopenicillin N synthase-like YPTB_RS14615 76ee7d14e0aaba597f2c7960ae9d92ec 415 SUPERFAMILY SSF51197 3 413 2.84E-153 T 22-04-2016 YPTB_RS14615 76ee7d14e0aaba597f2c7960ae9d92ec 415 Pfam PF07350 Protein of unknown function (DUF1479) 8 412 2.1E-147 T 22-04-2016 IPR010856 Protein of unknown function DUF1479 YPTB_RS14615 76ee7d14e0aaba597f2c7960ae9d92ec 415 PANTHER PTHR30613 4 413 2.8E-301 T 22-04-2016 YPTB_RS05920 ec3fb978818ce036a4ff329ee1dd94f4 309 Pfam PF13407 Periplasmic binding protein domain 24 277 1.0E-54 T 22-04-2016 IPR025997 Periplasmic binding protein YPTB_RS05920 ec3fb978818ce036a4ff329ee1dd94f4 309 PANTHER PTHR32196:SF31 13 262 2.1E-116 T 22-04-2016 YPTB_RS05920 ec3fb978818ce036a4ff329ee1dd94f4 309 PANTHER PTHR32196 13 262 2.1E-116 T 22-04-2016 YPTB_RS05920 ec3fb978818ce036a4ff329ee1dd94f4 309 SUPERFAMILY SSF53822 22 300 5.65E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS05920 ec3fb978818ce036a4ff329ee1dd94f4 309 Gene3D G3DSA:3.40.50.2300 23 139 5.4E-31 T 22-04-2016 YPTB_RS05920 ec3fb978818ce036a4ff329ee1dd94f4 309 Gene3D G3DSA:3.40.50.2300 140 300 2.6E-43 T 22-04-2016 YPTB_RS08030 b8dafbb30f2234851165fec8f1f4f4c9 712 PANTHER PTHR30509 3 711 0.0 T 22-04-2016 YPTB_RS08030 b8dafbb30f2234851165fec8f1f4f4c9 712 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 707 4.0E-290 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK YPTB_RS08030 b8dafbb30f2234851165fec8f1f4f4c9 712 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 707 0.0 T 22-04-2016 IPR010019 Integral membrane protein, YccS YPTB_RS08030 b8dafbb30f2234851165fec8f1f4f4c9 712 Pfam PF13515 Fusaric acid resistance protein-like 408 527 4.0E-23 T 22-04-2016 YPTB_RS08030 b8dafbb30f2234851165fec8f1f4f4c9 712 PANTHER PTHR30509:SF8 3 711 0.0 T 22-04-2016 YPTB_RS08030 b8dafbb30f2234851165fec8f1f4f4c9 712 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 9.5E-114 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal YPTB_RS19465 cf6f1d331209f4789ab1b27376493a8c 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.5E-206 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 YPTB_RS19465 cf6f1d331209f4789ab1b27376493a8c 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 1.1E-79 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YPTB_RS19465 cf6f1d331209f4789ab1b27376493a8c 549 PANTHER PTHR10110 1 539 1.1E-211 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 YPTB_RS19465 cf6f1d331209f4789ab1b27376493a8c 549 PANTHER PTHR10110:SF120 1 539 1.1E-211 T 22-04-2016 YPTB_RS12270 bd07bb39ef760770daa4e45c65b1cd1a 103 PANTHER PTHR38008:SF1 1 101 3.1E-60 T 22-04-2016 YPTB_RS12270 bd07bb39ef760770daa4e45c65b1cd1a 103 Pfam PF03891 Domain of unknown function (DUF333) 52 99 9.7E-21 T 22-04-2016 IPR005590 Protein of unknown function DUF333 YPTB_RS12270 bd07bb39ef760770daa4e45c65b1cd1a 103 PANTHER PTHR38008 1 101 3.1E-60 T 22-04-2016 YPTB_RS11160 d9127c7bc0b025da09273cab88753656 271 SUPERFAMILY SSF117396 2 251 1.83E-65 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YPTB_RS11160 d9127c7bc0b025da09273cab88753656 271 Pfam PF01904 Protein of unknown function DUF72 20 248 7.7E-51 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YPTB_RS11160 d9127c7bc0b025da09273cab88753656 271 Gene3D G3DSA:3.20.20.410 2 261 1.4E-68 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YPTB_RS11160 d9127c7bc0b025da09273cab88753656 271 PANTHER PTHR30348 1 268 2.1E-94 T 22-04-2016 YPTB_RS11160 d9127c7bc0b025da09273cab88753656 271 PANTHER PTHR30348:SF3 1 268 2.1E-94 T 22-04-2016 YPTB_RS03610 bcab395e1dd4e9cd70c4ba8ee20d2b52 147 PANTHER PTHR38595 1 147 2.7E-83 T 22-04-2016 YPTB_RS03610 bcab395e1dd4e9cd70c4ba8ee20d2b52 147 PANTHER PTHR38595:SF1 1 147 2.7E-83 T 22-04-2016 YPTB_RS03610 bcab395e1dd4e9cd70c4ba8ee20d2b52 147 Pfam PF04965 Gene 25-like lysozyme 25 121 1.7E-12 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPTB_RS09580 ebba6642f7f624fe87cc06aff5412487 161 Pfam PF06995 Phage P2 GpU 6 125 3.5E-42 T 22-04-2016 IPR009734 Myoviridae, GpU YPTB_RS09580 ebba6642f7f624fe87cc06aff5412487 161 PIRSF PIRSF029208 1 153 7.3E-58 T 22-04-2016 IPR016912 Bacteriophage P2, GpU YPTB_RS03620 5185f8463fe407e4652ed29c9b8be55a 327 PANTHER PTHR35564 1 326 1.3E-143 T 22-04-2016 YPTB_RS03620 5185f8463fe407e4652ed29c9b8be55a 327 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 312 1.1E-52 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS03620 5185f8463fe407e4652ed29c9b8be55a 327 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 19 312 4.7E-59 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS03620 5185f8463fe407e4652ed29c9b8be55a 327 PANTHER PTHR35564:SF2 1 326 1.3E-143 T 22-04-2016 YPTB_RS21165 8427f806598536207bf4a15c9a7a43be 184 PANTHER PTHR37941 1 183 6.8E-56 T 22-04-2016 YPTB_RS21165 8427f806598536207bf4a15c9a7a43be 184 SUPERFAMILY SSF158668 6 170 2.22E-58 T 22-04-2016 YPTB_RS21165 8427f806598536207bf4a15c9a7a43be 184 Gene3D G3DSA:1.20.120.330 2 171 6.8E-79 T 22-04-2016 YPTB_RS21165 8427f806598536207bf4a15c9a7a43be 184 Pfam PF05068 Mannitol repressor 9 170 1.0E-63 T 22-04-2016 IPR007761 Mannitol repressor YPTB_RS11615 7bd7da05052cb8fde01c837fcdaa7e3e 104 PANTHER PTHR34606 1 104 1.1E-67 T 22-04-2016 YPTB_RS11615 7bd7da05052cb8fde01c837fcdaa7e3e 104 SMART SM00749 42 104 6.4E-8 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPTB_RS11615 7bd7da05052cb8fde01c837fcdaa7e3e 104 PANTHER PTHR34606:SF1 1 104 1.1E-67 T 22-04-2016 YPTB_RS11615 7bd7da05052cb8fde01c837fcdaa7e3e 104 Pfam PF04972 BON domain 37 103 4.0E-21 T 22-04-2016 IPR007055 BON domain YPTB_RS09275 8f9ccfa801a6edf67356b4f9ef714124 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 324 1.0E-25 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS09275 8f9ccfa801a6edf67356b4f9ef714124 352 PANTHER PTHR32196 10 349 1.4E-189 T 22-04-2016 YPTB_RS09275 8f9ccfa801a6edf67356b4f9ef714124 352 PANTHER PTHR32196:SF39 10 349 1.4E-189 T 22-04-2016 YPTB_RS11095 3064cf68c32a45a94dde160a991419fd 401 SUPERFAMILY SSF103473 14 392 7.19E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS11095 3064cf68c32a45a94dde160a991419fd 401 PANTHER PTHR23517:SF2 1 401 3.4E-201 T 22-04-2016 YPTB_RS11095 3064cf68c32a45a94dde160a991419fd 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.633 T 22-04-2016 IPR022855 Multidrug resistance protein MdtH YPTB_RS11095 3064cf68c32a45a94dde160a991419fd 401 Pfam PF07690 Major Facilitator Superfamily 20 234 3.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS11095 3064cf68c32a45a94dde160a991419fd 401 Gene3D G3DSA:1.20.1250.20 19 187 4.9E-26 T 22-04-2016 YPTB_RS11095 3064cf68c32a45a94dde160a991419fd 401 Gene3D G3DSA:1.20.1250.20 199 387 1.4E-17 T 22-04-2016 YPTB_RS11095 3064cf68c32a45a94dde160a991419fd 401 PANTHER PTHR23517 1 401 3.4E-201 T 22-04-2016 YPTB_RS17815 32ae34b479741d840e4239c22cd85d00 257 PANTHER PTHR11487 1 248 3.4E-112 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 YPTB_RS17815 32ae34b479741d840e4239c22cd85d00 257 Pfam PF00975 Thioesterase domain 16 237 2.4E-44 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPTB_RS17815 32ae34b479741d840e4239c22cd85d00 257 Gene3D G3DSA:3.40.50.1820 174 239 1.3E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17815 32ae34b479741d840e4239c22cd85d00 257 Gene3D G3DSA:3.40.50.1820 10 120 1.3E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS17815 32ae34b479741d840e4239c22cd85d00 257 PANTHER PTHR11487:SF3 1 248 3.4E-112 T 22-04-2016 YPTB_RS17815 32ae34b479741d840e4239c22cd85d00 257 SUPERFAMILY SSF53474 8 236 2.91E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS16885 8648d78151eecbc4f1daf9c9feff25de 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 54 1.8E-18 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) YPTB_RS16885 8648d78151eecbc4f1daf9c9feff25de 66 PANTHER PTHR36154 1 66 5.3E-20 T 22-04-2016 YPTB_RS16885 8648d78151eecbc4f1daf9c9feff25de 66 SUPERFAMILY SSF46955 6 63 3.66E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 SUPERFAMILY SSF50331 239 326 2.15E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 PANTHER PTHR24220:SF123 4 281 9.4E-142 T 22-04-2016 YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 SUPERFAMILY SSF52540 3 244 1.16E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 Gene3D G3DSA:3.40.50.300 3 244 2.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 Pfam PF00005 ABC transporter 18 164 8.0E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.8E-125 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 SMART SM00382 27 214 1.3E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPTB_RS14810 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 PANTHER PTHR24220 4 281 9.4E-142 T 22-04-2016 YPTB_RS09755 188463c584ca846544838e65c2e774b4 292 Pfam PF14491 Protein of unknown function (DUF4435) 29 252 5.9E-23 T 22-04-2016 IPR029492 Domain of unknown function DUF4435 YPTB_RS20005 ca36d1e45dec6dd380e0b0a233ad91d0 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site YPTB_RS20005 ca36d1e45dec6dd380e0b0a233ad91d0 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.063 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20005 ca36d1e45dec6dd380e0b0a233ad91d0 100 Gene3D G3DSA:3.30.70.330 6 98 4.2E-35 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 YPTB_RS20005 ca36d1e45dec6dd380e0b0a233ad91d0 100 PANTHER PTHR11620 9 95 1.6E-34 T 22-04-2016 YPTB_RS20005 ca36d1e45dec6dd380e0b0a233ad91d0 100 Pfam PF00276 Ribosomal protein L23 9 95 4.1E-32 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YPTB_RS20005 ca36d1e45dec6dd380e0b0a233ad91d0 100 SUPERFAMILY SSF54189 3 92 5.76E-31 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS05760 b8794ba45f25d6a802b8512c8b2fed9f 309 Pfam PF01148 Cytidylyltransferase family 43 307 2.8E-63 T 22-04-2016 YPTB_RS05760 b8794ba45f25d6a802b8512c8b2fed9f 309 PANTHER PTHR13773:SF11 30 309 3.4E-156 T 22-04-2016 YPTB_RS05760 b8794ba45f25d6a802b8512c8b2fed9f 309 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 265 291 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 YPTB_RS05760 b8794ba45f25d6a802b8512c8b2fed9f 309 PANTHER PTHR13773 30 309 3.4E-156 T 22-04-2016 YPTB_RS08135 efacffae32df6accc988a0b4cd4cb833 412 SUPERFAMILY SSF53901 4 170 5.21E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08135 efacffae32df6accc988a0b4cd4cb833 412 SUPERFAMILY SSF53901 174 411 4.4E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08135 efacffae32df6accc988a0b4cd4cb833 412 PANTHER PTHR11877 4 411 3.1E-101 T 22-04-2016 YPTB_RS08135 efacffae32df6accc988a0b4cd4cb833 412 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 267 408 1.0E-15 T 22-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 YPTB_RS08135 efacffae32df6accc988a0b4cd4cb833 412 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 3 168 1.8E-7 T 22-04-2016 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: REACT_22258 YPTB_RS08135 efacffae32df6accc988a0b4cd4cb833 412 Gene3D G3DSA:3.40.47.10 3 255 1.4E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPTB_RS08135 efacffae32df6accc988a0b4cd4cb833 412 PANTHER PTHR11877:SF26 4 411 3.1E-101 T 22-04-2016 YPTB_RS10250 0b013694894235dd9653e593526f0bdd 851 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 192 567 4.3E-131 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 YPTB_RS20985 054cdbd519ce311e61cc8ea63312dc9c 82 SUPERFAMILY SSF53098 1 56 2.43E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS20985 054cdbd519ce311e61cc8ea63312dc9c 82 PANTHER PTHR35404 1 80 3.2E-65 T 22-04-2016 YPTB_RS20985 054cdbd519ce311e61cc8ea63312dc9c 82 PANTHER PTHR35404:SF2 1 80 3.2E-65 T 22-04-2016 YPTB_RS03515 45361528ba9df4b10b21744dd6d2aa73 204 PANTHER PTHR30086 1 203 2.1E-144 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS03515 45361528ba9df4b10b21744dd6d2aa73 204 PIRSF PIRSF006324 1 204 2.3E-57 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS03515 45361528ba9df4b10b21744dd6d2aa73 204 PANTHER PTHR30086:SF8 1 203 2.1E-144 T 22-04-2016 YPTB_RS03515 45361528ba9df4b10b21744dd6d2aa73 204 Pfam PF01810 LysE type translocator 15 203 1.1E-37 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS02545 86628b9bb7eb05988500d41284089bde 151 Pfam PF12582 Protein of unknown function (DUF3757) 20 142 3.3E-35 T 22-04-2016 IPR022231 Protein of unknown function DUF3757 YPTB_RS01065 fbdc0c898ccef9005ed90f3e67dc9829 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 68.149 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 YPTB_RS01065 fbdc0c898ccef9005ed90f3e67dc9829 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 1.6E-180 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 YPTB_RS12675 52f0f05efb4bba759914e4a970d05ff5 114 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 114 31.696 T 22-04-2016 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE UniPathway: UPA00030 YPTB_RS12675 52f0f05efb4bba759914e4a970d05ff5 114 SUPERFAMILY SSF103481 35 113 3.92E-14 T 22-04-2016 YPTB_RS12675 52f0f05efb4bba759914e4a970d05ff5 114 PANTHER PTHR30561:SF9 1 113 3.3E-50 T 22-04-2016 YPTB_RS12675 52f0f05efb4bba759914e4a970d05ff5 114 PANTHER PTHR30561 1 113 3.3E-50 T 22-04-2016 YPTB_RS12675 52f0f05efb4bba759914e4a970d05ff5 114 Pfam PF00892 EamA-like transporter family 33 111 4.5E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS18280 025f3fe9c549568ea7c13179a08c1ee6 237 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 201 2.1E-35 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPTB_RS18280 025f3fe9c549568ea7c13179a08c1ee6 237 PANTHER PTHR30572 1 219 4.2E-86 T 22-04-2016 YPTB_RS18280 025f3fe9c549568ea7c13179a08c1ee6 237 PANTHER PTHR30572:SF11 1 219 4.2E-86 T 22-04-2016 YPTB_RS18280 025f3fe9c549568ea7c13179a08c1ee6 237 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 4 215 3.7E-97 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 YPTB_RS04150 ab1f8dae3ccaf204036cd9bd633f66cf 204 PANTHER PTHR30506 1 204 4.5E-98 T 22-04-2016 YPTB_RS04150 ab1f8dae3ccaf204036cd9bd633f66cf 204 PANTHER PTHR30506:SF3 1 204 4.5E-98 T 22-04-2016 YPTB_RS04150 ab1f8dae3ccaf204036cd9bd633f66cf 204 Pfam PF03458 UPF0126 domain 92 161 1.2E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPTB_RS04150 ab1f8dae3ccaf204036cd9bd633f66cf 204 Pfam PF03458 UPF0126 domain 4 78 1.3E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPTB_RS09635 7085a4a9dcf853b3bbd11721d3ce49c5 213 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 12 211 4.3E-62 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 YPTB_RS09635 7085a4a9dcf853b3bbd11721d3ce49c5 213 Pfam PF04717 Type VI secretion system, phage-baseplate injector 9 119 4.4E-44 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS06080 1ebea9e2c51dafa0db5bda58d20550aa 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 2.3E-54 T 22-04-2016 IPR009912 Zinc-ribbon containing domain YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 241 8.5E-25 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 22-04-2016 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 4.7E-59 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 Gene3D G3DSA:3.60.110.10 4 242 1.8E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 SUPERFAMILY SSF52402 251 520 1.01E-77 T 22-04-2016 YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 SUPERFAMILY SSF56317 4 242 1.44E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 PANTHER PTHR23090 2 535 4.3E-202 T 22-04-2016 YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 Pfam PF02540 NAD synthase 264 511 1.5E-71 T 22-04-2016 IPR022310 NAD/GMP synthase YPTB_RS15535 2aa3697cf11ea100909d45c09668a297 540 Gene3D G3DSA:3.40.50.620 258 518 2.3E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS13825 1943185fbda7494b50a540868fa2e8ec 375 SUPERFAMILY SSF48452 71 167 3.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS13825 1943185fbda7494b50a540868fa2e8ec 375 Gene3D G3DSA:1.25.40.10 85 168 4.4E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPTB_RS13825 1943185fbda7494b50a540868fa2e8ec 375 PANTHER PTHR30336:SF3 82 375 1.1E-194 T 22-04-2016 YPTB_RS13825 1943185fbda7494b50a540868fa2e8ec 375 Gene3D G3DSA:3.40.50.620 200 318 4.2E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS13825 1943185fbda7494b50a540868fa2e8ec 375 PANTHER PTHR30336 82 375 1.1E-194 T 22-04-2016 YPTB_RS13825 1943185fbda7494b50a540868fa2e8ec 375 Pfam PF02698 DUF218 domain 204 320 9.8E-22 T 22-04-2016 IPR003848 Domain of unknown function DUF218 YPTB_RS12290 c052dbf30477cd00e5867fc31ecd448f 313 PIRSF PIRSF004976 2 270 7.4E-76 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 YPTB_RS12290 c052dbf30477cd00e5867fc31ecd448f 313 Gene3D G3DSA:3.40.50.620 23 206 4.4E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB_RS12290 c052dbf30477cd00e5867fc31ecd448f 313 SUPERFAMILY SSF52402 17 236 5.07E-54 T 22-04-2016 YPTB_RS12290 c052dbf30477cd00e5867fc31ecd448f 313 PANTHER PTHR11807:SF16 9 288 5.2E-124 T 22-04-2016 YPTB_RS12290 c052dbf30477cd00e5867fc31ecd448f 313 PANTHER PTHR11807 9 288 5.2E-124 T 22-04-2016 YPTB_RS12290 c052dbf30477cd00e5867fc31ecd448f 313 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.223 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 YPTB_RS12290 c052dbf30477cd00e5867fc31ecd448f 313 Pfam PF01171 PP-loop family 42 203 1.5E-12 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 Gene3D G3DSA:2.40.180.10 3 358 3.3E-174 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 SUPERFAMILY SSF56634 4 479 7.59E-211 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 Pfam PF00199 Catalase 9 389 2.5E-187 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PANTHER PTHR11465 8 479 4.9E-298 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PIRSF PIRSF038928 1 480 6.3E-220 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 Pfam PF06628 Catalase-related immune-responsive 417 477 1.6E-21 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 322 348 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 125 143 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 106 123 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 85 103 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 290 317 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 22 45 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS06890 12014d6c027a795cb412c4cb2c5f9a98 480 SMART SM01060 9 393 4.3E-281 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 SUPERFAMILY SSF47413 7 62 2.69E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 Pfam PF13377 Periplasmic binding protein-like domain 174 334 1.4E-32 T 22-04-2016 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 Gene3D G3DSA:1.10.260.40 7 67 1.6E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 PANTHER PTHR30146 6 339 3.6E-110 T 22-04-2016 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 Gene3D G3DSA:3.40.50.2300 173 334 3.0E-50 T 22-04-2016 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 SMART SM00354 6 75 1.2E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 PANTHER PTHR30146:SF4 6 339 3.6E-110 T 22-04-2016 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 SUPERFAMILY SSF53822 66 335 1.07E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 5.5E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPTB_RS17700 363dc9b64b2baafb408c1ea9ef5284f4 339 Gene3D G3DSA:3.40.50.2300 68 172 2.0E-15 T 22-04-2016 YPTB_RS16605 2170d9d6295084b351d8be90c0133060 138 Gene3D G3DSA:1.10.10.10 30 120 7.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16605 2170d9d6295084b351d8be90c0133060 138 SUPERFAMILY SSF46894 43 118 9.35E-6 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPTB_RS14690 493782b88072ae7631215c6358166baf 201 Pfam PF06042 Nucleotidyltransferase 23 199 5.2E-67 T 22-04-2016 IPR009267 Putative nucleotidyltransferase YPTB_RS14690 493782b88072ae7631215c6358166baf 201 PANTHER PTHR39166 1 81 8.8E-70 T 22-04-2016 YPTB_RS14690 493782b88072ae7631215c6358166baf 201 PANTHER PTHR39166 101 201 8.8E-70 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 Gene3D G3DSA:2.40.50.100 51 84 4.5E-16 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 Gene3D G3DSA:2.40.50.100 211 244 4.5E-16 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 PANTHER PTHR30367:SF1 11 347 8.1E-100 T 22-04-2016 IPR030196 Multidrug resistance protein MdtN GO:0006855 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 Pfam PF13533 Biotin-lipoyl like 51 99 6.8E-14 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 Pfam PF13437 HlyD family secretion protein 214 329 5.4E-10 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 PANTHER PTHR30367 11 347 8.1E-100 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 SUPERFAMILY SSF111369 125 158 1.05E-8 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 SUPERFAMILY SSF111369 190 263 1.05E-8 T 22-04-2016 YPTB_RS18595 1424e6a94d318c96b37551f1721fa90a 349 SUPERFAMILY SSF111369 50 111 6.15E-10 T 22-04-2016 YPTB_RS01220 7b672f7ea603d7b2880a6060eeb6257b 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 7.7E-60 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 YPTB_RS01220 7b672f7ea603d7b2880a6060eeb6257b 206 PANTHER PTHR30086 1 206 7.5E-144 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS01220 7b672f7ea603d7b2880a6060eeb6257b 206 Pfam PF01810 LysE type translocator 14 205 1.2E-50 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPTB_RS01220 7b672f7ea603d7b2880a6060eeb6257b 206 PANTHER PTHR30086:SF1 1 206 7.5E-144 T 22-04-2016 YPTB_RS00340 05af4319c94097504f8cddb53d47f552 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00340 05af4319c94097504f8cddb53d47f552 55 Pfam PF00471 Ribosomal protein L33 7 53 7.0E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00340 05af4319c94097504f8cddb53d47f552 55 PANTHER PTHR15238 1 55 4.7E-26 T 22-04-2016 YPTB_RS00340 05af4319c94097504f8cddb53d47f552 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.908 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS00340 05af4319c94097504f8cddb53d47f552 55 SUPERFAMILY SSF57829 1 53 2.87E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YPTB_RS00340 05af4319c94097504f8cddb53d47f552 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.3E-27 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPTB_RS18655 a21121af42ddc44f7be25e307caf925a 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 115 266 8.2E-6 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative YPTB_RS14770 7c2c3685c6f5d243ab0ccb01dc83d91d 65 PANTHER PTHR40034:SF1 1 65 1.3E-20 T 22-04-2016 YPTB_RS14770 7c2c3685c6f5d243ab0ccb01dc83d91d 65 Pfam PF11755 Protein of unknown function (DUF3311) 7 64 2.5E-17 T 22-04-2016 IPR021741 Protein of unknown function DUF3311 YPTB_RS14770 7c2c3685c6f5d243ab0ccb01dc83d91d 65 PANTHER PTHR40034 1 65 1.3E-20 T 22-04-2016 YPTB_RS14880 7c0a799586661845d41f86f6a7d1ede5 137 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 136 3.3E-40 T 22-04-2016 IPR016052 Bacteriophage 933W, L0136 YPTB_RS14880 7c0a799586661845d41f86f6a7d1ede5 137 Pfam PF04076 Bacterial OB fold (BOF) protein 30 135 2.0E-35 T 22-04-2016 IPR005220 Bacterial OB-fold YPTB_RS14880 7c0a799586661845d41f86f6a7d1ede5 137 SUPERFAMILY SSF101756 40 135 1.96E-35 T 22-04-2016 IPR005220 Bacterial OB-fold YPTB_RS14880 7c0a799586661845d41f86f6a7d1ede5 137 Gene3D G3DSA:2.40.50.200 38 137 2.4E-42 T 22-04-2016 IPR005220 Bacterial OB-fold YPTB_RS14880 7c0a799586661845d41f86f6a7d1ede5 137 PANTHER PTHR36571:SF1 2 137 6.1E-75 T 22-04-2016 YPTB_RS14880 7c0a799586661845d41f86f6a7d1ede5 137 PANTHER PTHR36571 2 137 6.1E-75 T 22-04-2016 YPTB_RS18500 47d7f9b6a4984b6a8dccf9526c337498 156 Gene3D G3DSA:3.40.1580.10 46 144 3.9E-5 T 22-04-2016 IPR018958 SMI1/KNR4-like domain YPTB_RS18500 47d7f9b6a4984b6a8dccf9526c337498 156 SUPERFAMILY SSF160631 49 148 3.73E-7 T 22-04-2016 YPTB_RS20830 0ad4a974b1d38605c04e59439323cb92 123 SUPERFAMILY SSF53686 26 121 6.68E-27 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS20830 0ad4a974b1d38605c04e59439323cb92 123 PANTHER PTHR10314 24 123 1.4E-38 T 22-04-2016 YPTB_RS20830 0ad4a974b1d38605c04e59439323cb92 123 Gene3D G3DSA:3.40.50.1100 26 63 1.7E-9 T 22-04-2016 YPTB_RS20830 0ad4a974b1d38605c04e59439323cb92 123 PANTHER PTHR10314:SF8 24 123 1.4E-38 T 22-04-2016 YPTB_RS20830 0ad4a974b1d38605c04e59439323cb92 123 Gene3D G3DSA:3.40.50.1100 64 121 7.7E-20 T 22-04-2016 YPTB_RS20830 0ad4a974b1d38605c04e59439323cb92 123 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 121 2.7E-25 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB_RS16405 65a45e1b8a4158650227a9878b8fda64 156 Pfam PF10713 Protein of unknown function (DUF2509) 18 154 1.2E-42 T 22-04-2016 IPR019652 Protein of unknown function DUF2509 YPTB_RS08510 8c245a4c372394bffe6cde83f520d993 359 Pfam PF01497 Periplasmic binding protein 72 311 4.1E-21 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPTB_RS08510 8c245a4c372394bffe6cde83f520d993 359 PANTHER PTHR30532 13 353 1.1E-143 T 22-04-2016 YPTB_RS08510 8c245a4c372394bffe6cde83f520d993 359 Gene3D G3DSA:3.40.50.1980 68 186 5.5E-24 T 22-04-2016 YPTB_RS08510 8c245a4c372394bffe6cde83f520d993 359 PANTHER PTHR30532:SF7 13 353 1.1E-143 T 22-04-2016 YPTB_RS08510 8c245a4c372394bffe6cde83f520d993 359 Gene3D G3DSA:3.40.50.1980 187 344 2.6E-15 T 22-04-2016 YPTB_RS08510 8c245a4c372394bffe6cde83f520d993 359 SUPERFAMILY SSF53807 61 342 5.1E-47 T 22-04-2016 YPTB_RS19230 65dd4bd61e55a0b45782f0ed15014538 133 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 60 127 1.4E-17 T 22-04-2016 YPTB_RS19230 65dd4bd61e55a0b45782f0ed15014538 133 Gene3D G3DSA:3.30.1380.10 10 90 5.9E-5 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS19230 65dd4bd61e55a0b45782f0ed15014538 133 SUPERFAMILY SSF55166 3 129 9.42E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS02940 60f4ccaef790df74807f44f49d430e34 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 157 6.1E-54 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YPTB_RS02940 60f4ccaef790df74807f44f49d430e34 158 Pfam PF06754 Phosphonate metabolism protein PhnG 7 156 1.8E-51 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YPTB_RS10110 92b4ce01724aaa4f72f9c7c0d126b900 154 Pfam PF06995 Phage P2 GpU 6 125 4.6E-44 T 22-04-2016 IPR009734 Myoviridae, GpU YPTB_RS10110 92b4ce01724aaa4f72f9c7c0d126b900 154 PIRSF PIRSF029208 1 150 4.0E-60 T 22-04-2016 IPR016912 Bacteriophage P2, GpU YPTB_RS08930 06be050030ade4d14f88e674e8c99b61 99 Pfam PF10765 Protein of unknown function (DUF2591) 29 97 5.1E-14 T 22-04-2016 IPR019701 Bacteriophage P22, NinX YPTB_RS10210 0e0a5a0c8db67de2a12188776d34f58d 163 Pfam PF05926 Phage head completion protein (GPL) 25 163 2.5E-48 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 YPTB_RS02550 595794c186337972b3cc7ca01042129e 246 Pfam PF04225 Opacity-associated protein A LysM-like domain 161 245 3.7E-38 T 22-04-2016 IPR007340 Opacity-associated protein A YPTB_RS02550 595794c186337972b3cc7ca01042129e 246 Pfam PF08525 Opacity-associated protein A N-terminal motif 89 115 5.3E-7 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal YPTB_RS06760 5534780c015cc6efd68a642d6e5890b0 113 Pfam PF01844 HNH endonuclease 27 75 8.2E-10 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 YPTB_RS06760 5534780c015cc6efd68a642d6e5890b0 113 SMART SM00507 15 70 3.0E-4 T 22-04-2016 IPR003615 HNH nuclease YPTB_RS06180 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.10410 83 173 8.4E-32 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain YPTB_RS06180 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.1000 174 247 2.0E-41 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS06180 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.1000 1 79 2.0E-41 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS06180 5617475800bc71c40f24777581194307 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.3E-23 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPTB_RS06180 5617475800bc71c40f24777581194307 250 PANTHER PTHR19288 3 247 6.1E-168 T 22-04-2016 YPTB_RS06180 5617475800bc71c40f24777581194307 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.8E-20 T 22-04-2016 YPTB_RS06180 5617475800bc71c40f24777581194307 250 SUPERFAMILY SSF56784 1 247 6.67E-64 T 22-04-2016 IPR023214 HAD-like domain YPTB_RS06180 5617475800bc71c40f24777581194307 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 4.6E-63 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPTB_RS06180 5617475800bc71c40f24777581194307 250 PANTHER PTHR19288:SF40 3 247 6.1E-168 T 22-04-2016 YPTB_RS13545 1c700708daa3567e6bbdb0f91a542132 77 Pfam PF07119 Protein of unknown function (DUF1375) 12 43 7.8E-5 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 YPTB_RS11970 3bf5c832a71c6623393128a38a49bb2b 81 Pfam PF06649 Protein of unknown function (DUF1161) 23 76 4.2E-27 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 YPTB_RS11970 3bf5c832a71c6623393128a38a49bb2b 81 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 76 4.0E-17 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 YPTB_RS17290 99950193b776db97360dfbbb5fb7601a 259 PANTHER PTHR34387 6 246 1.6E-66 T 22-04-2016 YPTB_RS17290 99950193b776db97360dfbbb5fb7601a 259 Pfam PF04402 Protein of unknown function (DUF541) 36 237 1.1E-44 T 22-04-2016 IPR007497 Protein of unknown function DUF541 YPTB_RS17290 99950193b776db97360dfbbb5fb7601a 259 PANTHER PTHR34387:SF1 6 246 1.6E-66 T 22-04-2016 YPTB_RS21235 2fb207201f373a712e8d40a0ad42029f 154 Pfam PF01526 Tn3 transposase DDE domain 1 129 9.7E-46 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 YPTB_RS17390 628af073ee1e0d677594a5767701e871 294 PANTHER PTHR23088 1 288 2.4E-156 T 22-04-2016 YPTB_RS17390 628af073ee1e0d677594a5767701e871 294 SUPERFAMILY SSF56317 1 285 1.7E-81 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS17390 628af073ee1e0d677594a5767701e871 294 PANTHER PTHR23088:SF11 1 288 2.4E-156 T 22-04-2016 YPTB_RS17390 628af073ee1e0d677594a5767701e871 294 Pfam PF00795 Carbon-nitrogen hydrolase 5 268 3.3E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS17390 628af073ee1e0d677594a5767701e871 294 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 285 3.1E-146 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 YPTB_RS17390 628af073ee1e0d677594a5767701e871 294 Gene3D G3DSA:3.60.110.10 1 285 4.7E-94 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPTB_RS09690 34354eaa7ca583bbd2271131440c2767 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 2.3E-23 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 YPTB_RS09690 34354eaa7ca583bbd2271131440c2767 590 Pfam PF03237 Terminase-like family 162 571 4.7E-104 T 22-04-2016 IPR004921 Terminase, large subunit YPTB_RS09460 c4ce22edc12fb411d74c63a19e90455c 123 Gene3D G3DSA:1.10.10.10 57 113 1.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS09460 c4ce22edc12fb411d74c63a19e90455c 123 SUPERFAMILY SSF46785 49 101 8.86E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS16225 8f521cc7fc202f7654721bdbba91e2a0 282 PANTHER PTHR13773 2 279 2.0E-98 T 22-04-2016 YPTB_RS16225 8f521cc7fc202f7654721bdbba91e2a0 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 YPTB_RS16225 8f521cc7fc202f7654721bdbba91e2a0 282 Pfam PF01148 Cytidylyltransferase family 4 279 3.7E-71 T 22-04-2016 YPTB_RS04620 f196abcf943032a8dfa2bd4434bb96d8 263 PANTHER PTHR38034 2 263 1.7E-107 T 22-04-2016 YPTB_RS04620 f196abcf943032a8dfa2bd4434bb96d8 263 Pfam PF01578 Cytochrome C assembly protein 37 261 6.9E-42 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YPTB_RS16920 a5889521d781db1022dbc1a5d4555cc1 86 SUPERFAMILY SSF143011 1 81 4.05E-16 T 22-04-2016 YPTB_RS16920 a5889521d781db1022dbc1a5d4555cc1 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 72 1.3E-6 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YPTB_RS16920 a5889521d781db1022dbc1a5d4555cc1 86 PANTHER PTHR38813:SF3 1 86 1.1E-70 T 22-04-2016 YPTB_RS16920 a5889521d781db1022dbc1a5d4555cc1 86 PANTHER PTHR38813 1 86 1.1E-70 T 22-04-2016 YPTB_RS10215 c8d5f9749fd37dd4934f56151df3c17f 217 Pfam PF05944 Phage small terminase subunit 36 164 1.2E-46 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 YPTB_RS10050 66f1e5d0e26ecfd173aa5a56a4614e98 368 Pfam PF09327 Domain of unknown function (DUF1983) 199 267 9.6E-8 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 YPTB_RS10050 66f1e5d0e26ecfd173aa5a56a4614e98 368 Gene3D G3DSA:2.60.40.10 73 158 5.5E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS01885 f59a9363c77ee2d70457088c23baee9f 82 TIGRFAM TIGR02498 type_III_ssaH: type III secretion system protein, SsaH family 4 82 4.5E-37 T 22-04-2016 IPR010437 Type III secretion system SsaH YPTB_RS01885 f59a9363c77ee2d70457088c23baee9f 82 Pfam PF06287 Protein of unknown function (DUF1039) 17 81 5.8E-30 T 22-04-2016 IPR010437 Type III secretion system SsaH YPTB_RS17955 593f6aecc9656a6ec3c0a2466ae84fbc 288 PANTHER PTHR30433 1 280 2.2E-98 T 22-04-2016 YPTB_RS17955 593f6aecc9656a6ec3c0a2466ae84fbc 288 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site YPTB_RS17955 593f6aecc9656a6ec3c0a2466ae84fbc 288 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 236 1.7E-11 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPTB_RS17955 593f6aecc9656a6ec3c0a2466ae84fbc 288 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 9.8E-113 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPTB_RS17955 593f6aecc9656a6ec3c0a2466ae84fbc 288 PANTHER PTHR30433:SF4 1 280 2.2E-98 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPTB_RS10585 21c1769b82c2152eafad7ba18dfeb100 157 SUPERFAMILY SSF49478 39 88 4.71E-7 T 22-04-2016 YPTB_RS10585 21c1769b82c2152eafad7ba18dfeb100 157 Gene3D G3DSA:2.60.40.10 37 83 2.1E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.394 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.9E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 Gene3D G3DSA:3.40.50.9100 5 147 5.1E-67 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 PIRSF PIRSF001399 3 149 4.7E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 SUPERFAMILY SSF52304 6 148 1.1E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 Pfam PF01220 Dehydroquinase class II 7 142 4.4E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 2.0E-71 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS19305 1c143fe2d9eb4b7125ff233bac97f673 150 PANTHER PTHR21272 2 150 3.7E-90 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPTB_RS02820 15c0e4db20093ab3bb5ffcacc310d107 292 PANTHER PTHR30217:SF8 1 292 3.5E-221 T 22-04-2016 YPTB_RS02820 15c0e4db20093ab3bb5ffcacc310d107 292 Pfam PF01136 Peptidase family U32 92 209 1.3E-11 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPTB_RS02820 15c0e4db20093ab3bb5ffcacc310d107 292 PANTHER PTHR30217 1 292 3.5E-221 T 22-04-2016 YPTB_RS09685 c8e3261b5b576ab844d599d2960fd9fb 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 284 1.1E-111 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 YPTB_RS08965 a50ed98301dbf0fb74fe88fb331921ae 251 PANTHER PTHR30616 23 191 1.0E-60 T 22-04-2016 YPTB_RS08965 a50ed98301dbf0fb74fe88fb331921ae 251 Gene3D G3DSA:3.60.140.10 40 193 1.2E-50 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPTB_RS08965 a50ed98301dbf0fb74fe88fb331921ae 251 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 38 193 5.7E-42 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPTB_RS08965 a50ed98301dbf0fb74fe88fb331921ae 251 SUPERFAMILY SSF64438 20 193 1.72E-47 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPTB_RS08965 a50ed98301dbf0fb74fe88fb331921ae 251 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 192 1.4E-45 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPTB_RS01870 404b90692f1b76f9b2321b1c7990a2f4 73 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 4 69 3.1E-24 T 22-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 YPTB_RS01870 404b90692f1b76f9b2321b1c7990a2f4 73 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 4 70 5.1E-25 T 22-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 YPTB_RS11530 61c44d81695c7b98986ff20cb1ed079a 306 PANTHER PTHR30465 1 306 1.2E-164 T 22-04-2016 YPTB_RS11530 61c44d81695c7b98986ff20cb1ed079a 306 Gene3D G3DSA:1.10.3720.10 89 302 1.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11530 61c44d81695c7b98986ff20cb1ed079a 306 PANTHER PTHR30465:SF74 1 306 1.2E-164 T 22-04-2016 YPTB_RS11530 61c44d81695c7b98986ff20cb1ed079a 306 SUPERFAMILY SSF161098 91 291 2.94E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11530 61c44d81695c7b98986ff20cb1ed079a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.8E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS01405 49692bdb3d9cf00bcd2fa2366036c9c4 439 PANTHER PTHR30061:SF7 11 439 1.8E-175 T 22-04-2016 YPTB_RS01405 49692bdb3d9cf00bcd2fa2366036c9c4 439 PANTHER PTHR30061 11 439 1.8E-175 T 22-04-2016 YPTB_RS01405 49692bdb3d9cf00bcd2fa2366036c9c4 439 SUPERFAMILY SSF53850 27 426 1.35E-73 T 22-04-2016 YPTB_RS01405 49692bdb3d9cf00bcd2fa2366036c9c4 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 359 1.8E-40 T 22-04-2016 YPTB_RS01405 49692bdb3d9cf00bcd2fa2366036c9c4 439 Gene3D G3DSA:3.40.190.10 147 347 8.5E-39 T 22-04-2016 YPTB_RS01405 49692bdb3d9cf00bcd2fa2366036c9c4 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YPTB_RS01140 3c91712e96accd42f37ff2a0b61dd3ce 379 Pfam PF00805 Pentapeptide repeats (8 copies) 77 111 2.1E-6 T 22-04-2016 IPR001646 Pentapeptide repeat YPTB_RS01140 3c91712e96accd42f37ff2a0b61dd3ce 379 SUPERFAMILY SSF141571 70 134 1.7E-12 T 22-04-2016 YPTB_RS15895 470fdcf8ea9aac04a9a47724b04c7142 321 PANTHER PTHR33643 2 319 7.8E-85 T 22-04-2016 YPTB_RS15895 470fdcf8ea9aac04a9a47724b04c7142 321 PANTHER PTHR33643:SF1 2 319 7.8E-85 T 22-04-2016 YPTB_RS15895 470fdcf8ea9aac04a9a47724b04c7142 321 Hamap MF_01384 Urease accessory protein UreD [ureD]. 44 306 22.994 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 YPTB_RS15895 470fdcf8ea9aac04a9a47724b04c7142 321 Pfam PF01774 UreD urease accessory protein 88 295 6.0E-40 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 YPTB_RS08490 502391689ee6125a88ef2c581d14cb75 614 PANTHER PTHR34384:SF5 16 613 0.0 T 22-04-2016 YPTB_RS08490 502391689ee6125a88ef2c581d14cb75 614 Pfam PF06276 Ferric iron reductase FhuF-like transporter 429 586 5.0E-41 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPTB_RS08490 502391689ee6125a88ef2c581d14cb75 614 Pfam PF04183 IucA / IucC family 159 408 1.3E-76 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 YPTB_RS08490 502391689ee6125a88ef2c581d14cb75 614 PANTHER PTHR34384 16 613 0.0 T 22-04-2016 YPTB_RS01245 ab6eeea0e1971aa4817a823fc5ae39ae 371 PANTHER PTHR23344:SF7 12 371 2.9E-121 T 22-04-2016 YPTB_RS01245 ab6eeea0e1971aa4817a823fc5ae39ae 371 SUPERFAMILY SSF51695 40 364 7.59E-91 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS01245 ab6eeea0e1971aa4817a823fc5ae39ae 371 PANTHER PTHR23344 12 371 2.9E-121 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPTB_RS01245 ab6eeea0e1971aa4817a823fc5ae39ae 371 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 358 4.2E-71 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPTB_RS01245 ab6eeea0e1971aa4817a823fc5ae39ae 371 Gene3D G3DSA:3.20.20.190 40 365 3.7E-91 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPTB_RS20665 1725f95b78350e083ec2f0bcc0130f15 166 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 4 162 6.4E-54 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPTB_RS18545 c729730cb4b9116eb163155a5ddb4d8c 100 PANTHER PTHR39169:SF1 1 100 3.0E-47 T 22-04-2016 YPTB_RS18545 c729730cb4b9116eb163155a5ddb4d8c 100 SUPERFAMILY SSF54909 3 96 1.98E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPTB_RS18545 c729730cb4b9116eb163155a5ddb4d8c 100 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 1.0E-42 T 22-04-2016 IPR014910 Putative monooxygenase YdhR KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YPTB_RS18545 c729730cb4b9116eb163155a5ddb4d8c 100 PANTHER PTHR39169 1 100 3.0E-47 T 22-04-2016 YPTB_RS05875 9c032f10adec37b9b544d4db7076fbe7 133 Pfam PF06836 Protein of unknown function (DUF1240) 39 132 1.9E-38 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPTB_RS11450 8a8f2a6f339b06866761f056e0c9aa84 96 Pfam PF07383 Protein of unknown function (DUF1496) 36 94 8.8E-25 T 22-04-2016 IPR009971 Protein of unknown function DUF1496 YPTB_RS08275 151b228486a9e66123a066373597243d 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 319 1.4E-69 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS08275 151b228486a9e66123a066373597243d 361 PANTHER PTHR35564:SF3 2 351 3.2E-195 T 22-04-2016 YPTB_RS08275 151b228486a9e66123a066373597243d 361 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 22 319 2.9E-79 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPTB_RS08275 151b228486a9e66123a066373597243d 361 PANTHER PTHR35564 2 351 3.2E-195 T 22-04-2016 YPTB_RS09745 c522412da0efa5d96bd807578604a8aa 203 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 23 86 1.7E-28 T 22-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 YPTB_RS09745 c522412da0efa5d96bd807578604a8aa 203 Gene3D G3DSA:1.10.260.40 28 85 6.6E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS09745 c522412da0efa5d96bd807578604a8aa 203 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 100 197 2.7E-15 T 22-04-2016 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 YPTB_RS09670 dccb978014c1dd0770f4078f845c3385 157 Pfam PF05926 Phage head completion protein (GPL) 19 157 7.4E-46 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 YPTB_RS01185 e80040d2cc0da1b7f7e1f50cb080d6df 410 Hamap MF_00677 UPF0261 protein . 2 402 53.649 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YPTB_RS01185 e80040d2cc0da1b7f7e1f50cb080d6df 410 PANTHER PTHR31862 1 402 1.7E-230 T 22-04-2016 YPTB_RS01185 e80040d2cc0da1b7f7e1f50cb080d6df 410 PIRSF PIRSF033271 1 403 4.1E-204 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YPTB_RS01185 e80040d2cc0da1b7f7e1f50cb080d6df 410 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 399 1.6E-159 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YPTB_RS06000 5caab692315d0d138f0a7133814e061d 127 PANTHER PTHR28259 1 126 2.3E-45 T 22-04-2016 YPTB_RS06000 5caab692315d0d138f0a7133814e061d 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 3.3E-38 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS06000 5caab692315d0d138f0a7133814e061d 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 5.0E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS06000 5caab692315d0d138f0a7133814e061d 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.06 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPTB_RS08230 116822c1d40b8d7c2bcb90dde62d853e 138 Pfam PF14485 Domain of unknown function (DUF4431) 87 134 1.6E-19 T 22-04-2016 IPR027826 Domain of unknown function DUF4431 YPTB_RS07090 721e8606295248a94c0fcb486a5db388 468 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 21 120 2.0E-55 T 22-04-2016 IPR009826 DNA circulation, N-terminal YPTB_RS07090 721e8606295248a94c0fcb486a5db388 468 Pfam PF07157 DNA circularisation protein N-terminus 25 118 2.6E-33 T 22-04-2016 IPR009826 DNA circulation, N-terminal YPTB_RS20725 05d74d1cf2321ac67797ce71a57c0527 572 PIRSF PIRSF001432 1 565 2.2E-279 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPTB_RS20725 05d74d1cf2321ac67797ce71a57c0527 572 Pfam PF06917 Periplasmic pectate lyase 19 572 0.0 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPTB_RS15030 0130fd972b2e1987561ffd590eb1e807 132 SUPERFAMILY SSF52833 11 123 6.86E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15030 0130fd972b2e1987561ffd590eb1e807 132 PANTHER PTHR30041 10 123 6.9E-39 T 22-04-2016 YPTB_RS15030 0130fd972b2e1987561ffd590eb1e807 132 PANTHER PTHR30041:SF3 10 123 6.9E-39 T 22-04-2016 YPTB_RS15030 0130fd972b2e1987561ffd590eb1e807 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 10 124 2.1E-42 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR YPTB_RS15030 0130fd972b2e1987561ffd590eb1e807 132 Gene3D G3DSA:3.40.30.10 10 123 5.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPTB_RS15030 0130fd972b2e1987561ffd590eb1e807 132 Pfam PF03960 ArsC family 13 122 1.8E-14 T 22-04-2016 IPR006660 Arsenate reductase-like YPTB_RS00735 01af90948fa499a2c8fcf342512c2767 135 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 3 115 4.0E-50 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 YPTB_RS00735 01af90948fa499a2c8fcf342512c2767 135 Pfam PF07226 Protein of unknown function (DUF1422) 4 115 3.9E-51 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 YPTB_RS09775 4dd7cc3d045878a08b283efea14d7b60 71 Pfam PF13986 Domain of unknown function (DUF4224) 4 48 8.3E-17 T 22-04-2016 IPR025319 Domain of unknown function DUF4224 YPTB_RS17090 0f3f6ea8ab42746cb1fb4326216fbd0f 109 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 1.3E-42 T 22-04-2016 IPR019697 Bacteriophage HP1, Orf28 YPTB_RS18860 fc9b2680001628c9c3ad61856e0d4b52 126 Pfam PF06476 Protein of unknown function (DUF1090) 13 120 3.2E-38 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 YPTB_RS19170 98f56058f10323ad8d040ccc2fbae2c6 93 SUPERFAMILY SSF52038 1 87 1.31E-28 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YPTB_RS19170 98f56058f10323ad8d040ccc2fbae2c6 93 Pfam PF01337 Barstar (barnase inhibitor) 6 80 3.5E-11 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YPTB_RS19170 98f56058f10323ad8d040ccc2fbae2c6 93 Gene3D G3DSA:3.30.370.10 1 83 3.1E-22 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YPTB_RS10035 43f37eb09fae70a43e19e225a52e0731 108 Pfam PF07377 Protein of unknown function (DUF1493) 1 108 6.1E-39 T 22-04-2016 IPR010862 Protein of unknown function DUF1493 YPTB_RS14625 0886e3209c231278ec955069f48ab83c 158 PANTHER PTHR42641:SF2 1 158 1.3E-111 T 22-04-2016 YPTB_RS14625 0886e3209c231278ec955069f48ab83c 158 Pfam PF05232 Chlorhexidine efflux transporter 74 136 1.3E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter YPTB_RS14625 0886e3209c231278ec955069f48ab83c 158 Pfam PF05232 Chlorhexidine efflux transporter 6 68 4.6E-24 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter YPTB_RS14625 0886e3209c231278ec955069f48ab83c 158 PANTHER PTHR42641 1 158 1.3E-111 T 22-04-2016 YPTB_RS01705 950ea0865e292f8326022dd942de9186 71 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 8 71 5.7E-21 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis YPTB_RS01705 950ea0865e292f8326022dd942de9186 71 PANTHER PTHR34472 3 71 6.3E-17 T 22-04-2016 YPTB_RS01705 950ea0865e292f8326022dd942de9186 71 Gene3D G3DSA:3.10.20.30 7 71 2.7E-20 T 22-04-2016 IPR012675 Beta-grasp domain YPTB_RS01705 950ea0865e292f8326022dd942de9186 71 PANTHER PTHR34472:SF1 3 71 6.3E-17 T 22-04-2016 YPTB_RS01705 950ea0865e292f8326022dd942de9186 71 Pfam PF02597 ThiS family 12 71 1.9E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPTB_RS01705 950ea0865e292f8326022dd942de9186 71 SUPERFAMILY SSF54285 7 71 1.6E-15 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTB_RS18760 3080b7ea96856488f9bbbf2d30d5e68c 582 SUPERFAMILY SSF81606 328 580 3.01E-10 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 YPTB_RS18760 3080b7ea96856488f9bbbf2d30d5e68c 582 Gene3D G3DSA:3.60.40.10 314 580 6.2E-7 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 YPTB_RS18760 3080b7ea96856488f9bbbf2d30d5e68c 582 Pfam PF13672 Protein phosphatase 2C 321 566 2.3E-56 T 22-04-2016 YPTB_RS15425 2c83255975abda464dd4e86eb85f8eb5 317 Pfam PF14581 SseB protein C-terminal domain 192 302 6.6E-35 T 22-04-2016 IPR027945 SseB protein, C-terminal YPTB_RS15425 2c83255975abda464dd4e86eb85f8eb5 317 Pfam PF07179 SseB protein N-terminal domain 48 176 5.1E-26 T 22-04-2016 IPR009839 SseB protein N-terminal domain YPTB_RS07370 14b42bb119c063557c68da418adda833 162 ProDom PD022058 PSAF MYFF 1 162 2.0E-89 T 22-04-2016 YPTB_RS06615 de3841ea2f7241333dc4d2de77c68d29 150 PANTHER PTHR23404 1 150 4.5E-46 T 22-04-2016 YPTB_RS06615 de3841ea2f7241333dc4d2de77c68d29 150 Gene3D G3DSA:3.90.1170.40 3 150 1.4E-55 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS06615 de3841ea2f7241333dc4d2de77c68d29 150 SUPERFAMILY SSF54690 5 150 1.57E-53 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS06615 de3841ea2f7241333dc4d2de77c68d29 150 Pfam PF02391 MoaE protein 12 121 5.5E-36 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS06615 de3841ea2f7241333dc4d2de77c68d29 150 PANTHER PTHR23404:SF2 1 150 4.5E-46 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPTB_RS15285 1370726cdb35b6d9cc511c2b29eaabc0 155 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 8 153 1.8E-62 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPTB_RS19045 d880a82fb032e010a0422f32487d98c3 260 Pfam PF02405 Permease MlaE 45 256 4.7E-76 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YPTB_RS19045 d880a82fb032e010a0422f32487d98c3 260 PANTHER PTHR30188:SF4 1 260 1.2E-129 T 22-04-2016 YPTB_RS19045 d880a82fb032e010a0422f32487d98c3 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.2E-104 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YPTB_RS19045 d880a82fb032e010a0422f32487d98c3 260 PANTHER PTHR30188 1 260 1.2E-129 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YPTB_RS11895 c1fc9ec144254d64f4ae1b354974e6c4 342 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 3.0E-105 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YPTB_RS11895 c1fc9ec144254d64f4ae1b354974e6c4 342 PIRSF PIRSF026166 1 335 9.5E-136 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YPTB_RS11895 c1fc9ec144254d64f4ae1b354974e6c4 342 PANTHER PTHR18640 1 342 1.1E-142 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YPTB_RS11895 c1fc9ec144254d64f4ae1b354974e6c4 342 PANTHER PTHR18640:SF9 1 342 1.1E-142 T 22-04-2016 YPTB_RS12905 e66bd506189858e93c24a05368bc0e70 387 PANTHER PTHR33420 93 387 2.7E-192 T 22-04-2016 YPTB_RS12905 e66bd506189858e93c24a05368bc0e70 387 SUPERFAMILY SSF49401 251 386 1.29E-21 T 22-04-2016 IPR008966 Adhesion domain YPTB_RS12905 e66bd506189858e93c24a05368bc0e70 387 Pfam PF00419 Fimbrial protein 249 386 2.4E-13 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS12905 e66bd506189858e93c24a05368bc0e70 387 Gene3D G3DSA:2.60.40.1090 251 387 3.1E-20 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPTB_RS12905 e66bd506189858e93c24a05368bc0e70 387 PANTHER PTHR33420:SF1 93 387 2.7E-192 T 22-04-2016 YPTB_RS01485 51d8c302f0a166370563b9fc97ae40e1 501 PANTHER PTHR30563 2 500 4.7E-155 T 22-04-2016 YPTB_RS01485 51d8c302f0a166370563b9fc97ae40e1 501 Pfam PF02646 RmuC family 171 467 4.6E-105 T 22-04-2016 IPR003798 DNA recombination RmuC YPTB_RS13785 714931b2b247a82e49f9662f49032682 220 Pfam PF16809 NleF caspase inhibitor 37 176 3.3E-24 T 22-04-2016 IPR031829 Effector protein NleF YPTB_RS09335 655446394ff80fa2f02100fb9f4bc8d8 156 Pfam PF03748 Flagellar basal body-associated protein FliL 54 154 2.0E-21 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 YPTB_RS09335 655446394ff80fa2f02100fb9f4bc8d8 156 PANTHER PTHR35091:SF1 1 156 7.0E-64 T 22-04-2016 YPTB_RS09335 655446394ff80fa2f02100fb9f4bc8d8 156 PANTHER PTHR35091 1 156 7.0E-64 T 22-04-2016 YPTB_RS07985 19f0d2c0523dd0c12d1811a5cb49f90a 55 Gene3D G3DSA:1.10.10.620 1 52 2.9E-28 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain YPTB_RS07985 19f0d2c0523dd0c12d1811a5cb49f90a 55 Pfam PF04957 Ribosome modulation factor 1 52 7.9E-31 T 22-04-2016 IPR007040 Ribosome modulation factor YPTB_RS07985 19f0d2c0523dd0c12d1811a5cb49f90a 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 2.0E-25 T 22-04-2016 IPR007040 Ribosome modulation factor YPTB_RS07985 19f0d2c0523dd0c12d1811a5cb49f90a 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.624 T 22-04-2016 IPR007040 Ribosome modulation factor YPTB_RS04810 df0e7726cd12dc5665bdfc5646977d40 67 Pfam PF13318 Protein of unknown function (DUF4089) 16 65 2.1E-17 T 22-04-2016 IPR025148 Protein of unknown function DUF4089 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 Gene3D G3DSA:3.40.710.10 232 475 3.0E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 26 473 2.9E-165 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 291 313 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 51 452 9.7E-170 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 PANTHER PTHR30023 13 478 3.1E-143 T 22-04-2016 YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 SUPERFAMILY SSF56601 28 479 2.54E-104 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPTB_RS02690 4fb551aaa0853fb8d0ad4b325d027ca3 482 PANTHER PTHR30023:SF0 13 478 3.1E-143 T 22-04-2016 YPTB_RS17385 68181e66f6446e6f01c135772a39a59d 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.063 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YPTB_RS17385 68181e66f6446e6f01c135772a39a59d 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 6.0E-59 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YPTB_RS17385 68181e66f6446e6f01c135772a39a59d 140 PANTHER PTHR33317 1 137 2.9E-46 T 22-04-2016 YPTB_RS17385 68181e66f6446e6f01c135772a39a59d 140 SMART SM00732 4 104 6.1E-43 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPTB_RS17385 68181e66f6446e6f01c135772a39a59d 140 Pfam PF03652 Holliday junction resolvase 5 137 5.2E-43 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YPTB_RS17385 68181e66f6446e6f01c135772a39a59d 140 Gene3D G3DSA:3.30.420.140 4 138 2.4E-48 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPTB_RS17385 68181e66f6446e6f01c135772a39a59d 140 SUPERFAMILY SSF53098 4 137 3.34E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPTB_RS12110 0011f363c3647c198eba58553a486792 336 Pfam PF13208 TerB N-terminal domain 131 333 5.8E-51 T 22-04-2016 IPR025266 TerB, N-terminal YPTB_RS05040 300d83bf5cb36a63640e37025bf6d9fd 187 PANTHER PTHR10108:SF835 1 181 1.4E-63 T 22-04-2016 YPTB_RS05040 300d83bf5cb36a63640e37025bf6d9fd 187 SUPERFAMILY SSF53335 1 183 2.25E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS05040 300d83bf5cb36a63640e37025bf6d9fd 187 Pfam PF08241 Methyltransferase domain 1 77 6.5E-19 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YPTB_RS05040 300d83bf5cb36a63640e37025bf6d9fd 187 Gene3D G3DSA:3.40.50.150 1 186 4.3E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB_RS05040 300d83bf5cb36a63640e37025bf6d9fd 187 PANTHER PTHR10108 1 181 1.4E-63 T 22-04-2016 YPTB_RS18885 c2581e6f8c711b661f0875c22a24ff5e 131 Pfam PF07681 DoxX 8 88 2.3E-16 T 22-04-2016 IPR032808 DoxX family YPTB_RS18885 c2581e6f8c711b661f0875c22a24ff5e 131 PANTHER PTHR33452:SF8 1 131 1.7E-89 T 22-04-2016 YPTB_RS18885 c2581e6f8c711b661f0875c22a24ff5e 131 PANTHER PTHR33452 1 131 1.7E-89 T 22-04-2016 YPTB_RS08840 ee76dea90543c0a38241fdd1d1139595 330 PANTHER PTHR33376:SF6 1 328 1.9E-196 T 22-04-2016 YPTB_RS08840 ee76dea90543c0a38241fdd1d1139595 330 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 39 291 9.2E-63 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 YPTB_RS08840 ee76dea90543c0a38241fdd1d1139595 330 PIRSF PIRSF006470 5 330 2.7E-97 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 YPTB_RS08840 ee76dea90543c0a38241fdd1d1139595 330 PANTHER PTHR33376 1 328 1.9E-196 T 22-04-2016 YPTB_RS08840 ee76dea90543c0a38241fdd1d1139595 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 315 5.9E-71 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 YPTB_RS12890 fd9499ca5e97c9d63c368a7149081a48 388 Pfam PF14583 Oligogalacturonate lyase 1 386 6.6E-260 T 22-04-2016 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6|UniPathway: UPA00545 YPTB_RS12890 fd9499ca5e97c9d63c368a7149081a48 388 SUPERFAMILY SSF82171 15 382 3.4E-30 T 22-04-2016 YPTB_RS12890 fd9499ca5e97c9d63c368a7149081a48 388 Gene3D G3DSA:2.130.10.10 7 384 8.5E-78 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPTB_RS07675 424828927a78b70b5d9706f068f6e46f 315 PANTHER PTHR38785 2 315 5.3E-128 T 22-04-2016 YPTB_RS07675 424828927a78b70b5d9706f068f6e46f 315 Pfam PF04393 Protein of unknown function (DUF535) 33 310 4.4E-103 T 22-04-2016 IPR007488 Protein of unknown function DUF535 YPTB_RS10180 b687053842137d2bb59b9dbfc9beec8d 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 128 3.8E-48 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R YPTB_RS01060 79eab0db7e71118b381e4bcea79bf4f3 418 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.529 T 22-04-2016 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 UniPathway: UPA00566 YPTB_RS01060 79eab0db7e71118b381e4bcea79bf4f3 418 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 2.6E-10 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 YPTB_RS01060 79eab0db7e71118b381e4bcea79bf4f3 418 PANTHER PTHR30250:SF9 3 416 6.0E-185 T 22-04-2016 YPTB_RS01060 79eab0db7e71118b381e4bcea79bf4f3 418 PANTHER PTHR30250 3 416 6.0E-185 T 22-04-2016 YPTB_RS02305 3f21e6f603b35e30c66bc383d06599db 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 104 2.9E-34 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 YPTB_RS02305 3f21e6f603b35e30c66bc383d06599db 107 SUPERFAMILY SSF54913 3 105 4.45E-36 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB_RS02305 3f21e6f603b35e30c66bc383d06599db 107 Gene3D G3DSA:3.30.70.830 4 105 7.4E-40 T 22-04-2016 YPTB_RS02305 3f21e6f603b35e30c66bc383d06599db 107 PANTHER PTHR23419 1 107 4.8E-46 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 YPTB_RS08415 e604cec2aa252629252913a2b86928e0 135 PANTHER PTHR33931:SF2 1 135 7.3E-61 T 22-04-2016 YPTB_RS08415 e604cec2aa252629252913a2b86928e0 135 PANTHER PTHR33931 1 135 7.3E-61 T 22-04-2016 YPTB_RS08415 e604cec2aa252629252913a2b86928e0 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 24.141 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 YPTB_RS08415 e604cec2aa252629252913a2b86928e0 135 Pfam PF03788 LrgA family 23 113 7.8E-29 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 YPTB_RS09680 ef762c93f5694f994804d54a5e66d6d2 412 Pfam PF05125 Phage major capsid protein, P2 family 8 340 7.2E-143 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YPTB_RS09680 ef762c93f5694f994804d54a5e66d6d2 412 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 9 342 1.1E-89 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YPTB_RS09850 f04e59f3653dc583d3720171e0180b60 205 Pfam PF13240 zinc-ribbon domain 2 23 8.9E-6 T 22-04-2016 IPR026870 Zinc-ribbon domain YPTB_RS12460 22f70820e7e280f1621dc4508ab88494 155 PANTHER PTHR35603 1 155 3.5E-56 T 22-04-2016 YPTB_RS12460 22f70820e7e280f1621dc4508ab88494 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 3.5E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPTB_RS12460 22f70820e7e280f1621dc4508ab88494 155 PANTHER PTHR35603:SF1 1 155 3.5E-56 T 22-04-2016 YPTB_RS17225 af6001778f9f0ea4befe9d2c08e37485 145 Pfam PF13924 Lipocalin-like domain 7 143 2.0E-44 T 22-04-2016 IPR024311 Lipocalin-like domain YPTB_RS07310 fd0f8199e91bd514a2942cfbf7ce67b7 380 SUPERFAMILY SSF56529 155 361 4.19E-25 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS07310 fd0f8199e91bd514a2942cfbf7ce67b7 380 Gene3D G3DSA:3.90.850.10 167 356 1.7E-21 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS07310 fd0f8199e91bd514a2942cfbf7ce67b7 380 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 208 355 4.7E-9 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS07310 fd0f8199e91bd514a2942cfbf7ce67b7 380 PANTHER PTHR11820:SF82 171 367 1.5E-84 T 22-04-2016 YPTB_RS07310 fd0f8199e91bd514a2942cfbf7ce67b7 380 PANTHER PTHR11820 171 367 1.5E-84 T 22-04-2016 YPTB_RS14170 1ad16b1a4c89ff512c3f156bd7f258ab 169 PANTHER PTHR36926 1 168 1.0E-86 T 22-04-2016 YPTB_RS14170 1ad16b1a4c89ff512c3f156bd7f258ab 169 PANTHER PTHR36926:SF1 1 168 1.0E-86 T 22-04-2016 YPTB_RS14170 1ad16b1a4c89ff512c3f156bd7f258ab 169 Pfam PF02674 Colicin V production protein 4 142 3.1E-36 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 YPTB_RS06680 2863472c211093a8a212932ce1e8db82 369 PANTHER PTHR22893 1 362 1.1E-156 T 22-04-2016 YPTB_RS06680 2863472c211093a8a212932ce1e8db82 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 342 7.3E-90 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YPTB_RS06680 2863472c211093a8a212932ce1e8db82 369 Gene3D G3DSA:3.20.20.70 1 363 1.7E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPTB_RS06680 2863472c211093a8a212932ce1e8db82 369 PANTHER PTHR22893:SF24 1 362 1.1E-156 T 22-04-2016 YPTB_RS06680 2863472c211093a8a212932ce1e8db82 369 SUPERFAMILY SSF51395 1 365 5.13E-117 T 22-04-2016 YPTB_RS07495 728fef854898b71a25a61c7394c7bf94 223 Gene3D G3DSA:1.20.144.10 63 192 2.6E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07495 728fef854898b71a25a61c7394c7bf94 223 SUPERFAMILY SSF48317 5 212 8.83E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS07495 728fef854898b71a25a61c7394c7bf94 223 Pfam PF01569 PAP2 superfamily 88 212 3.5E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB_RS10725 5b9249e7be1416a06c33128d9a16134b 262 PANTHER PTHR30473:SF3 1 262 2.8E-226 T 22-04-2016 YPTB_RS10725 5b9249e7be1416a06c33128d9a16134b 262 SUPERFAMILY SSF52540 57 239 7.09E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS10725 5b9249e7be1416a06c33128d9a16134b 262 Pfam PF02562 PhoH-like protein 57 261 2.3E-77 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 YPTB_RS10725 5b9249e7be1416a06c33128d9a16134b 262 PANTHER PTHR30473 1 262 2.8E-226 T 22-04-2016 YPTB_RS10725 5b9249e7be1416a06c33128d9a16134b 262 Gene3D G3DSA:3.40.50.300 57 261 1.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS21445 671f1d6ac4dff2c4555e30eac6cc0319 127 Pfam PF03899 ATP synthase I chain 13 109 3.0E-18 T 22-04-2016 IPR005598 ATP synthase protein I YPTB_RS01620 41e9996442fac601608aedc0cb2bf621 183 SUPERFAMILY SSF55729 2 171 2.23E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS01620 41e9996442fac601608aedc0cb2bf621 183 Pfam PF13673 Acetyltransferase (GNAT) domain 49 149 3.1E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPTB_RS01620 41e9996442fac601608aedc0cb2bf621 183 PANTHER PTHR13947 62 178 3.7E-15 T 22-04-2016 YPTB_RS01620 41e9996442fac601608aedc0cb2bf621 183 Gene3D G3DSA:3.40.630.30 26 171 4.9E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPTB_RS01905 6de547dbbe82cf0011c61d6f5214a0c4 215 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 28 195 1.1E-37 T 22-04-2016 IPR012842 Type III secretion system HrpE/YscL YPTB_RS01905 6de547dbbe82cf0011c61d6f5214a0c4 215 Pfam PF06188 HrpE/YscL/FliH and V-type ATPase subunit E 19 162 3.4E-5 T 22-04-2016 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E YPTB_RS08410 bab989c3a985eb93830e4637e0d4ecfb 231 PANTHER PTHR30249:SF5 1 230 1.9E-113 T 22-04-2016 YPTB_RS08410 bab989c3a985eb93830e4637e0d4ecfb 231 PANTHER PTHR30249 1 230 1.9E-113 T 22-04-2016 YPTB_RS08410 bab989c3a985eb93830e4637e0d4ecfb 231 Pfam PF04172 LrgB-like family 12 223 2.8E-78 T 22-04-2016 IPR007300 CidB/LrgB family YPTB_RS08410 bab989c3a985eb93830e4637e0d4ecfb 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 5.4E-98 T 22-04-2016 IPR005261 Conserved hypothetical protein CHP00659 YPTB_RS12220 b19dcfaaa23bf06fe23577a1fd8d8bff 109 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 101 1.9E-23 T 22-04-2016 IPR009241 Toxin HigB-like YPTB_RS14515 614883efac4dd8f139288bdf408ed9b1 160 Gene3D G3DSA:3.40.1000.10 6 156 5.5E-35 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTB_RS14515 614883efac4dd8f139288bdf408ed9b1 160 SUPERFAMILY SSF55724 5 155 6.8E-37 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTB_RS14515 614883efac4dd8f139288bdf408ed9b1 160 Pfam PF08786 Domain of unknown function (DUF1795) 12 151 1.4E-33 T 22-04-2016 IPR014894 Protein DcrB YPTB_RS14695 55d4aff7af36db8a0716767dd0d44864 115 Pfam PF14282 FlxA-like protein 13 107 9.7E-24 T 22-04-2016 IPR025577 FlxA-like protein YPTB_RS11840 ecf740b9d862cdfd5fcd28b626a3198c 147 Pfam PF10754 Protein of unknown function (DUF2569) 7 145 1.1E-45 T 22-04-2016 IPR019690 Protein of unknown function DUF2569 YPTB_RS17005 b64b79c57581ee57c6569e72db67a700 355 PIRSF PIRSF018494 1 350 2.0E-150 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTB_RS17005 b64b79c57581ee57c6569e72db67a700 355 Pfam PF04860 Phage portal protein 104 330 6.6E-12 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein YPTB_RS17005 b64b79c57581ee57c6569e72db67a700 355 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 62 332 7.6E-64 T 22-04-2016 IPR006430 Phage portal protein PBSX family YPTB_RS17075 bf4153b58b0a3f20f2897c165338f0b8 91 Pfam PF10963 Phage tail assembly chaperone 9 91 6.4E-28 T 22-04-2016 IPR024406 Phage tail assembly chaperone TAC_10 YPTB_RS17075 bf4153b58b0a3f20f2897c165338f0b8 91 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 9 90 6.0E-41 T 22-04-2016 IPR024406 Phage tail assembly chaperone TAC_10 YPTB_RS20445 7b75a2f05fcf6dd6f7325f21569875e2 154 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 152 9.9E-66 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPTB_RS17020 7d03b9c5ed3f74449806a742a620534f 342 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 12 323 2.5E-95 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YPTB_RS17020 7d03b9c5ed3f74449806a742a620534f 342 Pfam PF05125 Phage major capsid protein, P2 family 12 327 2.8E-99 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YPTB_RS13000 13f29385582a9f010a067b631c8915da 418 SUPERFAMILY SSF52151 86 271 2.09E-32 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPTB_RS13000 13f29385582a9f010a067b631c8915da 418 Pfam PF01734 Patatin-like phospholipase 86 271 3.1E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 YPTB_RS13000 13f29385582a9f010a067b631c8915da 418 Gene3D G3DSA:3.40.1090.10 86 271 3.0E-17 T 22-04-2016 YPTB_RS17550 20c5160bb72c820623e304396d59b7c2 111 Pfam PF03400 IS1 transposase 2 36 2.5E-9 T 22-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 YPTB_RS18530 ee00ea50c65135c9a6f4aa7b249725d6 67 Gene3D G3DSA:1.10.3290.10 1 60 2.6E-5 T 22-04-2016 IPR003812 Fido domain YPTB_RS01300 13e373c4376a9f46072abdc975ed5a96 139 Pfam PF10694 Protein of unknown function (DUF2500) 5 132 2.1E-40 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 YPTB_RS08140 5ba887914dcdf99a74fef2883af1dec8 239 PANTHER PTHR11941 11 236 5.3E-39 T 22-04-2016 YPTB_RS08140 5ba887914dcdf99a74fef2883af1dec8 239 SUPERFAMILY SSF52096 11 230 2.19E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS08140 5ba887914dcdf99a74fef2883af1dec8 239 Gene3D G3DSA:3.90.226.10 12 228 1.8E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPTB_RS08140 5ba887914dcdf99a74fef2883af1dec8 239 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 229 3.0E-30 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPTB_RS07220 4d44c3e1a1c9ab52894688b9cf30be18 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 6.0E-63 T 22-04-2016 IPR020489 Uncharacterised protein family YejG YPTB_RS07220 4d44c3e1a1c9ab52894688b9cf30be18 114 Pfam PF13989 YejG-like protein 4 108 2.3E-51 T 22-04-2016 IPR020489 Uncharacterised protein family YejG YPTB_RS13885 dfd28f59f92ee4788cee2a138d4fcca8 272 PANTHER PTHR10992 22 261 8.5E-71 T 22-04-2016 YPTB_RS13885 dfd28f59f92ee4788cee2a138d4fcca8 272 Gene3D G3DSA:3.40.50.1820 20 261 4.8E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS13885 dfd28f59f92ee4788cee2a138d4fcca8 272 SUPERFAMILY SSF53474 20 261 5.96E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS13885 dfd28f59f92ee4788cee2a138d4fcca8 272 PANTHER PTHR10992:SF698 22 261 8.5E-71 T 22-04-2016 YPTB_RS13885 dfd28f59f92ee4788cee2a138d4fcca8 272 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 22 259 6.8E-84 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS13885 dfd28f59f92ee4788cee2a138d4fcca8 272 Pfam PF12697 Alpha/beta hydrolase family 25 253 3.3E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPTB_RS13885 dfd28f59f92ee4788cee2a138d4fcca8 272 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 18 260 35.416 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPTB_RS00620 68e7a3c221b6fdb87eaec8ec265331f5 151 PANTHER PTHR37290:SF1 2 145 1.3E-88 T 22-04-2016 YPTB_RS00620 68e7a3c221b6fdb87eaec8ec265331f5 151 Pfam PF05360 yiaA/B two helix domain 12 64 6.3E-21 T 22-04-2016 IPR008024 YiaAB two helix YPTB_RS00620 68e7a3c221b6fdb87eaec8ec265331f5 151 Pfam PF05360 yiaA/B two helix domain 75 127 2.5E-22 T 22-04-2016 IPR008024 YiaAB two helix YPTB_RS00620 68e7a3c221b6fdb87eaec8ec265331f5 151 PANTHER PTHR37290 2 145 1.3E-88 T 22-04-2016 YPTB_RS20160 a49dc447456fc4accdbb24c44f3291db 143 Pfam PF06836 Protein of unknown function (DUF1240) 50 143 7.0E-33 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPTB_RS19435 b3691c342d24eb3de10b632daffa5095 317 PANTHER PTHR32196:SF39 1 316 2.5E-176 T 22-04-2016 YPTB_RS19435 b3691c342d24eb3de10b632daffa5095 317 PANTHER PTHR32196 1 316 2.5E-176 T 22-04-2016 YPTB_RS19435 b3691c342d24eb3de10b632daffa5095 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 309 2.8E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS14995 db42b06b84c28839747feb4283f5e185 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 168 7.5E-34 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPTB_RS07295 eaf393dd61a8b6a3f984510ce6bed5cc 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 61 7.3E-5 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein YPTB_RS07295 eaf393dd61a8b6a3f984510ce6bed5cc 84 PANTHER PTHR36931 1 84 4.4E-39 T 22-04-2016 YPTB_RS14405 b2fcd233094037d21a7538a09882c69c 86 Pfam PF05488 PAAR motif 8 76 6.7E-12 T 22-04-2016 IPR008727 PAAR motif YPTB_RS17015 ac1419590a60bd676f06601d56eae30b 362 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 262 6.6E-42 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 YPTB_RS01150 1b6f8f65172001ccb6d16760aabbb380 66 Pfam PF13627 Prokaryotic lipoprotein-attachment site 10 29 1.1E-8 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site YPTB_RS16120 18c0b35e96b10ae902fa39657e505a34 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 36.594 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YPTB_RS16120 18c0b35e96b10ae902fa39657e505a34 135 Pfam PF16358 RcsF lipoprotein 39 133 4.8E-52 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 168 7.6E-8 T 22-04-2016 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 110 127 7.6E-8 T 22-04-2016 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 128 147 7.6E-8 T 22-04-2016 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 Gene3D G3DSA:3.30.1330.60 51 166 2.2E-34 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PANTHER PTHR30128:SF12 1 165 1.4E-115 T 22-04-2016 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PANTHER PTHR30128 1 165 1.4E-115 T 22-04-2016 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PRINTS PR01021 OMPA domain signature 65 87 3.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PRINTS PR01021 OMPA domain signature 110 126 3.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 PRINTS PR01021 OMPA domain signature 95 110 3.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 Pfam PF00691 OmpA family 64 159 4.5E-18 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS03340 7aa29b5c0cab4880d538acebed2ca097 168 SUPERFAMILY SSF103088 51 165 2.09E-32 T 22-04-2016 IPR006665 OmpA-like domain YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 Gene3D G3DSA:3.40.50.1240 2 250 1.5E-97 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 SMART SM00855 5 191 9.7E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.8E-126 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 SUPERFAMILY SSF53254 4 247 3.3E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 128 2.4E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 PANTHER PTHR11931 1 250 4.1E-170 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YPTB_RS06470 6b0446fb5ba0fc12a1c416885e5ea31b 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.166 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YPTB_RS09000 dd8ee5a4814f029f762089069028736b 292 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 20 290 1.2E-142 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 YPTB_RS09000 dd8ee5a4814f029f762089069028736b 292 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 21 290 5.9E-112 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YPTB_RS09000 dd8ee5a4814f029f762089069028736b 292 PANTHER PTHR32502 5 291 4.9E-186 T 22-04-2016 YPTB_RS09000 dd8ee5a4814f029f762089069028736b 292 PANTHER PTHR32502:SF5 5 291 4.9E-186 T 22-04-2016 YPTB_RS12295 1dddfba5fc25049b7a874eeeee46ced9 334 Pfam PF07859 alpha/beta hydrolase fold 89 308 2.8E-21 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 YPTB_RS12295 1dddfba5fc25049b7a874eeeee46ced9 334 SUPERFAMILY SSF53474 68 320 6.26E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS12295 1dddfba5fc25049b7a874eeeee46ced9 334 PANTHER PTHR23024:SF47 66 329 2.4E-57 T 22-04-2016 YPTB_RS12295 1dddfba5fc25049b7a874eeeee46ced9 334 PANTHER PTHR23024 66 329 2.4E-57 T 22-04-2016 YPTB_RS12295 1dddfba5fc25049b7a874eeeee46ced9 334 Gene3D G3DSA:3.40.50.1820 58 330 7.3E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPTB_RS08250 8cac6c73c843bbbaee9b0a2325a4e034 1140 PANTHER PTHR36153:SF1 1 1122 0.0 T 22-04-2016 YPTB_RS08250 8cac6c73c843bbbaee9b0a2325a4e034 1140 PANTHER PTHR36153 1 1122 0.0 T 22-04-2016 YPTB_RS08250 8cac6c73c843bbbaee9b0a2325a4e034 1140 Pfam PF06744 Type VI secretion protein IcmF C-terminal 868 1066 1.2E-56 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPTB_RS08250 8cac6c73c843bbbaee9b0a2325a4e034 1140 Pfam PF06761 Intracellular multiplication and human macrophage-killing 418 735 2.6E-70 T 22-04-2016 IPR009612 ImcF-related YPTB_RS20385 d0346e7fedfbc017499471a4b06034e8 89 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 4.8E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS20385 d0346e7fedfbc017499471a4b06034e8 89 Gene3D G3DSA:3.30.1660.10 18 89 1.3E-26 T 22-04-2016 IPR025543 Dodecin-like YPTB_RS20385 d0346e7fedfbc017499471a4b06034e8 89 SUPERFAMILY SSF159871 3 89 2.35E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPTB_RS20385 d0346e7fedfbc017499471a4b06034e8 89 PANTHER PTHR34156:SF9 2 89 3.0E-52 T 22-04-2016 YPTB_RS20385 d0346e7fedfbc017499471a4b06034e8 89 PANTHER PTHR34156 2 89 3.0E-52 T 22-04-2016 YPTB_RS20965 f5180d67854c65b996fb0d1737ca5d89 409 SUPERFAMILY SSF116734 2 209 6.21E-43 T 22-04-2016 YPTB_RS20965 f5180d67854c65b996fb0d1737ca5d89 409 SUPERFAMILY SSF116734 201 405 2.62E-36 T 22-04-2016 YPTB_RS20965 f5180d67854c65b996fb0d1737ca5d89 409 Pfam PF01420 Type I restriction modification DNA specificity domain 3 183 5.0E-13 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 YPTB_RS20965 f5180d67854c65b996fb0d1737ca5d89 409 Pfam PF01420 Type I restriction modification DNA specificity domain 209 388 4.3E-15 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 YPTB_RS20965 f5180d67854c65b996fb0d1737ca5d89 409 PANTHER PTHR30408 2 219 2.5E-25 T 22-04-2016 YPTB_RS20965 f5180d67854c65b996fb0d1737ca5d89 409 PANTHER PTHR30408:SF2 2 219 2.5E-25 T 22-04-2016 YPTB_RS05415 5b8872371b181aea2a9a0dd8083c0c1b 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 117 3.6E-62 T 22-04-2016 IPR019693 Biofilm formation regulator YbaJ YPTB_RS15965 02dc4ab532178ac7921e11f7c1eef281 149 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 4.7E-65 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 YPTB_RS15965 02dc4ab532178ac7921e11f7c1eef281 149 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 149 1.0E-76 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 YPTB_RS11310 945dc0dc66cae458d1a4d758598de209 218 Gene3D G3DSA:3.90.850.10 13 216 6.7E-74 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS11310 945dc0dc66cae458d1a4d758598de209 218 PANTHER PTHR11820 16 210 6.4E-82 T 22-04-2016 YPTB_RS11310 945dc0dc66cae458d1a4d758598de209 218 SUPERFAMILY SSF56529 11 212 3.92E-67 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS11310 945dc0dc66cae458d1a4d758598de209 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 207 1.5E-52 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPTB_RS19345 54ce61f4cf462698308f6b6942b6af2c 158 SUPERFAMILY SSF160631 53 141 1.26E-5 T 22-04-2016 YPTB_RS19345 54ce61f4cf462698308f6b6942b6af2c 158 Gene3D G3DSA:3.40.1580.10 51 124 2.1E-5 T 22-04-2016 IPR018958 SMI1/KNR4-like domain YPTB_RS04905 1773cd52b1519fa9f929afc8a250b807 248 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 147 223 1.8E-12 T 22-04-2016 IPR004356 Adhesin operon regulatory protein GO:0006355 YPTB_RS17450 51cd6ebe7236f4bb3339fc0684b53e87 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 5.9E-44 T 22-04-2016 IPR007416 Protein of unknown function DUF469 YPTB_RS17450 51cd6ebe7236f4bb3339fc0684b53e87 108 PANTHER PTHR38778:SF1 2 108 1.0E-56 T 22-04-2016 YPTB_RS17450 51cd6ebe7236f4bb3339fc0684b53e87 108 PANTHER PTHR38778 2 108 1.0E-56 T 22-04-2016 YPTB_RS17930 ec92b952c74de64a7993f7ab25dee321 85 Pfam PF05656 Protein of unknown function (DUF805) 25 83 1.7E-10 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 YPTB_RS17555 6d5d24012047454ba59f3fcc2aa3d4ae 40 Pfam PF12759 InsA C-terminal domain 1 36 7.0E-16 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTB_RS21925 5ad10d7ddc23e4642c65bd71a0953d88 83 PANTHER PTHR30540 1 82 8.2E-20 T 22-04-2016 YPTB_RS21925 5ad10d7ddc23e4642c65bd71a0953d88 83 Pfam PF02705 K+ potassium transporter 2 82 3.9E-15 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YPTB_RS14915 8d7fc306a17cda08286fed692f4dcf97 220 SUPERFAMILY SSF46785 66 117 2.31E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS14915 8d7fc306a17cda08286fed692f4dcf97 220 Gene3D G3DSA:1.10.10.10 67 103 1.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS07975 9d0c7603a5d15cdc781624310f058e34 198 Gene3D G3DSA:3.40.50.10610 14 195 6.1E-12 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YPTB_RS07975 9d0c7603a5d15cdc781624310f058e34 198 SUPERFAMILY SSF159594 44 196 2.35E-26 T 22-04-2016 YPTB_RS07975 9d0c7603a5d15cdc781624310f058e34 198 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 38 191 2.9E-38 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YPTB_RS01400 846f47e304178f3c6bc8a58cf962c506 163 Pfam PF04449 CS1 type fimbrial major subunit 25 160 1.9E-34 T 22-04-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 YPTB_RS06475 d84860f3f9cc43f1654f00386800ad67 111 Pfam PF07769 psiF repeat 33 65 4.0E-17 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat YPTB_RS06475 d84860f3f9cc43f1654f00386800ad67 111 Pfam PF07769 psiF repeat 76 108 6.7E-19 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat YPTB_RS02645 fdfab9e0056fffa510c7a5872e7c4bb3 91 SUPERFAMILY SSF47413 4 72 6.75E-31 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS02645 fdfab9e0056fffa510c7a5872e7c4bb3 91 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 1.3E-38 T 22-04-2016 YPTB_RS02645 fdfab9e0056fffa510c7a5872e7c4bb3 91 Gene3D G3DSA:1.10.260.40 2 72 1.2E-40 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPTB_RS16995 02276687ae1ff2b9da76ee190513807f 851 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 200 581 3.1E-118 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 YPTB_RS19570 5652563a08226f9675bfbfd8ee18df6e 74 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 70 8.8E-22 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 YPTB_RS19570 5652563a08226f9675bfbfd8ee18df6e 74 Gene3D G3DSA:2.10.260.10 45 70 7.9E-4 T 22-04-2016 YPTB_RS13455 02d5baf5e72a1fe7e555f99265275a0d 174 PANTHER PTHR38099 2 173 3.0E-86 T 22-04-2016 YPTB_RS13455 02d5baf5e72a1fe7e555f99265275a0d 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 1.5E-15 T 22-04-2016 IPR003772 Protein of unknown function DUF177 YPTB_RS01890 32ccc5c3faeb60fe4802a0c4d9cde4a0 83 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 45 83 2.2E-22 T 22-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 YPTB_RS18570 d17fee42ed9c0ee2fd71da10b1a3862c 483 PANTHER PTHR33451:SF4 1 473 3.6E-220 T 22-04-2016 YPTB_RS18570 d17fee42ed9c0ee2fd71da10b1a3862c 483 PANTHER PTHR33451 1 473 3.6E-220 T 22-04-2016 YPTB_RS18570 d17fee42ed9c0ee2fd71da10b1a3862c 483 Pfam PF03553 Na+/H+ antiporter family 17 188 2.3E-10 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 YPTB_RS01070 b074fa787470256b8392c6bcde71eac0 454 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.509 T 22-04-2016 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 UniPathway: UPA00566 YPTB_RS01070 b074fa787470256b8392c6bcde71eac0 454 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 442 8.3E-264 T 22-04-2016 YPTB_RS04400 04496d2ff4447d138832e930846f886f 395 Pfam PF07906 ShET2 enterotoxin, N-terminal region 10 280 4.1E-106 T 22-04-2016 IPR012927 ShET2 enterotoxin, N-terminal YPTB_RS07340 caaed2ba44b4b2838eaf7b2384cf3ea0 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 320 1.6E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS07340 caaed2ba44b4b2838eaf7b2384cf3ea0 332 PANTHER PTHR32196 1 330 1.1E-176 T 22-04-2016 YPTB_RS07340 caaed2ba44b4b2838eaf7b2384cf3ea0 332 PANTHER PTHR32196:SF34 1 330 1.1E-176 T 22-04-2016 YPTB_RS03045 dd15ae4544ebe3adad48adb0a04d06ab 427 Pfam PF01420 Type I restriction modification DNA specificity domain 280 413 3.4E-10 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 YPTB_RS03045 dd15ae4544ebe3adad48adb0a04d06ab 427 Pfam PF01420 Type I restriction modification DNA specificity domain 19 196 3.4E-9 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 YPTB_RS03045 dd15ae4544ebe3adad48adb0a04d06ab 427 SUPERFAMILY SSF116734 5 209 3.76E-35 T 22-04-2016 YPTB_RS03045 dd15ae4544ebe3adad48adb0a04d06ab 427 SUPERFAMILY SSF116734 213 426 8.5E-33 T 22-04-2016 YPTB_RS03045 dd15ae4544ebe3adad48adb0a04d06ab 427 PANTHER PTHR30408 213 427 2.2E-13 T 22-04-2016 YPTB_RS09720 cd3c1d10d7bbf559f1bd2b554789641a 90 Pfam PF10809 Protein of unknown function (DUF2732) 26 86 3.4E-16 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 YPTB_RS09720 cd3c1d10d7bbf559f1bd2b554789641a 90 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 29 90 2.0E-28 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 YPTB_RS01835 8f293858e06a2914bfd0dd76561ef50d 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 3.3E-34 T 22-04-2016 IPR007436 Protein of unknown function DUF485 YPTB_RS01835 8f293858e06a2914bfd0dd76561ef50d 103 PANTHER PTHR38598 2 103 3.5E-50 T 22-04-2016 YPTB_RS19550 19b780f3306f3543544988847ab708e5 140 Gene3D G3DSA:3.40.1000.10 1 138 9.5E-43 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTB_RS19550 19b780f3306f3543544988847ab708e5 140 Pfam PF08786 Domain of unknown function (DUF1795) 6 133 7.0E-35 T 22-04-2016 IPR014894 Protein DcrB YPTB_RS19550 19b780f3306f3543544988847ab708e5 140 SUPERFAMILY SSF55724 1 137 6.8E-44 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTB_RS12340 548c2bfa7e901a8d693f6db694760b29 152 SMART SM00953 15 140 5.7E-34 T 22-04-2016 IPR014914 RES domain YPTB_RS12340 548c2bfa7e901a8d693f6db694760b29 152 Pfam PF08808 RES domain 2 147 8.8E-25 T 22-04-2016 IPR014914 RES domain YPTB_RS03600 a0bbee94c5f440c02e8f5886ecc0d06f 500 PANTHER PTHR35565 1 497 0.0 T 22-04-2016 YPTB_RS03600 a0bbee94c5f440c02e8f5886ecc0d06f 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 492 1.3E-181 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS03600 a0bbee94c5f440c02e8f5886ecc0d06f 500 PANTHER PTHR35565:SF2 1 497 0.0 T 22-04-2016 YPTB_RS03600 a0bbee94c5f440c02e8f5886ecc0d06f 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 492 1.8E-209 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPTB_RS04270 6d4cb754275994ea8dede80990d14cf7 105 Pfam PF12084 Protein of unknown function (DUF3561) 1 104 7.2E-47 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 YPTB_RS04270 6d4cb754275994ea8dede80990d14cf7 105 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 105 1.0E-54 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 YPTB_RS13790 0936f56c86af4f2b783dd2a7deceba3d 190 Pfam PF16809 NleF caspase inhibitor 37 179 2.3E-37 T 22-04-2016 IPR031829 Effector protein NleF YPTB_RS11765 824ebe1eafc90d1c7d3606d3eb2a56f8 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 2.0E-26 T 22-04-2016 IPR018680 Protein of unknown function DUF2164 YPTB_RS02010 a76349cd9e6a078000de4ca4574cfb85 216 Gene3D G3DSA:3.40.50.720 4 207 4.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02010 a76349cd9e6a078000de4ca4574cfb85 216 Pfam PF13460 NAD(P)H-binding 8 195 4.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02010 a76349cd9e6a078000de4ca4574cfb85 216 SUPERFAMILY SSF51735 4 206 5.31E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain YPTB_RS02010 a76349cd9e6a078000de4ca4574cfb85 216 PANTHER PTHR15020 1 206 2.1E-40 T 22-04-2016 YPTB_RS17925 90b8eb6d56a89d321557d1835cef41b3 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 7.4E-9 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPTB_RS17925 90b8eb6d56a89d321557d1835cef41b3 155 PANTHER PTHR35603 1 155 1.4E-43 T 22-04-2016 YPTB_RS14220 650303a18453defb93a08d013e5d1a14 305 SUPERFAMILY SSF103481 186 283 1.01E-15 T 22-04-2016 YPTB_RS14220 650303a18453defb93a08d013e5d1a14 305 SUPERFAMILY SSF103481 42 138 3.79E-10 T 22-04-2016 YPTB_RS14220 650303a18453defb93a08d013e5d1a14 305 Pfam PF00892 EamA-like transporter family 4 135 2.4E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS14220 650303a18453defb93a08d013e5d1a14 305 Pfam PF00892 EamA-like transporter family 150 280 2.7E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPTB_RS14220 650303a18453defb93a08d013e5d1a14 305 PANTHER PTHR12715:SF12 3 305 2.4E-108 T 22-04-2016 YPTB_RS14220 650303a18453defb93a08d013e5d1a14 305 PANTHER PTHR12715 3 305 2.4E-108 T 22-04-2016 YPTB_RS18795 f2e69ba2d1b39804de49bf43176175ae 169 PANTHER PTHR30399:SF4 1 167 5.3E-114 T 22-04-2016 YPTB_RS18795 f2e69ba2d1b39804de49bf43176175ae 169 Pfam PF01863 Protein of unknown function DUF45 46 149 1.9E-11 T 22-04-2016 IPR002725 Protein of unknown function DUF45 YPTB_RS18795 f2e69ba2d1b39804de49bf43176175ae 169 PANTHER PTHR30399 1 167 5.3E-114 T 22-04-2016 YPTB_RS19645 33e9c4c6005fa496c28582e1e60684e6 438 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 431 2.9E-112 T 22-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein YPTB_RS19645 33e9c4c6005fa496c28582e1e60684e6 438 SUPERFAMILY SSF49879 31 104 2.29E-5 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 YPTB_RS06665 02476dfb1db1bd0577e384b2018ed448 157 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 24 134 7.0E-60 T 22-04-2016 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 YPTB_RS06665 02476dfb1db1bd0577e384b2018ed448 157 Pfam PF13801 Heavy-metal resistance 13 132 9.3E-15 T 22-04-2016 IPR025961 Heavy-metal resistance protein YPTB_RS00405 a5d67ba558b6fe71fbcd47adfa83b37c 144 SMART SM00450 41 139 2.0E-18 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS00405 a5d67ba558b6fe71fbcd47adfa83b37c 144 SUPERFAMILY SSF52821 17 143 1.7E-29 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS00405 a5d67ba558b6fe71fbcd47adfa83b37c 144 PANTHER PTHR12231 40 144 2.6E-53 T 22-04-2016 YPTB_RS00405 a5d67ba558b6fe71fbcd47adfa83b37c 144 Pfam PF00581 Rhodanese-like domain 44 134 1.1E-16 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS00405 a5d67ba558b6fe71fbcd47adfa83b37c 144 Gene3D G3DSA:3.40.250.10 26 143 4.9E-27 T 22-04-2016 IPR001763 Rhodanese-like domain YPTB_RS00405 a5d67ba558b6fe71fbcd47adfa83b37c 144 PANTHER PTHR12231:SF138 40 144 2.6E-53 T 22-04-2016 YPTB_RS19375 dfdd6a43a642e045c25b63e2ba0a71e8 155 PANTHER PTHR35603 1 155 3.5E-43 T 22-04-2016 YPTB_RS19375 dfdd6a43a642e045c25b63e2ba0a71e8 155 PANTHER PTHR35603:SF1 1 155 3.5E-43 T 22-04-2016 YPTB_RS19375 dfdd6a43a642e045c25b63e2ba0a71e8 155 Pfam PF05433 Glycine zipper 2TM domain 61 102 2.3E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPTB_RS10205 9135ee5e842a9301269d8a351ef06003 67 Pfam PF05489 Phage Tail Protein X 1 59 8.4E-29 T 22-04-2016 IPR008861 Phage Tail Protein X-like YPTB_RS05555 93791331392dfcc213080c32bc7a21c8 380 Pfam PF13692 Glycosyl transferases group 1 238 369 1.7E-10 T 22-04-2016 YPTB_RS05555 93791331392dfcc213080c32bc7a21c8 380 SUPERFAMILY SSF53756 5 343 1.57E-8 T 22-04-2016 YPTB_RS05930 4e3c38fba62c39dd5f3abff8a16e2836 342 PANTHER PTHR32196:SF21 23 339 5.0E-109 T 22-04-2016 YPTB_RS05930 4e3c38fba62c39dd5f3abff8a16e2836 342 PANTHER PTHR32196 23 339 5.0E-109 T 22-04-2016 YPTB_RS05930 4e3c38fba62c39dd5f3abff8a16e2836 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 329 1.1E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPTB_RS14125 057ebfca7dcd4f34525ab2e4cfaa8361 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 9.5E-38 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 YPTB_RS14125 057ebfca7dcd4f34525ab2e4cfaa8361 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 22-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- YPTB_RS14125 057ebfca7dcd4f34525ab2e4cfaa8361 183 PANTHER PTHR11124 1 175 9.1E-70 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 YPTB_RS14125 057ebfca7dcd4f34525ab2e4cfaa8361 183 PANTHER PTHR11124:SF14 1 175 9.1E-70 T 22-04-2016 YPTB_RS14125 057ebfca7dcd4f34525ab2e4cfaa8361 183 SUPERFAMILY SSF56300 1 174 2.06E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS14125 057ebfca7dcd4f34525ab2e4cfaa8361 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 1.3E-23 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type YPTB_RS14125 057ebfca7dcd4f34525ab2e4cfaa8361 183 Gene3D G3DSA:3.60.21.10 1 165 2.3E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPTB_RS08295 4319b6de13f22fabad05e8d744167453 207 Pfam PF16809 NleF caspase inhibitor 35 195 2.0E-55 T 22-04-2016 IPR031829 Effector protein NleF YPTB_RS07120 71ed0b9a193a1111dcb86f3749db5144 115 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 3 112 1.3E-19 T 22-04-2016 IPR018755 Bacteriophage Mu, Gp48 YPTB_RS07695 133e1570fd1e3e05e6402820997ef677 106 SUPERFAMILY SSF54736 21 105 5.23E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTB_RS07695 133e1570fd1e3e05e6402820997ef677 106 Gene3D G3DSA:3.30.1390.10 4 106 3.7E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTB_RS07695 133e1570fd1e3e05e6402820997ef677 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 21 101 28.223 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPTB_RS07695 133e1570fd1e3e05e6402820997ef677 106 PANTHER PTHR33473 1 106 2.6E-46 T 22-04-2016 YPTB_RS07695 133e1570fd1e3e05e6402820997ef677 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 7.5E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 YPTB_RS16940 8d9448c2fe367358256a147a5e7aa660 90 Pfam PF10743 Regulatory phage protein cox 3 86 2.4E-35 T 22-04-2016 IPR019679 Bacteriophage P2, regulatory protein Cox YPTB_RS20925 e9bcc46b7a364ea00e394c523cc6ae13 206 Pfam PF11726 Protein of unknown function (DUF3296) 16 204 1.7E-42 T 22-04-2016 IPR021723 Inovirus Gp2 YPTB_RS13650 6c5c3886e8c6bdd00feb1685acefb65b 371 SUPERFAMILY SSF56925 306 371 1.88E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS13650 6c5c3886e8c6bdd00feb1685acefb65b 371 SUPERFAMILY SSF56925 169 273 1.88E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPTB_RS15300 743f4b796755b5dc19012d0d4c3e056a 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 2.1E-37 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPTB_RS18270 bc572cd64718bed6d3157928d9e934a5 518 SUPERFAMILY SSF53300 160 222 3.85E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18270 bc572cd64718bed6d3157928d9e934a5 518 SUPERFAMILY SSF53300 370 498 3.85E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18270 bc572cd64718bed6d3157928d9e934a5 518 Gene3D G3DSA:3.40.50.410 372 476 1.9E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS18270 bc572cd64718bed6d3157928d9e934a5 518 Gene3D G3DSA:3.40.50.410 160 224 1.9E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A YPTB_RS13165 f1e451617d5ddd841bf8ac2dc4d5acb3 67 Pfam PF14001 YdfZ protein 3 66 8.1E-34 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ YPTB_RS13165 f1e451617d5ddd841bf8ac2dc4d5acb3 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 2 66 1.1E-36 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ YPTB_RS15820 89ee44525dc995d1e0d000c8038df0fe 122 PANTHER PTHR37549:SF1 1 122 5.9E-53 T 22-04-2016 YPTB_RS15820 89ee44525dc995d1e0d000c8038df0fe 122 PANTHER PTHR37549 1 122 5.9E-53 T 22-04-2016 YPTB_RS07905 72e2c11b3421f3a80ce7600f89cb8355 182 Gene3D G3DSA:3.30.1380.10 65 182 4.8E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS07905 72e2c11b3421f3a80ce7600f89cb8355 182 PANTHER PTHR37425 1 182 7.3E-80 T 22-04-2016 YPTB_RS07905 72e2c11b3421f3a80ce7600f89cb8355 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.4E-60 T 22-04-2016 IPR010275 Protein of unknown function DUF882 YPTB_RS07905 72e2c11b3421f3a80ce7600f89cb8355 182 SUPERFAMILY SSF55166 66 182 1.07E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPTB_RS09535 72fd037fea58b3d2916bce6e7fbdfdbb 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 1.5E-37 T 22-04-2016 IPR019705 Protein of unknown function DUF2594 YPTB_RS19210 2b9f511b27605610c56fa30012a59561 830 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 74 260 4.5E-14 T 22-04-2016 IPR018003 Insecticidal toxin complex/plasmid virulence protein YPTB_RS18640 28e6e00314c9f3db7c48b6190752dc30 1117 SUPERFAMILY SSF48208 978 1091 5.87E-37 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YPTB_RS18640 28e6e00314c9f3db7c48b6190752dc30 1117 SUPERFAMILY SSF48208 567 951 5.87E-37 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YPTB_RS18640 28e6e00314c9f3db7c48b6190752dc30 1117 PANTHER PTHR37469 568 1110 8.3E-66 T 22-04-2016 YPTB_RS06375 7892eb8d4c08008aa6a2dec741cded82 95 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 15 92 5.7E-30 T 22-04-2016 IPR011846 Cyd operon protein YbgE YPTB_RS06375 7892eb8d4c08008aa6a2dec741cded82 95 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 4 95 3.1E-41 T 22-04-2016 IPR011846 Cyd operon protein YbgE YPTB_RS01395 d3f39a8b4ad2dda870a61c49fa6718ac 777 Pfam PF16967 Fimbrial, FimD or usher-like 276 343 1.0E-23 T 22-04-2016 IPR032636 Pilus assembly protein domain YPTB_RS22185 aa4cf2b7aa0c0bf6c7110dbb09ae0467 221 SUPERFAMILY SSF88697 137 216 3.6E-14 T 22-04-2016 IPR015947 PUA-like domain YPTB_RS22185 aa4cf2b7aa0c0bf6c7110dbb09ae0467 221 Gene3D G3DSA:3.10.480.10 137 207 1.1E-11 T 22-04-2016 YPTB_RS22185 aa4cf2b7aa0c0bf6c7110dbb09ae0467 221 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 139 212 2.6E-23 T 22-04-2016 YPTB_RS04370 031fe6df0282b4f289de96d608ff3ee1 87 Gene3D G3DSA:1.10.10.10 4 87 1.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPTB_RS04370 031fe6df0282b4f289de96d608ff3ee1 87 Pfam PF04703 FaeA-like protein 34 70 1.2E-4 T 22-04-2016 IPR006793 FaeA-like protein GO:0006355|GO:0009289 YPTB_RS09915 5db5f7e107a13431885f572454c325e6 106 Pfam PF07102 Protein of unknown function (DUF1364) 10 91 2.4E-32 T 22-04-2016 IPR010774 Protein of unknown function DUF1364 YPTB_RS09915 5db5f7e107a13431885f572454c325e6 106 Gene3D G3DSA:3.30.50.20 26 93 9.1E-26 T 22-04-2016 YPTB_RS16400 ceeee8434126d625f6b83cf1cc3e16c7 121 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 36 117 1.4E-27 T 22-04-2016 IPR022204 Prepilin peptidase dependent protein C YPTB_RS16400 ceeee8434126d625f6b83cf1cc3e16c7 121 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPTB_RS14320 9df4b95254e50a22b2c95c85bb92c320 170 Pfam PF03918 Cytochrome C biogenesis protein 7 145 2.4E-56 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family YPTB_RS14320 9df4b95254e50a22b2c95c85bb92c320 170 PANTHER PTHR30009 1 150 3.4E-35 T 22-04-2016 YPTB_RS14320 9df4b95254e50a22b2c95c85bb92c320 170 PANTHER PTHR30009:SF7 1 150 3.4E-35 T 22-04-2016 YPTB_RS07785 10ced6011bea23e54455784824eb097f 588 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 8.4E-160 T 22-04-2016 IPR003776 YcaO-like domain YPTB_RS07785 10ced6011bea23e54455784824eb097f 588 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 8.8E-80 T 22-04-2016 IPR003776 YcaO-like domain YPTB_RS07130 d877c4efff07a1da037c515efa0b8651 139 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 27 139 3.0E-21 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPTB_RS17885 d06f4547f9c5381f7c40430b87937260 496 Pfam PF07906 ShET2 enterotoxin, N-terminal region 8 294 2.9E-109 T 22-04-2016 IPR012927 ShET2 enterotoxin, N-terminal YPTB_RS18620 a9f8f2140777836e7d37eac12c4712b6 272 PANTHER PTHR32243 1 272 1.3E-142 T 22-04-2016 YPTB_RS18620 a9f8f2140777836e7d37eac12c4712b6 272 PANTHER PTHR32243:SF8 1 272 1.3E-142 T 22-04-2016 YPTB_RS18620 a9f8f2140777836e7d37eac12c4712b6 272 SUPERFAMILY SSF161098 6 267 1.57E-67 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS18620 a9f8f2140777836e7d37eac12c4712b6 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 264 2.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS18620 a9f8f2140777836e7d37eac12c4712b6 272 Gene3D G3DSA:1.10.3720.10 5 260 9.8E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPTB_RS11755 fa44309a42341fee4ce3296e18590a4c 71 Pfam PF05433 Glycine zipper 2TM domain 34 70 5.6E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPTB_RS03810 b833ba7b181871873622463393d0e29c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.5E-24 T 22-04-2016 IPR020603 MraZ domain YPTB_RS03810 b833ba7b181871873622463393d0e29c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 142 1.5E-20 T 22-04-2016 IPR020603 MraZ domain YPTB_RS03810 b833ba7b181871873622463393d0e29c 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 8.0E-80 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YPTB_RS03810 b833ba7b181871873622463393d0e29c 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.15 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YPTB_RS03810 b833ba7b181871873622463393d0e29c 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 3.5E-64 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YPTB_RS03810 b833ba7b181871873622463393d0e29c 152 PANTHER PTHR34701 2 151 3.3E-68 T 22-04-2016 YPTB_RS03810 b833ba7b181871873622463393d0e29c 152 SUPERFAMILY SSF89447 1 138 4.5E-46 T 22-04-2016 YPTB_RS09645 362fa0cc175db4dbab6bcec35e3aa798 151 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 2.0E-44 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R YPTB_RS01900 47f1744901cbf7d24a937a8e5152d094 197 Pfam PF13327 Type III secretion system subunit 10 171 1.8E-64 T 22-04-2016 IPR025292 Type III secretion system protein YPTB_RS03060 afdc60484e7b824f9b3ef0f37459a31d 398 Pfam PF05987 Bacterial protein of unknown function (DUF898) 12 390 5.1E-101 T 22-04-2016 IPR010295 Protein of unknown function DUF898 YPTB_RS13330 3c8c3e826b9b647bccea1df2ab2736ad 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 127 2.0E-26 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 YPTB_RS02165 4ac842e583554f79fd0efd627fb41598 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 65 7.7E-29 T 22-04-2016 IPR014318 Phage shock protein, PspG YPTB_RS02165 4ac842e583554f79fd0efd627fb41598 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 3.6E-25 T 22-04-2016 IPR014318 Phage shock protein, PspG YPTB_RS07670 7e2a9cdefa0c6381f5968d3073e7562f 555 SUPERFAMILY SSF52540 1 203 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07670 7e2a9cdefa0c6381f5968d3073e7562f 555 SUPERFAMILY SSF52540 244 335 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07670 7e2a9cdefa0c6381f5968d3073e7562f 555 Pfam PF11398 Protein of unknown function (DUF2813) 1 377 2.7E-158 T 22-04-2016 IPR022602 Protein of unknown function DUF2813 YPTB_RS07670 7e2a9cdefa0c6381f5968d3073e7562f 555 Gene3D G3DSA:3.40.50.300 1 348 6.4E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB_RS07670 7e2a9cdefa0c6381f5968d3073e7562f 555 PANTHER PTHR32182 1 553 0.0 T 22-04-2016 YPTB_RS07670 7e2a9cdefa0c6381f5968d3073e7562f 555 PANTHER PTHR32182:SF12 1 553 0.0 T 22-04-2016 YPTB_RS03890 efcfaea5a6bbb755ad34cb82906497c3 174 Pfam PF05258 Protein of unknown function (DUF721) 26 98 1.2E-13 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 YPTB_RS09640 56e3811cfe5b7fb9a77982c437c5d1cc 149 Pfam PF05069 Phage virion morphogenesis family 3 147 9.5E-38 T 22-04-2016 IPR006522 Phage virion morphogensis protein YPTB_RS09640 56e3811cfe5b7fb9a77982c437c5d1cc 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 7 148 8.4E-42 T 22-04-2016 IPR006522 Phage virion morphogensis protein YPTB_RS13150 20940f7e851da2940206dbd176f66a2f 177 Pfam PF10777 Inner membrane protein YlaC 1 154 8.1E-72 T 22-04-2016 IPR019713 Inner membrane protein YlaC YPTB_RS18725 eb92f992ae501d9c367d08a5f164deba 65 Pfam PF16277 Domain of unknown function (DUF4926) 5 62 4.5E-22 T 22-04-2016 IPR032568 Protein of unknown function DUF4926 YPTB_RS17055 5fc81d3d625c31d013c379a8c6d4a036 100 Pfam PF04550 Phage holin family 2 2 89 1.2E-25 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin YPTB_RS17055 5fc81d3d625c31d013c379a8c6d4a036 100 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 26 91 3.0E-27 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin YPTB_RS03645 aed4c330a494f4b0ccb7e9c866d9aae4 205 Pfam PF12059 Protein of unknown function (DUF3540) 133 205 3.3E-13 T 22-04-2016 IPR021927 Protein of unknown function DUF3540 YPTB_RS03645 aed4c330a494f4b0ccb7e9c866d9aae4 205 Pfam PF12059 Protein of unknown function (DUF3540) 55 127 1.9E-10 T 22-04-2016 IPR021927 Protein of unknown function DUF3540 YPTB_RS05830 aac2205ddf8205ac483ef8ceb7a3bb8c 735 Pfam PF09925 Predicted membrane protein (DUF2157) 29 164 1.2E-27 T 22-04-2016 IPR018677 Domain of unknown function DUF2157 YPTB_RS05830 aac2205ddf8205ac483ef8ceb7a3bb8c 735 Pfam PF14351 Domain of unknown function (DUF4401) 394 724 7.3E-55 T 22-04-2016 IPR025513 Domain of unknown function DUF4401 YPTB_RS16815 d2bbed57a9e48ac14a7f3643b6cf05e9 106 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 95 1.9E-34 T 22-04-2016 IPR024476 Protein of unknown function DUF3861 YPTB_RS03225 13305fc02a3ccf82293b684c21807e17 110 Pfam PF07256 Protein of unknown function (DUF1435) 33 105 3.2E-31 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 YPTB_RS03225 13305fc02a3ccf82293b684c21807e17 110 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 32 86 8.0E-24 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 YPTB_RS14765 7c78d0f5ff5709dbdbaee615db7b0ac4 486 PANTHER PTHR11819 1 486 0.0 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPTB_RS14765 7c78d0f5ff5709dbdbaee615db7b0ac4 486 PANTHER PTHR11819:SF160 1 486 0.0 T 22-04-2016 YPTB_RS09650 c3992469f61ff86076679d3ddae87f9e 138 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 2 133 1.1E-46 T 22-04-2016 IPR020000 Bacteriophage P2, LysB YPTB_RS04795 dabba7abe4b79a1ea35d5e71528e2327 399 PANTHER PTHR23501:SF79 2 399 7.8E-219 T 22-04-2016 YPTB_RS04795 dabba7abe4b79a1ea35d5e71528e2327 399 PANTHER PTHR23501 2 399 7.8E-219 T 22-04-2016 YPTB_RS04795 dabba7abe4b79a1ea35d5e71528e2327 399 Pfam PF07690 Major Facilitator Superfamily 19 276 9.1E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPTB_RS04795 dabba7abe4b79a1ea35d5e71528e2327 399 Gene3D G3DSA:1.20.1250.20 219 389 9.4E-14 T 22-04-2016 YPTB_RS04795 dabba7abe4b79a1ea35d5e71528e2327 399 Gene3D G3DSA:1.20.1250.20 13 194 6.4E-26 T 22-04-2016 YPTB_RS04795 dabba7abe4b79a1ea35d5e71528e2327 399 SUPERFAMILY SSF103473 9 390 2.35E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPTB_RS17755 a81dbfc87a830c5b8288f2e444b9e7f4 163 Pfam PF15587 Immunity protein 9 15 162 7.7E-38 T 22-04-2016 IPR028963 Immunity protein 9 YPTB_RS11415 600ee7ff8004f50290f191e5727eb39b 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 83 1.4E-27 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 YPTB_RS10385 63e18cfcc6e7c15e16e7e2004bb500bb 284 Pfam PF08892 YqcI/YcgG family 171 246 5.3E-6 T 22-04-2016 IPR014988 Uncharacterised protein family, YqcI/YcgG YPTB_RS03350 15aa3bdb4df73834110726c17f80446f 207 Pfam PF13689 Domain of unknown function (DUF4154) 63 201 5.5E-33 T 22-04-2016 IPR025293 Protein of unknown function DUF4154 YPTB_RS14255 2307bc8db5bd4fc2c44c369136937f00 180 Pfam PF04315 Elongation factor P hydroxylase 11 169 4.6E-79 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- YPTB_RS17970 bd040b97ab39a3b0361e6d2e283d4838 365 Pfam PF02120 Flagellar hook-length control protein FliK 247 330 6.6E-20 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal YPTB_RS05725 1166f89c1b01b145da1791c91c840b95 60 PANTHER PTHR36154 1 58 1.5E-15 T 22-04-2016 YPTB_RS05725 1166f89c1b01b145da1791c91c840b95 60 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 55 7.6E-5 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) YPTB_RS00865 e34278c68bc4d83b4f8d3c383c34e49a 153 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 151 5.8E-64 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPTB_RS18650 7335a0f1cacbc798558d3f726e3231af 459 Pfam PF10091 Putative glucoamylase 257 410 1.7E-7 T 22-04-2016 IPR019282 Domain of unknown function DUF2329 YPTB_RS01270 8d6c31a4104b0f9724bb75abf31402f1 175 Pfam PF08786 Domain of unknown function (DUF1795) 41 171 3.1E-26 T 22-04-2016 IPR014894 Protein DcrB YPTB_RS09090 ed4ec6a9552f82fcc6c7b088ebeae1cc 85 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.122 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YPTB_RS09090 ed4ec6a9552f82fcc6c7b088ebeae1cc 85 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 5.0E-19 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YPTB_RS09090 ed4ec6a9552f82fcc6c7b088ebeae1cc 85 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 1.8E-27 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YPTB_RS06370 15e5ab29f637dab71eec903f7b18e5ea 44 Pfam PF08173 Membrane bound YbgT-like protein 1 27 8.5E-16 T 22-04-2016 IPR012994 Membrane bound YbgT-like YPTB_RS06370 15e5ab29f637dab71eec903f7b18e5ea 44 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 7.8E-20 T 22-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 YPTB_RS10230 b285b41f5d7866e6bb0a29cd39509b07 587 Pfam PF03237 Terminase-like family 164 570 1.2E-97 T 22-04-2016 IPR004921 Terminase, large subunit YPTB_RS10230 b285b41f5d7866e6bb0a29cd39509b07 587 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 64 2.0E-21 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 YPTB_RS08425 31c32425a69b724a1353f83634d8c2be 417 SUPERFAMILY SSF51004 137 318 3.66E-9 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YPTB_RS08425 31c32425a69b724a1353f83634d8c2be 417 SUPERFAMILY SSF51004 15 93 3.66E-9 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YPTB_RS08425 31c32425a69b724a1353f83634d8c2be 417 Pfam PF08309 LVIVD repeat 221 249 0.34 T 22-04-2016 IPR013211 LVIVD YPTB_RS07125 dab1ae4e1ea0714aac207c7794a06a98 238 PANTHER PTHR35191 1 100 5.5E-33 T 22-04-2016 YPTB_RS07520 75c82b9022afd1236d35c1e9dbb02cb8 161 Pfam PF10722 Putative bacterial sensory transduction regulator 9 132 1.4E-14 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN YPTB_RS09735 f5664c633dcb5c831ff40b267ad55c86 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 3.0E-61 T 22-04-2016 IPR009679 Bacteriophage 186, CII YPTB_RS10335 4378026d3958c378bf103a81a4d38154 75 Pfam PF03796 DnaB-like helicase C terminal domain 1 39 4.3E-5 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 YPTB_RS18020 f316890e399d445d36fa51f930897362 97 Pfam PF10135 Rod binding protein 42 93 1.0E-11 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal YPTB_RS00860 f9438e8173763d064428e144a12df65c 154 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 152 1.7E-62 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPTB_RS05465 cac745e1fc0fed30e3e68c46530bca4d 178 Pfam PF07445 Primosomal replication protein priC 9 175 8.5E-55 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC YPTB_RS15975 2dada48bf02ead2de30711120aef4765 121 Pfam PF06392 Acid shock protein repeat 47 67 3.8E-6 T 22-04-2016 IPR009435 Acid shock GO:0010447|GO:0042597 YPTB_RS15975 2dada48bf02ead2de30711120aef4765 121 Hamap MF_00546 Acid shock protein [asr]. 1 121 18.537 T 22-04-2016 IPR023497 Acid shock protein YPTB_RS17050 5bcea48139217fff91b31daa13e10c3d 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 1.0E-59 T 22-04-2016 IPR019708 Bacteriophage HP1, Orf24 YPTB_RS17530 b085637803aa71136cc3757548dacef5 40 Pfam PF12759 InsA C-terminal domain 1 37 2.2E-16 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTB_RS05400 a4f8073c8c55f445588e4fbcdb976b21 173 PANTHER PTHR38013 5 172 1.9E-56 T 22-04-2016 YPTB_RS05400 a4f8073c8c55f445588e4fbcdb976b21 173 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 49 152 2.8E-41 T 22-04-2016 YPTB_RS10445 fefeeb23480ada72de9c2fa1095aa5be 84 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 73 1.0E-23 T 22-04-2016 IPR006531 Gp5 N-terminal YPTB_RS10445 fefeeb23480ada72de9c2fa1095aa5be 84 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 73 5.2E-23 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 YPTB_RS16835 8ff71168119e822109b3622b976ebdba 255 Pfam PF11340 Protein of unknown function (DUF3142) 97 188 8.7E-15 T 22-04-2016 IPR021488 Protein of unknown function DUF3142 YPTB_RS03590 3ae9846a38b6e114b168de7d17d80d3f 337 PANTHER PTHR37951 1 337 9.3E-147 T 22-04-2016 YPTB_RS03590 3ae9846a38b6e114b168de7d17d80d3f 337 Pfam PF06812 ImpA, N-terminal, type VI secretion system 21 129 3.1E-12 T 22-04-2016 IPR010657 ImpA, N-terminal YPTB_RS03590 3ae9846a38b6e114b168de7d17d80d3f 337 PANTHER PTHR37951:SF1 1 337 9.3E-147 T 22-04-2016 YPTB_RS10890 337a682c39559e7759db4c7d6b9075c5 316 SUPERFAMILY SSF51182 27 204 6.52E-9 T 22-04-2016 IPR011051 RmlC-like cupin domain YPTB_RS15315 f8106f69e76126fb30230e0fd65a7a75 132 Pfam PF06836 Protein of unknown function (DUF1240) 38 132 1.0E-39 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPTB_RS12985 2131f33d8f4e441a4d982231b27e80cb 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 78 3.0E-39 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 YPTB_RS12985 2131f33d8f4e441a4d982231b27e80cb 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 9.5E-43 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 YPTB_RS15310 4264b18fb1a96b253a35df1c45d008dc 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 5.0E-40 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPTB_RS03310 a5a4adc6111358c8880a8ff9e68e2afc 233 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 1.9E-68 T 22-04-2016 IPR019305 Uncharacterised protein family Smp YPTB_RS18080 1e14d25456819286b7a4b4f9858d8e54 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 139 1.0E-26 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPTB_RS18080 1e14d25456819286b7a4b4f9858d8e54 145 Pfam PF02050 Flagellar FliJ protein 17 136 2.1E-7 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPTB_RS09765 e2d749f21158036d7af2a33ff82bf983 348 Pfam PF13271 Domain of unknown function (DUF4062) 6 87 3.0E-27 T 22-04-2016 IPR025139 Domain of unknown function DUF4062 YPTB_RS09660 d12d595241aae5162eadae232c3be38f 69 Pfam PF16080 Bacteriophage holin family HP1 2 52 2.2E-11 T 22-04-2016 IPR032118 Bacteriophage holin HP1 family YPTB_RS18880 9a9984f12ca0b965d107fb8eb7f83c02 94 Pfam PF13997 YqjK-like protein 13 85 3.5E-30 T 22-04-2016 IPR025612 YqjK-like protein YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 PANTHER PTHR30462:SF0 1 882 0.0 T 22-04-2016 YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 PANTHER PTHR30462 1 882 0.0 T 22-04-2016 YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 Pfam PF02470 MlaD protein 754 813 2.7E-8 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 Pfam PF02470 MlaD protein 46 137 1.5E-15 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 Pfam PF02470 MlaD protein 163 220 1.7E-6 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 Pfam PF02470 MlaD protein 395 452 4.0E-6 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 Pfam PF02470 MlaD protein 280 348 3.5E-6 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS12950 b31b89a2dd459d483ff89ea3b189c94e 883 Pfam PF02470 MlaD protein 641 729 2.6E-10 T 22-04-2016 IPR003399 Mce/MlaD YPTB_RS08935 9c7020ff8bfe6ef74d0c214c9179a29f 81 Pfam PF13269 Protein of unknown function (DUF4060) 3 75 2.6E-39 T 22-04-2016 IPR025135 Protein of unknown function DUF4060 YPTB_RS12250 7b044ad2d2377574f87c07ae70c5709e 64 Pfam PF13617 YnbE-like lipoprotein 10 62 6.6E-26 T 22-04-2016 IPR025985 YnbE-like lipoprotein YPTB_RS12250 7b044ad2d2377574f87c07ae70c5709e 64 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 18 64 8.0E-21 T 22-04-2016 YPTB_RS14555 49423a40c1fd789f4b64f0575bd577f1 282 Pfam PF13988 Protein of unknown function (DUF4225) 91 255 6.9E-57 T 22-04-2016 IPR025320 Protein of unknown function DUF4225 YPTB_RS09610 3074e24329b663eaf972859f4eced0ee 160 Pfam PF16778 Phage tail assembly chaperone protein 77 139 1.5E-6 T 22-04-2016 IPR031893 Phage tail assembly chaperone protein YPTB_RS10185 cbdd8b6e99d0b8f5934404984df4a8f6 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 9 136 1.5E-48 T 22-04-2016 IPR020000 Bacteriophage P2, LysB YPTB_RS08710 e969e48a271dfac6e1156e49a4f0617a 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 3.7E-57 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 YPTB_RS11600 7ebbf9a1e865175791d1bcd23feff099 256 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 1.6E-101 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 YPTB_RS11600 7ebbf9a1e865175791d1bcd23feff099 256 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 250 24.547 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 YPTB_RS16540 537554a14711f65412ae73b68c804fdb 121 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 16 118 2.2E-20 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPTB_RS13365 6a8eca035bfdcf8e359eff8a09dab60c 390 Pfam PF14130 Domain of unknown function (DUF4297) 10 207 2.6E-17 T 22-04-2016 IPR025382 Domain of unknown function DUF4297 YPTB_RS18875 2f1a6977d911fc016aa8da3b0fa16fe6 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 1.3E-20 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YPTB_RS21245 e47ece98c025850b4e4e2f874e10e13f 193 Pfam PF13988 Protein of unknown function (DUF4225) 2 161 1.4E-59 T 22-04-2016 IPR025320 Protein of unknown function DUF4225 YPTB_RS18150 8bc0d3118bba9dbc344150d804e8c881 189 Pfam PF11153 Protein of unknown function (DUF2931) 9 188 5.1E-39 T 22-04-2016 IPR021326 Protein of unknown function DUF2931 YPTB_RS05460 3ea94065115fd7e6a8e6aebc948fd956 51 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 2.3E-23 T 22-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related YPTB_RS04415 3f488f48da8bbc3a084ae60b9b608e06 83 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 61 1.4E-23 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system YPTB_RS16855 8db1be686858ae1d975e1d6a994987ba 64 Pfam PF14206 Cysteine-rich CPCC 5 59 8.7E-20 T 22-04-2016 IPR025983 Cysteine-rich CPCC domain YPTB_RS10120 a1f7311a212a9987a920657b5e41443d 84 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 3 72 1.0E-7 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative YPTB_RS10425 266c87c56382ac6ee9843d200088c21d 101 Pfam PF10908 Protein of unknown function (DUF2778) 10 82 8.8E-23 T 22-04-2016 IPR021225 Protein of unknown function DUF2778 YPTB_RS20530 91c236cf86c7ba36c64cf25191559c4b 76 PANTHER PTHR34319 2 76 2.6E-36 T 22-04-2016 YPTB_RS07075 b280376cd13dd29660634f55a98231d7 99 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 88 1.4E-15 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative YPTB_RS15750 ad8ea47039d46715114b18f06d1a3a12 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 5.5E-35 T 22-04-2016 IPR019663 Uncharacterised protein YbfA