##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2008v1 #!genome-build-accession NCBI_Assembly:GCF_000020085.1 ##sequence-region NC_010634.1 1 4695619 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=502801 NC_010634.1 RefSeq region 1 4695619 . + . ID=id0;Dbxref=taxon:502801;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=PB1/+ NC_010634.1 RefSeq gene 1 1389 . + . ID=gene0;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YPTS_RS00005;old_locus_tag=YPTS_0001 NC_010634.1 Protein Homology CDS 1 1389 . + 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_002220732.1;Name=WP_002220732.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 NC_010634.1 RefSeq gene 1394 2494 . + . ID=gene1;Name=YPTS_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00010;old_locus_tag=YPTS_0002 NC_010634.1 Protein Homology CDS 1394 2494 . + 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_002209645.1;Name=WP_002209645.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11 NC_010634.1 RefSeq gene 2498 2668 . - . ID=gene2;Name=YPTS_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00015 NC_010634.1 Protein Homology CDS 2498 2668 . - 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;product=recombinase F;protein_id=WP_002218418.1;transl_table=11 NC_010634.1 RefSeq gene 2667 3752 . + . ID=gene3;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YPTS_RS00020;old_locus_tag=YPTS_0003 NC_010634.1 Protein Homology CDS 2667 3752 . + 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_012413397.1;Name=WP_012413397.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_012413397.1;transl_table=11 NC_010634.1 RefSeq gene 3772 6186 . + . ID=gene4;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YPTS_RS00025;old_locus_tag=YPTS_0004 NC_010634.1 Protein Homology CDS 3772 6186 . + 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11 NC_010634.1 RefSeq gene 6402 7211 . + . ID=gene5;Name=YPTS_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00030;old_locus_tag=YPTS_0005 NC_010634.1 Protein Homology CDS 6402 7211 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_011193349.1;Name=WP_011193349.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_011193349.1;transl_table=11 NC_010634.1 RefSeq repeat_region 7558 9477 . + . ID=id1;gbkey=repeat_region NC_010634.1 RefSeq gene 7824 8339 . + . ID=gene6;Name=YPTS_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00035;old_locus_tag=YPTS_0006 NC_010634.1 Protein Homology CDS 7824 8339 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_010634.1 RefSeq gene 8393 9178 . + . ID=gene7;Name=YPTS_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00040;old_locus_tag=YPTS_0007 NC_010634.1 Protein Homology CDS 8393 9178 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_010634.1 RefSeq gene 9737 10966 . + . ID=gene8;Name=YPTS_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00045;old_locus_tag=YPTS_0009 NC_010634.1 Protein Homology CDS 9737 10966 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_002215753.1;transl_table=11 NC_010634.1 RefSeq gene 11115 11318 . - . ID=gene9;Name=YPTS_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00050;old_locus_tag=YPTS_0010 NC_010634.1 Protein Homology CDS 11115 11318 . - 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11 NC_010634.1 RefSeq gene 11439 11597 . + . ID=gene10;Name=YPTS_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00055;old_locus_tag=YPTS_0011 NC_010634.1 Protein Homology CDS 11439 11597 . + 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NC_010634.1 RefSeq gene 11676 12257 . + . ID=gene11;Name=YPTS_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00060;old_locus_tag=YPTS_0012 NC_010634.1 Protein Homology CDS 11676 12257 . + 0 ID=cds11;Parent=gene11;Dbxref=Genbank:WP_011193347.1;Name=WP_011193347.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193347.1;transl_table=11 NC_010634.1 RefSeq gene 12271 12456 . - . ID=gene12;Name=YPTS_RS00065;end_range=12456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS00065;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 12271 12456 . - 0 ID=cds12;Parent=gene12;end_range=12456,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 12453 13770 . + . ID=id2;gbkey=repeat_region NC_010634.1 RefSeq gene 12526 13713 . + . ID=gene13;Name=YPTS_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00070;old_locus_tag=YPTS_0013 NC_010634.1 Protein Homology CDS 12526 13713 . + 0 ID=cds13;Parent=gene13;Dbxref=Genbank:WP_011191442.1;Name=WP_011191442.1;gbkey=CDS;product=transposase;protein_id=WP_011191442.1;transl_table=11 NC_010634.1 RefSeq gene 13793 14323 . - . ID=gene14;Name=YPTS_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00075;old_locus_tag=YPTS_0014 NC_010634.1 Protein Homology CDS 13793 14323 . - 0 ID=cds14;Parent=gene14;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11 NC_010634.1 RefSeq gene 14323 14910 . - . ID=gene15;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YPTS_RS00080;old_locus_tag=YPTS_0015 NC_010634.1 Protein Homology CDS 14323 14910 . - 0 ID=cds15;Parent=gene15;Dbxref=Genbank:WP_002213171.1;Name=WP_002213171.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdenum cofactor guanylyltransferase;protein_id=WP_002213171.1;transl_table=11 NC_010634.1 RefSeq gene 15064 15333 . + . ID=gene16;Name=YPTS_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00085;old_locus_tag=YPTS_0016 NC_010634.1 Protein Homology CDS 15064 15333 . + 0 ID=cds16;Parent=gene16;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11 NC_010634.1 RefSeq gene 15424 16410 . + . ID=gene17;Name=YPTS_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00090;old_locus_tag=YPTS_0017 NC_010634.1 Protein Homology CDS 15424 16410 . + 0 ID=cds17;Parent=gene17;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NC_010634.1 RefSeq gene 16438 17061 . + . ID=gene18;Name=YPTS_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00095;old_locus_tag=YPTS_0018 NC_010634.1 Protein Homology CDS 16438 17061 . + 0 ID=cds18;Parent=gene18;Dbxref=Genbank:WP_002213168.1;Name=WP_002213168.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NC_010634.1 RefSeq gene 17552 20350 . + . ID=gene19;Name=YPTS_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00100;old_locus_tag=YPTS_0019 NC_010634.1 Protein Homology CDS 17552 20350 . + 0 ID=cds19;Parent=gene19;Dbxref=Genbank:WP_011191443.1;Name=WP_011191443.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_011191443.1;transl_table=11 NC_010634.1 RefSeq gene 20758 21408 . - . ID=gene20;Name=YPTS_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00105;old_locus_tag=YPTS_0020 NC_010634.1 Protein Homology CDS 20758 21408 . - 0 ID=cds20;Parent=gene20;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11 NC_010634.1 RefSeq gene 22153 22719 . + . ID=gene21;Name=YPTS_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00110;old_locus_tag=YPTS_0021 NC_010634.1 Protein Homology CDS 22153 22719 . + 0 ID=cds21;Parent=gene21;Dbxref=Genbank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NC_010634.1 RefSeq gene 22906 24279 . + . ID=gene22;Name=YPTS_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00115;old_locus_tag=YPTS_0022 NC_010634.1 Protein Homology CDS 22906 24279 . + 0 ID=cds22;Parent=gene22;Dbxref=Genbank:WP_002213155.1;Name=WP_002213155.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NC_010634.1 RefSeq gene 24333 25745 . - . ID=gene23;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YPTS_RS00120;old_locus_tag=YPTS_0023 NC_010634.1 Protein Homology CDS 24333 25745 . - 0 ID=cds23;Parent=gene23;Dbxref=Genbank:WP_011191444.1;Name=WP_011191444.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_011191444.1;transl_table=11 NC_010634.1 RefSeq gene 25753 26802 . - . ID=gene24;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YPTS_RS00125;old_locus_tag=YPTS_0024 NC_010634.1 Protein Homology CDS 25753 26802 . - 0 ID=cds24;Parent=gene24;Dbxref=Genbank:WP_002213151.1;Name=WP_002213151.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_002213151.1;transl_table=11 NC_010634.1 RefSeq gene 27055 28464 . - . ID=gene25;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YPTS_RS00130;old_locus_tag=YPTS_0025 NC_010634.1 Protein Homology CDS 27055 28464 . - 0 ID=cds25;Parent=gene25;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11 NC_010634.1 RefSeq gene 28650 28781 . - . ID=gene26;Name=YPTS_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00135 NC_010634.1 Protein Homology CDS 28650 28781 . - 0 ID=cds26;Parent=gene26;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11 NC_010634.1 RefSeq gene 29027 30850 . + . ID=gene27;Name=YPTS_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00140;old_locus_tag=YPTS_0026 NC_010634.1 Protein Homology CDS 29027 30850 . + 0 ID=cds27;Parent=gene27;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11 NC_010634.1 RefSeq gene 31172 31762 . + . ID=gene28;Name=YPTS_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00145;old_locus_tag=YPTS_0027 NC_010634.1 Protein Homology CDS 31172 31762 . + 0 ID=cds28;Parent=gene28;Dbxref=Genbank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;product=phosphatase;protein_id=WP_002209011.1;transl_table=11 NC_010634.1 RefSeq gene 31859 32743 . + . ID=gene29;Name=YPTS_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00150;old_locus_tag=YPTS_0028 NC_010634.1 Protein Homology CDS 31859 32743 . + 0 ID=cds29;Parent=gene29;Dbxref=Genbank:WP_012413399.1;Name=WP_012413399.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413399.1;transl_table=11 NC_010634.1 RefSeq gene 32750 33187 . + . ID=gene30;Name=YPTS_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00155;old_locus_tag=YPTS_0029 NC_010634.1 Protein Homology CDS 32750 33187 . + 0 ID=cds30;Parent=gene30;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NC_010634.1 RefSeq gene 33373 34296 . + . ID=gene31;Name=YPTS_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00160;old_locus_tag=YPTS_0030 NC_010634.1 Protein Homology CDS 33373 34296 . + 0 ID=cds31;Parent=gene31;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11 NC_010634.1 RefSeq gene 34431 36140 . - . ID=gene32;Name=YPTS_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00165;old_locus_tag=YPTS_0031 NC_010634.1 Protein Homology CDS 34431 36140 . - 0 ID=cds32;Parent=gene32;Dbxref=Genbank:WP_012413400.1;Name=WP_012413400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413400.1;transl_table=11 NC_010634.1 RefSeq gene 36287 37672 . - . ID=gene33;Name=YPTS_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00170;old_locus_tag=YPTS_0032 NC_010634.1 Protein Homology CDS 36287 37672 . - 0 ID=cds33;Parent=gene33;Dbxref=Genbank:WP_011191446.1;Name=WP_011191446.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease;protein_id=WP_011191446.1;transl_table=11 NC_010634.1 RefSeq gene 37910 39124 . + . ID=gene34;Name=YPTS_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00175;old_locus_tag=YPTS_0033 NC_010634.1 Protein Homology CDS 37910 39124 . + 0 ID=cds34;Parent=gene34;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11 NC_010634.1 RefSeq repeat_region 39222 39401 . + . ID=id3;gbkey=repeat_region NC_010634.1 RefSeq gene 39490 41571 . - . ID=gene35;Name=YPTS_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00180;old_locus_tag=YPTS_0034 NC_010634.1 Protein Homology CDS 39490 41571 . - 0 ID=cds35;Parent=gene35;Dbxref=Genbank:WP_002209004.1;Name=WP_002209004.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NC_010634.1 RefSeq gene 41572 42231 . - . ID=gene36;Name=YPTS_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00185;old_locus_tag=YPTS_0035 NC_010634.1 Protein Homology CDS 41572 42231 . - 0 ID=cds36;Parent=gene36;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11 NC_010634.1 RefSeq gene 42270 44378 . - . ID=gene37;Name=YPTS_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00190;old_locus_tag=YPTS_0036 NC_010634.1 Protein Homology CDS 42270 44378 . - 0 ID=cds37;Parent=gene37;Dbxref=Genbank:WP_002209002.1;Name=WP_002209002.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NC_010634.1 RefSeq gene 44398 44673 . - . ID=gene38;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YPTS_RS00195;old_locus_tag=YPTS_0037 NC_010634.1 Protein Homology CDS 44398 44673 . - 0 ID=cds38;Parent=gene38;Dbxref=Genbank:WP_004392061.1;Name=WP_004392061.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004392061.1;transl_table=11 NC_010634.1 RefSeq gene 44728 45351 . - . ID=gene39;Name=YPTS_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00200;old_locus_tag=YPTS_0038 NC_010634.1 Protein Homology CDS 44728 45351 . - 0 ID=cds39;Parent=gene39;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NC_010634.1 RefSeq gene 45752 47455 . + . ID=gene40;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=YPTS_RS00205;old_locus_tag=YPTS_0039 NC_010634.1 Protein Homology CDS 45752 47455 . + 0 ID=cds40;Parent=gene40;Dbxref=Genbank:WP_011191447.1;Name=WP_011191447.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_011191447.1;transl_table=11 NC_010634.1 RefSeq gene 47475 48092 . - . ID=gene41;Name=YPTS_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00210;old_locus_tag=YPTS_0040 NC_010634.1 Protein Homology CDS 47475 48092 . - 0 ID=cds41;Parent=gene41;Dbxref=Genbank:WP_012413402.1;Name=WP_012413402.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413402.1;transl_table=11 NC_010634.1 RefSeq gene 48613 49476 . - . ID=gene42;Name=YPTS_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00215;old_locus_tag=YPTS_0042 NC_010634.1 Protein Homology CDS 48613 49476 . - 0 ID=cds42;Parent=gene42;Dbxref=Genbank:WP_002208998.1;Name=WP_002208998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208998.1;transl_table=11 NC_010634.1 RefSeq gene 49603 50319 . + . ID=gene43;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YPTS_RS00220;old_locus_tag=YPTS_0043 NC_010634.1 Protein Homology CDS 49603 50319 . + 0 ID=cds43;Parent=gene43;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NC_010634.1 RefSeq gene 50486 51133 . + . ID=gene44;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YPTS_RS00225;old_locus_tag=YPTS_0044 NC_010634.1 Protein Homology CDS 50486 51133 . + 0 ID=cds44;Parent=gene44;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NC_010634.1 RefSeq gene 51268 51864 . - . ID=gene45;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=YPTS_RS00230;old_locus_tag=YPTS_0045 NC_010634.1 Protein Homology CDS 51268 51864 . - 0 ID=cds45;Parent=gene45;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NC_010634.1 RefSeq gene 51986 52444 . - . ID=gene46;Name=YPTS_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00235;old_locus_tag=YPTS_0046 NC_010634.1 Protein Homology CDS 51986 52444 . - 0 ID=cds46;Parent=gene46;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11 NC_010634.1 RefSeq gene 52422 53639 . - . ID=gene47;Name=YPTS_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00240;old_locus_tag=YPTS_0047 NC_010634.1 Protein Homology CDS 52422 53639 . - 0 ID=cds47;Parent=gene47;Dbxref=Genbank:WP_002208993.1;Name=WP_002208993.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002208993.1;transl_table=11 NC_010634.1 RefSeq gene 53833 54501 . + . ID=gene48;Name=YPTS_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00245;old_locus_tag=YPTS_0048 NC_010634.1 Protein Homology CDS 53833 54501 . + 0 ID=cds48;Parent=gene48;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11 NC_010634.1 RefSeq gene 54764 55000 . + . ID=gene49;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YPTS_RS00250;old_locus_tag=YPTS_0049 NC_010634.1 Protein Homology CDS 54764 55000 . + 0 ID=cds49;Parent=gene49;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NC_010634.1 RefSeq gene 55012 55179 . + . ID=gene50;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YPTS_RS00255;old_locus_tag=YPTS_0050 NC_010634.1 Protein Homology CDS 55012 55179 . + 0 ID=cds50;Parent=gene50;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NC_010634.1 RefSeq gene 55262 56071 . + . ID=gene51;Name=YPTS_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00260;old_locus_tag=YPTS_0051 NC_010634.1 Protein Homology CDS 55262 56071 . + 0 ID=cds51;Parent=gene51;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11 NC_010634.1 RefSeq gene 56077 56556 . - . ID=gene52;Name=YPTS_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00265;old_locus_tag=YPTS_0052 NC_010634.1 Protein Homology CDS 56077 56556 . - 0 ID=cds52;Parent=gene52;Dbxref=Genbank:WP_012104267.1;Name=WP_012104267.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_012104267.1;transl_table=11 NC_010634.1 RefSeq gene 56553 57335 . - . ID=gene53;Name=YPTS_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00270;old_locus_tag=YPTS_0053 NC_010634.1 Protein Homology CDS 56553 57335 . - 0 ID=cds53;Parent=gene53;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11 NC_010634.1 RefSeq gene 57336 58613 . - . ID=gene54;Name=YPTS_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00275;old_locus_tag=YPTS_0054 NC_010634.1 Protein Homology CDS 57336 58613 . - 0 ID=cds54;Parent=gene54;Dbxref=Genbank:WP_002208986.1;Name=WP_002208986.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NC_010634.1 RefSeq gene 59033 59998 . - . ID=gene55;Name=YPTS_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00280;old_locus_tag=YPTS_0055 NC_010634.1 Protein Homology CDS 59033 59998 . - 0 ID=cds55;Parent=gene55;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11 NC_010634.1 RefSeq gene 59998 61062 . - . ID=gene56;Name=YPTS_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00285;old_locus_tag=YPTS_0056 NC_010634.1 Protein Homology CDS 59998 61062 . - 0 ID=cds56;Parent=gene56;Dbxref=Genbank:WP_011191450.1;Name=WP_011191450.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_011191450.1;transl_table=11 NC_010634.1 RefSeq gene 61093 62025 . - . ID=gene57;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YPTS_RS00290;old_locus_tag=YPTS_0057 NC_010634.1 Protein Homology CDS 61093 62025 . - 0 ID=cds57;Parent=gene57;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11 NC_010634.1 RefSeq gene 62271 63482 . + . ID=gene58;Name=YPTS_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00295;old_locus_tag=YPTS_0058 NC_010634.1 Protein Homology CDS 62271 63482 . + 0 ID=cds58;Parent=gene58;Dbxref=Genbank:WP_002208982.1;Name=WP_002208982.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_002208982.1;transl_table=11 NC_010634.1 RefSeq gene 63492 64517 . + . ID=gene59;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YPTS_RS00300;old_locus_tag=YPTS_0059 NC_010634.1 Protein Homology CDS 63492 64517 . + 0 ID=cds59;Parent=gene59;Dbxref=Genbank:WP_011191451.1;Name=WP_011191451.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_011191451.1;transl_table=11 NC_010634.1 RefSeq gene 64655 65665 . - . ID=gene60;Name=YPTS_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00305;old_locus_tag=YPTS_0060 NC_010634.1 Protein Homology CDS 64655 65665 . - 0 ID=cds60;Parent=gene60;Dbxref=Genbank:WP_011191452.1;Name=WP_011191452.1;gbkey=CDS;product=sugar deacetylase;protein_id=WP_011191452.1;transl_table=11 NC_010634.1 RefSeq gene 65689 67059 . - . ID=gene61;Name=YPTS_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00310;old_locus_tag=YPTS_0061 NC_010634.1 Protein Homology CDS 65689 67059 . - 0 ID=cds61;Parent=gene61;Dbxref=Genbank:WP_002208980.1;Name=WP_002208980.1;gbkey=CDS;product=peptidase M37;protein_id=WP_002208980.1;transl_table=11 NC_010634.1 RefSeq gene 67069 68616 . - . ID=gene62;Name=YPTS_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00315;old_locus_tag=YPTS_0062 NC_010634.1 Protein Homology CDS 67069 68616 . - 0 ID=cds62;Parent=gene62;Dbxref=Genbank:WP_011191453.1;Name=WP_011191453.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_011191453.1;transl_table=11 NC_010634.1 RefSeq gene 69014 69448 . + . ID=gene63;Name=YPTS_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00320;old_locus_tag=YPTS_0063 NC_010634.1 Protein Homology CDS 69014 69448 . + 0 ID=cds63;Parent=gene63;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11 NC_010634.1 RefSeq gene 69567 69815 . + . ID=gene64;Name=YPTS_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00325;old_locus_tag=YPTS_0064 NC_010634.1 Protein Homology CDS 69567 69815 . + 0 ID=cds64;Parent=gene64;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11 NC_010634.1 RefSeq gene 69903 70379 . + . ID=gene65;Name=YPTS_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00330;old_locus_tag=YPTS_0065 NC_010634.1 Protein Homology CDS 69903 70379 . + 0 ID=cds65;Parent=gene65;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11 NC_010634.1 RefSeq gene 70379 71398 . + . ID=gene66;Name=YPTS_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00335;old_locus_tag=YPTS_0066 NC_010634.1 Protein Homology CDS 70379 71398 . + 0 ID=cds66;Parent=gene66;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11 NC_010634.1 RefSeq gene 71458 71598 . + . ID=gene67;Name=YPTS_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00340 NC_010634.1 Protein Homology CDS 71458 71598 . + 0 ID=cds67;Parent=gene67;Dbxref=Genbank:WP_011191454.1;Name=WP_011191454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191454.1;transl_table=11 NC_010634.1 RefSeq gene 71664 72485 . + . ID=gene68;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YPTS_RS00345;old_locus_tag=YPTS_0067 NC_010634.1 Protein Homology CDS 71664 72485 . + 0 ID=cds68;Parent=gene68;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NC_010634.1 RefSeq gene 72608 73096 . - . ID=gene69;Name=YPTS_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00350;old_locus_tag=YPTS_0068 NC_010634.1 Protein Homology CDS 72608 73096 . - 0 ID=cds69;Parent=gene69;Dbxref=Genbank:WP_011191455.1;Name=WP_011191455.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=rRNA methyltransferase;protein_id=WP_011191455.1;transl_table=11 NC_010634.1 RefSeq gene 73285 74349 . + . ID=gene70;Name=YPTS_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00355;old_locus_tag=YPTS_0069 NC_010634.1 Protein Homology CDS 73285 74349 . + 0 ID=cds70;Parent=gene70;Dbxref=Genbank:WP_012413404.1;Name=WP_012413404.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_012413404.1;transl_table=11 NC_010634.1 RefSeq gene 74417 75793 . - . ID=gene71;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YPTS_RS00360;old_locus_tag=YPTS_0070 NC_010634.1 Protein Homology CDS 74417 75793 . - 0 ID=cds71;Parent=gene71;Dbxref=Genbank:WP_002208971.1;Name=WP_002208971.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_002208971.1;transl_table=11 NC_010634.1 RefSeq gene 75790 76488 . - . ID=gene72;Name=YPTS_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00365;old_locus_tag=YPTS_0071 NC_010634.1 Protein Homology CDS 75790 76488 . - 0 ID=cds72;Parent=gene72;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11 NC_010634.1 RefSeq gene 76662 77150 . + . ID=gene73;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YPTS_RS00370;old_locus_tag=YPTS_0072 NC_010634.1 Protein Homology CDS 76662 77150 . + 0 ID=cds73;Parent=gene73;Dbxref=Genbank:WP_011191457.1;Name=WP_011191457.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_011191457.1;transl_table=11 NC_010634.1 RefSeq gene 77828 78787 . + . ID=gene74;Name=YPTS_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00375;old_locus_tag=YPTS_0074 NC_010634.1 Protein Homology CDS 77828 78787 . + 0 ID=cds74;Parent=gene74;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11 NC_010634.1 RefSeq gene 79349 80251 . + . ID=gene75;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=YPTS_RS00380;old_locus_tag=YPTS_0076 NC_010634.1 Protein Homology CDS 79349 80251 . + 0 ID=cds75;Parent=gene75;Dbxref=Genbank:WP_002208967.1;Name=WP_002208967.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=cation-efflux pump FieF;protein_id=WP_002208967.1;transl_table=11 NC_010634.1 RefSeq gene 80469 81452 . + . ID=gene76;Name=YPTS_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00385;old_locus_tag=YPTS_0077 NC_010634.1 Protein Homology CDS 80469 81452 . + 0 ID=cds76;Parent=gene76;Dbxref=Genbank:WP_011191458.1;Name=WP_011191458.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_011191458.1;transl_table=11 NC_010634.1 RefSeq gene 81673 82662 . + . ID=gene77;Name=YPTS_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00390;old_locus_tag=YPTS_0078 NC_010634.1 Protein Homology CDS 81673 82662 . + 0 ID=cds77;Parent=gene77;Dbxref=Genbank:WP_012304757.1;Name=WP_012304757.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_012304757.1;transl_table=11 NC_010634.1 RefSeq gene 82912 83571 . - . ID=gene78;Name=YPTS_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00395;old_locus_tag=YPTS_0080 NC_010634.1 Protein Homology CDS 82912 83571 . - 0 ID=cds78;Parent=gene78;Dbxref=Genbank:WP_032466594.1;Name=WP_032466594.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_032466594.1;transl_table=11 NC_010634.1 RefSeq gene 83806 85233 . - . ID=gene79;Name=YPTS_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00400;old_locus_tag=YPTS_0081 NC_010634.1 Protein Homology CDS 83806 85233 . - 0 ID=cds79;Parent=gene79;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11 NC_010634.1 RefSeq gene 85299 86012 . - . ID=gene80;Name=YPTS_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00405;old_locus_tag=YPTS_0082 NC_010634.1 Protein Homology CDS 85299 86012 . - 0 ID=cds80;Parent=gene80;Dbxref=Genbank:WP_002208962.1;Name=WP_002208962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208962.1;transl_table=11 NC_010634.1 RefSeq gene 86009 86746 . - . ID=gene81;Name=YPTS_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00410;old_locus_tag=YPTS_0083 NC_010634.1 Protein Homology CDS 86009 86746 . - 0 ID=cds81;Parent=gene81;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11 NC_010634.1 RefSeq gene 86883 88118 . + . ID=gene82;Name=YPTS_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00415;old_locus_tag=YPTS_0084 NC_010634.1 Protein Homology CDS 86883 88118 . + 0 ID=cds82;Parent=gene82;Dbxref=Genbank:WP_011191461.1;Name=WP_011191461.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011191461.1;transl_table=11 NC_010634.1 RefSeq gene 88349 89116 . - . ID=gene83;Name=YPTS_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00420;old_locus_tag=YPTS_0085 NC_010634.1 Protein Homology CDS 88349 89116 . - 0 ID=cds83;Parent=gene83;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NC_010634.1 RefSeq gene 89245 89880 . - . ID=gene84;Name=YPTS_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00425;old_locus_tag=YPTS_0086 NC_010634.1 Protein Homology CDS 89245 89880 . - 0 ID=cds84;Parent=gene84;Dbxref=Genbank:WP_011191462.1;Name=WP_011191462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191462.1;transl_table=11 NC_010634.1 RefSeq gene 90028 90462 . + . ID=gene85;Name=YPTS_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00430;old_locus_tag=YPTS_0087 NC_010634.1 Protein Homology CDS 90028 90462 . + 0 ID=cds85;Parent=gene85;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11 NC_010634.1 RefSeq gene 90803 91549 . - . ID=gene86;Name=YPTS_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00435;old_locus_tag=YPTS_0088 NC_010634.1 Protein Homology CDS 90803 91549 . - 0 ID=cds86;Parent=gene86;Dbxref=Genbank:WP_002208956.1;Name=WP_002208956.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_002208956.1;transl_table=11 NC_010634.1 RefSeq gene 91704 92714 . - . ID=gene87;Name=YPTS_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00440;old_locus_tag=YPTS_0089 NC_010634.1 Protein Homology CDS 91704 92714 . - 0 ID=cds87;Parent=gene87;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NC_010634.1 RefSeq gene 92967 94490 . - . ID=gene88;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YPTS_RS00445;old_locus_tag=YPTS_0090 NC_010634.1 Protein Homology CDS 92967 94490 . - 0 ID=cds88;Parent=gene88;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11 NC_010634.1 RefSeq gene 94667 95515 . - . ID=gene89;Name=YPTS_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00450;old_locus_tag=YPTS_0091 NC_010634.1 Protein Homology CDS 94667 95515 . - 0 ID=cds89;Parent=gene89;Dbxref=Genbank:WP_002208954.1;Name=WP_002208954.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_002208954.1;transl_table=11 NC_010634.1 RefSeq gene 95525 95764 . - . ID=gene90;Name=YPTS_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00455 NC_010634.1 Protein Homology CDS 95525 95764 . - 0 ID=cds90;Parent=gene90;Dbxref=Genbank:WP_002215868.1;Name=WP_002215868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215868.1;transl_table=11 NC_010634.1 RefSeq gene 96159 96398 . + . ID=gene91;Name=YPTS_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00460;old_locus_tag=YPTS_0092 NC_010634.1 Protein Homology CDS 96159 96398 . + 0 ID=cds91;Parent=gene91;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11 NC_010634.1 RefSeq gene 96746 98860 . - . ID=gene92;Name=YPTS_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00465;old_locus_tag=YPTS_0093 NC_010634.1 Protein Homology CDS 96746 98860 . - 0 ID=cds92;Parent=gene92;Dbxref=Genbank:WP_011191463.1;Name=WP_011191463.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_011191463.1;transl_table=11 NC_010634.1 RefSeq gene 98853 100145 . - . ID=gene93;Name=YPTS_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00470;old_locus_tag=YPTS_0094 NC_010634.1 Protein Homology CDS 98853 100145 . - 0 ID=cds93;Parent=gene93;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11 NC_010634.1 RefSeq gene 100358 100597 . + . ID=gene94;Name=YPTS_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00475;old_locus_tag=YPTS_0095 NC_010634.1 Protein Homology CDS 100358 100597 . + 0 ID=cds94;Parent=gene94;Dbxref=Genbank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NC_010634.1 RefSeq gene 100772 100921 . + . ID=gene95;Name=YPTS_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00480 NC_010634.1 Protein Homology CDS 100772 100921 . + 0 ID=cds95;Parent=gene95;Dbxref=Genbank:WP_002208947.1;Name=WP_002208947.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208947.1;transl_table=11 NC_010634.1 RefSeq gene 101227 101811 . + . ID=gene96;Name=YPTS_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00485;old_locus_tag=YPTS_0096 NC_010634.1 Protein Homology CDS 101227 101811 . + 0 ID=cds96;Parent=gene96;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11 NC_010634.1 RefSeq gene 101928 102413 . - . ID=gene97;Name=YPTS_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00490;old_locus_tag=YPTS_0097 NC_010634.1 Protein Homology CDS 101928 102413 . - 0 ID=cds97;Parent=gene97;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=ribonuclease E activity regulator RraA;protein_id=WP_002208945.1;transl_table=11 NC_010634.1 RefSeq gene 102555 103472 . - . ID=gene98;Name=YPTS_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00495;old_locus_tag=YPTS_0098 NC_010634.1 Protein Homology CDS 102555 103472 . - 0 ID=cds98;Parent=gene98;Dbxref=Genbank:WP_011191464.1;Name=WP_011191464.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_011191464.1;transl_table=11 NC_010634.1 RefSeq gene 103707 105038 . - . ID=gene99;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YPTS_RS00500;old_locus_tag=YPTS_0099 NC_010634.1 Protein Homology CDS 103707 105038 . - 0 ID=cds99;Parent=gene99;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NC_010634.1 RefSeq gene 105109 105633 . - . ID=gene100;Name=YPTS_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00505;old_locus_tag=YPTS_0100 NC_010634.1 Protein Homology CDS 105109 105633 . - 0 ID=cds100;Parent=gene100;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NC_010634.1 RefSeq gene 105733 106578 . - . ID=gene101;Name=YPTS_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00510;old_locus_tag=YPTS_0101 NC_010634.1 Protein Homology CDS 105733 106578 . - 0 ID=cds101;Parent=gene101;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NC_010634.1 RefSeq gene 106644 107672 . - . ID=gene102;Name=YPTS_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00515;old_locus_tag=YPTS_0102 NC_010634.1 Protein Homology CDS 106644 107672 . - 0 ID=cds102;Parent=gene102;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11 NC_010634.1 RefSeq gene 107795 107938 . - . ID=gene103;Name=YPTS_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00520;old_locus_tag=YPTS_0103 NC_010634.1 Protein Homology CDS 107795 107938 . - 0 ID=cds103;Parent=gene103;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11 NC_010634.1 RefSeq gene 108025 110223 . - . ID=gene104;Name=YPTS_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00525;old_locus_tag=YPTS_0104 NC_010634.1 Protein Homology CDS 108025 110223 . - 0 ID=cds104;Parent=gene104;Dbxref=Genbank:WP_011191465.1;Name=WP_011191465.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_011191465.1;transl_table=11 NC_010634.1 RefSeq gene 110476 110691 . + . ID=gene105;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YPTS_RS00530;old_locus_tag=YPTS_0105 NC_010634.1 Protein Homology CDS 110476 110691 . + 0 ID=cds105;Parent=gene105;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NC_010634.1 RefSeq gene 111233 111688 . - . ID=gene106;Name=YPTS_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00535;old_locus_tag=YPTS_0106 NC_010634.1 Protein Homology CDS 111233 111688 . - 0 ID=cds106;Parent=gene106;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11 NC_010634.1 RefSeq gene 111739 111900 . + . ID=gene107;Name=YPTS_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00540 NC_010634.1 Protein Homology CDS 111739 111900 . + 0 ID=cds107;Parent=gene107;Dbxref=Genbank:WP_002216739.1;Name=WP_002216739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216739.1;transl_table=11 NC_010634.1 RefSeq gene 112037 112354 . - . ID=gene108;Name=YPTS_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00545;old_locus_tag=YPTS_0107 NC_010634.1 Protein Homology CDS 112037 112354 . - 0 ID=cds108;Parent=gene108;Dbxref=Genbank:WP_004392248.1;Name=WP_004392248.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_004392248.1;transl_table=11 NC_010634.1 RefSeq gene 112732 113892 . + . ID=gene109;Name=YPTS_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00550;old_locus_tag=YPTS_0108 NC_010634.1 Protein Homology CDS 112732 113892 . + 0 ID=cds109;Parent=gene109;Dbxref=Genbank:WP_011191466.1;Name=WP_011191466.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;product=cystathionine gamma-synthase;protein_id=WP_011191466.1;transl_table=11 NC_010634.1 RefSeq gene 113895 116330 . + . ID=gene110;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YPTS_RS00555;old_locus_tag=YPTS_0109 NC_010634.1 Protein Homology CDS 113895 116330 . + 0 ID=cds110;Parent=gene110;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NC_010634.1 RefSeq gene 116563 117447 . + . ID=gene111;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YPTS_RS00560;old_locus_tag=YPTS_0110 NC_010634.1 Protein Homology CDS 116563 117447 . + 0 ID=cds111;Parent=gene111;Dbxref=Genbank:WP_002208933.1;Name=WP_002208933.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NC_010634.1 RefSeq gene 117494 117703 . + . ID=gene112;Name=YPTS_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00565 NC_010634.1 Protein Homology CDS 117494 117703 . + 0 ID=cds112;Parent=gene112;Dbxref=Genbank:WP_041175559.1;Name=WP_041175559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175559.1;transl_table=11 NC_010634.1 RefSeq repeat_region 117550 117888 . + . ID=id4;gbkey=repeat_region NC_010634.1 RefSeq gene 118308 120944 . - . ID=gene113;Name=YPTS_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00570;old_locus_tag=YPTS_0113 NC_010634.1 Protein Homology CDS 118308 120944 . - 0 ID=cds113;Parent=gene113;Dbxref=Genbank:WP_011191467.1;Name=WP_011191467.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_011191467.1;transl_table=11 NC_010634.1 RefSeq gene 121318 122481 . - . ID=gene114;Name=YPTS_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00575;old_locus_tag=YPTS_0114 NC_010634.1 Protein Homology CDS 121318 122481 . - 0 ID=cds114;Parent=gene114;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NC_010634.1 RefSeq gene 122732 123736 . + . ID=gene115;Name=YPTS_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00580;old_locus_tag=YPTS_0115 NC_010634.1 Protein Homology CDS 122732 123736 . + 0 ID=cds115;Parent=gene115;Dbxref=Genbank:WP_011191468.1;Name=WP_011191468.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_011191468.1;transl_table=11 NC_010634.1 RefSeq gene 123919 124692 . + . ID=gene116;Name=YPTS_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00585;old_locus_tag=YPTS_0117 NC_010634.1 Protein Homology CDS 123919 124692 . + 0 ID=cds116;Parent=gene116;Dbxref=Genbank:WP_002209488.1;Name=WP_002209488.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_002209488.1;transl_table=11 NC_010634.1 RefSeq gene 124859 126232 . + . ID=gene117;Name=YPTS_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00590;old_locus_tag=YPTS_0118 NC_010634.1 Protein Homology CDS 124859 126232 . + 0 ID=cds117;Parent=gene117;Dbxref=Genbank:WP_011191469.1;Name=WP_011191469.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_011191469.1;transl_table=11 NC_010634.1 RefSeq gene 126395 126505 . - . ID=gene118;Name=YPTS_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00595 NC_010634.1 Protein Homology CDS 126395 126505 . - 0 ID=cds118;Parent=gene118;Dbxref=Genbank:WP_032465932.1;Name=WP_032465932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465932.1;transl_table=11 NC_010634.1 RefSeq gene 126831 129323 . + . ID=gene119;Name=YPTS_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00600;old_locus_tag=YPTS_0119 NC_010634.1 Protein Homology CDS 126831 129323 . + 0 ID=cds119;Parent=gene119;Dbxref=Genbank:WP_011191470.1;Name=WP_011191470.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_011191470.1;transl_table=11 NC_010634.1 RefSeq gene 129551 130168 . + . ID=gene120;Name=YPTS_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00605;old_locus_tag=YPTS_0120 NC_010634.1 Protein Homology CDS 129551 130168 . + 0 ID=cds120;Parent=gene120;Dbxref=Genbank:WP_011191471.1;Name=WP_011191471.1;gbkey=CDS;product=heme acquisition hemophore HasA;protein_id=WP_011191471.1;transl_table=11 NC_010634.1 RefSeq gene 130334 132142 . + . ID=gene121;Name=YPTS_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00610;old_locus_tag=YPTS_0121 NC_010634.1 Protein Homology CDS 130334 132142 . + 0 ID=cds121;Parent=gene121;Dbxref=Genbank:WP_011191472.1;Name=WP_011191472.1;gbkey=CDS;product=peptidase;protein_id=WP_011191472.1;transl_table=11 NC_010634.1 RefSeq gene 132218 133546 . + . ID=gene122;Name=YPTS_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00615;old_locus_tag=YPTS_0122 NC_010634.1 Protein Homology CDS 132218 133546 . + 0 ID=cds122;Parent=gene122;Dbxref=Genbank:WP_011191473.1;Name=WP_011191473.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_011191473.1;transl_table=11 NC_010634.1 RefSeq gene 133611 134414 . + . ID=gene123;Name=YPTS_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00620;old_locus_tag=YPTS_0123 NC_010634.1 Protein Homology CDS 133611 134414 . + 0 ID=cds123;Parent=gene123;Dbxref=Genbank:WP_011191474.1;Name=WP_011191474.1;gbkey=CDS;product=transporter TonB;protein_id=WP_011191474.1;transl_table=11 NC_010634.1 RefSeq gene 134530 135993 . - . ID=gene124;Name=YPTS_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00625;old_locus_tag=YPTS_0124 NC_010634.1 Protein Homology CDS 134530 135993 . - 0 ID=cds124;Parent=gene124;Dbxref=Genbank:WP_012413409.1;Name=WP_012413409.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_012413409.1;transl_table=11 NC_010634.1 RefSeq gene 136087 136818 . - . ID=gene125;Name=YPTS_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00630;old_locus_tag=YPTS_0125 NC_010634.1 Protein Homology CDS 136087 136818 . - 0 ID=cds125;Parent=gene125;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11 NC_010634.1 RefSeq gene 136965 137882 . + . ID=gene126;Name=YPTS_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00635;old_locus_tag=YPTS_0126 NC_010634.1 Protein Homology CDS 136965 137882 . + 0 ID=cds126;Parent=gene126;Dbxref=Genbank:WP_011191476.1;Name=WP_011191476.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191476.1;transl_table=11 NC_010634.1 RefSeq gene 137865 139265 . - . ID=gene127;Name=YPTS_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00640;old_locus_tag=YPTS_0127 NC_010634.1 Protein Homology CDS 137865 139265 . - 0 ID=cds127;Parent=gene127;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NC_010634.1 RefSeq gene 139483 140118 . + . ID=gene128;Name=YPTS_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00645;old_locus_tag=YPTS_0129 NC_010634.1 Protein Homology CDS 139483 140118 . + 0 ID=cds128;Parent=gene128;Dbxref=Genbank:WP_002209476.1;Name=WP_002209476.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209476.1;transl_table=11 NC_010634.1 RefSeq gene 140131 140538 . + . ID=gene129;Name=YPTS_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00650;old_locus_tag=YPTS_0130 NC_010634.1 Protein Homology CDS 140131 140538 . + 0 ID=cds129;Parent=gene129;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11 NC_010634.1 RefSeq gene 140672 141775 . - . ID=gene130;Name=YPTS_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00655;old_locus_tag=YPTS_0131 NC_010634.1 Protein Homology CDS 140672 141775 . - 0 ID=cds130;Parent=gene130;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11 NC_010634.1 RefSeq gene 141774 142019 . + . ID=gene131;Name=YPTS_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00660 NC_010634.1 Protein Homology CDS 141774 142019 . + 0 ID=cds131;Parent=gene131;Dbxref=Genbank:WP_032465927.1;Name=WP_032465927.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465927.1;transl_table=11 NC_010634.1 RefSeq gene 142255 144129 . + . ID=gene132;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YPTS_RS00665;old_locus_tag=YPTS_0132 NC_010634.1 Protein Homology CDS 142255 144129 . + 0 ID=cds132;Parent=gene132;Dbxref=Genbank:WP_024063655.1;Name=WP_024063655.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_024063655.1;transl_table=11 NC_010634.1 RefSeq gene 144074 144937 . + . ID=gene133;Name=YPTS_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00670;old_locus_tag=YPTS_0133 NC_010634.1 Protein Homology CDS 144074 144937 . + 0 ID=cds133;Parent=gene133;Dbxref=Genbank:WP_012413410.1;Name=WP_012413410.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_012413410.1;transl_table=11 NC_010634.1 RefSeq repeat_region 144959 150736 . + . ID=id5;gbkey=repeat_region NC_010634.1 RefSeq gene 145391 146939 . + . ID=gene134;Name=YPTS_RS00680;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS00680;old_locus_tag=YPTS_R0084 NC_010634.1 RefSeq rRNA 145391 146939 . + . ID=rna0;Parent=gene134;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq exon 145391 146939 . + . ID=id6;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq gene 147073 147148 . + . ID=gene135;Name=YPTS_RS00685;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS00685;old_locus_tag=YPTS_R0001 NC_010634.1 tRNAscan-SE tRNA 147073 147148 . + . ID=rna1;Parent=gene135;anticodon=(pos:147107..147109);gbkey=tRNA;product=tRNA-Glu NC_010634.1 tRNAscan-SE exon 147073 147148 . + . ID=id7;Parent=rna1;anticodon=(pos:147107..147109);gbkey=tRNA;product=tRNA-Glu NC_010634.1 RefSeq gene 147392 150325 . + . ID=gene136;Name=YPTS_RS00690;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS00690;old_locus_tag=YPTS_R0092 NC_010634.1 RefSeq rRNA 147392 150325 . + . ID=rna2;Parent=gene136;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq exon 147392 150325 . + . ID=id8;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq gene 150418 150533 . + . ID=gene137;Name=YPTS_RS00695;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS00695;old_locus_tag=YPTS_R0098 NC_010634.1 cmsearch rRNA 150418 150533 . + . ID=rna3;Parent=gene137;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 150418 150533 . + . ID=id9;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 150659 150735 . + . ID=gene138;Name=YPTS_RS00700;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS00700;old_locus_tag=YPTS_R0002 NC_010634.1 tRNAscan-SE tRNA 150659 150735 . + . ID=rna4;Parent=gene138;anticodon=(pos:150693..150695);gbkey=tRNA;product=tRNA-Asp NC_010634.1 tRNAscan-SE exon 150659 150735 . + . ID=id10;Parent=rna4;anticodon=(pos:150693..150695);gbkey=tRNA;product=tRNA-Asp NC_010634.1 RefSeq gene 150744 150819 . + . ID=gene139;Name=YPTS_RS00705;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS00705;old_locus_tag=YPTS_R0003 NC_010634.1 tRNAscan-SE tRNA 150744 150819 . + . ID=rna5;Parent=gene139;anticodon=(pos:150777..150779);gbkey=tRNA;product=tRNA-Trp NC_010634.1 tRNAscan-SE exon 150744 150819 . + . ID=id11;Parent=rna5;anticodon=(pos:150777..150779);gbkey=tRNA;product=tRNA-Trp NC_010634.1 RefSeq gene 150952 151161 . - . ID=gene140;Name=YPTS_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21595 NC_010634.1 Protein Homology CDS 150952 151161 . - 0 ID=cds134;Parent=gene140;Dbxref=Genbank:WP_016257685.1;Name=WP_016257685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257685.1;transl_table=11 NC_010634.1 RefSeq gene 151802 152758 . + . ID=gene141;Name=YPTS_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00710;old_locus_tag=YPTS_0136 NC_010634.1 Protein Homology CDS 151802 152758 . + 0 ID=cds135;Parent=gene141;Dbxref=Genbank:WP_011191479.1;Name=WP_011191479.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011191479.1;transl_table=11 NC_010634.1 RefSeq gene 152844 154334 . + . ID=gene142;Name=YPTS_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00715;old_locus_tag=YPTS_0137 NC_010634.1 Protein Homology CDS 152844 154334 . + 0 ID=cds136;Parent=gene142;Dbxref=Genbank:WP_011191480.1;Name=WP_011191480.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011191480.1;transl_table=11 NC_010634.1 RefSeq gene 154367 155365 . + . ID=gene143;Name=YPTS_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00720;old_locus_tag=YPTS_0138 NC_010634.1 Protein Homology CDS 154367 155365 . + 0 ID=cds137;Parent=gene143;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11 NC_010634.1 RefSeq gene 155365 156357 . + . ID=gene144;Name=YPTS_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00725;old_locus_tag=YPTS_0139 NC_010634.1 Protein Homology CDS 155365 156357 . + 0 ID=cds138;Parent=gene144;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11 NC_010634.1 RefSeq gene 156344 157225 . - . ID=gene145;Name=YPTS_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00730;old_locus_tag=YPTS_0140 NC_010634.1 Protein Homology CDS 156344 157225 . - 0 ID=cds139;Parent=gene145;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11 NC_010634.1 RefSeq gene 157344 157682 . + . ID=gene146;Name=YPTS_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00735;old_locus_tag=YPTS_0141 NC_010634.1 Protein Homology CDS 157344 157682 . + 0 ID=cds140;Parent=gene146;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11 NC_010634.1 RefSeq repeat_region 157711 158017 . + . ID=id12;gbkey=repeat_region NC_010634.1 RefSeq gene 158062 159585 . - . ID=gene147;Name=YPTS_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00740;old_locus_tag=YPTS_0142 NC_010634.1 Protein Homology CDS 158062 159585 . - 0 ID=cds141;Parent=gene147;Dbxref=Genbank:WP_012413411.1;Name=WP_012413411.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATPase;protein_id=WP_012413411.1;transl_table=11 NC_010634.1 RefSeq gene 160209 161855 . + . ID=gene148;Name=YPTS_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00745;old_locus_tag=YPTS_0143 NC_010634.1 Protein Homology CDS 160209 161855 . + 0 ID=cds142;Parent=gene148;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11 NC_010634.1 RefSeq gene 161852 162109 . + . ID=gene149;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YPTS_RS00750;old_locus_tag=YPTS_0144 NC_010634.1 Protein Homology CDS 161852 162109 . + 0 ID=cds143;Parent=gene149;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11 NC_010634.1 RefSeq gene 162132 163058 . + . ID=gene150;Name=YPTS_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00755;old_locus_tag=YPTS_0145 NC_010634.1 Protein Homology CDS 162132 163058 . + 0 ID=cds144;Parent=gene150;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11 NC_010634.1 RefSeq gene 163369 165219 . + . ID=gene151;Name=YPTS_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00760;old_locus_tag=YPTS_0146 NC_010634.1 Protein Homology CDS 163369 165219 . + 0 ID=cds145;Parent=gene151;Dbxref=Genbank:WP_002212014.1;Name=WP_002212014.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11 NC_010634.1 RefSeq gene 165225 166769 . + . ID=gene152;Name=YPTS_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00765;old_locus_tag=YPTS_0147 NC_010634.1 Protein Homology CDS 165225 166769 . + 0 ID=cds146;Parent=gene152;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11 NC_010634.1 RefSeq gene 166900 167364 . - . ID=gene153;Name=YPTS_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00770;old_locus_tag=YPTS_0148 NC_010634.1 Protein Homology CDS 166900 167364 . - 0 ID=cds147;Parent=gene153;Dbxref=Genbank:WP_011191484.1;Name=WP_011191484.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191484.1;transl_table=11 NC_010634.1 RefSeq gene 167382 167846 . - . ID=gene154;Name=YPTS_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00775;old_locus_tag=YPTS_0149 NC_010634.1 Protein Homology CDS 167382 167846 . - 0 ID=cds148;Parent=gene154;Dbxref=Genbank:WP_012413412.1;Name=WP_012413412.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413412.1;transl_table=11 NC_010634.1 RefSeq repeat_region 167494 167894 . + . ID=id13;gbkey=repeat_region NC_010634.1 RefSeq gene 167926 168387 . - . ID=gene155;Name=YPTS_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00780;old_locus_tag=YPTS_0150 NC_010634.1 Protein Homology CDS 167926 168387 . - 0 ID=cds149;Parent=gene155;Dbxref=Genbank:WP_002212010.1;Name=WP_002212010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212010.1;transl_table=11 NC_010634.1 RefSeq repeat_region 168035 168435 . + . ID=id14;gbkey=repeat_region NC_010634.1 RefSeq gene 168371 169249 . - . ID=gene156;Name=YPTS_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00785;old_locus_tag=YPTS_0151 NC_010634.1 Protein Homology CDS 168371 169249 . - 0 ID=cds150;Parent=gene156;Dbxref=Genbank:WP_002228241.1;Name=WP_002228241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228241.1;transl_table=11 NC_010634.1 RefSeq gene 169897 170106 . + . ID=gene157;Name=YPTS_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00790;old_locus_tag=YPTS_0152 NC_010634.1 Protein Homology CDS 169897 170106 . + 0 ID=cds151;Parent=gene157;Dbxref=Genbank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NC_010634.1 RefSeq gene 170161 171042 . - . ID=gene158;Name=YPTS_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00795;old_locus_tag=YPTS_0153 NC_010634.1 Protein Homology CDS 170161 171042 . - 0 ID=cds152;Parent=gene158;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11 NC_010634.1 RefSeq gene 171338 172816 . + . ID=gene159;Name=YPTS_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00800;old_locus_tag=YPTS_0154 NC_010634.1 Protein Homology CDS 171338 172816 . + 0 ID=cds153;Parent=gene159;Dbxref=Genbank:WP_011191486.1;Name=WP_011191486.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_011191486.1;transl_table=11 NC_010634.1 RefSeq gene 172997 173197 . + . ID=gene160;Name=YPTS_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00805;old_locus_tag=YPTS_0155 NC_010634.1 Protein Homology CDS 172997 173197 . + 0 ID=cds154;Parent=gene160;Dbxref=Genbank:WP_002212006.1;Name=WP_002212006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212006.1;transl_table=11 NC_010634.1 RefSeq gene 173405 174841 . + . ID=gene161;Name=YPTS_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00810;old_locus_tag=YPTS_0156 NC_010634.1 Protein Homology CDS 173405 174841 . + 0 ID=cds155;Parent=gene161;Dbxref=Genbank:WP_041175435.1;Name=WP_041175435.1;gbkey=CDS;product=colicin;protein_id=WP_041175435.1;transl_table=11 NC_010634.1 RefSeq gene 174841 175104 . + . ID=gene162;Name=YPTS_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00815;old_locus_tag=YPTS_0157 NC_010634.1 Protein Homology CDS 174841 175104 . + 0 ID=cds156;Parent=gene162;Dbxref=Genbank:WP_002212004.1;Name=WP_002212004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212004.1;transl_table=11 NC_010634.1 RefSeq gene 175387 175611 . + . ID=gene163;Name=YPTS_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00820 NC_010634.1 Protein Homology CDS 175387 175611 . + 0 ID=cds157;Parent=gene163;Dbxref=Genbank:WP_042592917.1;Name=WP_042592917.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_042592917.1;transl_table=11 NC_010634.1 RefSeq gene 175620 175874 . + . ID=gene164;Name=YPTS_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00825;old_locus_tag=YPTS_0158 NC_010634.1 Protein Homology CDS 175620 175874 . + 0 ID=cds158;Parent=gene164;Dbxref=Genbank:WP_011191487.1;Name=WP_011191487.1;gbkey=CDS;product=colicin transporter;protein_id=WP_011191487.1;transl_table=11 NC_010634.1 RefSeq repeat_region 175953 176212 . + . ID=id15;gbkey=repeat_region NC_010634.1 RefSeq gene 176027 176446 . + . ID=gene165;Name=YPTS_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00830;old_locus_tag=YPTS_0159 NC_010634.1 Protein Homology CDS 176027 176446 . + 0 ID=cds159;Parent=gene165;Dbxref=Genbank:WP_011191488.1;Name=WP_011191488.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_011191488.1;transl_table=11 NC_010634.1 RefSeq gene 176448 176702 . + . ID=gene166;Name=YPTS_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00835;old_locus_tag=YPTS_0160 NC_010634.1 Protein Homology CDS 176448 176702 . + 0 ID=cds160;Parent=gene166;Dbxref=Genbank:WP_011191489.1;Name=WP_011191489.1;gbkey=CDS;product=colicin immunity protein E2;protein_id=WP_011191489.1;transl_table=11 NC_010634.1 RefSeq repeat_region 176781 177040 . + . ID=id16;gbkey=repeat_region NC_010634.1 RefSeq gene 176855 177283 . + . ID=gene167;Name=YPTS_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00840;old_locus_tag=YPTS_0161 NC_010634.1 Protein Homology CDS 176855 177283 . + 0 ID=cds161;Parent=gene167;Dbxref=Genbank:WP_011191490.1;Name=WP_011191490.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_011191490.1;transl_table=11 NC_010634.1 RefSeq gene 177280 177543 . + . ID=gene168;Name=YPTS_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00845;old_locus_tag=YPTS_0162 NC_010634.1 Protein Homology CDS 177280 177543 . + 0 ID=cds162;Parent=gene168;Dbxref=Genbank:WP_011191491.1;Name=WP_011191491.1;gbkey=CDS;product=colicin immunity protein E2;protein_id=WP_011191491.1;transl_table=11 NC_010634.1 RefSeq gene 177966 178175 . - . ID=gene169;Name=YPTS_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00850 NC_010634.1 Protein Homology CDS 177966 178175 . - 0 ID=cds163;Parent=gene169;Dbxref=Genbank:WP_042592918.1;Name=WP_042592918.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592918.1;transl_table=11 NC_010634.1 RefSeq gene 178101 178472 . + . ID=gene170;Name=YPTS_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00855;old_locus_tag=YPTS_0163 NC_010634.1 Protein Homology CDS 178101 178472 . + 0 ID=cds164;Parent=gene170;Dbxref=Genbank:WP_011191492.1;Name=WP_011191492.1;gbkey=CDS;product=antitermination protein;protein_id=WP_011191492.1;transl_table=11 NC_010634.1 RefSeq gene 179085 179420 . + . ID=gene171;Name=YPTS_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00860;old_locus_tag=YPTS_0165 NC_010634.1 Protein Homology CDS 179085 179420 . + 0 ID=cds165;Parent=gene171;Dbxref=Genbank:WP_011191493.1;Name=WP_011191493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191493.1;transl_table=11 NC_010634.1 RefSeq gene 179679 180497 . - . ID=gene172;Name=YPTS_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00865;old_locus_tag=YPTS_0167 NC_010634.1 Protein Homology CDS 179679 180497 . - 0 ID=cds166;Parent=gene172;Dbxref=Genbank:WP_002215825.1;Name=WP_002215825.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002215825.1;transl_table=11 NC_010634.1 RefSeq gene 180463 181740 . - . ID=gene173;Name=YPTS_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00870;old_locus_tag=YPTS_0168 NC_010634.1 Protein Homology CDS 180463 181740 . - 0 ID=cds167;Parent=gene173;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11 NC_010634.1 RefSeq gene 181847 184498 . - . ID=gene174;Name=YPTS_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00875;old_locus_tag=YPTS_0169 NC_010634.1 Protein Homology CDS 181847 184498 . - 0 ID=cds168;Parent=gene174;Dbxref=Genbank:WP_011191494.1;Name=WP_011191494.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_011191494.1;transl_table=11 NC_010634.1 RefSeq gene 184526 185257 . - . ID=gene175;Name=YPTS_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00880;old_locus_tag=YPTS_0170 NC_010634.1 Protein Homology CDS 184526 185257 . - 0 ID=cds169;Parent=gene175;Dbxref=Genbank:WP_011191495.1;Name=WP_011191495.1;gbkey=CDS;product=fimbrial chaperone;protein_id=WP_011191495.1;transl_table=11 NC_010634.1 RefSeq gene 185321 185851 . - . ID=gene176;Name=YPTS_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00885;old_locus_tag=YPTS_0171 NC_010634.1 Protein Homology CDS 185321 185851 . - 0 ID=cds170;Parent=gene176;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NC_010634.1 RefSeq gene 186162 186338 . + . ID=gene177;Name=YPTS_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00890 NC_010634.1 Protein Homology CDS 186162 186338 . + 0 ID=cds171;Parent=gene177;Dbxref=Genbank:WP_002231894.1;Name=WP_002231894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231894.1;transl_table=11 NC_010634.1 RefSeq gene 186643 187434 . - . ID=gene178;Name=YPTS_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00895;old_locus_tag=YPTS_0172 NC_010634.1 Protein Homology CDS 186643 187434 . - 0 ID=cds172;Parent=gene178;Dbxref=Genbank:WP_011191496.1;Name=WP_011191496.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_011191496.1;transl_table=11 NC_010634.1 RefSeq gene 187673 187954 . - . ID=gene179;Name=YPTS_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00900;old_locus_tag=YPTS_0173 NC_010634.1 Protein Homology CDS 187673 187954 . - 0 ID=cds173;Parent=gene179;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11 NC_010634.1 RefSeq gene 187974 188159 . - . ID=gene180;Name=YPTS_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00905;old_locus_tag=YPTS_0174 NC_010634.1 Protein Homology CDS 187974 188159 . - 0 ID=cds174;Parent=gene180;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NC_010634.1 RefSeq gene 188158 190179 . + . ID=gene181;Name=YPTS_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00910;old_locus_tag=YPTS_0175 NC_010634.1 Protein Homology CDS 188158 190179 . + 0 ID=cds175;Parent=gene181;Dbxref=Genbank:WP_012413416.1;Name=WP_012413416.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_012413416.1;transl_table=11 NC_010634.1 RefSeq gene 190347 191840 . - . ID=gene182;Name=YPTS_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00915;old_locus_tag=YPTS_0176 NC_010634.1 Protein Homology CDS 190347 191840 . - 0 ID=cds176;Parent=gene182;Dbxref=Genbank:WP_032466602.1;Name=WP_032466602.1;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_032466602.1;transl_table=11 NC_010634.1 RefSeq gene 191847 193133 . - . ID=gene183;Name=YPTS_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00920;old_locus_tag=YPTS_0177 NC_010634.1 Protein Homology CDS 191847 193133 . - 0 ID=cds177;Parent=gene183;Dbxref=Genbank:WP_002228177.1;Name=WP_002228177.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11 NC_010634.1 RefSeq gene 193252 193578 . + . ID=gene184;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YPTS_RS00925;old_locus_tag=YPTS_0178 NC_010634.1 Protein Homology CDS 193252 193578 . + 0 ID=cds178;Parent=gene184;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11 NC_010634.1 RefSeq gene 194058 195317 . + . ID=gene185;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YPTS_RS00930;old_locus_tag=YPTS_0179 NC_010634.1 Protein Homology CDS 194058 195317 . + 0 ID=cds179;Parent=gene185;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NC_010634.1 RefSeq gene 195867 196949 . + . ID=gene186;Name=YPTS_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00935;old_locus_tag=YPTS_0180 NC_010634.1 Protein Homology CDS 195867 196949 . + 0 ID=cds180;Parent=gene186;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11 NC_010634.1 RefSeq gene 196970 198046 . + . ID=gene187;Name=YPTS_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00940;old_locus_tag=YPTS_0181 NC_010634.1 Protein Homology CDS 196970 198046 . + 0 ID=cds181;Parent=gene187;Dbxref=Genbank:WP_012304740.1;Name=WP_012304740.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_012304740.1;transl_table=11 NC_010634.1 RefSeq gene 198395 199525 . + . ID=gene188;Name=YPTS_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00945;old_locus_tag=YPTS_0182 NC_010634.1 Protein Homology CDS 198395 199525 . + 0 ID=cds182;Parent=gene188;Dbxref=Genbank:WP_011191498.1;Name=WP_011191498.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_011191498.1;transl_table=11 NC_010634.1 RefSeq gene 199522 200784 . + . ID=gene189;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YPTS_RS00950;old_locus_tag=YPTS_0183 NC_010634.1 Protein Homology CDS 199522 200784 . + 0 ID=cds183;Parent=gene189;Dbxref=Genbank:WP_011191499.1;Name=WP_011191499.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_011191499.1;transl_table=11 NC_010634.1 RefSeq gene 200781 201848 . + . ID=gene190;Name=YPTS_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00955;old_locus_tag=YPTS_0184 NC_010634.1 Protein Homology CDS 200781 201848 . + 0 ID=cds184;Parent=gene190;Dbxref=Genbank:WP_011191500.1;Name=WP_011191500.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_011191500.1;transl_table=11 NC_010634.1 RefSeq gene 202143 203024 . + . ID=gene191;Name=YPTS_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00960;old_locus_tag=YPTS_0185 NC_010634.1 Protein Homology CDS 202143 203024 . + 0 ID=cds185;Parent=gene191;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11 NC_010634.1 RefSeq gene 203002 203739 . + . ID=gene192;Name=YPTS_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00965;old_locus_tag=YPTS_0186 NC_010634.1 Protein Homology CDS 203002 203739 . + 0 ID=cds186;Parent=gene192;Dbxref=Genbank:WP_012304738.1;Name=WP_012304738.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_012304738.1;transl_table=11 NC_010634.1 RefSeq gene 203741 204871 . + . ID=gene193;Name=YPTS_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00970;old_locus_tag=YPTS_0187 NC_010634.1 Protein Homology CDS 203741 204871 . + 0 ID=cds187;Parent=gene193;Dbxref=Genbank:WP_002211981.1;Name=WP_002211981.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_002211981.1;transl_table=11 NC_010634.1 RefSeq gene 204873 206129 . + . ID=gene194;Name=YPTS_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00975;old_locus_tag=YPTS_0188 NC_010634.1 Protein Homology CDS 204873 206129 . + 0 ID=cds188;Parent=gene194;Dbxref=Genbank:WP_011191502.1;Name=WP_011191502.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=translocase;protein_id=WP_011191502.1;transl_table=11 NC_010634.1 RefSeq gene 206152 207237 . + . ID=gene195;Name=YPTS_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00980;old_locus_tag=YPTS_0189 NC_010634.1 Protein Homology CDS 206152 207237 . + 0 ID=cds189;Parent=gene195;Dbxref=Genbank:WP_011191503.1;Name=WP_011191503.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_011191503.1;transl_table=11 NC_010634.1 RefSeq gene 207234 208598 . + . ID=gene196;Name=YPTS_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00985;old_locus_tag=YPTS_0190 NC_010634.1 Protein Homology CDS 207234 208598 . + 0 ID=cds190;Parent=gene196;Dbxref=Genbank:WP_002211978.1;Name=WP_002211978.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=polymerase;protein_id=WP_002211978.1;transl_table=11 NC_010634.1 RefSeq gene 208607 209347 . + . ID=gene197;Name=YPTS_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00990;old_locus_tag=YPTS_0191 NC_010634.1 Protein Homology CDS 208607 209347 . + 0 ID=cds191;Parent=gene197;Dbxref=Genbank:WP_011191504.1;Name=WP_011191504.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_011191504.1;transl_table=11 NC_010634.1 RefSeq repeat_region 209651 209776 . + . ID=id17;gbkey=repeat_region NC_010634.1 RefSeq gene 209901 211292 . + . ID=gene198;Name=YPTS_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS00995;old_locus_tag=YPTS_0192 NC_010634.1 Protein Homology CDS 209901 211292 . + 0 ID=cds192;Parent=gene198;Dbxref=Genbank:WP_002220976.1;Name=WP_002220976.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220976.1;transl_table=11 NC_010634.1 RefSeq gene 211441 211517 . + . ID=gene199;Name=YPTS_RS01000;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01000;old_locus_tag=YPTS_R0004 NC_010634.1 tRNAscan-SE tRNA 211441 211517 . + . ID=rna6;Parent=gene199;anticodon=(pos:211475..211477);gbkey=tRNA;product=tRNA-Arg NC_010634.1 tRNAscan-SE exon 211441 211517 . + . ID=id18;Parent=rna6;anticodon=(pos:211475..211477);gbkey=tRNA;product=tRNA-Arg NC_010634.1 RefSeq gene 211601 211676 . + . ID=gene200;Name=YPTS_RS01005;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01005;old_locus_tag=YPTS_R0005 NC_010634.1 tRNAscan-SE tRNA 211601 211676 . + . ID=rna7;Parent=gene200;anticodon=(pos:211634..211636);gbkey=tRNA;product=tRNA-His NC_010634.1 tRNAscan-SE exon 211601 211676 . + . ID=id19;Parent=rna7;anticodon=(pos:211634..211636);gbkey=tRNA;product=tRNA-His NC_010634.1 RefSeq gene 211693 211779 . + . ID=gene201;Name=YPTS_RS01010;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01010;old_locus_tag=YPTS_R0006 NC_010634.1 tRNAscan-SE tRNA 211693 211779 . + . ID=rna8;Parent=gene201;anticodon=(pos:211727..211729);gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 211693 211779 . + . ID=id20;Parent=rna8;anticodon=(pos:211727..211729);gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq gene 211855 211931 . + . ID=gene202;Name=YPTS_RS01015;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01015;old_locus_tag=YPTS_R0007 NC_010634.1 tRNAscan-SE tRNA 211855 211931 . + . ID=rna9;Parent=gene202;anticodon=(pos:211889..211891);gbkey=tRNA;product=tRNA-Pro NC_010634.1 tRNAscan-SE exon 211855 211931 . + . ID=id21;Parent=rna9;anticodon=(pos:211889..211891);gbkey=tRNA;product=tRNA-Pro NC_010634.1 RefSeq gene 212755 213975 . - . ID=gene203;Name=YPTS_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01020;old_locus_tag=YPTS_0193 NC_010634.1 Protein Homology CDS 212755 213975 . - 0 ID=cds193;Parent=gene203;Dbxref=Genbank:WP_011191505.1;Name=WP_011191505.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_011191505.1;transl_table=11 NC_010634.1 RefSeq gene 213978 215102 . - . ID=gene204;Name=YPTS_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01025;old_locus_tag=YPTS_0194 NC_010634.1 Protein Homology CDS 213978 215102 . - 0 ID=cds194;Parent=gene204;Dbxref=Genbank:WP_011191506.1;Name=WP_011191506.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_011191506.1;transl_table=11 NC_010634.1 RefSeq gene 215133 215882 . - . ID=gene205;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YPTS_RS01030;old_locus_tag=YPTS_0195 NC_010634.1 Protein Homology CDS 215133 215882 . - 0 ID=cds195;Parent=gene205;Dbxref=Genbank:WP_011191507.1;Name=WP_011191507.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_011191507.1;transl_table=11 NC_010634.1 RefSeq gene 215879 216820 . - . ID=gene206;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YPTS_RS01035;old_locus_tag=YPTS_0196 NC_010634.1 Protein Homology CDS 215879 216820 . - 0 ID=cds196;Parent=gene206;Dbxref=Genbank:WP_011191508.1;Name=WP_011191508.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_011191508.1;transl_table=11 NC_010634.1 RefSeq gene 217314 219866 . + . ID=gene207;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=YPTS_RS01040;old_locus_tag=YPTS_0197 NC_010634.1 Protein Homology CDS 217314 219866 . + 0 ID=cds197;Parent=gene207;Dbxref=Genbank:WP_002211468.1;Name=WP_002211468.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_002211468.1;transl_table=11 NC_010634.1 RefSeq gene 219902 220225 . - . ID=gene208;Name=YPTS_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01045;old_locus_tag=YPTS_0198 NC_010634.1 GeneMarkS+ CDS 219902 220225 . - 0 ID=cds198;Parent=gene208;Dbxref=Genbank:WP_012413417.1;Name=WP_012413417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413417.1;transl_table=11 NC_010634.1 RefSeq repeat_region 220350 221666 . + . ID=id22;gbkey=repeat_region NC_010634.1 RefSeq gene 220386 221594 . - . ID=gene209;Name=YPTS_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01050;old_locus_tag=YPTS_0199 NC_010634.1 Protein Homology CDS 220386 221594 . - 0 ID=cds199;Parent=gene209;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_010634.1 RefSeq gene 221642 222781 . - . ID=gene210;Name=YPTS_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01055;old_locus_tag=YPTS_0200 NC_010634.1 Protein Homology CDS 221642 222781 . - 0 ID=cds200;Parent=gene210;Dbxref=Genbank:WP_012413418.1;Name=WP_012413418.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413418.1;transl_table=11 NC_010634.1 RefSeq gene 222967 223290 . - . ID=gene211;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YPTS_RS01060;old_locus_tag=YPTS_0201 NC_010634.1 Protein Homology CDS 222967 223290 . - 0 ID=cds201;Parent=gene211;Dbxref=Genbank:WP_011191510.1;Name=WP_011191510.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_011191510.1;transl_table=11 NC_010634.1 RefSeq gene 223442 223642 . + . ID=gene212;Name=YPTS_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01065;old_locus_tag=YPTS_0202 NC_010634.1 Protein Homology CDS 223442 223642 . + 0 ID=cds202;Parent=gene212;Dbxref=Genbank:WP_011191511.1;Name=WP_011191511.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191511.1;transl_table=11 NC_010634.1 RefSeq gene 223810 224634 . + . ID=gene213;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YPTS_RS01070;old_locus_tag=YPTS_0203 NC_010634.1 Protein Homology CDS 223810 224634 . + 0 ID=cds203;Parent=gene213;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NC_010634.1 RefSeq gene 224699 225403 . + . ID=gene214;Name=YPTS_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01075;old_locus_tag=YPTS_0204 NC_010634.1 Protein Homology CDS 224699 225403 . + 0 ID=cds204;Parent=gene214;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11 NC_010634.1 RefSeq gene 225400 226311 . + . ID=gene215;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YPTS_RS01080;old_locus_tag=YPTS_0205 NC_010634.1 Protein Homology CDS 225400 226311 . + 0 ID=cds205;Parent=gene215;Dbxref=Genbank:WP_011191512.1;Name=WP_011191512.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_011191512.1;transl_table=11 NC_010634.1 RefSeq gene 226311 227027 . + . ID=gene216;Name=YPTS_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01085;old_locus_tag=YPTS_0206 NC_010634.1 Protein Homology CDS 226311 227027 . + 0 ID=cds206;Parent=gene216;Dbxref=Genbank:WP_011191513.1;Name=WP_011191513.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_011191513.1;transl_table=11 NC_010634.1 RefSeq gene 227126 229288 . + . ID=gene217;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=YPTS_RS01090;old_locus_tag=YPTS_0207 NC_010634.1 Protein Homology CDS 227126 229288 . + 0 ID=cds207;Parent=gene217;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11 NC_010634.1 RefSeq gene 229402 230067 . - . ID=gene218;Name=YPTS_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01095;old_locus_tag=YPTS_0208 NC_010634.1 Protein Homology CDS 229402 230067 . - 0 ID=cds208;Parent=gene218;Dbxref=Genbank:WP_011191514.1;Name=WP_011191514.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_011191514.1;transl_table=11 NC_010634.1 RefSeq gene 230495 231727 . + . ID=gene219;Name=YPTS_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01100;old_locus_tag=YPTS_0209 NC_010634.1 Protein Homology CDS 230495 231727 . + 0 ID=cds209;Parent=gene219;Dbxref=Genbank:WP_011191515.1;Name=WP_011191515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191515.1;transl_table=11 NC_010634.1 RefSeq gene 231753 232583 . + . ID=gene220;Name=YPTS_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01105;old_locus_tag=YPTS_0210 NC_010634.1 Protein Homology CDS 231753 232583 . + 0 ID=cds210;Parent=gene220;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11 NC_010634.1 RefSeq gene 233233 234183 . + . ID=gene221;Name=YPTS_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01110;old_locus_tag=YPTS_0213 NC_010634.1 Protein Homology CDS 233233 234183 . + 0 ID=cds211;Parent=gene221;Dbxref=Genbank:WP_002211480.1;Name=WP_002211480.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_002211480.1;transl_table=11 NC_010634.1 RefSeq gene 234281 235171 . - . ID=gene222;Name=YPTS_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01115;old_locus_tag=YPTS_0214 NC_010634.1 Protein Homology CDS 234281 235171 . - 0 ID=cds212;Parent=gene222;Dbxref=Genbank:WP_002211481.1;Name=WP_002211481.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_002211481.1;transl_table=11 NC_010634.1 RefSeq gene 235258 235728 . - . ID=gene223;Name=YPTS_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01120;old_locus_tag=YPTS_0215 NC_010634.1 Protein Homology CDS 235258 235728 . - 0 ID=cds213;Parent=gene223;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11 NC_010634.1 RefSeq gene 235950 236828 . + . ID=gene224;Name=YPTS_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01125;old_locus_tag=YPTS_0216 NC_010634.1 Protein Homology CDS 235950 236828 . + 0 ID=cds214;Parent=gene224;Dbxref=Genbank:WP_002211483.1;Name=WP_002211483.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NC_010634.1 RefSeq gene 236905 238737 . + . ID=gene225;Name=YPTS_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01130;old_locus_tag=YPTS_0217 NC_010634.1 Protein Homology CDS 236905 238737 . + 0 ID=cds215;Parent=gene225;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NC_010634.1 RefSeq gene 238844 239464 . + . ID=gene226;Name=YPTS_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01135;old_locus_tag=YPTS_0218 NC_010634.1 Protein Homology CDS 238844 239464 . + 0 ID=cds216;Parent=gene226;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11 NC_010634.1 RefSeq gene 239515 240135 . - . ID=gene227;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YPTS_RS01140;old_locus_tag=YPTS_0219 NC_010634.1 Protein Homology CDS 239515 240135 . - 0 ID=cds217;Parent=gene227;Dbxref=Genbank:WP_002211486.1;Name=WP_002211486.1;gbkey=CDS;gene=rhtB;product=threonine transporter RhtB;protein_id=WP_002211486.1;transl_table=11 NC_010634.1 RefSeq gene 240331 241344 . + . ID=gene228;Name=YPTS_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01145;old_locus_tag=YPTS_0220 NC_010634.1 Protein Homology CDS 240331 241344 . + 0 ID=cds218;Parent=gene228;Dbxref=Genbank:WP_002211487.1;Name=WP_002211487.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NC_010634.1 RefSeq gene 241379 242188 . + . ID=gene229;Name=YPTS_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01150;old_locus_tag=YPTS_0221 NC_010634.1 Protein Homology CDS 241379 242188 . + 0 ID=cds219;Parent=gene229;Dbxref=Genbank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211488.1;transl_table=11 NC_010634.1 RefSeq gene 242464 243663 . + . ID=gene230;Name=YPTS_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01155;old_locus_tag=YPTS_0222 NC_010634.1 Protein Homology CDS 242464 243663 . + 0 ID=cds220;Parent=gene230;Dbxref=Genbank:WP_002366764.1;Name=WP_002366764.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_002366764.1;transl_table=11 NC_010634.1 RefSeq gene 243737 244852 . - . ID=gene231;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YPTS_RS01160;old_locus_tag=YPTS_0223 NC_010634.1 Protein Homology CDS 243737 244852 . - 0 ID=cds221;Parent=gene231;Dbxref=Genbank:WP_002211490.1;Name=WP_002211490.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NC_010634.1 RefSeq gene 245205 245303 . + . ID=gene232;Name=YPTS_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01165 NC_010634.1 Protein Homology CDS 245205 245303 . + 0 ID=cds222;Parent=gene232;Dbxref=Genbank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002216569.1;transl_table=11 NC_010634.1 RefSeq gene 245477 247132 . + . ID=gene233;Name=YPTS_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01170;old_locus_tag=YPTS_0224 NC_010634.1 Protein Homology CDS 245477 247132 . + 0 ID=cds223;Parent=gene233;Dbxref=Genbank:WP_002211491.1;Name=WP_002211491.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002211491.1;transl_table=11 NC_010634.1 RefSeq gene 247122 248396 . + . ID=gene234;Name=YPTS_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01175;old_locus_tag=YPTS_0225 NC_010634.1 Protein Homology CDS 247122 248396 . + 0 ID=cds224;Parent=gene234;Dbxref=Genbank:WP_011191516.1;Name=WP_011191516.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_011191516.1;transl_table=11 NC_010634.1 RefSeq gene 248393 249688 . + . ID=gene235;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YPTS_RS01180;old_locus_tag=YPTS_0226 NC_010634.1 Protein Homology CDS 248393 249688 . + 0 ID=cds225;Parent=gene235;Dbxref=Genbank:WP_011191517.1;Name=WP_011191517.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_011191517.1;transl_table=11 NC_010634.1 RefSeq gene 249832 250359 . - . ID=gene236;Name=YPTS_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01185;old_locus_tag=YPTS_0227 NC_010634.1 Protein Homology CDS 249832 250359 . - 0 ID=cds226;Parent=gene236;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11 NC_010634.1 RefSeq gene 250489 251157 . - . ID=gene237;Name=YPTS_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01190;old_locus_tag=YPTS_0228 NC_010634.1 Protein Homology CDS 250489 251157 . - 0 ID=cds227;Parent=gene237;Dbxref=Genbank:WP_011191518.1;Name=WP_011191518.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191518.1;transl_table=11 NC_010634.1 RefSeq gene 251441 251695 . + . ID=gene238;Name=YPTS_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01195;old_locus_tag=YPTS_0229 NC_010634.1 Protein Homology CDS 251441 251695 . + 0 ID=cds228;Parent=gene238;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NC_010634.1 RefSeq gene 251760 254126 . - . ID=gene239;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=YPTS_RS01200;old_locus_tag=YPTS_0230 NC_010634.1 Protein Homology CDS 251760 254126 . - 0 ID=cds229;Parent=gene239;Dbxref=Genbank:WP_011191519.1;Name=WP_011191519.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=cadmium-transporting ATPase;protein_id=WP_011191519.1;transl_table=11 NC_010634.1 RefSeq gene 254540 255166 . - . ID=gene240;Name=YPTS_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01205;old_locus_tag=YPTS_0231 NC_010634.1 Protein Homology CDS 254540 255166 . - 0 ID=cds230;Parent=gene240;Dbxref=Genbank:WP_002211498.1;Name=WP_002211498.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211498.1;transl_table=11 NC_010634.1 RefSeq gene 255456 255776 . + . ID=gene241;Name=YPTS_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01210;old_locus_tag=YPTS_0232 NC_010634.1 Protein Homology CDS 255456 255776 . + 0 ID=cds231;Parent=gene241;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11 NC_010634.1 RefSeq gene 255988 256407 . + . ID=gene242;Name=YPTS_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01215;old_locus_tag=YPTS_0233 NC_010634.1 Protein Homology CDS 255988 256407 . + 0 ID=cds232;Parent=gene242;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11 NC_010634.1 RefSeq gene 256584 256856 . - . ID=gene243;Name=YPTS_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01220;old_locus_tag=YPTS_0234 NC_010634.1 Protein Homology CDS 256584 256856 . - 0 ID=cds233;Parent=gene243;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11 NC_010634.1 RefSeq gene 256846 257508 . - . ID=gene244;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YPTS_RS01225;old_locus_tag=YPTS_0235 NC_010634.1 Protein Homology CDS 256846 257508 . - 0 ID=cds234;Parent=gene244;Dbxref=Genbank:WP_011191520.1;Name=WP_011191520.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_011191520.1;transl_table=11 NC_010634.1 RefSeq gene 257618 257761 . - . ID=gene245;Name=YPTS_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01230 NC_010634.1 Protein Homology CDS 257618 257761 . - 0 ID=cds235;Parent=gene245;Dbxref=Genbank:WP_002215975.1;Name=WP_002215975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215975.1;transl_table=11 NC_010634.1 RefSeq gene 257790 259442 . + . ID=gene246;Name=YPTS_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01235;old_locus_tag=YPTS_0236 NC_010634.1 Protein Homology CDS 257790 259442 . + 0 ID=cds236;Parent=gene246;Dbxref=Genbank:WP_012413421.1;Name=WP_012413421.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_012413421.1;transl_table=11 NC_010634.1 RefSeq gene 259448 260116 . + . ID=gene247;Name=YPTS_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01240;old_locus_tag=YPTS_0237 NC_010634.1 Protein Homology CDS 259448 260116 . + 0 ID=cds237;Parent=gene247;Dbxref=Genbank:WP_004391337.1;Name=WP_004391337.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_004391337.1;transl_table=11 NC_010634.1 RefSeq gene 260106 261059 . + . ID=gene248;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YPTS_RS01245;old_locus_tag=YPTS_0238 NC_010634.1 Protein Homology CDS 260106 261059 . + 0 ID=cds238;Parent=gene248;Dbxref=Genbank:WP_002211505.1;Name=WP_002211505.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NC_010634.1 RefSeq gene 261370 262227 . + . ID=gene249;Name=YPTS_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01250;old_locus_tag=YPTS_0239 NC_010634.1 Protein Homology CDS 261370 262227 . + 0 ID=cds239;Parent=gene249;Dbxref=Genbank:WP_002211506.1;Name=WP_002211506.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_002211506.1;transl_table=11 NC_010634.1 RefSeq gene 262434 262826 . - . ID=gene250;Name=YPTS_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01255;old_locus_tag=YPTS_0240 NC_010634.1 Protein Homology CDS 262434 262826 . - 0 ID=cds240;Parent=gene250;Dbxref=Genbank:WP_011191522.1;Name=WP_011191522.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_011191522.1;transl_table=11 NC_010634.1 RefSeq gene 263248 264363 . + . ID=gene251;Name=YPTS_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01260;old_locus_tag=YPTS_0241 NC_010634.1 Protein Homology CDS 263248 264363 . + 0 ID=cds241;Parent=gene251;Dbxref=Genbank:WP_011191523.1;Name=WP_011191523.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_011191523.1;transl_table=11 NC_010634.1 RefSeq gene 264544 265470 . + . ID=gene252;Name=YPTS_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01265;old_locus_tag=YPTS_0242 NC_010634.1 Protein Homology CDS 264544 265470 . + 0 ID=cds242;Parent=gene252;Dbxref=Genbank:WP_012413422.1;Name=WP_012413422.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_012413422.1;transl_table=11 NC_010634.1 RefSeq gene 265467 266753 . + . ID=gene253;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YPTS_RS01270;old_locus_tag=YPTS_0243 NC_010634.1 Protein Homology CDS 265467 266753 . + 0 ID=cds243;Parent=gene253;Dbxref=Genbank:WP_002211510.1;Name=WP_002211510.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_002211510.1;transl_table=11 NC_010634.1 RefSeq gene 266750 267517 . + . ID=gene254;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YPTS_RS01275;old_locus_tag=YPTS_0244 NC_010634.1 Protein Homology CDS 266750 267517 . + 0 ID=cds244;Parent=gene254;Dbxref=Genbank:WP_011191524.1;Name=WP_011191524.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_011191524.1;transl_table=11 NC_010634.1 RefSeq gene 267562 268263 . + . ID=gene255;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YPTS_RS01280;old_locus_tag=YPTS_0245 NC_010634.1 Protein Homology CDS 267562 268263 . + 0 ID=cds245;Parent=gene255;Dbxref=Genbank:WP_002211512.1;Name=WP_002211512.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211512.1;transl_table=11 NC_010634.1 RefSeq gene 268491 268952 . + . ID=gene256;Name=YPTS_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01285;old_locus_tag=YPTS_0246 NC_010634.1 Protein Homology CDS 268491 268952 . + 0 ID=cds246;Parent=gene256;Dbxref=Genbank:WP_011191525.1;Name=WP_011191525.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191525.1;transl_table=11 NC_010634.1 RefSeq gene 269067 270173 . - . ID=gene257;Name=YPTS_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01290;old_locus_tag=YPTS_0247 NC_010634.1 Protein Homology CDS 269067 270173 . - 0 ID=cds247;Parent=gene257;Dbxref=Genbank:WP_011191526.1;Name=WP_011191526.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191526.1;transl_table=11 NC_010634.1 RefSeq gene 270286 270804 . - . ID=gene258;Name=YPTS_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01295;old_locus_tag=YPTS_0248 NC_010634.1 Protein Homology CDS 270286 270804 . - 0 ID=cds248;Parent=gene258;Dbxref=Genbank:WP_011191527.1;Name=WP_011191527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191527.1;transl_table=11 NC_010634.1 RefSeq gene 270866 271513 . - . ID=gene259;Name=YPTS_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01300;old_locus_tag=YPTS_0249 NC_010634.1 Protein Homology CDS 270866 271513 . - 0 ID=cds249;Parent=gene259;Dbxref=Genbank:WP_011191528.1;Name=WP_011191528.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191528.1;transl_table=11 NC_010634.1 RefSeq gene 271485 272171 . - . ID=gene260;Name=YPTS_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01305;old_locus_tag=YPTS_0250 NC_010634.1 Protein Homology CDS 271485 272171 . - 0 ID=cds250;Parent=gene260;Dbxref=Genbank:WP_011191529.1;Name=WP_011191529.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_011191529.1;transl_table=11 NC_010634.1 RefSeq gene 272189 274522 . - . ID=gene261;Name=YPTS_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01310;old_locus_tag=YPTS_0251 NC_010634.1 Protein Homology CDS 272189 274522 . - 0 ID=cds251;Parent=gene261;Dbxref=Genbank:WP_011191530.1;Name=WP_011191530.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191530.1;transl_table=11 NC_010634.1 RefSeq gene 274789 275280 . - . ID=gene262;Name=YPTS_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01315;old_locus_tag=YPTS_0252 NC_010634.1 Protein Homology CDS 274789 275280 . - 0 ID=cds252;Parent=gene262;Dbxref=Genbank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228181.1;transl_table=11 NC_010634.1 RefSeq gene 275835 277154 . + . ID=gene263;Name=YPTS_RS01320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS01320;pseudo=true NC_010634.1 Protein Homology CDS 275835 277154 . + 0 ID=cds253;Parent=gene263;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=glycerol-3-phosphate ABC transporter substrate-binding protein;pseudo=true;transl_except=(pos:275994..275996%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 277452 278339 . + . ID=gene264;Name=YPTS_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01325;old_locus_tag=YPTS_0255 NC_010634.1 Protein Homology CDS 277452 278339 . + 0 ID=cds254;Parent=gene264;Dbxref=Genbank:WP_012104337.1;Name=WP_012104337.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_012104337.1;transl_table=11 NC_010634.1 RefSeq gene 278336 279181 . + . ID=gene265;Name=YPTS_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01330;old_locus_tag=YPTS_0256 NC_010634.1 Protein Homology CDS 278336 279181 . + 0 ID=cds255;Parent=gene265;Dbxref=Genbank:WP_012413423.1;Name=WP_012413423.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=glycerol-3-phosphate transporter membrane protein;protein_id=WP_012413423.1;transl_table=11 NC_010634.1 RefSeq gene 279188 280261 . + . ID=gene266;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YPTS_RS01335;old_locus_tag=YPTS_0257 NC_010634.1 Protein Homology CDS 279188 280261 . + 0 ID=cds256;Parent=gene266;Dbxref=Genbank:WP_011191533.1;Name=WP_011191533.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_011191533.1;transl_table=11 NC_010634.1 RefSeq gene 280258 281007 . + . ID=gene267;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YPTS_RS01340;old_locus_tag=YPTS_0258 NC_010634.1 Protein Homology CDS 280258 281007 . + 0 ID=cds257;Parent=gene267;Dbxref=Genbank:WP_011191534.1;Name=WP_011191534.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_011191534.1;transl_table=11 NC_010634.1 RefSeq gene 281108 282064 . + . ID=gene268;Name=YPTS_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01345;old_locus_tag=YPTS_0259 NC_010634.1 Protein Homology CDS 281108 282064 . + 0 ID=cds258;Parent=gene268;Dbxref=Genbank:WP_012413424.1;Name=WP_012413424.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413424.1;transl_table=11 NC_010634.1 RefSeq gene 282201 282869 . + . ID=gene269;Name=YPTS_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01350;old_locus_tag=YPTS_0260 NC_010634.1 Protein Homology CDS 282201 282869 . + 0 ID=cds259;Parent=gene269;Dbxref=Genbank:WP_011191535.1;Name=WP_011191535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191535.1;transl_table=11 NC_010634.1 RefSeq gene 282882 284084 . + . ID=gene270;Name=YPTS_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01355;old_locus_tag=YPTS_0261 NC_010634.1 Protein Homology CDS 282882 284084 . + 0 ID=cds260;Parent=gene270;Dbxref=Genbank:WP_011191536.1;Name=WP_011191536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191536.1;transl_table=11 NC_010634.1 RefSeq gene 284291 285190 . + . ID=gene271;Name=YPTS_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01360;old_locus_tag=YPTS_0262 NC_010634.1 Protein Homology CDS 284291 285190 . + 0 ID=cds261;Parent=gene271;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11 NC_010634.1 RefSeq gene 285078 286031 . - . ID=gene272;Name=YPTS_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01365;old_locus_tag=YPTS_0263 NC_010634.1 Protein Homology CDS 285078 286031 . - 0 ID=cds262;Parent=gene272;Dbxref=Genbank:WP_011191537.1;Name=WP_011191537.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191537.1;transl_table=11 NC_010634.1 RefSeq gene 286122 288413 . + . ID=gene273;Name=YPTS_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01370;old_locus_tag=YPTS_0264 NC_010634.1 Protein Homology CDS 286122 288413 . + 0 ID=cds263;Parent=gene273;Dbxref=Genbank:WP_012304714.1;Name=WP_012304714.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_012304714.1;transl_table=11 NC_010634.1 RefSeq gene 288468 289340 . - . ID=gene274;Name=YPTS_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01375;old_locus_tag=YPTS_0265 NC_010634.1 Protein Homology CDS 288468 289340 . - 0 ID=cds264;Parent=gene274;Dbxref=Genbank:WP_012413425.1;Name=WP_012413425.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_012413425.1;transl_table=11 NC_010634.1 RefSeq gene 289768 290529 . + . ID=gene275;Name=YPTS_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01380;old_locus_tag=YPTS_0266 NC_010634.1 Protein Homology CDS 289768 290529 . + 0 ID=cds265;Parent=gene275;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NC_010634.1 RefSeq gene 290650 291495 . + . ID=gene276;Name=YPTS_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01385;old_locus_tag=YPTS_0267 NC_010634.1 Protein Homology CDS 290650 291495 . + 0 ID=cds266;Parent=gene276;Dbxref=Genbank:WP_012413426.1;Name=WP_012413426.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_012413426.1;transl_table=11 NC_010634.1 RefSeq gene 291859 293670 . + . ID=gene277;Name=YPTS_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01390;old_locus_tag=YPTS_0268 NC_010634.1 Protein Homology CDS 291859 293670 . + 0 ID=cds267;Parent=gene277;Dbxref=Genbank:WP_002211530.1;Name=WP_002211530.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_002211530.1;transl_table=11 NC_010634.1 RefSeq repeat_region 293772 294074 . + . ID=id23;gbkey=repeat_region NC_010634.1 RefSeq gene 294190 294720 . + . ID=gene278;Name=YPTS_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01395;old_locus_tag=YPTS_0269 NC_010634.1 Protein Homology CDS 294190 294720 . + 0 ID=cds268;Parent=gene278;Dbxref=Genbank:WP_011191541.1;Name=WP_011191541.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_011191541.1;transl_table=11 NC_010634.1 RefSeq gene 294928 296433 . + . ID=gene279;Name=YPTS_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01400;old_locus_tag=YPTS_0270 NC_010634.1 Protein Homology CDS 294928 296433 . + 0 ID=cds269;Parent=gene279;Dbxref=Genbank:WP_002211532.1;Name=WP_002211532.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_002211532.1;transl_table=11 NC_010634.1 RefSeq gene 296525 297280 . + . ID=gene280;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YPTS_RS01405;old_locus_tag=YPTS_0271 NC_010634.1 Protein Homology CDS 296525 297280 . + 0 ID=cds270;Parent=gene280;Dbxref=Genbank:WP_002224024.1;Name=WP_002224024.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002224024.1;transl_table=11 NC_010634.1 RefSeq gene 297294 297944 . + . ID=gene281;Name=YPTS_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01410;old_locus_tag=YPTS_0272 NC_010634.1 Protein Homology CDS 297294 297944 . + 0 ID=cds271;Parent=gene281;Dbxref=Genbank:WP_002215928.1;Name=WP_002215928.1;gbkey=CDS;product=sterol-binding protein;protein_id=WP_002215928.1;transl_table=11 NC_010634.1 RefSeq gene 297944 299575 . + . ID=gene282;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=YPTS_RS01415;old_locus_tag=YPTS_0273 NC_010634.1 Protein Homology CDS 297944 299575 . + 0 ID=cds272;Parent=gene282;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11 NC_010634.1 RefSeq gene 299755 300021 . + . ID=gene283;Name=YPTS_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01420;old_locus_tag=YPTS_0274 NC_010634.1 Protein Homology CDS 299755 300021 . + 0 ID=cds273;Parent=gene283;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11 NC_010634.1 RefSeq gene 300025 300687 . + . ID=gene284;Name=YPTS_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01425;old_locus_tag=YPTS_0275 NC_010634.1 Protein Homology CDS 300025 300687 . + 0 ID=cds274;Parent=gene284;Dbxref=Genbank:WP_011191542.1;Name=WP_011191542.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_011191542.1;transl_table=11 NC_010634.1 RefSeq gene 300690 301466 . + . ID=gene285;Name=YPTS_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01430;old_locus_tag=YPTS_0276 NC_010634.1 Protein Homology CDS 300690 301466 . + 0 ID=cds275;Parent=gene285;Dbxref=Genbank:WP_011191543.1;Name=WP_011191543.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_011191543.1;transl_table=11 NC_010634.1 RefSeq gene 301522 302304 . + . ID=gene286;Name=YPTS_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01435;old_locus_tag=YPTS_0277 NC_010634.1 Protein Homology CDS 301522 302304 . + 0 ID=cds276;Parent=gene286;Dbxref=Genbank:WP_011191544.1;Name=WP_011191544.1;Note=magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system;gbkey=CDS;product=DNase TatD;protein_id=WP_011191544.1;transl_table=11 NC_010634.1 RefSeq gene 302319 303341 . + . ID=gene287;Name=YPTS_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01440;old_locus_tag=YPTS_0278 NC_010634.1 Protein Homology CDS 302319 303341 . + 0 ID=cds277;Parent=gene287;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11 NC_010634.1 RefSeq gene 303451 303939 . - . ID=gene288;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YPTS_RS01445;old_locus_tag=YPTS_0279 NC_010634.1 Protein Homology CDS 303451 303939 . - 0 ID=cds278;Parent=gene288;Dbxref=Genbank:WP_011191545.1;Name=WP_011191545.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_011191545.1;transl_table=11 NC_010634.1 RefSeq gene 304187 305683 . + . ID=gene289;Name=YPTS_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01450;old_locus_tag=YPTS_0280 NC_010634.1 Protein Homology CDS 304187 305683 . + 0 ID=cds279;Parent=gene289;Dbxref=Genbank:WP_011191546.1;Name=WP_011191546.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_011191546.1;transl_table=11 NC_010634.1 RefSeq gene 305738 306439 . + . ID=gene290;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=YPTS_RS01455;old_locus_tag=YPTS_0281 NC_010634.1 Protein Homology CDS 305738 306439 . + 0 ID=cds280;Parent=gene290;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11 NC_010634.1 RefSeq gene 306599 307762 . - . ID=gene291;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YPTS_RS01460;old_locus_tag=YPTS_0282 NC_010634.1 Protein Homology CDS 306599 307762 . - 0 ID=cds281;Parent=gene291;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11 NC_010634.1 RefSeq gene 307774 309963 . - . ID=gene292;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YPTS_RS01465;old_locus_tag=YPTS_0283 NC_010634.1 Protein Homology CDS 307774 309963 . - 0 ID=cds282;Parent=gene292;Dbxref=Genbank:WP_011191547.1;Name=WP_011191547.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_011191547.1;transl_table=11 NC_010634.1 RefSeq gene 310290 311621 . + . ID=gene293;Name=YPTS_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01470;old_locus_tag=YPTS_0284 NC_010634.1 Protein Homology CDS 310290 311621 . + 0 ID=cds283;Parent=gene293;Dbxref=Genbank:WP_011191548.1;Name=WP_011191548.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_011191548.1;transl_table=11 NC_010634.1 RefSeq gene 311621 312232 . + . ID=gene294;Name=YPTS_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01475;old_locus_tag=YPTS_0285 NC_010634.1 Protein Homology CDS 311621 312232 . + 0 ID=cds284;Parent=gene294;Dbxref=Genbank:WP_002231137.1;Name=WP_002231137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231137.1;transl_table=11 NC_010634.1 RefSeq gene 312272 313723 . + . ID=gene295;Name=YPTS_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01480;old_locus_tag=YPTS_0286 NC_010634.1 Protein Homology CDS 312272 313723 . + 0 ID=cds285;Parent=gene295;Dbxref=Genbank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;product=potassium transporter;protein_id=WP_002211550.1;transl_table=11 NC_010634.1 RefSeq gene 313745 314278 . + . ID=gene296;Name=YPTS_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01485;old_locus_tag=YPTS_0287 NC_010634.1 Protein Homology CDS 313745 314278 . + 0 ID=cds286;Parent=gene296;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11 NC_010634.1 RefSeq repeat_region 314304 320028 . + . ID=id24;gbkey=repeat_region NC_010634.1 RefSeq gene 314750 316298 . + . ID=gene297;Name=YPTS_RS01495;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS01495;old_locus_tag=YPTS_R0086 NC_010634.1 RefSeq rRNA 314750 316298 . + . ID=rna10;Parent=gene297;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq exon 314750 316298 . + . ID=id25;Parent=rna10;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq gene 316398 316474 . + . ID=gene298;Name=YPTS_RS01500;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01500;old_locus_tag=YPTS_R0008 NC_010634.1 tRNAscan-SE tRNA 316398 316474 . + . ID=rna11;Parent=gene298;anticodon=(pos:316432..316434);gbkey=tRNA;product=tRNA-Ile NC_010634.1 tRNAscan-SE exon 316398 316474 . + . ID=id26;Parent=rna11;anticodon=(pos:316432..316434);gbkey=tRNA;product=tRNA-Ile NC_010634.1 RefSeq gene 316526 316601 . + . ID=gene299;Name=YPTS_RS01505;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01505;old_locus_tag=YPTS_R0009 NC_010634.1 tRNAscan-SE tRNA 316526 316601 . + . ID=rna12;Parent=gene299;anticodon=(pos:316559..316561);gbkey=tRNA;product=tRNA-Ala NC_010634.1 tRNAscan-SE exon 316526 316601 . + . ID=id27;Parent=rna12;anticodon=(pos:316559..316561);gbkey=tRNA;product=tRNA-Ala NC_010634.1 RefSeq gene 316811 319744 . + . ID=gene300;Name=YPTS_RS01510;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS01510;old_locus_tag=YPTS_R0093 NC_010634.1 RefSeq rRNA 316811 319744 . + . ID=rna13;Parent=gene300;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq exon 316811 319744 . + . ID=id28;Parent=rna13;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq gene 319837 319952 . + . ID=gene301;Name=YPTS_RS01515;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS01515;old_locus_tag=YPTS_R0099 NC_010634.1 cmsearch rRNA 319837 319952 . + . ID=rna14;Parent=gene301;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 319837 319952 . + . ID=id29;Parent=rna14;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 320416 321453 . + . ID=gene302;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YPTS_RS01520;old_locus_tag=YPTS_0290 NC_010634.1 Protein Homology CDS 320416 321453 . + 0 ID=cds287;Parent=gene302;Dbxref=Genbank:WP_011191549.1;Name=WP_011191549.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_011191549.1;transl_table=11 NC_010634.1 RefSeq gene 321450 322409 . + . ID=gene303;Name=YPTS_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01525;old_locus_tag=YPTS_0291 NC_010634.1 Protein Homology CDS 321450 322409 . + 0 ID=cds288;Parent=gene303;Dbxref=Genbank:WP_011191550.1;Name=WP_011191550.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_011191550.1;transl_table=11 NC_010634.1 RefSeq gene 322444 323394 . - . ID=gene304;Name=YPTS_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01530;old_locus_tag=YPTS_0292 NC_010634.1 Protein Homology CDS 322444 323394 . - 0 ID=cds289;Parent=gene304;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NC_010634.1 RefSeq gene 323605 324156 . - . ID=gene305;Name=YPTS_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01535;old_locus_tag=YPTS_0293 NC_010634.1 Protein Homology CDS 323605 324156 . - 0 ID=cds290;Parent=gene305;Dbxref=Genbank:WP_011191551.1;Name=WP_011191551.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_011191551.1;transl_table=11 NC_010634.1 RefSeq gene 324552 324627 . + . ID=gene306;Name=YPTS_RS01540;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01540;old_locus_tag=YPTS_R0010 NC_010634.1 tRNAscan-SE tRNA 324552 324627 . + . ID=rna15;Parent=gene306;anticodon=(pos:324585..324587);gbkey=tRNA;product=tRNA-Thr NC_010634.1 tRNAscan-SE exon 324552 324627 . + . ID=id30;Parent=rna15;anticodon=(pos:324585..324587);gbkey=tRNA;product=tRNA-Thr NC_010634.1 RefSeq gene 324646 324730 . + . ID=gene307;Name=YPTS_RS01545;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01545;old_locus_tag=YPTS_R0011 NC_010634.1 tRNAscan-SE tRNA 324646 324730 . + . ID=rna16;Parent=gene307;anticodon=(pos:324680..324682);gbkey=tRNA;product=tRNA-Tyr NC_010634.1 tRNAscan-SE exon 324646 324730 . + . ID=id31;Parent=rna16;anticodon=(pos:324680..324682);gbkey=tRNA;product=tRNA-Tyr NC_010634.1 RefSeq gene 324880 324954 . + . ID=gene308;Name=YPTS_RS01550;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01550;old_locus_tag=YPTS_R0012 NC_010634.1 tRNAscan-SE tRNA 324880 324954 . + . ID=rna17;Parent=gene308;anticodon=(pos:324913..324915);gbkey=tRNA;product=tRNA-Gly NC_010634.1 tRNAscan-SE exon 324880 324954 . + . ID=id32;Parent=rna17;anticodon=(pos:324913..324915);gbkey=tRNA;product=tRNA-Gly NC_010634.1 RefSeq gene 324961 325036 . + . ID=gene309;Name=YPTS_RS01555;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01555;old_locus_tag=YPTS_R0013 NC_010634.1 tRNAscan-SE tRNA 324961 325036 . + . ID=rna18;Parent=gene309;anticodon=(pos:324994..324996);gbkey=tRNA;product=tRNA-Thr NC_010634.1 tRNAscan-SE exon 324961 325036 . + . ID=id33;Parent=rna18;anticodon=(pos:324994..324996);gbkey=tRNA;product=tRNA-Thr NC_010634.1 RefSeq gene 325145 326329 . + . ID=gene310;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPTS_RS01560;old_locus_tag=YPTS_0296 NC_010634.1 Protein Homology CDS 325145 326329 . + 0 ID=cds291;Parent=gene310;Dbxref=Genbank:WP_002210669.1;Name=WP_002210669.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NC_010634.1 RefSeq gene 326580 326963 . + . ID=gene311;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=YPTS_RS01565;old_locus_tag=YPTS_0297 NC_010634.1 Protein Homology CDS 326580 326963 . + 0 ID=cds292;Parent=gene311;Dbxref=Genbank:WP_002210670.1;Name=WP_002210670.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NC_010634.1 RefSeq gene 326965 327510 . + . ID=gene312;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YPTS_RS01570;old_locus_tag=YPTS_0298 NC_010634.1 Protein Homology CDS 326965 327510 . + 0 ID=cds293;Parent=gene312;Dbxref=Genbank:WP_002210671.1;Name=WP_002210671.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NC_010634.1 RefSeq gene 327701 328129 . + . ID=gene313;Name=YPTS_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01575;old_locus_tag=YPTS_0299 NC_010634.1 Protein Homology CDS 327701 328129 . + 0 ID=cds294;Parent=gene313;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NC_010634.1 RefSeq gene 328133 328837 . + . ID=gene314;Name=YPTS_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01580;old_locus_tag=YPTS_0300 NC_010634.1 Protein Homology CDS 328133 328837 . + 0 ID=cds295;Parent=gene314;Dbxref=Genbank:WP_002210673.1;Name=WP_002210673.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NC_010634.1 RefSeq gene 329202 329699 . + . ID=gene315;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YPTS_RS01585;old_locus_tag=YPTS_0301 NC_010634.1 Protein Homology CDS 329202 329699 . + 0 ID=cds296;Parent=gene315;Dbxref=Genbank:WP_002210674.1;Name=WP_002210674.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NC_010634.1 RefSeq gene 329766 330134 . + . ID=gene316;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YPTS_RS01590;old_locus_tag=YPTS_0302 NC_010634.1 Protein Homology CDS 329766 330134 . + 0 ID=cds297;Parent=gene316;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NC_010634.1 RefSeq gene 330477 334505 . + . ID=gene317;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YPTS_RS01595;old_locus_tag=YPTS_0304 NC_010634.1 Protein Homology CDS 330477 334505 . + 0 ID=cds298;Parent=gene317;Dbxref=Genbank:WP_002210676.1;Name=WP_002210676.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002210676.1;transl_table=11 NC_010634.1 RefSeq gene 334634 338854 . + . ID=gene318;Name=YPTS_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01600;old_locus_tag=YPTS_0305 NC_010634.1 Protein Homology CDS 334634 338854 . + 0 ID=cds299;Parent=gene318;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NC_010634.1 RefSeq gene 339004 339116 . + . ID=gene319;Name=YPTS_RS01605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS01605;pseudo=true NC_010634.1 Protein Homology CDS 339004 339116 . + 0 ID=cds300;Parent=gene319;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 339159 340289 . - . ID=gene320;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YPTS_RS01610;old_locus_tag=YPTS_0306 NC_010634.1 Protein Homology CDS 339159 340289 . - 0 ID=cds301;Parent=gene320;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11 NC_010634.1 RefSeq gene 340282 341097 . - . ID=gene321;Name=YPTS_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01615;old_locus_tag=YPTS_0307 NC_010634.1 Protein Homology CDS 340282 341097 . - 0 ID=cds302;Parent=gene321;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NC_010634.1 RefSeq gene 341099 341314 . - . ID=gene322;Name=YPTS_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01620;old_locus_tag=YPTS_0308 NC_010634.1 Protein Homology CDS 341099 341314 . - 0 ID=cds303;Parent=gene322;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11 NC_010634.1 RefSeq gene 341311 342108 . - . ID=gene323;Name=YPTS_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01625;old_locus_tag=YPTS_0309 NC_010634.1 Protein Homology CDS 341311 342108 . - 0 ID=cds304;Parent=gene323;Dbxref=Genbank:WP_002210680.1;Name=WP_002210680.1;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=WP_002210680.1;transl_table=11 NC_010634.1 RefSeq gene 342098 342772 . - . ID=gene324;Name=YPTS_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01630;old_locus_tag=YPTS_0310 NC_010634.1 Protein Homology CDS 342098 342772 . - 0 ID=cds305;Parent=gene324;Dbxref=Genbank:WP_012303440.1;Name=WP_012303440.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_012303440.1;transl_table=11 NC_010634.1 RefSeq gene 342759 344804 . - . ID=gene325;Name=YPTS_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01635;old_locus_tag=YPTS_0311 NC_010634.1 Protein Homology CDS 342759 344804 . - 0 ID=cds306;Parent=gene325;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11 NC_010634.1 RefSeq gene 344797 345056 . - . ID=gene326;Name=YPTS_RS21600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS21600;pseudo=true NC_010634.1 Protein Homology CDS 344797 345056 . - 0 ID=cds307;Parent=gene326;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 345179 345688 . - . ID=gene327;Name=YPTS_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01645;old_locus_tag=YPTS_0312 NC_010634.1 Protein Homology CDS 345179 345688 . - 0 ID=cds308;Parent=gene327;Dbxref=Genbank:WP_011191553.1;Name=WP_011191553.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_011191553.1;transl_table=11 NC_010634.1 RefSeq gene 345785 346567 . + . ID=gene328;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YPTS_RS01650;old_locus_tag=YPTS_0313 NC_010634.1 Protein Homology CDS 345785 346567 . + 0 ID=cds309;Parent=gene328;Dbxref=Genbank:WP_011191554.1;Name=WP_011191554.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_011191554.1;transl_table=11 NC_010634.1 RefSeq gene 346702 347445 . + . ID=gene329;Name=YPTS_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01655;old_locus_tag=YPTS_0314 NC_010634.1 Protein Homology CDS 346702 347445 . + 0 ID=cds310;Parent=gene329;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11 NC_010634.1 RefSeq gene 347564 348631 . + . ID=gene330;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YPTS_RS01660;old_locus_tag=YPTS_0315 NC_010634.1 Protein Homology CDS 347564 348631 . + 0 ID=cds311;Parent=gene330;Dbxref=Genbank:WP_002210686.1;Name=WP_002210686.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_002210686.1;transl_table=11 NC_010634.1 RefSeq gene 348697 349401 . + . ID=gene331;Name=YPTS_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01665;old_locus_tag=YPTS_0316 NC_010634.1 Protein Homology CDS 348697 349401 . + 0 ID=cds312;Parent=gene331;Dbxref=Genbank:WP_002217884.1;Name=WP_002217884.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_002217884.1;transl_table=11 NC_010634.1 RefSeq gene 349447 350037 . + . ID=gene332;Name=YPTS_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01670;old_locus_tag=YPTS_0317 NC_010634.1 Protein Homology CDS 349447 350037 . + 0 ID=cds313;Parent=gene332;Dbxref=Genbank:WP_002230622.1;Name=WP_002230622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230622.1;transl_table=11 NC_010634.1 RefSeq gene 350226 350501 . + . ID=gene333;Name=YPTS_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01675;old_locus_tag=YPTS_0318 NC_010634.1 Protein Homology CDS 350226 350501 . + 0 ID=cds314;Parent=gene333;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11 NC_010634.1 RefSeq gene 350551 351204 . + . ID=gene334;Name=YPTS_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01680;old_locus_tag=YPTS_0319 NC_010634.1 Protein Homology CDS 350551 351204 . + 0 ID=cds315;Parent=gene334;Dbxref=Genbank:WP_012303442.1;Name=WP_012303442.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303442.1;transl_table=11 NC_010634.1 RefSeq gene 351390 352676 . - . ID=gene335;Name=YPTS_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01685;old_locus_tag=YPTS_0320 NC_010634.1 Protein Homology CDS 351390 352676 . - 0 ID=cds316;Parent=gene335;Dbxref=Genbank:WP_011191558.1;Name=WP_011191558.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_011191558.1;transl_table=11 NC_010634.1 RefSeq gene 352736 354325 . - . ID=gene336;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YPTS_RS01690;old_locus_tag=YPTS_0321 NC_010634.1 Protein Homology CDS 352736 354325 . - 0 ID=cds317;Parent=gene336;Dbxref=Genbank:WP_011191559.1;Name=WP_011191559.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_011191559.1;transl_table=11 NC_010634.1 RefSeq gene 354507 354737 . + . ID=gene337;Name=YPTS_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21605 NC_010634.1 Protein Homology CDS 354507 354737 . + 0 ID=cds318;Parent=gene337;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11 NC_010634.1 RefSeq repeat_region 354639 360464 . + . ID=id34;gbkey=repeat_region NC_010634.1 RefSeq gene 355005 356553 . + . ID=gene338;Name=YPTS_RS01700;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS01700;old_locus_tag=YPTS_R0085 NC_010634.1 RefSeq rRNA 355005 356553 . + . ID=rna19;Parent=gene338;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq exon 355005 356553 . + . ID=id35;Parent=rna19;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq gene 356687 356762 . + . ID=gene339;Name=YPTS_RS01705;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS01705;old_locus_tag=YPTS_R0014 NC_010634.1 tRNAscan-SE tRNA 356687 356762 . + . ID=rna20;Parent=gene339;anticodon=(pos:356721..356723);gbkey=tRNA;product=tRNA-Glu NC_010634.1 tRNAscan-SE exon 356687 356762 . + . ID=id36;Parent=rna20;anticodon=(pos:356721..356723);gbkey=tRNA;product=tRNA-Glu NC_010634.1 RefSeq gene 357006 359939 . + . ID=gene340;Name=YPTS_RS01710;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS01710;old_locus_tag=YPTS_R0091 NC_010634.1 RefSeq rRNA 357006 359939 . + . ID=rna21;Parent=gene340;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq exon 357006 359939 . + . ID=id37;Parent=rna21;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq gene 360031 360146 . + . ID=gene341;Name=YPTS_RS01715;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS01715;old_locus_tag=YPTS_R0100 NC_010634.1 cmsearch rRNA 360031 360146 . + . ID=rna22;Parent=gene341;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 360031 360146 . + . ID=id38;Parent=rna22;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 360547 360813 . + . ID=gene342;Name=YPTS_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01720;old_locus_tag=YPTS_0325 NC_010634.1 Protein Homology CDS 360547 360813 . + 0 ID=cds319;Parent=gene342;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_010634.1 RefSeq gene 360819 361646 . + . ID=gene343;Name=YPTS_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01725;old_locus_tag=YPTS_0326 NC_010634.1 Protein Homology CDS 360819 361646 . + 0 ID=cds320;Parent=gene343;Dbxref=Genbank:WP_032467102.1;Name=WP_032467102.1;gbkey=CDS;product=transposase;protein_id=WP_032467102.1;transl_table=11 NC_010634.1 RefSeq repeat_region 361973 363928 . + . ID=id39;gbkey=repeat_region NC_010634.1 RefSeq gene 362039 362818 . - . ID=gene344;Name=YPTS_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01730;old_locus_tag=YPTS_0327 NC_010634.1 Protein Homology CDS 362039 362818 . - 0 ID=cds321;Parent=gene344;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_010634.1 RefSeq gene 362818 363840 . - . ID=gene345;Name=YPTS_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01735;old_locus_tag=YPTS_0328 NC_010634.1 Protein Homology CDS 362818 363840 . - 0 ID=cds322;Parent=gene345;Dbxref=Genbank:WP_012413427.1;Name=WP_012413427.1;gbkey=CDS;product=transposase;protein_id=WP_012413427.1;transl_table=11 NC_010634.1 RefSeq gene 364000 365157 . + . ID=gene346;Name=YPTS_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01740;old_locus_tag=YPTS_0329 NC_010634.1 Protein Homology CDS 364000 365157 . + 0 ID=cds323;Parent=gene346;Dbxref=Genbank:WP_011191561.1;Name=WP_011191561.1;gbkey=CDS;product=hydrolase;protein_id=WP_011191561.1;transl_table=11 NC_010634.1 RefSeq gene 365231 366886 . - . ID=gene347;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YPTS_RS01745;old_locus_tag=YPTS_0330 NC_010634.1 Protein Homology CDS 365231 366886 . - 0 ID=cds324;Parent=gene347;Dbxref=Genbank:WP_011191562.1;Name=WP_011191562.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_011191562.1;transl_table=11 NC_010634.1 RefSeq gene 366883 367194 . - . ID=gene348;Name=YPTS_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01750;old_locus_tag=YPTS_0331 NC_010634.1 Protein Homology CDS 366883 367194 . - 0 ID=cds325;Parent=gene348;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11 NC_010634.1 RefSeq gene 367251 369209 . - . ID=gene349;Name=YPTS_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01755;old_locus_tag=YPTS_0332 NC_010634.1 Protein Homology CDS 367251 369209 . - 0 ID=cds326;Parent=gene349;Dbxref=Genbank:WP_011191563.1;Name=WP_011191563.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_011191563.1;transl_table=11 NC_010634.1 RefSeq gene 370064 371380 . + . ID=gene350;Name=YPTS_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01760;old_locus_tag=YPTS_0333 NC_010634.1 Protein Homology CDS 370064 371380 . + 0 ID=cds327;Parent=gene350;Dbxref=Genbank:WP_012413428.1;Name=WP_012413428.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_012413428.1;transl_table=11 NC_010634.1 RefSeq gene 371558 372190 . - . ID=gene351;Name=YPTS_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01765;old_locus_tag=YPTS_0334 NC_010634.1 Protein Homology CDS 371558 372190 . - 0 ID=cds328;Parent=gene351;Dbxref=Genbank:WP_011191565.1;Name=WP_011191565.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191565.1;transl_table=11 NC_010634.1 RefSeq gene 372203 375022 . - . ID=gene352;Name=YPTS_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01770;old_locus_tag=YPTS_0335 NC_010634.1 Protein Homology CDS 372203 375022 . - 0 ID=cds329;Parent=gene352;Dbxref=Genbank:WP_011191566.1;Name=WP_011191566.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_011191566.1;transl_table=11 NC_010634.1 RefSeq gene 375267 376766 . + . ID=gene353;Name=YPTS_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01775;old_locus_tag=YPTS_0336 NC_010634.1 Protein Homology CDS 375267 376766 . + 0 ID=cds330;Parent=gene353;Dbxref=Genbank:WP_032466605.1;Name=WP_032466605.1;gbkey=CDS;product=outer membrane secretin SsaC;protein_id=WP_032466605.1;transl_table=11 NC_010634.1 RefSeq gene 376768 377979 . + . ID=gene354;Name=YPTS_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01780;old_locus_tag=YPTS_0337 NC_010634.1 Protein Homology CDS 376768 377979 . + 0 ID=cds331;Parent=gene354;Dbxref=Genbank:WP_012413429.1;Name=WP_012413429.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_012413429.1;transl_table=11 NC_010634.1 RefSeq gene 377998 378219 . + . ID=gene355;Name=YPTS_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01785;old_locus_tag=YPTS_0338 NC_010634.1 Protein Homology CDS 377998 378219 . + 0 ID=cds332;Parent=gene355;Dbxref=Genbank:WP_011191569.1;Name=WP_011191569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191569.1;transl_table=11 NC_010634.1 RefSeq gene 378326 379033 . + . ID=gene356;Name=YPTS_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01790;old_locus_tag=YPTS_0339 NC_010634.1 Protein Homology CDS 378326 379033 . + 0 ID=cds333;Parent=gene356;Dbxref=Genbank:WP_011171760.1;Name=WP_011171760.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011171760.1;transl_table=11 NC_010634.1 RefSeq gene 379043 379258 . + . ID=gene357;Name=YPTS_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01795;old_locus_tag=YPTS_0340 NC_010634.1 Protein Homology CDS 379043 379258 . + 0 ID=cds334;Parent=gene357;Dbxref=Genbank:WP_011191571.1;Name=WP_011191571.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_011191571.1;transl_table=11 NC_010634.1 RefSeq gene 379255 379503 . + . ID=gene358;Name=YPTS_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01800;old_locus_tag=YPTS_0341 NC_010634.1 Protein Homology CDS 379255 379503 . + 0 ID=cds335;Parent=gene358;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11 NC_010634.1 RefSeq gene 379601 379852 . + . ID=gene359;Name=YPTS_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01805;old_locus_tag=YPTS_0342 NC_010634.1 Protein Homology CDS 379601 379852 . + 0 ID=cds336;Parent=gene359;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11 NC_010634.1 RefSeq gene 379849 380580 . + . ID=gene360;Name=YPTS_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01810;old_locus_tag=YPTS_0343 NC_010634.1 Protein Homology CDS 379849 380580 . + 0 ID=cds337;Parent=gene360;Dbxref=Genbank:WP_011191572.1;Name=WP_011191572.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_011191572.1;transl_table=11 NC_010634.1 RefSeq gene 380755 381348 . + . ID=gene361;Name=YPTS_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01815;old_locus_tag=YPTS_0344 NC_010634.1 Protein Homology CDS 380755 381348 . + 0 ID=cds338;Parent=gene361;Dbxref=Genbank:WP_012413430.1;Name=WP_012413430.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413430.1;transl_table=11 NC_010634.1 RefSeq gene 381345 381992 . + . ID=gene362;Name=YPTS_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01820;old_locus_tag=YPTS_0345 NC_010634.1 Protein Homology CDS 381345 381992 . + 0 ID=cds339;Parent=gene362;Dbxref=Genbank:WP_012413431.1;Name=WP_012413431.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_012413431.1;transl_table=11 NC_010634.1 RefSeq gene 381979 384033 . + . ID=gene363;Name=YPTS_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01825;old_locus_tag=YPTS_0346 NC_010634.1 Protein Homology CDS 381979 384033 . + 0 ID=cds340;Parent=gene363;Dbxref=Genbank:WP_042592919.1;Name=WP_042592919.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_042592919.1;transl_table=11 NC_010634.1 RefSeq gene 384020 385357 . + . ID=gene364;Name=YPTS_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01830;old_locus_tag=YPTS_0347 NC_010634.1 Protein Homology CDS 384020 385357 . + 0 ID=cds341;Parent=gene364;Dbxref=Genbank:WP_002209046.1;Name=WP_002209046.1;gbkey=CDS;product=type III secretion system ATPase;protein_id=WP_002209046.1;transl_table=11 NC_010634.1 RefSeq gene 385354 385755 . + . ID=gene365;Name=YPTS_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01835;old_locus_tag=YPTS_0348 NC_010634.1 Protein Homology CDS 385354 385755 . + 0 ID=cds342;Parent=gene365;Dbxref=Genbank:WP_024063523.1;Name=WP_024063523.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063523.1;transl_table=11 NC_010634.1 RefSeq gene 385736 386134 . + . ID=gene366;Name=YPTS_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01840;old_locus_tag=YPTS_0349 NC_010634.1 Protein Homology CDS 385736 386134 . + 0 ID=cds343;Parent=gene366;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NC_010634.1 RefSeq gene 386112 387074 . + . ID=gene367;Name=YPTS_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01845;old_locus_tag=YPTS_0350 NC_010634.1 Protein Homology CDS 386112 387074 . + 0 ID=cds344;Parent=gene367;Dbxref=Genbank:WP_012413433.1;Name=WP_012413433.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_012413433.1;transl_table=11 NC_010634.1 RefSeq gene 387201 387851 . + . ID=gene368;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPTS_RS01850;old_locus_tag=YPTS_0351 NC_010634.1 Protein Homology CDS 387201 387851 . + 0 ID=cds345;Parent=gene368;Dbxref=Genbank:WP_002221023.1;Name=WP_002221023.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=flagellar biosynthesis protein FliP;protein_id=WP_002221023.1;transl_table=11 NC_010634.1 RefSeq gene 387848 388141 . + . ID=gene369;Name=YPTS_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01855;old_locus_tag=YPTS_0352 NC_010634.1 Protein Homology CDS 387848 388141 . + 0 ID=cds346;Parent=gene369;Dbxref=Genbank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_002209051.1;transl_table=11 NC_010634.1 RefSeq gene 388143 388937 . + . ID=gene370;Name=YPTS_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01860;old_locus_tag=YPTS_0353 NC_010634.1 Protein Homology CDS 388143 388937 . + 0 ID=cds347;Parent=gene370;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11 NC_010634.1 RefSeq gene 388927 389994 . + . ID=gene371;Name=YPTS_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01865;old_locus_tag=YPTS_0354 NC_010634.1 Protein Homology CDS 388927 389994 . + 0 ID=cds348;Parent=gene371;Dbxref=Genbank:WP_011191577.1;Name=WP_011191577.1;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_011191577.1;transl_table=11 NC_010634.1 RefSeq gene 390190 391404 . + . ID=gene372;Name=YPTS_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01870;old_locus_tag=YPTS_0355 NC_010634.1 Protein Homology CDS 390190 391404 . + 0 ID=cds349;Parent=gene372;Dbxref=Genbank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209054.1;transl_table=11 NC_010634.1 RefSeq gene 391401 391670 . + . ID=gene373;Name=YPTS_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01875;old_locus_tag=YPTS_0356 NC_010634.1 Protein Homology CDS 391401 391670 . + 0 ID=cds350;Parent=gene373;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11 NC_010634.1 RefSeq gene 391748 392731 . - . ID=gene374;Name=YPTS_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01880;old_locus_tag=YPTS_0357 NC_010634.1 Protein Homology CDS 391748 392731 . - 0 ID=cds351;Parent=gene374;Dbxref=Genbank:WP_012413434.1;Name=WP_012413434.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012413434.1;transl_table=11 NC_010634.1 RefSeq gene 392901 394187 . + . ID=gene375;Name=YPTS_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01885;old_locus_tag=YPTS_0358 NC_010634.1 Protein Homology CDS 392901 394187 . + 0 ID=cds352;Parent=gene375;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11 NC_010634.1 RefSeq gene 394233 395414 . + . ID=gene376;Name=YPTS_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01890;old_locus_tag=YPTS_0359 NC_010634.1 Protein Homology CDS 394233 395414 . + 0 ID=cds353;Parent=gene376;Dbxref=Genbank:WP_002215044.1;Name=WP_002215044.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002215044.1;transl_table=11 NC_010634.1 RefSeq gene 395555 396355 . - . ID=gene377;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=YPTS_RS01895;old_locus_tag=YPTS_0360 NC_010634.1 Protein Homology CDS 395555 396355 . - 0 ID=cds354;Parent=gene377;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11 NC_010634.1 RefSeq gene 396348 397352 . - . ID=gene378;Name=YPTS_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01900;old_locus_tag=YPTS_0361 NC_010634.1 Protein Homology CDS 396348 397352 . - 0 ID=cds355;Parent=gene378;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NC_010634.1 RefSeq gene 397349 398188 . - . ID=gene379;Name=YPTS_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01905;old_locus_tag=YPTS_0362 NC_010634.1 Protein Homology CDS 397349 398188 . - 0 ID=cds356;Parent=gene379;Dbxref=Genbank:WP_012413435.1;Name=WP_012413435.1;gbkey=CDS;product=hemin ABC transporter substrate-binding protein;protein_id=WP_012413435.1;transl_table=11 NC_010634.1 RefSeq gene 398185 399222 . - . ID=gene380;Name=YPTS_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01910;old_locus_tag=YPTS_0363 NC_010634.1 Protein Homology CDS 398185 399222 . - 0 ID=cds357;Parent=gene380;Dbxref=Genbank:WP_002209061.1;Name=WP_002209061.1;gbkey=CDS;product=hemin transporter HmuS;protein_id=WP_002209061.1;transl_table=11 NC_010634.1 RefSeq gene 399341 401371 . - . ID=gene381;Name=YPTS_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01915;old_locus_tag=YPTS_0364 NC_010634.1 Protein Homology CDS 399341 401371 . - 0 ID=cds358;Parent=gene381;Dbxref=Genbank:WP_011191580.1;Name=WP_011191580.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_011191580.1;transl_table=11 NC_010634.1 RefSeq gene 401370 401663 . + . ID=gene382;Name=YPTS_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01920 NC_010634.1 GeneMarkS+ CDS 401370 401663 . + 0 ID=cds359;Parent=gene382;Dbxref=Genbank:WP_032466020.1;Name=WP_032466020.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466020.1;transl_table=11 NC_010634.1 RefSeq gene 401779 402429 . - . ID=gene383;Name=YPTS_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01925;old_locus_tag=YPTS_0366 NC_010634.1 Protein Homology CDS 401779 402429 . - 0 ID=cds360;Parent=gene383;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11 NC_010634.1 RefSeq gene 402463 402990 . - . ID=gene384;Name=YPTS_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01930;old_locus_tag=YPTS_0367 NC_010634.1 Protein Homology CDS 402463 402990 . - 0 ID=cds361;Parent=gene384;Dbxref=Genbank:WP_032466021.1;Name=WP_032466021.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_032466021.1;transl_table=11 NC_010634.1 RefSeq gene 403023 404336 . - . ID=gene385;Name=YPTS_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01935;old_locus_tag=YPTS_0368 NC_010634.1 Protein Homology CDS 403023 404336 . - 0 ID=cds362;Parent=gene385;Dbxref=Genbank:WP_012105844.1;Name=WP_012105844.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=heme utilization radical SAM enzyme HutW;protein_id=WP_012105844.1;transl_table=11 NC_010634.1 RefSeq gene 404677 405477 . - . ID=gene386;Name=YPTS_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01940;old_locus_tag=YPTS_0369 NC_010634.1 Protein Homology CDS 404677 405477 . - 0 ID=cds363;Parent=gene386;Dbxref=Genbank:WP_011191584.1;Name=WP_011191584.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_011191584.1;transl_table=11 NC_010634.1 RefSeq gene 405792 406280 . - . ID=gene387;Name=YPTS_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01945;old_locus_tag=YPTS_0370 NC_010634.1 Protein Homology CDS 405792 406280 . - 0 ID=cds364;Parent=gene387;Dbxref=Genbank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NC_010634.1 RefSeq gene 406677 407636 . - . ID=gene388;Name=YPTS_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01950;old_locus_tag=YPTS_0371 NC_010634.1 Protein Homology CDS 406677 407636 . - 0 ID=cds365;Parent=gene388;Dbxref=Genbank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209069.1;transl_table=11 NC_010634.1 RefSeq gene 407636 408715 . - . ID=gene389;Name=YPTS_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01955;old_locus_tag=YPTS_0372 NC_010634.1 Protein Homology CDS 407636 408715 . - 0 ID=cds366;Parent=gene389;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11 NC_010634.1 RefSeq gene 408708 409520 . - . ID=gene390;Name=YPTS_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01960;old_locus_tag=YPTS_0373 NC_010634.1 Protein Homology CDS 408708 409520 . - 0 ID=cds367;Parent=gene390;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11 NC_010634.1 RefSeq gene 409513 410649 . - . ID=gene391;Name=YPTS_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01965;old_locus_tag=YPTS_0374 NC_010634.1 Protein Homology CDS 409513 410649 . - 0 ID=cds368;Parent=gene391;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11 NC_010634.1 RefSeq gene 410661 411722 . - . ID=gene392;Name=YPTS_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01970;old_locus_tag=YPTS_0375 NC_010634.1 Protein Homology CDS 410661 411722 . - 0 ID=cds369;Parent=gene392;Dbxref=Genbank:WP_011191585.1;Name=WP_011191585.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191585.1;transl_table=11 NC_010634.1 RefSeq gene 411998 412591 . + . ID=gene393;Name=YPTS_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01975;old_locus_tag=YPTS_0376 NC_010634.1 Protein Homology CDS 411998 412591 . + 0 ID=cds370;Parent=gene393;Dbxref=Genbank:WP_011191586.1;Name=WP_011191586.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_011191586.1;transl_table=11 NC_010634.1 RefSeq gene 412591 413775 . + . ID=gene394;Name=YPTS_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01980;old_locus_tag=YPTS_0377 NC_010634.1 Protein Homology CDS 412591 413775 . + 0 ID=cds371;Parent=gene394;Dbxref=Genbank:WP_011191587.1;Name=WP_011191587.1;gbkey=CDS;product=tellurium resistance protein TerA;protein_id=WP_011191587.1;transl_table=11 NC_010634.1 RefSeq gene 413808 414263 . + . ID=gene395;Name=YPTS_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01985;old_locus_tag=YPTS_0378 NC_010634.1 Protein Homology CDS 413808 414263 . + 0 ID=cds372;Parent=gene395;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11 NC_010634.1 RefSeq gene 414285 415322 . + . ID=gene396;Name=YPTS_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01990;old_locus_tag=YPTS_0379 NC_010634.1 Protein Homology CDS 414285 415322 . + 0 ID=cds373;Parent=gene396;Dbxref=Genbank:WP_011191588.1;Name=WP_011191588.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_011191588.1;transl_table=11 NC_010634.1 RefSeq gene 415386 415964 . + . ID=gene397;Name=YPTS_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS01995;old_locus_tag=YPTS_0380 NC_010634.1 Protein Homology CDS 415386 415964 . + 0 ID=cds374;Parent=gene397;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11 NC_010634.1 RefSeq gene 416148 416723 . + . ID=gene398;Name=YPTS_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02000;old_locus_tag=YPTS_0381 NC_010634.1 Protein Homology CDS 416148 416723 . + 0 ID=cds375;Parent=gene398;Dbxref=Genbank:WP_002209079.1;Name=WP_002209079.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_002209079.1;transl_table=11 NC_010634.1 RefSeq gene 417436 418074 . + . ID=gene399;Name=YPTS_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02005;old_locus_tag=YPTS_0382 NC_010634.1 Protein Homology CDS 417436 418074 . + 0 ID=cds376;Parent=gene399;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11 NC_010634.1 RefSeq gene 418325 420703 . + . ID=gene400;Name=YPTS_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02010;old_locus_tag=YPTS_0383 NC_010634.1 Protein Homology CDS 418325 420703 . + 0 ID=cds377;Parent=gene400;Dbxref=Genbank:WP_011191589.1;Name=WP_011191589.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191589.1;transl_table=11 NC_010634.1 RefSeq gene 420775 421518 . + . ID=gene401;Name=YPTS_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02015;old_locus_tag=YPTS_0384 NC_010634.1 Protein Homology CDS 420775 421518 . + 0 ID=cds378;Parent=gene401;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11 NC_010634.1 RefSeq gene 421529 421711 . + . ID=gene402;Name=YPTS_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02020;old_locus_tag=YPTS_0385 NC_010634.1 Protein Homology CDS 421529 421711 . + 0 ID=cds379;Parent=gene402;Dbxref=Genbank:WP_012304693.1;Name=WP_012304693.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304693.1;transl_table=11 NC_010634.1 RefSeq gene 422975 424294 . + . ID=gene403;Name=YPTS_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02025;old_locus_tag=YPTS_0386 NC_010634.1 Protein Homology CDS 422975 424294 . + 0 ID=cds380;Parent=gene403;Dbxref=Genbank:WP_012413436.1;Name=WP_012413436.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413436.1;transl_table=11 NC_010634.1 RefSeq gene 424811 425014 . + . ID=gene404;Name=YPTS_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02030 NC_010634.1 Protein Homology CDS 424811 425014 . + 0 ID=cds381;Parent=gene404;Dbxref=Genbank:WP_002228683.1;Name=WP_002228683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228683.1;transl_table=11 NC_010634.1 RefSeq gene 425303 427360 . + . ID=gene405;Name=YPTS_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02035;old_locus_tag=YPTS_0387 NC_010634.1 Protein Homology CDS 425303 427360 . + 0 ID=cds382;Parent=gene405;Dbxref=Genbank:WP_011191591.1;Name=WP_011191591.1;gbkey=CDS;product=FAD-binding protein;protein_id=WP_011191591.1;transl_table=11 NC_010634.1 RefSeq repeat_region 427383 427557 . + . ID=id40;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 427696 429257 . + . ID=id41;gbkey=repeat_region NC_010634.1 RefSeq gene 427704 431522 . - . ID=gene406;Name=YPTS_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02040;old_locus_tag=YPTS_0388 NC_010634.1 Protein Homology CDS 427704 431522 . - 0 ID=cds383;Parent=gene406;Dbxref=Genbank:WP_012413437.1;Name=WP_012413437.1;gbkey=CDS;product=autotransporter;protein_id=WP_012413437.1;transl_table=11 NC_010634.1 RefSeq repeat_region 429280 429810 . + . ID=id42;gbkey=repeat_region NC_010634.1 RefSeq gene 432354 432878 . + . ID=gene407;Name=YPTS_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02045;old_locus_tag=YPTS_0389 NC_010634.1 Protein Homology CDS 432354 432878 . + 0 ID=cds384;Parent=gene407;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11 NC_010634.1 RefSeq gene 433044 433910 . + . ID=gene408;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YPTS_RS02050;old_locus_tag=YPTS_0390 NC_010634.1 Protein Homology CDS 433044 433910 . + 0 ID=cds385;Parent=gene408;Dbxref=Genbank:WP_012413438.1;Name=WP_012413438.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_012413438.1;transl_table=11 NC_010634.1 RefSeq gene 434091 436586 . - . ID=gene409;Name=YPTS_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02055;old_locus_tag=YPTS_0391 NC_010634.1 Protein Homology CDS 434091 436586 . - 0 ID=cds386;Parent=gene409;Dbxref=Genbank:WP_012413439.1;Name=WP_012413439.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_012413439.1;transl_table=11 NC_010634.1 RefSeq gene 436714 437085 . + . ID=gene410;Name=YPTS_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02060;old_locus_tag=YPTS_0392 NC_010634.1 Protein Homology CDS 436714 437085 . + 0 ID=cds387;Parent=gene410;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NC_010634.1 RefSeq gene 437210 437818 . + . ID=gene411;Name=YPTS_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02065;old_locus_tag=YPTS_0393 NC_010634.1 Protein Homology CDS 437210 437818 . + 0 ID=cds388;Parent=gene411;Dbxref=Genbank:WP_002209090.1;Name=WP_002209090.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_002209090.1;transl_table=11 NC_010634.1 RefSeq gene 438013 438522 . - . ID=gene412;Name=YPTS_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02070;old_locus_tag=YPTS_0394 NC_010634.1 Protein Homology CDS 438013 438522 . - 0 ID=cds389;Parent=gene412;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11 NC_010634.1 RefSeq gene 438777 439814 . + . ID=gene413;Name=YPTS_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02075;old_locus_tag=YPTS_0395 NC_010634.1 Protein Homology CDS 438777 439814 . + 0 ID=cds390;Parent=gene413;Dbxref=Genbank:WP_011191594.1;Name=WP_011191594.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_011191594.1;transl_table=11 NC_010634.1 RefSeq gene 440330 440548 . + . ID=gene414;Name=YPTS_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02080;old_locus_tag=YPTS_0396 NC_010634.1 Protein Homology CDS 440330 440548 . + 0 ID=cds391;Parent=gene414;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11 NC_010634.1 RefSeq gene 440893 441876 . - . ID=gene415;Name=YPTS_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02085;old_locus_tag=YPTS_0397 NC_010634.1 Protein Homology CDS 440893 441876 . - 0 ID=cds392;Parent=gene415;Dbxref=Genbank:WP_011191595.1;Name=WP_011191595.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_011191595.1;transl_table=11 NC_010634.1 RefSeq gene 442208 443614 . + . ID=gene416;Name=YPTS_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02090;old_locus_tag=YPTS_0398 NC_010634.1 Protein Homology CDS 442208 443614 . + 0 ID=cds393;Parent=gene416;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NC_010634.1 RefSeq gene 443711 444790 . + . ID=gene417;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPTS_RS02095;old_locus_tag=YPTS_0399 NC_010634.1 Protein Homology CDS 443711 444790 . + 0 ID=cds394;Parent=gene417;Dbxref=Genbank:WP_011191596.1;Name=WP_011191596.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_011191596.1;transl_table=11 NC_010634.1 RefSeq gene 444976 446169 . + . ID=gene418;Name=YPTS_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02100;old_locus_tag=YPTS_0400 NC_010634.1 Protein Homology CDS 444976 446169 . + 0 ID=cds395;Parent=gene418;Dbxref=Genbank:WP_011191597.1;Name=WP_011191597.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_011191597.1;transl_table=11 NC_010634.1 RefSeq gene 446696 447055 . + . ID=gene419;Name=YPTS_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02105;old_locus_tag=YPTS_0401 NC_010634.1 Protein Homology CDS 446696 447055 . + 0 ID=cds396;Parent=gene419;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11 NC_010634.1 RefSeq gene 447148 449991 . - . ID=gene420;Name=YPTS_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02110;old_locus_tag=YPTS_0402 NC_010634.1 Protein Homology CDS 447148 449991 . - 0 ID=cds397;Parent=gene420;Dbxref=Genbank:WP_011191598.1;Name=WP_011191598.1;gbkey=CDS;product=UvrABC system protein A;protein_id=WP_011191598.1;transl_table=11 NC_010634.1 RefSeq repeat_region 450040 450222 . + . ID=id43;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 450248 450425 . + . ID=id44;gbkey=repeat_region NC_010634.1 RefSeq gene 450697 451245 . + . ID=gene421;Name=YPTS_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02115;old_locus_tag=YPTS_0403 NC_010634.1 Protein Homology CDS 450697 451245 . + 0 ID=cds398;Parent=gene421;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11 NC_010634.1 RefSeq gene 451493 451807 . - . ID=gene422;Name=YPTS_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02120;old_locus_tag=YPTS_0404 NC_010634.1 Protein Homology CDS 451493 451807 . - 0 ID=cds399;Parent=gene422;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NC_010634.1 RefSeq gene 451821 452969 . - . ID=gene423;Name=YPTS_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02125;old_locus_tag=YPTS_0405 NC_010634.1 Protein Homology CDS 451821 452969 . - 0 ID=cds400;Parent=gene423;Dbxref=Genbank:WP_011191599.1;Name=WP_011191599.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_011191599.1;transl_table=11 NC_010634.1 RefSeq gene 453036 453860 . - . ID=gene424;Name=YPTS_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02130;old_locus_tag=YPTS_0406 NC_010634.1 Protein Homology CDS 453036 453860 . - 0 ID=cds401;Parent=gene424;Dbxref=Genbank:WP_012413440.1;Name=WP_012413440.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_012413440.1;transl_table=11 NC_010634.1 RefSeq gene 453873 455129 . - . ID=gene425;Name=YPTS_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02135;old_locus_tag=YPTS_0407 NC_010634.1 Protein Homology CDS 453873 455129 . - 0 ID=cds402;Parent=gene425;Dbxref=Genbank:WP_012413441.1;Name=WP_012413441.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_012413441.1;transl_table=11 NC_010634.1 RefSeq gene 455126 456583 . - . ID=gene426;Name=YPTS_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02140;old_locus_tag=YPTS_0408 NC_010634.1 Protein Homology CDS 455126 456583 . - 0 ID=cds403;Parent=gene426;Dbxref=Genbank:WP_024063499.1;Name=WP_024063499.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_024063499.1;transl_table=11 NC_010634.1 RefSeq gene 456582 456758 . + . ID=gene427;Name=YPTS_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02145;old_locus_tag=YPTS_0409 NC_010634.1 Protein Homology CDS 456582 456758 . + 0 ID=cds404;Parent=gene427;Dbxref=Genbank:WP_012304683.1;Name=WP_012304683.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_012304683.1;transl_table=11 NC_010634.1 RefSeq gene 456755 456898 . + . ID=gene428;Name=YPTS_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02150;old_locus_tag=YPTS_0410 NC_010634.1 Protein Homology CDS 456755 456898 . + 0 ID=cds405;Parent=gene428;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11 NC_010634.1 RefSeq gene 456980 457801 . + . ID=gene429;Name=YPTS_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02155;old_locus_tag=YPTS_0411 NC_010634.1 Protein Homology CDS 456980 457801 . + 0 ID=cds406;Parent=gene429;Dbxref=Genbank:WP_011906460.1;Name=WP_011906460.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_011906460.1;transl_table=11 NC_010634.1 RefSeq gene 457934 458806 . + . ID=gene430;Name=YPTS_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02160;old_locus_tag=YPTS_0412 NC_010634.1 Protein Homology CDS 457934 458806 . + 0 ID=cds407;Parent=gene430;Dbxref=Genbank:WP_002209110.1;Name=WP_002209110.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_002209110.1;transl_table=11 NC_010634.1 RefSeq gene 458955 459989 . - . ID=gene431;Name=YPTS_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02165;old_locus_tag=YPTS_0413 NC_010634.1 Protein Homology CDS 458955 459989 . - 0 ID=cds408;Parent=gene431;Dbxref=Genbank:WP_002209111.1;Name=WP_002209111.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_002209111.1;transl_table=11 NC_010634.1 RefSeq gene 460143 460433 . + . ID=gene432;Name=YPTS_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02170;old_locus_tag=YPTS_0414 NC_010634.1 Protein Homology CDS 460143 460433 . + 0 ID=cds409;Parent=gene432;Dbxref=Genbank:WP_011191604.1;Name=WP_011191604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191604.1;transl_table=11 NC_010634.1 RefSeq gene 460869 461294 . - . ID=gene433;Name=YPTS_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02175;old_locus_tag=YPTS_0416 NC_010634.1 Protein Homology CDS 460869 461294 . - 0 ID=cds410;Parent=gene433;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11 NC_010634.1 RefSeq gene 461524 461691 . + . ID=gene434;Name=YPTS_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02180;old_locus_tag=YPTS_0418 NC_010634.1 Protein Homology CDS 461524 461691 . + 0 ID=cds411;Parent=gene434;Dbxref=Genbank:WP_002209114.1;Name=WP_002209114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209114.1;transl_table=11 NC_010634.1 RefSeq gene 461721 464276 . + . ID=gene435;Name=YPTS_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02185;old_locus_tag=YPTS_0419 NC_010634.1 Protein Homology CDS 461721 464276 . + 0 ID=cds412;Parent=gene435;Dbxref=Genbank:WP_012413443.1;Name=WP_012413443.1;gbkey=CDS;product=peptidase M60;protein_id=WP_012413443.1;transl_table=11 NC_010634.1 RefSeq gene 464710 464785 . - . ID=gene436;Name=YPTS_RS02190;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS02190;old_locus_tag=YPTS_R0083 NC_010634.1 tRNAscan-SE tRNA 464710 464785 . - . ID=rna23;Parent=gene436;anticodon=(pos:complement(464750..464752));gbkey=tRNA;product=tRNA-Phe NC_010634.1 tRNAscan-SE exon 464710 464785 . - . ID=id45;Parent=rna23;anticodon=(pos:complement(464750..464752));gbkey=tRNA;product=tRNA-Phe NC_010634.1 RefSeq gene 464930 465505 . - . ID=gene437;Name=YPTS_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02195;old_locus_tag=YPTS_0421 NC_010634.1 Protein Homology CDS 464930 465505 . - 0 ID=cds413;Parent=gene437;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NC_010634.1 RefSeq gene 465925 467940 . + . ID=gene438;Name=YPTS_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02200;old_locus_tag=YPTS_0422 NC_010634.1 Protein Homology CDS 465925 467940 . + 0 ID=cds414;Parent=gene438;Dbxref=Genbank:WP_011191607.1;Name=WP_011191607.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S-binding subunit;protein_id=WP_011191607.1;transl_table=11 NC_010634.1 RefSeq gene 467963 468520 . + . ID=gene439;Name=YPTS_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02205;old_locus_tag=YPTS_0423 NC_010634.1 Protein Homology CDS 467963 468520 . + 0 ID=cds415;Parent=gene439;Dbxref=Genbank:WP_002209119.1;Name=WP_002209119.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209119.1;transl_table=11 NC_010634.1 RefSeq gene 468543 470690 . + . ID=gene440;Name=YPTS_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02210;old_locus_tag=YPTS_0424 NC_010634.1 Protein Homology CDS 468543 470690 . + 0 ID=cds416;Parent=gene440;Dbxref=Genbank:WP_011191608.1;Name=WP_011191608.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_011191608.1;transl_table=11 NC_010634.1 RefSeq gene 470752 472539 . - . ID=gene441;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=YPTS_RS02215;old_locus_tag=YPTS_0425 NC_010634.1 Protein Homology CDS 470752 472539 . - 0 ID=cds417;Parent=gene441;Dbxref=Genbank:WP_011191609.1;Name=WP_011191609.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein DsbD;protein_id=WP_011191609.1;transl_table=11 NC_010634.1 RefSeq gene 472515 472838 . - . ID=gene442;Name=YPTS_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02220;old_locus_tag=YPTS_0426 NC_010634.1 Protein Homology CDS 472515 472838 . - 0 ID=cds418;Parent=gene442;Dbxref=Genbank:WP_002353622.1;Name=WP_002353622.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent ion tolerance protein CutA;protein_id=WP_002353622.1;transl_table=11 NC_010634.1 RefSeq gene 473059 474360 . - . ID=gene443;Name=YPTS_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02225;old_locus_tag=YPTS_0427 NC_010634.1 Protein Homology CDS 473059 474360 . - 0 ID=cds419;Parent=gene443;Dbxref=Genbank:WP_011191610.1;Name=WP_011191610.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_011191610.1;transl_table=11 NC_010634.1 RefSeq gene 474480 475916 . - . ID=gene444;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YPTS_RS02230;old_locus_tag=YPTS_0428 NC_010634.1 Protein Homology CDS 474480 475916 . - 0 ID=cds420;Parent=gene444;Dbxref=Genbank:WP_002230464.1;Name=WP_002230464.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_002230464.1;transl_table=11 NC_010634.1 RefSeq gene 476364 476942 . + . ID=gene445;Name=YPTS_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02235;old_locus_tag=YPTS_0429 NC_010634.1 Protein Homology CDS 476364 476942 . + 0 ID=cds421;Parent=gene445;Dbxref=Genbank:WP_002209126.1;Name=WP_002209126.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_002209126.1;transl_table=11 NC_010634.1 RefSeq gene 477197 477490 . + . ID=gene446;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=YPTS_RS02240;old_locus_tag=YPTS_0430 NC_010634.1 Protein Homology CDS 477197 477490 . + 0 ID=cds422;Parent=gene446;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NC_010634.1 RefSeq gene 477537 479183 . + . ID=gene447;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=YPTS_RS02245;old_locus_tag=YPTS_0431 NC_010634.1 Protein Homology CDS 477537 479183 . + 0 ID=cds423;Parent=gene447;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11 NC_010634.1 RefSeq gene 479807 480205 . + . ID=gene448;Name=YPTS_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02250;old_locus_tag=YPTS_0432 NC_010634.1 Protein Homology CDS 479807 480205 . + 0 ID=cds424;Parent=gene448;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11 NC_010634.1 RefSeq gene 480490 481518 . - . ID=gene449;Name=YPTS_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02255;old_locus_tag=YPTS_0433 NC_010634.1 Protein Homology CDS 480490 481518 . - 0 ID=cds425;Parent=gene449;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NC_010634.1 RefSeq gene 481554 482120 . + . ID=gene450;Name=YPTS_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02260;old_locus_tag=YPTS_0434 NC_010634.1 Protein Homology CDS 481554 482120 . + 0 ID=cds426;Parent=gene450;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NC_010634.1 RefSeq gene 482367 482681 . + . ID=gene451;Name=YPTS_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02265 NC_010634.1 Protein Homology CDS 482367 482681 . + 0 ID=cds427;Parent=gene451;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11 NC_010634.1 RefSeq gene 482846 483202 . - . ID=gene452;Name=YPTS_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02270;old_locus_tag=YPTS_0436 NC_010634.1 Protein Homology CDS 482846 483202 . - 0 ID=cds428;Parent=gene452;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11 NC_010634.1 RefSeq gene 483219 483611 . - . ID=gene453;Name=YPTS_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02275;old_locus_tag=YPTS_0437 NC_010634.1 Protein Homology CDS 483219 483611 . - 0 ID=cds429;Parent=gene453;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11 NC_010634.1 RefSeq gene 483628 484362 . - . ID=gene454;Name=YPTS_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02280;old_locus_tag=YPTS_0438 NC_010634.1 Protein Homology CDS 483628 484362 . - 0 ID=cds430;Parent=gene454;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NC_010634.1 RefSeq gene 484355 486178 . - . ID=gene455;Name=YPTS_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02285;old_locus_tag=YPTS_0439 NC_010634.1 Protein Homology CDS 484355 486178 . - 0 ID=cds431;Parent=gene455;Dbxref=Genbank:WP_002209137.1;Name=WP_002209137.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11 NC_010634.1 RefSeq gene 486285 486476 . + . ID=gene456;Name=YPTS_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02290 NC_010634.1 Protein Homology CDS 486285 486476 . + 0 ID=cds432;Parent=gene456;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11 NC_010634.1 RefSeq gene 486636 487613 . + . ID=gene457;Name=YPTS_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02295;old_locus_tag=YPTS_0440 NC_010634.1 Protein Homology CDS 486636 487613 . + 0 ID=cds433;Parent=gene457;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NC_010634.1 RefSeq repeat_region 487635 487739 . + . ID=id46;gbkey=repeat_region NC_010634.1 RefSeq gene 487858 491199 . - . ID=gene458;Name=YPTS_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02300;old_locus_tag=YPTS_0441 NC_010634.1 Protein Homology CDS 487858 491199 . - 0 ID=cds434;Parent=gene458;Dbxref=Genbank:WP_012413446.1;Name=WP_012413446.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_012413446.1;transl_table=11 NC_010634.1 RefSeq gene 491241 492122 . - . ID=gene459;Name=YPTS_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02305;old_locus_tag=YPTS_0442 NC_010634.1 Protein Homology CDS 491241 492122 . - 0 ID=cds435;Parent=gene459;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11 NC_010634.1 RefSeq gene 492447 493499 . - . ID=gene460;Name=YPTS_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02310;old_locus_tag=YPTS_0443 NC_010634.1 Protein Homology CDS 492447 493499 . - 0 ID=cds436;Parent=gene460;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NC_010634.1 RefSeq gene 493506 493700 . - . ID=gene461;Name=YPTS_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02315 NC_010634.1 Protein Homology CDS 493506 493700 . - 0 ID=cds437;Parent=gene461;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11 NC_010634.1 RefSeq gene 493699 494244 . + . ID=gene462;Name=YPTS_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02320;old_locus_tag=YPTS_0444 NC_010634.1 Protein Homology CDS 493699 494244 . + 0 ID=cds438;Parent=gene462;Dbxref=Genbank:WP_011191612.1;Name=WP_011191612.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_011191612.1;transl_table=11 NC_010634.1 RefSeq repeat_region 494256 494599 . + . ID=id47;gbkey=repeat_region NC_010634.1 RefSeq gene 494803 494878 . + . ID=gene463;Name=YPTS_RS02330;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS02330;old_locus_tag=YPTS_R0015 NC_010634.1 tRNAscan-SE tRNA 494803 494878 . + . ID=rna24;Parent=gene463;anticodon=(pos:494836..494838);gbkey=tRNA;product=tRNA-Gly NC_010634.1 tRNAscan-SE exon 494803 494878 . + . ID=id48;Parent=rna24;anticodon=(pos:494836..494838);gbkey=tRNA;product=tRNA-Gly NC_010634.1 RefSeq gene 494970 495045 . + . ID=gene464;Name=YPTS_RS02335;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS02335;old_locus_tag=YPTS_R0016 NC_010634.1 tRNAscan-SE tRNA 494970 495045 . + . ID=rna25;Parent=gene464;anticodon=(pos:495003..495005);gbkey=tRNA;product=tRNA-Gly NC_010634.1 tRNAscan-SE exon 494970 495045 . + . ID=id49;Parent=rna25;anticodon=(pos:495003..495005);gbkey=tRNA;product=tRNA-Gly NC_010634.1 RefSeq gene 495113 495188 . + . ID=gene465;Name=YPTS_RS02340;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS02340;old_locus_tag=YPTS_R0017 NC_010634.1 tRNAscan-SE tRNA 495113 495188 . + . ID=rna26;Parent=gene465;anticodon=(pos:495146..495148);gbkey=tRNA;product=tRNA-Gly NC_010634.1 tRNAscan-SE exon 495113 495188 . + . ID=id50;Parent=rna26;anticodon=(pos:495146..495148);gbkey=tRNA;product=tRNA-Gly NC_010634.1 RefSeq gene 495500 496735 . - . ID=gene466;Name=YPTS_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02345;old_locus_tag=YPTS_0447 NC_010634.1 Protein Homology CDS 495500 496735 . - 0 ID=cds439;Parent=gene466;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11 NC_010634.1 RefSeq gene 496734 498248 . + . ID=gene467;Name=YPTS_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02350;old_locus_tag=YPTS_0448 NC_010634.1 Protein Homology CDS 496734 498248 . + 0 ID=cds440;Parent=gene467;Dbxref=Genbank:WP_002209145.1;Name=WP_002209145.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002209145.1;transl_table=11 NC_010634.1 RefSeq gene 498259 498729 . + . ID=gene468;Name=YPTS_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02355;old_locus_tag=YPTS_0449 NC_010634.1 Protein Homology CDS 498259 498729 . + 0 ID=cds441;Parent=gene468;Dbxref=Genbank:WP_011191614.1;Name=WP_011191614.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_011191614.1;transl_table=11 NC_010634.1 RefSeq gene 498737 500650 . + . ID=gene469;Name=YPTS_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02360;old_locus_tag=YPTS_0450 NC_010634.1 Protein Homology CDS 498737 500650 . + 0 ID=cds442;Parent=gene469;Dbxref=Genbank:WP_012413447.1;Name=WP_012413447.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_012413447.1;transl_table=11 NC_010634.1 RefSeq gene 500666 502573 . + . ID=gene470;Name=YPTS_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02365;old_locus_tag=YPTS_0451 NC_010634.1 Protein Homology CDS 500666 502573 . + 0 ID=cds443;Parent=gene470;Dbxref=Genbank:WP_002209148.1;Name=WP_002209148.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_002209148.1;transl_table=11 NC_010634.1 RefSeq gene 502566 503507 . + . ID=gene471;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YPTS_RS02370;old_locus_tag=YPTS_0452 NC_010634.1 Protein Homology CDS 502566 503507 . + 0 ID=cds444;Parent=gene471;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11 NC_010634.1 RefSeq gene 503624 503929 . + . ID=gene472;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YPTS_RS02375;old_locus_tag=YPTS_0453 NC_010634.1 Protein Homology CDS 503624 503929 . + 0 ID=cds445;Parent=gene472;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NC_010634.1 RefSeq gene 504028 505314 . + . ID=gene473;Name=YPTS_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02380;old_locus_tag=YPTS_0455 NC_010634.1 Protein Homology CDS 504028 505314 . + 0 ID=cds446;Parent=gene473;Dbxref=Genbank:WP_002209152.1;Name=WP_002209152.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_002209152.1;transl_table=11 NC_010634.1 RefSeq gene 505555 506817 . + . ID=gene474;Name=YPTS_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02385;old_locus_tag=YPTS_0456 NC_010634.1 Protein Homology CDS 505555 506817 . + 0 ID=cds447;Parent=gene474;Dbxref=Genbank:WP_011191616.1;Name=WP_011191616.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_011191616.1;transl_table=11 NC_010634.1 RefSeq gene 506821 507825 . + . ID=gene475;Name=YPTS_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02390;old_locus_tag=YPTS_0457 NC_010634.1 Protein Homology CDS 506821 507825 . + 0 ID=cds448;Parent=gene475;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11 NC_010634.1 RefSeq gene 507997 508197 . + . ID=gene476;Name=YPTS_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02395;old_locus_tag=YPTS_0458 NC_010634.1 Protein Homology CDS 507997 508197 . + 0 ID=cds449;Parent=gene476;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11 NC_010634.1 RefSeq gene 508297 509595 . + . ID=gene477;Name=YPTS_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02400;old_locus_tag=YPTS_0459 NC_010634.1 Protein Homology CDS 508297 509595 . + 0 ID=cds450;Parent=gene477;Dbxref=Genbank:WP_002209157.1;Name=WP_002209157.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_002209157.1;transl_table=11 NC_010634.1 RefSeq gene 509984 510409 . + . ID=gene478;Name=YPTS_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02405;old_locus_tag=YPTS_0460 NC_010634.1 Protein Homology CDS 509984 510409 . + 0 ID=cds451;Parent=gene478;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11 NC_010634.1 RefSeq gene 510650 513184 . + . ID=gene479;Name=YPTS_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02410;old_locus_tag=YPTS_0461 NC_010634.1 Protein Homology CDS 510650 513184 . + 0 ID=cds452;Parent=gene479;Dbxref=Genbank:WP_012413448.1;Name=WP_012413448.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_012413448.1;transl_table=11 NC_010634.1 RefSeq gene 513303 514043 . + . ID=gene480;Name=YPTS_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02415;old_locus_tag=YPTS_0462 NC_010634.1 Protein Homology CDS 513303 514043 . + 0 ID=cds453;Parent=gene480;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NC_010634.1 RefSeq repeat_region 514119 514290 . + . ID=id51;gbkey=repeat_region NC_010634.1 RefSeq gene 514463 516094 . + . ID=gene481;Name=YPTS_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02420;old_locus_tag=YPTS_0464 NC_010634.1 Protein Homology CDS 514463 516094 . + 0 ID=cds454;Parent=gene481;Dbxref=Genbank:WP_032466990.1;Name=WP_032466990.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl-CoA dehydrogenase;protein_id=WP_032466990.1;transl_table=11 NC_010634.1 RefSeq gene 516242 516553 . - . ID=gene482;Name=YPTS_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02425;old_locus_tag=YPTS_0465 NC_010634.1 Protein Homology CDS 516242 516553 . - 0 ID=cds455;Parent=gene482;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11 NC_010634.1 RefSeq gene 516744 517493 . + . ID=gene483;Name=YPTS_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02430;old_locus_tag=YPTS_0466 NC_010634.1 Protein Homology CDS 516744 517493 . + 0 ID=cds456;Parent=gene483;Dbxref=Genbank:WP_011191618.1;Name=WP_011191618.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_011191618.1;transl_table=11 NC_010634.1 RefSeq gene 517568 517846 . + . ID=gene484;Name=YPTS_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02435;old_locus_tag=YPTS_0467 NC_010634.1 Protein Homology CDS 517568 517846 . + 0 ID=cds457;Parent=gene484;Dbxref=Genbank:WP_011191619.1;Name=WP_011191619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191619.1;transl_table=11 NC_010634.1 RefSeq gene 517860 518252 . + . ID=gene485;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YPTS_RS02440;old_locus_tag=YPTS_0468 NC_010634.1 Protein Homology CDS 517860 518252 . + 0 ID=cds458;Parent=gene485;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NC_010634.1 RefSeq gene 518261 518578 . + . ID=gene486;Name=YPTS_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02445 NC_010634.1 Protein Homology CDS 518261 518578 . + 0 ID=cds459;Parent=gene486;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11 NC_010634.1 RefSeq gene 518583 518810 . + . ID=gene487;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YPTS_RS02450;old_locus_tag=YPTS_0470 NC_010634.1 Protein Homology CDS 518583 518810 . + 0 ID=cds460;Parent=gene487;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NC_010634.1 RefSeq gene 518850 519302 . + . ID=gene488;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YPTS_RS02455;old_locus_tag=YPTS_0471 NC_010634.1 Protein Homology CDS 518850 519302 . + 0 ID=cds461;Parent=gene488;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NC_010634.1 RefSeq gene 519368 519823 . - . ID=gene489;Name=YPTS_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02460;old_locus_tag=YPTS_0472 NC_010634.1 Protein Homology CDS 519368 519823 . - 0 ID=cds462;Parent=gene489;Dbxref=Genbank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210157.1;transl_table=11 NC_010634.1 RefSeq gene 519963 520703 . - . ID=gene490;Name=YPTS_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02465;old_locus_tag=YPTS_0473 NC_010634.1 Protein Homology CDS 519963 520703 . - 0 ID=cds463;Parent=gene490;Dbxref=Genbank:WP_002210158.1;Name=WP_002210158.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_002210158.1;transl_table=11 NC_010634.1 RefSeq gene 521052 521672 . + . ID=gene491;Name=YPTS_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02470;old_locus_tag=YPTS_0474 NC_010634.1 Protein Homology CDS 521052 521672 . + 0 ID=cds464;Parent=gene491;Dbxref=Genbank:WP_011191620.1;Name=WP_011191620.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_011191620.1;transl_table=11 NC_010634.1 RefSeq gene 521770 522435 . - . ID=gene492;Name=YPTS_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02475;old_locus_tag=YPTS_0475 NC_010634.1 Protein Homology CDS 521770 522435 . - 0 ID=cds465;Parent=gene492;Dbxref=Genbank:WP_012413449.1;Name=WP_012413449.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_012413449.1;transl_table=11 NC_010634.1 RefSeq gene 522564 524534 . - . ID=gene493;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=YPTS_RS02480;old_locus_tag=YPTS_0476 NC_010634.1 Protein Homology CDS 522564 524534 . - 0 ID=cds466;Parent=gene493;Dbxref=Genbank:WP_032466988.1;Name=WP_032466988.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=WP_032466988.1;transl_table=11 NC_010634.1 RefSeq gene 524986 525726 . + . ID=gene494;Name=YPTS_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02485;old_locus_tag=YPTS_0477 NC_010634.1 Protein Homology CDS 524986 525726 . + 0 ID=cds467;Parent=gene494;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11 NC_010634.1 RefSeq gene 525729 526292 . - . ID=gene495;Name=YPTS_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02490;old_locus_tag=YPTS_0478 NC_010634.1 Protein Homology CDS 525729 526292 . - 0 ID=cds468;Parent=gene495;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11 NC_010634.1 RefSeq gene 526628 526840 . + . ID=gene496;Name=YPTS_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02495;old_locus_tag=YPTS_0479 NC_010634.1 Protein Homology CDS 526628 526840 . + 0 ID=cds469;Parent=gene496;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11 NC_010634.1 RefSeq gene 526948 528279 . - . ID=gene497;Name=YPTS_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02500;old_locus_tag=YPTS_0480 NC_010634.1 Protein Homology CDS 526948 528279 . - 0 ID=cds470;Parent=gene497;Dbxref=Genbank:WP_002210164.1;Name=WP_002210164.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210164.1;transl_table=11 NC_010634.1 RefSeq gene 528557 529195 . - . ID=gene498;Name=YPTS_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02505;old_locus_tag=YPTS_0481 NC_010634.1 Protein Homology CDS 528557 529195 . - 0 ID=cds471;Parent=gene498;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NC_010634.1 RefSeq gene 529470 531206 . + . ID=gene499;Name=YPTS_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02510;old_locus_tag=YPTS_0482 NC_010634.1 Protein Homology CDS 529470 531206 . + 0 ID=cds472;Parent=gene499;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11 NC_010634.1 RefSeq gene 531203 535141 . + . ID=gene500;Name=YPTS_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02515;old_locus_tag=YPTS_0483 NC_010634.1 Protein Homology CDS 531203 535141 . + 0 ID=cds473;Parent=gene500;Dbxref=Genbank:WP_012413451.1;Name=WP_012413451.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413451.1;transl_table=11 NC_010634.1 RefSeq gene 535144 535500 . + . ID=gene501;Name=YPTS_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02520;old_locus_tag=YPTS_0484 NC_010634.1 Protein Homology CDS 535144 535500 . + 0 ID=cds474;Parent=gene501;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11 NC_010634.1 RefSeq gene 535618 536145 . - . ID=gene502;Name=YPTS_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02525;old_locus_tag=YPTS_0485 NC_010634.1 Protein Homology CDS 535618 536145 . - 0 ID=cds475;Parent=gene502;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11 NC_010634.1 RefSeq gene 536345 537358 . - . ID=gene503;Name=YPTS_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02530;old_locus_tag=YPTS_0486 NC_010634.1 Protein Homology CDS 536345 537358 . - 0 ID=cds476;Parent=gene503;Dbxref=Genbank:WP_011191626.1;Name=WP_011191626.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_011191626.1;transl_table=11 NC_010634.1 RefSeq gene 537529 538914 . + . ID=gene504;Name=YPTS_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02535;old_locus_tag=YPTS_0487 NC_010634.1 Protein Homology CDS 537529 538914 . + 0 ID=cds477;Parent=gene504;Dbxref=Genbank:WP_011191627.1;Name=WP_011191627.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_011191627.1;transl_table=11 NC_010634.1 RefSeq gene 539001 539207 . + . ID=gene505;Name=YPTS_RS02540;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS02540 NC_010634.1 RefSeq repeat_region 539016 539185 . + . ID=id52;gbkey=repeat_region NC_010634.1 RefSeq gene 539210 539473 . - . ID=gene506;Name=YPTS_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02545;old_locus_tag=YPTS_0488 NC_010634.1 Protein Homology CDS 539210 539473 . - 0 ID=cds478;Parent=gene506;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11 NC_010634.1 RefSeq gene 539862 540332 . - . ID=gene507;Name=YPTS_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02550;old_locus_tag=YPTS_0489 NC_010634.1 Protein Homology CDS 539862 540332 . - 0 ID=cds479;Parent=gene507;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11 NC_010634.1 RefSeq gene 540796 541734 . + . ID=gene508;Name=YPTS_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02555;old_locus_tag=YPTS_0490 NC_010634.1 Protein Homology CDS 540796 541734 . + 0 ID=cds480;Parent=gene508;Dbxref=Genbank:WP_002210174.1;Name=WP_002210174.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NC_010634.1 RefSeq gene 542168 542443 . - . ID=gene509;Name=YPTS_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02560;old_locus_tag=YPTS_0491 NC_010634.1 Protein Homology CDS 542168 542443 . - 0 ID=cds481;Parent=gene509;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11 NC_010634.1 RefSeq gene 542627 542974 . + . ID=gene510;Name=YPTS_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02565;old_locus_tag=YPTS_0492 NC_010634.1 Protein Homology CDS 542627 542974 . + 0 ID=cds482;Parent=gene510;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NC_010634.1 RefSeq gene 543071 544042 . - . ID=gene511;Name=YPTS_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02570;old_locus_tag=YPTS_0493 NC_010634.1 Protein Homology CDS 543071 544042 . - 0 ID=cds483;Parent=gene511;Dbxref=Genbank:WP_011191628.1;Name=WP_011191628.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_011191628.1;transl_table=11 NC_010634.1 RefSeq gene 544302 544613 . + . ID=gene512;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YPTS_RS02575;old_locus_tag=YPTS_0494 NC_010634.1 Protein Homology CDS 544302 544613 . + 0 ID=cds484;Parent=gene512;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NC_010634.1 RefSeq gene 544633 544890 . + . ID=gene513;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YPTS_RS02580;old_locus_tag=YPTS_0495 NC_010634.1 Protein Homology CDS 544633 544890 . + 0 ID=cds485;Parent=gene513;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NC_010634.1 RefSeq gene 544978 545964 . + . ID=gene514;Name=YPTS_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02585;old_locus_tag=YPTS_0496 NC_010634.1 Protein Homology CDS 544978 545964 . + 0 ID=cds486;Parent=gene514;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11 NC_010634.1 RefSeq gene 545965 547137 . + . ID=gene515;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=YPTS_RS02590;old_locus_tag=YPTS_0497 NC_010634.1 Protein Homology CDS 545965 547137 . + 0 ID=cds487;Parent=gene515;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11 NC_010634.1 RefSeq gene 547232 548299 . - . ID=gene516;Name=YPTS_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02595;old_locus_tag=YPTS_0498 NC_010634.1 Protein Homology CDS 547232 548299 . - 0 ID=cds488;Parent=gene516;Dbxref=Genbank:WP_011191629.1;Name=WP_011191629.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_011191629.1;transl_table=11 NC_010634.1 RefSeq gene 548296 548958 . - . ID=gene517;Name=YPTS_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02600;old_locus_tag=YPTS_0499 NC_010634.1 Protein Homology CDS 548296 548958 . - 0 ID=cds489;Parent=gene517;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11 NC_010634.1 RefSeq gene 548964 550412 . - . ID=gene518;Name=YPTS_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02605;old_locus_tag=YPTS_0500 NC_010634.1 Protein Homology CDS 548964 550412 . - 0 ID=cds490;Parent=gene518;Dbxref=Genbank:WP_002217314.1;Name=WP_002217314.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002217314.1;transl_table=11 NC_010634.1 RefSeq gene 550670 551146 . + . ID=gene519;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YPTS_RS02610;old_locus_tag=YPTS_0501 NC_010634.1 Protein Homology CDS 550670 551146 . + 0 ID=cds491;Parent=gene519;Dbxref=Genbank:WP_002210184.1;Name=WP_002210184.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NC_010634.1 RefSeq gene 551274 551567 . - . ID=gene520;Name=YPTS_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02615;old_locus_tag=YPTS_0502 NC_010634.1 Protein Homology CDS 551274 551567 . - 0 ID=cds492;Parent=gene520;Dbxref=Genbank:WP_002210185.1;Name=WP_002210185.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002210185.1;transl_table=11 NC_010634.1 RefSeq gene 551714 552343 . + . ID=gene521;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=YPTS_RS02620;old_locus_tag=YPTS_0503 NC_010634.1 Protein Homology CDS 551714 552343 . + 0 ID=cds493;Parent=gene521;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11 NC_010634.1 RefSeq gene 552400 554334 . + . ID=gene522;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=YPTS_RS02625;old_locus_tag=YPTS_0504 NC_010634.1 Protein Homology CDS 552400 554334 . + 0 ID=cds494;Parent=gene522;Dbxref=Genbank:WP_002228195.1;Name=WP_002228195.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_002228195.1;transl_table=11 NC_010634.1 RefSeq gene 554454 555287 . + . ID=gene523;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YPTS_RS02630;old_locus_tag=YPTS_0505 NC_010634.1 Protein Homology CDS 554454 555287 . + 0 ID=cds495;Parent=gene523;Dbxref=Genbank:WP_011191630.1;Name=WP_011191630.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_011191630.1;transl_table=11 NC_010634.1 RefSeq gene 555297 556637 . + . ID=gene524;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YPTS_RS02635;old_locus_tag=YPTS_0506 NC_010634.1 Protein Homology CDS 555297 556637 . + 0 ID=cds496;Parent=gene524;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NC_010634.1 RefSeq gene 556860 557195 . + . ID=gene525;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YPTS_RS02640;old_locus_tag=YPTS_0507 NC_010634.1 Protein Homology CDS 556860 557195 . + 0 ID=cds497;Parent=gene525;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NC_010634.1 RefSeq gene 557288 557374 . + . ID=gene526;Name=YPTS_RS02645;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS02645;old_locus_tag=YPTS_R0018 NC_010634.1 tRNAscan-SE tRNA 557288 557374 . + . ID=rna27;Parent=gene526;anticodon=(pos:557322..557324);gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 557288 557374 . + . ID=id53;Parent=rna27;anticodon=(pos:557322..557324);gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq gene 557435 557511 . + . ID=gene527;Name=YPTS_RS02650;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS02650;old_locus_tag=YPTS_R0019 NC_010634.1 tRNAscan-SE tRNA 557435 557511 . + . ID=rna28;Parent=gene527;anticodon=(pos:557469..557471);gbkey=tRNA;product=tRNA-Met NC_010634.1 tRNAscan-SE exon 557435 557511 . + . ID=id54;Parent=rna28;anticodon=(pos:557469..557471);gbkey=tRNA;product=tRNA-Met NC_010634.1 RefSeq gene 557727 558179 . + . ID=gene528;Name=YPTS_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02655;old_locus_tag=YPTS_0508 NC_010634.1 Protein Homology CDS 557727 558179 . + 0 ID=cds498;Parent=gene528;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11 NC_010634.1 RefSeq gene 558201 559688 . + . ID=gene529;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YPTS_RS02660;old_locus_tag=YPTS_0509 NC_010634.1 Protein Homology CDS 558201 559688 . + 0 ID=cds499;Parent=gene529;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NC_010634.1 RefSeq gene 559713 562391 . + . ID=gene530;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YPTS_RS02665;old_locus_tag=YPTS_0510 NC_010634.1 Protein Homology CDS 559713 562391 . + 0 ID=cds500;Parent=gene530;Dbxref=Genbank:WP_002223151.1;Name=WP_002223151.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_002223151.1;transl_table=11 NC_010634.1 RefSeq gene 562457 562867 . + . ID=gene531;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YPTS_RS02670;old_locus_tag=YPTS_0511 NC_010634.1 Protein Homology CDS 562457 562867 . + 0 ID=cds501;Parent=gene531;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11 NC_010634.1 RefSeq gene 562867 563841 . + . ID=gene532;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YPTS_RS02675;old_locus_tag=YPTS_0512 NC_010634.1 Protein Homology CDS 562867 563841 . + 0 ID=cds502;Parent=gene532;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11 NC_010634.1 RefSeq gene 563963 564232 . + . ID=gene533;Name=YPTS_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02680;old_locus_tag=YPTS_0513 NC_010634.1 Protein Homology CDS 563963 564232 . + 0 ID=cds503;Parent=gene533;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NC_010634.1 RefSeq gene 564496 566610 . + . ID=gene534;Name=YPTS_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02685;old_locus_tag=YPTS_0514 NC_010634.1 Protein Homology CDS 564496 566610 . + 0 ID=cds504;Parent=gene534;Dbxref=Genbank:WP_011191631.1;Name=WP_011191631.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_011191631.1;transl_table=11 NC_010634.1 RefSeq gene 566735 567619 . + . ID=gene535;Name=YPTS_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02690;old_locus_tag=YPTS_0515 NC_010634.1 Protein Homology CDS 566735 567619 . + 0 ID=cds505;Parent=gene535;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NC_010634.1 RefSeq gene 567806 569800 . + . ID=gene536;Name=YPTS_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02695;old_locus_tag=YPTS_0516 NC_010634.1 Protein Homology CDS 567806 569800 . + 0 ID=cds506;Parent=gene536;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NC_010634.1 RefSeq gene 569820 569993 . + . ID=gene537;Name=YPTS_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02700 NC_010634.1 Protein Homology CDS 569820 569993 . + 0 ID=cds507;Parent=gene537;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11 NC_010634.1 RefSeq gene 570036 570404 . + . ID=gene538;Name=YPTS_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02705;old_locus_tag=YPTS_0517 NC_010634.1 Protein Homology CDS 570036 570404 . + 0 ID=cds508;Parent=gene538;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11 NC_010634.1 RefSeq gene 570428 570739 . + . ID=gene539;Name=YPTS_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02710;old_locus_tag=YPTS_0518 NC_010634.1 Protein Homology CDS 570428 570739 . + 0 ID=cds509;Parent=gene539;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11 NC_010634.1 RefSeq repeat_region 570770 570914 . + . ID=id55;gbkey=repeat_region NC_010634.1 RefSeq gene 570994 572049 . - . ID=gene540;Name=YPTS_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02715;old_locus_tag=YPTS_0520 NC_010634.1 Protein Homology CDS 570994 572049 . - 0 ID=cds510;Parent=gene540;Dbxref=Genbank:WP_012413453.1;Name=WP_012413453.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413453.1;transl_table=11 NC_010634.1 RefSeq gene 572557 573717 . + . ID=gene541;Name=YPTS_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02720;old_locus_tag=YPTS_0521 NC_010634.1 Protein Homology CDS 572557 573717 . + 0 ID=cds511;Parent=gene541;Dbxref=Genbank:WP_002209266.1;Name=WP_002209266.1;gbkey=CDS;product=acriflavine resistance protein E;protein_id=WP_002209266.1;transl_table=11 NC_010634.1 RefSeq gene 573721 576846 . + . ID=gene542;Name=YPTS_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02725;old_locus_tag=YPTS_0522 NC_010634.1 Protein Homology CDS 573721 576846 . + 0 ID=cds512;Parent=gene542;Dbxref=Genbank:WP_012413454.1;Name=WP_012413454.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_012413454.1;transl_table=11 NC_010634.1 RefSeq gene 576848 578254 . + . ID=gene543;Name=YPTS_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02730;old_locus_tag=YPTS_0523 NC_010634.1 Protein Homology CDS 576848 578254 . + 0 ID=cds513;Parent=gene543;Dbxref=Genbank:WP_011191634.1;Name=WP_011191634.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_011191634.1;transl_table=11 NC_010634.1 RefSeq gene 578395 579273 . - . ID=gene544;Name=YPTS_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02735;old_locus_tag=YPTS_0524 NC_010634.1 Protein Homology CDS 578395 579273 . - 0 ID=cds514;Parent=gene544;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11 NC_010634.1 RefSeq gene 579285 580280 . - . ID=gene545;Name=YPTS_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02740;old_locus_tag=YPTS_0525 NC_010634.1 Protein Homology CDS 579285 580280 . - 0 ID=cds515;Parent=gene545;Dbxref=Genbank:WP_011191635.1;Name=WP_011191635.1;gbkey=CDS;product=protease;protein_id=WP_011191635.1;transl_table=11 NC_010634.1 RefSeq gene 580390 580515 . - . ID=gene546;Name=YPTS_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02745 NC_010634.1 Protein Homology CDS 580390 580515 . - 0 ID=cds516;Parent=gene546;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11 NC_010634.1 RefSeq gene 580596 581117 . + . ID=gene547;Name=YPTS_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02750;old_locus_tag=YPTS_0526 NC_010634.1 Protein Homology CDS 580596 581117 . + 0 ID=cds517;Parent=gene547;Dbxref=Genbank:WP_002209272.1;Name=WP_002209272.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_002209272.1;transl_table=11 NC_010634.1 RefSeq gene 581111 581614 . + . ID=gene548;Name=YPTS_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02755;old_locus_tag=YPTS_0527 NC_010634.1 Protein Homology CDS 581111 581614 . + 0 ID=cds518;Parent=gene548;Dbxref=Genbank:WP_011191636.1;Name=WP_011191636.1;gbkey=CDS;product=N-acetyltransferase;protein_id=WP_011191636.1;transl_table=11 NC_010634.1 RefSeq repeat_region 581692 581822 . + . ID=id56;gbkey=repeat_region NC_010634.1 RefSeq gene 581709 581816 . - . ID=gene549;Name=YPTS_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02760 NC_010634.1 Protein Homology CDS 581709 581816 . - 0 ID=cds519;Parent=gene549;Dbxref=Genbank:WP_038400500.1;Name=WP_038400500.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400500.1;transl_table=11 NC_010634.1 RefSeq gene 581789 582076 . - . ID=gene550;Name=YPTS_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02765;old_locus_tag=YPTS_0528 NC_010634.1 Protein Homology CDS 581789 582076 . - 0 ID=cds520;Parent=gene550;Dbxref=Genbank:WP_011191637.1;Name=WP_011191637.1;gbkey=CDS;product=nuclease;protein_id=WP_011191637.1;transl_table=11 NC_010634.1 RefSeq gene 582304 584322 . - . ID=gene551;Name=YPTS_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02770;old_locus_tag=YPTS_0529 NC_010634.1 Protein Homology CDS 582304 584322 . - 0 ID=cds521;Parent=gene551;Dbxref=Genbank:WP_011191638.1;Name=WP_011191638.1;gbkey=CDS;product=alginate lyase;protein_id=WP_011191638.1;transl_table=11 NC_010634.1 RefSeq gene 584346 585569 . - . ID=gene552;Name=YPTS_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02775;old_locus_tag=YPTS_0530 NC_010634.1 Protein Homology CDS 584346 585569 . - 0 ID=cds522;Parent=gene552;Dbxref=Genbank:WP_012304649.1;Name=WP_012304649.1;gbkey=CDS;product=alginate lyase;protein_id=WP_012304649.1;transl_table=11 NC_010634.1 RefSeq gene 586130 587443 . + . ID=gene553;Name=YPTS_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02780;old_locus_tag=YPTS_0531 NC_010634.1 Protein Homology CDS 586130 587443 . + 0 ID=cds523;Parent=gene553;Dbxref=Genbank:WP_011191640.1;Name=WP_011191640.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011191640.1;transl_table=11 NC_010634.1 RefSeq gene 587451 588335 . + . ID=gene554;Name=YPTS_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02785;old_locus_tag=YPTS_0532 NC_010634.1 Protein Homology CDS 587451 588335 . + 0 ID=cds524;Parent=gene554;Dbxref=Genbank:WP_011191641.1;Name=WP_011191641.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011191641.1;transl_table=11 NC_010634.1 RefSeq gene 588354 589193 . + . ID=gene555;Name=YPTS_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02790;old_locus_tag=YPTS_0533 NC_010634.1 Protein Homology CDS 588354 589193 . + 0 ID=cds525;Parent=gene555;Dbxref=Genbank:WP_002209279.1;Name=WP_002209279.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NC_010634.1 RefSeq gene 589205 590299 . + . ID=gene556;Name=YPTS_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02795;old_locus_tag=YPTS_0534 NC_010634.1 Protein Homology CDS 589205 590299 . + 0 ID=cds526;Parent=gene556;Dbxref=Genbank:WP_002209280.1;Name=WP_002209280.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209280.1;transl_table=11 NC_010634.1 RefSeq gene 590314 591480 . + . ID=gene557;Name=YPTS_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02800;old_locus_tag=YPTS_0535 NC_010634.1 Protein Homology CDS 590314 591480 . + 0 ID=cds527;Parent=gene557;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11 NC_010634.1 RefSeq gene 591609 592052 . + . ID=gene558;Name=YPTS_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02805;old_locus_tag=YPTS_0536 NC_010634.1 Protein Homology CDS 591609 592052 . + 0 ID=cds528;Parent=gene558;Dbxref=Genbank:WP_011191642.1;Name=WP_011191642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191642.1;transl_table=11 NC_010634.1 RefSeq gene 592204 592842 . + . ID=gene559;Name=YPTS_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02810;old_locus_tag=YPTS_0537 NC_010634.1 Protein Homology CDS 592204 592842 . + 0 ID=cds529;Parent=gene559;Dbxref=Genbank:WP_002209283.1;Name=WP_002209283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209283.1;transl_table=11 NC_010634.1 RefSeq gene 592888 593640 . - . ID=gene560;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YPTS_RS02815;old_locus_tag=YPTS_0538 NC_010634.1 Protein Homology CDS 592888 593640 . - 0 ID=cds530;Parent=gene560;Dbxref=Genbank:WP_002209284.1;Name=WP_002209284.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_002209284.1;transl_table=11 NC_010634.1 RefSeq gene 593631 594212 . - . ID=gene561;Name=YPTS_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02820;old_locus_tag=YPTS_0539 NC_010634.1 Protein Homology CDS 593631 594212 . - 0 ID=cds531;Parent=gene561;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11 NC_010634.1 RefSeq gene 594212 595348 . - . ID=gene562;Name=YPTS_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02825;old_locus_tag=YPTS_0540 NC_010634.1 Protein Homology CDS 594212 595348 . - 0 ID=cds532;Parent=gene562;Dbxref=Genbank:WP_011191643.1;Name=WP_011191643.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_011191643.1;transl_table=11 NC_010634.1 RefSeq gene 595345 596064 . - . ID=gene563;Name=YPTS_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02830;old_locus_tag=YPTS_0541 NC_010634.1 Protein Homology CDS 595345 596064 . - 0 ID=cds533;Parent=gene563;Dbxref=Genbank:WP_011191644.1;Name=WP_011191644.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_011191644.1;transl_table=11 NC_010634.1 RefSeq gene 596453 597244 . - . ID=gene564;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YPTS_RS02835;old_locus_tag=YPTS_0542 NC_010634.1 Protein Homology CDS 596453 597244 . - 0 ID=cds534;Parent=gene564;Dbxref=Genbank:WP_011191645.1;Name=WP_011191645.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_011191645.1;transl_table=11 NC_010634.1 RefSeq gene 597244 598125 . - . ID=gene565;Name=YPTS_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02840;old_locus_tag=YPTS_0543 NC_010634.1 Protein Homology CDS 597244 598125 . - 0 ID=cds535;Parent=gene565;Dbxref=Genbank:WP_011191646.1;Name=WP_011191646.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_011191646.1;transl_table=11 NC_010634.1 RefSeq gene 598118 599296 . - . ID=gene566;Name=YPTS_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02845;old_locus_tag=YPTS_0544 NC_010634.1 Protein Homology CDS 598118 599296 . - 0 ID=cds536;Parent=gene566;Dbxref=Genbank:WP_011191647.1;Name=WP_011191647.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_011191647.1;transl_table=11 NC_010634.1 RefSeq gene 599296 599922 . - . ID=gene567;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=YPTS_RS02850;old_locus_tag=YPTS_0545 NC_010634.1 Protein Homology CDS 599296 599922 . - 0 ID=cds537;Parent=gene567;Dbxref=Genbank:WP_011191648.1;Name=WP_011191648.1;gbkey=CDS;gene=phnH;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_011191648.1;transl_table=11 NC_010634.1 RefSeq gene 599922 600398 . - . ID=gene568;Name=YPTS_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02855;old_locus_tag=YPTS_0546 NC_010634.1 Protein Homology CDS 599922 600398 . - 0 ID=cds538;Parent=gene568;Dbxref=Genbank:WP_002209292.1;Name=WP_002209292.1;gbkey=CDS;product=phosphonate metabolism protein PhnG;protein_id=WP_002209292.1;transl_table=11 NC_010634.1 RefSeq gene 600399 601124 . - . ID=gene569;Name=YPTS_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02860;old_locus_tag=YPTS_0547 NC_010634.1 Protein Homology CDS 600399 601124 . - 0 ID=cds539;Parent=gene569;Dbxref=Genbank:WP_011191649.1;Name=WP_011191649.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_011191649.1;transl_table=11 NC_010634.1 RefSeq gene 601452 601916 . - . ID=gene570;Name=YPTS_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02865 NC_010634.1 Protein Homology CDS 601452 601916 . - 0 ID=cds540;Parent=gene570;Dbxref=Genbank:WP_025470743.1;Name=WP_025470743.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_025470743.1;transl_table=11 NC_010634.1 RefSeq gene 602093 604231 . - . ID=gene571;Name=YPTS_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02870;old_locus_tag=YPTS_0550 NC_010634.1 Protein Homology CDS 602093 604231 . - 0 ID=cds541;Parent=gene571;Dbxref=Genbank:WP_002209296.1;Name=WP_002209296.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NC_010634.1 RefSeq gene 604665 605381 . - . ID=gene572;Name=YPTS_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02875;old_locus_tag=YPTS_0551 NC_010634.1 Protein Homology CDS 604665 605381 . - 0 ID=cds542;Parent=gene572;Dbxref=Genbank:WP_012413455.1;Name=WP_012413455.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_012413455.1;transl_table=11 NC_010634.1 RefSeq gene 605368 606246 . - . ID=gene573;Name=YPTS_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02880;old_locus_tag=YPTS_0552 NC_010634.1 Protein Homology CDS 605368 606246 . - 0 ID=cds543;Parent=gene573;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NC_010634.1 RefSeq gene 606239 607075 . - . ID=gene574;Name=YPTS_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02885;old_locus_tag=YPTS_0553 NC_010634.1 Protein Homology CDS 606239 607075 . - 0 ID=cds544;Parent=gene574;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NC_010634.1 RefSeq gene 607094 608143 . - . ID=gene575;Name=YPTS_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02890;old_locus_tag=YPTS_0554 NC_010634.1 Protein Homology CDS 607094 608143 . - 0 ID=cds545;Parent=gene575;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NC_010634.1 RefSeq gene 608239 609807 . - . ID=gene576;Name=YPTS_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02895;old_locus_tag=YPTS_0555 NC_010634.1 Protein Homology CDS 608239 609807 . - 0 ID=cds546;Parent=gene576;Dbxref=Genbank:WP_012105726.1;Name=WP_012105726.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012105726.1;transl_table=11 NC_010634.1 RefSeq repeat_region 610003 610172 . + . ID=id57;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 610280 610406 . + . ID=id58;gbkey=repeat_region NC_010634.1 RefSeq gene 610446 610904 . + . ID=gene577;Name=YPTS_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02900;old_locus_tag=YPTS_0556 NC_010634.1 Protein Homology CDS 610446 610904 . + 0 ID=cds547;Parent=gene577;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11 NC_010634.1 RefSeq gene 611167 612174 . - . ID=gene578;Name=YPTS_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02905;old_locus_tag=YPTS_0557 NC_010634.1 Protein Homology CDS 611167 612174 . - 0 ID=cds548;Parent=gene578;Dbxref=Genbank:WP_011191651.1;Name=WP_011191651.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_011191651.1;transl_table=11 NC_010634.1 RefSeq gene 612385 612816 . + . ID=gene579;Name=YPTS_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02910;old_locus_tag=YPTS_0558 NC_010634.1 Protein Homology CDS 612385 612816 . + 0 ID=cds549;Parent=gene579;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11 NC_010634.1 RefSeq repeat_region 612860 612974 . + . ID=id59;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 613008 613123 . + . ID=id60;gbkey=repeat_region NC_010634.1 RefSeq gene 613175 613678 . - . ID=gene580;Name=YPTS_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02915;old_locus_tag=YPTS_0559 NC_010634.1 Protein Homology CDS 613175 613678 . - 0 ID=cds550;Parent=gene580;Dbxref=Genbank:WP_011191652.1;Name=WP_011191652.1;gbkey=CDS;product=N-acetyltransferase;protein_id=WP_011191652.1;transl_table=11 NC_010634.1 RefSeq gene 613821 616718 . - . ID=gene581;Name=YPTS_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02920;old_locus_tag=YPTS_0560 NC_010634.1 Protein Homology CDS 613821 616718 . - 0 ID=cds551;Parent=gene581;Dbxref=Genbank:WP_011191653.1;Name=WP_011191653.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_011191653.1;transl_table=11 NC_010634.1 RefSeq gene 616731 617180 . - . ID=gene582;Name=YPTS_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02925;old_locus_tag=YPTS_0561 NC_010634.1 Protein Homology CDS 616731 617180 . - 0 ID=cds552;Parent=gene582;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NC_010634.1 RefSeq gene 617331 618842 . - . ID=gene583;Name=YPTS_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02930;old_locus_tag=YPTS_0562 NC_010634.1 Protein Homology CDS 617331 618842 . - 0 ID=cds553;Parent=gene583;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NC_010634.1 RefSeq gene 619122 620216 . + . ID=gene584;Name=YPTS_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02935;old_locus_tag=YPTS_0563 NC_010634.1 Protein Homology CDS 619122 620216 . + 0 ID=cds554;Parent=gene584;Dbxref=Genbank:WP_002209311.1;Name=WP_002209311.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NC_010634.1 RefSeq gene 620216 621292 . + . ID=gene585;Name=YPTS_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02940;old_locus_tag=YPTS_0564 NC_010634.1 Protein Homology CDS 620216 621292 . + 0 ID=cds555;Parent=gene585;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NC_010634.1 RefSeq gene 621397 621481 . + . ID=gene586;Name=YPTS_RS02945;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS02945;old_locus_tag=YPTS_R0020 NC_010634.1 tRNAscan-SE tRNA 621397 621481 . + . ID=rna29;Parent=gene586;anticodon=(pos:621431..621433);gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 621397 621481 . + . ID=id61;Parent=rna29;anticodon=(pos:621431..621433);gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq gene 621680 622946 . + . ID=gene587;Name=YPTS_RS02950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS02950;pseudo=true NC_010634.1 Protein Homology CDS 621680 622946 . + 0 ID=cds556;Parent=gene587;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_except=(pos:622157..622159%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 623196 626051 . - . ID=gene588;Name=YPTS_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02955;old_locus_tag=YPTS_0568 NC_010634.1 Protein Homology CDS 623196 626051 . - 0 ID=cds557;Parent=gene588;Dbxref=Genbank:WP_012413456.1;Name=WP_012413456.1;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=WP_012413456.1;transl_table=11 NC_010634.1 RefSeq gene 626045 628162 . + . ID=gene589;Name=YPTS_RS02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS02960;old_locus_tag=YPTS_0569;partial=true;pseudo=true;start_range=.,626045 NC_010634.1 Protein Homology CDS 626045 628162 . + 0 ID=cds558;Parent=gene589;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=PTS fructose transporter subunit IIA;pseudo=true;start_range=.,626045;transl_table=11 NC_010634.1 RefSeq gene 628224 628715 . - . ID=gene590;Name=YPTS_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02965;old_locus_tag=YPTS_0570 NC_010634.1 Protein Homology CDS 628224 628715 . - 0 ID=cds559;Parent=gene590;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11 NC_010634.1 RefSeq gene 629038 629328 . - . ID=gene591;Name=YPTS_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02970;old_locus_tag=YPTS_0571 NC_010634.1 Protein Homology CDS 629038 629328 . - 0 ID=cds560;Parent=gene591;Dbxref=Genbank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002209186.1;transl_table=11 NC_010634.1 RefSeq gene 629392 630267 . - . ID=gene592;Name=YPTS_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02975;old_locus_tag=YPTS_0572 NC_010634.1 Protein Homology CDS 629392 630267 . - 0 ID=cds561;Parent=gene592;Dbxref=Genbank:WP_011191661.1;Name=WP_011191661.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_011191661.1;transl_table=11 NC_010634.1 RefSeq gene 630323 631342 . - . ID=gene593;Name=YPTS_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02980;old_locus_tag=YPTS_0573 NC_010634.1 Protein Homology CDS 630323 631342 . - 0 ID=cds562;Parent=gene593;Dbxref=Genbank:WP_011191662.1;Name=WP_011191662.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_011191662.1;transl_table=11 NC_010634.1 RefSeq gene 631387 632388 . - . ID=gene594;Name=YPTS_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02985;old_locus_tag=YPTS_0574 NC_010634.1 Protein Homology CDS 631387 632388 . - 0 ID=cds563;Parent=gene594;Dbxref=Genbank:WP_012413458.1;Name=WP_012413458.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_012413458.1;transl_table=11 NC_010634.1 RefSeq gene 632385 633440 . - . ID=gene595;Name=YPTS_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02990;old_locus_tag=YPTS_0575 NC_010634.1 Protein Homology CDS 632385 633440 . - 0 ID=cds564;Parent=gene595;Dbxref=Genbank:WP_011191664.1;Name=WP_011191664.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_011191664.1;transl_table=11 NC_010634.1 RefSeq gene 633434 635017 . - . ID=gene596;Name=YPTS_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS02995;old_locus_tag=YPTS_0576 NC_010634.1 Protein Homology CDS 633434 635017 . - 0 ID=cds565;Parent=gene596;Dbxref=Genbank:WP_011191665.1;Name=WP_011191665.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_011191665.1;transl_table=11 NC_010634.1 RefSeq gene 635127 635333 . - . ID=gene597;Name=YPTS_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03000 NC_010634.1 Protein Homology CDS 635127 635333 . - 0 ID=cds566;Parent=gene597;Dbxref=Genbank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;product=membrane protein;protein_id=WP_002221620.1;transl_table=11 NC_010634.1 RefSeq gene 635362 636357 . + . ID=gene598;Name=YPTS_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03005;old_locus_tag=YPTS_0577 NC_010634.1 Protein Homology CDS 635362 636357 . + 0 ID=cds567;Parent=gene598;Dbxref=Genbank:WP_012413459.1;Name=WP_012413459.1;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012413459.1;transl_table=11 NC_010634.1 RefSeq gene 636528 638120 . + . ID=gene599;Name=YPTS_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03010;old_locus_tag=YPTS_0578 NC_010634.1 Protein Homology CDS 636528 638120 . + 0 ID=cds568;Parent=gene599;Dbxref=Genbank:WP_002230543.1;Name=WP_002230543.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002230543.1;transl_table=11 NC_010634.1 RefSeq gene 638466 639629 . + . ID=gene600;Name=YPTS_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03015;old_locus_tag=YPTS_0579 NC_010634.1 Protein Homology CDS 638466 639629 . + 0 ID=cds569;Parent=gene600;Dbxref=Genbank:WP_024063089.1;Name=WP_024063089.1;gbkey=CDS;product=LPS core heptosyltransferase;protein_id=WP_024063089.1;transl_table=11 NC_010634.1 RefSeq gene 639677 640903 . + . ID=gene601;Name=YPTS_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03020;old_locus_tag=YPTS_0580 NC_010634.1 Protein Homology CDS 639677 640903 . + 0 ID=cds570;Parent=gene601;Dbxref=Genbank:WP_012413460.1;Name=WP_012413460.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_012413460.1;transl_table=11 NC_010634.1 RefSeq gene 641269 642537 . + . ID=gene602;Name=YPTS_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03025;old_locus_tag=YPTS_0581 NC_010634.1 Protein Homology CDS 641269 642537 . + 0 ID=cds571;Parent=gene602;Dbxref=Genbank:WP_012413461.1;Name=WP_012413461.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_012413461.1;transl_table=11 NC_010634.1 RefSeq gene 642584 643762 . + . ID=gene603;Name=YPTS_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03030;old_locus_tag=YPTS_0582 NC_010634.1 Protein Homology CDS 642584 643762 . + 0 ID=cds572;Parent=gene603;Dbxref=Genbank:WP_011191670.1;Name=WP_011191670.1;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=WP_011191670.1;transl_table=11 NC_010634.1 RefSeq gene 643764 644039 . + . ID=gene604;Name=YPTS_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03035;old_locus_tag=YPTS_0583 NC_010634.1 Protein Homology CDS 643764 644039 . + 0 ID=cds573;Parent=gene604;Dbxref=Genbank:WP_011191671.1;Name=WP_011191671.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191671.1;transl_table=11 NC_010634.1 RefSeq gene 644041 644877 . + . ID=gene605;Name=YPTS_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03040;old_locus_tag=YPTS_0584 NC_010634.1 Protein Homology CDS 644041 644877 . + 0 ID=cds574;Parent=gene605;Dbxref=Genbank:WP_011191672.1;Name=WP_011191672.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191672.1;transl_table=11 NC_010634.1 RefSeq gene 644910 646136 . + . ID=gene606;Name=YPTS_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03045;old_locus_tag=YPTS_0585 NC_010634.1 Protein Homology CDS 644910 646136 . + 0 ID=cds575;Parent=gene606;Dbxref=Genbank:WP_011191673.1;Name=WP_011191673.1;gbkey=CDS;product=molybdopterin biosynthesis protein;protein_id=WP_011191673.1;transl_table=11 NC_010634.1 RefSeq gene 647052 647249 . + . ID=gene607;Name=YPTS_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21610 NC_010634.1 Protein Homology CDS 647052 647249 . + 0 ID=cds576;Parent=gene607;Dbxref=Genbank:WP_011191675.1;Name=WP_011191675.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191675.1;transl_table=11 NC_010634.1 RefSeq gene 647276 647509 . + . ID=gene608;Name=YPTS_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03055;old_locus_tag=YPTS_0586 NC_010634.1 Protein Homology CDS 647276 647509 . + 0 ID=cds577;Parent=gene608;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11 NC_010634.1 RefSeq gene 647561 648643 . + . ID=gene609;Name=YPTS_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03060;old_locus_tag=YPTS_0587 NC_010634.1 Protein Homology CDS 647561 648643 . + 0 ID=cds578;Parent=gene609;Dbxref=Genbank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209199.1;transl_table=11 NC_010634.1 RefSeq gene 648643 651729 . + . ID=gene610;Name=YPTS_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03065;old_locus_tag=YPTS_0588 NC_010634.1 Protein Homology CDS 648643 651729 . + 0 ID=cds579;Parent=gene610;Dbxref=Genbank:WP_011191676.1;Name=WP_011191676.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_011191676.1;transl_table=11 NC_010634.1 RefSeq gene 651765 651958 . - . ID=gene611;Name=YPTS_RS03070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS03070;pseudo=true NC_010634.1 Protein Homology CDS 651765 651958 . - 0 ID=cds580;Parent=gene611;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 652092 652388 . - . ID=gene612;Name=YPTS_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03075;old_locus_tag=YPTS_0589 NC_010634.1 Protein Homology CDS 652092 652388 . - 0 ID=cds581;Parent=gene612;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NC_010634.1 RefSeq gene 652571 652894 . - . ID=gene613;Name=YPTS_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03080 NC_010634.1 Protein Homology CDS 652571 652894 . - 0 ID=cds582;Parent=gene613;Dbxref=Genbank:WP_042592862.1;Name=WP_042592862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592862.1;transl_table=11 NC_010634.1 RefSeq gene 653225 654310 . + . ID=gene614;Name=YPTS_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03085;old_locus_tag=YPTS_0591 NC_010634.1 Protein Homology CDS 653225 654310 . + 0 ID=cds583;Parent=gene614;Dbxref=Genbank:WP_002209202.1;Name=WP_002209202.1;gbkey=CDS;product=pectinesterase;protein_id=WP_002209202.1;transl_table=11 NC_010634.1 RefSeq gene 654851 656023 . - . ID=gene615;Name=YPTS_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03090;old_locus_tag=YPTS_0592 NC_010634.1 Protein Homology CDS 654851 656023 . - 0 ID=cds584;Parent=gene615;Dbxref=Genbank:WP_011191678.1;Name=WP_011191678.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_011191678.1;transl_table=11 NC_010634.1 RefSeq gene 656272 656604 . + . ID=gene616;Name=YPTS_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03095;old_locus_tag=YPTS_0593 NC_010634.1 Protein Homology CDS 656272 656604 . + 0 ID=cds585;Parent=gene616;Dbxref=Genbank:WP_012413464.1;Name=WP_012413464.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413464.1;transl_table=11 NC_010634.1 RefSeq gene 656774 656860 . - . ID=gene617;Name=YPTS_RS03100;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS03100;old_locus_tag=YPTS_R0082 NC_010634.1 tRNAscan-SE tRNA 656774 656860 . - . ID=rna30;Parent=gene617;anticodon=(pos:complement(656824..656826));gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 656774 656860 . - . ID=id62;Parent=rna30;anticodon=(pos:complement(656824..656826));gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq gene 656956 657042 . - . ID=gene618;Name=YPTS_RS03105;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS03105;old_locus_tag=YPTS_R0081 NC_010634.1 tRNAscan-SE tRNA 656956 657042 . - . ID=rna31;Parent=gene618;anticodon=(pos:complement(657006..657008));gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 656956 657042 . - . ID=id63;Parent=rna31;anticodon=(pos:complement(657006..657008));gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq gene 657139 657225 . - . ID=gene619;Name=YPTS_RS03110;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS03110;old_locus_tag=YPTS_R0080 NC_010634.1 tRNAscan-SE tRNA 657139 657225 . - . ID=rna32;Parent=gene619;anticodon=(pos:complement(657189..657191));gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 657139 657225 . - . ID=id64;Parent=rna32;anticodon=(pos:complement(657189..657191));gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq gene 657482 658525 . - . ID=gene620;Name=YPTS_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03115;old_locus_tag=YPTS_0594 NC_010634.1 Protein Homology CDS 657482 658525 . - 0 ID=cds586;Parent=gene620;Dbxref=Genbank:WP_011191679.1;Name=WP_011191679.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase C;protein_id=WP_011191679.1;transl_table=11 NC_010634.1 RefSeq gene 658638 659075 . + . ID=gene621;Name=YPTS_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03120;old_locus_tag=YPTS_0595 NC_010634.1 Protein Homology CDS 658638 659075 . + 0 ID=cds587;Parent=gene621;Dbxref=Genbank:WP_011191680.1;Name=WP_011191680.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_011191680.1;transl_table=11 NC_010634.1 RefSeq gene 659020 659463 . + . ID=gene622;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YPTS_RS03125;old_locus_tag=YPTS_0596 NC_010634.1 Protein Homology CDS 659020 659463 . + 0 ID=cds588;Parent=gene622;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NC_010634.1 RefSeq gene 659641 661230 . + . ID=gene623;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YPTS_RS03130;old_locus_tag=YPTS_0597 NC_010634.1 Protein Homology CDS 659641 661230 . + 0 ID=cds589;Parent=gene623;Dbxref=Genbank:WP_011191681.1;Name=WP_011191681.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_011191681.1;transl_table=11 NC_010634.1 RefSeq gene 661558 662172 . + . ID=gene624;Name=YPTS_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03135;old_locus_tag=YPTS_0598 NC_010634.1 Protein Homology CDS 661558 662172 . + 0 ID=cds590;Parent=gene624;Dbxref=Genbank:WP_012413465.1;Name=WP_012413465.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413465.1;transl_table=11 NC_010634.1 RefSeq gene 662339 662500 . + . ID=gene625;Name=YPTS_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03140;old_locus_tag=YPTS_0599 NC_010634.1 Protein Homology CDS 662339 662500 . + 0 ID=cds591;Parent=gene625;Dbxref=Genbank:WP_011191683.1;Name=WP_011191683.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191683.1;transl_table=11 NC_010634.1 RefSeq gene 662574 663845 . + . ID=gene626;Name=YPTS_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03145;old_locus_tag=YPTS_0600 NC_010634.1 Protein Homology CDS 662574 663845 . + 0 ID=cds592;Parent=gene626;Dbxref=Genbank:WP_024063094.1;Name=WP_024063094.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063094.1;transl_table=11 NC_010634.1 RefSeq gene 663882 664670 . + . ID=gene627;Name=YPTS_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03150;old_locus_tag=YPTS_0601 NC_010634.1 Protein Homology CDS 663882 664670 . + 0 ID=cds593;Parent=gene627;Dbxref=Genbank:WP_011191685.1;Name=WP_011191685.1;gbkey=CDS;product=DNAse;protein_id=WP_011191685.1;transl_table=11 NC_010634.1 RefSeq repeat_region 664732 664903 . + . ID=id65;gbkey=repeat_region NC_010634.1 RefSeq gene 665069 666346 . + . ID=gene628;Name=YPTS_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03155;old_locus_tag=YPTS_0602 NC_010634.1 Protein Homology CDS 665069 666346 . + 0 ID=cds594;Parent=gene628;Dbxref=Genbank:WP_032466618.1;Name=WP_032466618.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_032466618.1;transl_table=11 NC_010634.1 RefSeq gene 666967 667764 . + . ID=gene629;Name=YPTS_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03160;old_locus_tag=YPTS_0603 NC_010634.1 Protein Homology CDS 666967 667764 . + 0 ID=cds595;Parent=gene629;Dbxref=Genbank:WP_002216078.1;Name=WP_002216078.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase 2;protein_id=WP_002216078.1;transl_table=11 NC_010634.1 RefSeq gene 667885 669207 . + . ID=gene630;Name=YPTS_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03165;old_locus_tag=YPTS_0604 NC_010634.1 Protein Homology CDS 667885 669207 . + 0 ID=cds596;Parent=gene630;Dbxref=Genbank:WP_011191687.1;Name=WP_011191687.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_011191687.1;transl_table=11 NC_010634.1 RefSeq gene 669339 670562 . + . ID=gene631;Name=YPTS_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03170;old_locus_tag=YPTS_0605 NC_010634.1 Protein Homology CDS 669339 670562 . + 0 ID=cds597;Parent=gene631;Dbxref=Genbank:WP_011191688.1;Name=WP_011191688.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_011191688.1;transl_table=11 NC_010634.1 RefSeq gene 670687 671406 . + . ID=gene632;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YPTS_RS03175;old_locus_tag=YPTS_0606 NC_010634.1 Protein Homology CDS 670687 671406 . + 0 ID=cds598;Parent=gene632;Dbxref=Genbank:WP_011191689.1;Name=WP_011191689.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_011191689.1;transl_table=11 NC_010634.1 RefSeq gene 671518 672219 . - . ID=gene633;Name=YPTS_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03180;old_locus_tag=YPTS_0607 NC_010634.1 Protein Homology CDS 671518 672219 . - 0 ID=cds599;Parent=gene633;Dbxref=Genbank:WP_012105708.1;Name=WP_012105708.1;gbkey=CDS;product=gluconolaconase;protein_id=WP_012105708.1;transl_table=11 NC_010634.1 RefSeq gene 672457 673437 . + . ID=gene634;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YPTS_RS03185;old_locus_tag=YPTS_0608 NC_010634.1 Protein Homology CDS 672457 673437 . + 0 ID=cds600;Parent=gene634;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NC_010634.1 RefSeq gene 673556 674938 . + . ID=gene635;Name=YPTS_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03190;old_locus_tag=YPTS_0609 NC_010634.1 Protein Homology CDS 673556 674938 . + 0 ID=cds601;Parent=gene635;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NC_010634.1 RefSeq gene 675097 676368 . + . ID=gene636;Name=YPTS_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03195;old_locus_tag=YPTS_0610 NC_010634.1 Protein Homology CDS 675097 676368 . + 0 ID=cds602;Parent=gene636;Dbxref=Genbank:WP_002209221.1;Name=WP_002209221.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_002209221.1;transl_table=11 NC_010634.1 RefSeq gene 676525 677655 . + . ID=gene637;Name=YPTS_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03200;old_locus_tag=YPTS_0611 NC_010634.1 Protein Homology CDS 676525 677655 . + 0 ID=cds603;Parent=gene637;Dbxref=Genbank:WP_011191690.1;Name=WP_011191690.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_011191690.1;transl_table=11 NC_010634.1 RefSeq gene 677816 679483 . - . ID=gene638;Name=YPTS_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03205;old_locus_tag=YPTS_0612 NC_010634.1 Protein Homology CDS 677816 679483 . - 0 ID=cds604;Parent=gene638;Dbxref=Genbank:WP_011191691.1;Name=WP_011191691.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_011191691.1;transl_table=11 NC_010634.1 RefSeq gene 679666 680172 . - . ID=gene639;Name=YPTS_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03210;old_locus_tag=YPTS_0613 NC_010634.1 Protein Homology CDS 679666 680172 . - 0 ID=cds605;Parent=gene639;Dbxref=Genbank:WP_012413468.1;Name=WP_012413468.1;gbkey=CDS;product=cell envelope biogenesis protein OmpA;protein_id=WP_012413468.1;transl_table=11 NC_010634.1 RefSeq gene 680178 681479 . - . ID=gene640;Name=YPTS_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03215;old_locus_tag=YPTS_0614 NC_010634.1 Protein Homology CDS 680178 681479 . - 0 ID=cds606;Parent=gene640;Dbxref=Genbank:WP_002209224.1;Name=WP_002209224.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209224.1;transl_table=11 NC_010634.1 RefSeq gene 681476 682099 . - . ID=gene641;Name=YPTS_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03220;old_locus_tag=YPTS_0615 NC_010634.1 Protein Homology CDS 681476 682099 . - 0 ID=cds607;Parent=gene641;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11 NC_010634.1 RefSeq gene 682474 685200 . - . ID=gene642;Name=YPTS_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03225;old_locus_tag=YPTS_0616 NC_010634.1 Protein Homology CDS 682474 685200 . - 0 ID=cds608;Parent=gene642;Dbxref=Genbank:WP_011191693.1;Name=WP_011191693.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_011191693.1;transl_table=11 NC_010634.1 RefSeq gene 685770 687689 . + . ID=gene643;Name=YPTS_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03230;old_locus_tag=YPTS_0617 NC_010634.1 Protein Homology CDS 685770 687689 . + 0 ID=cds609;Parent=gene643;Dbxref=Genbank:WP_011191694.1;Name=WP_011191694.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_011191694.1;transl_table=11 NC_010634.1 RefSeq gene 687945 688337 . + . ID=gene644;Name=YPTS_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03235;old_locus_tag=YPTS_0618 NC_010634.1 Protein Homology CDS 687945 688337 . + 0 ID=cds610;Parent=gene644;Dbxref=Genbank:WP_002209228.1;Name=WP_002209228.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NC_010634.1 RefSeq gene 688334 688876 . - . ID=gene645;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YPTS_RS03240;old_locus_tag=YPTS_0619 NC_010634.1 Protein Homology CDS 688334 688876 . - 0 ID=cds611;Parent=gene645;Dbxref=Genbank:WP_011191695.1;Name=WP_011191695.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_011191695.1;transl_table=11 NC_010634.1 RefSeq gene 688986 689633 . + . ID=gene646;Name=YPTS_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03245;old_locus_tag=YPTS_0620 NC_010634.1 Protein Homology CDS 688986 689633 . + 0 ID=cds612;Parent=gene646;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NC_010634.1 RefSeq gene 689630 690496 . - . ID=gene647;Name=YPTS_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03250;old_locus_tag=YPTS_0621 NC_010634.1 Protein Homology CDS 689630 690496 . - 0 ID=cds613;Parent=gene647;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11 NC_010634.1 RefSeq gene 690722 691189 . + . ID=gene648;Name=YPTS_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03255;old_locus_tag=YPTS_0623 NC_010634.1 Protein Homology CDS 690722 691189 . + 0 ID=cds614;Parent=gene648;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11 NC_010634.1 RefSeq gene 691363 692079 . - . ID=gene649;Name=YPTS_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03260;old_locus_tag=YPTS_0624 NC_010634.1 Protein Homology CDS 691363 692079 . - 0 ID=cds615;Parent=gene649;Dbxref=Genbank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209234.1;transl_table=11 NC_010634.1 RefSeq gene 693183 695642 . + . ID=gene650;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=YPTS_RS03265;old_locus_tag=YPTS_0626 NC_010634.1 Protein Homology CDS 693183 695642 . + 0 ID=cds616;Parent=gene650;Dbxref=Genbank:WP_002209237.1;Name=WP_002209237.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=WP_002209237.1;transl_table=11 NC_010634.1 RefSeq gene 695645 696574 . + . ID=gene651;Name=YPTS_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03270;old_locus_tag=YPTS_0627 NC_010634.1 Protein Homology CDS 695645 696574 . + 0 ID=cds617;Parent=gene651;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NC_010634.1 RefSeq gene 696578 697867 . + . ID=gene652;Name=YPTS_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03275;old_locus_tag=YPTS_0628 NC_010634.1 Protein Homology CDS 696578 697867 . + 0 ID=cds618;Parent=gene652;Dbxref=Genbank:WP_002209239.1;Name=WP_002209239.1;gbkey=CDS;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NC_010634.1 RefSeq gene 698684 699460 . - . ID=gene653;Name=YPTS_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03280;old_locus_tag=YPTS_0629 NC_010634.1 Protein Homology CDS 698684 699460 . - 0 ID=cds619;Parent=gene653;Dbxref=Genbank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209240.1;transl_table=11 NC_010634.1 RefSeq gene 699975 700928 . + . ID=gene654;Name=YPTS_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03285;old_locus_tag=YPTS_0630 NC_010634.1 Protein Homology CDS 699975 700928 . + 0 ID=cds620;Parent=gene654;Dbxref=Genbank:WP_011191696.1;Name=WP_011191696.1;gbkey=CDS;product=transaldolase;protein_id=WP_011191696.1;transl_table=11 NC_010634.1 RefSeq gene 701216 701803 . + . ID=gene655;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=YPTS_RS03290;old_locus_tag=YPTS_0631 NC_010634.1 Protein Homology CDS 701216 701803 . + 0 ID=cds621;Parent=gene655;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11 NC_010634.1 RefSeq gene 701931 703310 . + . ID=gene656;Name=YPTS_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03295;old_locus_tag=YPTS_0632 NC_010634.1 Protein Homology CDS 701931 703310 . + 0 ID=cds622;Parent=gene656;Dbxref=Genbank:WP_011191697.1;Name=WP_011191697.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011191697.1;transl_table=11 NC_010634.1 RefSeq gene 703388 705844 . - . ID=gene657;Name=YPTS_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03300;old_locus_tag=YPTS_0633 NC_010634.1 Protein Homology CDS 703388 705844 . - 0 ID=cds623;Parent=gene657;Dbxref=Genbank:WP_011191698.1;Name=WP_011191698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191698.1;transl_table=11 NC_010634.1 RefSeq gene 706135 706746 . - . ID=gene658;Name=YPTS_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03305;old_locus_tag=YPTS_0634 NC_010634.1 Protein Homology CDS 706135 706746 . - 0 ID=cds624;Parent=gene658;Dbxref=Genbank:WP_011191699.1;Name=WP_011191699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191699.1;transl_table=11 NC_010634.1 RefSeq gene 707120 709030 . + . ID=gene659;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YPTS_RS03310;old_locus_tag=YPTS_0635 NC_010634.1 Protein Homology CDS 707120 709030 . + 0 ID=cds625;Parent=gene659;Dbxref=Genbank:WP_002209248.1;Name=WP_002209248.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11 NC_010634.1 RefSeq gene 709142 710281 . + . ID=gene660;Name=YPTS_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03315;old_locus_tag=YPTS_0636 NC_010634.1 Protein Homology CDS 709142 710281 . + 0 ID=cds626;Parent=gene660;Dbxref=Genbank:WP_002209249.1;Name=WP_002209249.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NC_010634.1 RefSeq gene 710524 711708 . + . ID=gene661;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=YPTS_RS03320;old_locus_tag=YPTS_0637 NC_010634.1 Protein Homology CDS 710524 711708 . + 0 ID=cds627;Parent=gene661;Dbxref=Genbank:WP_011191700.1;Name=WP_011191700.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_011191700.1;transl_table=11 NC_010634.1 RefSeq gene 711838 712737 . + . ID=gene662;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YPTS_RS03325;old_locus_tag=YPTS_0638 NC_010634.1 Protein Homology CDS 711838 712737 . + 0 ID=cds628;Parent=gene662;Dbxref=Genbank:WP_002220713.1;Name=WP_002220713.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_002220713.1;transl_table=11 NC_010634.1 RefSeq gene 712868 713131 . - . ID=gene663;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YPTS_RS03330;old_locus_tag=YPTS_0639 NC_010634.1 Protein Homology CDS 712868 713131 . - 0 ID=cds629;Parent=gene663;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NC_010634.1 RefSeq gene 713153 713329 . - . ID=gene664;Name=YPTS_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03335 NC_010634.1 Protein Homology CDS 713153 713329 . - 0 ID=cds630;Parent=gene664;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11 NC_010634.1 RefSeq gene 713546 714484 . + . ID=gene665;Name=YPTS_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03340;old_locus_tag=YPTS_0640 NC_010634.1 Protein Homology CDS 713546 714484 . + 0 ID=cds631;Parent=gene665;Dbxref=Genbank:WP_002210510.1;Name=WP_002210510.1;gbkey=CDS;product=riboflavin biosynthesis protein RibF;protein_id=WP_002210510.1;transl_table=11 NC_010634.1 RefSeq gene 714516 717332 . + . ID=gene666;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YPTS_RS03345;old_locus_tag=YPTS_0641 NC_010634.1 Protein Homology CDS 714516 717332 . + 0 ID=cds632;Parent=gene666;Dbxref=Genbank:WP_002210509.1;Name=WP_002210509.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_002210509.1;transl_table=11 NC_010634.1 RefSeq gene 717332 717841 . + . ID=gene667;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YPTS_RS03350;old_locus_tag=YPTS_0642 NC_010634.1 Protein Homology CDS 717332 717841 . + 0 ID=cds633;Parent=gene667;Dbxref=Genbank:WP_002210508.1;Name=WP_002210508.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_002210508.1;transl_table=11 NC_010634.1 RefSeq gene 717909 718367 . + . ID=gene668;Name=YPTS_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03355;old_locus_tag=YPTS_0643 NC_010634.1 Protein Homology CDS 717909 718367 . + 0 ID=cds634;Parent=gene668;Dbxref=Genbank:WP_002228112.1;Name=WP_002228112.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NC_010634.1 RefSeq gene 718348 719301 . + . ID=gene669;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YPTS_RS03360;old_locus_tag=YPTS_0644 NC_010634.1 Protein Homology CDS 718348 719301 . + 0 ID=cds635;Parent=gene669;Dbxref=Genbank:WP_011191701.1;Name=WP_011191701.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011191701.1;transl_table=11 NC_010634.1 RefSeq gene 719343 719555 . + . ID=gene670;Name=YPTS_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03365;old_locus_tag=YPTS_0645 NC_010634.1 GeneMarkS+ CDS 719343 719555 . + 0 ID=cds636;Parent=gene670;Dbxref=Genbank:WP_012413469.1;Name=WP_012413469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413469.1;transl_table=11 NC_010634.1 RefSeq gene 719769 720590 . + . ID=gene671;Name=YPTS_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03370;old_locus_tag=YPTS_0646 NC_010634.1 Protein Homology CDS 719769 720590 . + 0 ID=cds637;Parent=gene671;Dbxref=Genbank:WP_002210504.1;Name=WP_002210504.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11 NC_010634.1 RefSeq gene 721063 722238 . + . ID=gene672;Name=YPTS_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03375;old_locus_tag=YPTS_0647 NC_010634.1 Protein Homology CDS 721063 722238 . + 0 ID=cds638;Parent=gene672;Dbxref=Genbank:WP_002224759.1;Name=WP_002224759.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_002224759.1;transl_table=11 NC_010634.1 RefSeq gene 722254 725487 . + . ID=gene673;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YPTS_RS03380;old_locus_tag=YPTS_0648 NC_010634.1 Protein Homology CDS 722254 725487 . + 0 ID=cds639;Parent=gene673;Dbxref=Genbank:WP_011191702.1;Name=WP_011191702.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=WP_011191702.1;transl_table=11 NC_010634.1 RefSeq gene 725713 726327 . - . ID=gene674;Name=YPTS_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03385;old_locus_tag=YPTS_0649 NC_010634.1 Protein Homology CDS 725713 726327 . - 0 ID=cds640;Parent=gene674;Dbxref=Genbank:WP_011191703.1;Name=WP_011191703.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_011191703.1;transl_table=11 NC_010634.1 RefSeq gene 726642 727442 . + . ID=gene675;Name=YPTS_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03390;old_locus_tag=YPTS_0650 NC_010634.1 Protein Homology CDS 726642 727442 . + 0 ID=cds641;Parent=gene675;Dbxref=Genbank:WP_011191704.1;Name=WP_011191704.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191704.1;transl_table=11 NC_010634.1 RefSeq gene 727439 727903 . + . ID=gene676;Name=YPTS_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03395;old_locus_tag=YPTS_0651 NC_010634.1 Protein Homology CDS 727439 727903 . + 0 ID=cds642;Parent=gene676;Dbxref=Genbank:WP_032466075.1;Name=WP_032466075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466075.1;transl_table=11 NC_010634.1 RefSeq gene 728053 728535 . + . ID=gene677;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YPTS_RS03400;old_locus_tag=YPTS_0652 NC_010634.1 Protein Homology CDS 728053 728535 . + 0 ID=cds643;Parent=gene677;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NC_010634.1 RefSeq gene 729026 729246 . + . ID=gene678;Name=YPTS_RS03405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS03405;pseudo=true NC_010634.1 Protein Homology CDS 729026 729246 . + 0 ID=cds644;Parent=gene678;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 729374 729838 . + . ID=gene679;Name=YPTS_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03410;old_locus_tag=YPTS_0653 NC_010634.1 Protein Homology CDS 729374 729838 . + 0 ID=cds645;Parent=gene679;Dbxref=Genbank:WP_011191707.1;Name=WP_011191707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191707.1;transl_table=11 NC_010634.1 RefSeq gene 729928 730797 . - . ID=gene680;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YPTS_RS03415;old_locus_tag=YPTS_0654 NC_010634.1 Protein Homology CDS 729928 730797 . - 0 ID=cds646;Parent=gene680;Dbxref=Genbank:WP_011191708.1;Name=WP_011191708.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_011191708.1;transl_table=11 NC_010634.1 RefSeq gene 730814 731191 . - . ID=gene681;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=YPTS_RS03420;old_locus_tag=YPTS_0655 NC_010634.1 Protein Homology CDS 730814 731191 . - 0 ID=cds647;Parent=gene681;Dbxref=Genbank:WP_011191709.1;Name=WP_011191709.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_011191709.1;transl_table=11 NC_010634.1 RefSeq gene 731205 732023 . - . ID=gene682;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=YPTS_RS03425;old_locus_tag=YPTS_0656 NC_010634.1 Protein Homology CDS 731205 732023 . - 0 ID=cds648;Parent=gene682;Dbxref=Genbank:WP_011191710.1;Name=WP_011191710.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_011191710.1;transl_table=11 NC_010634.1 RefSeq gene 732016 733011 . - . ID=gene683;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YPTS_RS03430;old_locus_tag=YPTS_0657 NC_010634.1 Protein Homology CDS 732016 733011 . - 0 ID=cds649;Parent=gene683;Dbxref=Genbank:WP_011191711.1;Name=WP_011191711.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_011191711.1;transl_table=11 NC_010634.1 RefSeq gene 732995 734299 . - . ID=gene684;Name=YPTS_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03435;old_locus_tag=YPTS_0658 NC_010634.1 Protein Homology CDS 732995 734299 . - 0 ID=cds650;Parent=gene684;Dbxref=Genbank:WP_002210488.1;Name=WP_002210488.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_002210488.1;transl_table=11 NC_010634.1 RefSeq gene 734367 736709 . - . ID=gene685;Name=YPTS_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03440;old_locus_tag=YPTS_0659 NC_010634.1 Protein Homology CDS 734367 736709 . - 0 ID=cds651;Parent=gene685;Dbxref=Genbank:WP_011191712.1;Name=WP_011191712.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_011191712.1;transl_table=11 NC_010634.1 RefSeq gene 736894 737727 . + . ID=gene686;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YPTS_RS03445;old_locus_tag=YPTS_0660 NC_010634.1 Protein Homology CDS 736894 737727 . + 0 ID=cds652;Parent=gene686;Dbxref=Genbank:WP_011191713.1;Name=WP_011191713.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_011191713.1;transl_table=11 NC_010634.1 RefSeq gene 738044 738664 . - . ID=gene687;Name=YPTS_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03450;old_locus_tag=YPTS_0661 NC_010634.1 Protein Homology CDS 738044 738664 . - 0 ID=cds653;Parent=gene687;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11 NC_010634.1 RefSeq gene 739887 740630 . - . ID=gene688;Name=YPTS_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03455;old_locus_tag=YPTS_0662 NC_010634.1 Protein Homology CDS 739887 740630 . - 0 ID=cds654;Parent=gene688;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11 NC_010634.1 RefSeq gene 740960 741973 . + . ID=gene689;Name=YPTS_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03460;old_locus_tag=YPTS_0663 NC_010634.1 Protein Homology CDS 740960 741973 . + 0 ID=cds655;Parent=gene689;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11 NC_010634.1 RefSeq gene 741984 742544 . + . ID=gene690;Name=YPTS_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03465;old_locus_tag=YPTS_0664 NC_010634.1 Protein Homology CDS 741984 742544 . + 0 ID=cds656;Parent=gene690;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11 NC_010634.1 RefSeq gene 742553 744055 . + . ID=gene691;Name=YPTS_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03470;old_locus_tag=YPTS_0665 NC_010634.1 Protein Homology CDS 742553 744055 . + 0 ID=cds657;Parent=gene691;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11 NC_010634.1 RefSeq gene 744218 744736 . + . ID=gene692;Name=YPTS_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03475;old_locus_tag=YPTS_0666 NC_010634.1 Protein Homology CDS 744218 744736 . + 0 ID=cds658;Parent=gene692;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11 NC_010634.1 RefSeq gene 744810 745253 . + . ID=gene693;Name=YPTS_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03480;old_locus_tag=YPTS_0667 NC_010634.1 Protein Homology CDS 744810 745253 . + 0 ID=cds659;Parent=gene693;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11 NC_010634.1 RefSeq gene 745286 747130 . + . ID=gene694;Name=YPTS_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03485;old_locus_tag=YPTS_0668 NC_010634.1 Protein Homology CDS 745286 747130 . + 0 ID=cds660;Parent=gene694;Dbxref=Genbank:WP_011191714.1;Name=WP_011191714.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_011191714.1;transl_table=11 NC_010634.1 RefSeq gene 747123 748106 . + . ID=gene695;Name=YPTS_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03490;old_locus_tag=YPTS_0669 NC_010634.1 Protein Homology CDS 747123 748106 . + 0 ID=cds661;Parent=gene695;Dbxref=Genbank:WP_002210476.1;Name=WP_002210476.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210476.1;transl_table=11 NC_010634.1 RefSeq gene 748124 750712 . + . ID=gene696;Name=YPTS_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03495;old_locus_tag=YPTS_0670 NC_010634.1 Protein Homology CDS 748124 750712 . + 0 ID=cds662;Parent=gene696;Dbxref=Genbank:WP_012413471.1;Name=WP_012413471.1;gbkey=CDS;product=peptidase;protein_id=WP_012413471.1;transl_table=11 NC_010634.1 RefSeq gene 750816 753164 . + . ID=gene697;Name=YPTS_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03500;old_locus_tag=YPTS_0671 NC_010634.1 Protein Homology CDS 750816 753164 . + 0 ID=cds663;Parent=gene697;Dbxref=Genbank:WP_011191715.1;Name=WP_011191715.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_011191715.1;transl_table=11 NC_010634.1 RefSeq gene 753177 755396 . + . ID=gene698;Name=YPTS_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03505;old_locus_tag=YPTS_0672 NC_010634.1 Protein Homology CDS 753177 755396 . + 0 ID=cds664;Parent=gene698;Dbxref=Genbank:WP_011191716.1;Name=WP_011191716.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191716.1;transl_table=11 NC_010634.1 RefSeq gene 755422 756525 . + . ID=gene699;Name=YPTS_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03510;old_locus_tag=YPTS_0673 NC_010634.1 Protein Homology CDS 755422 756525 . + 0 ID=cds665;Parent=gene699;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11 NC_010634.1 RefSeq gene 756518 757135 . + . ID=gene700;Name=YPTS_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03515;old_locus_tag=YPTS_0674 NC_010634.1 Protein Homology CDS 756518 757135 . + 0 ID=cds666;Parent=gene700;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11 NC_010634.1 RefSeq gene 757141 757506 . + . ID=gene701;Name=YPTS_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03520;old_locus_tag=YPTS_0675 NC_010634.1 Protein Homology CDS 757141 757506 . + 0 ID=cds667;Parent=gene701;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11 NC_010634.1 RefSeq gene 757499 757990 . + . ID=gene702;Name=YPTS_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03525;old_locus_tag=YPTS_0676 NC_010634.1 Protein Homology CDS 757499 757990 . + 0 ID=cds668;Parent=gene702;Dbxref=Genbank:WP_011191717.1;Name=WP_011191717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191717.1;transl_table=11 NC_010634.1 RefSeq gene 758110 759465 . + . ID=gene703;Name=YPTS_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03530;old_locus_tag=YPTS_0677 NC_010634.1 Protein Homology CDS 758110 759465 . + 0 ID=cds669;Parent=gene703;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11 NC_010634.1 RefSeq gene 759462 761072 . + . ID=gene704;Name=YPTS_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03535;old_locus_tag=YPTS_0678 NC_010634.1 Protein Homology CDS 759462 761072 . + 0 ID=cds670;Parent=gene704;Dbxref=Genbank:WP_011191718.1;Name=WP_011191718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191718.1;transl_table=11 NC_010634.1 RefSeq gene 761081 764575 . + . ID=gene705;Name=YPTS_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03540;old_locus_tag=YPTS_0679 NC_010634.1 Protein Homology CDS 761081 764575 . + 0 ID=cds671;Parent=gene705;Dbxref=Genbank:WP_012413472.1;Name=WP_012413472.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413472.1;transl_table=11 NC_010634.1 RefSeq gene 764597 764950 . + . ID=gene706;Name=YPTS_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03545;old_locus_tag=YPTS_0680 NC_010634.1 Protein Homology CDS 764597 764950 . + 0 ID=cds672;Parent=gene706;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11 NC_010634.1 RefSeq repeat_region 764993 765163 . + . ID=id66;gbkey=repeat_region NC_010634.1 RefSeq gene 765206 768112 . - . ID=gene707;Name=YPTS_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03550;old_locus_tag=YPTS_0682 NC_010634.1 Protein Homology CDS 765206 768112 . - 0 ID=cds673;Parent=gene707;Dbxref=Genbank:WP_011191719.1;Name=WP_011191719.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_011191719.1;transl_table=11 NC_010634.1 RefSeq gene 768573 770942 . - . ID=gene708;Name=YPTS_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03555;old_locus_tag=YPTS_0683 NC_010634.1 Protein Homology CDS 768573 770942 . - 0 ID=cds674;Parent=gene708;Dbxref=Genbank:WP_011191720.1;Name=WP_011191720.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase;protein_id=WP_011191720.1;transl_table=11 NC_010634.1 RefSeq gene 771138 771905 . + . ID=gene709;Name=YPTS_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03560;old_locus_tag=YPTS_0684 NC_010634.1 Protein Homology CDS 771138 771905 . + 0 ID=cds675;Parent=gene709;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11 NC_010634.1 RefSeq gene 771974 772684 . - . ID=gene710;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YPTS_RS03565;old_locus_tag=YPTS_0685 NC_010634.1 Protein Homology CDS 771974 772684 . - 0 ID=cds676;Parent=gene710;Dbxref=Genbank:WP_011191721.1;Name=WP_011191721.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_011191721.1;transl_table=11 NC_010634.1 RefSeq gene 772671 774278 . - . ID=gene711;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YPTS_RS03570;old_locus_tag=YPTS_0686 NC_010634.1 Protein Homology CDS 772671 774278 . - 0 ID=cds677;Parent=gene711;Dbxref=Genbank:WP_011191722.1;Name=WP_011191722.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_011191722.1;transl_table=11 NC_010634.1 RefSeq gene 774254 775300 . - . ID=gene712;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=YPTS_RS03575;old_locus_tag=YPTS_0687 NC_010634.1 Protein Homology CDS 774254 775300 . - 0 ID=cds678;Parent=gene712;Dbxref=Genbank:WP_002210462.1;Name=WP_002210462.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_002210462.1;transl_table=11 NC_010634.1 RefSeq gene 775892 777394 . + . ID=gene713;Name=YPTS_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03580;old_locus_tag=YPTS_0689 NC_010634.1 Protein Homology CDS 775892 777394 . + 0 ID=cds679;Parent=gene713;Dbxref=Genbank:WP_011191723.1;Name=WP_011191723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191723.1;transl_table=11 NC_010634.1 RefSeq gene 777642 777770 . - . ID=gene714;Name=YPTS_RS03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS03585;old_locus_tag=YPTS_0690;partial=true;pseudo=true;start_range=.,777642 NC_010634.1 Protein Homology CDS 777642 777770 . - 0 ID=cds680;Parent=gene714;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,777642;transl_table=11 NC_010634.1 RefSeq gene 777763 778207 . - . ID=gene715;Name=YPTS_RS03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS03590;old_locus_tag=YPTS_0691;partial=true;pseudo=true;start_range=.,777763 NC_010634.1 Protein Homology CDS 777763 778207 . - 0 ID=cds681;Parent=gene715;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,777763;transl_table=11 NC_010634.1 RefSeq gene 778317 779978 . - . ID=gene716;Name=YPTS_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03595;old_locus_tag=YPTS_0692 NC_010634.1 Protein Homology CDS 778317 779978 . - 0 ID=cds682;Parent=gene716;Dbxref=Genbank:WP_011191725.1;Name=WP_011191725.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191725.1;transl_table=11 NC_010634.1 RefSeq gene 780340 780513 . + . ID=gene717;Name=YPTS_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03600 NC_010634.1 Protein Homology CDS 780340 780513 . + 0 ID=cds683;Parent=gene717;Dbxref=Genbank:WP_041175438.1;Name=WP_041175438.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175438.1;transl_table=11 NC_010634.1 RefSeq gene 780624 781805 . + . ID=gene718;Name=YPTS_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03605;old_locus_tag=YPTS_0693 NC_010634.1 Protein Homology CDS 780624 781805 . + 0 ID=cds684;Parent=gene718;Dbxref=Genbank:WP_011191726.1;Name=WP_011191726.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011191726.1;transl_table=11 NC_010634.1 RefSeq gene 782065 782667 . - . ID=gene719;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YPTS_RS03610;old_locus_tag=YPTS_0695 NC_010634.1 Protein Homology CDS 782065 782667 . - 0 ID=cds685;Parent=gene719;Dbxref=Genbank:WP_002210456.1;Name=WP_002210456.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NC_010634.1 RefSeq gene 782682 784112 . - . ID=gene720;Name=YPTS_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03615;old_locus_tag=YPTS_0696 NC_010634.1 Protein Homology CDS 782682 784112 . - 0 ID=cds686;Parent=gene720;Dbxref=Genbank:WP_011191727.1;Name=WP_011191727.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_011191727.1;transl_table=11 NC_010634.1 RefSeq gene 784114 785205 . - . ID=gene721;Name=YPTS_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03620;old_locus_tag=YPTS_0697 NC_010634.1 Protein Homology CDS 784114 785205 . - 0 ID=cds687;Parent=gene721;Dbxref=Genbank:WP_011191728.1;Name=WP_011191728.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_011191728.1;transl_table=11 NC_010634.1 RefSeq gene 785208 786770 . - . ID=gene722;Name=YPTS_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03625;old_locus_tag=YPTS_0698 NC_010634.1 Protein Homology CDS 785208 786770 . - 0 ID=cds688;Parent=gene722;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NC_010634.1 RefSeq gene 787117 787308 . - . ID=gene723;Name=YPTS_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03630;old_locus_tag=YPTS_0699 NC_010634.1 Protein Homology CDS 787117 787308 . - 0 ID=cds689;Parent=gene723;Dbxref=Genbank:WP_012413476.1;Name=WP_012413476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413476.1;transl_table=11 NC_010634.1 RefSeq gene 787986 788942 . + . ID=gene724;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YPTS_RS03635;old_locus_tag=YPTS_0700 NC_010634.1 Protein Homology CDS 787986 788942 . + 0 ID=cds690;Parent=gene724;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11 NC_010634.1 RefSeq gene 789287 789493 . + . ID=gene725;Name=YPTS_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03640 NC_010634.1 Protein Homology CDS 789287 789493 . + 0 ID=cds691;Parent=gene725;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11 NC_010634.1 RefSeq gene 789490 791295 . + . ID=gene726;Name=YPTS_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03645;old_locus_tag=YPTS_0701 NC_010634.1 Protein Homology CDS 789490 791295 . + 0 ID=cds692;Parent=gene726;Dbxref=Genbank:WP_002216437.1;Name=WP_002216437.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002216437.1;transl_table=11 NC_010634.1 RefSeq gene 791326 791436 . + . ID=gene727;Name=YPTS_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03650 NC_010634.1 Protein Homology CDS 791326 791436 . + 0 ID=cds693;Parent=gene727;Dbxref=Genbank:WP_002228104.1;Name=WP_002228104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228104.1;transl_table=11 NC_010634.1 RefSeq gene 791755 793482 . + . ID=gene728;Name=YPTS_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03655;old_locus_tag=YPTS_0702 NC_010634.1 Protein Homology CDS 791755 793482 . + 0 ID=cds694;Parent=gene728;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11 NC_010634.1 RefSeq gene 793485 793979 . + . ID=gene729;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YPTS_RS03660;old_locus_tag=YPTS_0703 NC_010634.1 Protein Homology CDS 793485 793979 . + 0 ID=cds695;Parent=gene729;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11 NC_010634.1 RefSeq gene 794264 794380 . - . ID=gene730;Name=YPTS_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03665 NC_010634.1 Protein Homology CDS 794264 794380 . - 0 ID=cds696;Parent=gene730;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11 NC_010634.1 RefSeq gene 794447 795457 . + . ID=gene731;Name=YPTS_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03670;old_locus_tag=YPTS_0704 NC_010634.1 Protein Homology CDS 794447 795457 . + 0 ID=cds697;Parent=gene731;Dbxref=Genbank:WP_011191729.1;Name=WP_011191729.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191729.1;transl_table=11 NC_010634.1 RefSeq gene 795588 796028 . - . ID=gene732;Name=YPTS_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03675;old_locus_tag=YPTS_0705 NC_010634.1 Protein Homology CDS 795588 796028 . - 0 ID=cds698;Parent=gene732;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11 NC_010634.1 RefSeq repeat_region 796388 796561 . + . ID=id67;gbkey=repeat_region NC_010634.1 RefSeq gene 797130 797588 . + . ID=gene733;Name=YPTS_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03680;old_locus_tag=YPTS_0706 NC_010634.1 Protein Homology CDS 797130 797588 . + 0 ID=cds699;Parent=gene733;Dbxref=Genbank:WP_011191730.1;Name=WP_011191730.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_011191730.1;transl_table=11 NC_010634.1 RefSeq gene 797591 798553 . + . ID=gene734;Name=YPTS_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03685;old_locus_tag=YPTS_0707 NC_010634.1 Protein Homology CDS 797591 798553 . + 0 ID=cds700;Parent=gene734;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11 NC_010634.1 RefSeq gene 798550 798867 . + . ID=gene735;Name=YPTS_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03690;old_locus_tag=YPTS_0708 NC_010634.1 Protein Homology CDS 798550 798867 . + 0 ID=cds701;Parent=gene735;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NC_010634.1 RefSeq gene 798933 800696 . + . ID=gene736;Name=YPTS_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03695;old_locus_tag=YPTS_0709 NC_010634.1 Protein Homology CDS 798933 800696 . + 0 ID=cds702;Parent=gene736;Dbxref=Genbank:WP_011191731.1;Name=WP_011191731.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_011191731.1;transl_table=11 NC_010634.1 RefSeq gene 800683 802170 . + . ID=gene737;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YPTS_RS03700;old_locus_tag=YPTS_0710 NC_010634.1 Protein Homology CDS 800683 802170 . + 0 ID=cds703;Parent=gene737;Dbxref=Genbank:WP_012105673.1;Name=WP_012105673.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_012105673.1;transl_table=11 NC_010634.1 RefSeq gene 802167 803543 . + . ID=gene738;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YPTS_RS03705;old_locus_tag=YPTS_0711 NC_010634.1 Protein Homology CDS 802167 803543 . + 0 ID=cds704;Parent=gene738;Dbxref=Genbank:WP_011191733.1;Name=WP_011191733.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_011191733.1;transl_table=11 NC_010634.1 RefSeq gene 803537 804619 . + . ID=gene739;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YPTS_RS03710;old_locus_tag=YPTS_0712 NC_010634.1 Protein Homology CDS 803537 804619 . + 0 ID=cds705;Parent=gene739;Dbxref=Genbank:WP_002210437.1;Name=WP_002210437.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_002210437.1;transl_table=11 NC_010634.1 RefSeq gene 804622 805938 . + . ID=gene740;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YPTS_RS03715;old_locus_tag=YPTS_0713 NC_010634.1 Protein Homology CDS 804622 805938 . + 0 ID=cds706;Parent=gene740;Dbxref=Genbank:WP_011191734.1;Name=WP_011191734.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_011191734.1;transl_table=11 NC_010634.1 RefSeq gene 805938 807140 . + . ID=gene741;Name=YPTS_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03720;old_locus_tag=YPTS_0714 NC_010634.1 Protein Homology CDS 805938 807140 . + 0 ID=cds707;Parent=gene741;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NC_010634.1 RefSeq gene 807137 808207 . + . ID=gene742;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YPTS_RS03725;old_locus_tag=YPTS_0715 NC_010634.1 Protein Homology CDS 807137 808207 . + 0 ID=cds708;Parent=gene742;Dbxref=Genbank:WP_011191735.1;Name=WP_011191735.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_011191735.1;transl_table=11 NC_010634.1 RefSeq gene 808345 809820 . + . ID=gene743;Name=YPTS_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03730;old_locus_tag=YPTS_0716 NC_010634.1 Protein Homology CDS 808345 809820 . + 0 ID=cds709;Parent=gene743;Dbxref=Genbank:WP_002216457.1;Name=WP_002216457.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11 NC_010634.1 RefSeq gene 809813 810733 . + . ID=gene744;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=YPTS_RS03735;old_locus_tag=YPTS_0717 NC_010634.1 Protein Homology CDS 809813 810733 . + 0 ID=cds710;Parent=gene744;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NC_010634.1 RefSeq gene 810735 811562 . + . ID=gene745;Name=YPTS_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03740;old_locus_tag=YPTS_0718 NC_010634.1 Protein Homology CDS 810735 811562 . + 0 ID=cds711;Parent=gene745;Dbxref=Genbank:WP_011191736.1;Name=WP_011191736.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_011191736.1;transl_table=11 NC_010634.1 RefSeq gene 811589 812845 . + . ID=gene746;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YPTS_RS03745;old_locus_tag=YPTS_0719 NC_010634.1 Protein Homology CDS 811589 812845 . + 0 ID=cds712;Parent=gene746;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NC_010634.1 RefSeq gene 812918 814069 . + . ID=gene747;Name=YPTS_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03750;old_locus_tag=YPTS_0720 NC_010634.1 Protein Homology CDS 812918 814069 . + 0 ID=cds713;Parent=gene747;Dbxref=Genbank:WP_002210430.1;Name=WP_002210430.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NC_010634.1 RefSeq gene 814169 815089 . + . ID=gene748;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YPTS_RS03755;old_locus_tag=YPTS_0721 NC_010634.1 Protein Homology CDS 814169 815089 . + 0 ID=cds714;Parent=gene748;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NC_010634.1 RefSeq gene 815256 815780 . - . ID=gene749;Name=YPTS_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03760;old_locus_tag=YPTS_0722 NC_010634.1 Protein Homology CDS 815256 815780 . - 0 ID=cds715;Parent=gene749;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11 NC_010634.1 RefSeq gene 815809 816342 . + . ID=gene750;Name=YPTS_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03765;old_locus_tag=YPTS_0723 NC_010634.1 Protein Homology CDS 815809 816342 . + 0 ID=cds716;Parent=gene750;Dbxref=Genbank:WP_011191738.1;Name=WP_011191738.1;gbkey=CDS;product=secretion monitor;protein_id=WP_011191738.1;transl_table=11 NC_010634.1 RefSeq gene 816420 819134 . + . ID=gene751;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=YPTS_RS03770;old_locus_tag=YPTS_0724 NC_010634.1 Protein Homology CDS 816420 819134 . + 0 ID=cds717;Parent=gene751;Dbxref=Genbank:WP_002210426.1;Name=WP_002210426.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NC_010634.1 RefSeq repeat_region 819177 819352 . + . ID=id68;gbkey=repeat_region NC_010634.1 RefSeq gene 819429 819815 . + . ID=gene752;Name=YPTS_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03775;old_locus_tag=YPTS_0725 NC_010634.1 Protein Homology CDS 819429 819815 . + 0 ID=cds718;Parent=gene752;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11 NC_010634.1 RefSeq gene 819852 820040 . + . ID=gene753;Name=YPTS_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03780;old_locus_tag=YPTS_0726 NC_010634.1 Protein Homology CDS 819852 820040 . + 0 ID=cds719;Parent=gene753;Dbxref=Genbank:WP_012304583.1;Name=WP_012304583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304583.1;transl_table=11 NC_010634.1 RefSeq repeat_region 819885 820596 . + . ID=id69;gbkey=repeat_region NC_010634.1 RefSeq gene 820030 820488 . + . ID=gene754;Name=YPTS_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03785;old_locus_tag=YPTS_0727 NC_010634.1 Protein Homology CDS 820030 820488 . + 0 ID=cds720;Parent=gene754;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_010634.1 RefSeq gene 820678 820884 . - . ID=gene755;Name=YPTS_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03790;old_locus_tag=YPTS_0728 NC_010634.1 Protein Homology CDS 820678 820884 . - 0 ID=cds721;Parent=gene755;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NC_010634.1 RefSeq gene 821092 821844 . - . ID=gene756;Name=YPTS_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03795;old_locus_tag=YPTS_0729 NC_010634.1 Protein Homology CDS 821092 821844 . - 0 ID=cds722;Parent=gene756;Dbxref=Genbank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NC_010634.1 RefSeq gene 821841 822461 . - . ID=gene757;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YPTS_RS03800;old_locus_tag=YPTS_0730 NC_010634.1 Protein Homology CDS 821841 822461 . - 0 ID=cds723;Parent=gene757;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NC_010634.1 RefSeq gene 822471 822671 . - . ID=gene758;Name=YPTS_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03805;old_locus_tag=YPTS_0731 NC_010634.1 Protein Homology CDS 822471 822671 . - 0 ID=cds724;Parent=gene758;Dbxref=Genbank:WP_002354912.1;Name=WP_002354912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354912.1;transl_table=11 NC_010634.1 RefSeq gene 822757 823800 . + . ID=gene759;Name=YPTS_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03810;old_locus_tag=YPTS_0732 NC_010634.1 Protein Homology CDS 822757 823800 . + 0 ID=cds725;Parent=gene759;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NC_010634.1 RefSeq repeat_region 823921 825239 . + . ID=id70;gbkey=repeat_region NC_010634.1 RefSeq gene 823993 825201 . + . ID=gene760;Name=YPTS_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03815;old_locus_tag=YPTS_0733 NC_010634.1 Protein Homology CDS 823993 825201 . + 0 ID=cds726;Parent=gene760;Dbxref=Genbank:WP_012413477.1;Name=WP_012413477.1;gbkey=CDS;product=transposase;protein_id=WP_012413477.1;transl_table=11 NC_010634.1 RefSeq gene 825542 826741 . - . ID=gene761;Name=YPTS_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03820;old_locus_tag=YPTS_0734 NC_010634.1 Protein Homology CDS 825542 826741 . - 0 ID=cds727;Parent=gene761;Dbxref=Genbank:WP_011191739.1;Name=WP_011191739.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_011191739.1;transl_table=11 NC_010634.1 RefSeq gene 826738 828276 . - . ID=gene762;Name=YPTS_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03825;old_locus_tag=YPTS_0735 NC_010634.1 Protein Homology CDS 826738 828276 . - 0 ID=cds728;Parent=gene762;Dbxref=Genbank:WP_011191740.1;Name=WP_011191740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191740.1;transl_table=11 NC_010634.1 RefSeq gene 828269 828733 . - . ID=gene763;Name=YPTS_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03830;old_locus_tag=YPTS_0736 NC_010634.1 Protein Homology CDS 828269 828733 . - 0 ID=cds729;Parent=gene763;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11 NC_010634.1 RefSeq gene 828936 829844 . - . ID=gene764;Name=YPTS_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03835;old_locus_tag=YPTS_0737 NC_010634.1 Protein Homology CDS 828936 829844 . - 0 ID=cds730;Parent=gene764;Dbxref=Genbank:WP_002209324.1;Name=WP_002209324.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_002209324.1;transl_table=11 NC_010634.1 RefSeq gene 829957 830508 . + . ID=gene765;Name=YPTS_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03840;old_locus_tag=YPTS_0738 NC_010634.1 Protein Homology CDS 829957 830508 . + 0 ID=cds731;Parent=gene765;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11 NC_010634.1 RefSeq gene 830781 831635 . + . ID=gene766;Name=YPTS_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03845;old_locus_tag=YPTS_0739 NC_010634.1 Protein Homology CDS 830781 831635 . + 0 ID=cds732;Parent=gene766;Dbxref=Genbank:WP_012413478.1;Name=WP_012413478.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413478.1;transl_table=11 NC_010634.1 RefSeq gene 832037 833434 . - . ID=gene767;Name=YPTS_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03850;old_locus_tag=YPTS_0740 NC_010634.1 Protein Homology CDS 832037 833434 . - 0 ID=cds733;Parent=gene767;Dbxref=Genbank:WP_011191741.1;Name=WP_011191741.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_011191741.1;transl_table=11 NC_010634.1 RefSeq gene 834297 835061 . + . ID=gene768;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YPTS_RS03855;old_locus_tag=YPTS_0742 NC_010634.1 Protein Homology CDS 834297 835061 . + 0 ID=cds734;Parent=gene768;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11 NC_010634.1 RefSeq gene 835257 837920 . + . ID=gene769;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YPTS_RS03860;old_locus_tag=YPTS_0743 NC_010634.1 Protein Homology CDS 835257 837920 . + 0 ID=cds735;Parent=gene769;Dbxref=Genbank:WP_011191742.1;Name=WP_011191742.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_011191742.1;transl_table=11 NC_010634.1 RefSeq gene 837934 839508 . + . ID=gene770;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YPTS_RS03865;old_locus_tag=YPTS_0744 NC_010634.1 Protein Homology CDS 837934 839508 . + 0 ID=cds736;Parent=gene770;Dbxref=Genbank:WP_012413479.1;Name=WP_012413479.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_012413479.1;transl_table=11 NC_010634.1 RefSeq gene 839814 841238 . + . ID=gene771;Name=YPTS_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03870;old_locus_tag=YPTS_0745 NC_010634.1 Protein Homology CDS 839814 841238 . + 0 ID=cds737;Parent=gene771;Dbxref=Genbank:WP_002209332.1;Name=WP_002209332.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NC_010634.1 RefSeq gene 841798 844395 . + . ID=gene772;Name=YPTS_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03875;old_locus_tag=YPTS_0746 NC_010634.1 Protein Homology CDS 841798 844395 . + 0 ID=cds738;Parent=gene772;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NC_010634.1 RefSeq gene 844694 845053 . + . ID=gene773;Name=YPTS_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03880;old_locus_tag=YPTS_0747 NC_010634.1 Protein Homology CDS 844694 845053 . + 0 ID=cds739;Parent=gene773;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11 NC_010634.1 RefSeq gene 845178 846065 . - . ID=gene774;Name=YPTS_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03885;old_locus_tag=YPTS_0748 NC_010634.1 Protein Homology CDS 845178 846065 . - 0 ID=cds740;Parent=gene774;Dbxref=Genbank:WP_011191744.1;Name=WP_011191744.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_011191744.1;transl_table=11 NC_010634.1 RefSeq gene 846503 847297 . - . ID=gene775;Name=YPTS_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03890;old_locus_tag=YPTS_0750 NC_010634.1 Protein Homology CDS 846503 847297 . - 0 ID=cds741;Parent=gene775;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11 NC_010634.1 RefSeq gene 847375 848265 . - . ID=gene776;Name=YPTS_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03895;old_locus_tag=YPTS_0751 NC_010634.1 Protein Homology CDS 847375 848265 . - 0 ID=cds742;Parent=gene776;Dbxref=Genbank:WP_011191746.1;Name=WP_011191746.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_011191746.1;transl_table=11 NC_010634.1 RefSeq gene 848382 848729 . - . ID=gene777;Name=YPTS_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03900;old_locus_tag=YPTS_0752 NC_010634.1 Protein Homology CDS 848382 848729 . - 0 ID=cds743;Parent=gene777;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11 NC_010634.1 RefSeq gene 849046 850647 . + . ID=gene778;Name=YPTS_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03905;old_locus_tag=YPTS_0753 NC_010634.1 Protein Homology CDS 849046 850647 . + 0 ID=cds744;Parent=gene778;Dbxref=Genbank:WP_012413480.1;Name=WP_012413480.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=multicopper oxidase;protein_id=WP_012413480.1;transl_table=11 NC_010634.1 RefSeq gene 850867 851403 . + . ID=gene779;Name=YPTS_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03910;old_locus_tag=YPTS_0754 NC_010634.1 Protein Homology CDS 850867 851403 . + 0 ID=cds745;Parent=gene779;Dbxref=Genbank:WP_011191748.1;Name=WP_011191748.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_011191748.1;transl_table=11 NC_010634.1 RefSeq gene 851711 852373 . - . ID=gene780;Name=YPTS_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03915 NC_010634.1 Protein Homology CDS 851711 852373 . - 0 ID=cds746;Parent=gene780;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11 NC_010634.1 RefSeq gene 852609 853535 . + . ID=gene781;Name=YPTS_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03920;old_locus_tag=YPTS_0756 NC_010634.1 Protein Homology CDS 852609 853535 . + 0 ID=cds747;Parent=gene781;Dbxref=Genbank:WP_011191749.1;Name=WP_011191749.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191749.1;transl_table=11 NC_010634.1 RefSeq gene 853532 854302 . + . ID=gene782;Name=YPTS_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03925;old_locus_tag=YPTS_0757 NC_010634.1 Protein Homology CDS 853532 854302 . + 0 ID=cds748;Parent=gene782;Dbxref=Genbank:WP_002209344.1;Name=WP_002209344.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209344.1;transl_table=11 NC_010634.1 RefSeq gene 854504 855817 . + . ID=gene783;Name=YPTS_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03930;old_locus_tag=YPTS_0758 NC_010634.1 Protein Homology CDS 854504 855817 . + 0 ID=cds749;Parent=gene783;Dbxref=Genbank:WP_012413481.1;Name=WP_012413481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413481.1;transl_table=11 NC_010634.1 RefSeq gene 855981 856361 . - . ID=gene784;Name=YPTS_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03935;old_locus_tag=YPTS_0759 NC_010634.1 Protein Homology CDS 855981 856361 . - 0 ID=cds750;Parent=gene784;Dbxref=Genbank:WP_011191751.1;Name=WP_011191751.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_011191751.1;transl_table=11 NC_010634.1 RefSeq gene 856772 857626 . - . ID=gene785;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YPTS_RS03940;old_locus_tag=YPTS_0760 NC_010634.1 Protein Homology CDS 856772 857626 . - 0 ID=cds751;Parent=gene785;Dbxref=Genbank:WP_011191752.1;Name=WP_011191752.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_011191752.1;transl_table=11 NC_010634.1 RefSeq gene 857714 858511 . - . ID=gene786;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YPTS_RS03945;old_locus_tag=YPTS_0761 NC_010634.1 Protein Homology CDS 857714 858511 . - 0 ID=cds752;Parent=gene786;Dbxref=Genbank:WP_012304571.1;Name=WP_012304571.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_012304571.1;transl_table=11 NC_010634.1 RefSeq gene 858780 859259 . - . ID=gene787;Name=YPTS_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03950;old_locus_tag=YPTS_0762 NC_010634.1 Protein Homology CDS 858780 859259 . - 0 ID=cds753;Parent=gene787;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11 NC_010634.1 RefSeq gene 859267 860679 . - . ID=gene788;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YPTS_RS03955;old_locus_tag=YPTS_0763 NC_010634.1 Protein Homology CDS 859267 860679 . - 0 ID=cds754;Parent=gene788;Dbxref=Genbank:WP_041175488.1;Name=WP_041175488.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_041175488.1;transl_table=11 NC_010634.1 RefSeq gene 860822 861817 . - . ID=gene789;Name=YPTS_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03960;old_locus_tag=YPTS_0764 NC_010634.1 Protein Homology CDS 860822 861817 . - 0 ID=cds755;Parent=gene789;Dbxref=Genbank:WP_011191755.1;Name=WP_011191755.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_011191755.1;transl_table=11 NC_010634.1 RefSeq gene 862097 862552 . - . ID=gene790;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YPTS_RS03965;old_locus_tag=YPTS_0765 NC_010634.1 Protein Homology CDS 862097 862552 . - 0 ID=cds756;Parent=gene790;Dbxref=Genbank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_002209354.1;transl_table=11 NC_010634.1 RefSeq gene 862722 863459 . - . ID=gene791;Name=YPTS_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03970;old_locus_tag=YPTS_0766 NC_010634.1 Protein Homology CDS 862722 863459 . - 0 ID=cds757;Parent=gene791;Dbxref=Genbank:WP_032466625.1;Name=WP_032466625.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_032466625.1;transl_table=11 NC_010634.1 RefSeq gene 863593 864168 . - . ID=gene792;Name=YPTS_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03975;old_locus_tag=YPTS_0767 NC_010634.1 Protein Homology CDS 863593 864168 . - 0 ID=cds758;Parent=gene792;Dbxref=Genbank:WP_011191757.1;Name=WP_011191757.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_011191757.1;transl_table=11 NC_010634.1 RefSeq gene 864251 866812 . + . ID=gene793;Name=YPTS_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03980;old_locus_tag=YPTS_0769 NC_010634.1 Protein Homology CDS 864251 866812 . + 0 ID=cds759;Parent=gene793;Dbxref=Genbank:WP_041175581.1;Name=WP_041175581.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=ATP-dependent helicase HrpB;protein_id=WP_041175581.1;transl_table=11 NC_010634.1 RefSeq gene 866921 869401 . + . ID=gene794;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=YPTS_RS03985;old_locus_tag=YPTS_0770 NC_010634.1 Protein Homology CDS 866921 869401 . + 0 ID=cds760;Parent=gene794;Dbxref=Genbank:WP_011191759.1;Name=WP_011191759.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_011191759.1;transl_table=11 NC_010634.1 RefSeq gene 869723 870517 . + . ID=gene795;Name=YPTS_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03990;old_locus_tag=YPTS_0771 NC_010634.1 Protein Homology CDS 869723 870517 . + 0 ID=cds761;Parent=gene795;Dbxref=Genbank:WP_002209359.1;Name=WP_002209359.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_002209359.1;transl_table=11 NC_010634.1 RefSeq gene 870658 871569 . + . ID=gene796;Name=YPTS_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS03995;old_locus_tag=YPTS_0772 NC_010634.1 Protein Homology CDS 870658 871569 . + 0 ID=cds762;Parent=gene796;Dbxref=Genbank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_002209360.1;transl_table=11 NC_010634.1 RefSeq gene 871566 873563 . + . ID=gene797;Name=YPTS_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04000;old_locus_tag=YPTS_0773 NC_010634.1 Protein Homology CDS 871566 873563 . + 0 ID=cds763;Parent=gene797;Dbxref=Genbank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=WP_002209361.1;transl_table=11 NC_010634.1 RefSeq repeat_region 873765 873869 . + . ID=id71;gbkey=repeat_region NC_010634.1 RefSeq gene 873937 875217 . - . ID=gene798;Name=YPTS_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04005;old_locus_tag=YPTS_0774 NC_010634.1 Protein Homology CDS 873937 875217 . - 0 ID=cds764;Parent=gene798;Dbxref=Genbank:WP_011191761.1;Name=WP_011191761.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_011191761.1;transl_table=11 NC_010634.1 RefSeq gene 875598 877034 . + . ID=gene799;Name=YPTS_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04010;old_locus_tag=YPTS_0776 NC_010634.1 Protein Homology CDS 875598 877034 . + 0 ID=cds765;Parent=gene799;Dbxref=Genbank:WP_011191762.1;Name=WP_011191762.1;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_011191762.1;transl_table=11 NC_010634.1 RefSeq gene 877170 877514 . + . ID=gene800;Name=YPTS_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04015;old_locus_tag=YPTS_0777 NC_010634.1 Protein Homology CDS 877170 877514 . + 0 ID=cds766;Parent=gene800;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NC_010634.1 RefSeq gene 877799 878413 . - . ID=gene801;Name=YPTS_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04020;old_locus_tag=YPTS_0778 NC_010634.1 Protein Homology CDS 877799 878413 . - 0 ID=cds767;Parent=gene801;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11 NC_010634.1 RefSeq gene 878413 879255 . - . ID=gene802;Name=YPTS_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04025;old_locus_tag=YPTS_0779 NC_010634.1 Protein Homology CDS 878413 879255 . - 0 ID=cds768;Parent=gene802;Dbxref=Genbank:WP_011191763.1;Name=WP_011191763.1;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_011191763.1;transl_table=11 NC_010634.1 RefSeq gene 879255 879956 . - . ID=gene803;Name=YPTS_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04030;old_locus_tag=YPTS_0780 NC_010634.1 Protein Homology CDS 879255 879956 . - 0 ID=cds769;Parent=gene803;Dbxref=Genbank:WP_011191764.1;Name=WP_011191764.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_011191764.1;transl_table=11 NC_010634.1 RefSeq gene 880250 881770 . + . ID=gene804;Name=YPTS_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04035;old_locus_tag=YPTS_0781 NC_010634.1 Protein Homology CDS 880250 881770 . + 0 ID=cds770;Parent=gene804;Dbxref=Genbank:WP_011191765.1;Name=WP_011191765.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_011191765.1;transl_table=11 NC_010634.1 RefSeq gene 881968 883413 . + . ID=gene805;Name=YPTS_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04040;old_locus_tag=YPTS_0782 NC_010634.1 Protein Homology CDS 881968 883413 . + 0 ID=cds771;Parent=gene805;Dbxref=Genbank:WP_011191766.1;Name=WP_011191766.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_011191766.1;transl_table=11 NC_010634.1 RefSeq gene 883572 886346 . - . ID=gene806;Name=YPTS_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04045;old_locus_tag=YPTS_0783 NC_010634.1 Protein Homology CDS 883572 886346 . - 0 ID=cds772;Parent=gene806;Dbxref=Genbank:WP_012413486.1;Name=WP_012413486.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_012413486.1;transl_table=11 NC_010634.1 RefSeq gene 886790 889024 . + . ID=gene807;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YPTS_RS04050;old_locus_tag=YPTS_0785 NC_010634.1 Protein Homology CDS 886790 889024 . + 0 ID=cds773;Parent=gene807;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11 NC_010634.1 RefSeq gene 889074 889238 . + . ID=gene808;Name=YPTS_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04055 NC_010634.1 Protein Homology CDS 889074 889238 . + 0 ID=cds774;Parent=gene808;Dbxref=Genbank:WP_011191768.1;Name=WP_011191768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191768.1;transl_table=11 NC_010634.1 RefSeq gene 889245 890087 . + . ID=gene809;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YPTS_RS04060;old_locus_tag=YPTS_0786 NC_010634.1 Protein Homology CDS 889245 890087 . + 0 ID=cds775;Parent=gene809;Dbxref=Genbank:WP_011191769.1;Name=WP_011191769.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_011191769.1;transl_table=11 NC_010634.1 RefSeq gene 890299 891936 . + . ID=gene810;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YPTS_RS04065;old_locus_tag=YPTS_0787 NC_010634.1 Protein Homology CDS 890299 891936 . + 0 ID=cds776;Parent=gene810;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11 NC_010634.1 RefSeq gene 892017 893312 . + . ID=gene811;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YPTS_RS04070;old_locus_tag=YPTS_0788 NC_010634.1 Protein Homology CDS 892017 893312 . + 0 ID=cds777;Parent=gene811;Dbxref=Genbank:WP_011191770.1;Name=WP_011191770.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_011191770.1;transl_table=11 NC_010634.1 RefSeq gene 893688 894257 . + . ID=gene812;Name=YPTS_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04075;old_locus_tag=YPTS_0789 NC_010634.1 Protein Homology CDS 893688 894257 . + 0 ID=cds778;Parent=gene812;Dbxref=Genbank:WP_011191771.1;Name=WP_011191771.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_011191771.1;transl_table=11 NC_010634.1 RefSeq gene 894361 895032 . + . ID=gene813;Name=YPTS_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04080;old_locus_tag=YPTS_0790 NC_010634.1 Protein Homology CDS 894361 895032 . + 0 ID=cds779;Parent=gene813;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11 NC_010634.1 RefSeq gene 895109 895468 . - . ID=gene814;Name=YPTS_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04085;old_locus_tag=YPTS_0791 NC_010634.1 Protein Homology CDS 895109 895468 . - 0 ID=cds780;Parent=gene814;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11 NC_010634.1 RefSeq gene 895861 897717 . + . ID=gene815;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YPTS_RS04090;old_locus_tag=YPTS_0792 NC_010634.1 Protein Homology CDS 895861 897717 . + 0 ID=cds781;Parent=gene815;Dbxref=Genbank:WP_011191772.1;Name=WP_011191772.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_011191772.1;transl_table=11 NC_010634.1 RefSeq gene 897717 899447 . + . ID=gene816;Name=YPTS_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04095;old_locus_tag=YPTS_0793 NC_010634.1 Protein Homology CDS 897717 899447 . + 0 ID=cds782;Parent=gene816;Dbxref=Genbank:WP_011191773.1;Name=WP_011191773.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_011191773.1;transl_table=11 NC_010634.1 RefSeq gene 899444 900178 . + . ID=gene817;Name=YPTS_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04100;old_locus_tag=YPTS_0794 NC_010634.1 Protein Homology CDS 899444 900178 . + 0 ID=cds783;Parent=gene817;Dbxref=Genbank:WP_011191774.1;Name=WP_011191774.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_011191774.1;transl_table=11 NC_010634.1 RefSeq repeat_region 900214 900393 . + . ID=id72;gbkey=repeat_region NC_010634.1 RefSeq gene 900421 900828 . - . ID=gene818;Name=YPTS_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04105;old_locus_tag=YPTS_0795 NC_010634.1 Protein Homology CDS 900421 900828 . - 0 ID=cds784;Parent=gene818;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11 NC_010634.1 RefSeq gene 901003 901203 . - . ID=gene819;Name=YPTS_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04110;old_locus_tag=YPTS_0796 NC_010634.1 Protein Homology CDS 901003 901203 . - 0 ID=cds785;Parent=gene819;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11 NC_010634.1 RefSeq gene 901296 901493 . + . ID=gene820;Name=YPTS_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04115 NC_010634.1 Protein Homology CDS 901296 901493 . + 0 ID=cds786;Parent=gene820;Dbxref=Genbank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;product=membrane protein;protein_id=WP_002222261.1;transl_table=11 NC_010634.1 RefSeq gene 901816 903234 . + . ID=gene821;Name=YPTS_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04120;old_locus_tag=YPTS_0798 NC_010634.1 Protein Homology CDS 901816 903234 . + 0 ID=cds787;Parent=gene821;Dbxref=Genbank:WP_012413487.1;Name=WP_012413487.1;gbkey=CDS;product=sirohydrochlorin ferrochelatase;protein_id=WP_012413487.1;transl_table=11 NC_010634.1 RefSeq gene 903245 904153 . + . ID=gene822;Name=YPTS_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04125;old_locus_tag=YPTS_0799 NC_010634.1 Protein Homology CDS 903245 904153 . + 0 ID=cds788;Parent=gene822;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11 NC_010634.1 RefSeq gene 904246 905682 . + . ID=gene823;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YPTS_RS04130;old_locus_tag=YPTS_0800 NC_010634.1 Protein Homology CDS 904246 905682 . + 0 ID=cds789;Parent=gene823;Dbxref=Genbank:WP_032467076.1;Name=WP_032467076.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_032467076.1;transl_table=11 NC_010634.1 RefSeq gene 905684 906325 . + . ID=gene824;Name=YPTS_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04135;old_locus_tag=YPTS_0801 NC_010634.1 Protein Homology CDS 905684 906325 . + 0 ID=cds790;Parent=gene824;Dbxref=Genbank:WP_002209388.1;Name=WP_002209388.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NC_010634.1 RefSeq gene 906516 906833 . + . ID=gene825;Name=YPTS_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04140;old_locus_tag=YPTS_0802 NC_010634.1 Protein Homology CDS 906516 906833 . + 0 ID=cds791;Parent=gene825;Dbxref=Genbank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209389.1;transl_table=11 NC_010634.1 RefSeq gene 907146 907466 . + . ID=gene826;Name=YPTS_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04145;old_locus_tag=YPTS_0803 NC_010634.1 Protein Homology CDS 907146 907466 . + 0 ID=cds792;Parent=gene826;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NC_010634.1 RefSeq gene 907470 908195 . + . ID=gene827;Name=YPTS_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04150;old_locus_tag=YPTS_0804 NC_010634.1 Protein Homology CDS 907470 908195 . + 0 ID=cds793;Parent=gene827;Dbxref=Genbank:WP_012105643.1;Name=WP_012105643.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_012105643.1;transl_table=11 NC_010634.1 RefSeq gene 908334 908822 . + . ID=gene828;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YPTS_RS04155;old_locus_tag=YPTS_0805 NC_010634.1 Protein Homology CDS 908334 908822 . + 0 ID=cds794;Parent=gene828;Dbxref=Genbank:WP_012413489.1;Name=WP_012413489.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_012413489.1;transl_table=11 NC_010634.1 RefSeq gene 908833 909882 . + . ID=gene829;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=YPTS_RS04160;old_locus_tag=YPTS_0806 NC_010634.1 Protein Homology CDS 908833 909882 . + 0 ID=cds795;Parent=gene829;Dbxref=Genbank:WP_012413490.1;Name=WP_012413490.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_012413490.1;transl_table=11 NC_010634.1 RefSeq gene 909860 910624 . + . ID=gene830;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YPTS_RS04165;old_locus_tag=YPTS_0807 NC_010634.1 Protein Homology CDS 909860 910624 . + 0 ID=cds796;Parent=gene830;Dbxref=Genbank:WP_011191778.1;Name=WP_011191778.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_011191778.1;transl_table=11 NC_010634.1 RefSeq gene 910618 911244 . + . ID=gene831;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YPTS_RS04170;old_locus_tag=YPTS_0808 NC_010634.1 Protein Homology CDS 910618 911244 . + 0 ID=cds797;Parent=gene831;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NC_010634.1 RefSeq gene 911366 912349 . + . ID=gene832;Name=YPTS_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04175;old_locus_tag=YPTS_0809 NC_010634.1 Protein Homology CDS 911366 912349 . + 0 ID=cds798;Parent=gene832;Dbxref=Genbank:WP_012304557.1;Name=WP_012304557.1;gbkey=CDS;product=lipoprotein NlpD;protein_id=WP_012304557.1;transl_table=11 NC_010634.1 RefSeq gene 912404 913402 . + . ID=gene833;Name=YPTS_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04180;old_locus_tag=YPTS_0810 NC_010634.1 Protein Homology CDS 912404 913402 . + 0 ID=cds799;Parent=gene833;Dbxref=Genbank:WP_011191780.1;Name=WP_011191780.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_011191780.1;transl_table=11 NC_010634.1 RefSeq gene 913775 916330 . - . ID=gene834;Name=YPTS_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04185;old_locus_tag=YPTS_0811 NC_010634.1 Protein Homology CDS 913775 916330 . - 0 ID=cds800;Parent=gene834;Dbxref=Genbank:WP_011191781.1;Name=WP_011191781.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_011191781.1;transl_table=11 NC_010634.1 RefSeq gene 916903 917037 . + . ID=gene835;Name=YPTS_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04190;old_locus_tag=YPTS_0812 NC_010634.1 Protein Homology CDS 916903 917037 . + 0 ID=cds801;Parent=gene835;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11 NC_010634.1 RefSeq gene 917211 917666 . - . ID=gene836;Name=YPTS_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04195;old_locus_tag=YPTS_0813 NC_010634.1 Protein Homology CDS 917211 917666 . - 0 ID=cds802;Parent=gene836;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11 NC_010634.1 RefSeq gene 918149 919264 . + . ID=gene837;Name=YPTS_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04200;old_locus_tag=YPTS_0814 NC_010634.1 Protein Homology CDS 918149 919264 . + 0 ID=cds803;Parent=gene837;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NC_010634.1 RefSeq gene 919328 920098 . + . ID=gene838;Name=YPTS_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04205;old_locus_tag=YPTS_0815 NC_010634.1 Protein Homology CDS 919328 920098 . + 0 ID=cds804;Parent=gene838;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11 NC_010634.1 RefSeq gene 920185 921186 . + . ID=gene839;Name=YPTS_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04210;old_locus_tag=YPTS_0816 NC_010634.1 Protein Homology CDS 920185 921186 . + 0 ID=cds805;Parent=gene839;Dbxref=Genbank:WP_002228229.1;Name=WP_002228229.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002228229.1;transl_table=11 NC_010634.1 RefSeq gene 921193 921867 . + . ID=gene840;Name=YPTS_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04215;old_locus_tag=YPTS_0817 NC_010634.1 Protein Homology CDS 921193 921867 . + 0 ID=cds806;Parent=gene840;Dbxref=Genbank:WP_011191782.1;Name=WP_011191782.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_011191782.1;transl_table=11 NC_010634.1 RefSeq gene 921988 922959 . - . ID=gene841;Name=YPTS_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04220;old_locus_tag=YPTS_0818 NC_010634.1 Protein Homology CDS 921988 922959 . - 0 ID=cds807;Parent=gene841;Dbxref=Genbank:WP_002209407.1;Name=WP_002209407.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NC_010634.1 RefSeq gene 923514 924803 . - . ID=gene842;Name=YPTS_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04225;old_locus_tag=YPTS_0819 NC_010634.1 Protein Homology CDS 923514 924803 . - 0 ID=cds808;Parent=gene842;Dbxref=Genbank:WP_012413492.1;Name=WP_012413492.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_012413492.1;transl_table=11 NC_010634.1 RefSeq gene 924888 925229 . - . ID=gene843;Name=YPTS_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04230;old_locus_tag=YPTS_0820 NC_010634.1 Protein Homology CDS 924888 925229 . - 0 ID=cds809;Parent=gene843;Dbxref=Genbank:WP_002209409.1;Name=WP_002209409.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_002209409.1;transl_table=11 NC_010634.1 RefSeq gene 925493 925756 . - . ID=gene844;Name=YPTS_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04235;old_locus_tag=YPTS_0821 NC_010634.1 Protein Homology CDS 925493 925756 . - 0 ID=cds810;Parent=gene844;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11 NC_010634.1 RefSeq gene 925967 926170 . - . ID=gene845;Name=YPTS_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04240;old_locus_tag=YPTS_0822 NC_010634.1 Protein Homology CDS 925967 926170 . - 0 ID=cds811;Parent=gene845;Dbxref=Genbank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NC_010634.1 RefSeq gene 926594 927358 . - . ID=gene846;Name=YPTS_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04245;old_locus_tag=YPTS_0823 NC_010634.1 Protein Homology CDS 926594 927358 . - 0 ID=cds812;Parent=gene846;Dbxref=Genbank:WP_012413493.1;Name=WP_012413493.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_012413493.1;transl_table=11 NC_010634.1 RefSeq gene 927429 928808 . - . ID=gene847;Name=YPTS_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04250;old_locus_tag=YPTS_0824 NC_010634.1 Protein Homology CDS 927429 928808 . - 0 ID=cds813;Parent=gene847;Dbxref=Genbank:WP_011191786.1;Name=WP_011191786.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_011191786.1;transl_table=11 NC_010634.1 RefSeq gene 929045 929295 . - . ID=gene848;Name=YPTS_RS04255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS04255;old_locus_tag=YPTS_0826;pseudo=true NC_010634.1 Protein Homology CDS 929045 929295 . - 0 ID=cds814;Parent=gene848;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 929467 931563 . + . ID=gene849;Name=YPTS_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04260;old_locus_tag=YPTS_0827 NC_010634.1 Protein Homology CDS 929467 931563 . + 0 ID=cds815;Parent=gene849;Dbxref=Genbank:WP_002223222.1;Name=WP_002223222.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002223222.1;transl_table=11 NC_010634.1 RefSeq gene 932005 933192 . + . ID=gene850;Name=YPTS_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04265;old_locus_tag=YPTS_0828 NC_010634.1 Protein Homology CDS 932005 933192 . + 0 ID=cds816;Parent=gene850;Dbxref=Genbank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002209414.1;transl_table=11 NC_010634.1 RefSeq gene 933355 933522 . + . ID=gene851;Name=YPTS_RS04270;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS04270 NC_010634.1 RefSeq gene 933532 934317 . - . ID=gene852;Name=YPTS_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04275;old_locus_tag=YPTS_0829 NC_010634.1 Protein Homology CDS 933532 934317 . - 0 ID=cds817;Parent=gene852;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11 NC_010634.1 RefSeq gene 934314 934565 . - . ID=gene853;Name=YPTS_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04280;old_locus_tag=YPTS_0830 NC_010634.1 Protein Homology CDS 934314 934565 . - 0 ID=cds818;Parent=gene853;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11 NC_010634.1 RefSeq gene 934748 936391 . - . ID=gene854;Name=YPTS_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04285;old_locus_tag=YPTS_0831 NC_010634.1 Protein Homology CDS 934748 936391 . - 0 ID=cds819;Parent=gene854;Dbxref=Genbank:WP_002209418.1;Name=WP_002209418.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_002209418.1;transl_table=11 NC_010634.1 RefSeq gene 936805 938301 . - . ID=gene855;Name=YPTS_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04290;old_locus_tag=YPTS_0832 NC_010634.1 Protein Homology CDS 936805 938301 . - 0 ID=cds820;Parent=gene855;Dbxref=Genbank:WP_012413495.1;Name=WP_012413495.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_012413495.1;transl_table=11 NC_010634.1 RefSeq gene 938312 939193 . - . ID=gene856;Name=YPTS_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04295;old_locus_tag=YPTS_0833 NC_010634.1 Protein Homology CDS 938312 939193 . - 0 ID=cds821;Parent=gene856;Dbxref=Genbank:WP_012413496.1;Name=WP_012413496.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_012413496.1;transl_table=11 NC_010634.1 RefSeq gene 939277 940314 . - . ID=gene857;Name=YPTS_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04300;old_locus_tag=YPTS_0834 NC_010634.1 Protein Homology CDS 939277 940314 . - 0 ID=cds822;Parent=gene857;Dbxref=Genbank:WP_002216010.1;Name=WP_002216010.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002216010.1;transl_table=11 NC_010634.1 RefSeq gene 940327 941316 . - . ID=gene858;Name=YPTS_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04305;old_locus_tag=YPTS_0835 NC_010634.1 Protein Homology CDS 940327 941316 . - 0 ID=cds823;Parent=gene858;Dbxref=Genbank:WP_002209421.1;Name=WP_002209421.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209421.1;transl_table=11 NC_010634.1 RefSeq gene 941309 942823 . - . ID=gene859;Name=YPTS_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04310;old_locus_tag=YPTS_0836 NC_010634.1 Protein Homology CDS 941309 942823 . - 0 ID=cds824;Parent=gene859;Dbxref=Genbank:WP_012105632.1;Name=WP_012105632.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105632.1;transl_table=11 NC_010634.1 RefSeq gene 942972 943976 . - . ID=gene860;Name=YPTS_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04315;old_locus_tag=YPTS_0837 NC_010634.1 Protein Homology CDS 942972 943976 . - 0 ID=cds825;Parent=gene860;Dbxref=Genbank:WP_041175560.1;Name=WP_041175560.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_041175560.1;transl_table=11 NC_010634.1 RefSeq gene 944137 944946 . - . ID=gene861;Name=YPTS_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04320;old_locus_tag=YPTS_0838 NC_010634.1 Protein Homology CDS 944137 944946 . - 0 ID=cds826;Parent=gene861;Dbxref=Genbank:WP_011191793.1;Name=WP_011191793.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_011191793.1;transl_table=11 NC_010634.1 RefSeq gene 945667 946362 . + . ID=gene862;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPTS_RS04325;old_locus_tag=YPTS_0839 NC_010634.1 Protein Homology CDS 945667 946362 . + 0 ID=cds827;Parent=gene862;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NC_010634.1 RefSeq gene 946812 949262 . + . ID=gene863;Name=YPTS_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04330;old_locus_tag=YPTS_0840 NC_010634.1 Protein Homology CDS 946812 949262 . + 0 ID=cds828;Parent=gene863;Dbxref=Genbank:WP_012413498.1;Name=WP_012413498.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_012413498.1;transl_table=11 NC_010634.1 RefSeq gene 949274 949891 . + . ID=gene864;Name=YPTS_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04335;old_locus_tag=YPTS_0841 NC_010634.1 Protein Homology CDS 949274 949891 . + 0 ID=cds829;Parent=gene864;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11 NC_010634.1 RefSeq gene 949893 950753 . + . ID=gene865;Name=YPTS_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04340;old_locus_tag=YPTS_0842 NC_010634.1 Protein Homology CDS 949893 950753 . + 0 ID=cds830;Parent=gene865;Dbxref=Genbank:WP_002209429.1;Name=WP_002209429.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_002209429.1;transl_table=11 NC_010634.1 RefSeq gene 950899 951609 . + . ID=gene866;Name=YPTS_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04345;old_locus_tag=YPTS_0843 NC_010634.1 Protein Homology CDS 950899 951609 . + 0 ID=cds831;Parent=gene866;Dbxref=Genbank:WP_011191797.1;Name=WP_011191797.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_011191797.1;transl_table=11 NC_010634.1 RefSeq gene 951867 952397 . - . ID=gene867;Name=YPTS_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04350;old_locus_tag=YPTS_0844 NC_010634.1 Protein Homology CDS 951867 952397 . - 0 ID=cds832;Parent=gene867;Dbxref=Genbank:WP_012413499.1;Name=WP_012413499.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome B561;protein_id=WP_012413499.1;transl_table=11 NC_010634.1 RefSeq gene 952545 952928 . - . ID=gene868;Name=YPTS_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04355;old_locus_tag=YPTS_0845 NC_010634.1 Protein Homology CDS 952545 952928 . - 0 ID=cds833;Parent=gene868;Dbxref=Genbank:WP_011191799.1;Name=WP_011191799.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_011191799.1;transl_table=11 NC_010634.1 RefSeq gene 953004 955217 . - . ID=gene869;Name=YPTS_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04360;old_locus_tag=YPTS_0846 NC_010634.1 Protein Homology CDS 953004 955217 . - 0 ID=cds834;Parent=gene869;Dbxref=Genbank:WP_002209433.1;Name=WP_002209433.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_002209433.1;transl_table=11 NC_010634.1 RefSeq gene 955753 956694 . + . ID=gene870;Name=YPTS_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04365;old_locus_tag=YPTS_0847 NC_010634.1 Protein Homology CDS 955753 956694 . + 0 ID=cds835;Parent=gene870;Dbxref=Genbank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11 NC_010634.1 RefSeq gene 956787 957404 . + . ID=gene871;Name=YPTS_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04370;old_locus_tag=YPTS_0848 NC_010634.1 Protein Homology CDS 956787 957404 . + 0 ID=cds836;Parent=gene871;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11 NC_010634.1 RefSeq gene 957404 958927 . + . ID=gene872;Name=YPTS_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04375;old_locus_tag=YPTS_0849 NC_010634.1 Protein Homology CDS 957404 958927 . + 0 ID=cds837;Parent=gene872;Dbxref=Genbank:WP_012304546.1;Name=WP_012304546.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012304546.1;transl_table=11 NC_010634.1 RefSeq gene 958927 960051 . + . ID=gene873;Name=YPTS_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04380;old_locus_tag=YPTS_0850 NC_010634.1 Protein Homology CDS 958927 960051 . + 0 ID=cds838;Parent=gene873;Dbxref=Genbank:WP_041175439.1;Name=WP_041175439.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_041175439.1;transl_table=11 NC_010634.1 RefSeq gene 960275 961105 . + . ID=gene874;Name=YPTS_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04385;old_locus_tag=YPTS_0851 NC_010634.1 Protein Homology CDS 960275 961105 . + 0 ID=cds839;Parent=gene874;Dbxref=Genbank:WP_002209438.1;Name=WP_002209438.1;gbkey=CDS;product=transketolase;protein_id=WP_002209438.1;transl_table=11 NC_010634.1 RefSeq gene 961098 962042 . + . ID=gene875;Name=YPTS_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04390;old_locus_tag=YPTS_0852 NC_010634.1 Protein Homology CDS 961098 962042 . + 0 ID=cds840;Parent=gene875;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11 NC_010634.1 RefSeq gene 962045 963532 . + . ID=gene876;Name=YPTS_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04395;old_locus_tag=YPTS_0853 NC_010634.1 Protein Homology CDS 962045 963532 . + 0 ID=cds841;Parent=gene876;Dbxref=Genbank:WP_011191803.1;Name=WP_011191803.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_011191803.1;transl_table=11 NC_010634.1 RefSeq gene 963553 964977 . + . ID=gene877;Name=YPTS_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04400;old_locus_tag=YPTS_0854 NC_010634.1 Protein Homology CDS 963553 964977 . + 0 ID=cds842;Parent=gene877;Dbxref=Genbank:WP_011191804.1;Name=WP_011191804.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_011191804.1;transl_table=11 NC_010634.1 RefSeq gene 965199 966143 . - . ID=gene878;Name=YPTS_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04405;old_locus_tag=YPTS_0856 NC_010634.1 Protein Homology CDS 965199 966143 . - 0 ID=cds843;Parent=gene878;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NC_010634.1 RefSeq gene 966391 967731 . - . ID=gene879;Name=YPTS_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04410;old_locus_tag=YPTS_0857 NC_010634.1 Protein Homology CDS 966391 967731 . - 0 ID=cds844;Parent=gene879;Dbxref=Genbank:WP_011191805.1;Name=WP_011191805.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011191805.1;transl_table=11 NC_010634.1 RefSeq gene 968048 968536 . + . ID=gene880;Name=YPTS_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04415;old_locus_tag=YPTS_0858 NC_010634.1 Protein Homology CDS 968048 968536 . + 0 ID=cds845;Parent=gene880;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11 NC_010634.1 RefSeq gene 968651 969721 . + . ID=gene881;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YPTS_RS04420;old_locus_tag=YPTS_0859 NC_010634.1 Protein Homology CDS 968651 969721 . + 0 ID=cds846;Parent=gene881;Dbxref=Genbank:WP_011191806.1;Name=WP_011191806.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_011191806.1;transl_table=11 NC_010634.1 RefSeq repeat_region 969793 970597 . + . ID=id73;gbkey=repeat_region NC_010634.1 RefSeq gene 970600 971148 . + . ID=gene882;Name=YPTS_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04425;old_locus_tag=YPTS_0860 NC_010634.1 Protein Homology CDS 970600 971148 . + 0 ID=cds847;Parent=gene882;Dbxref=Genbank:WP_011191807.1;Name=WP_011191807.1;gbkey=CDS;product=regulatory protein RecX;protein_id=WP_011191807.1;transl_table=11 NC_010634.1 RefSeq gene 971288 973915 . + . ID=gene883;Name=YPTS_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04430;old_locus_tag=YPTS_0861 NC_010634.1 Protein Homology CDS 971288 973915 . + 0 ID=cds848;Parent=gene883;Dbxref=Genbank:WP_011191808.1;Name=WP_011191808.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_011191808.1;transl_table=11 NC_010634.1 RefSeq gene 974165 974350 . + . ID=gene884;Name=YPTS_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04435;old_locus_tag=YPTS_0862 NC_010634.1 Protein Homology CDS 974165 974350 . + 0 ID=cds849;Parent=gene884;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11 NC_010634.1 RefSeq gene 974713 974805 . + . ID=gene885;Name=YPTS_RS04440;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS04440;old_locus_tag=YPTS_R0021 NC_010634.1 tRNAscan-SE tRNA 974713 974805 . + . ID=rna33;Parent=gene885;anticodon=(pos:974747..974749);gbkey=tRNA;product=tRNA-Ser NC_010634.1 tRNAscan-SE exon 974713 974805 . + . ID=id74;Parent=rna33;anticodon=(pos:974747..974749);gbkey=tRNA;product=tRNA-Ser NC_010634.1 RefSeq gene 974814 974890 . + . ID=gene886;Name=YPTS_RS04445;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS04445;old_locus_tag=YPTS_R0022 NC_010634.1 tRNAscan-SE tRNA 974814 974890 . + . ID=rna34;Parent=gene886;anticodon=(pos:974848..974850);gbkey=tRNA;product=tRNA-Arg NC_010634.1 tRNAscan-SE exon 974814 974890 . + . ID=id75;Parent=rna34;anticodon=(pos:974848..974850);gbkey=tRNA;product=tRNA-Arg NC_010634.1 RefSeq repeat_region 974945 975318 . + . ID=id76;gbkey=repeat_region NC_010634.1 RefSeq gene 974948 975024 . + . ID=gene887;Name=YPTS_RS04450;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS04450;old_locus_tag=YPTS_R0023 NC_010634.1 tRNAscan-SE tRNA 974948 975024 . + . ID=rna35;Parent=gene887;anticodon=(pos:974982..974984);gbkey=tRNA;product=tRNA-Arg NC_010634.1 tRNAscan-SE exon 974948 975024 . + . ID=id77;Parent=rna35;anticodon=(pos:974982..974984);gbkey=tRNA;product=tRNA-Arg NC_010634.1 RefSeq gene 975104 975180 . + . ID=gene888;Name=YPTS_RS04455;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS04455;old_locus_tag=YPTS_R0024 NC_010634.1 tRNAscan-SE tRNA 975104 975180 . + . ID=rna36;Parent=gene888;anticodon=(pos:975138..975140);gbkey=tRNA;product=tRNA-Arg NC_010634.1 tRNAscan-SE exon 975104 975180 . + . ID=id78;Parent=rna36;anticodon=(pos:975138..975140);gbkey=tRNA;product=tRNA-Arg NC_010634.1 RefSeq gene 975650 976216 . + . ID=gene889;Name=YPTS_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04460;old_locus_tag=YPTS_0863 NC_010634.1 Protein Homology CDS 975650 976216 . + 0 ID=cds850;Parent=gene889;Dbxref=Genbank:WP_002209450.1;Name=WP_002209450.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NC_010634.1 RefSeq gene 976213 976641 . + . ID=gene890;Name=YPTS_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04465;old_locus_tag=YPTS_0864 NC_010634.1 Protein Homology CDS 976213 976641 . + 0 ID=cds851;Parent=gene890;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11 NC_010634.1 RefSeq gene 976724 978283 . + . ID=gene891;Name=YPTS_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04470;old_locus_tag=YPTS_0865 NC_010634.1 Protein Homology CDS 976724 978283 . + 0 ID=cds852;Parent=gene891;Dbxref=Genbank:WP_041175582.1;Name=WP_041175582.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_041175582.1;transl_table=11 NC_010634.1 RefSeq gene 978451 978966 . + . ID=gene892;Name=YPTS_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04475;old_locus_tag=YPTS_0866 NC_010634.1 Protein Homology CDS 978451 978966 . + 0 ID=cds853;Parent=gene892;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NC_010634.1 RefSeq gene 979055 980338 . - . ID=gene893;Name=YPTS_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04480;old_locus_tag=YPTS_0867 NC_010634.1 Protein Homology CDS 979055 980338 . - 0 ID=cds854;Parent=gene893;Dbxref=Genbank:WP_012413501.1;Name=WP_012413501.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413501.1;transl_table=11 NC_010634.1 RefSeq gene 980407 981198 . - . ID=gene894;Name=YPTS_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04485;old_locus_tag=YPTS_0868 NC_010634.1 Protein Homology CDS 980407 981198 . - 0 ID=cds855;Parent=gene894;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11 NC_010634.1 RefSeq gene 981364 982725 . + . ID=gene895;Name=YPTS_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04490;old_locus_tag=YPTS_0869 NC_010634.1 Protein Homology CDS 981364 982725 . + 0 ID=cds856;Parent=gene895;Dbxref=Genbank:WP_011191811.1;Name=WP_011191811.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_011191811.1;transl_table=11 NC_010634.1 RefSeq gene 982953 983201 . + . ID=gene896;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YPTS_RS04495;old_locus_tag=YPTS_0870 NC_010634.1 Protein Homology CDS 982953 983201 . + 0 ID=cds857;Parent=gene896;Dbxref=Genbank:WP_002209458.1;Name=WP_002209458.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NC_010634.1 RefSeq gene 983223 983771 . + . ID=gene897;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YPTS_RS04500;old_locus_tag=YPTS_0871 NC_010634.1 Protein Homology CDS 983223 983771 . + 0 ID=cds858;Parent=gene897;Dbxref=Genbank:WP_011191812.1;Name=WP_011191812.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_011191812.1;transl_table=11 NC_010634.1 RefSeq gene 983810 984550 . + . ID=gene898;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YPTS_RS04505;old_locus_tag=YPTS_0872 NC_010634.1 Protein Homology CDS 983810 984550 . + 0 ID=cds859;Parent=gene898;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11 NC_010634.1 RefSeq gene 984631 984978 . + . ID=gene899;Name=YPTS_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04510;old_locus_tag=YPTS_0873 NC_010634.1 Protein Homology CDS 984631 984978 . + 0 ID=cds860;Parent=gene899;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NC_010634.1 RefSeq gene 985241 986008 . - . ID=gene900;Name=YPTS_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04515;old_locus_tag=YPTS_0874 NC_010634.1 Protein Homology CDS 985241 986008 . - 0 ID=cds861;Parent=gene900;Dbxref=Genbank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209462.1;transl_table=11 NC_010634.1 RefSeq gene 986331 987674 . - . ID=gene901;Name=YPTS_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04520;old_locus_tag=YPTS_0875 NC_010634.1 Protein Homology CDS 986331 987674 . - 0 ID=cds862;Parent=gene901;Dbxref=Genbank:WP_012105614.1;Name=WP_012105614.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_012105614.1;transl_table=11 NC_010634.1 RefSeq gene 988107 988823 . - . ID=gene902;Name=YPTS_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04525;old_locus_tag=YPTS_0876 NC_010634.1 Protein Homology CDS 988107 988823 . - 0 ID=cds863;Parent=gene902;Dbxref=Genbank:WP_002223245.1;Name=WP_002223245.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002223245.1;transl_table=11 NC_010634.1 RefSeq gene 989055 990125 . + . ID=gene903;Name=YPTS_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04530;old_locus_tag=YPTS_0877 NC_010634.1 Protein Homology CDS 989055 990125 . + 0 ID=cds864;Parent=gene903;Dbxref=Genbank:WP_032467141.1;Name=WP_032467141.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_032467141.1;transl_table=11 NC_010634.1 RefSeq gene 990138 991259 . + . ID=gene904;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YPTS_RS04535;old_locus_tag=YPTS_0878 NC_010634.1 Protein Homology CDS 990138 991259 . + 0 ID=cds865;Parent=gene904;Dbxref=Genbank:WP_002209465.1;Name=WP_002209465.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_002209465.1;transl_table=11 NC_010634.1 RefSeq repeat_region 991356 993309 . + . ID=id79;gbkey=repeat_region NC_010634.1 RefSeq gene 991422 992201 . - . ID=gene905;Name=YPTS_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04540;old_locus_tag=YPTS_0879 NC_010634.1 Protein Homology CDS 991422 992201 . - 0 ID=cds866;Parent=gene905;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_010634.1 RefSeq gene 992201 993223 . - . ID=gene906;Name=YPTS_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04545;old_locus_tag=YPTS_0880 NC_010634.1 Protein Homology CDS 992201 993223 . - 0 ID=cds867;Parent=gene906;Dbxref=Genbank:WP_012413427.1;Name=WP_012413427.1;gbkey=CDS;product=transposase;protein_id=WP_012413427.1;transl_table=11 NC_010634.1 RefSeq gene 993323 994480 . - . ID=gene907;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=YPTS_RS04550;old_locus_tag=YPTS_0881 NC_010634.1 Protein Homology CDS 993323 994480 . - 0 ID=cds868;Parent=gene907;Dbxref=Genbank:WP_002228330.1;Name=WP_002228330.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_002228330.1;transl_table=11 NC_010634.1 RefSeq gene 994842 995204 . - . ID=gene908;Name=YPTS_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04555;old_locus_tag=YPTS_0883 NC_010634.1 Protein Homology CDS 994842 995204 . - 0 ID=cds869;Parent=gene908;Dbxref=Genbank:WP_012413503.1;Name=WP_012413503.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_012413503.1;transl_table=11 NC_010634.1 RefSeq gene 995559 996290 . - . ID=gene909;Name=YPTS_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04560;old_locus_tag=YPTS_0884 NC_010634.1 Protein Homology CDS 995559 996290 . - 0 ID=cds870;Parent=gene909;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11 NC_010634.1 RefSeq gene 996426 997403 . + . ID=gene910;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YPTS_RS04565;old_locus_tag=YPTS_0885 NC_010634.1 Protein Homology CDS 996426 997403 . + 0 ID=cds871;Parent=gene910;Dbxref=Genbank:WP_002231132.1;Name=WP_002231132.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridine synthase D;protein_id=WP_002231132.1;transl_table=11 NC_010634.1 RefSeq gene 997405 998136 . + . ID=gene911;Name=YPTS_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04570;old_locus_tag=YPTS_0886 NC_010634.1 Protein Homology CDS 997405 998136 . + 0 ID=cds872;Parent=gene911;Dbxref=Genbank:WP_011191814.1;Name=WP_011191814.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191814.1;transl_table=11 NC_010634.1 RefSeq gene 998266 1000839 . + . ID=gene912;Name=YPTS_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04575;old_locus_tag=YPTS_0887 NC_010634.1 Protein Homology CDS 998266 1000839 . + 0 ID=cds873;Parent=gene912;Dbxref=Genbank:WP_002217405.1;Name=WP_002217405.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_002217405.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1000921 1006697 . + . ID=id80;gbkey=repeat_region NC_010634.1 RefSeq gene 1001353 1002901 . + . ID=gene913;Name=YPTS_RS04585;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS04585;old_locus_tag=YPTS_R0087 NC_010634.1 RefSeq rRNA 1001353 1002901 . + . ID=rna37;Parent=gene913;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq exon 1001353 1002901 . + . ID=id81;Parent=rna37;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq gene 1003001 1003077 . + . ID=gene914;Name=YPTS_RS04590;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS04590;old_locus_tag=YPTS_R0026 NC_010634.1 tRNAscan-SE tRNA 1003001 1003077 . + . ID=rna38;Parent=gene914;anticodon=(pos:1003035..1003037);gbkey=tRNA;product=tRNA-Ile NC_010634.1 tRNAscan-SE exon 1003001 1003077 . + . ID=id82;Parent=rna38;anticodon=(pos:1003035..1003037);gbkey=tRNA;product=tRNA-Ile NC_010634.1 RefSeq gene 1003129 1003204 . + . ID=gene915;Name=YPTS_RS04595;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS04595;old_locus_tag=YPTS_R0027 NC_010634.1 tRNAscan-SE tRNA 1003129 1003204 . + . ID=rna39;Parent=gene915;anticodon=(pos:1003162..1003164);gbkey=tRNA;product=tRNA-Ala NC_010634.1 tRNAscan-SE exon 1003129 1003204 . + . ID=id83;Parent=rna39;anticodon=(pos:1003162..1003164);gbkey=tRNA;product=tRNA-Ala NC_010634.1 RefSeq gene 1003414 1006347 . + . ID=gene916;Name=YPTS_RS04600;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS04600;old_locus_tag=YPTS_R0094 NC_010634.1 RefSeq rRNA 1003414 1006347 . + . ID=rna40;Parent=gene916;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq exon 1003414 1006347 . + . ID=id84;Parent=rna40;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq gene 1006440 1006555 . + . ID=gene917;Name=YPTS_RS04605;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS04605;old_locus_tag=YPTS_R0101 NC_010634.1 cmsearch rRNA 1006440 1006555 . + . ID=rna41;Parent=gene917;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 1006440 1006555 . + . ID=id85;Parent=rna41;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 1006643 1006900 . + . ID=gene918;Name=YPTS_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04610 NC_010634.1 Protein Homology CDS 1006643 1006900 . + 0 ID=cds874;Parent=gene918;Dbxref=Genbank:WP_041175440.1;Name=WP_041175440.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175440.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1006770 1006884 . + . ID=id86;gbkey=repeat_region NC_010634.1 RefSeq gene 1007009 1007350 . - . ID=gene919;Name=YPTS_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04615;old_locus_tag=YPTS_0891 NC_010634.1 Protein Homology CDS 1007009 1007350 . - 0 ID=cds875;Parent=gene919;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11 NC_010634.1 RefSeq gene 1007412 1008767 . - . ID=gene920;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YPTS_RS04620;old_locus_tag=YPTS_0892 NC_010634.1 Protein Homology CDS 1007412 1008767 . - 0 ID=cds876;Parent=gene920;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11 NC_010634.1 RefSeq gene 1008943 1011585 . - . ID=gene921;Name=YPTS_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04625;old_locus_tag=YPTS_0893 NC_010634.1 Protein Homology CDS 1008943 1011585 . - 0 ID=cds877;Parent=gene921;Dbxref=Genbank:WP_012304535.1;Name=WP_012304535.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=protein lysine acetyltransferase;protein_id=WP_012304535.1;transl_table=11 NC_010634.1 RefSeq gene 1011628 1012377 . - . ID=gene922;Name=YPTS_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04630;old_locus_tag=YPTS_0894 NC_010634.1 Protein Homology CDS 1011628 1012377 . - 0 ID=cds878;Parent=gene922;Dbxref=Genbank:WP_002208749.1;Name=WP_002208749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208749.1;transl_table=11 NC_010634.1 RefSeq gene 1012547 1012984 . - . ID=gene923;Name=YPTS_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04635;old_locus_tag=YPTS_0895 NC_010634.1 Protein Homology CDS 1012547 1012984 . - 0 ID=cds879;Parent=gene923;Dbxref=Genbank:WP_002216643.1;Name=WP_002216643.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002216643.1;transl_table=11 NC_010634.1 RefSeq gene 1013236 1014402 . + . ID=gene924;Name=YPTS_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04640;old_locus_tag=YPTS_0896 NC_010634.1 Protein Homology CDS 1013236 1014402 . + 0 ID=cds880;Parent=gene924;Dbxref=Genbank:WP_002208747.1;Name=WP_002208747.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208747.1;transl_table=11 NC_010634.1 RefSeq gene 1014535 1016070 . - . ID=gene925;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YPTS_RS04645;old_locus_tag=YPTS_0897 NC_010634.1 Protein Homology CDS 1014535 1016070 . - 0 ID=cds881;Parent=gene925;Dbxref=Genbank:WP_002208746.1;Name=WP_002208746.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NC_010634.1 RefSeq gene 1016109 1017281 . - . ID=gene926;Name=YPTS_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04650;old_locus_tag=YPTS_0898 NC_010634.1 Protein Homology CDS 1016109 1017281 . - 0 ID=cds882;Parent=gene926;Dbxref=Genbank:WP_002208745.1;Name=WP_002208745.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein A;protein_id=WP_002208745.1;transl_table=11 NC_010634.1 RefSeq gene 1017665 1018177 . - . ID=gene927;Name=YPTS_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04655;old_locus_tag=YPTS_0899 NC_010634.1 Protein Homology CDS 1017665 1018177 . - 0 ID=cds883;Parent=gene927;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11 NC_010634.1 RefSeq gene 1018349 1018690 . - . ID=gene928;Name=YPTS_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04660;old_locus_tag=YPTS_0900 NC_010634.1 Protein Homology CDS 1018349 1018690 . - 0 ID=cds884;Parent=gene928;Dbxref=Genbank:WP_011191819.1;Name=WP_011191819.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011191819.1;transl_table=11 NC_010634.1 RefSeq gene 1018687 1019460 . - . ID=gene929;Name=YPTS_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04665;old_locus_tag=YPTS_0901 NC_010634.1 Protein Homology CDS 1018687 1019460 . - 0 ID=cds885;Parent=gene929;Dbxref=Genbank:WP_011191820.1;Name=WP_011191820.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191820.1;transl_table=11 NC_010634.1 RefSeq gene 1019620 1020819 . - . ID=gene930;Name=YPTS_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04670;old_locus_tag=YPTS_0902 NC_010634.1 Protein Homology CDS 1019620 1020819 . - 0 ID=cds886;Parent=gene930;Dbxref=Genbank:WP_011191821.1;Name=WP_011191821.1;gbkey=CDS;product=transporter;protein_id=WP_011191821.1;transl_table=11 NC_010634.1 RefSeq gene 1021028 1021414 . - . ID=gene931;Name=YPTS_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04675;old_locus_tag=YPTS_0903 NC_010634.1 Protein Homology CDS 1021028 1021414 . - 0 ID=cds887;Parent=gene931;Dbxref=Genbank:WP_041175441.1;Name=WP_041175441.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175441.1;transl_table=11 NC_010634.1 RefSeq gene 1021524 1022921 . - . ID=gene932;Name=YPTS_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04680;old_locus_tag=YPTS_0904 NC_010634.1 Protein Homology CDS 1021524 1022921 . - 0 ID=cds888;Parent=gene932;Dbxref=Genbank:WP_011191823.1;Name=WP_011191823.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_011191823.1;transl_table=11 NC_010634.1 RefSeq gene 1022918 1023121 . - . ID=gene933;Name=YPTS_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04685;old_locus_tag=YPTS_0905 NC_010634.1 Protein Homology CDS 1022918 1023121 . - 0 ID=cds889;Parent=gene933;Dbxref=Genbank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208738.1;transl_table=11 NC_010634.1 RefSeq gene 1023431 1024264 . + . ID=gene934;Name=YPTS_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04690;old_locus_tag=YPTS_0906 NC_010634.1 Protein Homology CDS 1023431 1024264 . + 0 ID=cds890;Parent=gene934;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NC_010634.1 RefSeq gene 1024266 1024481 . + . ID=gene935;Name=YPTS_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04695 NC_010634.1 Protein Homology CDS 1024266 1024481 . + 0 ID=cds891;Parent=gene935;Dbxref=Genbank:WP_011191824.1;Name=WP_011191824.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191824.1;transl_table=11 NC_010634.1 RefSeq gene 1024592 1025380 . + . ID=gene936;Name=YPTS_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04700;old_locus_tag=YPTS_0907 NC_010634.1 Protein Homology CDS 1024592 1025380 . + 0 ID=cds892;Parent=gene936;Dbxref=Genbank:WP_011191825.1;Name=WP_011191825.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_011191825.1;transl_table=11 NC_010634.1 RefSeq gene 1025393 1026061 . + . ID=gene937;Name=YPTS_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04705;old_locus_tag=YPTS_0908 NC_010634.1 Protein Homology CDS 1025393 1026061 . + 0 ID=cds893;Parent=gene937;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NC_010634.1 RefSeq gene 1026058 1026711 . + . ID=gene938;Name=YPTS_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04710;old_locus_tag=YPTS_0909 NC_010634.1 Protein Homology CDS 1026058 1026711 . + 0 ID=cds894;Parent=gene938;Dbxref=Genbank:WP_011191826.1;Name=WP_011191826.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_011191826.1;transl_table=11 NC_010634.1 RefSeq gene 1026692 1027438 . + . ID=gene939;Name=YPTS_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04715;old_locus_tag=YPTS_0910 NC_010634.1 Protein Homology CDS 1026692 1027438 . + 0 ID=cds895;Parent=gene939;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NC_010634.1 RefSeq gene 1027470 1028795 . + . ID=gene940;Name=YPTS_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04720;old_locus_tag=YPTS_0911 NC_010634.1 Protein Homology CDS 1027470 1028795 . + 0 ID=cds896;Parent=gene940;Dbxref=Genbank:WP_011191827.1;Name=WP_011191827.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_011191827.1;transl_table=11 NC_010634.1 RefSeq gene 1028795 1030078 . + . ID=gene941;Name=YPTS_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04725;old_locus_tag=YPTS_0912 NC_010634.1 Protein Homology CDS 1028795 1030078 . + 0 ID=cds897;Parent=gene941;Dbxref=Genbank:WP_011191828.1;Name=WP_011191828.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_011191828.1;transl_table=11 NC_010634.1 RefSeq gene 1030179 1030949 . - . ID=gene942;Name=YPTS_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04730;old_locus_tag=YPTS_0913 NC_010634.1 Protein Homology CDS 1030179 1030949 . - 0 ID=cds898;Parent=gene942;Dbxref=Genbank:WP_011191829.1;Name=WP_011191829.1;Note=NAD(P)-binding;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191829.1;transl_table=11 NC_010634.1 RefSeq gene 1030937 1032097 . - . ID=gene943;Name=YPTS_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04735;old_locus_tag=YPTS_0914 NC_010634.1 Protein Homology CDS 1030937 1032097 . - 0 ID=cds899;Parent=gene943;Dbxref=Genbank:WP_011191830.1;Name=WP_011191830.1;Note=catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine;gbkey=CDS;product=aminotransferase;protein_id=WP_011191830.1;transl_table=11 NC_010634.1 RefSeq gene 1032237 1032905 . + . ID=gene944;Name=YPTS_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04740;old_locus_tag=YPTS_0915 NC_010634.1 Protein Homology CDS 1032237 1032905 . + 0 ID=cds900;Parent=gene944;Dbxref=Genbank:WP_011191831.1;Name=WP_011191831.1;Note=catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway;gbkey=CDS;product=methylthioribulose-1-phosphate dehydratase;protein_id=WP_011191831.1;transl_table=11 NC_010634.1 RefSeq gene 1032902 1033591 . + . ID=gene945;Name=YPTS_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04745;old_locus_tag=YPTS_0916 NC_010634.1 Protein Homology CDS 1032902 1033591 . + 0 ID=cds901;Parent=gene945;Dbxref=Genbank:WP_011191832.1;Name=WP_011191832.1;gbkey=CDS;product=enolase-phosphatase E1;protein_id=WP_011191832.1;transl_table=11 NC_010634.1 RefSeq gene 1033690 1034232 . + . ID=gene946;Name=YPTS_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04750;old_locus_tag=YPTS_0917 NC_010634.1 Protein Homology CDS 1033690 1034232 . + 0 ID=cds902;Parent=gene946;Dbxref=Genbank:WP_011191833.1;Name=WP_011191833.1;gbkey=CDS;product=acireductone dioxygenase;protein_id=WP_011191833.1;transl_table=11 NC_010634.1 RefSeq gene 1034265 1035305 . - . ID=gene947;Name=YPTS_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04755;old_locus_tag=YPTS_0918 NC_010634.1 Protein Homology CDS 1034265 1035305 . - 0 ID=cds903;Parent=gene947;Dbxref=Genbank:WP_011191834.1;Name=WP_011191834.1;gbkey=CDS;product=methylthioribose-1-phosphate isomerase;protein_id=WP_011191834.1;transl_table=11 NC_010634.1 RefSeq gene 1035501 1036724 . + . ID=gene948;Name=YPTS_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04760;old_locus_tag=YPTS_0919 NC_010634.1 Protein Homology CDS 1035501 1036724 . + 0 ID=cds904;Parent=gene948;Dbxref=Genbank:WP_011191835.1;Name=WP_011191835.1;gbkey=CDS;product=methylthioribose kinase;protein_id=WP_011191835.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1037020 1037199 . + . ID=id87;gbkey=repeat_region NC_010634.1 RefSeq gene 1037927 1039717 . + . ID=gene949;Name=YPTS_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04765;old_locus_tag=YPTS_0921 NC_010634.1 Protein Homology CDS 1037927 1039717 . + 0 ID=cds905;Parent=gene949;Dbxref=Genbank:WP_011191836.1;Name=WP_011191836.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_011191836.1;transl_table=11 NC_010634.1 RefSeq gene 1039758 1045490 . + . ID=gene950;Name=YPTS_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04770;old_locus_tag=YPTS_0922 NC_010634.1 Protein Homology CDS 1039758 1045490 . + 0 ID=cds906;Parent=gene950;Dbxref=Genbank:WP_012413504.1;Name=WP_012413504.1;gbkey=CDS;product=adhesin;protein_id=WP_012413504.1;transl_table=11 NC_010634.1 RefSeq gene 1045645 1047498 . + . ID=gene951;Name=YPTS_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04775;old_locus_tag=YPTS_0923 NC_010634.1 Protein Homology CDS 1045645 1047498 . + 0 ID=cds907;Parent=gene951;Dbxref=Genbank:WP_012413505.1;Name=WP_012413505.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_012413505.1;transl_table=11 NC_010634.1 RefSeq gene 1047500 1048246 . + . ID=gene952;Name=YPTS_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04780;old_locus_tag=YPTS_0924 NC_010634.1 Protein Homology CDS 1047500 1048246 . + 0 ID=cds908;Parent=gene952;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NC_010634.1 RefSeq gene 1048418 1050865 . - . ID=gene953;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YPTS_RS04785;old_locus_tag=YPTS_0925 NC_010634.1 Protein Homology CDS 1048418 1050865 . - 0 ID=cds909;Parent=gene953;Dbxref=Genbank:WP_012413506.1;Name=WP_012413506.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_012413506.1;transl_table=11 NC_010634.1 RefSeq gene 1051105 1051686 . + . ID=gene954;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=YPTS_RS04790;old_locus_tag=YPTS_0926 NC_010634.1 Protein Homology CDS 1051105 1051686 . + 0 ID=cds910;Parent=gene954;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11 NC_010634.1 RefSeq gene 1051889 1052662 . + . ID=gene955;Name=YPTS_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04795;old_locus_tag=YPTS_0927 NC_010634.1 Protein Homology CDS 1051889 1052662 . + 0 ID=cds911;Parent=gene955;Dbxref=Genbank:WP_002208719.1;Name=WP_002208719.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NC_010634.1 RefSeq gene 1052627 1053367 . - . ID=gene956;Name=YPTS_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04800;old_locus_tag=YPTS_0928 NC_010634.1 Protein Homology CDS 1052627 1053367 . - 0 ID=cds912;Parent=gene956;Dbxref=Genbank:WP_011191840.1;Name=WP_011191840.1;gbkey=CDS;product=transpeptidase;protein_id=WP_011191840.1;transl_table=11 NC_010634.1 RefSeq gene 1053863 1055206 . + . ID=gene957;Name=YPTS_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04805;old_locus_tag=YPTS_0929 NC_010634.1 Protein Homology CDS 1053863 1055206 . + 0 ID=cds913;Parent=gene957;Dbxref=Genbank:WP_002208717.1;Name=WP_002208717.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11 NC_010634.1 RefSeq gene 1055210 1056451 . + . ID=gene958;Name=YPTS_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04810;old_locus_tag=YPTS_0930 NC_010634.1 Protein Homology CDS 1055210 1056451 . + 0 ID=cds914;Parent=gene958;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11 NC_010634.1 RefSeq gene 1056441 1057241 . + . ID=gene959;Name=YPTS_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04815;old_locus_tag=YPTS_0931 NC_010634.1 Protein Homology CDS 1056441 1057241 . + 0 ID=cds915;Parent=gene959;Dbxref=Genbank:WP_011191841.1;Name=WP_011191841.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_011191841.1;transl_table=11 NC_010634.1 RefSeq gene 1057234 1057863 . + . ID=gene960;Name=YPTS_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04820;old_locus_tag=YPTS_0932 NC_010634.1 Protein Homology CDS 1057234 1057863 . + 0 ID=cds916;Parent=gene960;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11 NC_010634.1 RefSeq gene 1057870 1058466 . + . ID=gene961;Name=YPTS_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04825;old_locus_tag=YPTS_0933 NC_010634.1 Protein Homology CDS 1057870 1058466 . + 0 ID=cds917;Parent=gene961;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11 NC_010634.1 RefSeq gene 1058482 1059705 . + . ID=gene962;Name=YPTS_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04830;old_locus_tag=YPTS_0934 NC_010634.1 Protein Homology CDS 1058482 1059705 . + 0 ID=cds918;Parent=gene962;Dbxref=Genbank:WP_011191842.1;Name=WP_011191842.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_011191842.1;transl_table=11 NC_010634.1 RefSeq gene 1059773 1060768 . + . ID=gene963;Name=YPTS_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04835;old_locus_tag=YPTS_0935 NC_010634.1 Protein Homology CDS 1059773 1060768 . + 0 ID=cds919;Parent=gene963;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11 NC_010634.1 RefSeq gene 1060781 1061008 . + . ID=gene964;Name=YPTS_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04840;old_locus_tag=YPTS_0936 NC_010634.1 Protein Homology CDS 1060781 1061008 . + 0 ID=cds920;Parent=gene964;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11 NC_010634.1 RefSeq gene 1061253 1062200 . - . ID=gene965;Name=YPTS_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04845;old_locus_tag=YPTS_0937 NC_010634.1 Protein Homology CDS 1061253 1062200 . - 0 ID=cds921;Parent=gene965;Dbxref=Genbank:WP_011191843.1;Name=WP_011191843.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_011191843.1;transl_table=11 NC_010634.1 RefSeq gene 1062556 1063614 . + . ID=gene966;Name=YPTS_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04850;old_locus_tag=YPTS_0938 NC_010634.1 Protein Homology CDS 1062556 1063614 . + 0 ID=cds922;Parent=gene966;Dbxref=Genbank:WP_011191844.1;Name=WP_011191844.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_011191844.1;transl_table=11 NC_010634.1 RefSeq gene 1063728 1065188 . - . ID=gene967;Name=YPTS_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04855;old_locus_tag=YPTS_0939 NC_010634.1 Protein Homology CDS 1063728 1065188 . - 0 ID=cds923;Parent=gene967;Dbxref=Genbank:WP_012413508.1;Name=WP_012413508.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_012413508.1;transl_table=11 NC_010634.1 RefSeq gene 1066186 1066341 . + . ID=gene968;Name=YPTS_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04860 NC_010634.1 Protein Homology CDS 1066186 1066341 . + 0 ID=cds924;Parent=gene968;Dbxref=Genbank:WP_032466136.1;Name=WP_032466136.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466136.1;transl_table=11 NC_010634.1 RefSeq gene 1067189 1067974 . + . ID=gene969;Name=YPTS_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04865;old_locus_tag=YPTS_0940 NC_010634.1 Protein Homology CDS 1067189 1067974 . + 0 ID=cds925;Parent=gene969;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11 NC_010634.1 RefSeq gene 1068434 1070038 . - . ID=gene970;Name=YPTS_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04870;old_locus_tag=YPTS_0941 NC_010634.1 Protein Homology CDS 1068434 1070038 . - 0 ID=cds926;Parent=gene970;Dbxref=Genbank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;product=chitin-binding domain protein;protein_id=WP_002208705.1;transl_table=11 NC_010634.1 RefSeq gene 1070235 1070540 . - . ID=gene971;Name=YPTS_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04875;old_locus_tag=YPTS_0942 NC_010634.1 Protein Homology CDS 1070235 1070540 . - 0 ID=cds927;Parent=gene971;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11 NC_010634.1 RefSeq gene 1070967 1071425 . + . ID=gene972;Name=YPTS_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04880;old_locus_tag=YPTS_0943 NC_010634.1 Protein Homology CDS 1070967 1071425 . + 0 ID=cds928;Parent=gene972;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NC_010634.1 RefSeq gene 1071552 1072799 . + . ID=gene973;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YPTS_RS04885;old_locus_tag=YPTS_0944 NC_010634.1 Protein Homology CDS 1071552 1072799 . + 0 ID=cds929;Parent=gene973;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11 NC_010634.1 RefSeq gene 1072859 1073260 . + . ID=gene974;Name=YPTS_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04890;old_locus_tag=YPTS_0945 NC_010634.1 Protein Homology CDS 1072859 1073260 . + 0 ID=cds930;Parent=gene974;Dbxref=Genbank:WP_002208702.1;Name=WP_002208702.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NC_010634.1 RefSeq gene 1073437 1074540 . + . ID=gene975;Name=YPTS_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04895;old_locus_tag=YPTS_0946 NC_010634.1 Protein Homology CDS 1073437 1074540 . + 0 ID=cds931;Parent=gene975;Dbxref=Genbank:WP_002208701.1;Name=WP_002208701.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NC_010634.1 RefSeq gene 1074550 1075809 . + . ID=gene976;Name=YPTS_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04900;old_locus_tag=YPTS_0947 NC_010634.1 Protein Homology CDS 1074550 1075809 . + 0 ID=cds932;Parent=gene976;Dbxref=Genbank:WP_011191846.1;Name=WP_011191846.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_011191846.1;transl_table=11 NC_010634.1 RefSeq gene 1076146 1076895 . + . ID=gene977;Name=YPTS_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04905;old_locus_tag=YPTS_0948 NC_010634.1 Protein Homology CDS 1076146 1076895 . + 0 ID=cds933;Parent=gene977;Dbxref=Genbank:WP_012105592.1;Name=WP_012105592.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_012105592.1;transl_table=11 NC_010634.1 RefSeq gene 1077093 1077347 . + . ID=gene978;Name=YPTS_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04910;old_locus_tag=YPTS_0949 NC_010634.1 Protein Homology CDS 1077093 1077347 . + 0 ID=cds934;Parent=gene978;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11 NC_010634.1 RefSeq gene 1077551 1078114 . + . ID=gene979;Name=YPTS_RS04915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS04915;old_locus_tag=YPTS_0950;partial=true;pseudo=true;start_range=.,1077551 NC_010634.1 Protein Homology CDS 1077551 1078114 . + 0 ID=cds935;Parent=gene979;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,1077551;transl_table=11 NC_010634.1 RefSeq gene 1078361 1078576 . - . ID=gene980;Name=YPTS_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04920 NC_010634.1 Protein Homology CDS 1078361 1078576 . - 0 ID=cds936;Parent=gene980;Dbxref=Genbank:WP_011191849.1;Name=WP_011191849.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191849.1;transl_table=11 NC_010634.1 RefSeq gene 1078845 1079402 . + . ID=gene981;Name=YPTS_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04925;old_locus_tag=YPTS_0951 NC_010634.1 Protein Homology CDS 1078845 1079402 . + 0 ID=cds937;Parent=gene981;Dbxref=Genbank:WP_011191850.1;Name=WP_011191850.1;gbkey=CDS;product=methyltransferase;protein_id=WP_011191850.1;transl_table=11 NC_010634.1 RefSeq gene 1079649 1080173 . + . ID=gene982;Name=YPTS_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04930;old_locus_tag=YPTS_0952 NC_010634.1 Protein Homology CDS 1079649 1080173 . + 0 ID=cds938;Parent=gene982;Dbxref=Genbank:WP_011191851.1;Name=WP_011191851.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_011191851.1;transl_table=11 NC_010634.1 RefSeq gene 1080436 1080607 . + . ID=gene983;Name=YPTS_RS04935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS04935;pseudo=true NC_010634.1 Protein Homology CDS 1080436 1080607 . + 0 ID=cds939;Parent=gene983;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1080670 1080957 . + . ID=gene984;Name=YPTS_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04940;old_locus_tag=YPTS_0953 NC_010634.1 Protein Homology CDS 1080670 1080957 . + 0 ID=cds940;Parent=gene984;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11 NC_010634.1 RefSeq gene 1081179 1082090 . - . ID=gene985;Name=YPTS_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04945;old_locus_tag=YPTS_0954 NC_010634.1 Protein Homology CDS 1081179 1082090 . - 0 ID=cds941;Parent=gene985;Dbxref=Genbank:WP_002208691.1;Name=WP_002208691.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NC_010634.1 RefSeq gene 1082423 1083337 . + . ID=gene986;Name=YPTS_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04950;old_locus_tag=YPTS_0955 NC_010634.1 Protein Homology CDS 1082423 1083337 . + 0 ID=cds942;Parent=gene986;Dbxref=Genbank:WP_011191852.1;Name=WP_011191852.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_011191852.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1083392 1083678 . + . ID=id88;gbkey=repeat_region NC_010634.1 RefSeq gene 1083806 1087495 . - . ID=gene987;Name=YPTS_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04955;old_locus_tag=YPTS_0956 NC_010634.1 Protein Homology CDS 1083806 1087495 . - 0 ID=cds943;Parent=gene987;Dbxref=Genbank:WP_011191853.1;Name=WP_011191853.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_011191853.1;transl_table=11 NC_010634.1 RefSeq gene 1087492 1088736 . - . ID=gene988;Name=YPTS_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04960;old_locus_tag=YPTS_0957 NC_010634.1 Protein Homology CDS 1087492 1088736 . - 0 ID=cds944;Parent=gene988;Dbxref=Genbank:WP_011191854.1;Name=WP_011191854.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease subunit SbcD;protein_id=WP_011191854.1;transl_table=11 NC_010634.1 RefSeq gene 1088855 1088974 . + . ID=gene989;Name=YPTS_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04965 NC_010634.1 Protein Homology CDS 1088855 1088974 . + 0 ID=cds945;Parent=gene989;Dbxref=Genbank:WP_032466141.1;Name=WP_032466141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466141.1;transl_table=11 NC_010634.1 RefSeq gene 1089004 1089693 . + . ID=gene990;Name=YPTS_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04970;old_locus_tag=YPTS_0958 NC_010634.1 Protein Homology CDS 1089004 1089693 . + 0 ID=cds946;Parent=gene990;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11 NC_010634.1 RefSeq gene 1089718 1091034 . + . ID=gene991;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YPTS_RS04975;old_locus_tag=YPTS_0959 NC_010634.1 Protein Homology CDS 1089718 1091034 . + 0 ID=cds947;Parent=gene991;Dbxref=Genbank:WP_002208684.1;Name=WP_002208684.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_002208684.1;transl_table=11 NC_010634.1 RefSeq gene 1091056 1092102 . + . ID=gene992;Name=YPTS_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04980;old_locus_tag=YPTS_0960 NC_010634.1 Protein Homology CDS 1091056 1092102 . + 0 ID=cds948;Parent=gene992;Dbxref=Genbank:WP_012413509.1;Name=WP_012413509.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_012413509.1;transl_table=11 NC_010634.1 RefSeq gene 1092576 1093895 . + . ID=gene993;Name=YPTS_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04985;old_locus_tag=YPTS_0961 NC_010634.1 Protein Homology CDS 1092576 1093895 . + 0 ID=cds949;Parent=gene993;Dbxref=Genbank:WP_002208680.1;Name=WP_002208680.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_002208680.1;transl_table=11 NC_010634.1 RefSeq gene 1093971 1095362 . + . ID=gene994;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPTS_RS04990;old_locus_tag=YPTS_0962 NC_010634.1 Protein Homology CDS 1093971 1095362 . + 0 ID=cds950;Parent=gene994;Dbxref=Genbank:WP_011191856.1;Name=WP_011191856.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_011191856.1;transl_table=11 NC_010634.1 RefSeq gene 1095957 1097786 . + . ID=gene995;Name=YPTS_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS04995;old_locus_tag=YPTS_0963 NC_010634.1 Protein Homology CDS 1095957 1097786 . + 0 ID=cds951;Parent=gene995;Dbxref=Genbank:WP_011191857.1;Name=WP_011191857.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_011191857.1;transl_table=11 NC_010634.1 RefSeq gene 1097941 1098621 . + . ID=gene996;Name=YPTS_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05000;old_locus_tag=YPTS_0964 NC_010634.1 Protein Homology CDS 1097941 1098621 . + 0 ID=cds952;Parent=gene996;Dbxref=Genbank:WP_002208677.1;Name=WP_002208677.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002208677.1;transl_table=11 NC_010634.1 RefSeq gene 1098829 1100592 . - . ID=gene997;Name=YPTS_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05005;old_locus_tag=YPTS_0965 NC_010634.1 Protein Homology CDS 1098829 1100592 . - 0 ID=cds953;Parent=gene997;Dbxref=Genbank:WP_011191858.1;Name=WP_011191858.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_011191858.1;transl_table=11 NC_010634.1 RefSeq gene 1100761 1100862 . + . ID=gene998;Name=YPTS_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05010 NC_010634.1 Protein Homology CDS 1100761 1100862 . + 0 ID=cds954;Parent=gene998;Dbxref=Genbank:WP_038824476.1;Name=WP_038824476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038824476.1;transl_table=11 NC_010634.1 RefSeq gene 1100981 1101583 . - . ID=gene999;Name=YPTS_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05015;old_locus_tag=YPTS_0966 NC_010634.1 Protein Homology CDS 1100981 1101583 . - 0 ID=cds955;Parent=gene999;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11 NC_010634.1 RefSeq gene 1101902 1102483 . - . ID=gene1000;Name=YPTS_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05020;old_locus_tag=YPTS_0967 NC_010634.1 Protein Homology CDS 1101902 1102483 . - 0 ID=cds956;Parent=gene1000;Dbxref=Genbank:WP_002216927.1;Name=WP_002216927.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_002216927.1;transl_table=11 NC_010634.1 RefSeq gene 1102686 1103756 . + . ID=gene1001;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YPTS_RS05025;old_locus_tag=YPTS_0968 NC_010634.1 Protein Homology CDS 1102686 1103756 . + 0 ID=cds957;Parent=gene1001;Dbxref=Genbank:WP_011191859.1;Name=WP_011191859.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_011191859.1;transl_table=11 NC_010634.1 RefSeq gene 1103849 1104973 . + . ID=gene1002;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YPTS_RS05030;old_locus_tag=YPTS_0969 NC_010634.1 Protein Homology CDS 1103849 1104973 . + 0 ID=cds958;Parent=gene1002;Dbxref=Genbank:WP_002208672.1;Name=WP_002208672.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_002208672.1;transl_table=11 NC_010634.1 RefSeq gene 1105085 1105420 . + . ID=gene1003;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YPTS_RS05035;old_locus_tag=YPTS_0970 NC_010634.1 Protein Homology CDS 1105085 1105420 . + 0 ID=cds959;Parent=gene1003;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NC_010634.1 RefSeq gene 1105481 1107295 . + . ID=gene1004;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YPTS_RS05040;old_locus_tag=YPTS_0971 NC_010634.1 Protein Homology CDS 1105481 1107295 . + 0 ID=cds960;Parent=gene1004;Dbxref=Genbank:WP_012413510.1;Name=WP_012413510.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_012413510.1;transl_table=11 NC_010634.1 RefSeq gene 1107306 1108274 . + . ID=gene1005;Name=YPTS_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05045;old_locus_tag=YPTS_0972 NC_010634.1 Protein Homology CDS 1107306 1108274 . + 0 ID=cds961;Parent=gene1005;Dbxref=Genbank:WP_002208669.1;Name=WP_002208669.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NC_010634.1 RefSeq gene 1108526 1109222 . + . ID=gene1006;Name=YPTS_RS05050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS05050;pseudo=true NC_010634.1 Protein Homology CDS 1108526 1109222 . + 0 ID=cds962;Parent=gene1006;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1109255 1109848 . + . ID=gene1007;Name=YPTS_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05055 NC_010634.1 Protein Homology CDS 1109255 1109848 . + 0 ID=cds963;Parent=gene1007;Dbxref=Genbank:WP_032466145.1;Name=WP_032466145.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466145.1;transl_table=11 NC_010634.1 RefSeq gene 1109919 1110368 . + . ID=gene1008;Name=YPTS_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05060;old_locus_tag=YPTS_0974 NC_010634.1 Protein Homology CDS 1109919 1110368 . + 0 ID=cds964;Parent=gene1008;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11 NC_010634.1 RefSeq gene 1110518 1111627 . + . ID=gene1009;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YPTS_RS05065;old_locus_tag=YPTS_0975 NC_010634.1 Protein Homology CDS 1110518 1111627 . + 0 ID=cds965;Parent=gene1009;Dbxref=Genbank:WP_002208667.1;Name=WP_002208667.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_002208667.1;transl_table=11 NC_010634.1 RefSeq gene 1111763 1112233 . + . ID=gene1010;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YPTS_RS05070;old_locus_tag=YPTS_0976 NC_010634.1 Protein Homology CDS 1111763 1112233 . + 0 ID=cds966;Parent=gene1010;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NC_010634.1 RefSeq gene 1112254 1112670 . + . ID=gene1011;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YPTS_RS05075;old_locus_tag=YPTS_0977 NC_010634.1 Protein Homology CDS 1112254 1112670 . + 0 ID=cds967;Parent=gene1011;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11 NC_010634.1 RefSeq gene 1112911 1113900 . + . ID=gene1012;Name=YPTS_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05080;old_locus_tag=YPTS_0978 NC_010634.1 Protein Homology CDS 1112911 1113900 . + 0 ID=cds968;Parent=gene1012;Dbxref=Genbank:WP_011191861.1;Name=WP_011191861.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_011191861.1;transl_table=11 NC_010634.1 RefSeq gene 1113893 1114378 . + . ID=gene1013;Name=YPTS_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05085;old_locus_tag=YPTS_0979 NC_010634.1 Protein Homology CDS 1113893 1114378 . + 0 ID=cds969;Parent=gene1013;Dbxref=Genbank:WP_002208663.1;Name=WP_002208663.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NC_010634.1 RefSeq gene 1114519 1116378 . - . ID=gene1014;Name=YPTS_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05090;old_locus_tag=YPTS_0980 NC_010634.1 Protein Homology CDS 1114519 1116378 . - 0 ID=cds970;Parent=gene1014;Dbxref=Genbank:WP_011191862.1;Name=WP_011191862.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_011191862.1;transl_table=11 NC_010634.1 RefSeq gene 1116534 1117454 . - . ID=gene1015;Name=YPTS_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05095;old_locus_tag=YPTS_0981 NC_010634.1 Protein Homology CDS 1116534 1117454 . - 0 ID=cds971;Parent=gene1015;Dbxref=Genbank:WP_011191863.1;Name=WP_011191863.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_011191863.1;transl_table=11 NC_010634.1 RefSeq gene 1117459 1117713 . - . ID=gene1016;Name=YPTS_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05100;old_locus_tag=YPTS_0982 NC_010634.1 Protein Homology CDS 1117459 1117713 . - 0 ID=cds972;Parent=gene1016;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11 NC_010634.1 RefSeq gene 1117795 1117965 . + . ID=gene1017;Name=YPTS_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05105;old_locus_tag=YPTS_0983 NC_010634.1 Protein Homology CDS 1117795 1117965 . + 0 ID=cds973;Parent=gene1017;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11 NC_010634.1 RefSeq gene 1118063 1119514 . + . ID=gene1018;Name=YPTS_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05110;old_locus_tag=YPTS_0984 NC_010634.1 Protein Homology CDS 1118063 1119514 . + 0 ID=cds974;Parent=gene1018;Dbxref=Genbank:WP_011191864.1;Name=WP_011191864.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_011191864.1;transl_table=11 NC_010634.1 RefSeq gene 1119582 1120172 . - . ID=gene1019;Name=YPTS_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05115;old_locus_tag=YPTS_0985 NC_010634.1 Protein Homology CDS 1119582 1120172 . - 0 ID=cds975;Parent=gene1019;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11 NC_010634.1 RefSeq gene 1120135 1121046 . - . ID=gene1020;Name=YPTS_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05120;old_locus_tag=YPTS_0986 NC_010634.1 Protein Homology CDS 1120135 1121046 . - 0 ID=cds976;Parent=gene1020;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NC_010634.1 RefSeq gene 1121278 1121769 . + . ID=gene1021;Name=YPTS_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05125;old_locus_tag=YPTS_0987 NC_010634.1 Protein Homology CDS 1121278 1121769 . + 0 ID=cds977;Parent=gene1021;Dbxref=Genbank:WP_002208655.1;Name=WP_002208655.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_002208655.1;transl_table=11 NC_010634.1 RefSeq gene 1121893 1123257 . - . ID=gene1022;Name=YPTS_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05130;old_locus_tag=YPTS_0988 NC_010634.1 Protein Homology CDS 1121893 1123257 . - 0 ID=cds978;Parent=gene1022;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11 NC_010634.1 RefSeq gene 1123741 1124628 . - . ID=gene1023;Name=YPTS_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05135;old_locus_tag=YPTS_0989 NC_010634.1 Protein Homology CDS 1123741 1124628 . - 0 ID=cds979;Parent=gene1023;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11 NC_010634.1 RefSeq gene 1124642 1124974 . - . ID=gene1024;Name=YPTS_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05140;old_locus_tag=YPTS_0990 NC_010634.1 Protein Homology CDS 1124642 1124974 . - 0 ID=cds980;Parent=gene1024;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11 NC_010634.1 RefSeq gene 1124974 1125588 . - . ID=gene1025;Name=YPTS_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05145;old_locus_tag=YPTS_0991 NC_010634.1 Protein Homology CDS 1124974 1125588 . - 0 ID=cds981;Parent=gene1025;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11 NC_010634.1 RefSeq gene 1125578 1127569 . - . ID=gene1026;Name=YPTS_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05150;old_locus_tag=YPTS_0992 NC_010634.1 Protein Homology CDS 1125578 1127569 . - 0 ID=cds982;Parent=gene1026;Dbxref=Genbank:WP_002208650.1;Name=WP_002208650.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NC_010634.1 RefSeq gene 1127574 1128530 . - . ID=gene1027;Name=YPTS_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05155;old_locus_tag=YPTS_0993 NC_010634.1 Protein Homology CDS 1127574 1128530 . - 0 ID=cds983;Parent=gene1027;Dbxref=Genbank:WP_002208649.1;Name=WP_002208649.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208649.1;transl_table=11 NC_010634.1 RefSeq gene 1128900 1129667 . - . ID=gene1028;Name=YPTS_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05160;old_locus_tag=YPTS_0994 NC_010634.1 Protein Homology CDS 1128900 1129667 . - 0 ID=cds984;Parent=gene1028;Dbxref=Genbank:WP_002208648.1;Name=WP_002208648.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_002208648.1;transl_table=11 NC_010634.1 RefSeq gene 1129959 1131437 . - . ID=gene1029;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YPTS_RS05165;old_locus_tag=YPTS_0995 NC_010634.1 Protein Homology CDS 1129959 1131437 . - 0 ID=cds985;Parent=gene1029;Dbxref=Genbank:WP_002223277.1;Name=WP_002223277.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_002223277.1;transl_table=11 NC_010634.1 RefSeq gene 1131554 1132132 . - . ID=gene1030;Name=YPTS_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05170;old_locus_tag=YPTS_0996 NC_010634.1 Protein Homology CDS 1131554 1132132 . - 0 ID=cds986;Parent=gene1030;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11 NC_010634.1 RefSeq gene 1132487 1132801 . + . ID=gene1031;Name=YPTS_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05175;old_locus_tag=YPTS_0997 NC_010634.1 Protein Homology CDS 1132487 1132801 . + 0 ID=cds987;Parent=gene1031;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11 NC_010634.1 RefSeq gene 1132960 1133145 . + . ID=gene1032;Name=YPTS_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05180;old_locus_tag=YPTS_0998 NC_010634.1 Protein Homology CDS 1132960 1133145 . + 0 ID=cds988;Parent=gene1032;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11 NC_010634.1 RefSeq gene 1133218 1134522 . + . ID=gene1033;Name=YPTS_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05185;old_locus_tag=YPTS_0999 NC_010634.1 Protein Homology CDS 1133218 1134522 . + 0 ID=cds989;Parent=gene1033;Dbxref=Genbank:WP_002208643.1;Name=WP_002208643.1;gbkey=CDS;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NC_010634.1 RefSeq gene 1134984 1135607 . + . ID=gene1034;Name=YPTS_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05190;old_locus_tag=YPTS_1000 NC_010634.1 Protein Homology CDS 1134984 1135607 . + 0 ID=cds990;Parent=gene1034;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11 NC_010634.1 RefSeq gene 1135813 1137084 . + . ID=gene1035;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YPTS_RS05195;old_locus_tag=YPTS_1001 NC_010634.1 Protein Homology CDS 1135813 1137084 . + 0 ID=cds991;Parent=gene1035;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NC_010634.1 RefSeq gene 1137279 1139633 . + . ID=gene1036;Name=YPTS_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05200;old_locus_tag=YPTS_1002 NC_010634.1 Protein Homology CDS 1137279 1139633 . + 0 ID=cds992;Parent=gene1036;Dbxref=Genbank:WP_002208640.1;Name=WP_002208640.1;gbkey=CDS;product=peptidase;protein_id=WP_002208640.1;transl_table=11 NC_010634.1 RefSeq gene 1139851 1140123 . + . ID=gene1037;Name=YPTS_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05205;old_locus_tag=YPTS_1003 NC_010634.1 Protein Homology CDS 1139851 1140123 . + 0 ID=cds993;Parent=gene1037;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11 NC_010634.1 RefSeq gene 1140424 1142310 . + . ID=gene1038;Name=YPTS_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05210;old_locus_tag=YPTS_1004 NC_010634.1 Protein Homology CDS 1140424 1142310 . + 0 ID=cds994;Parent=gene1038;Dbxref=Genbank:WP_011191866.1;Name=WP_011191866.1;gbkey=CDS;product=folding chaperone;protein_id=WP_011191866.1;transl_table=11 NC_010634.1 RefSeq gene 1142450 1142896 . + . ID=gene1039;Name=YPTS_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05215;old_locus_tag=YPTS_1005 NC_010634.1 Protein Homology CDS 1142450 1142896 . + 0 ID=cds995;Parent=gene1039;Dbxref=Genbank:WP_002208637.1;Name=WP_002208637.1;gbkey=CDS;product=transporter;protein_id=WP_002208637.1;transl_table=11 NC_010634.1 RefSeq gene 1143250 1143657 . + . ID=gene1040;Name=YPTS_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05220;old_locus_tag=YPTS_1006 NC_010634.1 Protein Homology CDS 1143250 1143657 . + 0 ID=cds996;Parent=gene1040;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11 NC_010634.1 RefSeq gene 1143743 1144441 . - . ID=gene1041;Name=YPTS_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05225;old_locus_tag=YPTS_1007 NC_010634.1 Protein Homology CDS 1143743 1144441 . - 0 ID=cds997;Parent=gene1041;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11 NC_010634.1 RefSeq gene 1144730 1146433 . - . ID=gene1042;Name=YPTS_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05230;old_locus_tag=YPTS_1008 NC_010634.1 Protein Homology CDS 1144730 1146433 . - 0 ID=cds998;Parent=gene1042;Dbxref=Genbank:WP_011191867.1;Name=WP_011191867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191867.1;transl_table=11 NC_010634.1 RefSeq gene 1146538 1147359 . + . ID=gene1043;Name=YPTS_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05235;old_locus_tag=YPTS_1009 NC_010634.1 Protein Homology CDS 1146538 1147359 . + 0 ID=cds999;Parent=gene1043;Dbxref=Genbank:WP_012413511.1;Name=WP_012413511.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_012413511.1;transl_table=11 NC_010634.1 RefSeq gene 1147571 1148611 . - . ID=gene1044;Name=YPTS_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05240;old_locus_tag=YPTS_1010 NC_010634.1 Protein Homology CDS 1147571 1148611 . - 0 ID=cds1000;Parent=gene1044;Dbxref=Genbank:WP_011191869.1;Name=WP_011191869.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_011191869.1;transl_table=11 NC_010634.1 RefSeq gene 1148737 1149198 . + . ID=gene1045;Name=YPTS_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05245;old_locus_tag=YPTS_1011 NC_010634.1 Protein Homology CDS 1148737 1149198 . + 0 ID=cds1001;Parent=gene1045;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NC_010634.1 RefSeq gene 1149300 1151066 . + . ID=gene1046;Name=YPTS_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05250;old_locus_tag=YPTS_1012 NC_010634.1 Protein Homology CDS 1149300 1151066 . + 0 ID=cds1002;Parent=gene1046;Dbxref=Genbank:WP_011191870.1;Name=WP_011191870.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191870.1;transl_table=11 NC_010634.1 RefSeq gene 1151059 1152882 . + . ID=gene1047;Name=YPTS_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05255;old_locus_tag=YPTS_1013 NC_010634.1 Protein Homology CDS 1151059 1152882 . + 0 ID=cds1003;Parent=gene1047;Dbxref=Genbank:WP_011191871.1;Name=WP_011191871.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191871.1;transl_table=11 NC_010634.1 RefSeq gene 1153334 1153672 . + . ID=gene1048;Name=YPTS_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05260;old_locus_tag=YPTS_1014 NC_010634.1 Protein Homology CDS 1153334 1153672 . + 0 ID=cds1004;Parent=gene1048;Dbxref=Genbank:WP_002208627.1;Name=WP_002208627.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_002208627.1;transl_table=11 NC_010634.1 RefSeq gene 1153712 1155001 . + . ID=gene1049;Name=YPTS_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05265;old_locus_tag=YPTS_1015 NC_010634.1 Protein Homology CDS 1153712 1155001 . + 0 ID=cds1005;Parent=gene1049;Dbxref=Genbank:WP_041175583.1;Name=WP_041175583.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_041175583.1;transl_table=11 NC_010634.1 RefSeq gene 1155263 1156123 . - . ID=gene1050;Name=YPTS_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05270;old_locus_tag=YPTS_1017 NC_010634.1 Protein Homology CDS 1155263 1156123 . - 0 ID=cds1006;Parent=gene1050;Dbxref=Genbank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_002208625.1;transl_table=11 NC_010634.1 RefSeq gene 1156380 1156901 . + . ID=gene1051;Name=YPTS_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05275;old_locus_tag=YPTS_1018 NC_010634.1 Protein Homology CDS 1156380 1156901 . + 0 ID=cds1007;Parent=gene1051;Dbxref=Genbank:WP_012413513.1;Name=WP_012413513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413513.1;transl_table=11 NC_010634.1 RefSeq gene 1157037 1157426 . - . ID=gene1052;Name=YPTS_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05280 NC_010634.1 Protein Homology CDS 1157037 1157426 . - 0 ID=cds1008;Parent=gene1052;Dbxref=Genbank:WP_002208623.1;Name=WP_002208623.1;gbkey=CDS;product=6-O-methylguanine DNA methyltransferase;protein_id=WP_002208623.1;transl_table=11 NC_010634.1 RefSeq gene 1158332 1158535 . - . ID=gene1053;Name=YPTS_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05285;old_locus_tag=YPTS_1020 NC_010634.1 Protein Homology CDS 1158332 1158535 . - 0 ID=cds1009;Parent=gene1053;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NC_010634.1 RefSeq gene 1158584 1158952 . - . ID=gene1054;Name=YPTS_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05290;old_locus_tag=YPTS_1021 NC_010634.1 Protein Homology CDS 1158584 1158952 . - 0 ID=cds1010;Parent=gene1054;Dbxref=Genbank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218472.1;transl_table=11 NC_010634.1 RefSeq gene 1159111 1159464 . - . ID=gene1055;Name=YPTS_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05295;old_locus_tag=YPTS_1022 NC_010634.1 Protein Homology CDS 1159111 1159464 . - 0 ID=cds1011;Parent=gene1055;Dbxref=Genbank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11 NC_010634.1 RefSeq gene 1160329 1160472 . - . ID=gene1056;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YPTS_RS05300;old_locus_tag=YPTS_1023 NC_010634.1 Protein Homology CDS 1160329 1160472 . - 0 ID=cds1012;Parent=gene1056;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NC_010634.1 RefSeq gene 1160488 1160748 . - . ID=gene1057;Name=YPTS_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05305;old_locus_tag=YPTS_1024 NC_010634.1 Protein Homology CDS 1160488 1160748 . - 0 ID=cds1013;Parent=gene1057;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11 NC_010634.1 RefSeq gene 1160934 1164086 . - . ID=gene1058;Name=YPTS_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05310;old_locus_tag=YPTS_1025 NC_010634.1 Protein Homology CDS 1160934 1164086 . - 0 ID=cds1014;Parent=gene1058;Dbxref=Genbank:WP_011191874.1;Name=WP_011191874.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_011191874.1;transl_table=11 NC_010634.1 RefSeq gene 1164103 1165290 . - . ID=gene1059;Name=YPTS_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05315;old_locus_tag=YPTS_1026 NC_010634.1 Protein Homology CDS 1164103 1165290 . - 0 ID=cds1015;Parent=gene1059;Dbxref=Genbank:WP_002208615.1;Name=WP_002208615.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_002208615.1;transl_table=11 NC_010634.1 RefSeq gene 1165435 1166091 . + . ID=gene1060;Name=YPTS_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05320;old_locus_tag=YPTS_1027 NC_010634.1 Protein Homology CDS 1165435 1166091 . + 0 ID=cds1016;Parent=gene1060;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11 NC_010634.1 RefSeq gene 1166104 1166457 . + . ID=gene1061;Name=YPTS_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05325;old_locus_tag=YPTS_1028 NC_010634.1 Protein Homology CDS 1166104 1166457 . + 0 ID=cds1017;Parent=gene1061;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11 NC_010634.1 RefSeq gene 1166753 1170115 . + . ID=gene1062;Name=YPTS_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05330;old_locus_tag=YPTS_1029 NC_010634.1 Protein Homology CDS 1166753 1170115 . + 0 ID=cds1018;Parent=gene1062;Dbxref=Genbank:WP_012413514.1;Name=WP_012413514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413514.1;transl_table=11 NC_010634.1 RefSeq gene 1170472 1170627 . - . ID=gene1063;Name=YPTS_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05335;old_locus_tag=YPTS_1030 NC_010634.1 Protein Homology CDS 1170472 1170627 . - 0 ID=cds1019;Parent=gene1063;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11 NC_010634.1 RefSeq gene 1170798 1171334 . - . ID=gene1064;Name=YPTS_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05340;old_locus_tag=YPTS_1031 NC_010634.1 Protein Homology CDS 1170798 1171334 . - 0 ID=cds1020;Parent=gene1064;Dbxref=Genbank:WP_011191876.1;Name=WP_011191876.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_011191876.1;transl_table=11 NC_010634.1 RefSeq gene 1171533 1171721 . - . ID=gene1065;Name=YPTS_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05345;old_locus_tag=YPTS_1032 NC_010634.1 Protein Homology CDS 1171533 1171721 . - 0 ID=cds1021;Parent=gene1065;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11 NC_010634.1 RefSeq gene 1172154 1172717 . + . ID=gene1066;Name=YPTS_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05350;old_locus_tag=YPTS_1034 NC_010634.1 Protein Homology CDS 1172154 1172717 . + 0 ID=cds1022;Parent=gene1066;Dbxref=Genbank:WP_012105567.1;Name=WP_012105567.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_012105567.1;transl_table=11 NC_010634.1 RefSeq gene 1173372 1175348 . + . ID=gene1067;Name=YPTS_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05355;old_locus_tag=YPTS_1035 NC_010634.1 Protein Homology CDS 1173372 1175348 . + 0 ID=cds1023;Parent=gene1067;Dbxref=Genbank:WP_002208605.1;Name=WP_002208605.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NC_010634.1 RefSeq gene 1175404 1175736 . + . ID=gene1068;Name=YPTS_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05360;old_locus_tag=YPTS_1036 NC_010634.1 Protein Homology CDS 1175404 1175736 . + 0 ID=cds1024;Parent=gene1068;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11 NC_010634.1 RefSeq gene 1175736 1176341 . + . ID=gene1069;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YPTS_RS05365;old_locus_tag=YPTS_1037 NC_010634.1 Protein Homology CDS 1175736 1176341 . + 0 ID=cds1025;Parent=gene1069;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11 NC_010634.1 RefSeq gene 1176533 1178407 . + . ID=gene1070;Name=YPTS_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05370;old_locus_tag=YPTS_1038 NC_010634.1 Protein Homology CDS 1176533 1178407 . + 0 ID=cds1026;Parent=gene1070;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11 NC_010634.1 RefSeq gene 1178634 1179278 . + . ID=gene1071;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YPTS_RS05375;old_locus_tag=YPTS_1039 NC_010634.1 Protein Homology CDS 1178634 1179278 . + 0 ID=cds1027;Parent=gene1071;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NC_010634.1 RefSeq gene 1179368 1180330 . + . ID=gene1072;Name=YPTS_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05380;old_locus_tag=YPTS_1040 NC_010634.1 Protein Homology CDS 1179368 1180330 . + 0 ID=cds1028;Parent=gene1072;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NC_010634.1 RefSeq gene 1180928 1181917 . + . ID=gene1073;Name=YPTS_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05385;old_locus_tag=YPTS_1041 NC_010634.1 Protein Homology CDS 1180928 1181917 . + 0 ID=cds1029;Parent=gene1073;Dbxref=Genbank:WP_011191878.1;Name=WP_011191878.1;gbkey=CDS;product=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase;protein_id=WP_011191878.1;transl_table=11 NC_010634.1 RefSeq gene 1181955 1182728 . + . ID=gene1074;Name=YPTS_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05390;old_locus_tag=YPTS_1042 NC_010634.1 Protein Homology CDS 1181955 1182728 . + 0 ID=cds1030;Parent=gene1074;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NC_010634.1 RefSeq gene 1182907 1183806 . + . ID=gene1075;Name=YPTS_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05395;old_locus_tag=YPTS_1043 NC_010634.1 Protein Homology CDS 1182907 1183806 . + 0 ID=cds1031;Parent=gene1075;Dbxref=Genbank:WP_002354671.1;Name=WP_002354671.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11 NC_010634.1 RefSeq gene 1183824 1185137 . + . ID=gene1076;Name=YPTS_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05400;old_locus_tag=YPTS_1044 NC_010634.1 Protein Homology CDS 1183824 1185137 . + 0 ID=cds1032;Parent=gene1076;Dbxref=Genbank:WP_012413515.1;Name=WP_012413515.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_012413515.1;transl_table=11 NC_010634.1 RefSeq gene 1185174 1186031 . + . ID=gene1077;Name=YPTS_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05405;old_locus_tag=YPTS_1045 NC_010634.1 Protein Homology CDS 1185174 1186031 . + 0 ID=cds1033;Parent=gene1077;Dbxref=Genbank:WP_011191882.1;Name=WP_011191882.1;gbkey=CDS;product=paratose synthase;protein_id=WP_011191882.1;transl_table=11 NC_010634.1 RefSeq gene 1186032 1187315 . + . ID=gene1078;Name=YPTS_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05410;old_locus_tag=YPTS_1046 NC_010634.1 Protein Homology CDS 1186032 1187315 . + 0 ID=cds1034;Parent=gene1078;Dbxref=Genbank:WP_011191883.1;Name=WP_011191883.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191883.1;transl_table=11 NC_010634.1 RefSeq gene 1187506 1188849 . + . ID=gene1079;Name=YPTS_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05415;old_locus_tag=YPTS_1047 NC_010634.1 Protein Homology CDS 1187506 1188849 . + 0 ID=cds1035;Parent=gene1079;Dbxref=Genbank:WP_012413516.1;Name=WP_012413516.1;gbkey=CDS;product=O-unit flippase-like protein;protein_id=WP_012413516.1;transl_table=11 NC_010634.1 RefSeq gene 1188860 1189540 . + . ID=gene1080;Name=YPTS_RS05420;end_range=1189540,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS05420;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 1188860 1189540 . + 0 ID=cds1036;Parent=gene1080;end_range=1189540,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glycosyl transferase;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1189601 1189852 . + . ID=gene1081;Name=YPTS_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05425 NC_010634.1 Protein Homology CDS 1189601 1189852 . + 0 ID=cds1037;Parent=gene1081;Dbxref=Genbank:WP_042592920.1;Name=WP_042592920.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_042592920.1;transl_table=11 NC_010634.1 RefSeq gene 1190866 1191975 . + . ID=gene1082;Name=YPTS_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05430;old_locus_tag=YPTS_1050 NC_010634.1 Protein Homology CDS 1190866 1191975 . + 0 ID=cds1038;Parent=gene1082;Dbxref=Genbank:WP_012413519.1;Name=WP_012413519.1;gbkey=CDS;product=group 1 glycosyl transferase;protein_id=WP_012413519.1;transl_table=11 NC_010634.1 RefSeq gene 1192055 1193140 . + . ID=gene1083;Name=YPTS_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05435;old_locus_tag=YPTS_1051 NC_010634.1 Protein Homology CDS 1192055 1193140 . + 0 ID=cds1039;Parent=gene1083;Dbxref=Genbank:WP_012413520.1;Name=WP_012413520.1;gbkey=CDS;product=flippase;protein_id=WP_012413520.1;transl_table=11 NC_010634.1 RefSeq gene 1193328 1194470 . + . ID=gene1084;Name=YPTS_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05440;old_locus_tag=YPTS_1052 NC_010634.1 Protein Homology CDS 1193328 1194470 . + 0 ID=cds1040;Parent=gene1084;Dbxref=Genbank:WP_024063207.1;Name=WP_024063207.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_024063207.1;transl_table=11 NC_010634.1 RefSeq gene 1194695 1195528 . + . ID=gene1085;Name=YPTS_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05445;old_locus_tag=YPTS_1053 NC_010634.1 Protein Homology CDS 1194695 1195528 . + 0 ID=cds1041;Parent=gene1085;Dbxref=Genbank:WP_012413522.1;Name=WP_012413522.1;gbkey=CDS;product=NAD-dependent epimerase;protein_id=WP_012413522.1;transl_table=11 NC_010634.1 RefSeq gene 1195531 1196559 . + . ID=gene1086;Name=YPTS_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05450;old_locus_tag=YPTS_1054 NC_010634.1 Protein Homology CDS 1195531 1196559 . + 0 ID=cds1042;Parent=gene1086;Dbxref=Genbank:WP_012413523.1;Name=WP_012413523.1;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_012413523.1;transl_table=11 NC_010634.1 RefSeq gene 1196577 1197605 . + . ID=gene1087;Name=YPTS_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05455;old_locus_tag=YPTS_1055 NC_010634.1 Protein Homology CDS 1196577 1197605 . + 0 ID=cds1043;Parent=gene1087;Dbxref=Genbank:WP_012413524.1;Name=WP_012413524.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_012413524.1;transl_table=11 NC_010634.1 RefSeq gene 1197593 1198183 . + . ID=gene1088;Name=YPTS_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05460;old_locus_tag=YPTS_1056 NC_010634.1 Protein Homology CDS 1197593 1198183 . + 0 ID=cds1044;Parent=gene1088;Dbxref=Genbank:WP_012413525.1;Name=WP_012413525.1;gbkey=CDS;product=phosphoheptose isomerase;protein_id=WP_012413525.1;transl_table=11 NC_010634.1 RefSeq gene 1198185 1198862 . + . ID=gene1089;Name=YPTS_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05465;old_locus_tag=YPTS_1057 NC_010634.1 Protein Homology CDS 1198185 1198862 . + 0 ID=cds1045;Parent=gene1089;Dbxref=Genbank:WP_012413526.1;Name=WP_012413526.1;gbkey=CDS;product=nucleotidyl transferase;protein_id=WP_012413526.1;transl_table=11 NC_010634.1 RefSeq gene 1198859 1199389 . + . ID=gene1090;Name=YPTS_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05470;old_locus_tag=YPTS_1058 NC_010634.1 Protein Homology CDS 1198859 1199389 . + 0 ID=cds1046;Parent=gene1090;Dbxref=Genbank:WP_012413527.1;Name=WP_012413527.1;gbkey=CDS;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=WP_012413527.1;transl_table=11 NC_010634.1 RefSeq gene 1199864 1201015 . + . ID=gene1091;Name=YPTS_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05475;old_locus_tag=YPTS_1060 NC_010634.1 Protein Homology CDS 1199864 1201015 . + 0 ID=cds1047;Parent=gene1091;Dbxref=Genbank:WP_012413529.1;Name=WP_012413529.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_012413529.1;transl_table=11 NC_010634.1 RefSeq gene 1201219 1202523 . + . ID=gene1092;Name=YPTS_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05480;old_locus_tag=YPTS_1061 NC_010634.1 Protein Homology CDS 1201219 1202523 . + 0 ID=cds1048;Parent=gene1092;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NC_010634.1 RefSeq gene 1202620 1204311 . - . ID=gene1093;Name=YPTS_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05485;old_locus_tag=YPTS_1062 NC_010634.1 Protein Homology CDS 1202620 1204311 . - 0 ID=cds1049;Parent=gene1093;Dbxref=Genbank:WP_002208585.1;Name=WP_002208585.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_002208585.1;transl_table=11 NC_010634.1 RefSeq gene 1204546 1205760 . - . ID=gene1094;Name=YPTS_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05490;old_locus_tag=YPTS_1063 NC_010634.1 Protein Homology CDS 1204546 1205760 . - 0 ID=cds1050;Parent=gene1094;Dbxref=Genbank:WP_011191891.1;Name=WP_011191891.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_011191891.1;transl_table=11 NC_010634.1 RefSeq gene 1206042 1207696 . + . ID=gene1095;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=pseudogene;locus_tag=YPTS_RS05495;pseudo=true NC_010634.1 Protein Homology CDS 1206042 1207696 . + 0 ID=cds1051;Parent=gene1095;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ushA;product=5'-nucleotidase;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1207800 1208039 . - . ID=gene1096;Name=YPTS_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05500;old_locus_tag=YPTS_1066 NC_010634.1 Protein Homology CDS 1207800 1208039 . - 0 ID=cds1052;Parent=gene1096;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NC_010634.1 RefSeq gene 1208053 1208310 . - . ID=gene1097;Name=YPTS_RS05505;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS05505;old_locus_tag=YPTS_1067 NC_010634.1 RefSeq repeat_region 1208126 1208295 . + . ID=id89;gbkey=repeat_region NC_010634.1 RefSeq gene 1208376 1208855 . - . ID=gene1098;Name=YPTS_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05510;old_locus_tag=YPTS_1068 NC_010634.1 Protein Homology CDS 1208376 1208855 . - 0 ID=cds1053;Parent=gene1098;Dbxref=Genbank:WP_011191892.1;Name=WP_011191892.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191892.1;transl_table=11 NC_010634.1 RefSeq gene 1209119 1209928 . - . ID=gene1099;Name=YPTS_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05515;old_locus_tag=YPTS_1069 NC_010634.1 Protein Homology CDS 1209119 1209928 . - 0 ID=cds1054;Parent=gene1099;Dbxref=Genbank:WP_002208580.1;Name=WP_002208580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208580.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1209971 1210254 . + . ID=id90;gbkey=repeat_region NC_010634.1 RefSeq gene 1210325 1213210 . - . ID=gene1100;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YPTS_RS05520;old_locus_tag=YPTS_1070 NC_010634.1 Protein Homology CDS 1210325 1213210 . - 0 ID=cds1055;Parent=gene1100;Dbxref=Genbank:WP_012413530.1;Name=WP_012413530.1;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=WP_012413530.1;transl_table=11 NC_010634.1 RefSeq gene 1213417 1213836 . + . ID=gene1101;Name=YPTS_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05525;old_locus_tag=YPTS_1071 NC_010634.1 Protein Homology CDS 1213417 1213836 . + 0 ID=cds1056;Parent=gene1101;Dbxref=Genbank:WP_002208578.1;Name=WP_002208578.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208578.1;transl_table=11 NC_010634.1 RefSeq gene 1214035 1214484 . - . ID=gene1102;Name=YPTS_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05530;old_locus_tag=YPTS_1072 NC_010634.1 Protein Homology CDS 1214035 1214484 . - 0 ID=cds1057;Parent=gene1102;Dbxref=Genbank:WP_012413531.1;Name=WP_012413531.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413531.1;transl_table=11 NC_010634.1 RefSeq gene 1214487 1215401 . - . ID=gene1103;Name=YPTS_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05535;old_locus_tag=YPTS_1073 NC_010634.1 Protein Homology CDS 1214487 1215401 . - 0 ID=cds1058;Parent=gene1103;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11 NC_010634.1 RefSeq gene 1215596 1216465 . - . ID=gene1104;Name=YPTS_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05540;old_locus_tag=YPTS_1074 NC_010634.1 Protein Homology CDS 1215596 1216465 . - 0 ID=cds1059;Parent=gene1104;Dbxref=Genbank:WP_011191894.1;Name=WP_011191894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191894.1;transl_table=11 NC_010634.1 RefSeq gene 1216542 1217318 . - . ID=gene1105;Name=YPTS_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05545;old_locus_tag=YPTS_1075 NC_010634.1 Protein Homology CDS 1216542 1217318 . - 0 ID=cds1060;Parent=gene1105;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NC_010634.1 RefSeq gene 1217705 1218340 . - . ID=gene1106;Name=YPTS_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05550;old_locus_tag=YPTS_1076 NC_010634.1 Protein Homology CDS 1217705 1218340 . - 0 ID=cds1061;Parent=gene1106;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NC_010634.1 RefSeq gene 1218311 1218997 . + . ID=gene1107;Name=YPTS_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05555;old_locus_tag=YPTS_1077 NC_010634.1 Protein Homology CDS 1218311 1218997 . + 0 ID=cds1062;Parent=gene1107;Dbxref=Genbank:WP_011191895.1;Name=WP_011191895.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_011191895.1;transl_table=11 NC_010634.1 RefSeq gene 1218994 1221423 . + . ID=gene1108;Name=YPTS_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05560;old_locus_tag=YPTS_1078 NC_010634.1 Protein Homology CDS 1218994 1221423 . + 0 ID=cds1063;Parent=gene1108;Dbxref=Genbank:WP_011191896.1;Name=WP_011191896.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011191896.1;transl_table=11 NC_010634.1 RefSeq gene 1221467 1222531 . - . ID=gene1109;Name=YPTS_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05565;old_locus_tag=YPTS_1079 NC_010634.1 Protein Homology CDS 1221467 1222531 . - 0 ID=cds1064;Parent=gene1109;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11 NC_010634.1 RefSeq gene 1222528 1223052 . - . ID=gene1110;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YPTS_RS05570;old_locus_tag=YPTS_1080 NC_010634.1 Protein Homology CDS 1222528 1223052 . - 0 ID=cds1065;Parent=gene1110;Dbxref=Genbank:WP_002208569.1;Name=WP_002208569.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NC_010634.1 RefSeq gene 1223368 1224090 . - . ID=gene1111;Name=YPTS_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05575;old_locus_tag=YPTS_1081 NC_010634.1 Protein Homology CDS 1223368 1224090 . - 0 ID=cds1066;Parent=gene1111;Dbxref=Genbank:WP_002208568.1;Name=WP_002208568.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_002208568.1;transl_table=11 NC_010634.1 RefSeq gene 1224101 1224595 . - . ID=gene1112;Name=YPTS_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05580;old_locus_tag=YPTS_1082 NC_010634.1 Protein Homology CDS 1224101 1224595 . - 0 ID=cds1067;Parent=gene1112;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11 NC_010634.1 RefSeq gene 1224806 1226191 . + . ID=gene1113;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YPTS_RS05585;old_locus_tag=YPTS_1083 NC_010634.1 Protein Homology CDS 1224806 1226191 . + 0 ID=cds1068;Parent=gene1113;Dbxref=Genbank:WP_011191897.1;Name=WP_011191897.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_011191897.1;transl_table=11 NC_010634.1 RefSeq gene 1226433 1226645 . - . ID=gene1114;Name=YPTS_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05590;old_locus_tag=YPTS_1084 NC_010634.1 Protein Homology CDS 1226433 1226645 . - 0 ID=cds1069;Parent=gene1114;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11 NC_010634.1 RefSeq gene 1226660 1227526 . - . ID=gene1115;Name=YPTS_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05595;old_locus_tag=YPTS_1085 NC_010634.1 Protein Homology CDS 1226660 1227526 . - 0 ID=cds1070;Parent=gene1115;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11 NC_010634.1 RefSeq gene 1227742 1227818 . + . ID=gene1116;Name=YPTS_RS05600;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS05600;old_locus_tag=YPTS_R0028 NC_010634.1 tRNAscan-SE tRNA 1227742 1227818 . + . ID=rna42;Parent=gene1116;anticodon=(pos:1227776..1227778);gbkey=tRNA;product=tRNA-Arg NC_010634.1 tRNAscan-SE exon 1227742 1227818 . + . ID=id91;Parent=rna42;anticodon=(pos:1227776..1227778);gbkey=tRNA;product=tRNA-Arg NC_010634.1 RefSeq gene 1227894 1228076 . - . ID=gene1117;Name=YPTS_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05605 NC_010634.1 Protein Homology CDS 1227894 1228076 . - 0 ID=cds1071;Parent=gene1117;Dbxref=Genbank:WP_002215270.1;Name=WP_002215270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215270.1;transl_table=11 NC_010634.1 RefSeq gene 1228335 1228535 . - . ID=gene1118;Name=YPTS_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05610;old_locus_tag=YPTS_1087 NC_010634.1 Protein Homology CDS 1228335 1228535 . - 0 ID=cds1072;Parent=gene1118;Dbxref=Genbank:WP_011191898.1;Name=WP_011191898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191898.1;transl_table=11 NC_010634.1 RefSeq gene 1228649 1229296 . - . ID=gene1119;Name=YPTS_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05615;old_locus_tag=YPTS_1088 NC_010634.1 Protein Homology CDS 1228649 1229296 . - 0 ID=cds1073;Parent=gene1119;Dbxref=Genbank:WP_011191899.1;Name=WP_011191899.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191899.1;transl_table=11 NC_010634.1 RefSeq gene 1229281 1229619 . - . ID=gene1120;Name=YPTS_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05620 NC_010634.1 Protein Homology CDS 1229281 1229619 . - 0 ID=cds1074;Parent=gene1120;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NC_010634.1 RefSeq gene 1230192 1230398 . + . ID=gene1121;Name=YPTS_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05625;old_locus_tag=YPTS_1090 NC_010634.1 Protein Homology CDS 1230192 1230398 . + 0 ID=cds1075;Parent=gene1121;Dbxref=Genbank:WP_041175443.1;Name=WP_041175443.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175443.1;transl_table=11 NC_010634.1 RefSeq gene 1230395 1230571 . + . ID=gene1122;Name=YPTS_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05630;old_locus_tag=YPTS_1091 NC_010634.1 Protein Homology CDS 1230395 1230571 . + 0 ID=cds1076;Parent=gene1122;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11 NC_010634.1 RefSeq gene 1230798 1231400 . + . ID=gene1123;Name=YPTS_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05635;old_locus_tag=YPTS_1092 NC_010634.1 Protein Homology CDS 1230798 1231400 . + 0 ID=cds1077;Parent=gene1123;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11 NC_010634.1 RefSeq gene 1231393 1232322 . + . ID=gene1124;Name=YPTS_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05640;old_locus_tag=YPTS_1093 NC_010634.1 Protein Homology CDS 1231393 1232322 . + 0 ID=cds1078;Parent=gene1124;Dbxref=Genbank:WP_011191901.1;Name=WP_011191901.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_011191901.1;transl_table=11 NC_010634.1 RefSeq gene 1232332 1232964 . + . ID=gene1125;Name=YPTS_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05645;old_locus_tag=YPTS_1094 NC_010634.1 Protein Homology CDS 1232332 1232964 . + 0 ID=cds1079;Parent=gene1125;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11 NC_010634.1 RefSeq gene 1232961 1234724 . + . ID=gene1126;Name=YPTS_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05650;old_locus_tag=YPTS_1095 NC_010634.1 Protein Homology CDS 1232961 1234724 . + 0 ID=cds1080;Parent=gene1126;Dbxref=Genbank:WP_011191902.1;Name=WP_011191902.1;gbkey=CDS;product=methyltransferase;protein_id=WP_011191902.1;transl_table=11 NC_010634.1 RefSeq gene 1234717 1236036 . + . ID=gene1127;Name=YPTS_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05655;old_locus_tag=YPTS_1096 NC_010634.1 Protein Homology CDS 1234717 1236036 . + 0 ID=cds1081;Parent=gene1127;Dbxref=Genbank:WP_011191903.1;Name=WP_011191903.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191903.1;transl_table=11 NC_010634.1 RefSeq gene 1236018 1236419 . + . ID=gene1128;Name=YPTS_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05660;old_locus_tag=YPTS_1097 NC_010634.1 Protein Homology CDS 1236018 1236419 . + 0 ID=cds1082;Parent=gene1128;Dbxref=Genbank:WP_012413532.1;Name=WP_012413532.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413532.1;transl_table=11 NC_010634.1 RefSeq gene 1236516 1236821 . + . ID=gene1129;Name=YPTS_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05665;old_locus_tag=YPTS_1098 NC_010634.1 Protein Homology CDS 1236516 1236821 . + 0 ID=cds1083;Parent=gene1129;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11 NC_010634.1 RefSeq gene 1237124 1238017 . + . ID=gene1130;Name=YPTS_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05670;old_locus_tag=YPTS_1099 NC_010634.1 Protein Homology CDS 1237124 1238017 . + 0 ID=cds1084;Parent=gene1130;Dbxref=Genbank:WP_011191905.1;Name=WP_011191905.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191905.1;transl_table=11 NC_010634.1 RefSeq gene 1238072 1239061 . - . ID=gene1131;Name=YPTS_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05675;old_locus_tag=YPTS_1100 NC_010634.1 Protein Homology CDS 1238072 1239061 . - 0 ID=cds1085;Parent=gene1131;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NC_010634.1 RefSeq gene 1239087 1239938 . - . ID=gene1132;Name=YPTS_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05680;old_locus_tag=YPTS_1101 NC_010634.1 Protein Homology CDS 1239087 1239938 . - 0 ID=cds1086;Parent=gene1132;Dbxref=Genbank:WP_011191906.1;Name=WP_011191906.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_011191906.1;transl_table=11 NC_010634.1 RefSeq gene 1240129 1240254 . + . ID=gene1133;Name=YPTS_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05685;old_locus_tag=YPTS_1102 NC_010634.1 Protein Homology CDS 1240129 1240254 . + 0 ID=cds1087;Parent=gene1133;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NC_010634.1 RefSeq gene 1240251 1240394 . + . ID=gene1134;Name=YPTS_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05690;old_locus_tag=YPTS_1103 NC_010634.1 Protein Homology CDS 1240251 1240394 . + 0 ID=cds1088;Parent=gene1134;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NC_010634.1 RefSeq gene 1240411 1242039 . + . ID=gene1135;Name=YPTS_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05695;old_locus_tag=YPTS_1104 NC_010634.1 Protein Homology CDS 1240411 1242039 . + 0 ID=cds1089;Parent=gene1135;Dbxref=Genbank:WP_011191907.1;Name=WP_011191907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191907.1;transl_table=11 NC_010634.1 RefSeq gene 1242118 1244499 . - . ID=gene1136;Name=YPTS_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05700;old_locus_tag=YPTS_1105 NC_010634.1 Protein Homology CDS 1242118 1244499 . - 0 ID=cds1090;Parent=gene1136;Dbxref=Genbank:WP_012413533.1;Name=WP_012413533.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_012413533.1;transl_table=11 NC_010634.1 RefSeq gene 1244655 1245185 . - . ID=gene1137;Name=YPTS_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05705;old_locus_tag=YPTS_1106 NC_010634.1 Protein Homology CDS 1244655 1245185 . - 0 ID=cds1091;Parent=gene1137;Dbxref=Genbank:WP_011191909.1;Name=WP_011191909.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191909.1;transl_table=11 NC_010634.1 RefSeq gene 1245178 1247385 . - . ID=gene1138;Name=YPTS_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05710;old_locus_tag=YPTS_1107 NC_010634.1 Protein Homology CDS 1245178 1247385 . - 0 ID=cds1092;Parent=gene1138;Dbxref=Genbank:WP_011191910.1;Name=WP_011191910.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191910.1;transl_table=11 NC_010634.1 RefSeq gene 1247769 1248641 . + . ID=gene1139;Name=YPTS_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05715;old_locus_tag=YPTS_1109 NC_010634.1 Protein Homology CDS 1247769 1248641 . + 0 ID=cds1093;Parent=gene1139;Dbxref=Genbank:WP_011191911.1;Name=WP_011191911.1;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA;gbkey=CDS;product=23S rRNA pseudouridine synthase F;protein_id=WP_011191911.1;transl_table=11 NC_010634.1 RefSeq gene 1248852 1249973 . + . ID=gene1140;Name=YPTS_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05720;old_locus_tag=YPTS_1110 NC_010634.1 Protein Homology CDS 1248852 1249973 . + 0 ID=cds1094;Parent=gene1140;Dbxref=Genbank:WP_011191912.1;Name=WP_011191912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191912.1;transl_table=11 NC_010634.1 RefSeq gene 1249988 1250553 . - . ID=gene1141;Name=YPTS_RS05725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS05725;pseudo=true NC_010634.1 Protein Homology CDS 1249988 1250553 . - 0 ID=cds1095;Parent=gene1141;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 1250891 1251064 . + . ID=id92;gbkey=repeat_region NC_010634.1 RefSeq gene 1251088 1253004 . - . ID=gene1142;Name=YPTS_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05730;old_locus_tag=YPTS_1113 NC_010634.1 Protein Homology CDS 1251088 1253004 . - 0 ID=cds1096;Parent=gene1142;Dbxref=Genbank:WP_011191913.1;Name=WP_011191913.1;gbkey=CDS;product=autotransporter;protein_id=WP_011191913.1;transl_table=11 NC_010634.1 RefSeq gene 1253813 1254052 . + . ID=gene1143;Name=YPTS_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05735;old_locus_tag=YPTS_1114 NC_010634.1 Protein Homology CDS 1253813 1254052 . + 0 ID=cds1097;Parent=gene1143;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NC_010634.1 RefSeq gene 1254091 1254342 . + . ID=gene1144;Name=YPTS_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05740;old_locus_tag=YPTS_1115 NC_010634.1 Protein Homology CDS 1254091 1254342 . + 0 ID=cds1098;Parent=gene1144;Dbxref=Genbank:WP_011191914.1;Name=WP_011191914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191914.1;transl_table=11 NC_010634.1 RefSeq gene 1254366 1254845 . + . ID=gene1145;Name=YPTS_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05745;old_locus_tag=YPTS_1116 NC_010634.1 Protein Homology CDS 1254366 1254845 . + 0 ID=cds1099;Parent=gene1145;Dbxref=Genbank:WP_011191915.1;Name=WP_011191915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191915.1;transl_table=11 NC_010634.1 RefSeq gene 1254950 1255351 . - . ID=gene1146;Name=YPTS_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05750;old_locus_tag=YPTS_1117 NC_010634.1 Protein Homology CDS 1254950 1255351 . - 0 ID=cds1100;Parent=gene1146;Dbxref=Genbank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209748.1;transl_table=11 NC_010634.1 RefSeq gene 1255583 1255984 . - . ID=gene1147;Name=YPTS_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05755;old_locus_tag=YPTS_1118 NC_010634.1 Protein Homology CDS 1255583 1255984 . - 0 ID=cds1101;Parent=gene1147;Dbxref=Genbank:WP_032467032.1;Name=WP_032467032.1;gbkey=CDS;product=membrane protein;protein_id=WP_032467032.1;transl_table=11 NC_010634.1 RefSeq gene 1256259 1256834 . - . ID=gene1148;Name=YPTS_RS05760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS05760;partial=true;pseudo=true;start_range=.,1256259 NC_010634.1 Protein Homology CDS 1256259 1256834 . - 0 ID=cds1102;Parent=gene1148;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1256259;transl_table=11 NC_010634.1 RefSeq gene 1257507 1257752 . + . ID=gene1149;Name=YPTS_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05765;old_locus_tag=YPTS_1121 NC_010634.1 Protein Homology CDS 1257507 1257752 . + 0 ID=cds1103;Parent=gene1149;Dbxref=Genbank:WP_002209745.1;Name=WP_002209745.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002209745.1;transl_table=11 NC_010634.1 RefSeq gene 1257965 1260328 . - . ID=gene1150;Name=YPTS_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05770;old_locus_tag=YPTS_1122 NC_010634.1 Protein Homology CDS 1257965 1260328 . - 0 ID=cds1104;Parent=gene1150;Dbxref=Genbank:WP_012413535.1;Name=WP_012413535.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_012413535.1;transl_table=11 NC_010634.1 RefSeq gene 1260385 1266363 . - . ID=gene1151;Name=YPTS_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05775;old_locus_tag=YPTS_1123 NC_010634.1 Protein Homology CDS 1260385 1266363 . - 0 ID=cds1105;Parent=gene1151;Dbxref=Genbank:WP_012413536.1;Name=WP_012413536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413536.1;transl_table=11 NC_010634.1 RefSeq gene 1266964 1267818 . - . ID=gene1152;Name=YPTS_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05780;old_locus_tag=YPTS_1125 NC_010634.1 Protein Homology CDS 1266964 1267818 . - 0 ID=cds1106;Parent=gene1152;Dbxref=Genbank:WP_002210296.1;Name=WP_002210296.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_002210296.1;transl_table=11 NC_010634.1 RefSeq gene 1268160 1269686 . + . ID=gene1153;Name=YPTS_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05785;old_locus_tag=YPTS_1126 NC_010634.1 Protein Homology CDS 1268160 1269686 . + 0 ID=cds1107;Parent=gene1153;Dbxref=Genbank:WP_011191918.1;Name=WP_011191918.1;gbkey=CDS;product=methylmalonate-semialdehyde dehydrogenase;protein_id=WP_011191918.1;transl_table=11 NC_010634.1 RefSeq gene 1269721 1271646 . + . ID=gene1154;Name=YPTS_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05790;old_locus_tag=YPTS_1127 NC_010634.1 Protein Homology CDS 1269721 1271646 . + 0 ID=cds1108;Parent=gene1154;Dbxref=Genbank:WP_041175491.1;Name=WP_041175491.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_041175491.1;transl_table=11 NC_010634.1 RefSeq gene 1271940 1272926 . + . ID=gene1155;Name=YPTS_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05795;old_locus_tag=YPTS_1129 NC_010634.1 Protein Homology CDS 1271940 1272926 . + 0 ID=cds1109;Parent=gene1155;Dbxref=Genbank:WP_011191920.1;Name=WP_011191920.1;gbkey=CDS;product=inositol 2-dehydrogenase;protein_id=WP_011191920.1;transl_table=11 NC_010634.1 RefSeq gene 1273052 1273981 . + . ID=gene1156;Name=YPTS_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05800;old_locus_tag=YPTS_1130 NC_010634.1 Protein Homology CDS 1273052 1273981 . + 0 ID=cds1110;Parent=gene1156;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11 NC_010634.1 RefSeq gene 1274030 1275577 . + . ID=gene1157;Name=YPTS_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05805;old_locus_tag=YPTS_1131 NC_010634.1 Protein Homology CDS 1274030 1275577 . + 0 ID=cds1111;Parent=gene1157;Dbxref=Genbank:WP_011191921.1;Name=WP_011191921.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_011191921.1;transl_table=11 NC_010634.1 RefSeq gene 1275589 1276617 . + . ID=gene1158;Name=YPTS_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05810;old_locus_tag=YPTS_1132 NC_010634.1 Protein Homology CDS 1275589 1276617 . + 0 ID=cds1112;Parent=gene1158;Dbxref=Genbank:WP_002210302.1;Name=WP_002210302.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NC_010634.1 RefSeq gene 1276641 1277774 . + . ID=gene1159;Name=YPTS_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05815;old_locus_tag=YPTS_1133 NC_010634.1 Protein Homology CDS 1276641 1277774 . + 0 ID=cds1113;Parent=gene1159;Dbxref=Genbank:WP_012413538.1;Name=WP_012413538.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_012413538.1;transl_table=11 NC_010634.1 RefSeq gene 1277934 1279811 . + . ID=gene1160;Name=YPTS_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05820;old_locus_tag=YPTS_1134 NC_010634.1 Protein Homology CDS 1277934 1279811 . + 0 ID=cds1114;Parent=gene1160;Dbxref=Genbank:WP_041175492.1;Name=WP_041175492.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_041175492.1;transl_table=11 NC_010634.1 RefSeq gene 1280018 1280938 . + . ID=gene1161;Name=YPTS_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05825 NC_010634.1 Protein Homology CDS 1280018 1280938 . + 0 ID=cds1115;Parent=gene1161;Dbxref=Genbank:WP_011191924.1;Name=WP_011191924.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_011191924.1;transl_table=11 NC_010634.1 RefSeq gene 1280948 1281763 . + . ID=gene1162;Name=YPTS_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05830;old_locus_tag=YPTS_1136 NC_010634.1 Protein Homology CDS 1280948 1281763 . + 0 ID=cds1116;Parent=gene1162;Dbxref=Genbank:WP_011191925.1;Name=WP_011191925.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_011191925.1;transl_table=11 NC_010634.1 RefSeq gene 1281922 1282125 . + . ID=gene1163;Name=YPTS_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05835;old_locus_tag=YPTS_1137 NC_010634.1 Protein Homology CDS 1281922 1282125 . + 0 ID=cds1117;Parent=gene1163;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11 NC_010634.1 RefSeq gene 1282333 1284123 . + . ID=gene1164;Name=YPTS_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05840;old_locus_tag=YPTS_1138 NC_010634.1 Protein Homology CDS 1282333 1284123 . + 0 ID=cds1118;Parent=gene1164;Dbxref=Genbank:WP_002214723.1;Name=WP_002214723.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002214723.1;transl_table=11 NC_010634.1 RefSeq gene 1284139 1284426 . - . ID=gene1165;Name=YPTS_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05845;old_locus_tag=YPTS_1139 NC_010634.1 Protein Homology CDS 1284139 1284426 . - 0 ID=cds1119;Parent=gene1165;Dbxref=Genbank:WP_002210309.1;Name=WP_002210309.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002210309.1;transl_table=11 NC_010634.1 RefSeq gene 1284869 1285063 . + . ID=gene1166;Name=YPTS_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05850;old_locus_tag=YPTS_1140 NC_010634.1 Protein Homology CDS 1284869 1285063 . + 0 ID=cds1120;Parent=gene1166;Dbxref=Genbank:WP_012105528.1;Name=WP_012105528.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_012105528.1;transl_table=11 NC_010634.1 RefSeq gene 1285081 1285260 . - . ID=gene1167;Name=YPTS_RS05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS05855;pseudo=true NC_010634.1 Protein Homology CDS 1285081 1285260 . - 0 ID=cds1121;Parent=gene1167;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1285442 1286407 . - . ID=gene1168;Name=YPTS_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05860;old_locus_tag=YPTS_1141 NC_010634.1 Protein Homology CDS 1285442 1286407 . - 0 ID=cds1122;Parent=gene1168;Dbxref=Genbank:WP_011191928.1;Name=WP_011191928.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191928.1;transl_table=11 NC_010634.1 RefSeq gene 1286857 1287447 . + . ID=gene1169;Name=YPTS_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05865;old_locus_tag=YPTS_1142 NC_010634.1 Protein Homology CDS 1286857 1287447 . + 0 ID=cds1123;Parent=gene1169;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NC_010634.1 RefSeq gene 1287737 1288216 . - . ID=gene1170;Name=YPTS_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05870;old_locus_tag=YPTS_1143 NC_010634.1 Protein Homology CDS 1287737 1288216 . - 0 ID=cds1124;Parent=gene1170;Dbxref=Genbank:WP_012304395.1;Name=WP_012304395.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012304395.1;transl_table=11 NC_010634.1 cmsearch region 1288322 1288750 . + . ID=id93;Note=cspA;gbkey=misc_feature NC_010634.1 RefSeq gene 1288495 1288704 . + . ID=gene1171;Name=YPTS_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05875;old_locus_tag=YPTS_1144 NC_010634.1 Protein Homology CDS 1288495 1288704 . + 0 ID=cds1125;Parent=gene1171;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11 NC_010634.1 RefSeq gene 1289127 1289510 . - . ID=gene1172;Name=YPTS_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05880;old_locus_tag=YPTS_1145 NC_010634.1 Protein Homology CDS 1289127 1289510 . - 0 ID=cds1126;Parent=gene1172;Dbxref=Genbank:WP_011191930.1;Name=WP_011191930.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_011191930.1;transl_table=11 NC_010634.1 RefSeq gene 1289870 1290022 . + . ID=gene1173;Name=YPTS_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05885;old_locus_tag=YPTS_1146 NC_010634.1 Protein Homology CDS 1289870 1290022 . + 0 ID=cds1127;Parent=gene1173;Dbxref=Genbank:WP_012304394.1;Name=WP_012304394.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304394.1;transl_table=11 NC_010634.1 RefSeq gene 1290077 1290334 . + . ID=gene1174;Name=YPTS_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05890;old_locus_tag=YPTS_1147 NC_010634.1 Protein Homology CDS 1290077 1290334 . + 0 ID=cds1128;Parent=gene1174;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11 NC_010634.1 RefSeq gene 1290515 1291480 . - . ID=gene1175;Name=YPTS_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05895;old_locus_tag=YPTS_1148 NC_010634.1 Protein Homology CDS 1290515 1291480 . - 0 ID=cds1129;Parent=gene1175;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NC_010634.1 RefSeq gene 1291673 1292374 . - . ID=gene1176;Name=YPTS_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05900;old_locus_tag=YPTS_1149 NC_010634.1 Protein Homology CDS 1291673 1292374 . - 0 ID=cds1130;Parent=gene1176;Dbxref=Genbank:WP_002218201.1;Name=WP_002218201.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_002218201.1;transl_table=11 NC_010634.1 RefSeq gene 1292586 1292849 . - . ID=gene1177;Name=YPTS_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05905;old_locus_tag=YPTS_1150 NC_010634.1 Protein Homology CDS 1292586 1292849 . - 0 ID=cds1131;Parent=gene1177;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11 NC_010634.1 RefSeq gene 1293047 1294249 . - . ID=gene1178;Name=YPTS_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05910;old_locus_tag=YPTS_1151 NC_010634.1 Protein Homology CDS 1293047 1294249 . - 0 ID=cds1132;Parent=gene1178;Dbxref=Genbank:WP_002210323.1;Name=WP_002210323.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002210323.1;transl_table=11 NC_010634.1 RefSeq gene 1294652 1295734 . - . ID=gene1179;Name=YPTS_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05915;old_locus_tag=YPTS_1152 NC_010634.1 Protein Homology CDS 1294652 1295734 . - 0 ID=cds1133;Parent=gene1179;Dbxref=Genbank:WP_012413541.1;Name=WP_012413541.1;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413541.1;transl_table=11 NC_010634.1 RefSeq gene 1295744 1296856 . - . ID=gene1180;Name=YPTS_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05920;old_locus_tag=YPTS_1153 NC_010634.1 Protein Homology CDS 1295744 1296856 . - 0 ID=cds1134;Parent=gene1180;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11 NC_010634.1 RefSeq gene 1297042 1298937 . - . ID=gene1181;Name=YPTS_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05925;old_locus_tag=YPTS_1154 NC_010634.1 Protein Homology CDS 1297042 1298937 . - 0 ID=cds1135;Parent=gene1181;Dbxref=Genbank:WP_011191932.1;Name=WP_011191932.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_011191932.1;transl_table=11 NC_010634.1 RefSeq gene 1299019 1299489 . - . ID=gene1182;Name=YPTS_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05930;old_locus_tag=YPTS_1155 NC_010634.1 Protein Homology CDS 1299019 1299489 . - 0 ID=cds1136;Parent=gene1182;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11 NC_010634.1 RefSeq gene 1299493 1299810 . - . ID=gene1183;Name=YPTS_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05935;old_locus_tag=YPTS_1156 NC_010634.1 Protein Homology CDS 1299493 1299810 . - 0 ID=cds1137;Parent=gene1183;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11 NC_010634.1 RefSeq gene 1300033 1300695 . - . ID=gene1184;Name=YPTS_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05940;old_locus_tag=YPTS_1157 NC_010634.1 Protein Homology CDS 1300033 1300695 . - 0 ID=cds1138;Parent=gene1184;Dbxref=Genbank:WP_002210330.1;Name=WP_002210330.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NC_010634.1 RefSeq gene 1300685 1301719 . - . ID=gene1185;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YPTS_RS05945;old_locus_tag=YPTS_1158 NC_010634.1 Protein Homology CDS 1300685 1301719 . - 0 ID=cds1139;Parent=gene1185;Dbxref=Genbank:WP_011191933.1;Name=WP_011191933.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_011191933.1;transl_table=11 NC_010634.1 RefSeq gene 1301716 1302339 . - . ID=gene1186;Name=YPTS_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05950;old_locus_tag=YPTS_1159 NC_010634.1 Protein Homology CDS 1301716 1302339 . - 0 ID=cds1140;Parent=gene1186;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11 NC_010634.1 RefSeq gene 1302354 1304936 . - . ID=gene1187;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YPTS_RS05955;old_locus_tag=YPTS_1160 NC_010634.1 Protein Homology CDS 1302354 1304936 . - 0 ID=cds1141;Parent=gene1187;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NC_010634.1 RefSeq gene 1305198 1305680 . + . ID=gene1188;Name=YPTS_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05960;old_locus_tag=YPTS_1161 NC_010634.1 Protein Homology CDS 1305198 1305680 . + 0 ID=cds1142;Parent=gene1188;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11 NC_010634.1 RefSeq gene 1305814 1306539 . - . ID=gene1189;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YPTS_RS05965;old_locus_tag=YPTS_1162 NC_010634.1 Protein Homology CDS 1305814 1306539 . - 0 ID=cds1143;Parent=gene1189;Dbxref=Genbank:WP_002210336.1;Name=WP_002210336.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NC_010634.1 RefSeq gene 1306539 1307213 . - . ID=gene1190;Name=YPTS_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05970;old_locus_tag=YPTS_1163 NC_010634.1 Protein Homology CDS 1306539 1307213 . - 0 ID=cds1144;Parent=gene1190;Dbxref=Genbank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;product=glutamate/aspartate transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NC_010634.1 RefSeq gene 1307213 1307953 . - . ID=gene1191;Name=YPTS_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05975;old_locus_tag=YPTS_1164 NC_010634.1 Protein Homology CDS 1307213 1307953 . - 0 ID=cds1145;Parent=gene1191;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11 NC_010634.1 RefSeq gene 1308127 1309044 . - . ID=gene1192;Name=YPTS_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05980;old_locus_tag=YPTS_1165 NC_010634.1 Protein Homology CDS 1308127 1309044 . - 0 ID=cds1146;Parent=gene1192;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11 NC_010634.1 RefSeq gene 1309793 1311340 . - . ID=gene1193;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YPTS_RS05985;old_locus_tag=YPTS_1166 NC_010634.1 Protein Homology CDS 1309793 1311340 . - 0 ID=cds1147;Parent=gene1193;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NC_010634.1 RefSeq gene 1311348 1312226 . - . ID=gene1194;Name=YPTS_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05990;old_locus_tag=YPTS_1167 NC_010634.1 Protein Homology CDS 1311348 1312226 . - 0 ID=cds1148;Parent=gene1194;Dbxref=Genbank:WP_002210342.1;Name=WP_002210342.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_002210342.1;transl_table=11 NC_010634.1 RefSeq gene 1312344 1312817 . - . ID=gene1195;Name=YPTS_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS05995;old_locus_tag=YPTS_1168 NC_010634.1 Protein Homology CDS 1312344 1312817 . - 0 ID=cds1149;Parent=gene1195;Dbxref=Genbank:WP_011191934.1;Name=WP_011191934.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_011191934.1;transl_table=11 NC_010634.1 RefSeq gene 1312814 1313869 . - . ID=gene1196;Name=YPTS_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06000;old_locus_tag=YPTS_1169 NC_010634.1 Protein Homology CDS 1312814 1313869 . - 0 ID=cds1150;Parent=gene1196;Dbxref=Genbank:WP_032466632.1;Name=WP_032466632.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_032466632.1;transl_table=11 NC_010634.1 RefSeq gene 1314214 1315638 . - . ID=gene1197;Name=YPTS_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06005;old_locus_tag=YPTS_1170 NC_010634.1 Protein Homology CDS 1314214 1315638 . - 0 ID=cds1151;Parent=gene1197;Dbxref=Genbank:WP_011191936.1;Name=WP_011191936.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_011191936.1;transl_table=11 NC_010634.1 RefSeq gene 1315880 1317061 . + . ID=gene1198;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=YPTS_RS06010;old_locus_tag=YPTS_1171 NC_010634.1 Protein Homology CDS 1315880 1317061 . + 0 ID=cds1152;Parent=gene1198;Dbxref=Genbank:WP_011191937.1;Name=WP_011191937.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_011191937.1;transl_table=11 NC_010634.1 RefSeq gene 1317474 1317548 . - . ID=gene1199;Name=YPTS_RS06020;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06020;old_locus_tag=YPTS_R0079 NC_010634.1 tRNAscan-SE tRNA 1317474 1317548 . - . ID=rna43;Parent=gene1199;anticodon=(pos:complement(1317514..1317516));gbkey=tRNA;product=tRNA-Gln NC_010634.1 tRNAscan-SE exon 1317474 1317548 . - . ID=id94;Parent=rna43;anticodon=(pos:complement(1317514..1317516));gbkey=tRNA;product=tRNA-Gln NC_010634.1 RefSeq gene 1317554 1317630 . - . ID=gene1200;Name=YPTS_RS06025;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06025;old_locus_tag=YPTS_R0078 NC_010634.1 tRNAscan-SE tRNA 1317554 1317630 . - . ID=rna44;Parent=gene1200;anticodon=(pos:complement(1317594..1317596));gbkey=tRNA;product=tRNA-Met NC_010634.1 tRNAscan-SE exon 1317554 1317630 . - . ID=id95;Parent=rna44;anticodon=(pos:complement(1317594..1317596));gbkey=tRNA;product=tRNA-Met NC_010634.1 RefSeq gene 1317663 1317737 . - . ID=gene1201;Name=YPTS_RS06030;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06030;old_locus_tag=YPTS_R0077 NC_010634.1 tRNAscan-SE tRNA 1317663 1317737 . - . ID=rna45;Parent=gene1201;anticodon=(pos:complement(1317703..1317705));gbkey=tRNA;product=tRNA-Gln NC_010634.1 tRNAscan-SE exon 1317663 1317737 . - . ID=id96;Parent=rna45;anticodon=(pos:complement(1317703..1317705));gbkey=tRNA;product=tRNA-Gln NC_010634.1 RefSeq gene 1317821 1317895 . - . ID=gene1202;Name=YPTS_RS06035;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06035;old_locus_tag=YPTS_R0076 NC_010634.1 tRNAscan-SE tRNA 1317821 1317895 . - . ID=rna46;Parent=gene1202;anticodon=(pos:complement(1317861..1317863));gbkey=tRNA;product=tRNA-Gln NC_010634.1 tRNAscan-SE exon 1317821 1317895 . - . ID=id97;Parent=rna46;anticodon=(pos:complement(1317861..1317863));gbkey=tRNA;product=tRNA-Gln NC_010634.1 RefSeq gene 1317925 1318009 . - . ID=gene1203;Name=YPTS_RS06040;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06040;old_locus_tag=YPTS_R0075 NC_010634.1 tRNAscan-SE tRNA 1317925 1318009 . - . ID=rna47;Parent=gene1203;anticodon=(pos:complement(1317973..1317975));gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 1317925 1318009 . - . ID=id98;Parent=rna47;anticodon=(pos:complement(1317973..1317975));gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq gene 1318017 1318093 . - . ID=gene1204;Name=YPTS_RS06045;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06045;old_locus_tag=YPTS_R0074 NC_010634.1 tRNAscan-SE tRNA 1318017 1318093 . - . ID=rna48;Parent=gene1204;anticodon=(pos:complement(1318057..1318059));gbkey=tRNA;product=tRNA-Met NC_010634.1 tRNAscan-SE exon 1318017 1318093 . - . ID=id99;Parent=rna48;anticodon=(pos:complement(1318057..1318059));gbkey=tRNA;product=tRNA-Met NC_010634.1 RefSeq gene 1318365 1318502 . + . ID=gene1205;Name=YPTS_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06050 NC_010634.1 Protein Homology CDS 1318365 1318502 . + 0 ID=cds1153;Parent=gene1205;Dbxref=Genbank:WP_032467029.1;Name=WP_032467029.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467029.1;transl_table=11 NC_010634.1 RefSeq gene 1318551 1320215 . - . ID=gene1206;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YPTS_RS06055;old_locus_tag=YPTS_1173 NC_010634.1 Protein Homology CDS 1318551 1320215 . - 0 ID=cds1154;Parent=gene1206;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11 NC_010634.1 RefSeq gene 1320570 1321322 . - . ID=gene1207;Name=YPTS_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06060;old_locus_tag=YPTS_1174 NC_010634.1 Protein Homology CDS 1320570 1321322 . - 0 ID=cds1155;Parent=gene1207;Dbxref=Genbank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_002210349.1;transl_table=11 NC_010634.1 RefSeq gene 1321395 1322621 . - . ID=gene1208;Name=YPTS_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06065;old_locus_tag=YPTS_1175 NC_010634.1 Protein Homology CDS 1321395 1322621 . - 0 ID=cds1156;Parent=gene1208;Dbxref=Genbank:WP_002224863.1;Name=WP_002224863.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002224863.1;transl_table=11 NC_010634.1 RefSeq gene 1322638 1323783 . - . ID=gene1209;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPTS_RS06070;old_locus_tag=YPTS_1176 NC_010634.1 Protein Homology CDS 1322638 1323783 . - 0 ID=cds1157;Parent=gene1209;Dbxref=Genbank:WP_002210351.1;Name=WP_002210351.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11 NC_010634.1 RefSeq gene 1323803 1324603 . - . ID=gene1210;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YPTS_RS06075;old_locus_tag=YPTS_1177 NC_010634.1 Protein Homology CDS 1323803 1324603 . - 0 ID=cds1158;Parent=gene1210;Dbxref=Genbank:WP_002210352.1;Name=WP_002210352.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_002210352.1;transl_table=11 NC_010634.1 RefSeq gene 1325002 1327035 . + . ID=gene1211;Name=YPTS_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06080;old_locus_tag=YPTS_1178 NC_010634.1 Protein Homology CDS 1325002 1327035 . + 0 ID=cds1159;Parent=gene1211;Dbxref=Genbank:WP_011191938.1;Name=WP_011191938.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetylglucosamine transporter subunit IIABC;protein_id=WP_011191938.1;transl_table=11 NC_010634.1 RefSeq gene 1327250 1328917 . + . ID=gene1212;Name=YPTS_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06085;old_locus_tag=YPTS_1179 NC_010634.1 Protein Homology CDS 1327250 1328917 . + 0 ID=cds1160;Parent=gene1212;Dbxref=Genbank:WP_002210354.1;Name=WP_002210354.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NC_010634.1 RefSeq gene 1329623 1331044 . + . ID=gene1213;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YPTS_RS06090;old_locus_tag=YPTS_1180 NC_010634.1 Protein Homology CDS 1329623 1331044 . + 0 ID=cds1161;Parent=gene1213;Dbxref=Genbank:WP_011191939.1;Name=WP_011191939.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=porin;protein_id=WP_011191939.1;transl_table=11 NC_010634.1 RefSeq gene 1331372 1334047 . + . ID=gene1214;Name=YPTS_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06095;old_locus_tag=YPTS_1181 NC_010634.1 Protein Homology CDS 1331372 1334047 . + 0 ID=cds1162;Parent=gene1214;Dbxref=Genbank:WP_011191940.1;Name=WP_011191940.1;gbkey=CDS;product=beta-N-acetylhexosaminidase;protein_id=WP_011191940.1;transl_table=11 NC_010634.1 RefSeq gene 1334488 1334934 . - . ID=gene1215;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YPTS_RS06100;old_locus_tag=YPTS_1182 NC_010634.1 Protein Homology CDS 1334488 1334934 . - 0 ID=cds1163;Parent=gene1215;Dbxref=Genbank:WP_011191941.1;Name=WP_011191941.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=WP_011191941.1;transl_table=11 NC_010634.1 RefSeq gene 1335301 1335828 . - . ID=gene1216;Name=YPTS_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06105;old_locus_tag=YPTS_1183 NC_010634.1 Protein Homology CDS 1335301 1335828 . - 0 ID=cds1164;Parent=gene1216;Dbxref=Genbank:WP_002215386.1;Name=WP_002215386.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002215386.1;transl_table=11 NC_010634.1 RefSeq gene 1336265 1336552 . - . ID=gene1217;Name=YPTS_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06110;old_locus_tag=YPTS_1184 NC_010634.1 Protein Homology CDS 1336265 1336552 . - 0 ID=cds1165;Parent=gene1217;Dbxref=Genbank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NC_010634.1 RefSeq gene 1336607 1336732 . + . ID=gene1218;Name=YPTS_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06115 NC_010634.1 Protein Homology CDS 1336607 1336732 . + 0 ID=cds1166;Parent=gene1218;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11 NC_010634.1 RefSeq gene 1336884 1337651 . - . ID=gene1219;Name=YPTS_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06120;old_locus_tag=YPTS_1187 NC_010634.1 Protein Homology CDS 1336884 1337651 . - 0 ID=cds1167;Parent=gene1219;Dbxref=Genbank:WP_011191942.1;Name=WP_011191942.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_011191942.1;transl_table=11 NC_010634.1 RefSeq gene 1338362 1338613 . + . ID=gene1220;Name=YPTS_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06125;old_locus_tag=YPTS_1189 NC_010634.1 Protein Homology CDS 1338362 1338613 . + 0 ID=cds1168;Parent=gene1220;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NC_010634.1 RefSeq gene 1338776 1338961 . - . ID=gene1221;Name=YPTS_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06130;old_locus_tag=YPTS_1190 NC_010634.1 Protein Homology CDS 1338776 1338961 . - 0 ID=cds1169;Parent=gene1221;Dbxref=Genbank:WP_012413544.1;Name=WP_012413544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413544.1;transl_table=11 NC_010634.1 RefSeq gene 1339044 1339307 . - . ID=gene1222;Name=YPTS_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06135;old_locus_tag=YPTS_1191 NC_010634.1 Protein Homology CDS 1339044 1339307 . - 0 ID=cds1170;Parent=gene1222;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11 NC_010634.1 RefSeq gene 1339377 1339886 . - . ID=gene1223;Name=YPTS_RS06140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS06140;old_locus_tag=YPTS_1192;partial=true;pseudo=true;start_range=.,1339377 NC_010634.1 Protein Homology CDS 1339377 1339886 . - 0 ID=cds1171;Parent=gene1223;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=integrase;pseudo=true;start_range=.,1339377;transl_table=11 NC_010634.1 RefSeq gene 1340231 1341064 . - . ID=gene1224;Name=YPTS_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06145;old_locus_tag=YPTS_1193 NC_010634.1 Protein Homology CDS 1340231 1341064 . - 0 ID=cds1172;Parent=gene1224;Dbxref=Genbank:WP_012413546.1;Name=WP_012413546.1;gbkey=CDS;product=restriction methylase;protein_id=WP_012413546.1;transl_table=11 NC_010634.1 RefSeq gene 1341178 1341498 . - . ID=gene1225;Name=YPTS_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06150;old_locus_tag=YPTS_1194 NC_010634.1 Protein Homology CDS 1341178 1341498 . - 0 ID=cds1173;Parent=gene1225;Dbxref=Genbank:WP_012413547.1;Name=WP_012413547.1;gbkey=CDS;product=toxin;protein_id=WP_012413547.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1341547 1343501 . + . ID=id100;gbkey=repeat_region NC_010634.1 RefSeq gene 1341614 1342393 . - . ID=gene1226;Name=YPTS_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06155;old_locus_tag=YPTS_1195 NC_010634.1 Protein Homology CDS 1341614 1342393 . - 0 ID=cds1174;Parent=gene1226;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_010634.1 RefSeq gene 1342393 1343415 . - . ID=gene1227;Name=YPTS_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06160;old_locus_tag=YPTS_1196 NC_010634.1 Protein Homology CDS 1342393 1343415 . - 0 ID=cds1175;Parent=gene1227;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_010634.1 RefSeq gene 1343501 1343818 . - . ID=gene1228;Name=YPTS_RS06165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS06165;old_locus_tag=YPTS_1197;partial=true;pseudo=true;start_range=.,1343501 NC_010634.1 Protein Homology CDS 1343501 1343818 . - 0 ID=cds1176;Parent=gene1228;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=antitoxin YeeU;pseudo=true;start_range=.,1343501;transl_table=11 NC_010634.1 RefSeq gene 1343831 1344301 . - . ID=gene1229;Name=YPTS_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06170;old_locus_tag=YPTS_1198 NC_010634.1 Protein Homology CDS 1343831 1344301 . - 0 ID=cds1177;Parent=gene1229;Dbxref=Genbank:WP_012413549.1;Name=WP_012413549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413549.1;transl_table=11 NC_010634.1 RefSeq gene 1344371 1345192 . - . ID=gene1230;Name=YPTS_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06175;old_locus_tag=YPTS_1199 NC_010634.1 Protein Homology CDS 1344371 1345192 . - 0 ID=cds1178;Parent=gene1230;Dbxref=Genbank:WP_012413550.1;Name=WP_012413550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413550.1;transl_table=11 NC_010634.1 RefSeq gene 1345459 1346295 . - . ID=gene1231;Name=YPTS_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06180;old_locus_tag=YPTS_1200 NC_010634.1 Protein Homology CDS 1345459 1346295 . - 0 ID=cds1179;Parent=gene1231;Dbxref=Genbank:WP_012413551.1;Name=WP_012413551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413551.1;transl_table=11 NC_010634.1 RefSeq gene 1346505 1346900 . - . ID=gene1232;Name=YPTS_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06185;old_locus_tag=YPTS_1201 NC_010634.1 Protein Homology CDS 1346505 1346900 . - 0 ID=cds1180;Parent=gene1232;Dbxref=Genbank:WP_012413552.1;Name=WP_012413552.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413552.1;transl_table=11 NC_010634.1 RefSeq gene 1347093 1347980 . - . ID=gene1233;Name=YPTS_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06190;old_locus_tag=YPTS_1202 NC_010634.1 Protein Homology CDS 1347093 1347980 . - 0 ID=cds1181;Parent=gene1233;Dbxref=Genbank:WP_012413553.1;Name=WP_012413553.1;gbkey=CDS;product=HSR1-like GTP-binding protein;protein_id=WP_012413553.1;transl_table=11 NC_010634.1 RefSeq gene 1348313 1349749 . + . ID=gene1234;Name=YPTS_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06195;old_locus_tag=YPTS_1203 NC_010634.1 Protein Homology CDS 1348313 1349749 . + 0 ID=cds1182;Parent=gene1234;Dbxref=Genbank:WP_012413554.1;Name=WP_012413554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413554.1;transl_table=11 NC_010634.1 RefSeq gene 1350228 1350812 . + . ID=gene1235;Name=YPTS_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06200;old_locus_tag=YPTS_1204 NC_010634.1 Protein Homology CDS 1350228 1350812 . + 0 ID=cds1183;Parent=gene1235;Dbxref=Genbank:WP_012413555.1;Name=WP_012413555.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413555.1;transl_table=11 NC_010634.1 RefSeq gene 1350879 1351604 . - . ID=gene1236;Name=YPTS_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06205;old_locus_tag=YPTS_1205 NC_010634.1 Protein Homology CDS 1350879 1351604 . - 0 ID=cds1184;Parent=gene1236;Dbxref=Genbank:WP_012413556.1;Name=WP_012413556.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413556.1;transl_table=11 NC_010634.1 RefSeq gene 1351719 1351946 . + . ID=gene1237;Name=YPTS_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06210;old_locus_tag=YPTS_1206 NC_010634.1 Protein Homology CDS 1351719 1351946 . + 0 ID=cds1185;Parent=gene1237;Dbxref=Genbank:WP_012413557.1;Name=WP_012413557.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413557.1;transl_table=11 NC_010634.1 RefSeq gene 1352524 1353303 . + . ID=gene1238;Name=YPTS_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06215;old_locus_tag=YPTS_1208 NC_010634.1 Protein Homology CDS 1352524 1353303 . + 0 ID=cds1186;Parent=gene1238;Dbxref=Genbank:WP_012413559.1;Name=WP_012413559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413559.1;transl_table=11 NC_010634.1 RefSeq gene 1353287 1353511 . + . ID=gene1239;Name=YPTS_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06220;old_locus_tag=YPTS_1209 NC_010634.1 Protein Homology CDS 1353287 1353511 . + 0 ID=cds1187;Parent=gene1239;Dbxref=Genbank:WP_012413560.1;Name=WP_012413560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413560.1;transl_table=11 NC_010634.1 RefSeq gene 1353501 1355120 . + . ID=gene1240;Name=YPTS_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06225;old_locus_tag=YPTS_1210 NC_010634.1 Protein Homology CDS 1353501 1355120 . + 0 ID=cds1188;Parent=gene1240;Dbxref=Genbank:WP_012413561.1;Name=WP_012413561.1;gbkey=CDS;product=chromosome segregation ATPase;protein_id=WP_012413561.1;transl_table=11 NC_010634.1 RefSeq gene 1355589 1356830 . - . ID=gene1241;Name=YPTS_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06230;old_locus_tag=YPTS_1211 NC_010634.1 Protein Homology CDS 1355589 1356830 . - 0 ID=cds1189;Parent=gene1241;Dbxref=Genbank:WP_012413562.1;Name=WP_012413562.1;gbkey=CDS;product=integrase;protein_id=WP_012413562.1;transl_table=11 NC_010634.1 RefSeq gene 1357445 1357927 . - . ID=gene1242;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YPTS_RS06235;old_locus_tag=YPTS_1212 NC_010634.1 Protein Homology CDS 1357445 1357927 . - 0 ID=cds1190;Parent=gene1242;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11 NC_010634.1 RefSeq gene 1358088 1358522 . + . ID=gene1243;Name=YPTS_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06240;old_locus_tag=YPTS_1213 NC_010634.1 Protein Homology CDS 1358088 1358522 . + 0 ID=cds1191;Parent=gene1243;Dbxref=Genbank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210715.1;transl_table=11 NC_010634.1 RefSeq gene 1358515 1358799 . + . ID=gene1244;Name=YPTS_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06245;old_locus_tag=YPTS_1214 NC_010634.1 Protein Homology CDS 1358515 1358799 . + 0 ID=cds1192;Parent=gene1244;Dbxref=Genbank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;product=protein RnfH;protein_id=WP_002210716.1;transl_table=11 NC_010634.1 RefSeq gene 1358949 1359290 . - . ID=gene1245;Name=YPTS_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06250;old_locus_tag=YPTS_1215 NC_010634.1 Protein Homology CDS 1358949 1359290 . - 0 ID=cds1193;Parent=gene1245;Dbxref=Genbank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_002210717.1;transl_table=11 NC_010634.1 RefSeq gene 1359404 1361065 . - . ID=gene1246;Name=YPTS_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06255;old_locus_tag=YPTS_1216 NC_010634.1 Protein Homology CDS 1359404 1361065 . - 0 ID=cds1194;Parent=gene1246;Dbxref=Genbank:WP_012413563.1;Name=WP_012413563.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_012413563.1;transl_table=11 NC_010634.1 RefSeq gene 1361152 1362033 . - . ID=gene1247;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=YPTS_RS06260;old_locus_tag=YPTS_1217 NC_010634.1 Protein Homology CDS 1361152 1362033 . - 0 ID=cds1195;Parent=gene1247;Dbxref=Genbank:WP_011191944.1;Name=WP_011191944.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_011191944.1;transl_table=11 NC_010634.1 RefSeq gene 1362157 1362735 . + . ID=gene1248;Name=YPTS_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06265;old_locus_tag=YPTS_1218 NC_010634.1 Protein Homology CDS 1362157 1362735 . + 0 ID=cds1196;Parent=gene1248;Dbxref=Genbank:WP_002224622.1;Name=WP_002224622.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002224622.1;transl_table=11 NC_010634.1 RefSeq gene 1362843 1364123 . - . ID=gene1249;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=YPTS_RS06270;old_locus_tag=YPTS_1219 NC_010634.1 Protein Homology CDS 1362843 1364123 . - 0 ID=cds1197;Parent=gene1249;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11 NC_010634.1 RefSeq gene 1364833 1365222 . + . ID=gene1250;Name=YPTS_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06275;old_locus_tag=YPTS_1220 NC_010634.1 Protein Homology CDS 1364833 1365222 . + 0 ID=cds1198;Parent=gene1250;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11 NC_010634.1 RefSeq gene 1365216 1365563 . + . ID=gene1251;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YPTS_RS06280;old_locus_tag=YPTS_1221 NC_010634.1 Protein Homology CDS 1365216 1365563 . + 0 ID=cds1199;Parent=gene1251;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11 NC_010634.1 RefSeq gene 1365564 1367330 . + . ID=gene1252;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YPTS_RS06285;old_locus_tag=YPTS_1222 NC_010634.1 Protein Homology CDS 1365564 1367330 . + 0 ID=cds1200;Parent=gene1252;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NC_010634.1 RefSeq gene 1367380 1368096 . + . ID=gene1253;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YPTS_RS06290;old_locus_tag=YPTS_1223 NC_010634.1 Protein Homology CDS 1367380 1368096 . + 0 ID=cds1201;Parent=gene1253;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NC_010634.1 RefSeq gene 1368452 1371259 . + . ID=gene1254;Name=YPTS_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06295;old_locus_tag=YPTS_1224 NC_010634.1 Protein Homology CDS 1368452 1371259 . + 0 ID=cds1202;Parent=gene1254;Dbxref=Genbank:WP_002210726.1;Name=WP_002210726.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=WP_002210726.1;transl_table=11 NC_010634.1 RefSeq gene 1371289 1372512 . + . ID=gene1255;Name=YPTS_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06300;old_locus_tag=YPTS_1225 NC_010634.1 Protein Homology CDS 1371289 1372512 . + 0 ID=cds1203;Parent=gene1255;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NC_010634.1 RefSeq gene 1372625 1373791 . + . ID=gene1256;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YPTS_RS06305;old_locus_tag=YPTS_1226 NC_010634.1 Protein Homology CDS 1372625 1373791 . + 0 ID=cds1204;Parent=gene1256;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NC_010634.1 RefSeq gene 1373791 1374663 . + . ID=gene1257;Name=YPTS_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06310;old_locus_tag=YPTS_1227 NC_010634.1 Protein Homology CDS 1373791 1374663 . + 0 ID=cds1205;Parent=gene1257;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NC_010634.1 RefSeq gene 1375431 1376999 . + . ID=gene1258;Name=YPTS_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06315;old_locus_tag=YPTS_1228 NC_010634.1 Protein Homology CDS 1375431 1376999 . + 0 ID=cds1206;Parent=gene1258;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NC_010634.1 RefSeq gene 1377014 1378153 . + . ID=gene1259;Name=YPTS_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06320;old_locus_tag=YPTS_1229 NC_010634.1 Protein Homology CDS 1377014 1378153 . + 0 ID=cds1207;Parent=gene1259;Dbxref=Genbank:WP_002210731.1;Name=WP_002210731.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NC_010634.1 RefSeq gene 1378166 1378300 . + . ID=gene1260;Name=YPTS_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06325;old_locus_tag=YPTS_1230 NC_010634.1 Protein Homology CDS 1378166 1378300 . + 0 ID=cds1208;Parent=gene1260;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11 NC_010634.1 RefSeq gene 1378290 1378577 . + . ID=gene1261;Name=YPTS_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06330;old_locus_tag=YPTS_1231 NC_010634.1 Protein Homology CDS 1378290 1378577 . + 0 ID=cds1209;Parent=gene1261;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11 NC_010634.1 RefSeq gene 1378709 1379110 . + . ID=gene1262;Name=YPTS_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06335;old_locus_tag=YPTS_1232 NC_010634.1 Protein Homology CDS 1378709 1379110 . + 0 ID=cds1210;Parent=gene1262;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11 NC_010634.1 RefSeq gene 1379110 1379796 . + . ID=gene1263;Name=YPTS_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06340;old_locus_tag=YPTS_1233 NC_010634.1 Protein Homology CDS 1379110 1379796 . + 0 ID=cds1211;Parent=gene1263;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11 NC_010634.1 RefSeq gene 1379809 1380237 . + . ID=gene1264;Name=YPTS_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06345;old_locus_tag=YPTS_1234 NC_010634.1 Protein Homology CDS 1379809 1380237 . + 0 ID=cds1212;Parent=gene1264;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11 NC_010634.1 RefSeq gene 1380349 1381509 . + . ID=gene1265;Name=YPTS_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06350;old_locus_tag=YPTS_1235 NC_010634.1 Protein Homology CDS 1380349 1381509 . + 0 ID=cds1213;Parent=gene1265;Dbxref=Genbank:WP_041175561.1;Name=WP_041175561.1;gbkey=CDS;product=protein TolA;protein_id=WP_041175561.1;transl_table=11 NC_010634.1 RefSeq gene 1381629 1382921 . + . ID=gene1266;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YPTS_RS06355;old_locus_tag=YPTS_1236 NC_010634.1 Protein Homology CDS 1381629 1382921 . + 0 ID=cds1214;Parent=gene1266;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11 NC_010634.1 RefSeq gene 1382972 1383478 . + . ID=gene1267;Name=YPTS_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06360;old_locus_tag=YPTS_1237 NC_010634.1 Protein Homology CDS 1382972 1383478 . + 0 ID=cds1215;Parent=gene1267;Dbxref=Genbank:WP_011191946.1;Name=WP_011191946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191946.1;transl_table=11 NC_010634.1 RefSeq gene 1383488 1384297 . + . ID=gene1268;Name=YPTS_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06365;old_locus_tag=YPTS_1238 NC_010634.1 Protein Homology CDS 1383488 1384297 . + 0 ID=cds1216;Parent=gene1268;Dbxref=Genbank:WP_002220051.1;Name=WP_002220051.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=WP_002220051.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1384488 1384957 . + . ID=id101;gbkey=repeat_region NC_010634.1 RefSeq gene 1384488 1384563 . + . ID=gene1269;Name=YPTS_RS06370;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06370;old_locus_tag=YPTS_R0029 NC_010634.1 tRNAscan-SE tRNA 1384488 1384563 . + . ID=rna49;Parent=gene1269;anticodon=(pos:1384521..1384523);gbkey=tRNA;product=tRNA-Lys NC_010634.1 tRNAscan-SE exon 1384488 1384563 . + . ID=id102;Parent=rna49;anticodon=(pos:1384521..1384523);gbkey=tRNA;product=tRNA-Lys NC_010634.1 RefSeq gene 1384591 1384666 . + . ID=gene1270;Name=YPTS_RS06375;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06375;old_locus_tag=YPTS_R0030 NC_010634.1 tRNAscan-SE tRNA 1384591 1384666 . + . ID=rna50;Parent=gene1270;anticodon=(pos:1384624..1384626);gbkey=tRNA;product=tRNA-Lys NC_010634.1 tRNAscan-SE exon 1384591 1384666 . + . ID=id103;Parent=rna50;anticodon=(pos:1384624..1384626);gbkey=tRNA;product=tRNA-Lys NC_010634.1 RefSeq gene 1384694 1384769 . + . ID=gene1271;Name=YPTS_RS06380;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06380;old_locus_tag=YPTS_R0031 NC_010634.1 tRNAscan-SE tRNA 1384694 1384769 . + . ID=rna51;Parent=gene1271;anticodon=(pos:1384727..1384729);gbkey=tRNA;product=tRNA-Lys NC_010634.1 tRNAscan-SE exon 1384694 1384769 . + . ID=id104;Parent=rna51;anticodon=(pos:1384727..1384729);gbkey=tRNA;product=tRNA-Lys NC_010634.1 RefSeq gene 1384797 1384872 . + . ID=gene1272;Name=YPTS_RS06385;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06385;old_locus_tag=YPTS_R0032 NC_010634.1 tRNAscan-SE tRNA 1384797 1384872 . + . ID=rna52;Parent=gene1272;anticodon=(pos:1384830..1384832);gbkey=tRNA;product=tRNA-Lys NC_010634.1 tRNAscan-SE exon 1384797 1384872 . + . ID=id105;Parent=rna52;anticodon=(pos:1384830..1384832);gbkey=tRNA;product=tRNA-Lys NC_010634.1 RefSeq gene 1384901 1384970 . + . ID=gene1273;Name=YPTS_RS06390;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06390;old_locus_tag=YPTS_R0033 NC_010634.1 tRNAscan-SE tRNA 1384901 1384970 . + . ID=rna53;Parent=gene1273;anticodon=(pos:1384933..1384935);gbkey=tRNA;product=tRNA-Lys NC_010634.1 tRNAscan-SE exon 1384901 1384970 . + . ID=id106;Parent=rna53;anticodon=(pos:1384933..1384935);gbkey=tRNA;product=tRNA-Lys NC_010634.1 RefSeq gene 1385020 1385262 . - . ID=gene1274;Name=YPTS_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06395 NC_010634.1 Protein Homology CDS 1385020 1385262 . - 0 ID=cds1217;Parent=gene1274;Dbxref=Genbank:WP_032467087.1;Name=WP_032467087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467087.1;transl_table=11 NC_010634.1 RefSeq gene 1385339 1386400 . + . ID=gene1275;Name=YPTS_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06400;old_locus_tag=YPTS_1239 NC_010634.1 Protein Homology CDS 1385339 1386400 . + 0 ID=cds1218;Parent=gene1275;Dbxref=Genbank:WP_002210741.1;Name=WP_002210741.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002210741.1;transl_table=11 NC_010634.1 RefSeq gene 1386522 1387247 . + . ID=gene1276;Name=YPTS_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06405;old_locus_tag=YPTS_1240 NC_010634.1 Protein Homology CDS 1386522 1387247 . + 0 ID=cds1219;Parent=gene1276;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NC_010634.1 RefSeq gene 1387362 1388300 . - . ID=gene1277;Name=YPTS_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06410;old_locus_tag=YPTS_1241 NC_010634.1 Protein Homology CDS 1387362 1388300 . - 0 ID=cds1220;Parent=gene1277;Dbxref=Genbank:WP_012413566.1;Name=WP_012413566.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_012413566.1;transl_table=11 NC_010634.1 RefSeq gene 1388767 1389819 . + . ID=gene1278;Name=YPTS_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06415;old_locus_tag=YPTS_1243 NC_010634.1 Protein Homology CDS 1388767 1389819 . + 0 ID=cds1221;Parent=gene1278;Dbxref=Genbank:WP_002223549.1;Name=WP_002223549.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002223549.1;transl_table=11 NC_010634.1 RefSeq gene 1390001 1390753 . - . ID=gene1279;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YPTS_RS06420;old_locus_tag=YPTS_1244 NC_010634.1 Protein Homology CDS 1390001 1390753 . - 0 ID=cds1222;Parent=gene1279;Dbxref=Genbank:WP_002210746.1;Name=WP_002210746.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NC_010634.1 RefSeq gene 1391100 1391435 . - . ID=gene1280;Name=YPTS_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06425;old_locus_tag=YPTS_1245 NC_010634.1 Protein Homology CDS 1391100 1391435 . - 0 ID=cds1223;Parent=gene1280;Dbxref=Genbank:WP_011191948.1;Name=WP_011191948.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_011191948.1;transl_table=11 NC_010634.1 RefSeq gene 1391728 1392798 . - . ID=gene1281;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YPTS_RS06430;old_locus_tag=YPTS_1246 NC_010634.1 Protein Homology CDS 1391728 1392798 . - 0 ID=cds1224;Parent=gene1281;Dbxref=Genbank:WP_011191949.1;Name=WP_011191949.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_011191949.1;transl_table=11 NC_010634.1 RefSeq gene 1392792 1393943 . - . ID=gene1282;Name=YPTS_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06435;old_locus_tag=YPTS_1247 NC_010634.1 Protein Homology CDS 1392792 1393943 . - 0 ID=cds1225;Parent=gene1282;Dbxref=Genbank:WP_011191950.1;Name=WP_011191950.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_011191950.1;transl_table=11 NC_010634.1 RefSeq gene 1393940 1394992 . - . ID=gene1283;Name=YPTS_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06440;old_locus_tag=YPTS_1248 NC_010634.1 Protein Homology CDS 1393940 1394992 . - 0 ID=cds1226;Parent=gene1283;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NC_010634.1 RefSeq gene 1395002 1396018 . - . ID=gene1284;Name=YPTS_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06445;old_locus_tag=YPTS_1249 NC_010634.1 Protein Homology CDS 1395002 1396018 . - 0 ID=cds1227;Parent=gene1284;Dbxref=Genbank:WP_011191951.1;Name=WP_011191951.1;gbkey=CDS;product=UDP-galactose-4-epimerase;protein_id=WP_011191951.1;transl_table=11 NC_010634.1 RefSeq gene 1396378 1397196 . - . ID=gene1285;Name=YPTS_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06450;old_locus_tag=YPTS_1250 NC_010634.1 Protein Homology CDS 1396378 1397196 . - 0 ID=cds1228;Parent=gene1285;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11 NC_010634.1 RefSeq gene 1397251 1397379 . - . ID=gene1286;Name=YPTS_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06455;old_locus_tag=YPTS_1251 NC_010634.1 Protein Homology CDS 1397251 1397379 . - 0 ID=cds1229;Parent=gene1286;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11 NC_010634.1 RefSeq gene 1397413 1398903 . - . ID=gene1287;Name=YPTS_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06460;old_locus_tag=YPTS_1252 NC_010634.1 Protein Homology CDS 1397413 1398903 . - 0 ID=cds1230;Parent=gene1287;Dbxref=Genbank:WP_011191952.1;Name=WP_011191952.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_011191952.1;transl_table=11 NC_010634.1 RefSeq gene 1399013 1399804 . - . ID=gene1288;Name=YPTS_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06465;old_locus_tag=YPTS_1253 NC_010634.1 Protein Homology CDS 1399013 1399804 . - 0 ID=cds1231;Parent=gene1288;Dbxref=Genbank:WP_002210754.1;Name=WP_002210754.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_002210754.1;transl_table=11 NC_010634.1 RefSeq gene 1400055 1400207 . + . ID=gene1289;Name=YPTS_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06470;old_locus_tag=YPTS_1254 NC_010634.1 Protein Homology CDS 1400055 1400207 . + 0 ID=cds1232;Parent=gene1289;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11 NC_010634.1 RefSeq gene 1400442 1401221 . + . ID=gene1290;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YPTS_RS06475;old_locus_tag=YPTS_1255 NC_010634.1 Protein Homology CDS 1400442 1401221 . + 0 ID=cds1233;Parent=gene1290;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NC_010634.1 RefSeq gene 1401221 1401916 . + . ID=gene1291;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YPTS_RS06480;old_locus_tag=YPTS_1256 NC_010634.1 Protein Homology CDS 1401221 1401916 . + 0 ID=cds1234;Parent=gene1291;Dbxref=Genbank:WP_002210757.1;Name=WP_002210757.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_002210757.1;transl_table=11 NC_010634.1 RefSeq gene 1401910 1402989 . + . ID=gene1292;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YPTS_RS06485;old_locus_tag=YPTS_1257 NC_010634.1 Protein Homology CDS 1401910 1402989 . + 0 ID=cds1235;Parent=gene1292;Dbxref=Genbank:WP_011191953.1;Name=WP_011191953.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_011191953.1;transl_table=11 NC_010634.1 RefSeq gene 1403045 1403866 . - . ID=gene1293;Name=YPTS_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06490;old_locus_tag=YPTS_1258 NC_010634.1 Protein Homology CDS 1403045 1403866 . - 0 ID=cds1236;Parent=gene1293;Dbxref=Genbank:WP_011191954.1;Name=WP_011191954.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_011191954.1;transl_table=11 NC_010634.1 RefSeq gene 1404157 1405161 . + . ID=gene1294;Name=YPTS_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06495;old_locus_tag=YPTS_1259 NC_010634.1 Protein Homology CDS 1404157 1405161 . + 0 ID=cds1237;Parent=gene1294;Dbxref=Genbank:WP_011191955.1;Name=WP_011191955.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_011191955.1;transl_table=11 NC_010634.1 RefSeq gene 1405346 1406626 . - . ID=gene1295;Name=YPTS_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06500;old_locus_tag=YPTS_1260 NC_010634.1 Protein Homology CDS 1405346 1406626 . - 0 ID=cds1238;Parent=gene1295;Dbxref=Genbank:WP_002220188.1;Name=WP_002220188.1;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_002220188.1;transl_table=11 NC_010634.1 RefSeq gene 1406725 1407762 . + . ID=gene1296;Name=YPTS_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06505;old_locus_tag=YPTS_1261 NC_010634.1 Protein Homology CDS 1406725 1407762 . + 0 ID=cds1239;Parent=gene1296;Dbxref=Genbank:WP_002210762.1;Name=WP_002210762.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_002210762.1;transl_table=11 NC_010634.1 RefSeq gene 1407762 1408913 . + . ID=gene1297;Name=YPTS_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06510;old_locus_tag=YPTS_1262 NC_010634.1 Protein Homology CDS 1407762 1408913 . + 0 ID=cds1240;Parent=gene1297;Dbxref=Genbank:WP_011191957.1;Name=WP_011191957.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_011191957.1;transl_table=11 NC_010634.1 RefSeq gene 1408897 1409700 . + . ID=gene1298;Name=YPTS_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06515;old_locus_tag=YPTS_1263 NC_010634.1 Protein Homology CDS 1408897 1409700 . + 0 ID=cds1241;Parent=gene1298;Dbxref=Genbank:WP_011191958.1;Name=WP_011191958.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_011191958.1;transl_table=11 NC_010634.1 RefSeq gene 1409693 1410415 . + . ID=gene1299;Name=YPTS_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06520;old_locus_tag=YPTS_1264 NC_010634.1 Protein Homology CDS 1409693 1410415 . + 0 ID=cds1242;Parent=gene1299;Dbxref=Genbank:WP_002216554.1;Name=WP_002216554.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002216554.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1410490 1410616 . + . ID=id107;gbkey=repeat_region NC_010634.1 RefSeq gene 1410643 1411353 . - . ID=gene1300;Name=YPTS_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06525;old_locus_tag=YPTS_1265 NC_010634.1 Protein Homology CDS 1410643 1411353 . - 0 ID=cds1243;Parent=gene1300;Dbxref=Genbank:WP_002210766.1;Name=WP_002210766.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210766.1;transl_table=11 NC_010634.1 RefSeq gene 1412444 1414459 . + . ID=gene1301;Name=YPTS_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06530;old_locus_tag=YPTS_1266 NC_010634.1 Protein Homology CDS 1412444 1414459 . + 0 ID=cds1244;Parent=gene1301;Dbxref=Genbank:WP_011191959.1;Name=WP_011191959.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_011191959.1;transl_table=11 NC_010634.1 RefSeq gene 1414770 1415015 . + . ID=gene1302;Name=YPTS_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06535;old_locus_tag=YPTS_1267 NC_010634.1 Protein Homology CDS 1414770 1415015 . + 0 ID=cds1245;Parent=gene1302;Dbxref=Genbank:WP_002210768.1;Name=WP_002210768.1;gbkey=CDS;product=transporter;protein_id=WP_002210768.1;transl_table=11 NC_010634.1 RefSeq gene 1415146 1416069 . - . ID=gene1303;Name=YPTS_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06540;old_locus_tag=YPTS_1268 NC_010634.1 Protein Homology CDS 1415146 1416069 . - 0 ID=cds1246;Parent=gene1303;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11 NC_010634.1 RefSeq gene 1416203 1416349 . - . ID=gene1304;Name=YPTS_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06545;old_locus_tag=YPTS_1269 NC_010634.1 Protein Homology CDS 1416203 1416349 . - 0 ID=cds1247;Parent=gene1304;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11 NC_010634.1 RefSeq gene 1416601 1417581 . + . ID=gene1305;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YPTS_RS06550;old_locus_tag=YPTS_1270 NC_010634.1 Protein Homology CDS 1416601 1417581 . + 0 ID=cds1248;Parent=gene1305;Dbxref=Genbank:WP_002210771.1;Name=WP_002210771.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_002210771.1;transl_table=11 NC_010634.1 RefSeq gene 1417804 1418283 . + . ID=gene1306;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YPTS_RS06555;old_locus_tag=YPTS_1271 NC_010634.1 Protein Homology CDS 1417804 1418283 . + 0 ID=cds1249;Parent=gene1306;Dbxref=Genbank:WP_011191960.1;Name=WP_011191960.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_011191960.1;transl_table=11 NC_010634.1 RefSeq gene 1418280 1418525 . + . ID=gene1307;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YPTS_RS06560;old_locus_tag=YPTS_1272 NC_010634.1 Protein Homology CDS 1418280 1418525 . + 0 ID=cds1250;Parent=gene1307;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11 NC_010634.1 RefSeq gene 1418528 1418980 . + . ID=gene1308;Name=YPTS_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06565;old_locus_tag=YPTS_1273 NC_010634.1 Protein Homology CDS 1418528 1418980 . + 0 ID=cds1251;Parent=gene1308;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11 NC_010634.1 RefSeq gene 1419123 1419833 . + . ID=gene1309;Name=YPTS_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06570;old_locus_tag=YPTS_1274 NC_010634.1 Protein Homology CDS 1419123 1419833 . + 0 ID=cds1252;Parent=gene1309;Dbxref=Genbank:WP_011191961.1;Name=WP_011191961.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191961.1;transl_table=11 NC_010634.1 RefSeq gene 1420044 1421747 . - . ID=gene1310;Name=YPTS_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06575;old_locus_tag=YPTS_1275 NC_010634.1 Protein Homology CDS 1420044 1421747 . - 0 ID=cds1253;Parent=gene1310;Dbxref=Genbank:WP_011191962.1;Name=WP_011191962.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=oxygen-dependent choline dehydrogenase;protein_id=WP_011191962.1;transl_table=11 NC_010634.1 RefSeq gene 1421770 1423242 . - . ID=gene1311;Name=YPTS_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06580;old_locus_tag=YPTS_1276 NC_010634.1 Protein Homology CDS 1421770 1423242 . - 0 ID=cds1254;Parent=gene1311;Dbxref=Genbank:WP_012413568.1;Name=WP_012413568.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_012413568.1;transl_table=11 NC_010634.1 RefSeq gene 1423300 1423896 . - . ID=gene1312;Name=YPTS_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06585;old_locus_tag=YPTS_1277 NC_010634.1 Protein Homology CDS 1423300 1423896 . - 0 ID=cds1255;Parent=gene1312;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11 NC_010634.1 RefSeq gene 1424262 1426310 . + . ID=gene1313;Name=YPTS_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06590;old_locus_tag=YPTS_1278 NC_010634.1 Protein Homology CDS 1424262 1426310 . + 0 ID=cds1256;Parent=gene1313;Dbxref=Genbank:WP_012413569.1;Name=WP_012413569.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_012413569.1;transl_table=11 NC_010634.1 RefSeq gene 1426542 1427435 . + . ID=gene1314;Name=YPTS_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06595;old_locus_tag=YPTS_1279 NC_010634.1 Protein Homology CDS 1426542 1427435 . + 0 ID=cds1257;Parent=gene1314;Dbxref=Genbank:WP_002214199.1;Name=WP_002214199.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214199.1;transl_table=11 NC_010634.1 RefSeq gene 1427473 1428321 . - . ID=gene1315;Name=YPTS_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06600;old_locus_tag=YPTS_1280 NC_010634.1 Protein Homology CDS 1427473 1428321 . - 0 ID=cds1258;Parent=gene1315;Dbxref=Genbank:WP_032466158.1;Name=WP_032466158.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_032466158.1;transl_table=11 NC_010634.1 RefSeq gene 1428667 1429530 . + . ID=gene1316;Name=YPTS_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06605;old_locus_tag=YPTS_1281 NC_010634.1 Protein Homology CDS 1428667 1429530 . + 0 ID=cds1259;Parent=gene1316;Dbxref=Genbank:WP_011191966.1;Name=WP_011191966.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_011191966.1;transl_table=11 NC_010634.1 RefSeq gene 1429669 1430925 . + . ID=gene1317;Name=YPTS_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06610;old_locus_tag=YPTS_1282 NC_010634.1 Protein Homology CDS 1429669 1430925 . + 0 ID=cds1260;Parent=gene1317;Dbxref=Genbank:WP_011191967.1;Name=WP_011191967.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_011191967.1;transl_table=11 NC_010634.1 RefSeq gene 1431013 1431486 . - . ID=gene1318;Name=YPTS_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06615;old_locus_tag=YPTS_1283 NC_010634.1 Protein Homology CDS 1431013 1431486 . - 0 ID=cds1261;Parent=gene1318;Dbxref=Genbank:WP_002220173.1;Name=WP_002220173.1;gbkey=CDS;product=zinc resistance protein;protein_id=WP_002220173.1;transl_table=11 NC_010634.1 RefSeq gene 1431844 1433658 . + . ID=gene1319;Name=YPTS_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06620;old_locus_tag=YPTS_1284 NC_010634.1 Protein Homology CDS 1431844 1433658 . + 0 ID=cds1262;Parent=gene1319;Dbxref=Genbank:WP_012413571.1;Name=WP_012413571.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_012413571.1;transl_table=11 NC_010634.1 RefSeq gene 1433645 1435009 . + . ID=gene1320;Name=YPTS_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06625;old_locus_tag=YPTS_1285 NC_010634.1 Protein Homology CDS 1433645 1435009 . + 0 ID=cds1263;Parent=gene1320;Dbxref=Genbank:WP_012304367.1;Name=WP_012304367.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_012304367.1;transl_table=11 NC_010634.1 RefSeq gene 1435357 1436466 . + . ID=gene1321;Name=YPTS_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06630;old_locus_tag=YPTS_1286 NC_010634.1 Protein Homology CDS 1435357 1436466 . + 0 ID=cds1264;Parent=gene1321;Dbxref=Genbank:WP_012105466.1;Name=WP_012105466.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_012105466.1;transl_table=11 NC_010634.1 RefSeq gene 1436467 1437378 . - . ID=gene1322;Name=YPTS_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06635;old_locus_tag=YPTS_1287 NC_010634.1 Protein Homology CDS 1436467 1437378 . - 0 ID=cds1265;Parent=gene1322;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11 NC_010634.1 RefSeq gene 1437710 1437937 . + . ID=gene1323;Name=YPTS_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06640 NC_010634.1 Protein Homology CDS 1437710 1437937 . + 0 ID=cds1266;Parent=gene1323;Dbxref=Genbank:WP_002220165.1;Name=WP_002220165.1;gbkey=CDS;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_002220165.1;transl_table=11 NC_010634.1 RefSeq gene 1437948 1438274 . + . ID=gene1324;Name=YPTS_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06645;old_locus_tag=YPTS_1288 NC_010634.1 Protein Homology CDS 1437948 1438274 . + 0 ID=cds1267;Parent=gene1324;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11 NC_010634.1 RefSeq gene 1438313 1439419 . - . ID=gene1325;Name=YPTS_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06650;old_locus_tag=YPTS_1289 NC_010634.1 Protein Homology CDS 1438313 1439419 . - 0 ID=cds1268;Parent=gene1325;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11 NC_010634.1 RefSeq gene 1439432 1440607 . - . ID=gene1326;Name=YPTS_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06655;old_locus_tag=YPTS_1290 NC_010634.1 Protein Homology CDS 1439432 1440607 . - 0 ID=cds1269;Parent=gene1326;Dbxref=Genbank:WP_002230687.1;Name=WP_002230687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230687.1;transl_table=11 NC_010634.1 RefSeq gene 1440612 1442354 . - . ID=gene1327;Name=YPTS_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06660;old_locus_tag=YPTS_1291 NC_010634.1 Protein Homology CDS 1440612 1442354 . - 0 ID=cds1270;Parent=gene1327;Dbxref=Genbank:WP_011191972.1;Name=WP_011191972.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191972.1;transl_table=11 NC_010634.1 RefSeq gene 1442368 1443354 . - . ID=gene1328;Name=YPTS_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06665;old_locus_tag=YPTS_1292 NC_010634.1 Protein Homology CDS 1442368 1443354 . - 0 ID=cds1271;Parent=gene1328;Dbxref=Genbank:WP_011191973.1;Name=WP_011191973.1;gbkey=CDS;product=transporter;protein_id=WP_011191973.1;transl_table=11 NC_010634.1 RefSeq gene 1443406 1444116 . - . ID=gene1329;Name=YPTS_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06670;old_locus_tag=YPTS_1293 NC_010634.1 Protein Homology CDS 1443406 1444116 . - 0 ID=cds1272;Parent=gene1329;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NC_010634.1 RefSeq gene 1444507 1445862 . + . ID=gene1330;Name=YPTS_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06675;old_locus_tag=YPTS_1294 NC_010634.1 Protein Homology CDS 1444507 1445862 . + 0 ID=cds1273;Parent=gene1330;Dbxref=Genbank:WP_002220152.1;Name=WP_002220152.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_002220152.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1445919 1446067 . + . ID=id108;gbkey=repeat_region NC_010634.1 RefSeq gene 1445992 1446258 . + . ID=gene1331;Name=YPTS_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06680;old_locus_tag=YPTS_1295 NC_010634.1 Protein Homology CDS 1445992 1446258 . + 0 ID=cds1274;Parent=gene1331;Dbxref=Genbank:WP_002228622.1;Name=WP_002228622.1;gbkey=CDS;product=transposase;protein_id=WP_002228622.1;transl_table=11 NC_010634.1 RefSeq gene 1447076 1447288 . + . ID=gene1332;Name=YPTS_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21615;old_locus_tag=YPTS_1297 NC_010634.1 Protein Homology CDS 1447076 1447288 . + 0 ID=cds1275;Parent=gene1332;Dbxref=Genbank:WP_042592913.1;Name=WP_042592913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592913.1;transl_table=11 NC_010634.1 RefSeq gene 1447322 1447678 . + . ID=gene1333;Name=YPTS_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21620;old_locus_tag=YPTS_1298 NC_010634.1 Protein Homology CDS 1447322 1447678 . + 0 ID=cds1276;Parent=gene1333;Dbxref=Genbank:WP_012413574.1;Name=WP_012413574.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413574.1;transl_table=11 NC_010634.1 RefSeq gene 1447819 1448055 . + . ID=gene1334;Name=YPTS_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21625;old_locus_tag=YPTS_1299 NC_010634.1 Protein Homology CDS 1447819 1448055 . + 0 ID=cds1277;Parent=gene1334;Dbxref=Genbank:WP_048901700.1;Name=WP_048901700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_048901700.1;transl_table=11 NC_010634.1 RefSeq gene 1448139 1448453 . + . ID=gene1335;Name=YPTS_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06690 NC_010634.1 Protein Homology CDS 1448139 1448453 . + 0 ID=cds1278;Parent=gene1335;Dbxref=Genbank:WP_012304359.1;Name=WP_012304359.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304359.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1448483 1448631 . + . ID=id109;gbkey=repeat_region NC_010634.1 RefSeq gene 1448714 1449179 . + . ID=gene1336;Name=YPTS_RS06695;end_range=1449179,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS06695;old_locus_tag=YPTS_1302;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 1448714 1449179 . + 0 ID=cds1279;Parent=gene1336;end_range=1449179,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1449576 1450514 . + . ID=gene1337;Name=YPTS_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06700;old_locus_tag=YPTS_1303 NC_010634.1 Protein Homology CDS 1449576 1450514 . + 0 ID=cds1280;Parent=gene1337;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11 NC_010634.1 RefSeq gene 1450588 1450767 . - . ID=gene1338;Name=YPTS_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06705;old_locus_tag=YPTS_1304 NC_010634.1 Protein Homology CDS 1450588 1450767 . - 0 ID=cds1281;Parent=gene1338;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11 NC_010634.1 RefSeq gene 1451107 1452042 . + . ID=gene1339;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YPTS_RS06710;old_locus_tag=YPTS_1305 NC_010634.1 Protein Homology CDS 1451107 1452042 . + 0 ID=cds1282;Parent=gene1339;Dbxref=Genbank:WP_002210780.1;Name=WP_002210780.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_002210780.1;transl_table=11 NC_010634.1 RefSeq gene 1452163 1453875 . - . ID=gene1340;Name=YPTS_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06715;old_locus_tag=YPTS_1306 NC_010634.1 Protein Homology CDS 1452163 1453875 . - 0 ID=cds1283;Parent=gene1340;Dbxref=Genbank:WP_002210781.1;Name=WP_002210781.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210781.1;transl_table=11 NC_010634.1 RefSeq gene 1454085 1454624 . + . ID=gene1341;Name=YPTS_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06720;old_locus_tag=YPTS_1307 NC_010634.1 Protein Homology CDS 1454085 1454624 . + 0 ID=cds1284;Parent=gene1341;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NC_010634.1 RefSeq gene 1454650 1454991 . - . ID=gene1342;Name=YPTS_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06725;old_locus_tag=YPTS_1308 NC_010634.1 Protein Homology CDS 1454650 1454991 . - 0 ID=cds1285;Parent=gene1342;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11 NC_010634.1 RefSeq gene 1455304 1456407 . + . ID=gene1343;Name=YPTS_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06730;old_locus_tag=YPTS_1309 NC_010634.1 Protein Homology CDS 1455304 1456407 . + 0 ID=cds1286;Parent=gene1343;Dbxref=Genbank:WP_011191976.1;Name=WP_011191976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191976.1;transl_table=11 NC_010634.1 RefSeq gene 1456592 1456840 . + . ID=gene1344;Name=YPTS_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06735;old_locus_tag=YPTS_1310 NC_010634.1 Protein Homology CDS 1456592 1456840 . + 0 ID=cds1287;Parent=gene1344;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11 NC_010634.1 RefSeq gene 1457048 1457884 . + . ID=gene1345;Name=YPTS_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06740;old_locus_tag=YPTS_1311 NC_010634.1 Protein Homology CDS 1457048 1457884 . + 0 ID=cds1288;Parent=gene1345;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11 NC_010634.1 RefSeq gene 1457921 1458850 . + . ID=gene1346;Name=YPTS_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06745;old_locus_tag=YPTS_1312 NC_010634.1 Protein Homology CDS 1457921 1458850 . + 0 ID=cds1289;Parent=gene1346;Dbxref=Genbank:WP_011191977.1;Name=WP_011191977.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_011191977.1;transl_table=11 NC_010634.1 RefSeq gene 1458954 1459814 . + . ID=gene1347;Name=YPTS_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06750;old_locus_tag=YPTS_1313 NC_010634.1 Protein Homology CDS 1458954 1459814 . + 0 ID=cds1290;Parent=gene1347;Dbxref=Genbank:WP_002210789.1;Name=WP_002210789.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210789.1;transl_table=11 NC_010634.1 RefSeq gene 1459817 1460698 . + . ID=gene1348;Name=YPTS_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06755;old_locus_tag=YPTS_1314 NC_010634.1 Protein Homology CDS 1459817 1460698 . + 0 ID=cds1291;Parent=gene1348;Dbxref=Genbank:WP_002210790.1;Name=WP_002210790.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210790.1;transl_table=11 NC_010634.1 RefSeq gene 1460943 1461416 . + . ID=gene1349;Name=YPTS_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06760;old_locus_tag=YPTS_1315 NC_010634.1 Protein Homology CDS 1460943 1461416 . + 0 ID=cds1292;Parent=gene1349;Dbxref=Genbank:WP_011191978.1;Name=WP_011191978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191978.1;transl_table=11 NC_010634.1 RefSeq gene 1461900 1463168 . + . ID=gene1350;Name=YPTS_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06765;old_locus_tag=YPTS_1316 NC_010634.1 Protein Homology CDS 1461900 1463168 . + 0 ID=cds1293;Parent=gene1350;Dbxref=Genbank:WP_002210792.1;Name=WP_002210792.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11 NC_010634.1 RefSeq gene 1463292 1464893 . + . ID=gene1351;Name=YPTS_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06770;old_locus_tag=YPTS_1317 NC_010634.1 Protein Homology CDS 1463292 1464893 . + 0 ID=cds1294;Parent=gene1351;Dbxref=Genbank:WP_002210793.1;Name=WP_002210793.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_002210793.1;transl_table=11 NC_010634.1 RefSeq gene 1464893 1465969 . + . ID=gene1352;Name=YPTS_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06775;old_locus_tag=YPTS_1318 NC_010634.1 Protein Homology CDS 1464893 1465969 . + 0 ID=cds1295;Parent=gene1352;Dbxref=Genbank:WP_002210794.1;Name=WP_002210794.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002210794.1;transl_table=11 NC_010634.1 RefSeq gene 1465966 1466802 . + . ID=gene1353;Name=YPTS_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06780;old_locus_tag=YPTS_1319 NC_010634.1 Protein Homology CDS 1465966 1466802 . + 0 ID=cds1296;Parent=gene1353;Dbxref=Genbank:WP_011191979.1;Name=WP_011191979.1;gbkey=CDS;product=urea ABC transporter ATP-binding protein;protein_id=WP_011191979.1;transl_table=11 NC_010634.1 RefSeq gene 1466896 1467594 . + . ID=gene1354;Name=YPTS_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06785;old_locus_tag=YPTS_1320 NC_010634.1 Protein Homology CDS 1466896 1467594 . + 0 ID=cds1297;Parent=gene1354;Dbxref=Genbank:WP_011191980.1;Name=WP_011191980.1;gbkey=CDS;product=urea ABC transporter ATP-binding protein;protein_id=WP_011191980.1;transl_table=11 NC_010634.1 RefSeq gene 1467709 1468566 . + . ID=gene1355;Name=YPTS_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06790;old_locus_tag=YPTS_1321 NC_010634.1 Protein Homology CDS 1467709 1468566 . + 0 ID=cds1298;Parent=gene1355;Dbxref=Genbank:WP_011191981.1;Name=WP_011191981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191981.1;transl_table=11 NC_010634.1 RefSeq gene 1468590 1470005 . + . ID=gene1356;Name=YPTS_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06795;old_locus_tag=YPTS_1322 NC_010634.1 Protein Homology CDS 1468590 1470005 . + 0 ID=cds1299;Parent=gene1356;Dbxref=Genbank:WP_012413579.1;Name=WP_012413579.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_012413579.1;transl_table=11 NC_010634.1 RefSeq gene 1470258 1471112 . - . ID=gene1357;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YPTS_RS06800;old_locus_tag=YPTS_1323 NC_010634.1 Protein Homology CDS 1470258 1471112 . - 0 ID=cds1300;Parent=gene1357;Dbxref=Genbank:WP_011191983.1;Name=WP_011191983.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_011191983.1;transl_table=11 NC_010634.1 RefSeq gene 1471848 1472780 . + . ID=gene1358;Name=YPTS_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06805;old_locus_tag=YPTS_1324 NC_010634.1 Protein Homology CDS 1471848 1472780 . + 0 ID=cds1301;Parent=gene1358;Dbxref=Genbank:WP_011191984.1;Name=WP_011191984.1;gbkey=CDS;product=osmoprotectant uptake system substrate-binding protein;protein_id=WP_011191984.1;transl_table=11 NC_010634.1 RefSeq gene 1473041 1474195 . + . ID=gene1359;Name=YPTS_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06810;old_locus_tag=YPTS_1325 NC_010634.1 Protein Homology CDS 1473041 1474195 . + 0 ID=cds1302;Parent=gene1359;Dbxref=Genbank:WP_002210801.1;Name=WP_002210801.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210801.1;transl_table=11 NC_010634.1 RefSeq gene 1474192 1475130 . + . ID=gene1360;Name=YPTS_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06815;old_locus_tag=YPTS_1326 NC_010634.1 Protein Homology CDS 1474192 1475130 . + 0 ID=cds1303;Parent=gene1360;Dbxref=Genbank:WP_011191985.1;Name=WP_011191985.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_011191985.1;transl_table=11 NC_010634.1 RefSeq gene 1475127 1475963 . + . ID=gene1361;Name=YPTS_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06820;old_locus_tag=YPTS_1327 NC_010634.1 Protein Homology CDS 1475127 1475963 . + 0 ID=cds1304;Parent=gene1361;Dbxref=Genbank:WP_002210803.1;Name=WP_002210803.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210803.1;transl_table=11 NC_010634.1 RefSeq gene 1476417 1477751 . + . ID=gene1362;Name=YPTS_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06825;old_locus_tag=YPTS_1328 NC_010634.1 Protein Homology CDS 1476417 1477751 . + 0 ID=cds1305;Parent=gene1362;Dbxref=Genbank:WP_011191986.1;Name=WP_011191986.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_011191986.1;transl_table=11 NC_010634.1 RefSeq gene 1477821 1480127 . + . ID=gene1363;Name=YPTS_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06830;old_locus_tag=YPTS_1329 NC_010634.1 Protein Homology CDS 1477821 1480127 . + 0 ID=cds1306;Parent=gene1363;Dbxref=Genbank:WP_011191987.1;Name=WP_011191987.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_011191987.1;transl_table=11 NC_010634.1 RefSeq gene 1480245 1480463 . - . ID=gene1364;Name=YPTS_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06835;old_locus_tag=YPTS_1330 NC_010634.1 Protein Homology CDS 1480245 1480463 . - 0 ID=cds1307;Parent=gene1364;Dbxref=Genbank:WP_011191988.1;Name=WP_011191988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191988.1;transl_table=11 NC_010634.1 RefSeq gene 1480588 1481478 . - . ID=gene1365;Name=YPTS_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06840;old_locus_tag=YPTS_1331 NC_010634.1 Protein Homology CDS 1480588 1481478 . - 0 ID=cds1308;Parent=gene1365;Dbxref=Genbank:WP_011191989.1;Name=WP_011191989.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_011191989.1;transl_table=11 NC_010634.1 RefSeq gene 1481890 1483005 . - . ID=gene1366;Name=YPTS_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06845;old_locus_tag=YPTS_1332 NC_010634.1 Protein Homology CDS 1481890 1483005 . - 0 ID=cds1309;Parent=gene1366;Dbxref=Genbank:WP_012413580.1;Name=WP_012413580.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_012413580.1;transl_table=11 NC_010634.1 RefSeq gene 1483275 1485455 . + . ID=gene1367;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YPTS_RS06850;old_locus_tag=YPTS_1333 NC_010634.1 Protein Homology CDS 1483275 1485455 . + 0 ID=cds1310;Parent=gene1367;Dbxref=Genbank:WP_011191991.1;Name=WP_011191991.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_011191991.1;transl_table=11 NC_010634.1 RefSeq gene 1485523 1486965 . - . ID=gene1368;Name=YPTS_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06855;old_locus_tag=YPTS_1334 NC_010634.1 Protein Homology CDS 1485523 1486965 . - 0 ID=cds1311;Parent=gene1368;Dbxref=Genbank:WP_002228030.1;Name=WP_002228030.1;gbkey=CDS;product=catalase;protein_id=WP_002228030.1;transl_table=11 NC_010634.1 RefSeq gene 1487323 1487865 . + . ID=gene1369;Name=YPTS_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06860;old_locus_tag=YPTS_1335 NC_010634.1 Protein Homology CDS 1487323 1487865 . + 0 ID=cds1312;Parent=gene1369;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11 NC_010634.1 RefSeq gene 1488081 1489289 . - . ID=gene1370;Name=YPTS_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06865;old_locus_tag=YPTS_1336 NC_010634.1 Protein Homology CDS 1488081 1489289 . - 0 ID=cds1313;Parent=gene1370;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NC_010634.1 RefSeq gene 1489909 1491102 . + . ID=gene1371;Name=YPTS_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06870;old_locus_tag=YPTS_1337 NC_010634.1 Protein Homology CDS 1489909 1491102 . + 0 ID=cds1314;Parent=gene1371;Dbxref=Genbank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210814.1;transl_table=11 NC_010634.1 RefSeq gene 1491160 1491669 . - . ID=gene1372;Name=YPTS_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06875;old_locus_tag=YPTS_1338 NC_010634.1 Protein Homology CDS 1491160 1491669 . - 0 ID=cds1315;Parent=gene1372;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11 NC_010634.1 RefSeq gene 1491704 1491961 . - . ID=gene1373;Name=YPTS_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06880;old_locus_tag=YPTS_1339 NC_010634.1 Protein Homology CDS 1491704 1491961 . - 0 ID=cds1316;Parent=gene1373;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11 NC_010634.1 RefSeq gene 1491965 1493095 . - . ID=gene1374;Name=YPTS_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06885;old_locus_tag=YPTS_1340 NC_010634.1 Protein Homology CDS 1491965 1493095 . - 0 ID=cds1317;Parent=gene1374;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NC_010634.1 RefSeq gene 1493257 1495545 . - . ID=gene1375;Name=YPTS_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06890;old_locus_tag=YPTS_1341 NC_010634.1 Protein Homology CDS 1493257 1495545 . - 0 ID=cds1318;Parent=gene1375;Dbxref=Genbank:WP_002210818.1;Name=WP_002210818.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NC_010634.1 RefSeq gene 1496039 1496767 . - . ID=gene1376;Name=YPTS_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06895;old_locus_tag=YPTS_1342 NC_010634.1 Protein Homology CDS 1496039 1496767 . - 0 ID=cds1319;Parent=gene1376;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11 NC_010634.1 RefSeq gene 1497067 1499742 . + . ID=gene1377;Name=YPTS_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06900;old_locus_tag=YPTS_1343 NC_010634.1 Protein Homology CDS 1497067 1499742 . + 0 ID=cds1320;Parent=gene1377;Dbxref=Genbank:WP_012413581.1;Name=WP_012413581.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_012413581.1;transl_table=11 NC_010634.1 RefSeq gene 1499745 1499870 . + . ID=gene1378;Name=YPTS_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06905;old_locus_tag=YPTS_1344 NC_010634.1 Protein Homology CDS 1499745 1499870 . + 0 ID=cds1321;Parent=gene1378;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11 NC_010634.1 RefSeq gene 1500023 1502803 . + . ID=gene1379;Name=YPTS_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06910;old_locus_tag=YPTS_1345 NC_010634.1 Protein Homology CDS 1500023 1502803 . + 0 ID=cds1322;Parent=gene1379;Dbxref=Genbank:WP_041175563.1;Name=WP_041175563.1;gbkey=CDS;product=histidine kinase;protein_id=WP_041175563.1;transl_table=11 NC_010634.1 RefSeq gene 1502871 1503524 . - . ID=gene1380;Name=YPTS_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06915;old_locus_tag=YPTS_1346 NC_010634.1 Protein Homology CDS 1502871 1503524 . - 0 ID=cds1323;Parent=gene1380;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11 NC_010634.1 RefSeq gene 1503527 1506220 . - . ID=gene1381;Name=YPTS_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06920;old_locus_tag=YPTS_1347 NC_010634.1 Protein Homology CDS 1503527 1506220 . - 0 ID=cds1324;Parent=gene1381;Dbxref=Genbank:WP_011191996.1;Name=WP_011191996.1;gbkey=CDS;product=ATPase;protein_id=WP_011191996.1;transl_table=11 NC_010634.1 RefSeq gene 1506244 1507398 . - . ID=gene1382;Name=YPTS_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06925;old_locus_tag=YPTS_1348 NC_010634.1 Protein Homology CDS 1506244 1507398 . - 0 ID=cds1325;Parent=gene1382;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NC_010634.1 RefSeq gene 1508502 1509617 . + . ID=gene1383;Name=YPTS_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06930;old_locus_tag=YPTS_1350 NC_010634.1 Protein Homology CDS 1508502 1509617 . + 0 ID=cds1326;Parent=gene1383;Dbxref=Genbank:WP_012413583.1;Name=WP_012413583.1;gbkey=CDS;product=porin;protein_id=WP_012413583.1;transl_table=11 NC_010634.1 RefSeq gene 1510001 1510088 . + . ID=gene1384;Name=YPTS_RS06935;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06935;old_locus_tag=YPTS_R0034 NC_010634.1 tRNAscan-SE tRNA 1510001 1510088 . + . ID=rna54;Parent=gene1384;anticodon=(pos:1510035..1510037);gbkey=tRNA;product=tRNA-Ser NC_010634.1 tRNAscan-SE exon 1510001 1510088 . + . ID=id110;Parent=rna54;anticodon=(pos:1510035..1510037);gbkey=tRNA;product=tRNA-Ser NC_010634.1 RefSeq gene 1510094 1510169 . + . ID=gene1385;Name=YPTS_RS06940;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS06940;old_locus_tag=YPTS_R0035 NC_010634.1 tRNAscan-SE tRNA 1510094 1510169 . + . ID=rna55;Parent=gene1385;anticodon=(pos:1510127..1510129);gbkey=tRNA;product=tRNA-Thr NC_010634.1 tRNAscan-SE exon 1510094 1510169 . + . ID=id111;Parent=rna55;anticodon=(pos:1510127..1510129);gbkey=tRNA;product=tRNA-Thr NC_010634.1 RefSeq gene 1510357 1511523 . - . ID=gene1386;Name=YPTS_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06945;old_locus_tag=YPTS_1351 NC_010634.1 Protein Homology CDS 1510357 1511523 . - 0 ID=cds1327;Parent=gene1386;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11 NC_010634.1 RefSeq gene 1511641 1511811 . + . ID=gene1387;Name=YPTS_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06950 NC_010634.1 Protein Homology CDS 1511641 1511811 . + 0 ID=cds1328;Parent=gene1387;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11 NC_010634.1 RefSeq gene 1511798 1513324 . - . ID=gene1388;Name=YPTS_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06955;old_locus_tag=YPTS_1352 NC_010634.1 Protein Homology CDS 1511798 1513324 . - 0 ID=cds1329;Parent=gene1388;Dbxref=Genbank:WP_012413584.1;Name=WP_012413584.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012413584.1;transl_table=11 NC_010634.1 RefSeq gene 1513740 1514729 . + . ID=gene1389;Name=YPTS_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06960;old_locus_tag=YPTS_1353 NC_010634.1 Protein Homology CDS 1513740 1514729 . + 0 ID=cds1330;Parent=gene1389;Dbxref=Genbank:WP_011906349.1;Name=WP_011906349.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_011906349.1;transl_table=11 NC_010634.1 RefSeq gene 1514803 1516590 . - . ID=gene1390;Name=YPTS_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06965;old_locus_tag=YPTS_1354 NC_010634.1 Protein Homology CDS 1514803 1516590 . - 0 ID=cds1331;Parent=gene1390;Dbxref=Genbank:WP_002208868.1;Name=WP_002208868.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NC_010634.1 RefSeq gene 1517042 1517977 . - . ID=gene1391;Name=YPTS_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06970;old_locus_tag=YPTS_1355 NC_010634.1 Protein Homology CDS 1517042 1517977 . - 0 ID=cds1332;Parent=gene1391;Dbxref=Genbank:WP_012413585.1;Name=WP_012413585.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_012413585.1;transl_table=11 NC_010634.1 RefSeq gene 1518149 1518391 . - . ID=gene1392;Name=YPTS_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06975;old_locus_tag=YPTS_1356 NC_010634.1 Protein Homology CDS 1518149 1518391 . - 0 ID=cds1333;Parent=gene1392;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11 NC_010634.1 RefSeq gene 1518597 1519319 . - . ID=gene1393;Name=YPTS_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06980;old_locus_tag=YPTS_1357 NC_010634.1 Protein Homology CDS 1518597 1519319 . - 0 ID=cds1334;Parent=gene1393;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11 NC_010634.1 RefSeq gene 1519593 1520072 . + . ID=gene1394;Name=YPTS_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06985;old_locus_tag=YPTS_1359 NC_010634.1 Protein Homology CDS 1519593 1520072 . + 0 ID=cds1335;Parent=gene1394;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11 NC_010634.1 RefSeq gene 1520283 1521587 . + . ID=gene1395;Name=YPTS_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06990;old_locus_tag=YPTS_1360 NC_010634.1 Protein Homology CDS 1520283 1521587 . + 0 ID=cds1336;Parent=gene1395;Dbxref=Genbank:WP_012304340.1;Name=WP_012304340.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_012304340.1;transl_table=11 NC_010634.1 RefSeq gene 1521644 1522315 . + . ID=gene1396;Name=YPTS_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS06995;old_locus_tag=YPTS_1361 NC_010634.1 Protein Homology CDS 1521644 1522315 . + 0 ID=cds1337;Parent=gene1396;Dbxref=Genbank:WP_032466639.1;Name=WP_032466639.1;gbkey=CDS;product=aldolase;protein_id=WP_032466639.1;transl_table=11 NC_010634.1 RefSeq gene 1522321 1523130 . + . ID=gene1397;Name=YPTS_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07000;old_locus_tag=YPTS_1362 NC_010634.1 Protein Homology CDS 1522321 1523130 . + 0 ID=cds1338;Parent=gene1397;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11 NC_010634.1 RefSeq gene 1523106 1523900 . + . ID=gene1398;Name=YPTS_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07005;old_locus_tag=YPTS_1363 NC_010634.1 Protein Homology CDS 1523106 1523900 . + 0 ID=cds1339;Parent=gene1398;Dbxref=Genbank:WP_002208860.1;Name=WP_002208860.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002208860.1;transl_table=11 NC_010634.1 RefSeq gene 1524140 1524430 . + . ID=gene1399;Name=YPTS_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07010;old_locus_tag=YPTS_1364 NC_010634.1 Protein Homology CDS 1524140 1524430 . + 0 ID=cds1340;Parent=gene1399;Dbxref=Genbank:WP_011192001.1;Name=WP_011192001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192001.1;transl_table=11 NC_010634.1 RefSeq gene 1524524 1525093 . + . ID=gene1400;Name=YPTS_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07015;old_locus_tag=YPTS_1365 NC_010634.1 Protein Homology CDS 1524524 1525093 . + 0 ID=cds1341;Parent=gene1400;Dbxref=Genbank:WP_002363609.1;Name=WP_002363609.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002363609.1;transl_table=11 NC_010634.1 RefSeq gene 1525098 1525292 . + . ID=gene1401;Name=YPTS_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07020;old_locus_tag=YPTS_1366 NC_010634.1 Protein Homology CDS 1525098 1525292 . + 0 ID=cds1342;Parent=gene1401;Dbxref=Genbank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208857.1;transl_table=11 NC_010634.1 RefSeq gene 1525289 1526797 . + . ID=gene1402;Name=YPTS_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07025;old_locus_tag=YPTS_1367 NC_010634.1 Protein Homology CDS 1525289 1526797 . + 0 ID=cds1343;Parent=gene1402;Dbxref=Genbank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;product=tail protein;protein_id=WP_002208856.1;transl_table=11 NC_010634.1 RefSeq gene 1526819 1527187 . + . ID=gene1403;Name=YPTS_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07030;old_locus_tag=YPTS_1368 NC_010634.1 Protein Homology CDS 1526819 1527187 . + 0 ID=cds1344;Parent=gene1403;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11 NC_010634.1 RefSeq gene 1527189 1527488 . + . ID=gene1404;Name=YPTS_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07035;old_locus_tag=YPTS_1369 NC_010634.1 Protein Homology CDS 1527189 1527488 . + 0 ID=cds1345;Parent=gene1404;Dbxref=Genbank:WP_002208854.1;Name=WP_002208854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208854.1;transl_table=11 NC_010634.1 RefSeq gene 1527609 1529102 . + . ID=gene1405;Name=YPTS_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07040;old_locus_tag=YPTS_1370 NC_010634.1 Protein Homology CDS 1527609 1529102 . + 0 ID=cds1346;Parent=gene1405;Dbxref=Genbank:WP_012413586.1;Name=WP_012413586.1;gbkey=CDS;product=coat protein;protein_id=WP_012413586.1;transl_table=11 NC_010634.1 RefSeq gene 1529138 1529344 . + . ID=gene1406;Name=YPTS_RS07045;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS07045 NC_010634.1 RefSeq repeat_region 1529142 1529311 . + . ID=id112;gbkey=repeat_region NC_010634.1 RefSeq gene 1529177 1529344 . + . ID=gene1407;Name=YPTS_RS21630;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS21630 NC_010634.1 RefSeq gene 1529369 1530775 . + . ID=gene1408;Name=YPTS_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07050;old_locus_tag=YPTS_1371 NC_010634.1 Protein Homology CDS 1529369 1530775 . + 0 ID=cds1347;Parent=gene1408;Dbxref=Genbank:WP_002208852.1;Name=WP_002208852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208852.1;transl_table=11 NC_010634.1 RefSeq gene 1530772 1531827 . + . ID=gene1409;Name=YPTS_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07055;old_locus_tag=YPTS_1372 NC_010634.1 Protein Homology CDS 1530772 1531827 . + 0 ID=cds1348;Parent=gene1409;Dbxref=Genbank:WP_012413587.1;Name=WP_012413587.1;gbkey=CDS;product=tail protein;protein_id=WP_012413587.1;transl_table=11 NC_010634.1 RefSeq gene 1531843 1532439 . + . ID=gene1410;Name=YPTS_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07060;old_locus_tag=YPTS_1373 NC_010634.1 Protein Homology CDS 1531843 1532439 . + 0 ID=cds1349;Parent=gene1410;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11 NC_010634.1 RefSeq gene 1532436 1532891 . + . ID=gene1411;Name=YPTS_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07065;old_locus_tag=YPTS_1374 NC_010634.1 Protein Homology CDS 1532436 1532891 . + 0 ID=cds1350;Parent=gene1411;Dbxref=Genbank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208848.1;transl_table=11 NC_010634.1 RefSeq gene 1532895 1534031 . + . ID=gene1412;Name=YPTS_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07070;old_locus_tag=YPTS_1375 NC_010634.1 Protein Homology CDS 1532895 1534031 . + 0 ID=cds1351;Parent=gene1412;Dbxref=Genbank:WP_012413588.1;Name=WP_012413588.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413588.1;transl_table=11 NC_010634.1 RefSeq gene 1534028 1534286 . + . ID=gene1413;Name=YPTS_RS07075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS07075;pseudo=true NC_010634.1 Protein Homology CDS 1534028 1534286 . + 0 ID=cds1352;Parent=gene1413;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1534283 1534630 . + . ID=gene1414;Name=YPTS_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07080 NC_010634.1 Protein Homology CDS 1534283 1534630 . + 0 ID=cds1353;Parent=gene1414;Dbxref=Genbank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208846.1;transl_table=11 NC_010634.1 RefSeq gene 1534727 1535506 . + . ID=gene1415;Name=YPTS_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07085;old_locus_tag=YPTS_1377 NC_010634.1 Protein Homology CDS 1534727 1535506 . + 0 ID=cds1354;Parent=gene1415;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11 NC_010634.1 RefSeq gene 1535804 1536544 . + . ID=gene1416;Name=YPTS_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07090;old_locus_tag=YPTS_1378 NC_010634.1 Protein Homology CDS 1535804 1536544 . + 0 ID=cds1355;Parent=gene1416;Dbxref=Genbank:WP_002208843.1;Name=WP_002208843.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NC_010634.1 RefSeq gene 1536835 1538271 . + . ID=gene1417;Name=YPTS_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07095;old_locus_tag=YPTS_1380 NC_010634.1 Protein Homology CDS 1536835 1538271 . + 0 ID=cds1356;Parent=gene1417;Dbxref=Genbank:WP_002208842.1;Name=WP_002208842.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NC_010634.1 RefSeq gene 1538397 1538759 . - . ID=gene1418;Name=YPTS_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07100;old_locus_tag=YPTS_1381 NC_010634.1 Protein Homology CDS 1538397 1538759 . - 0 ID=cds1357;Parent=gene1418;Dbxref=Genbank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1539080 1539200 . + . ID=id113;gbkey=repeat_region NC_010634.1 RefSeq gene 1539345 1539629 . - . ID=gene1419;Name=YPTS_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07110;old_locus_tag=YPTS_1383 NC_010634.1 Protein Homology CDS 1539345 1539629 . - 0 ID=cds1358;Parent=gene1419;Dbxref=Genbank:WP_012413589.1;Name=WP_012413589.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_012413589.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1539648 1539858 . + . ID=id114;gbkey=repeat_region NC_010634.1 RefSeq gene 1539658 1539861 . - . ID=gene1420;Name=YPTS_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07115 NC_010634.1 Protein Homology CDS 1539658 1539861 . - 0 ID=cds1359;Parent=gene1420;Dbxref=Genbank:WP_025382022.1;Name=WP_025382022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025382022.1;transl_table=11 NC_010634.1 RefSeq gene 1540178 1540993 . - . ID=gene1421;Name=YPTS_RS07120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS07120;partial=true;pseudo=true;start_range=.,1540178 NC_010634.1 Protein Homology CDS 1540178 1540993 . - 0 ID=cds1360;Parent=gene1421;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,1540178;transl_table=11 NC_010634.1 RefSeq repeat_region 1540524 1541112 . + . ID=id115;gbkey=repeat_region NC_010634.1 RefSeq gene 1541170 1541391 . - . ID=gene1422;Name=YPTS_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07125;old_locus_tag=YPTS_1386 NC_010634.1 Protein Homology CDS 1541170 1541391 . - 0 ID=cds1361;Parent=gene1422;Dbxref=Genbank:WP_012413590.1;Name=WP_012413590.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413590.1;transl_table=11 NC_010634.1 RefSeq gene 1541785 1541861 . - . ID=gene1423;Name=YPTS_RS07135;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS07135;old_locus_tag=YPTS_R0073 NC_010634.1 tRNAscan-SE tRNA 1541785 1541861 . - . ID=rna56;Parent=gene1423;anticodon=(pos:complement(1541825..1541827));gbkey=tRNA;product=tRNA-Pro NC_010634.1 tRNAscan-SE exon 1541785 1541861 . - . ID=id116;Parent=rna56;anticodon=(pos:complement(1541825..1541827));gbkey=tRNA;product=tRNA-Pro NC_010634.1 RefSeq gene 1541966 1543762 . - . ID=gene1424;Name=YPTS_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07140;old_locus_tag=YPTS_1388 NC_010634.1 Protein Homology CDS 1541966 1543762 . - 0 ID=cds1362;Parent=gene1424;Dbxref=Genbank:WP_002208837.1;Name=WP_002208837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208837.1;transl_table=11 NC_010634.1 RefSeq gene 1543790 1544017 . - . ID=gene1425;Name=YPTS_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07145;old_locus_tag=YPTS_1389 NC_010634.1 Protein Homology CDS 1543790 1544017 . - 0 ID=cds1363;Parent=gene1425;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11 NC_010634.1 RefSeq gene 1544195 1545199 . + . ID=gene1426;Name=YPTS_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07150;old_locus_tag=YPTS_1390 NC_010634.1 Protein Homology CDS 1544195 1545199 . + 0 ID=cds1364;Parent=gene1426;Dbxref=Genbank:WP_011192011.1;Name=WP_011192011.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_011192011.1;transl_table=11 NC_010634.1 RefSeq gene 1545287 1545571 . - . ID=gene1427;Name=YPTS_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07155;old_locus_tag=YPTS_1391 NC_010634.1 Protein Homology CDS 1545287 1545571 . - 0 ID=cds1365;Parent=gene1427;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NC_010634.1 RefSeq gene 1545733 1547490 . - . ID=gene1428;Name=YPTS_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07160;old_locus_tag=YPTS_1392 NC_010634.1 Protein Homology CDS 1545733 1547490 . - 0 ID=cds1366;Parent=gene1428;Dbxref=Genbank:WP_011192012.1;Name=WP_011192012.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192012.1;transl_table=11 NC_010634.1 RefSeq gene 1548024 1548731 . + . ID=gene1429;Name=YPTS_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07165;old_locus_tag=YPTS_1393 NC_010634.1 Protein Homology CDS 1548024 1548731 . + 0 ID=cds1367;Parent=gene1429;Dbxref=Genbank:WP_011192013.1;Name=WP_011192013.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=16S rRNA pseudouridylate synthase;protein_id=WP_011192013.1;transl_table=11 NC_010634.1 RefSeq gene 1548865 1550064 . + . ID=gene1430;Name=YPTS_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07170;old_locus_tag=YPTS_1394 NC_010634.1 Protein Homology CDS 1548865 1550064 . + 0 ID=cds1368;Parent=gene1430;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11 NC_010634.1 RefSeq gene 1551067 1551411 . + . ID=gene1431;Name=YPTS_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07175;old_locus_tag=YPTS_1395 NC_010634.1 Protein Homology CDS 1551067 1551411 . + 0 ID=cds1369;Parent=gene1431;Dbxref=Genbank:WP_011192014.1;Name=WP_011192014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192014.1;transl_table=11 NC_010634.1 RefSeq gene 1551472 1553064 . - . ID=gene1432;Name=YPTS_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07180;old_locus_tag=YPTS_1396 NC_010634.1 Protein Homology CDS 1551472 1553064 . - 0 ID=cds1370;Parent=gene1432;Dbxref=Genbank:WP_011192015.1;Name=WP_011192015.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_011192015.1;transl_table=11 NC_010634.1 RefSeq gene 1553066 1554091 . - . ID=gene1433;Name=YPTS_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07185;old_locus_tag=YPTS_1397 NC_010634.1 Protein Homology CDS 1553066 1554091 . - 0 ID=cds1371;Parent=gene1433;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NC_010634.1 RefSeq gene 1554094 1555194 . - . ID=gene1434;Name=YPTS_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07190;old_locus_tag=YPTS_1398 NC_010634.1 Protein Homology CDS 1554094 1555194 . - 0 ID=cds1372;Parent=gene1434;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NC_010634.1 RefSeq gene 1555204 1557012 . - . ID=gene1435;Name=YPTS_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07195;old_locus_tag=YPTS_1399 NC_010634.1 Protein Homology CDS 1555204 1557012 . - 0 ID=cds1373;Parent=gene1435;Dbxref=Genbank:WP_011192016.1;Name=WP_011192016.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_011192016.1;transl_table=11 NC_010634.1 RefSeq gene 1557094 1558566 . - . ID=gene1436;Name=YPTS_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07200;old_locus_tag=YPTS_1400 NC_010634.1 Protein Homology CDS 1557094 1558566 . - 0 ID=cds1374;Parent=gene1436;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11 NC_010634.1 RefSeq gene 1559260 1559844 . - . ID=gene1437;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=YPTS_RS07205;old_locus_tag=YPTS_1401 NC_010634.1 Protein Homology CDS 1559260 1559844 . - 0 ID=cds1375;Parent=gene1437;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11 NC_010634.1 RefSeq gene 1560286 1560987 . - . ID=gene1438;Name=YPTS_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07210;old_locus_tag=YPTS_1402 NC_010634.1 Protein Homology CDS 1560286 1560987 . - 0 ID=cds1376;Parent=gene1438;Dbxref=Genbank:WP_011192018.1;Name=WP_011192018.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192018.1;transl_table=11 NC_010634.1 RefSeq gene 1561046 1562029 . - . ID=gene1439;Name=YPTS_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07215;old_locus_tag=YPTS_1403 NC_010634.1 Protein Homology CDS 1561046 1562029 . - 0 ID=cds1377;Parent=gene1439;Dbxref=Genbank:WP_012413591.1;Name=WP_012413591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413591.1;transl_table=11 NC_010634.1 RefSeq gene 1562353 1562466 . - . ID=gene1440;Name=YPTS_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07220 NC_010634.1 Protein Homology CDS 1562353 1562466 . - 0 ID=cds1378;Parent=gene1440;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11 NC_010634.1 RefSeq gene 1562837 1563580 . + . ID=gene1441;Name=YPTS_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07225;old_locus_tag=YPTS_1405 NC_010634.1 Protein Homology CDS 1562837 1563580 . + 0 ID=cds1379;Parent=gene1441;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NC_010634.1 RefSeq gene 1563724 1565196 . - . ID=gene1442;Name=YPTS_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07230;old_locus_tag=YPTS_1406 NC_010634.1 Protein Homology CDS 1563724 1565196 . - 0 ID=cds1380;Parent=gene1442;Dbxref=Genbank:WP_012413592.1;Name=WP_012413592.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_012413592.1;transl_table=11 NC_010634.1 RefSeq gene 1565788 1566981 . + . ID=gene1443;Name=YPTS_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07235;old_locus_tag=YPTS_1407 NC_010634.1 Protein Homology CDS 1565788 1566981 . + 0 ID=cds1381;Parent=gene1443;Dbxref=Genbank:WP_011192020.1;Name=WP_011192020.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_011192020.1;transl_table=11 NC_010634.1 RefSeq gene 1567121 1567693 . - . ID=gene1444;Name=YPTS_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07240;old_locus_tag=YPTS_1408 NC_010634.1 Protein Homology CDS 1567121 1567693 . - 0 ID=cds1382;Parent=gene1444;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11 NC_010634.1 RefSeq gene 1567797 1569041 . - . ID=gene1445;Name=YPTS_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07245;old_locus_tag=YPTS_1409 NC_010634.1 Protein Homology CDS 1567797 1569041 . - 0 ID=cds1383;Parent=gene1445;Dbxref=Genbank:WP_012413593.1;Name=WP_012413593.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_012413593.1;transl_table=11 NC_010634.1 RefSeq gene 1569471 1569725 . + . ID=gene1446;Name=YPTS_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07250;old_locus_tag=YPTS_1410 NC_010634.1 Protein Homology CDS 1569471 1569725 . + 0 ID=cds1384;Parent=gene1446;Dbxref=Genbank:WP_011192021.1;Name=WP_011192021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192021.1;transl_table=11 NC_010634.1 RefSeq gene 1569794 1570609 . - . ID=gene1447;Name=YPTS_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07255;old_locus_tag=YPTS_1411 NC_010634.1 Protein Homology CDS 1569794 1570609 . - 0 ID=cds1385;Parent=gene1447;Dbxref=Genbank:WP_012413594.1;Name=WP_012413594.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_012413594.1;transl_table=11 NC_010634.1 RefSeq gene 1570620 1571570 . - . ID=gene1448;Name=YPTS_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07260;old_locus_tag=YPTS_1412 NC_010634.1 Protein Homology CDS 1570620 1571570 . - 0 ID=cds1386;Parent=gene1448;Dbxref=Genbank:WP_011906343.1;Name=WP_011906343.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_011906343.1;transl_table=11 NC_010634.1 RefSeq gene 1571582 1572724 . - . ID=gene1449;Name=YPTS_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07265;old_locus_tag=YPTS_1413 NC_010634.1 Protein Homology CDS 1571582 1572724 . - 0 ID=cds1387;Parent=gene1449;Dbxref=Genbank:WP_011192023.1;Name=WP_011192023.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_011192023.1;transl_table=11 NC_010634.1 RefSeq gene 1573076 1574572 . + . ID=gene1450;Name=YPTS_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07270;old_locus_tag=YPTS_1415 NC_010634.1 Protein Homology CDS 1573076 1574572 . + 0 ID=cds1388;Parent=gene1450;Dbxref=Genbank:WP_011192024.1;Name=WP_011192024.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_011192024.1;transl_table=11 NC_010634.1 RefSeq gene 1574576 1576129 . + . ID=gene1451;Name=YPTS_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07275;old_locus_tag=YPTS_1416 NC_010634.1 Protein Homology CDS 1574576 1576129 . + 0 ID=cds1389;Parent=gene1451;Dbxref=Genbank:WP_011192025.1;Name=WP_011192025.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_011192025.1;transl_table=11 NC_010634.1 RefSeq gene 1576149 1576860 . + . ID=gene1452;Name=YPTS_RS07280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS07280;pseudo=true NC_010634.1 Protein Homology CDS 1576149 1576860 . + 0 ID=cds1390;Parent=gene1452;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ribose 5-phosphate isomerase;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1576969 1578060 . + . ID=gene1453;Name=YPTS_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07285;old_locus_tag=YPTS_1419 NC_010634.1 Protein Homology CDS 1576969 1578060 . + 0 ID=cds1391;Parent=gene1453;Dbxref=Genbank:WP_042592922.1;Name=WP_042592922.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_042592922.1;transl_table=11 NC_010634.1 RefSeq gene 1578229 1579743 . + . ID=gene1454;Name=YPTS_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07290;old_locus_tag=YPTS_1421 NC_010634.1 Protein Homology CDS 1578229 1579743 . + 0 ID=cds1392;Parent=gene1454;Dbxref=Genbank:WP_042592923.1;Name=WP_042592923.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_042592923.1;transl_table=11 NC_010634.1 RefSeq gene 1579779 1580777 . + . ID=gene1455;Name=YPTS_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07295;old_locus_tag=YPTS_1422 NC_010634.1 Protein Homology CDS 1579779 1580777 . + 0 ID=cds1393;Parent=gene1455;Dbxref=Genbank:WP_011192028.1;Name=WP_011192028.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011192028.1;transl_table=11 NC_010634.1 RefSeq gene 1580870 1581325 . - . ID=gene1456;Name=YPTS_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07300;old_locus_tag=YPTS_1423 NC_010634.1 Protein Homology CDS 1580870 1581325 . - 0 ID=cds1394;Parent=gene1456;Dbxref=Genbank:WP_002208801.1;Name=WP_002208801.1;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=WP_002208801.1;transl_table=11 NC_010634.1 RefSeq gene 1581587 1582720 . + . ID=gene1457;Name=YPTS_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07305;old_locus_tag=YPTS_1424 NC_010634.1 Protein Homology CDS 1581587 1582720 . + 0 ID=cds1395;Parent=gene1457;Dbxref=Genbank:WP_002208799.1;Name=WP_002208799.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002208799.1;transl_table=11 NC_010634.1 RefSeq gene 1582717 1583655 . + . ID=gene1458;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YPTS_RS07310;old_locus_tag=YPTS_1425 NC_010634.1 Protein Homology CDS 1582717 1583655 . + 0 ID=cds1396;Parent=gene1458;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NC_010634.1 RefSeq gene 1583670 1585370 . + . ID=gene1459;Name=YPTS_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07315;old_locus_tag=YPTS_1426 NC_010634.1 Protein Homology CDS 1583670 1585370 . + 0 ID=cds1397;Parent=gene1459;Dbxref=Genbank:WP_011192029.1;Name=WP_011192029.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_011192029.1;transl_table=11 NC_010634.1 RefSeq gene 1585695 1586339 . + . ID=gene1460;Name=YPTS_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07320;old_locus_tag=YPTS_1427 NC_010634.1 Protein Homology CDS 1585695 1586339 . + 0 ID=cds1398;Parent=gene1460;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11 NC_010634.1 RefSeq gene 1586336 1586824 . + . ID=gene1461;Name=YPTS_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07325;old_locus_tag=YPTS_1428 NC_010634.1 Protein Homology CDS 1586336 1586824 . + 0 ID=cds1399;Parent=gene1461;Dbxref=Genbank:WP_012105409.1;Name=WP_012105409.1;gbkey=CDS;product=protein PsaF;protein_id=WP_012105409.1;transl_table=11 NC_010634.1 RefSeq gene 1587369 1587845 . + . ID=gene1462;Name=YPTS_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07330;old_locus_tag=YPTS_1429 NC_010634.1 Protein Homology CDS 1587369 1587845 . + 0 ID=cds1400;Parent=gene1462;Dbxref=Genbank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_002208794.1;transl_table=11 NC_010634.1 RefSeq gene 1587972 1588793 . + . ID=gene1463;Name=YPTS_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07335;old_locus_tag=YPTS_1430 NC_010634.1 Protein Homology CDS 1587972 1588793 . + 0 ID=cds1401;Parent=gene1463;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NC_010634.1 RefSeq gene 1588877 1591348 . + . ID=gene1464;Name=YPTS_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07340;old_locus_tag=YPTS_1431 NC_010634.1 Protein Homology CDS 1588877 1591348 . + 0 ID=cds1402;Parent=gene1464;Dbxref=Genbank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;product=usher protein;protein_id=WP_002208792.1;transl_table=11 NC_010634.1 RefSeq gene 1591435 1592292 . - . ID=gene1465;Name=YPTS_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07345;old_locus_tag=YPTS_1432 NC_010634.1 Protein Homology CDS 1591435 1592292 . - 0 ID=cds1403;Parent=gene1465;Dbxref=Genbank:WP_002208791.1;Name=WP_002208791.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_002208791.1;transl_table=11 NC_010634.1 RefSeq gene 1592456 1593544 . - . ID=gene1466;Name=YPTS_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07350;old_locus_tag=YPTS_1433 NC_010634.1 Protein Homology CDS 1592456 1593544 . - 0 ID=cds1404;Parent=gene1466;Dbxref=Genbank:WP_002208790.1;Name=WP_002208790.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208790.1;transl_table=11 NC_010634.1 RefSeq gene 1594202 1595074 . + . ID=gene1467;Name=YPTS_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07355;old_locus_tag=YPTS_1434 NC_010634.1 Protein Homology CDS 1594202 1595074 . + 0 ID=cds1405;Parent=gene1467;Dbxref=Genbank:WP_002208788.1;Name=WP_002208788.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208788.1;transl_table=11 NC_010634.1 RefSeq gene 1595332 1596843 . + . ID=gene1468;Name=YPTS_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07360;old_locus_tag=YPTS_1436 NC_010634.1 Protein Homology CDS 1595332 1596843 . + 0 ID=cds1406;Parent=gene1468;Dbxref=Genbank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;product=lysine transporter;protein_id=WP_002208786.1;transl_table=11 NC_010634.1 RefSeq gene 1597129 1598274 . + . ID=gene1469;Name=YPTS_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07365;old_locus_tag=YPTS_1437 NC_010634.1 Protein Homology CDS 1597129 1598274 . + 0 ID=cds1407;Parent=gene1469;Dbxref=Genbank:WP_024063488.1;Name=WP_024063488.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_024063488.1;transl_table=11 NC_010634.1 RefSeq gene 1598493 1599575 . + . ID=gene1470;Name=YPTS_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07370;old_locus_tag=YPTS_1438 NC_010634.1 Protein Homology CDS 1598493 1599575 . + 0 ID=cds1408;Parent=gene1470;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NC_010634.1 RefSeq gene 1599572 1600360 . + . ID=gene1471;Name=YPTS_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07375;old_locus_tag=YPTS_1439 NC_010634.1 Protein Homology CDS 1599572 1600360 . + 0 ID=cds1409;Parent=gene1471;Dbxref=Genbank:WP_011192030.1;Name=WP_011192030.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_011192030.1;transl_table=11 NC_010634.1 RefSeq gene 1600620 1602617 . + . ID=gene1472;Name=YPTS_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07380;old_locus_tag=YPTS_1440 NC_010634.1 Protein Homology CDS 1600620 1602617 . + 0 ID=cds1410;Parent=gene1472;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NC_010634.1 RefSeq gene 1602765 1603385 . - . ID=gene1473;Name=YPTS_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07385;old_locus_tag=YPTS_1441 NC_010634.1 Protein Homology CDS 1602765 1603385 . - 0 ID=cds1411;Parent=gene1473;Dbxref=Genbank:WP_002208781.1;Name=WP_002208781.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002208781.1;transl_table=11 NC_010634.1 RefSeq gene 1603530 1604180 . - . ID=gene1474;Name=YPTS_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07390;old_locus_tag=YPTS_1442 NC_010634.1 Protein Homology CDS 1603530 1604180 . - 0 ID=cds1412;Parent=gene1474;Dbxref=Genbank:WP_002215448.1;Name=WP_002215448.1;gbkey=CDS;product=hydrolase;protein_id=WP_002215448.1;transl_table=11 NC_010634.1 RefSeq gene 1604667 1605734 . + . ID=gene1475;Name=YPTS_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07395;old_locus_tag=YPTS_1444 NC_010634.1 Protein Homology CDS 1604667 1605734 . + 0 ID=cds1413;Parent=gene1475;Dbxref=Genbank:WP_012105406.1;Name=WP_012105406.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_012105406.1;transl_table=11 NC_010634.1 RefSeq gene 1605962 1606786 . + . ID=gene1476;Name=YPTS_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07400;old_locus_tag=YPTS_1445 NC_010634.1 Protein Homology CDS 1605962 1606786 . + 0 ID=cds1414;Parent=gene1476;Dbxref=Genbank:WP_011192034.1;Name=WP_011192034.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_011192034.1;transl_table=11 NC_010634.1 RefSeq gene 1606783 1607769 . + . ID=gene1477;Name=YPTS_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07405;old_locus_tag=YPTS_1446 NC_010634.1 Protein Homology CDS 1606783 1607769 . + 0 ID=cds1415;Parent=gene1477;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NC_010634.1 RefSeq gene 1607766 1608437 . + . ID=gene1478;Name=YPTS_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07410;old_locus_tag=YPTS_1447 NC_010634.1 Protein Homology CDS 1607766 1608437 . + 0 ID=cds1416;Parent=gene1478;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NC_010634.1 RefSeq gene 1608772 1609977 . + . ID=gene1479;Name=YPTS_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07415;old_locus_tag=YPTS_1448 NC_010634.1 Protein Homology CDS 1608772 1609977 . + 0 ID=cds1417;Parent=gene1479;Dbxref=Genbank:WP_012413598.1;Name=WP_012413598.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_012413598.1;transl_table=11 NC_010634.1 RefSeq gene 1610286 1610438 . + . ID=gene1480;Name=YPTS_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07420 NC_010634.1 Protein Homology CDS 1610286 1610438 . + 0 ID=cds1418;Parent=gene1480;Dbxref=Genbank:WP_002215444.1;Name=WP_002215444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215444.1;transl_table=11 NC_010634.1 RefSeq gene 1610435 1611736 . - . ID=gene1481;Name=YPTS_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07425;old_locus_tag=YPTS_1449 NC_010634.1 Protein Homology CDS 1610435 1611736 . - 0 ID=cds1419;Parent=gene1481;Dbxref=Genbank:WP_011192035.1;Name=WP_011192035.1;gbkey=CDS;product=serine/threonine transporter;protein_id=WP_011192035.1;transl_table=11 NC_010634.1 RefSeq gene 1612836 1613600 . - . ID=gene1482;Name=YPTS_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07430;old_locus_tag=YPTS_1450 NC_010634.1 Protein Homology CDS 1612836 1613600 . - 0 ID=cds1420;Parent=gene1482;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11 NC_010634.1 RefSeq gene 1613830 1614501 . - . ID=gene1483;Name=YPTS_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07435;old_locus_tag=YPTS_1451 NC_010634.1 Protein Homology CDS 1613830 1614501 . - 0 ID=cds1421;Parent=gene1483;Dbxref=Genbank:WP_002208769.1;Name=WP_002208769.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NC_010634.1 RefSeq gene 1614759 1615364 . - . ID=gene1484;Name=YPTS_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07440;old_locus_tag=YPTS_1452 NC_010634.1 Protein Homology CDS 1614759 1615364 . - 0 ID=cds1422;Parent=gene1484;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11 NC_010634.1 RefSeq gene 1615364 1616035 . - . ID=gene1485;Name=YPTS_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07445;old_locus_tag=YPTS_1453 NC_010634.1 Protein Homology CDS 1615364 1616035 . - 0 ID=cds1423;Parent=gene1485;Dbxref=Genbank:WP_024063536.1;Name=WP_024063536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063536.1;transl_table=11 NC_010634.1 RefSeq gene 1616512 1618200 . - . ID=gene1486;Name=YPTS_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07450;old_locus_tag=YPTS_1454 NC_010634.1 Protein Homology CDS 1616512 1618200 . - 0 ID=cds1424;Parent=gene1486;Dbxref=Genbank:WP_002208766.1;Name=WP_002208766.1;gbkey=CDS;product=transporter;protein_id=WP_002208766.1;transl_table=11 NC_010634.1 RefSeq gene 1618610 1618873 . - . ID=gene1487;Name=YPTS_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07455;old_locus_tag=YPTS_1455 NC_010634.1 Protein Homology CDS 1618610 1618873 . - 0 ID=cds1425;Parent=gene1487;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NC_010634.1 RefSeq gene 1619336 1619650 . + . ID=gene1488;Name=YPTS_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07460;old_locus_tag=YPTS_1456 NC_010634.1 Protein Homology CDS 1619336 1619650 . + 0 ID=cds1426;Parent=gene1488;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11 NC_010634.1 RefSeq gene 1619666 1619785 . + . ID=gene1489;Name=YPTS_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07465 NC_010634.1 Protein Homology CDS 1619666 1619785 . + 0 ID=cds1427;Parent=gene1489;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11 NC_010634.1 RefSeq gene 1619792 1620277 . + . ID=gene1490;Name=YPTS_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07470;old_locus_tag=YPTS_1457 NC_010634.1 Protein Homology CDS 1619792 1620277 . + 0 ID=cds1428;Parent=gene1490;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11 NC_010634.1 RefSeq gene 1620830 1621939 . + . ID=gene1491;Name=YPTS_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07475;old_locus_tag=YPTS_1458 NC_010634.1 Protein Homology CDS 1620830 1621939 . + 0 ID=cds1429;Parent=gene1491;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11 NC_010634.1 RefSeq gene 1622110 1623243 . + . ID=gene1492;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YPTS_RS07480;old_locus_tag=YPTS_1459 NC_010634.1 Protein Homology CDS 1622110 1623243 . + 0 ID=cds1430;Parent=gene1492;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11 NC_010634.1 RefSeq gene 1623268 1624233 . + . ID=gene1493;Name=YPTS_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07485;old_locus_tag=YPTS_1460 NC_010634.1 Protein Homology CDS 1623268 1624233 . + 0 ID=cds1431;Parent=gene1493;Dbxref=Genbank:WP_011192037.1;Name=WP_011192037.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_011192037.1;transl_table=11 NC_010634.1 RefSeq gene 1624230 1625054 . + . ID=gene1494;Name=YPTS_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07490;old_locus_tag=YPTS_1461 NC_010634.1 Protein Homology CDS 1624230 1625054 . + 0 ID=cds1432;Parent=gene1494;Dbxref=Genbank:WP_012413599.1;Name=WP_012413599.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_012413599.1;transl_table=11 NC_010634.1 RefSeq gene 1625179 1625643 . + . ID=gene1495;Name=YPTS_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07495;old_locus_tag=YPTS_1462 NC_010634.1 Protein Homology CDS 1625179 1625643 . + 0 ID=cds1433;Parent=gene1495;Dbxref=Genbank:WP_011192038.1;Name=WP_011192038.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192038.1;transl_table=11 NC_010634.1 RefSeq gene 1625727 1626857 . + . ID=gene1496;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=YPTS_RS07500;old_locus_tag=YPTS_1463 NC_010634.1 Protein Homology CDS 1625727 1626857 . + 0 ID=cds1434;Parent=gene1496;Dbxref=Genbank:WP_011192039.1;Name=WP_011192039.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_011192039.1;transl_table=11 NC_010634.1 RefSeq gene 1626984 1627715 . - . ID=gene1497;Name=YPTS_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07505;old_locus_tag=YPTS_1464 NC_010634.1 Protein Homology CDS 1626984 1627715 . - 0 ID=cds1435;Parent=gene1497;Dbxref=Genbank:WP_011192040.1;Name=WP_011192040.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_011192040.1;transl_table=11 NC_010634.1 RefSeq gene 1627834 1627950 . + . ID=gene1498;Name=YPTS_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07510;old_locus_tag=YPTS_1465 NC_010634.1 Protein Homology CDS 1627834 1627950 . + 0 ID=cds1436;Parent=gene1498;Dbxref=Genbank:WP_012105399.1;Name=WP_012105399.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105399.1;transl_table=11 NC_010634.1 RefSeq gene 1628484 1629410 . + . ID=gene1499;Name=YPTS_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07515;old_locus_tag=YPTS_1467 NC_010634.1 Protein Homology CDS 1628484 1629410 . + 0 ID=cds1437;Parent=gene1499;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11 NC_010634.1 RefSeq gene 1629824 1630915 . + . ID=gene1500;Name=YPTS_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07520;old_locus_tag=YPTS_1468 NC_010634.1 Protein Homology CDS 1629824 1630915 . + 0 ID=cds1438;Parent=gene1500;Dbxref=Genbank:WP_012413601.1;Name=WP_012413601.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012413601.1;transl_table=11 NC_010634.1 RefSeq gene 1630915 1631973 . + . ID=gene1501;Name=YPTS_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07525;old_locus_tag=YPTS_1469 NC_010634.1 Protein Homology CDS 1630915 1631973 . + 0 ID=cds1439;Parent=gene1501;Dbxref=Genbank:WP_011192042.1;Name=WP_011192042.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_011192042.1;transl_table=11 NC_010634.1 RefSeq gene 1631970 1632755 . + . ID=gene1502;Name=YPTS_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07530;old_locus_tag=YPTS_1470 NC_010634.1 Protein Homology CDS 1631970 1632755 . + 0 ID=cds1440;Parent=gene1502;Dbxref=Genbank:WP_002211375.1;Name=WP_002211375.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002211375.1;transl_table=11 NC_010634.1 RefSeq gene 1632743 1633540 . + . ID=gene1503;Name=YPTS_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07535;old_locus_tag=YPTS_1471 NC_010634.1 Protein Homology CDS 1632743 1633540 . + 0 ID=cds1441;Parent=gene1503;Dbxref=Genbank:WP_012304311.1;Name=WP_012304311.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_012304311.1;transl_table=11 NC_010634.1 RefSeq gene 1633533 1634903 . + . ID=gene1504;Name=YPTS_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07540;old_locus_tag=YPTS_1472 NC_010634.1 Protein Homology CDS 1633533 1634903 . + 0 ID=cds1442;Parent=gene1504;Dbxref=Genbank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211373.1;transl_table=11 NC_010634.1 RefSeq gene 1634900 1635745 . + . ID=gene1505;Name=YPTS_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07545;old_locus_tag=YPTS_1473 NC_010634.1 Protein Homology CDS 1634900 1635745 . + 0 ID=cds1443;Parent=gene1505;Dbxref=Genbank:WP_002223483.1;Name=WP_002223483.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223483.1;transl_table=11 NC_010634.1 RefSeq gene 1635953 1636621 . - . ID=gene1506;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YPTS_RS07555;old_locus_tag=YPTS_1474 NC_010634.1 Protein Homology CDS 1635953 1636621 . - 0 ID=cds1444;Parent=gene1506;Dbxref=Genbank:WP_012413602.1;Name=WP_012413602.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_012413602.1;transl_table=11 NC_010634.1 RefSeq gene 1636621 1637337 . - . ID=gene1507;Name=YPTS_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07560;old_locus_tag=YPTS_1475 NC_010634.1 Protein Homology CDS 1636621 1637337 . - 0 ID=cds1445;Parent=gene1507;Dbxref=Genbank:WP_002211369.1;Name=WP_002211369.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_002211369.1;transl_table=11 NC_010634.1 RefSeq gene 1637349 1638080 . - . ID=gene1508;Name=YPTS_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07565;old_locus_tag=YPTS_1476 NC_010634.1 Protein Homology CDS 1637349 1638080 . - 0 ID=cds1446;Parent=gene1508;Dbxref=Genbank:WP_002211368.1;Name=WP_002211368.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NC_010634.1 RefSeq gene 1638101 1638829 . - . ID=gene1509;Name=YPTS_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07570;old_locus_tag=YPTS_1477 NC_010634.1 Protein Homology CDS 1638101 1638829 . - 0 ID=cds1447;Parent=gene1509;Dbxref=Genbank:WP_011192044.1;Name=WP_011192044.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_011192044.1;transl_table=11 NC_010634.1 RefSeq gene 1639124 1639684 . - . ID=gene1510;Name=YPTS_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07575;old_locus_tag=YPTS_1478 NC_010634.1 Protein Homology CDS 1639124 1639684 . - 0 ID=cds1448;Parent=gene1510;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NC_010634.1 RefSeq gene 1639854 1640429 . - . ID=gene1511;Name=YPTS_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07580;old_locus_tag=YPTS_1479 NC_010634.1 Protein Homology CDS 1639854 1640429 . - 0 ID=cds1449;Parent=gene1511;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NC_010634.1 RefSeq gene 1640526 1641533 . - . ID=gene1512;Name=YPTS_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07585;old_locus_tag=YPTS_1480 NC_010634.1 Protein Homology CDS 1640526 1641533 . - 0 ID=cds1450;Parent=gene1512;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11 NC_010634.1 RefSeq gene 1641633 1643123 . - . ID=gene1513;Name=YPTS_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07590;old_locus_tag=YPTS_1481 NC_010634.1 Protein Homology CDS 1641633 1643123 . - 0 ID=cds1451;Parent=gene1513;Dbxref=Genbank:WP_011192045.1;Name=WP_011192045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192045.1;transl_table=11 NC_010634.1 RefSeq gene 1643120 1644139 . - . ID=gene1514;Name=YPTS_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07595;old_locus_tag=YPTS_1482 NC_010634.1 Protein Homology CDS 1643120 1644139 . - 0 ID=cds1452;Parent=gene1514;Dbxref=Genbank:WP_002211362.1;Name=WP_002211362.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_002211362.1;transl_table=11 NC_010634.1 RefSeq gene 1644488 1646209 . - . ID=gene1515;Name=YPTS_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07600;old_locus_tag=YPTS_1483 NC_010634.1 Protein Homology CDS 1644488 1646209 . - 0 ID=cds1453;Parent=gene1515;Dbxref=Genbank:WP_011192046.1;Name=WP_011192046.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_011192046.1;transl_table=11 NC_010634.1 RefSeq gene 1646353 1647375 . - . ID=gene1516;Name=YPTS_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07605;old_locus_tag=YPTS_1484 NC_010634.1 Protein Homology CDS 1646353 1647375 . - 0 ID=cds1454;Parent=gene1516;Dbxref=Genbank:WP_011192047.1;Name=WP_011192047.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_011192047.1;transl_table=11 NC_010634.1 RefSeq gene 1647489 1649141 . - . ID=gene1517;Name=YPTS_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07610;old_locus_tag=YPTS_1485 NC_010634.1 Protein Homology CDS 1647489 1649141 . - 0 ID=cds1455;Parent=gene1517;Dbxref=Genbank:WP_011192048.1;Name=WP_011192048.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_011192048.1;transl_table=11 NC_010634.1 RefSeq gene 1649343 1650239 . - . ID=gene1518;Name=YPTS_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07615;old_locus_tag=YPTS_1486 NC_010634.1 Protein Homology CDS 1649343 1650239 . - 0 ID=cds1456;Parent=gene1518;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11 NC_010634.1 RefSeq gene 1650592 1652259 . + . ID=gene1519;Name=YPTS_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07620;old_locus_tag=YPTS_1487 NC_010634.1 Protein Homology CDS 1650592 1652259 . + 0 ID=cds1457;Parent=gene1519;Dbxref=Genbank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211356.1;transl_table=11 NC_010634.1 RefSeq gene 1652396 1653343 . - . ID=gene1520;Name=YPTS_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07625;old_locus_tag=YPTS_1489 NC_010634.1 Protein Homology CDS 1652396 1653343 . - 0 ID=cds1458;Parent=gene1520;Dbxref=Genbank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211355.1;transl_table=11 NC_010634.1 RefSeq gene 1653580 1654692 . + . ID=gene1521;Name=YPTS_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07630;old_locus_tag=YPTS_1490 NC_010634.1 Protein Homology CDS 1653580 1654692 . + 0 ID=cds1459;Parent=gene1521;Dbxref=Genbank:WP_002216705.1;Name=WP_002216705.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11 NC_010634.1 RefSeq gene 1654692 1656641 . + . ID=gene1522;Name=YPTS_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07635;old_locus_tag=YPTS_1491 NC_010634.1 Protein Homology CDS 1654692 1656641 . + 0 ID=cds1460;Parent=gene1522;Dbxref=Genbank:WP_002211351.1;Name=WP_002211351.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002211351.1;transl_table=11 NC_010634.1 RefSeq gene 1656922 1657185 . - . ID=gene1523;Name=YPTS_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07640;old_locus_tag=YPTS_1492 NC_010634.1 Protein Homology CDS 1656922 1657185 . - 0 ID=cds1461;Parent=gene1523;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11 NC_010634.1 RefSeq gene 1657546 1657866 . + . ID=gene1524;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YPTS_RS07645;old_locus_tag=YPTS_1493 NC_010634.1 Protein Homology CDS 1657546 1657866 . + 0 ID=cds1462;Parent=gene1524;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11 NC_010634.1 RefSeq gene 1657892 1660168 . + . ID=gene1525;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=YPTS_RS07650;old_locus_tag=YPTS_1494 NC_010634.1 Protein Homology CDS 1657892 1660168 . + 0 ID=cds1463;Parent=gene1525;Dbxref=Genbank:WP_011192049.1;Name=WP_011192049.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011192049.1;transl_table=11 NC_010634.1 RefSeq gene 1660581 1660799 . - . ID=gene1526;Name=YPTS_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07655;old_locus_tag=YPTS_1495 NC_010634.1 Protein Homology CDS 1660581 1660799 . - 0 ID=cds1464;Parent=gene1526;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NC_010634.1 RefSeq gene 1660965 1661675 . - . ID=gene1527;Name=YPTS_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07660;old_locus_tag=YPTS_1496 NC_010634.1 Protein Homology CDS 1660965 1661675 . - 0 ID=cds1465;Parent=gene1527;Dbxref=Genbank:WP_002211346.1;Name=WP_002211346.1;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NC_010634.1 RefSeq gene 1661894 1663618 . - . ID=gene1528;Name=YPTS_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07665;old_locus_tag=YPTS_1497 NC_010634.1 Protein Homology CDS 1661894 1663618 . - 0 ID=cds1466;Parent=gene1528;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11 NC_010634.1 RefSeq gene 1663621 1665387 . - . ID=gene1529;Name=YPTS_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07670;old_locus_tag=YPTS_1498 NC_010634.1 Protein Homology CDS 1663621 1665387 . - 0 ID=cds1467;Parent=gene1529;Dbxref=Genbank:WP_012304304.1;Name=WP_012304304.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_012304304.1;transl_table=11 NC_010634.1 RefSeq gene 1665604 1665741 . + . ID=gene1530;Name=YPTS_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07675 NC_010634.1 Protein Homology CDS 1665604 1665741 . + 0 ID=cds1468;Parent=gene1530;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11 NC_010634.1 RefSeq gene 1665846 1666808 . - . ID=gene1531;Name=YPTS_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07680;old_locus_tag=YPTS_1499 NC_010634.1 Protein Homology CDS 1665846 1666808 . - 0 ID=cds1469;Parent=gene1531;Dbxref=Genbank:WP_002211341.1;Name=WP_002211341.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_002211341.1;transl_table=11 NC_010634.1 RefSeq gene 1667576 1668070 . + . ID=gene1532;Name=YPTS_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07685;old_locus_tag=YPTS_1500 NC_010634.1 Protein Homology CDS 1667576 1668070 . + 0 ID=cds1470;Parent=gene1532;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11 NC_010634.1 RefSeq gene 1668193 1672122 . + . ID=gene1533;Name=YPTS_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07690;old_locus_tag=YPTS_1501 NC_010634.1 Protein Homology CDS 1668193 1672122 . + 0 ID=cds1471;Parent=gene1533;Dbxref=Genbank:WP_012413604.1;Name=WP_012413604.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_012413604.1;transl_table=11 NC_010634.1 RefSeq gene 1672312 1672920 . + . ID=gene1534;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YPTS_RS07695;old_locus_tag=YPTS_1502 NC_010634.1 Protein Homology CDS 1672312 1672920 . + 0 ID=cds1472;Parent=gene1534;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11 NC_010634.1 RefSeq gene 1672931 1674274 . + . ID=gene1535;Name=YPTS_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07700;old_locus_tag=YPTS_1503 NC_010634.1 Protein Homology CDS 1672931 1674274 . + 0 ID=cds1473;Parent=gene1535;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11 NC_010634.1 RefSeq gene 1674516 1675808 . + . ID=gene1536;Name=YPTS_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07705;old_locus_tag=YPTS_1505 NC_010634.1 Protein Homology CDS 1674516 1675808 . + 0 ID=cds1474;Parent=gene1536;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NC_010634.1 RefSeq gene 1676055 1677203 . + . ID=gene1537;Name=YPTS_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07710;old_locus_tag=YPTS_1506 NC_010634.1 Protein Homology CDS 1676055 1677203 . + 0 ID=cds1475;Parent=gene1537;Dbxref=Genbank:WP_002211335.1;Name=WP_002211335.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211335.1;transl_table=11 NC_010634.1 RefSeq gene 1677357 1678091 . - . ID=gene1538;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YPTS_RS07715;old_locus_tag=YPTS_1507 NC_010634.1 Protein Homology CDS 1677357 1678091 . - 0 ID=cds1476;Parent=gene1538;Dbxref=Genbank:WP_002211334.1;Name=WP_002211334.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating protein;protein_id=WP_002211334.1;transl_table=11 NC_010634.1 RefSeq gene 1679078 1679752 . + . ID=gene1539;Name=YPTS_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07720;old_locus_tag=YPTS_1508 NC_010634.1 Protein Homology CDS 1679078 1679752 . + 0 ID=cds1477;Parent=gene1539;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11 NC_010634.1 RefSeq gene 1679870 1682152 . - . ID=gene1540;Name=YPTS_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07725;old_locus_tag=YPTS_1509 NC_010634.1 Protein Homology CDS 1679870 1682152 . - 0 ID=cds1478;Parent=gene1540;Dbxref=Genbank:WP_002211332.1;Name=WP_002211332.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=keto-acid formate acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NC_010634.1 RefSeq gene 1682208 1683065 . - . ID=gene1541;Name=YPTS_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07730;old_locus_tag=YPTS_1510 NC_010634.1 Protein Homology CDS 1682208 1683065 . - 0 ID=cds1479;Parent=gene1541;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NC_010634.1 RefSeq gene 1683743 1685509 . - . ID=gene1542;Name=YPTS_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07735;old_locus_tag=YPTS_1511 NC_010634.1 Protein Homology CDS 1683743 1685509 . - 0 ID=cds1480;Parent=gene1542;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11 NC_010634.1 RefSeq gene 1685658 1686695 . + . ID=gene1543;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YPTS_RS07740;old_locus_tag=YPTS_1512 NC_010634.1 Protein Homology CDS 1685658 1686695 . + 0 ID=cds1481;Parent=gene1543;Dbxref=Genbank:WP_011192052.1;Name=WP_011192052.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=WP_011192052.1;transl_table=11 NC_010634.1 RefSeq gene 1687014 1688108 . + . ID=gene1544;Name=YPTS_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07745;old_locus_tag=YPTS_1513 NC_010634.1 Protein Homology CDS 1687014 1688108 . + 0 ID=cds1482;Parent=gene1544;Dbxref=Genbank:WP_012105384.1;Name=WP_012105384.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_012105384.1;transl_table=11 NC_010634.1 RefSeq gene 1688129 1689976 . + . ID=gene1545;Name=YPTS_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07750;old_locus_tag=YPTS_1514 NC_010634.1 Protein Homology CDS 1688129 1689976 . + 0 ID=cds1483;Parent=gene1545;Dbxref=Genbank:WP_012413605.1;Name=WP_012413605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413605.1;transl_table=11 NC_010634.1 RefSeq gene 1690343 1691428 . + . ID=gene1546;Name=YPTS_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07755;old_locus_tag=YPTS_1515 NC_010634.1 Protein Homology CDS 1690343 1691428 . + 0 ID=cds1484;Parent=gene1546;Dbxref=Genbank:WP_011192055.1;Name=WP_011192055.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_011192055.1;transl_table=11 NC_010634.1 RefSeq gene 1691601 1692887 . + . ID=gene1547;Name=YPTS_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07760;old_locus_tag=YPTS_1516 NC_010634.1 Protein Homology CDS 1691601 1692887 . + 0 ID=cds1485;Parent=gene1547;Dbxref=Genbank:WP_011192056.1;Name=WP_011192056.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_011192056.1;transl_table=11 NC_010634.1 RefSeq gene 1693201 1693893 . + . ID=gene1548;Name=YPTS_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07765;old_locus_tag=YPTS_1517 NC_010634.1 Protein Homology CDS 1693201 1693893 . + 0 ID=cds1486;Parent=gene1548;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11 NC_010634.1 RefSeq gene 1694067 1695740 . + . ID=gene1549;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YPTS_RS07770;old_locus_tag=YPTS_1518 NC_010634.1 Protein Homology CDS 1694067 1695740 . + 0 ID=cds1487;Parent=gene1549;Dbxref=Genbank:WP_011192057.1;Name=WP_011192057.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_011192057.1;transl_table=11 NC_010634.1 RefSeq gene 1695801 1696085 . + . ID=gene1550;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YPTS_RS07775;old_locus_tag=YPTS_1519 NC_010634.1 Protein Homology CDS 1695801 1696085 . + 0 ID=cds1488;Parent=gene1550;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NC_010634.1 RefSeq gene 1696632 1698923 . + . ID=gene1551;Name=YPTS_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07780;old_locus_tag=YPTS_1521 NC_010634.1 Protein Homology CDS 1696632 1698923 . + 0 ID=cds1489;Parent=gene1551;Dbxref=Genbank:WP_011192058.1;Name=WP_011192058.1;gbkey=CDS;product=competence protein ComEC;protein_id=WP_011192058.1;transl_table=11 NC_010634.1 RefSeq gene 1698959 1700707 . + . ID=gene1552;Name=YPTS_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07785;old_locus_tag=YPTS_1522 NC_010634.1 Protein Homology CDS 1698959 1700707 . + 0 ID=cds1490;Parent=gene1552;Dbxref=Genbank:WP_002211320.1;Name=WP_002211320.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_002211320.1;transl_table=11 NC_010634.1 RefSeq gene 1700704 1701690 . + . ID=gene1553;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YPTS_RS07790;old_locus_tag=YPTS_1523 NC_010634.1 Protein Homology CDS 1700704 1701690 . + 0 ID=cds1491;Parent=gene1553;Dbxref=Genbank:WP_002211319.1;Name=WP_002211319.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NC_010634.1 RefSeq gene 1701698 1703188 . - . ID=gene1554;Name=YPTS_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07795;old_locus_tag=YPTS_1524 NC_010634.1 Protein Homology CDS 1701698 1703188 . - 0 ID=cds1492;Parent=gene1554;Dbxref=Genbank:WP_012413607.1;Name=WP_012413607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413607.1;transl_table=11 NC_010634.1 RefSeq gene 1703472 1703669 . - . ID=gene1555;Name=YPTS_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07800 NC_010634.1 Protein Homology CDS 1703472 1703669 . - 0 ID=cds1493;Parent=gene1555;Dbxref=Genbank:WP_015683832.1;Name=WP_015683832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683832.1;transl_table=11 NC_010634.1 RefSeq gene 1703907 1704116 . + . ID=gene1556;Name=YPTS_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07805;old_locus_tag=YPTS_1525 NC_010634.1 Protein Homology CDS 1703907 1704116 . + 0 ID=cds1494;Parent=gene1556;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NC_010634.1 RefSeq gene 1704664 1704846 . + . ID=gene1557;Name=YPTS_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07810;old_locus_tag=YPTS_1526 NC_010634.1 Protein Homology CDS 1704664 1704846 . + 0 ID=cds1495;Parent=gene1557;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11 NC_010634.1 RefSeq gene 1704843 1705595 . + . ID=gene1558;Name=YPTS_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07815;old_locus_tag=YPTS_1527 NC_010634.1 Protein Homology CDS 1704843 1705595 . + 0 ID=cds1496;Parent=gene1558;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NC_010634.1 RefSeq gene 1705958 1706851 . + . ID=gene1559;Name=YPTS_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07820;old_locus_tag=YPTS_1528 NC_010634.1 Protein Homology CDS 1705958 1706851 . + 0 ID=cds1497;Parent=gene1559;Dbxref=Genbank:WP_011192060.1;Name=WP_011192060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192060.1;transl_table=11 NC_010634.1 RefSeq gene 1707281 1707433 . - . ID=gene1560;Name=YPTS_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07825 NC_010634.1 Protein Homology CDS 1707281 1707433 . - 0 ID=cds1498;Parent=gene1560;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11 NC_010634.1 RefSeq gene 1707679 1708464 . + . ID=gene1561;Name=YPTS_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07830;old_locus_tag=YPTS_1529 NC_010634.1 Protein Homology CDS 1707679 1708464 . + 0 ID=cds1499;Parent=gene1561;Dbxref=Genbank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_002211311.1;transl_table=11 NC_010634.1 RefSeq gene 1708461 1709783 . + . ID=gene1562;Name=YPTS_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07835;old_locus_tag=YPTS_1530 NC_010634.1 Protein Homology CDS 1708461 1709783 . + 0 ID=cds1500;Parent=gene1562;Dbxref=Genbank:WP_002211310.1;Name=WP_002211310.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NC_010634.1 RefSeq gene 1709764 1710492 . + . ID=gene1563;Name=YPTS_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07840;old_locus_tag=YPTS_1531 NC_010634.1 Protein Homology CDS 1709764 1710492 . + 0 ID=cds1501;Parent=gene1563;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11 NC_010634.1 RefSeq gene 1710489 1714946 . + . ID=gene1564;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YPTS_RS07845;old_locus_tag=YPTS_1532 NC_010634.1 Protein Homology CDS 1710489 1714946 . + 0 ID=cds1502;Parent=gene1564;Dbxref=Genbank:WP_012413608.1;Name=WP_012413608.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_012413608.1;transl_table=11 NC_010634.1 RefSeq gene 1715194 1717050 . + . ID=gene1565;Name=YPTS_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07850;old_locus_tag=YPTS_1533 NC_010634.1 Protein Homology CDS 1715194 1717050 . + 0 ID=cds1503;Parent=gene1565;Dbxref=Genbank:WP_002217987.1;Name=WP_002217987.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002217987.1;transl_table=11 NC_010634.1 RefSeq gene 1717274 1717822 . + . ID=gene1566;Name=YPTS_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07855;old_locus_tag=YPTS_1534 NC_010634.1 Protein Homology CDS 1717274 1717822 . + 0 ID=cds1504;Parent=gene1566;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11 NC_010634.1 RefSeq gene 1717883 1718530 . + . ID=gene1567;Name=YPTS_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07860;old_locus_tag=YPTS_1535 NC_010634.1 Protein Homology CDS 1717883 1718530 . + 0 ID=cds1505;Parent=gene1567;Dbxref=Genbank:WP_011192061.1;Name=WP_011192061.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192061.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1718729 1718900 . + . ID=id117;gbkey=repeat_region NC_010634.1 RefSeq gene 1718954 1720144 . - . ID=gene1568;Name=YPTS_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07865;old_locus_tag=YPTS_1536 NC_010634.1 Protein Homology CDS 1718954 1720144 . - 0 ID=cds1506;Parent=gene1568;Dbxref=Genbank:WP_002211303.1;Name=WP_002211303.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NC_010634.1 RefSeq gene 1720401 1721483 . - . ID=gene1569;Name=YPTS_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07870;old_locus_tag=YPTS_1537 NC_010634.1 Protein Homology CDS 1720401 1721483 . - 0 ID=cds1507;Parent=gene1569;Dbxref=Genbank:WP_012413609.1;Name=WP_012413609.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_012413609.1;transl_table=11 NC_010634.1 RefSeq gene 1721781 1723181 . - . ID=gene1570;Name=YPTS_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07875;old_locus_tag=YPTS_1538 NC_010634.1 Protein Homology CDS 1721781 1723181 . - 0 ID=cds1508;Parent=gene1570;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NC_010634.1 RefSeq gene 1723671 1724876 . - . ID=gene1571;Name=YPTS_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07880;old_locus_tag=YPTS_1539 NC_010634.1 Protein Homology CDS 1723671 1724876 . - 0 ID=cds1509;Parent=gene1571;Dbxref=Genbank:WP_002228013.1;Name=WP_002228013.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NC_010634.1 RefSeq gene 1725592 1728207 . + . ID=gene1572;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YPTS_RS07885;old_locus_tag=YPTS_1541 NC_010634.1 Protein Homology CDS 1725592 1728207 . + 0 ID=cds1510;Parent=gene1572;Dbxref=Genbank:WP_012413610.1;Name=WP_012413610.1;gbkey=CDS;gene=pepN;product=aminopeptidase N;protein_id=WP_012413610.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1728444 1729762 . + . ID=id118;gbkey=repeat_region NC_010634.1 RefSeq gene 1728482 1729690 . - . ID=gene1573;Name=YPTS_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07890;old_locus_tag=YPTS_1542 NC_010634.1 Protein Homology CDS 1728482 1729690 . - 0 ID=cds1511;Parent=gene1573;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_010634.1 RefSeq gene 1730166 1731176 . + . ID=gene1574;Name=YPTS_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07895;old_locus_tag=YPTS_1543 NC_010634.1 Protein Homology CDS 1730166 1731176 . + 0 ID=cds1512;Parent=gene1574;Dbxref=Genbank:WP_002211296.1;Name=WP_002211296.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11 NC_010634.1 RefSeq gene 1731359 1731910 . + . ID=gene1575;Name=YPTS_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07900;old_locus_tag=YPTS_1544 NC_010634.1 Protein Homology CDS 1731359 1731910 . + 0 ID=cds1513;Parent=gene1575;Dbxref=Genbank:WP_011192064.1;Name=WP_011192064.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_011192064.1;transl_table=11 NC_010634.1 RefSeq gene 1731936 1733045 . - . ID=gene1576;Name=YPTS_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07905;old_locus_tag=YPTS_1545 NC_010634.1 Protein Homology CDS 1731936 1733045 . - 0 ID=cds1514;Parent=gene1576;Dbxref=Genbank:WP_002363919.1;Name=WP_002363919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002363919.1;transl_table=11 NC_010634.1 RefSeq gene 1733148 1735268 . + . ID=gene1577;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=YPTS_RS07910;old_locus_tag=YPTS_1546 NC_010634.1 Protein Homology CDS 1733148 1735268 . + 0 ID=cds1515;Parent=gene1577;Dbxref=Genbank:WP_012413611.1;Name=WP_012413611.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_012413611.1;transl_table=11 NC_010634.1 RefSeq gene 1735274 1737187 . + . ID=gene1578;Name=YPTS_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07915;old_locus_tag=YPTS_1547 NC_010634.1 Protein Homology CDS 1735274 1737187 . + 0 ID=cds1516;Parent=gene1578;Dbxref=Genbank:WP_012413612.1;Name=WP_012413612.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_012413612.1;transl_table=11 NC_010634.1 RefSeq gene 1737385 1738602 . + . ID=gene1579;Name=YPTS_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07920;old_locus_tag=YPTS_1548 NC_010634.1 Protein Homology CDS 1737385 1738602 . + 0 ID=cds1517;Parent=gene1579;Dbxref=Genbank:WP_002354008.1;Name=WP_002354008.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_002354008.1;transl_table=11 NC_010634.1 RefSeq gene 1738589 1740241 . + . ID=gene1580;Name=YPTS_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07925;old_locus_tag=YPTS_1549 NC_010634.1 Protein Homology CDS 1738589 1740241 . + 0 ID=cds1518;Parent=gene1580;Dbxref=Genbank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_002211290.1;transl_table=11 NC_010634.1 RefSeq gene 1740238 1740798 . + . ID=gene1581;Name=YPTS_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07930;old_locus_tag=YPTS_1550 NC_010634.1 Protein Homology CDS 1740238 1740798 . + 0 ID=cds1519;Parent=gene1581;Dbxref=Genbank:WP_012413613.1;Name=WP_012413613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413613.1;transl_table=11 NC_010634.1 RefSeq gene 1740847 1740987 . + . ID=gene1582;Name=YPTS_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07935 NC_010634.1 Protein Homology CDS 1740847 1740987 . + 0 ID=cds1520;Parent=gene1582;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11 NC_010634.1 RefSeq gene 1741068 1741235 . + . ID=gene1583;Name=YPTS_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07940;old_locus_tag=YPTS_1551 NC_010634.1 Protein Homology CDS 1741068 1741235 . + 0 ID=cds1521;Parent=gene1583;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1741288 1741999 . + . ID=id119;gbkey=repeat_region NC_010634.1 RefSeq gene 1741288 1741443 . + . ID=gene1584;Name=YPTS_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07945;old_locus_tag=YPTS_1552 NC_010634.1 Protein Homology CDS 1741288 1741443 . + 0 ID=cds1522;Parent=gene1584;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_010634.1 RefSeq gene 1741433 1741891 . + . ID=gene1585;Name=YPTS_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07950;old_locus_tag=YPTS_1553 NC_010634.1 Protein Homology CDS 1741433 1741891 . + 0 ID=cds1523;Parent=gene1585;Dbxref=Genbank:WP_012413614.1;Name=WP_012413614.1;gbkey=CDS;product=transposase;protein_id=WP_012413614.1;transl_table=11 NC_010634.1 RefSeq gene 1742007 1743281 . - . ID=gene1586;Name=YPTS_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07955;old_locus_tag=YPTS_1554 NC_010634.1 Protein Homology CDS 1742007 1743281 . - 0 ID=cds1524;Parent=gene1586;Dbxref=Genbank:WP_012413615.1;Name=WP_012413615.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_012413615.1;transl_table=11 NC_010634.1 RefSeq gene 1743527 1743715 . + . ID=gene1587;Name=YPTS_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07960;old_locus_tag=YPTS_1555 NC_010634.1 Protein Homology CDS 1743527 1743715 . + 0 ID=cds1525;Parent=gene1587;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11 NC_010634.1 RefSeq gene 1743981 1744499 . - . ID=gene1588;Name=YPTS_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07965;old_locus_tag=YPTS_1556 NC_010634.1 Protein Homology CDS 1743981 1744499 . - 0 ID=cds1526;Parent=gene1588;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11 NC_010634.1 RefSeq gene 1744568 1746319 . - . ID=gene1589;Name=YPTS_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07970;old_locus_tag=YPTS_1557 NC_010634.1 Protein Homology CDS 1744568 1746319 . - 0 ID=cds1527;Parent=gene1589;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11 NC_010634.1 RefSeq gene 1746530 1746985 . + . ID=gene1590;Name=YPTS_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07975;old_locus_tag=YPTS_1558 NC_010634.1 Protein Homology CDS 1746530 1746985 . + 0 ID=cds1528;Parent=gene1590;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11 NC_010634.1 RefSeq gene 1747091 1748152 . - . ID=gene1591;Name=YPTS_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07980;old_locus_tag=YPTS_1559 NC_010634.1 Protein Homology CDS 1747091 1748152 . - 0 ID=cds1529;Parent=gene1591;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11 NC_010634.1 RefSeq gene 1748510 1749016 . - . ID=gene1592;Name=YPTS_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07985;old_locus_tag=YPTS_1560 NC_010634.1 Protein Homology CDS 1748510 1749016 . - 0 ID=cds1530;Parent=gene1592;Dbxref=Genbank:WP_002213065.1;Name=WP_002213065.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_002213065.1;transl_table=11 NC_010634.1 RefSeq gene 1749245 1749880 . + . ID=gene1593;Name=YPTS_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07990;old_locus_tag=YPTS_1561 NC_010634.1 Protein Homology CDS 1749245 1749880 . + 0 ID=cds1531;Parent=gene1593;Dbxref=Genbank:WP_012413616.1;Name=WP_012413616.1;gbkey=CDS;product=competence-specific genes regulator;protein_id=WP_012413616.1;transl_table=11 NC_010634.1 RefSeq gene 1749982 1752120 . - . ID=gene1594;Name=YPTS_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS07995;old_locus_tag=YPTS_1562 NC_010634.1 Protein Homology CDS 1749982 1752120 . - 0 ID=cds1532;Parent=gene1594;Dbxref=Genbank:WP_011192070.1;Name=WP_011192070.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192070.1;transl_table=11 NC_010634.1 RefSeq gene 1752150 1752596 . - . ID=gene1595;Name=YPTS_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08000;old_locus_tag=YPTS_1563 NC_010634.1 Protein Homology CDS 1752150 1752596 . - 0 ID=cds1533;Parent=gene1595;Dbxref=Genbank:WP_011192071.1;Name=WP_011192071.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192071.1;transl_table=11 NC_010634.1 RefSeq gene 1752790 1754844 . + . ID=gene1596;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YPTS_RS08005;old_locus_tag=YPTS_1564 NC_010634.1 Protein Homology CDS 1752790 1754844 . + 0 ID=cds1534;Parent=gene1596;Dbxref=Genbank:WP_011192072.1;Name=WP_011192072.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_011192072.1;transl_table=11 NC_010634.1 RefSeq gene 1754905 1755369 . - . ID=gene1597;Name=YPTS_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08010;old_locus_tag=YPTS_1565 NC_010634.1 Protein Homology CDS 1754905 1755369 . - 0 ID=cds1535;Parent=gene1597;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NC_010634.1 RefSeq gene 1755548 1756228 . - . ID=gene1598;Name=YPTS_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08015;old_locus_tag=YPTS_1566 NC_010634.1 Protein Homology CDS 1755548 1756228 . - 0 ID=cds1536;Parent=gene1598;Dbxref=Genbank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213058.1;transl_table=11 NC_010634.1 RefSeq gene 1756544 1756960 . + . ID=gene1599;Name=YPTS_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08020;old_locus_tag=YPTS_1567 NC_010634.1 Protein Homology CDS 1756544 1756960 . + 0 ID=cds1537;Parent=gene1599;Dbxref=Genbank:WP_002213056.1;Name=WP_002213056.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213056.1;transl_table=11 NC_010634.1 RefSeq gene 1757069 1757386 . - . ID=gene1600;Name=YPTS_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08025;old_locus_tag=YPTS_1568 NC_010634.1 Protein Homology CDS 1757069 1757386 . - 0 ID=cds1538;Parent=gene1600;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NC_010634.1 RefSeq gene 1757447 1758637 . - . ID=gene1601;Name=YPTS_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08030;old_locus_tag=YPTS_1569 NC_010634.1 Protein Homology CDS 1757447 1758637 . - 0 ID=cds1539;Parent=gene1601;Dbxref=Genbank:WP_002213052.1;Name=WP_002213052.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_002213052.1;transl_table=11 NC_010634.1 RefSeq gene 1758731 1759009 . + . ID=gene1602;Name=YPTS_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08035;old_locus_tag=YPTS_1570 NC_010634.1 Protein Homology CDS 1758731 1759009 . + 0 ID=cds1540;Parent=gene1602;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NC_010634.1 RefSeq gene 1759061 1759390 . - . ID=gene1603;Name=YPTS_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08040;old_locus_tag=YPTS_1571 NC_010634.1 Protein Homology CDS 1759061 1759390 . - 0 ID=cds1541;Parent=gene1603;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NC_010634.1 RefSeq gene 1759631 1759718 . + . ID=gene1604;Name=YPTS_RS08045;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS08045;old_locus_tag=YPTS_R0036 NC_010634.1 tRNAscan-SE tRNA 1759631 1759718 . + . ID=rna57;Parent=gene1604;anticodon=(pos:1759665..1759667);gbkey=tRNA;product=tRNA-Ser NC_010634.1 tRNAscan-SE exon 1759631 1759718 . + . ID=id120;Parent=rna57;anticodon=(pos:1759665..1759667);gbkey=tRNA;product=tRNA-Ser NC_010634.1 RefSeq gene 1760137 1760424 . + . ID=gene1605;Name=YPTS_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08050;old_locus_tag=YPTS_1573 NC_010634.1 Protein Homology CDS 1760137 1760424 . + 0 ID=cds1542;Parent=gene1605;Dbxref=Genbank:WP_012413617.1;Name=WP_012413617.1;gbkey=CDS;product=integrase;protein_id=WP_012413617.1;transl_table=11 NC_010634.1 RefSeq gene 1760794 1761147 . + . ID=gene1606;Name=YPTS_RS08055;end_range=1761147,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS08055;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 1760794 1761147 . + 0 ID=cds1543;Parent=gene1606;end_range=1761147,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=cytotoxic necrotizing factor;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1761184 1761435 . + . ID=gene1607;Name=YPTS_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08060 NC_010634.1 Protein Homology CDS 1761184 1761435 . + 0 ID=cds1544;Parent=gene1607;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11 NC_010634.1 RefSeq gene 1761450 1762280 . + . ID=gene1608;Name=YPTS_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08065 NC_010634.1 Protein Homology CDS 1761450 1762280 . + 0 ID=cds1545;Parent=gene1608;Dbxref=Genbank:WP_032467130.1;Name=WP_032467130.1;gbkey=CDS;product=cytotoxic necrotizing factor;protein_id=WP_032467130.1;transl_table=11 NC_010634.1 RefSeq gene 1762714 1765131 . - . ID=gene1609;Name=YPTS_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08070;old_locus_tag=YPTS_1576 NC_010634.1 Protein Homology CDS 1762714 1765131 . - 0 ID=cds1546;Parent=gene1609;Dbxref=Genbank:WP_011192073.1;Name=WP_011192073.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_011192073.1;transl_table=11 NC_010634.1 RefSeq gene 1765285 1766031 . - . ID=gene1610;Name=YPTS_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08075;old_locus_tag=YPTS_1577 NC_010634.1 Protein Homology CDS 1765285 1766031 . - 0 ID=cds1547;Parent=gene1610;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11 NC_010634.1 RefSeq gene 1766762 1766980 . + . ID=gene1611;Name=YPTS_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08080 NC_010634.1 Protein Homology CDS 1766762 1766980 . + 0 ID=cds1548;Parent=gene1611;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NC_010634.1 RefSeq gene 1767244 1767768 . + . ID=gene1612;Name=YPTS_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08085;old_locus_tag=YPTS_1579 NC_010634.1 Protein Homology CDS 1767244 1767768 . + 0 ID=cds1549;Parent=gene1612;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11 NC_010634.1 RefSeq gene 1767758 1769041 . + . ID=gene1613;Name=YPTS_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08090;old_locus_tag=YPTS_1580 NC_010634.1 Protein Homology CDS 1767758 1769041 . + 0 ID=cds1550;Parent=gene1613;Dbxref=Genbank:WP_011192074.1;Name=WP_011192074.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_011192074.1;transl_table=11 NC_010634.1 RefSeq gene 1769043 1769780 . + . ID=gene1614;Name=YPTS_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08095;old_locus_tag=YPTS_1581 NC_010634.1 Protein Homology CDS 1769043 1769780 . + 0 ID=cds1551;Parent=gene1614;Dbxref=Genbank:WP_012105362.1;Name=WP_012105362.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_012105362.1;transl_table=11 NC_010634.1 RefSeq gene 1769796 1771034 . + . ID=gene1615;Name=YPTS_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08100;old_locus_tag=YPTS_1582 NC_010634.1 Protein Homology CDS 1769796 1771034 . + 0 ID=cds1552;Parent=gene1615;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11 NC_010634.1 RefSeq gene 1771027 1771746 . + . ID=gene1616;Name=YPTS_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08105;old_locus_tag=YPTS_1583 NC_010634.1 Protein Homology CDS 1771027 1771746 . + 0 ID=cds1553;Parent=gene1616;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11 NC_010634.1 RefSeq gene 1771748 1772500 . + . ID=gene1617;Name=YPTS_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08110;old_locus_tag=YPTS_1584 NC_010634.1 Protein Homology CDS 1771748 1772500 . + 0 ID=cds1554;Parent=gene1617;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11 NC_010634.1 RefSeq gene 1772503 1773291 . + . ID=gene1618;Name=YPTS_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08115;old_locus_tag=YPTS_1585 NC_010634.1 Protein Homology CDS 1772503 1773291 . + 0 ID=cds1555;Parent=gene1618;Dbxref=Genbank:WP_002213024.1;Name=WP_002213024.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002213024.1;transl_table=11 NC_010634.1 RefSeq gene 1773486 1773818 . + . ID=gene1619;Name=YPTS_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08120;old_locus_tag=YPTS_1586 NC_010634.1 Protein Homology CDS 1773486 1773818 . + 0 ID=cds1556;Parent=gene1619;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11 NC_010634.1 RefSeq gene 1773856 1774104 . + . ID=gene1620;Name=YPTS_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08125;old_locus_tag=YPTS_1587 NC_010634.1 Protein Homology CDS 1773856 1774104 . + 0 ID=cds1557;Parent=gene1620;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11 NC_010634.1 RefSeq gene 1774203 1775051 . + . ID=gene1621;Name=YPTS_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08130;old_locus_tag=YPTS_1588 NC_010634.1 Protein Homology CDS 1774203 1775051 . + 0 ID=cds1558;Parent=gene1621;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11 NC_010634.1 RefSeq gene 1775107 1775349 . + . ID=gene1622;Name=YPTS_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08135;old_locus_tag=YPTS_1589 NC_010634.1 Protein Homology CDS 1775107 1775349 . + 0 ID=cds1559;Parent=gene1622;Dbxref=Genbank:WP_012413618.1;Name=WP_012413618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413618.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1775587 1782470 . + . ID=id121;gbkey=repeat_region NC_010634.1 RefSeq gene 1776014 1776514 . + . ID=gene1623;Name=YPTS_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08140;old_locus_tag=YPTS_1590 NC_010634.1 Protein Homology CDS 1776014 1776514 . + 0 ID=cds1560;Parent=gene1623;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_010634.1 RefSeq gene 1776557 1778107 . + . ID=gene1624;Name=YPTS_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08145;old_locus_tag=YPTS_1591 NC_010634.1 Protein Homology CDS 1776557 1778107 . + 0 ID=cds1561;Parent=gene1624;Dbxref=Genbank:WP_011192076.1;Name=WP_011192076.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192076.1;transl_table=11 NC_010634.1 RefSeq gene 1778119 1779471 . + . ID=gene1625;Name=YPTS_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08150;old_locus_tag=YPTS_1592 NC_010634.1 Protein Homology CDS 1778119 1779471 . + 0 ID=cds1562;Parent=gene1625;Dbxref=Genbank:WP_011192077.1;Name=WP_011192077.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192077.1;transl_table=11 NC_010634.1 RefSeq gene 1779468 1780154 . + . ID=gene1626;Name=YPTS_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08155;old_locus_tag=YPTS_1593 NC_010634.1 Protein Homology CDS 1779468 1780154 . + 0 ID=cds1563;Parent=gene1626;Dbxref=Genbank:WP_011192078.1;Name=WP_011192078.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192078.1;transl_table=11 NC_010634.1 RefSeq gene 1780154 1781899 . + . ID=gene1627;Name=YPTS_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08160;old_locus_tag=YPTS_1594 NC_010634.1 Protein Homology CDS 1780154 1781899 . + 0 ID=cds1564;Parent=gene1627;Dbxref=Genbank:WP_012413620.1;Name=WP_012413620.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413620.1;transl_table=11 NC_010634.1 RefSeq gene 1781903 1782394 . + . ID=gene1628;Name=YPTS_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08165;old_locus_tag=YPTS_1595 NC_010634.1 Protein Homology CDS 1781903 1782394 . + 0 ID=cds1565;Parent=gene1628;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1782763 1787699 . + . ID=id122;gbkey=repeat_region NC_010634.1 RefSeq gene 1782782 1785430 . + . ID=gene1629;Name=YPTS_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08170;old_locus_tag=YPTS_1596 NC_010634.1 Protein Homology CDS 1782782 1785430 . + 0 ID=cds1566;Parent=gene1629;Dbxref=Genbank:WP_012413621.1;Name=WP_012413621.1;gbkey=CDS;product=ATPase;protein_id=WP_012413621.1;transl_table=11 NC_010634.1 RefSeq gene 1785427 1787925 . + . ID=gene1630;Name=YPTS_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08175;old_locus_tag=YPTS_1597 NC_010634.1 Protein Homology CDS 1785427 1787925 . + 0 ID=cds1567;Parent=gene1630;Dbxref=Genbank:WP_012413622.1;Name=WP_012413622.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012413622.1;transl_table=11 NC_010634.1 RefSeq gene 1788043 1789314 . + . ID=gene1631;Name=YPTS_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08180;old_locus_tag=YPTS_1598 NC_010634.1 Protein Homology CDS 1788043 1789314 . + 0 ID=cds1568;Parent=gene1631;Dbxref=Genbank:WP_011192081.1;Name=WP_011192081.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192081.1;transl_table=11 NC_010634.1 RefSeq gene 1789318 1789713 . + . ID=gene1632;Name=YPTS_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08185;old_locus_tag=YPTS_1599 NC_010634.1 Protein Homology CDS 1789318 1789713 . + 0 ID=cds1569;Parent=gene1632;Dbxref=Genbank:WP_032467135.1;Name=WP_032467135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467135.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1790025 1791987 . + . ID=id123;gbkey=repeat_region NC_010634.1 RefSeq gene 1790029 1792731 . + . ID=gene1633;Name=YPTS_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08190;old_locus_tag=YPTS_1600 NC_010634.1 Protein Homology CDS 1790029 1792731 . + 0 ID=cds1570;Parent=gene1633;Dbxref=Genbank:WP_012413624.1;Name=WP_012413624.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012413624.1;transl_table=11 NC_010634.1 RefSeq gene 1792734 1793150 . + . ID=gene1634;Name=YPTS_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08195;old_locus_tag=YPTS_1601 NC_010634.1 Protein Homology CDS 1792734 1793150 . + 0 ID=cds1571;Parent=gene1634;Dbxref=Genbank:WP_011192084.1;Name=WP_011192084.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192084.1;transl_table=11 NC_010634.1 RefSeq gene 1793159 1794907 . + . ID=gene1635;Name=YPTS_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08200;old_locus_tag=YPTS_1602 NC_010634.1 Protein Homology CDS 1793159 1794907 . + 0 ID=cds1572;Parent=gene1635;Dbxref=Genbank:WP_011192085.1;Name=WP_011192085.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_011192085.1;transl_table=11 NC_010634.1 RefSeq gene 1794912 1795424 . + . ID=gene1636;Name=YPTS_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08205;old_locus_tag=YPTS_1603 NC_010634.1 Protein Homology CDS 1794912 1795424 . + 0 ID=cds1573;Parent=gene1636;Dbxref=Genbank:WP_011192086.1;Name=WP_011192086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192086.1;transl_table=11 NC_010634.1 RefSeq gene 1796204 1797436 . + . ID=gene1637;Name=YPTS_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08210;old_locus_tag=YPTS_1605 NC_010634.1 Protein Homology CDS 1796204 1797436 . + 0 ID=cds1574;Parent=gene1637;Dbxref=Genbank:WP_012413625.1;Name=WP_012413625.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413625.1;transl_table=11 NC_010634.1 RefSeq gene 1797433 1800855 . + . ID=gene1638;Name=YPTS_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08215;old_locus_tag=YPTS_1606 NC_010634.1 Protein Homology CDS 1797433 1800855 . + 0 ID=cds1575;Parent=gene1638;Dbxref=Genbank:WP_011192088.1;Name=WP_011192088.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_011192088.1;transl_table=11 NC_010634.1 RefSeq gene 1800899 1802500 . + . ID=gene1639;Name=YPTS_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08220;old_locus_tag=YPTS_1607 NC_010634.1 Protein Homology CDS 1800899 1802500 . + 0 ID=cds1576;Parent=gene1639;Dbxref=Genbank:WP_011192089.1;Name=WP_011192089.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192089.1;transl_table=11 NC_010634.1 RefSeq gene 1802518 1803576 . + . ID=gene1640;Name=YPTS_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08225;old_locus_tag=YPTS_1608 NC_010634.1 Protein Homology CDS 1802518 1803576 . + 0 ID=cds1577;Parent=gene1640;Dbxref=Genbank:WP_011192090.1;Name=WP_011192090.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192090.1;transl_table=11 NC_010634.1 RefSeq gene 1803591 1804046 . + . ID=gene1641;Name=YPTS_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08230;old_locus_tag=YPTS_1609 NC_010634.1 Protein Homology CDS 1803591 1804046 . + 0 ID=cds1578;Parent=gene1641;Dbxref=Genbank:WP_002211939.1;Name=WP_002211939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211939.1;transl_table=11 NC_010634.1 RefSeq gene 1804267 1806030 . + . ID=gene1642;Name=YPTS_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08235;old_locus_tag=YPTS_1610 NC_010634.1 Protein Homology CDS 1804267 1806030 . + 0 ID=cds1579;Parent=gene1642;Dbxref=Genbank:WP_011192091.1;Name=WP_011192091.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_011192091.1;transl_table=11 NC_010634.1 RefSeq gene 1805994 1807079 . + . ID=gene1643;Name=YPTS_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08240;old_locus_tag=YPTS_1611 NC_010634.1 Protein Homology CDS 1805994 1807079 . + 0 ID=cds1580;Parent=gene1643;Dbxref=Genbank:WP_012413626.1;Name=WP_012413626.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413626.1;transl_table=11 NC_010634.1 RefSeq gene 1807054 1807635 . + . ID=gene1644;Name=YPTS_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08245;old_locus_tag=YPTS_1612 NC_010634.1 Protein Homology CDS 1807054 1807635 . + 0 ID=cds1581;Parent=gene1644;Dbxref=Genbank:WP_012105342.1;Name=WP_012105342.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_012105342.1;transl_table=11 NC_010634.1 RefSeq gene 1807635 1808087 . + . ID=gene1645;Name=YPTS_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08250;old_locus_tag=YPTS_1613 NC_010634.1 Protein Homology CDS 1807635 1808087 . + 0 ID=cds1582;Parent=gene1645;Dbxref=Genbank:WP_011192093.1;Name=WP_011192093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192093.1;transl_table=11 NC_010634.1 RefSeq gene 1808111 1809478 . + . ID=gene1646;Name=YPTS_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08255;old_locus_tag=YPTS_1614 NC_010634.1 Protein Homology CDS 1808111 1809478 . + 0 ID=cds1583;Parent=gene1646;Dbxref=Genbank:WP_012413627.1;Name=WP_012413627.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413627.1;transl_table=11 NC_010634.1 RefSeq gene 1809690 1810313 . - . ID=gene1647;Name=YPTS_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08260;old_locus_tag=YPTS_1615 NC_010634.1 Protein Homology CDS 1809690 1810313 . - 0 ID=cds1584;Parent=gene1647;Dbxref=Genbank:WP_012413628.1;Name=WP_012413628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413628.1;transl_table=11 NC_010634.1 RefSeq gene 1811020 1812591 . + . ID=gene1648;Name=YPTS_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08265;old_locus_tag=YPTS_1616 NC_010634.1 Protein Homology CDS 1811020 1812591 . + 0 ID=cds1585;Parent=gene1648;Dbxref=Genbank:WP_032466234.1;Name=WP_032466234.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_032466234.1;transl_table=11 NC_010634.1 RefSeq gene 1812819 1813466 . + . ID=gene1649;Name=YPTS_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08270;old_locus_tag=YPTS_1617 NC_010634.1 Protein Homology CDS 1812819 1813466 . + 0 ID=cds1586;Parent=gene1649;Dbxref=Genbank:WP_012413629.1;Name=WP_012413629.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413629.1;transl_table=11 NC_010634.1 RefSeq gene 1813538 1814308 . - . ID=gene1650;Name=YPTS_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08275;old_locus_tag=YPTS_1618 NC_010634.1 Protein Homology CDS 1813538 1814308 . - 0 ID=cds1587;Parent=gene1650;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11 NC_010634.1 RefSeq gene 1814310 1815584 . - . ID=gene1651;Name=YPTS_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08280;old_locus_tag=YPTS_1619 NC_010634.1 Protein Homology CDS 1814310 1815584 . - 0 ID=cds1588;Parent=gene1651;Dbxref=Genbank:WP_012105337.1;Name=WP_012105337.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_012105337.1;transl_table=11 NC_010634.1 RefSeq gene 1816119 1817429 . - . ID=gene1652;Name=YPTS_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08285;old_locus_tag=YPTS_1621 NC_010634.1 Protein Homology CDS 1816119 1817429 . - 0 ID=cds1589;Parent=gene1652;Dbxref=Genbank:WP_011192099.1;Name=WP_011192099.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_011192099.1;transl_table=11 NC_010634.1 RefSeq gene 1817439 1818107 . - . ID=gene1653;Name=YPTS_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08290;old_locus_tag=YPTS_1622 NC_010634.1 Protein Homology CDS 1817439 1818107 . - 0 ID=cds1590;Parent=gene1653;Dbxref=Genbank:WP_011192100.1;Name=WP_011192100.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_011192100.1;transl_table=11 NC_010634.1 RefSeq gene 1818109 1819371 . - . ID=gene1654;Name=YPTS_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08295;old_locus_tag=YPTS_1623 NC_010634.1 Protein Homology CDS 1818109 1819371 . - 0 ID=cds1591;Parent=gene1654;Dbxref=Genbank:WP_011192101.1;Name=WP_011192101.1;gbkey=CDS;product=RND transporter;protein_id=WP_011192101.1;transl_table=11 NC_010634.1 RefSeq gene 1819373 1821733 . - . ID=gene1655;Name=YPTS_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08300;old_locus_tag=YPTS_1624 NC_010634.1 Protein Homology CDS 1819373 1821733 . - 0 ID=cds1592;Parent=gene1655;Dbxref=Genbank:WP_011192102.1;Name=WP_011192102.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192102.1;transl_table=11 NC_010634.1 RefSeq gene 1821817 1822017 . - . ID=gene1656;Name=YPTS_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08305;old_locus_tag=YPTS_1625 NC_010634.1 Protein Homology CDS 1821817 1822017 . - 0 ID=cds1593;Parent=gene1656;Dbxref=Genbank:WP_002211954.1;Name=WP_002211954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211954.1;transl_table=11 NC_010634.1 RefSeq gene 1822286 1823128 . - . ID=gene1657;Name=YPTS_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08310;old_locus_tag=YPTS_1626 NC_010634.1 Protein Homology CDS 1822286 1823128 . - 0 ID=cds1594;Parent=gene1657;Dbxref=Genbank:WP_011192103.1;Name=WP_011192103.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_011192103.1;transl_table=11 NC_010634.1 RefSeq gene 1823149 1824288 . - . ID=gene1658;Name=YPTS_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08315;old_locus_tag=YPTS_1627 NC_010634.1 Protein Homology CDS 1823149 1824288 . - 0 ID=cds1595;Parent=gene1658;Dbxref=Genbank:WP_002224699.1;Name=WP_002224699.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002224699.1;transl_table=11 NC_010634.1 RefSeq gene 1824561 1825430 . - . ID=gene1659;Name=YPTS_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08320;old_locus_tag=YPTS_1628 NC_010634.1 Protein Homology CDS 1824561 1825430 . - 0 ID=cds1596;Parent=gene1659;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11 NC_010634.1 RefSeq gene 1825566 1826717 . + . ID=gene1660;Name=YPTS_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08325;old_locus_tag=YPTS_1629 NC_010634.1 Protein Homology CDS 1825566 1826717 . + 0 ID=cds1597;Parent=gene1660;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11 NC_010634.1 RefSeq gene 1826901 1827563 . + . ID=gene1661;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YPTS_RS08330;old_locus_tag=YPTS_1630 NC_010634.1 Protein Homology CDS 1826901 1827563 . + 0 ID=cds1598;Parent=gene1661;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11 NC_010634.1 RefSeq gene 1827618 1828784 . + . ID=gene1662;Name=YPTS_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08335;old_locus_tag=YPTS_1631 NC_010634.1 Protein Homology CDS 1827618 1828784 . + 0 ID=cds1599;Parent=gene1662;Dbxref=Genbank:WP_012413631.1;Name=WP_012413631.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413631.1;transl_table=11 NC_010634.1 RefSeq gene 1829532 1830524 . + . ID=gene1663;Name=YPTS_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08340;old_locus_tag=YPTS_1632 NC_010634.1 Protein Homology CDS 1829532 1830524 . + 0 ID=cds1600;Parent=gene1663;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11 NC_010634.1 RefSeq gene 1830754 1832274 . + . ID=gene1664;Name=YPTS_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08345;old_locus_tag=YPTS_1633 NC_010634.1 Protein Homology CDS 1830754 1832274 . + 0 ID=cds1601;Parent=gene1664;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NC_010634.1 RefSeq gene 1832295 1833305 . + . ID=gene1665;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YPTS_RS08350;old_locus_tag=YPTS_1634 NC_010634.1 Protein Homology CDS 1832295 1833305 . + 0 ID=cds1602;Parent=gene1665;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11 NC_010634.1 RefSeq gene 1833750 1834487 . - . ID=gene1666;Name=YPTS_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08355;old_locus_tag=YPTS_1635 NC_010634.1 Protein Homology CDS 1833750 1834487 . - 0 ID=cds1603;Parent=gene1666;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11 NC_010634.1 RefSeq gene 1834768 1836465 . - . ID=gene1667;Name=YPTS_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08360;old_locus_tag=YPTS_1636 NC_010634.1 Protein Homology CDS 1834768 1836465 . - 0 ID=cds1604;Parent=gene1667;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NC_010634.1 RefSeq gene 1836821 1837705 . - . ID=gene1668;Name=YPTS_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08365;old_locus_tag=YPTS_1637 NC_010634.1 Protein Homology CDS 1836821 1837705 . - 0 ID=cds1605;Parent=gene1668;Dbxref=Genbank:WP_011192106.1;Name=WP_011192106.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_011192106.1;transl_table=11 NC_010634.1 RefSeq gene 1838031 1838726 . - . ID=gene1669;Name=YPTS_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08370;old_locus_tag=YPTS_1638 NC_010634.1 Protein Homology CDS 1838031 1838726 . - 0 ID=cds1606;Parent=gene1669;Dbxref=Genbank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211970.1;transl_table=11 NC_010634.1 RefSeq gene 1838723 1839130 . - . ID=gene1670;Name=YPTS_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08375;old_locus_tag=YPTS_1639 NC_010634.1 Protein Homology CDS 1838723 1839130 . - 0 ID=cds1607;Parent=gene1670;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11 NC_010634.1 RefSeq gene 1839372 1840553 . - . ID=gene1671;Name=YPTS_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08380;old_locus_tag=YPTS_1640 NC_010634.1 Protein Homology CDS 1839372 1840553 . - 0 ID=cds1608;Parent=gene1671;Dbxref=Genbank:WP_002211973.1;Name=WP_002211973.1;gbkey=CDS;product=multidrug resistance protein;protein_id=WP_002211973.1;transl_table=11 NC_010634.1 RefSeq gene 1840905 1842158 . - . ID=gene1672;Name=YPTS_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08385;old_locus_tag=YPTS_1641 NC_010634.1 Protein Homology CDS 1840905 1842158 . - 0 ID=cds1609;Parent=gene1672;Dbxref=Genbank:WP_011192108.1;Name=WP_011192108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192108.1;transl_table=11 NC_010634.1 RefSeq gene 1842176 1843252 . - . ID=gene1673;Name=YPTS_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08390;old_locus_tag=YPTS_1642 NC_010634.1 Protein Homology CDS 1842176 1843252 . - 0 ID=cds1610;Parent=gene1673;Dbxref=Genbank:WP_012105330.1;Name=WP_012105330.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_012105330.1;transl_table=11 NC_010634.1 RefSeq gene 1843954 1844616 . + . ID=gene1674;Name=YPTS_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08395 NC_010634.1 Protein Homology CDS 1843954 1844616 . + 0 ID=cds1611;Parent=gene1674;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11 NC_010634.1 RefSeq gene 1844745 1846772 . - . ID=gene1675;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YPTS_RS08400;old_locus_tag=YPTS_1644 NC_010634.1 Protein Homology CDS 1844745 1846772 . - 0 ID=cds1612;Parent=gene1675;Dbxref=Genbank:WP_012413632.1;Name=WP_012413632.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_012413632.1;transl_table=11 NC_010634.1 RefSeq gene 1847037 1848149 . + . ID=gene1676;Name=YPTS_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08405;old_locus_tag=YPTS_1645 NC_010634.1 Protein Homology CDS 1847037 1848149 . + 0 ID=cds1613;Parent=gene1676;Dbxref=Genbank:WP_002211871.1;Name=WP_002211871.1;gbkey=CDS;product=ATPase;protein_id=WP_002211871.1;transl_table=11 NC_010634.1 RefSeq gene 1848394 1849035 . + . ID=gene1677;Name=YPTS_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08410;old_locus_tag=YPTS_1646 NC_010634.1 Protein Homology CDS 1848394 1849035 . + 0 ID=cds1614;Parent=gene1677;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NC_010634.1 RefSeq gene 1849140 1849721 . + . ID=gene1678;Name=YPTS_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08415;old_locus_tag=YPTS_1647 NC_010634.1 Protein Homology CDS 1849140 1849721 . + 0 ID=cds1615;Parent=gene1678;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11 NC_010634.1 RefSeq gene 1849908 1851764 . + . ID=gene1679;Name=YPTS_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08420;old_locus_tag=YPTS_1648 NC_010634.1 Protein Homology CDS 1849908 1851764 . + 0 ID=cds1616;Parent=gene1679;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NC_010634.1 RefSeq gene 1851909 1853495 . - . ID=gene1680;Name=YPTS_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08425;old_locus_tag=YPTS_1649 NC_010634.1 Protein Homology CDS 1851909 1853495 . - 0 ID=cds1617;Parent=gene1680;Dbxref=Genbank:WP_011192111.1;Name=WP_011192111.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192111.1;transl_table=11 NC_010634.1 RefSeq gene 1853937 1854716 . + . ID=gene1681;Name=YPTS_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08430;old_locus_tag=YPTS_1650 NC_010634.1 Protein Homology CDS 1853937 1854716 . + 0 ID=cds1618;Parent=gene1681;Dbxref=Genbank:WP_011192112.1;Name=WP_011192112.1;gbkey=CDS;product=iron reductase;protein_id=WP_011192112.1;transl_table=11 NC_010634.1 RefSeq gene 1854867 1856414 . + . ID=gene1682;Name=YPTS_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08435;old_locus_tag=YPTS_1651 NC_010634.1 Protein Homology CDS 1854867 1856414 . + 0 ID=cds1619;Parent=gene1682;Dbxref=Genbank:WP_011192113.1;Name=WP_011192113.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_011192113.1;transl_table=11 NC_010634.1 RefSeq gene 1856449 1857747 . + . ID=gene1683;Name=YPTS_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08440;old_locus_tag=YPTS_1652 NC_010634.1 Protein Homology CDS 1856449 1857747 . + 0 ID=cds1620;Parent=gene1683;Dbxref=Genbank:WP_002211878.1;Name=WP_002211878.1;gbkey=CDS;product=lysine N6-hydroxylase/L-ornithine N5-oxygenase family;protein_id=WP_002211878.1;transl_table=11 NC_010634.1 RefSeq gene 1857747 1858325 . + . ID=gene1684;Name=YPTS_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08445;old_locus_tag=YPTS_1653 NC_010634.1 Protein Homology CDS 1857747 1858325 . + 0 ID=cds1621;Parent=gene1684;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11 NC_010634.1 RefSeq gene 1858322 1860166 . + . ID=gene1685;Name=YPTS_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08450;old_locus_tag=YPTS_1654 NC_010634.1 Protein Homology CDS 1858322 1860166 . + 0 ID=cds1622;Parent=gene1685;Dbxref=Genbank:WP_011192114.1;Name=WP_011192114.1;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=WP_011192114.1;transl_table=11 NC_010634.1 RefSeq gene 1860293 1861111 . - . ID=gene1686;Name=YPTS_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08455;old_locus_tag=YPTS_1655 NC_010634.1 Protein Homology CDS 1860293 1861111 . - 0 ID=cds1623;Parent=gene1686;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11 NC_010634.1 RefSeq gene 1861138 1862178 . - . ID=gene1687;Name=YPTS_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08460;old_locus_tag=YPTS_1656 NC_010634.1 Protein Homology CDS 1861138 1862178 . - 0 ID=cds1624;Parent=gene1687;Dbxref=Genbank:WP_002211880.1;Name=WP_002211880.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211880.1;transl_table=11 NC_010634.1 RefSeq gene 1862165 1863205 . - . ID=gene1688;Name=YPTS_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08465;old_locus_tag=YPTS_1657 NC_010634.1 Protein Homology CDS 1862165 1863205 . - 0 ID=cds1625;Parent=gene1688;Dbxref=Genbank:WP_012413633.1;Name=WP_012413633.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_012413633.1;transl_table=11 NC_010634.1 RefSeq gene 1863202 1864281 . - . ID=gene1689;Name=YPTS_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08470;old_locus_tag=YPTS_1658 NC_010634.1 Protein Homology CDS 1863202 1864281 . - 0 ID=cds1626;Parent=gene1689;Dbxref=Genbank:WP_011192116.1;Name=WP_011192116.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_011192116.1;transl_table=11 NC_010634.1 RefSeq gene 1864371 1866632 . - . ID=gene1690;Name=YPTS_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08475;old_locus_tag=YPTS_1659 NC_010634.1 Protein Homology CDS 1864371 1866632 . - 0 ID=cds1627;Parent=gene1690;Dbxref=Genbank:WP_011192117.1;Name=WP_011192117.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_011192117.1;transl_table=11 NC_010634.1 RefSeq gene 1866862 1868676 . - . ID=gene1691;Name=YPTS_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08480;old_locus_tag=YPTS_1660 NC_010634.1 Protein Homology CDS 1866862 1868676 . - 0 ID=cds1628;Parent=gene1691;Dbxref=Genbank:WP_011192118.1;Name=WP_011192118.1;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=WP_011192118.1;transl_table=11 NC_010634.1 RefSeq gene 1869623 1870513 . + . ID=gene1692;Name=YPTS_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08485;old_locus_tag=YPTS_1661 NC_010634.1 Protein Homology CDS 1869623 1870513 . + 0 ID=cds1629;Parent=gene1692;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11 NC_010634.1 RefSeq gene 1870597 1871490 . + . ID=gene1693;Name=YPTS_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08490;old_locus_tag=YPTS_1662 NC_010634.1 Protein Homology CDS 1870597 1871490 . + 0 ID=cds1630;Parent=gene1693;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11 NC_010634.1 RefSeq gene 1871876 1873285 . + . ID=gene1694;Name=YPTS_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08495;old_locus_tag=YPTS_1663 NC_010634.1 Protein Homology CDS 1871876 1873285 . + 0 ID=cds1631;Parent=gene1694;Dbxref=Genbank:WP_002211888.1;Name=WP_002211888.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11 NC_010634.1 RefSeq gene 1873485 1874099 . - . ID=gene1695;Name=YPTS_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08500;old_locus_tag=YPTS_1664 NC_010634.1 Protein Homology CDS 1873485 1874099 . - 0 ID=cds1632;Parent=gene1695;Dbxref=Genbank:WP_002211889.1;Name=WP_002211889.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisIE;protein_id=WP_002211889.1;transl_table=11 NC_010634.1 RefSeq gene 1874093 1874869 . - . ID=gene1696;Name=YPTS_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08505;old_locus_tag=YPTS_1665 NC_010634.1 Protein Homology CDS 1874093 1874869 . - 0 ID=cds1633;Parent=gene1696;Dbxref=Genbank:WP_011192119.1;Name=WP_011192119.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_011192119.1;transl_table=11 NC_010634.1 RefSeq gene 1874851 1875588 . - . ID=gene1697;Name=YPTS_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08510;old_locus_tag=YPTS_1666 NC_010634.1 Protein Homology CDS 1874851 1875588 . - 0 ID=cds1634;Parent=gene1697;Dbxref=Genbank:WP_002211891.1;Name=WP_002211891.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NC_010634.1 RefSeq gene 1875594 1876184 . - . ID=gene1698;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YPTS_RS08515;old_locus_tag=YPTS_1667 NC_010634.1 Protein Homology CDS 1875594 1876184 . - 0 ID=cds1635;Parent=gene1698;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NC_010634.1 RefSeq gene 1876184 1877251 . - . ID=gene1699;Name=YPTS_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08520;old_locus_tag=YPTS_1668 NC_010634.1 Protein Homology CDS 1876184 1877251 . - 0 ID=cds1636;Parent=gene1699;Dbxref=Genbank:WP_011192120.1;Name=WP_011192120.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisB;protein_id=WP_011192120.1;transl_table=11 NC_010634.1 RefSeq gene 1877248 1878396 . - . ID=gene1700;Name=YPTS_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08525;old_locus_tag=YPTS_1669 NC_010634.1 Protein Homology CDS 1877248 1878396 . - 0 ID=cds1637;Parent=gene1700;Dbxref=Genbank:WP_011192121.1;Name=WP_011192121.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_011192121.1;transl_table=11 NC_010634.1 RefSeq gene 1878399 1879730 . - . ID=gene1701;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YPTS_RS08530;old_locus_tag=YPTS_1670 NC_010634.1 Protein Homology CDS 1878399 1879730 . - 0 ID=cds1638;Parent=gene1701;Dbxref=Genbank:WP_011192122.1;Name=WP_011192122.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_011192122.1;transl_table=11 NC_010634.1 RefSeq gene 1879734 1880633 . - . ID=gene1702;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YPTS_RS08535;old_locus_tag=YPTS_1671 NC_010634.1 Protein Homology CDS 1879734 1880633 . - 0 ID=cds1639;Parent=gene1702;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NC_010634.1 RefSeq gene 1881339 1882166 . + . ID=gene1703;Name=YPTS_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08540;old_locus_tag=YPTS_1672 NC_010634.1 Protein Homology CDS 1881339 1882166 . + 0 ID=cds1640;Parent=gene1703;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11 NC_010634.1 RefSeq gene 1882473 1883129 . - . ID=gene1704;Name=YPTS_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08545;old_locus_tag=YPTS_1673 NC_010634.1 Protein Homology CDS 1882473 1883129 . - 0 ID=cds1641;Parent=gene1704;Dbxref=Genbank:WP_011192123.1;Name=WP_011192123.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192123.1;transl_table=11 NC_010634.1 RefSeq gene 1883546 1884082 . - . ID=gene1705;Name=YPTS_RS21635;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS21635;old_locus_tag=YPTS_1674 NC_010634.1 RefSeq gene 1883546 1883980 . - . ID=gene1706;Name=YPTS_RS08550;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS08550 NC_010634.1 RefSeq repeat_region 1883890 1884060 . + . ID=id124;gbkey=repeat_region NC_010634.1 RefSeq gene 1884238 1885233 . - . ID=gene1707;Name=YPTS_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08560;old_locus_tag=YPTS_1676 NC_010634.1 Protein Homology CDS 1884238 1885233 . - 0 ID=cds1642;Parent=gene1707;Dbxref=Genbank:WP_011192124.1;Name=WP_011192124.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011192124.1;transl_table=11 NC_010634.1 RefSeq gene 1885230 1886786 . - . ID=gene1708;Name=YPTS_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08565;old_locus_tag=YPTS_1677 NC_010634.1 Protein Homology CDS 1885230 1886786 . - 0 ID=cds1643;Parent=gene1708;Dbxref=Genbank:WP_012413635.1;Name=WP_012413635.1;gbkey=CDS;product=ABC transporter;protein_id=WP_012413635.1;transl_table=11 NC_010634.1 RefSeq gene 1887072 1888163 . + . ID=gene1709;Name=YPTS_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08570;old_locus_tag=YPTS_1678 NC_010634.1 Protein Homology CDS 1887072 1888163 . + 0 ID=cds1644;Parent=gene1709;Dbxref=Genbank:WP_002216312.1;Name=WP_002216312.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11 NC_010634.1 RefSeq gene 1888418 1888633 . + . ID=gene1710;Name=YPTS_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08575;old_locus_tag=YPTS_1679 NC_010634.1 Protein Homology CDS 1888418 1888633 . + 0 ID=cds1645;Parent=gene1710;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NC_010634.1 RefSeq gene 1888623 1890014 . + . ID=gene1711;Name=YPTS_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08580;old_locus_tag=YPTS_1680 NC_010634.1 Protein Homology CDS 1888623 1890014 . + 0 ID=cds1646;Parent=gene1711;Dbxref=Genbank:WP_011192126.1;Name=WP_011192126.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_011192126.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1890510 1891261 . + . ID=id125;gbkey=repeat_region NC_010634.1 RefSeq gene 1891296 1892726 . - . ID=gene1712;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YPTS_RS08585;old_locus_tag=YPTS_1681 NC_010634.1 Protein Homology CDS 1891296 1892726 . - 0 ID=cds1647;Parent=gene1712;Dbxref=Genbank:WP_011192127.1;Name=WP_011192127.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_011192127.1;transl_table=11 NC_010634.1 RefSeq gene 1893019 1894128 . + . ID=gene1713;Name=YPTS_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08590;old_locus_tag=YPTS_1682 NC_010634.1 Protein Homology CDS 1893019 1894128 . + 0 ID=cds1648;Parent=gene1713;Dbxref=Genbank:WP_012304241.1;Name=WP_012304241.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_012304241.1;transl_table=11 NC_010634.1 RefSeq gene 1894562 1894879 . + . ID=gene1714;Name=YPTS_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08595;old_locus_tag=YPTS_1683 NC_010634.1 Protein Homology CDS 1894562 1894879 . + 0 ID=cds1649;Parent=gene1714;Dbxref=Genbank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217522.1;transl_table=11 NC_010634.1 RefSeq gene 1895023 1898097 . - . ID=gene1715;Name=YPTS_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08600;old_locus_tag=YPTS_1684 NC_010634.1 Protein Homology CDS 1895023 1898097 . - 0 ID=cds1650;Parent=gene1715;Dbxref=Genbank:WP_032467070.1;Name=WP_032467070.1;gbkey=CDS;product=adhesin;protein_id=WP_032467070.1;transl_table=11 NC_010634.1 RefSeq gene 1899290 1900594 . + . ID=gene1716;Name=YPTS_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08605;old_locus_tag=YPTS_1685 NC_010634.1 Protein Homology CDS 1899290 1900594 . + 0 ID=cds1651;Parent=gene1716;Dbxref=Genbank:WP_002211911.1;Name=WP_002211911.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211911.1;transl_table=11 NC_010634.1 RefSeq gene 1900603 1901025 . - . ID=gene1717;Name=YPTS_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08610;old_locus_tag=YPTS_1686 NC_010634.1 Protein Homology CDS 1900603 1901025 . - 0 ID=cds1652;Parent=gene1717;Dbxref=Genbank:WP_012413636.1;Name=WP_012413636.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_012413636.1;transl_table=11 NC_010634.1 RefSeq gene 1901453 1902193 . + . ID=gene1718;Name=YPTS_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08615;old_locus_tag=YPTS_1688 NC_010634.1 Protein Homology CDS 1901453 1902193 . + 0 ID=cds1653;Parent=gene1718;Dbxref=Genbank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216393.1;transl_table=11 NC_010634.1 RefSeq gene 1902241 1903083 . + . ID=gene1719;Name=YPTS_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08620;old_locus_tag=YPTS_1689 NC_010634.1 Protein Homology CDS 1902241 1903083 . + 0 ID=cds1654;Parent=gene1719;Dbxref=Genbank:WP_011192131.1;Name=WP_011192131.1;gbkey=CDS;product=ureidoglycolate lyase;protein_id=WP_011192131.1;transl_table=11 NC_010634.1 RefSeq gene 1903115 1904392 . + . ID=gene1720;Name=YPTS_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08625;old_locus_tag=YPTS_1690 NC_010634.1 Protein Homology CDS 1903115 1904392 . + 0 ID=cds1655;Parent=gene1720;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NC_010634.1 RefSeq gene 1904670 1905815 . + . ID=gene1721;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YPTS_RS08630;old_locus_tag=YPTS_1692 NC_010634.1 Protein Homology CDS 1904670 1905815 . + 0 ID=cds1656;Parent=gene1721;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11 NC_010634.1 RefSeq gene 1906020 1907387 . - . ID=gene1722;Name=YPTS_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08635;old_locus_tag=YPTS_1693 NC_010634.1 Protein Homology CDS 1906020 1907387 . - 0 ID=cds1657;Parent=gene1722;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NC_010634.1 RefSeq gene 1907714 1909111 . + . ID=gene1723;Name=YPTS_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08640;old_locus_tag=YPTS_1694 NC_010634.1 Protein Homology CDS 1907714 1909111 . + 0 ID=cds1658;Parent=gene1723;Dbxref=Genbank:WP_002354070.1;Name=WP_002354070.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_002354070.1;transl_table=11 NC_010634.1 RefSeq gene 1909139 1910479 . - . ID=gene1724;Name=YPTS_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08645;old_locus_tag=YPTS_1695 NC_010634.1 Protein Homology CDS 1909139 1910479 . - 0 ID=cds1659;Parent=gene1724;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11 NC_010634.1 RefSeq gene 1910515 1911396 . - . ID=gene1725;Name=YPTS_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08650;old_locus_tag=YPTS_1696 NC_010634.1 Protein Homology CDS 1910515 1911396 . - 0 ID=cds1660;Parent=gene1725;Dbxref=Genbank:WP_012105305.1;Name=WP_012105305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105305.1;transl_table=11 NC_010634.1 RefSeq gene 1911973 1912668 . + . ID=gene1726;Name=YPTS_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08655;old_locus_tag=YPTS_1697 NC_010634.1 Protein Homology CDS 1911973 1912668 . + 0 ID=cds1661;Parent=gene1726;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NC_010634.1 RefSeq gene 1912758 1913297 . + . ID=gene1727;Name=YPTS_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08660;old_locus_tag=YPTS_1698 NC_010634.1 Protein Homology CDS 1912758 1913297 . + 0 ID=cds1662;Parent=gene1727;Dbxref=Genbank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211926.1;transl_table=11 NC_010634.1 RefSeq gene 1913639 1913800 . - . ID=gene1728;Name=YPTS_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08665;old_locus_tag=YPTS_1699 NC_010634.1 Protein Homology CDS 1913639 1913800 . - 0 ID=cds1663;Parent=gene1728;Dbxref=Genbank:WP_012413638.1;Name=WP_012413638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413638.1;transl_table=11 NC_010634.1 RefSeq repeat_region 1913924 1915878 . + . ID=id126;gbkey=repeat_region NC_010634.1 RefSeq gene 1914010 1915032 . + . ID=gene1729;Name=YPTS_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08670;old_locus_tag=YPTS_1700 NC_010634.1 Protein Homology CDS 1914010 1915032 . + 0 ID=cds1664;Parent=gene1729;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_010634.1 RefSeq gene 1915032 1915811 . + . ID=gene1730;Name=YPTS_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08675;old_locus_tag=YPTS_1701 NC_010634.1 Protein Homology CDS 1915032 1915811 . + 0 ID=cds1665;Parent=gene1730;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_010634.1 RefSeq gene 1915855 1915968 . - . ID=gene1731;Name=YPTS_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08680;old_locus_tag=YPTS_1702 NC_010634.1 Protein Homology CDS 1915855 1915968 . - 0 ID=cds1666;Parent=gene1731;Dbxref=Genbank:WP_002212894.1;Name=WP_002212894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212894.1;transl_table=11 NC_010634.1 RefSeq gene 1916410 1916991 . - . ID=gene1732;Name=YPTS_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08690;old_locus_tag=YPTS_1704 NC_010634.1 Protein Homology CDS 1916410 1916991 . - 0 ID=cds1667;Parent=gene1732;Dbxref=Genbank:WP_000937857.1;Name=WP_000937857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000937857.1;transl_table=11 NC_010634.1 RefSeq gene 1916976 1917158 . - . ID=gene1733;Name=YPTS_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08695;old_locus_tag=YPTS_1705 NC_010634.1 Protein Homology CDS 1916976 1917158 . - 0 ID=cds1668;Parent=gene1733;Dbxref=Genbank:WP_012413639.1;Name=WP_012413639.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413639.1;transl_table=11 NC_010634.1 RefSeq gene 1917180 1917365 . - . ID=gene1734;Name=YPTS_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08700;old_locus_tag=YPTS_1706 NC_010634.1 Protein Homology CDS 1917180 1917365 . - 0 ID=cds1669;Parent=gene1734;Dbxref=Genbank:WP_000205185.1;Name=WP_000205185.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000205185.1;transl_table=11 NC_010634.1 RefSeq gene 1917505 1917939 . - . ID=gene1735;Name=YPTS_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08705 NC_010634.1 Protein Homology CDS 1917505 1917939 . - 0 ID=cds1670;Parent=gene1735;Dbxref=Genbank:WP_002212886.1;Name=WP_002212886.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212886.1;transl_table=11 NC_010634.1 RefSeq gene 1919304 1921325 . - . ID=gene1736;Name=YPTS_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08710;old_locus_tag=YPTS_1708 NC_010634.1 Protein Homology CDS 1919304 1921325 . - 0 ID=cds1671;Parent=gene1736;Dbxref=Genbank:WP_000784549.1;Name=WP_000784549.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_000784549.1;transl_table=11 NC_010634.1 RefSeq gene 1921456 1923033 . - . ID=gene1737;Name=YPTS_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08715;old_locus_tag=YPTS_1709 NC_010634.1 Protein Homology CDS 1921456 1923033 . - 0 ID=cds1672;Parent=gene1737;Dbxref=Genbank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;product=salicyl-AMP ligase;protein_id=WP_001088826.1;transl_table=11 NC_010634.1 RefSeq gene 1923037 1923840 . - . ID=gene1738;Name=YPTS_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08720;old_locus_tag=YPTS_1710 NC_010634.1 Protein Homology CDS 1923037 1923840 . - 0 ID=cds1673;Parent=gene1738;Dbxref=Genbank:WP_002212799.1;Name=WP_002212799.1;gbkey=CDS;product=thioesterase;protein_id=WP_002212799.1;transl_table=11 NC_010634.1 RefSeq gene 1923837 1924937 . - . ID=gene1739;Name=YPTS_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08725;old_locus_tag=YPTS_1711 NC_010634.1 Protein Homology CDS 1923837 1924937 . - 0 ID=cds1674;Parent=gene1739;Dbxref=Genbank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000982866.1;transl_table=11 NC_010634.1 RefSeq gene 1924934 1934425 . - . ID=gene1740;Name=YPTS_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08730;old_locus_tag=YPTS_1712 NC_010634.1 Protein Homology CDS 1924934 1934425 . - 0 ID=cds1675;Parent=gene1740;Dbxref=Genbank:WP_012413640.1;Name=WP_012413640.1;gbkey=CDS;product=polyketide synthase;protein_id=WP_012413640.1;transl_table=11 NC_010634.1 RefSeq gene 1934513 1940620 . - . ID=gene1741;Name=YPTS_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08735;old_locus_tag=YPTS_1713 NC_010634.1 Protein Homology CDS 1934513 1940620 . - 0 ID=cds1676;Parent=gene1741;Dbxref=Genbank:WP_002212775.1;Name=WP_002212775.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002212775.1;transl_table=11 NC_010634.1 RefSeq gene 1940811 1941770 . - . ID=gene1742;Name=YPTS_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08740;old_locus_tag=YPTS_1714 NC_010634.1 Protein Homology CDS 1940811 1941770 . - 0 ID=cds1677;Parent=gene1742;Dbxref=Genbank:WP_000140406.1;Name=WP_000140406.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_000140406.1;transl_table=11 NC_010634.1 RefSeq gene 1942027 1943739 . + . ID=gene1743;Name=YPTS_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08745;old_locus_tag=YPTS_1715 NC_010634.1 Protein Homology CDS 1942027 1943739 . + 0 ID=cds1678;Parent=gene1743;Dbxref=Genbank:WP_012413641.1;Name=WP_012413641.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_012413641.1;transl_table=11 NC_010634.1 RefSeq gene 1943726 1945528 . + . ID=gene1744;Name=YPTS_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08750;old_locus_tag=YPTS_1716 NC_010634.1 Protein Homology CDS 1943726 1945528 . + 0 ID=cds1679;Parent=gene1744;Dbxref=Genbank:WP_002212761.1;Name=WP_002212761.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212761.1;transl_table=11 NC_010634.1 RefSeq gene 1945521 1946801 . + . ID=gene1745;Name=YPTS_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08755;old_locus_tag=YPTS_1717 NC_010634.1 Protein Homology CDS 1945521 1946801 . + 0 ID=cds1680;Parent=gene1745;Dbxref=Genbank:WP_012413642.1;Name=WP_012413642.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012413642.1;transl_table=11 NC_010634.1 RefSeq gene 1946829 1948133 . + . ID=gene1746;Name=YPTS_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08760;old_locus_tag=YPTS_1718 NC_010634.1 Protein Homology CDS 1946829 1948133 . + 0 ID=cds1681;Parent=gene1746;Dbxref=Genbank:WP_000703040.1;Name=WP_000703040.1;Note=catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin;gbkey=CDS;product=salicylate synthase;protein_id=WP_000703040.1;transl_table=11 NC_010634.1 RefSeq gene 1948327 1949584 . - . ID=gene1747;Name=YPTS_RS08765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS08765;pseudo=true NC_010634.1 Protein Homology CDS 1948327 1949584 . - 0 ID=cds1682;Parent=gene1747;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 1949745 1949851 . + . ID=id127;gbkey=repeat_region NC_010634.1 RefSeq gene 1949746 1949821 . - . ID=gene1748;Name=YPTS_RS08770;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS08770;old_locus_tag=YPTS_R0072 NC_010634.1 tRNAscan-SE tRNA 1949746 1949821 . - . ID=rna58;Parent=gene1748;anticodon=(pos:complement(1949786..1949788));gbkey=tRNA;product=tRNA-Asn NC_010634.1 tRNAscan-SE exon 1949746 1949821 . - . ID=id128;Parent=rna58;anticodon=(pos:complement(1949786..1949788));gbkey=tRNA;product=tRNA-Asn NC_010634.1 RefSeq gene 1950267 1950896 . - . ID=gene1749;Name=YPTS_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08775;old_locus_tag=YPTS_1721 NC_010634.1 Protein Homology CDS 1950267 1950896 . - 0 ID=cds1683;Parent=gene1749;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11 NC_010634.1 RefSeq gene 1951154 1952446 . - . ID=gene1750;Name=YPTS_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08780;old_locus_tag=YPTS_1722 NC_010634.1 Protein Homology CDS 1951154 1952446 . - 0 ID=cds1684;Parent=gene1750;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11 NC_010634.1 RefSeq gene 1952466 1952972 . - . ID=gene1751;Name=YPTS_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08785;old_locus_tag=YPTS_1723 NC_010634.1 Protein Homology CDS 1952466 1952972 . - 0 ID=cds1685;Parent=gene1751;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11 NC_010634.1 RefSeq gene 1953096 1954088 . - . ID=gene1752;Name=YPTS_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08790;old_locus_tag=YPTS_1724 NC_010634.1 Protein Homology CDS 1953096 1954088 . - 0 ID=cds1686;Parent=gene1752;Dbxref=Genbank:WP_011192138.1;Name=WP_011192138.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_011192138.1;transl_table=11 NC_010634.1 RefSeq gene 1954611 1955351 . + . ID=gene1753;Name=YPTS_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08795;old_locus_tag=YPTS_1725 NC_010634.1 Protein Homology CDS 1954611 1955351 . + 0 ID=cds1687;Parent=gene1753;Dbxref=Genbank:WP_011192139.1;Name=WP_011192139.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_011192139.1;transl_table=11 NC_010634.1 RefSeq gene 1955597 1955760 . - . ID=gene1754;Name=YPTS_RS08800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS08800;old_locus_tag=YPTS_1726;pseudo=true NC_010634.1 Protein Homology CDS 1955597 1955760 . - 0 ID=cds1688;Parent=gene1754;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 1955777 1957903 . - . ID=gene1755;Name=YPTS_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08805;old_locus_tag=YPTS_1727 NC_010634.1 Protein Homology CDS 1955777 1957903 . - 0 ID=cds1689;Parent=gene1755;Dbxref=Genbank:WP_011192140.1;Name=WP_011192140.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_011192140.1;transl_table=11 NC_010634.1 RefSeq gene 1957981 1959288 . - . ID=gene1756;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=YPTS_RS08810;old_locus_tag=YPTS_1728 NC_010634.1 Protein Homology CDS 1957981 1959288 . - 0 ID=cds1690;Parent=gene1756;Dbxref=Genbank:WP_002230721.1;Name=WP_002230721.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_002230721.1;transl_table=11 NC_010634.1 RefSeq gene 1959643 1960659 . + . ID=gene1757;Name=YPTS_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08815;old_locus_tag=YPTS_1729 NC_010634.1 Protein Homology CDS 1959643 1960659 . + 0 ID=cds1691;Parent=gene1757;Dbxref=Genbank:WP_002230719.1;Name=WP_002230719.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230719.1;transl_table=11 NC_010634.1 RefSeq gene 1960812 1960887 . - . ID=gene1758;Name=YPTS_RS08820;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS08820;old_locus_tag=YPTS_R0071 NC_010634.1 tRNAscan-SE tRNA 1960812 1960887 . - . ID=rna59;Parent=gene1758;anticodon=(pos:complement(1960852..1960854));gbkey=tRNA;product=tRNA-Asn NC_010634.1 tRNAscan-SE exon 1960812 1960887 . - . ID=id129;Parent=rna59;anticodon=(pos:complement(1960852..1960854));gbkey=tRNA;product=tRNA-Asn NC_010634.1 RefSeq gene 1961065 1961877 . - . ID=gene1759;Name=YPTS_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08825;old_locus_tag=YPTS_1730 NC_010634.1 Protein Homology CDS 1961065 1961877 . - 0 ID=cds1692;Parent=gene1759;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11 NC_010634.1 RefSeq gene 1961893 1962081 . + . ID=gene1760;Name=YPTS_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08830 NC_010634.1 Protein Homology CDS 1961893 1962081 . + 0 ID=cds1693;Parent=gene1760;Dbxref=Genbank:WP_002216490.1;Name=WP_002216490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216490.1;transl_table=11 NC_010634.1 RefSeq gene 1962267 1962551 . - . ID=gene1761;Name=YPTS_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08835;old_locus_tag=YPTS_1731 NC_010634.1 Protein Homology CDS 1962267 1962551 . - 0 ID=cds1694;Parent=gene1761;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11 NC_010634.1 RefSeq gene 1962788 1963639 . - . ID=gene1762;Name=YPTS_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08840;old_locus_tag=YPTS_1732 NC_010634.1 Protein Homology CDS 1962788 1963639 . - 0 ID=cds1695;Parent=gene1762;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11 NC_010634.1 RefSeq gene 1963742 1965460 . - . ID=gene1763;Name=YPTS_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08845;old_locus_tag=YPTS_1733 NC_010634.1 Protein Homology CDS 1963742 1965460 . - 0 ID=cds1696;Parent=gene1763;Dbxref=Genbank:WP_002211045.1;Name=WP_002211045.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11 NC_010634.1 RefSeq gene 1966116 1966280 . + . ID=gene1764;Name=YPTS_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08850;old_locus_tag=YPTS_1735 NC_010634.1 Protein Homology CDS 1966116 1966280 . + 0 ID=cds1697;Parent=gene1764;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11 NC_010634.1 RefSeq gene 1966362 1966748 . - . ID=gene1765;Name=YPTS_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08855;old_locus_tag=YPTS_1736 NC_010634.1 Protein Homology CDS 1966362 1966748 . - 0 ID=cds1698;Parent=gene1765;Dbxref=Genbank:WP_002224436.1;Name=WP_002224436.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002224436.1;transl_table=11 NC_010634.1 RefSeq gene 1966979 1967092 . + . ID=gene1766;Name=YPTS_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08860;old_locus_tag=YPTS_1737 NC_010634.1 Protein Homology CDS 1966979 1967092 . + 0 ID=cds1699;Parent=gene1766;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11 NC_010634.1 RefSeq gene 1967303 1967542 . + . ID=gene1767;Name=YPTS_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08865;old_locus_tag=YPTS_1738 NC_010634.1 Protein Homology CDS 1967303 1967542 . + 0 ID=cds1700;Parent=gene1767;Dbxref=Genbank:WP_011192141.1;Name=WP_011192141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192141.1;transl_table=11 NC_010634.1 RefSeq gene 1967633 1967866 . - . ID=gene1768;Name=YPTS_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08870;old_locus_tag=YPTS_1739 NC_010634.1 Protein Homology CDS 1967633 1967866 . - 0 ID=cds1701;Parent=gene1768;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11 NC_010634.1 RefSeq gene 1968449 1968733 . + . ID=gene1769;Name=YPTS_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08875;old_locus_tag=YPTS_1740 NC_010634.1 Protein Homology CDS 1968449 1968733 . + 0 ID=cds1702;Parent=gene1769;Dbxref=Genbank:WP_011192142.1;Name=WP_011192142.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192142.1;transl_table=11 NC_010634.1 RefSeq gene 1968996 1969295 . + . ID=gene1770;Name=YPTS_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08880;old_locus_tag=YPTS_1741 NC_010634.1 Protein Homology CDS 1968996 1969295 . + 0 ID=cds1703;Parent=gene1770;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11 NC_010634.1 RefSeq gene 1969404 1969649 . + . ID=gene1771;Name=YPTS_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08885;old_locus_tag=YPTS_1742 NC_010634.1 Protein Homology CDS 1969404 1969649 . + 0 ID=cds1704;Parent=gene1771;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11 NC_010634.1 RefSeq gene 1969886 1971259 . + . ID=gene1772;Name=YPTS_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08890;old_locus_tag=YPTS_1743 NC_010634.1 Protein Homology CDS 1969886 1971259 . + 0 ID=cds1705;Parent=gene1772;Dbxref=Genbank:WP_002211055.1;Name=WP_002211055.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002211055.1;transl_table=11 NC_010634.1 RefSeq gene 1971555 1972163 . - . ID=gene1773;Name=YPTS_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08895;old_locus_tag=YPTS_1744 NC_010634.1 Protein Homology CDS 1971555 1972163 . - 0 ID=cds1706;Parent=gene1773;Dbxref=Genbank:WP_011192143.1;Name=WP_011192143.1;gbkey=CDS;product=lipid A palmitoyltransferase PagP;protein_id=WP_011192143.1;transl_table=11 NC_010634.1 RefSeq gene 1972178 1972399 . + . ID=gene1774;Name=YPTS_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08900 NC_010634.1 Protein Homology CDS 1972178 1972399 . + 0 ID=cds1707;Parent=gene1774;Dbxref=Genbank:WP_002430102.1;Name=WP_002430102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430102.1;transl_table=11 NC_010634.1 cmsearch region 1973148 1973576 . + . ID=id130;Note=cspA;gbkey=misc_feature NC_010634.1 RefSeq gene 1973165 1973281 . + . ID=gene1775;Name=YPTS_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08905;old_locus_tag=YPTS_1746 NC_010634.1 Protein Homology CDS 1973165 1973281 . + 0 ID=cds1708;Parent=gene1775;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11 NC_010634.1 RefSeq gene 1973324 1973533 . + . ID=gene1776;Name=YPTS_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08910;old_locus_tag=YPTS_1747 NC_010634.1 Protein Homology CDS 1973324 1973533 . + 0 ID=cds1709;Parent=gene1776;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11 NC_010634.1 RefSeq gene 1973624 1974379 . - . ID=gene1777;Name=YPTS_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08915;old_locus_tag=YPTS_1748 NC_010634.1 Protein Homology CDS 1973624 1974379 . - 0 ID=cds1710;Parent=gene1777;Dbxref=Genbank:WP_012413644.1;Name=WP_012413644.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_012413644.1;transl_table=11 NC_010634.1 RefSeq gene 1974780 1975619 . + . ID=gene1778;Name=YPTS_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08920;old_locus_tag=YPTS_1749 NC_010634.1 Protein Homology CDS 1974780 1975619 . + 0 ID=cds1711;Parent=gene1778;Dbxref=Genbank:WP_011192144.1;Name=WP_011192144.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_011192144.1;transl_table=11 NC_010634.1 RefSeq gene 1975841 1976119 . - . ID=gene1779;Name=YPTS_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08925;old_locus_tag=YPTS_1750 NC_010634.1 Protein Homology CDS 1975841 1976119 . - 0 ID=cds1712;Parent=gene1779;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NC_010634.1 RefSeq gene 1976341 1978422 . - . ID=gene1780;Name=YPTS_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08930;old_locus_tag=YPTS_1751 NC_010634.1 Protein Homology CDS 1976341 1978422 . - 0 ID=cds1713;Parent=gene1780;Dbxref=Genbank:WP_012413645.1;Name=WP_012413645.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_012413645.1;transl_table=11 NC_010634.1 RefSeq gene 1978844 1981072 . + . ID=gene1781;Name=YPTS_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08935;old_locus_tag=YPTS_1752 NC_010634.1 Protein Homology CDS 1978844 1981072 . + 0 ID=cds1714;Parent=gene1781;Dbxref=Genbank:WP_032467069.1;Name=WP_032467069.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_032467069.1;transl_table=11 NC_010634.1 RefSeq gene 1981249 1981818 . - . ID=gene1782;Name=YPTS_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08940;old_locus_tag=YPTS_1753 NC_010634.1 Protein Homology CDS 1981249 1981818 . - 0 ID=cds1715;Parent=gene1782;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11 NC_010634.1 RefSeq gene 1982247 1982708 . - . ID=gene1783;Name=YPTS_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08945;old_locus_tag=YPTS_1754 NC_010634.1 Protein Homology CDS 1982247 1982708 . - 0 ID=cds1716;Parent=gene1783;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11 NC_010634.1 RefSeq gene 1982908 1983786 . - . ID=gene1784;Name=YPTS_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08950;old_locus_tag=YPTS_1755 NC_010634.1 Protein Homology CDS 1982908 1983786 . - 0 ID=cds1717;Parent=gene1784;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NC_010634.1 RefSeq gene 1983802 1984599 . - . ID=gene1785;Name=YPTS_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08955;old_locus_tag=YPTS_1756 NC_010634.1 Protein Homology CDS 1983802 1984599 . - 0 ID=cds1718;Parent=gene1785;Dbxref=Genbank:WP_002211068.1;Name=WP_002211068.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NC_010634.1 RefSeq gene 1984691 1985665 . - . ID=gene1786;Name=YPTS_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08960;old_locus_tag=YPTS_1757 NC_010634.1 Protein Homology CDS 1984691 1985665 . - 0 ID=cds1719;Parent=gene1786;Dbxref=Genbank:WP_002211069.1;Name=WP_002211069.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NC_010634.1 RefSeq gene 1986376 1987920 . + . ID=gene1787;Name=YPTS_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08965;old_locus_tag=YPTS_1759 NC_010634.1 Protein Homology CDS 1986376 1987920 . + 0 ID=cds1720;Parent=gene1787;Dbxref=Genbank:WP_002231099.1;Name=WP_002231099.1;gbkey=CDS;product=membrane protein;protein_id=WP_002231099.1;transl_table=11 NC_010634.1 RefSeq gene 1988022 1988489 . - . ID=gene1788;Name=YPTS_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08970;old_locus_tag=YPTS_1760 NC_010634.1 Protein Homology CDS 1988022 1988489 . - 0 ID=cds1721;Parent=gene1788;Dbxref=Genbank:WP_002211070.1;Name=WP_002211070.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_002211070.1;transl_table=11 NC_010634.1 RefSeq gene 1988877 1989509 . + . ID=gene1789;Name=YPTS_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08975;old_locus_tag=YPTS_1761 NC_010634.1 Protein Homology CDS 1988877 1989509 . + 0 ID=cds1722;Parent=gene1789;Dbxref=Genbank:WP_011192147.1;Name=WP_011192147.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_011192147.1;transl_table=11 NC_010634.1 RefSeq gene 1989506 1990270 . + . ID=gene1790;Name=YPTS_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08980;old_locus_tag=YPTS_1762 NC_010634.1 Protein Homology CDS 1989506 1990270 . + 0 ID=cds1723;Parent=gene1790;Dbxref=Genbank:WP_011192148.1;Name=WP_011192148.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_011192148.1;transl_table=11 NC_010634.1 RefSeq gene 1990267 1991733 . + . ID=gene1791;Name=YPTS_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08985;old_locus_tag=YPTS_1763 NC_010634.1 Protein Homology CDS 1990267 1991733 . + 0 ID=cds1724;Parent=gene1791;Dbxref=Genbank:WP_011192149.1;Name=WP_011192149.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_011192149.1;transl_table=11 NC_010634.1 RefSeq gene 1991852 1992709 . + . ID=gene1792;Name=YPTS_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08990;old_locus_tag=YPTS_1764 NC_010634.1 Protein Homology CDS 1991852 1992709 . + 0 ID=cds1725;Parent=gene1792;Dbxref=Genbank:WP_002211072.1;Name=WP_002211072.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11 NC_010634.1 RefSeq gene 1992734 1993132 . + . ID=gene1793;Name=YPTS_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS08995;old_locus_tag=YPTS_1765 NC_010634.1 Protein Homology CDS 1992734 1993132 . + 0 ID=cds1726;Parent=gene1793;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11 NC_010634.1 RefSeq gene 1993126 1993929 . + . ID=gene1794;Name=YPTS_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09000;old_locus_tag=YPTS_1766 NC_010634.1 Protein Homology CDS 1993126 1993929 . + 0 ID=cds1727;Parent=gene1794;Dbxref=Genbank:WP_011192151.1;Name=WP_011192151.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_011192151.1;transl_table=11 NC_010634.1 RefSeq gene 1993940 1994746 . + . ID=gene1795;Name=YPTS_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09005;old_locus_tag=YPTS_1767 NC_010634.1 Protein Homology CDS 1993940 1994746 . + 0 ID=cds1728;Parent=gene1795;Dbxref=Genbank:WP_002231102.1;Name=WP_002231102.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002231102.1;transl_table=11 NC_010634.1 RefSeq gene 1994772 1996139 . + . ID=gene1796;Name=YPTS_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09010;old_locus_tag=YPTS_1768 NC_010634.1 Protein Homology CDS 1994772 1996139 . + 0 ID=cds1729;Parent=gene1796;Dbxref=Genbank:WP_002211076.1;Name=WP_002211076.1;gbkey=CDS;product=4-hydroxyphenylacetate permease;protein_id=WP_002211076.1;transl_table=11 NC_010634.1 RefSeq gene 1996207 1997769 . + . ID=gene1797;Name=YPTS_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09015;old_locus_tag=YPTS_1769 NC_010634.1 Protein Homology CDS 1996207 1997769 . + 0 ID=cds1730;Parent=gene1797;Dbxref=Genbank:WP_002211077.1;Name=WP_002211077.1;gbkey=CDS;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211077.1;transl_table=11 NC_010634.1 RefSeq gene 1997790 1998287 . + . ID=gene1798;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YPTS_RS09020;old_locus_tag=YPTS_1770 NC_010634.1 Protein Homology CDS 1997790 1998287 . + 0 ID=cds1731;Parent=gene1798;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11 NC_010634.1 RefSeq gene 1998567 1999931 . - . ID=gene1799;Name=YPTS_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09025;old_locus_tag=YPTS_1771 NC_010634.1 Protein Homology CDS 1998567 1999931 . - 0 ID=cds1732;Parent=gene1799;Dbxref=Genbank:WP_011192152.1;Name=WP_011192152.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_011192152.1;transl_table=11 NC_010634.1 RefSeq gene 2000639 2001238 . - . ID=gene1800;Name=YPTS_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09030;old_locus_tag=YPTS_1772 NC_010634.1 Protein Homology CDS 2000639 2001238 . - 0 ID=cds1733;Parent=gene1800;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11 NC_010634.1 RefSeq gene 2001235 2002611 . - . ID=gene1801;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YPTS_RS09035;old_locus_tag=YPTS_1773 NC_010634.1 Protein Homology CDS 2001235 2002611 . - 0 ID=cds1734;Parent=gene1801;Dbxref=Genbank:WP_012413648.1;Name=WP_012413648.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase component I;protein_id=WP_012413648.1;transl_table=11 NC_010634.1 RefSeq gene 2002776 2003033 . + . ID=gene1802;Name=YPTS_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09040;old_locus_tag=YPTS_1774 NC_010634.1 Protein Homology CDS 2002776 2003033 . + 0 ID=cds1735;Parent=gene1802;Dbxref=Genbank:WP_011192154.1;Name=WP_011192154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192154.1;transl_table=11 NC_010634.1 RefSeq gene 2003159 2004340 . - . ID=gene1803;Name=YPTS_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09045;old_locus_tag=YPTS_1775 NC_010634.1 Protein Homology CDS 2003159 2004340 . - 0 ID=cds1736;Parent=gene1803;Dbxref=Genbank:WP_011192155.1;Name=WP_011192155.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_011192155.1;transl_table=11 NC_010634.1 RefSeq gene 2004653 2006035 . + . ID=gene1804;Name=YPTS_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09050;old_locus_tag=YPTS_1776 NC_010634.1 Protein Homology CDS 2004653 2006035 . + 0 ID=cds1737;Parent=gene1804;Dbxref=Genbank:WP_011192156.1;Name=WP_011192156.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_011192156.1;transl_table=11 NC_010634.1 RefSeq gene 2006129 2006449 . + . ID=gene1805;Name=YPTS_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09055;old_locus_tag=YPTS_1777 NC_010634.1 Protein Homology CDS 2006129 2006449 . + 0 ID=cds1738;Parent=gene1805;Dbxref=Genbank:WP_002211085.1;Name=WP_002211085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211085.1;transl_table=11 NC_010634.1 RefSeq gene 2006489 2006797 . + . ID=gene1806;Name=YPTS_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09060;old_locus_tag=YPTS_1778 NC_010634.1 Protein Homology CDS 2006489 2006797 . + 0 ID=cds1739;Parent=gene1806;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11 NC_010634.1 RefSeq gene 2006889 2007314 . + . ID=gene1807;Name=YPTS_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09065;old_locus_tag=YPTS_1779 NC_010634.1 Protein Homology CDS 2006889 2007314 . + 0 ID=cds1740;Parent=gene1807;Dbxref=Genbank:WP_012304226.1;Name=WP_012304226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304226.1;transl_table=11 NC_010634.1 RefSeq gene 2007624 2009675 . + . ID=gene1808;Name=YPTS_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09070;old_locus_tag=YPTS_1780 NC_010634.1 Protein Homology CDS 2007624 2009675 . + 0 ID=cds1741;Parent=gene1808;Dbxref=Genbank:WP_012413649.1;Name=WP_012413649.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=protease;protein_id=WP_012413649.1;transl_table=11 NC_010634.1 RefSeq gene 2010397 2011347 . + . ID=gene1809;Name=YPTS_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09075;old_locus_tag=YPTS_1782 NC_010634.1 Protein Homology CDS 2010397 2011347 . + 0 ID=cds1742;Parent=gene1809;Dbxref=Genbank:WP_011192157.1;Name=WP_011192157.1;gbkey=CDS;product=proline iminopeptidase;protein_id=WP_011192157.1;transl_table=11 NC_010634.1 RefSeq gene 2011407 2011637 . - . ID=gene1810;Name=YPTS_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09080;old_locus_tag=YPTS_1783 NC_010634.1 Protein Homology CDS 2011407 2011637 . - 0 ID=cds1743;Parent=gene1810;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NC_010634.1 RefSeq gene 2012038 2012547 . + . ID=gene1811;Name=YPTS_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09085;old_locus_tag=YPTS_1784 NC_010634.1 Protein Homology CDS 2012038 2012547 . + 0 ID=cds1744;Parent=gene1811;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11 NC_010634.1 RefSeq gene 2012926 2013312 . + . ID=gene1812;Name=YPTS_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09090;old_locus_tag=YPTS_1785 NC_010634.1 Protein Homology CDS 2012926 2013312 . + 0 ID=cds1745;Parent=gene1812;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11 NC_010634.1 RefSeq gene 2013315 2014199 . + . ID=gene1813;Name=YPTS_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09095;old_locus_tag=YPTS_1786 NC_010634.1 Protein Homology CDS 2013315 2014199 . + 0 ID=cds1746;Parent=gene1813;Dbxref=Genbank:WP_012304224.1;Name=WP_012304224.1;gbkey=CDS;product=copper resistance protein CopD;protein_id=WP_012304224.1;transl_table=11 NC_010634.1 RefSeq gene 2014296 2014637 . + . ID=gene1814;Name=YPTS_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09100;old_locus_tag=YPTS_1787 NC_010634.1 Protein Homology CDS 2014296 2014637 . + 0 ID=cds1747;Parent=gene1814;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11 NC_010634.1 RefSeq gene 2014917 2015147 . + . ID=gene1815;Name=YPTS_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09105 NC_010634.1 Protein Homology CDS 2014917 2015147 . + 0 ID=cds1748;Parent=gene1815;Dbxref=Genbank:WP_002218131.1;Name=WP_002218131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218131.1;transl_table=11 NC_010634.1 RefSeq gene 2015160 2015486 . - . ID=gene1816;Name=YPTS_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09110;old_locus_tag=YPTS_1788 NC_010634.1 Protein Homology CDS 2015160 2015486 . - 0 ID=cds1749;Parent=gene1816;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2015620 2016938 . + . ID=id131;gbkey=repeat_region NC_010634.1 RefSeq gene 2015693 2016901 . + . ID=gene1817;Name=YPTS_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09115;old_locus_tag=YPTS_1789 NC_010634.1 Protein Homology CDS 2015693 2016901 . + 0 ID=cds1750;Parent=gene1817;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_010634.1 RefSeq gene 2016845 2017261 . - . ID=gene1818;Name=YPTS_RS09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS09120;old_locus_tag=YPTS_1790;pseudo=true NC_010634.1 Protein Homology CDS 2016845 2017261 . - 0 ID=cds1751;Parent=gene1818;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2016923..2016925)%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 2017678 2018652 . - . ID=gene1819;Name=YPTS_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09125;old_locus_tag=YPTS_1791 NC_010634.1 Protein Homology CDS 2017678 2018652 . - 0 ID=cds1752;Parent=gene1819;Dbxref=Genbank:WP_012413651.1;Name=WP_012413651.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413651.1;transl_table=11 NC_010634.1 RefSeq gene 2019776 2020936 . + . ID=gene1820;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YPTS_RS09130;old_locus_tag=YPTS_1792 NC_010634.1 Protein Homology CDS 2019776 2020936 . + 0 ID=cds1753;Parent=gene1820;Dbxref=Genbank:WP_002211099.1;Name=WP_002211099.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11 NC_010634.1 RefSeq gene 2020936 2023014 . + . ID=gene1821;Name=YPTS_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09135;old_locus_tag=YPTS_1793 NC_010634.1 Protein Homology CDS 2020936 2023014 . + 0 ID=cds1754;Parent=gene1821;Dbxref=Genbank:WP_012413652.1;Name=WP_012413652.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_012413652.1;transl_table=11 NC_010634.1 RefSeq gene 2023014 2023436 . + . ID=gene1822;Name=YPTS_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09140;old_locus_tag=YPTS_1794 NC_010634.1 Protein Homology CDS 2023014 2023436 . + 0 ID=cds1755;Parent=gene1822;Dbxref=Genbank:WP_011192161.1;Name=WP_011192161.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_011192161.1;transl_table=11 NC_010634.1 RefSeq gene 2024178 2024969 . + . ID=gene1823;Name=YPTS_RS09145;end_range=2024969,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS09145;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 2024178 2024969 . + 0 ID=cds1756;Parent=gene1823;end_range=2024969,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 2024913 2027003 . + . ID=gene1824;Name=YPTS_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09150 NC_010634.1 Protein Homology CDS 2024913 2027003 . + 0 ID=cds1757;Parent=gene1824;Dbxref=Genbank:WP_042592924.1;Name=WP_042592924.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592924.1;transl_table=11 NC_010634.1 RefSeq gene 2027183 2027623 . - . ID=gene1825;Name=YPTS_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09155;old_locus_tag=YPTS_1796 NC_010634.1 Protein Homology CDS 2027183 2027623 . - 0 ID=cds1758;Parent=gene1825;Dbxref=Genbank:WP_002211107.1;Name=WP_002211107.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagellar synthesis protein FlgN;protein_id=WP_002211107.1;transl_table=11 NC_010634.1 RefSeq gene 2027642 2027944 . - . ID=gene1826;Name=YPTS_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09160;old_locus_tag=YPTS_1797 NC_010634.1 Protein Homology CDS 2027642 2027944 . - 0 ID=cds1759;Parent=gene1826;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11 NC_010634.1 RefSeq gene 2028095 2028808 . - . ID=gene1827;Name=YPTS_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09165;old_locus_tag=YPTS_1798 NC_010634.1 Protein Homology CDS 2028095 2028808 . - 0 ID=cds1760;Parent=gene1827;Dbxref=Genbank:WP_032466651.1;Name=WP_032466651.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_032466651.1;transl_table=11 NC_010634.1 RefSeq gene 2029047 2029460 . + . ID=gene1828;Name=YPTS_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09170;old_locus_tag=YPTS_1799 NC_010634.1 Protein Homology CDS 2029047 2029460 . + 0 ID=cds1761;Parent=gene1828;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11 NC_010634.1 RefSeq gene 2029466 2029870 . + . ID=gene1829;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPTS_RS09175;old_locus_tag=YPTS_1800 NC_010634.1 Protein Homology CDS 2029466 2029870 . + 0 ID=cds1762;Parent=gene1829;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NC_010634.1 RefSeq gene 2029885 2030571 . + . ID=gene1830;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPTS_RS09180;old_locus_tag=YPTS_1801 NC_010634.1 Protein Homology CDS 2029885 2030571 . + 0 ID=cds1763;Parent=gene1830;Dbxref=Genbank:WP_011192164.1;Name=WP_011192164.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_011192164.1;transl_table=11 NC_010634.1 RefSeq gene 2030773 2032059 . + . ID=gene1831;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPTS_RS09185;old_locus_tag=YPTS_1802 NC_010634.1 Protein Homology CDS 2030773 2032059 . + 0 ID=cds1764;Parent=gene1831;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NC_010634.1 RefSeq gene 2032081 2032836 . + . ID=gene1832;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=YPTS_RS09190;old_locus_tag=YPTS_1803 NC_010634.1 Protein Homology CDS 2032081 2032836 . + 0 ID=cds1765;Parent=gene1832;Dbxref=Genbank:WP_012413655.1;Name=WP_012413655.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_012413655.1;transl_table=11 NC_010634.1 RefSeq gene 2032862 2033644 . + . ID=gene1833;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPTS_RS09195;old_locus_tag=YPTS_1804 NC_010634.1 Protein Homology CDS 2032862 2033644 . + 0 ID=cds1766;Parent=gene1833;Dbxref=Genbank:WP_012413656.1;Name=WP_012413656.1;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_012413656.1;transl_table=11 NC_010634.1 RefSeq gene 2033746 2034477 . + . ID=gene1834;Name=YPTS_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09200;old_locus_tag=YPTS_1805 NC_010634.1 Protein Homology CDS 2033746 2034477 . + 0 ID=cds1767;Parent=gene1834;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11 NC_010634.1 RefSeq gene 2034492 2035601 . + . ID=gene1835;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=YPTS_RS09205;old_locus_tag=YPTS_1806 NC_010634.1 Protein Homology CDS 2034492 2035601 . + 0 ID=cds1768;Parent=gene1835;Dbxref=Genbank:WP_002211117.1;Name=WP_002211117.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=WP_002211117.1;transl_table=11 NC_010634.1 RefSeq gene 2035601 2036545 . + . ID=gene1836;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPTS_RS09210;old_locus_tag=YPTS_1807 NC_010634.1 Protein Homology CDS 2035601 2036545 . + 0 ID=cds1769;Parent=gene1836;Dbxref=Genbank:WP_012413657.1;Name=WP_012413657.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_012413657.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2036551 2037391 . + . ID=id132;gbkey=repeat_region NC_010634.1 RefSeq gene 2037559 2039223 . + . ID=gene1837;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPTS_RS09215;old_locus_tag=YPTS_1808 NC_010634.1 Protein Homology CDS 2037559 2039223 . + 0 ID=cds1770;Parent=gene1837;Dbxref=Genbank:WP_002211119.1;Name=WP_002211119.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211119.1;transl_table=11 NC_010634.1 RefSeq gene 2039362 2040342 . + . ID=gene1838;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPTS_RS09220;old_locus_tag=YPTS_1809 NC_010634.1 Protein Homology CDS 2039362 2040342 . + 0 ID=cds1771;Parent=gene1838;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NC_010634.1 RefSeq gene 2040371 2041372 . - . ID=gene1839;Name=YPTS_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09225;old_locus_tag=YPTS_1810 NC_010634.1 Protein Homology CDS 2040371 2041372 . - 0 ID=cds1772;Parent=gene1839;Dbxref=Genbank:WP_012413658.1;Name=WP_012413658.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_012413658.1;transl_table=11 NC_010634.1 RefSeq gene 2041590 2043656 . + . ID=gene1840;Name=YPTS_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09230;old_locus_tag=YPTS_1811 NC_010634.1 Protein Homology CDS 2041590 2043656 . + 0 ID=cds1773;Parent=gene1840;Dbxref=Genbank:WP_012413659.1;Name=WP_012413659.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_012413659.1;transl_table=11 NC_010634.1 RefSeq gene 2043786 2044844 . + . ID=gene1841;Name=YPTS_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09235;old_locus_tag=YPTS_1813 NC_010634.1 Protein Homology CDS 2043786 2044844 . + 0 ID=cds1774;Parent=gene1841;Dbxref=Genbank:WP_012413660.1;Name=WP_012413660.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012413660.1;transl_table=11 NC_010634.1 RefSeq gene 2044887 2045882 . + . ID=gene1842;Name=YPTS_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09240;old_locus_tag=YPTS_1814 NC_010634.1 Protein Homology CDS 2044887 2045882 . + 0 ID=cds1775;Parent=gene1842;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11 NC_010634.1 RefSeq gene 2045948 2047525 . + . ID=gene1843;Name=YPTS_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09245;old_locus_tag=YPTS_1815 NC_010634.1 Protein Homology CDS 2045948 2047525 . + 0 ID=cds1776;Parent=gene1843;Dbxref=Genbank:WP_012413661.1;Name=WP_012413661.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012413661.1;transl_table=11 NC_010634.1 RefSeq gene 2047528 2048550 . + . ID=gene1844;Name=YPTS_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09250;old_locus_tag=YPTS_1816 NC_010634.1 Protein Homology CDS 2047528 2048550 . + 0 ID=cds1777;Parent=gene1844;Dbxref=Genbank:WP_011192171.1;Name=WP_011192171.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011192171.1;transl_table=11 NC_010634.1 RefSeq gene 2048599 2049558 . + . ID=gene1845;Name=YPTS_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09255;old_locus_tag=YPTS_1817 NC_010634.1 Protein Homology CDS 2048599 2049558 . + 0 ID=cds1778;Parent=gene1845;Dbxref=Genbank:WP_011192172.1;Name=WP_011192172.1;gbkey=CDS;product=sugar kinase;protein_id=WP_011192172.1;transl_table=11 NC_010634.1 RefSeq gene 2049624 2050223 . - . ID=gene1846;Name=YPTS_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09260;old_locus_tag=YPTS_1818 NC_010634.1 Protein Homology CDS 2049624 2050223 . - 0 ID=cds1779;Parent=gene1846;Dbxref=Genbank:WP_011192173.1;Name=WP_011192173.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192173.1;transl_table=11 NC_010634.1 RefSeq gene 2050696 2051478 . - . ID=gene1847;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YPTS_RS09265;old_locus_tag=YPTS_1820 NC_010634.1 Protein Homology CDS 2050696 2051478 . - 0 ID=cds1780;Parent=gene1847;Dbxref=Genbank:WP_011192174.1;Name=WP_011192174.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_011192174.1;transl_table=11 NC_010634.1 RefSeq gene 2051481 2051750 . - . ID=gene1848;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YPTS_RS09270;old_locus_tag=YPTS_1821 NC_010634.1 Protein Homology CDS 2051481 2051750 . - 0 ID=cds1781;Parent=gene1848;Dbxref=Genbank:WP_002211131.1;Name=WP_002211131.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NC_010634.1 RefSeq gene 2051856 2052596 . - . ID=gene1849;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPTS_RS09275;old_locus_tag=YPTS_1822 NC_010634.1 Protein Homology CDS 2051856 2052596 . - 0 ID=cds1782;Parent=gene1849;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11 NC_010634.1 RefSeq gene 2052677 2053228 . - . ID=gene1850;Name=YPTS_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09280;old_locus_tag=YPTS_1823 NC_010634.1 Protein Homology CDS 2052677 2053228 . - 0 ID=cds1783;Parent=gene1850;Dbxref=Genbank:WP_012413662.1;Name=WP_012413662.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_012413662.1;transl_table=11 NC_010634.1 RefSeq gene 2053228 2053644 . - . ID=gene1851;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPTS_RS09285;old_locus_tag=YPTS_1824 NC_010634.1 Protein Homology CDS 2053228 2053644 . - 0 ID=cds1784;Parent=gene1851;Dbxref=Genbank:WP_011192176.1;Name=WP_011192176.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_011192176.1;transl_table=11 NC_010634.1 RefSeq gene 2053641 2054642 . - . ID=gene1852;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YPTS_RS09290;old_locus_tag=YPTS_1825 NC_010634.1 Protein Homology CDS 2053641 2054642 . - 0 ID=cds1785;Parent=gene1852;Dbxref=Genbank:WP_002211135.1;Name=WP_002211135.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11 NC_010634.1 RefSeq gene 2054648 2055118 . - . ID=gene1853;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YPTS_RS09295;old_locus_tag=YPTS_1826 NC_010634.1 Protein Homology CDS 2054648 2055118 . - 0 ID=cds1786;Parent=gene1853;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11 NC_010634.1 RefSeq gene 2055366 2056718 . - . ID=gene1854;Name=YPTS_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09300;old_locus_tag=YPTS_1827 NC_010634.1 Protein Homology CDS 2055366 2056718 . - 0 ID=cds1787;Parent=gene1854;Dbxref=Genbank:WP_012413663.1;Name=WP_012413663.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_012413663.1;transl_table=11 NC_010634.1 RefSeq gene 2056715 2057161 . - . ID=gene1855;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPTS_RS09305;old_locus_tag=YPTS_1828 NC_010634.1 Protein Homology CDS 2056715 2057161 . - 0 ID=cds1788;Parent=gene1855;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11 NC_010634.1 RefSeq gene 2057237 2058655 . - . ID=gene1856;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPTS_RS09310;old_locus_tag=YPTS_1829 NC_010634.1 Protein Homology CDS 2057237 2058655 . - 0 ID=cds1789;Parent=gene1856;Dbxref=Genbank:WP_012413664.1;Name=WP_012413664.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_012413664.1;transl_table=11 NC_010634.1 RefSeq gene 2058655 2059371 . - . ID=gene1857;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPTS_RS09315;old_locus_tag=YPTS_1830 NC_010634.1 Protein Homology CDS 2058655 2059371 . - 0 ID=cds1790;Parent=gene1857;Dbxref=Genbank:WP_002211141.1;Name=WP_002211141.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_002211141.1;transl_table=11 NC_010634.1 RefSeq gene 2059364 2060356 . - . ID=gene1858;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPTS_RS09320;old_locus_tag=YPTS_1831 NC_010634.1 Protein Homology CDS 2059364 2060356 . - 0 ID=cds1791;Parent=gene1858;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NC_010634.1 RefSeq gene 2060353 2062065 . - . ID=gene1859;Name=YPTS_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09325;old_locus_tag=YPTS_1832 NC_010634.1 Protein Homology CDS 2060353 2062065 . - 0 ID=cds1792;Parent=gene1859;Dbxref=Genbank:WP_012413665.1;Name=WP_012413665.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_012413665.1;transl_table=11 NC_010634.1 RefSeq gene 2062418 2062729 . + . ID=gene1860;Name=YPTS_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09330;old_locus_tag=YPTS_1833 NC_010634.1 Protein Homology CDS 2062418 2062729 . + 0 ID=cds1793;Parent=gene1860;Dbxref=Genbank:WP_011192182.1;Name=WP_011192182.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_011192182.1;transl_table=11 NC_010634.1 RefSeq gene 2062879 2063046 . + . ID=gene1861;Name=YPTS_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09335 NC_010634.1 Protein Homology CDS 2062879 2063046 . + 0 ID=cds1794;Parent=gene1861;Dbxref=Genbank:WP_002215990.1;Name=WP_002215990.1;gbkey=CDS;product=tail protein;protein_id=WP_002215990.1;transl_table=11 NC_010634.1 RefSeq gene 2063197 2063376 . + . ID=gene1862;Name=YPTS_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09340;old_locus_tag=YPTS_1834 NC_010634.1 Protein Homology CDS 2063197 2063376 . + 0 ID=cds1795;Parent=gene1862;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NC_010634.1 RefSeq gene 2063387 2063862 . + . ID=gene1863;Name=YPTS_RS09345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS09345;pseudo=true NC_010634.1 Protein Homology CDS 2063387 2063862 . + 0 ID=cds1796;Parent=gene1863;exception=annotated by transcript or proteomic data;gbkey=CDS;product=death-on-curing protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 2064048 2064659 . - . ID=gene1864;Name=YPTS_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09350;old_locus_tag=YPTS_1836 NC_010634.1 Protein Homology CDS 2064048 2064659 . - 0 ID=cds1797;Parent=gene1864;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11 NC_010634.1 RefSeq gene 2064820 2067774 . - . ID=gene1865;Name=YPTS_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09355;old_locus_tag=YPTS_1837 NC_010634.1 Protein Homology CDS 2064820 2067774 . - 0 ID=cds1798;Parent=gene1865;Dbxref=Genbank:WP_011192184.1;Name=WP_011192184.1;gbkey=CDS;product=metal-dependent phosphohydrolase;protein_id=WP_011192184.1;transl_table=11 NC_010634.1 RefSeq gene 2068128 2069003 . - . ID=gene1866;Name=YPTS_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09360;old_locus_tag=YPTS_1838 NC_010634.1 Protein Homology CDS 2068128 2069003 . - 0 ID=cds1799;Parent=gene1866;Dbxref=Genbank:WP_002211147.1;Name=WP_002211147.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NC_010634.1 RefSeq gene 2069010 2069249 . - . ID=gene1867;Name=YPTS_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09365 NC_010634.1 Protein Homology CDS 2069010 2069249 . - 0 ID=cds1800;Parent=gene1867;Dbxref=Genbank:WP_002215994.1;Name=WP_002215994.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215994.1;transl_table=11 NC_010634.1 RefSeq gene 2069304 2069666 . - . ID=gene1868;Name=YPTS_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09370;old_locus_tag=YPTS_1839 NC_010634.1 Protein Homology CDS 2069304 2069666 . - 0 ID=cds1801;Parent=gene1868;Dbxref=Genbank:WP_011192185.1;Name=WP_011192185.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_011192185.1;transl_table=11 NC_010634.1 RefSeq gene 2069677 2070075 . - . ID=gene1869;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPTS_RS09375;old_locus_tag=YPTS_1840 NC_010634.1 Protein Homology CDS 2069677 2070075 . - 0 ID=cds1802;Parent=gene1869;Dbxref=Genbank:WP_011192186.1;Name=WP_011192186.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_011192186.1;transl_table=11 NC_010634.1 RefSeq gene 2070086 2071486 . - . ID=gene1870;Name=YPTS_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09380;old_locus_tag=YPTS_1841 NC_010634.1 Protein Homology CDS 2070086 2071486 . - 0 ID=cds1803;Parent=gene1870;Dbxref=Genbank:WP_011192187.1;Name=WP_011192187.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_011192187.1;transl_table=11 NC_010634.1 RefSeq gene 2071783 2072892 . + . ID=gene1871;Name=YPTS_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09385;old_locus_tag=YPTS_1842 NC_010634.1 Protein Homology CDS 2071783 2072892 . + 0 ID=cds1804;Parent=gene1871;Dbxref=Genbank:WP_002211152.1;Name=WP_002211152.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002211152.1;transl_table=11 NC_010634.1 RefSeq gene 2073239 2073961 . + . ID=gene1872;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=YPTS_RS09390;old_locus_tag=YPTS_1843 NC_010634.1 Protein Homology CDS 2073239 2073961 . + 0 ID=cds1805;Parent=gene1872;Dbxref=Genbank:WP_011192188.1;Name=WP_011192188.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_011192188.1;transl_table=11 NC_010634.1 RefSeq gene 2074196 2074705 . + . ID=gene1873;Name=YPTS_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09395;old_locus_tag=YPTS_1845 NC_010634.1 Protein Homology CDS 2074196 2074705 . + 0 ID=cds1806;Parent=gene1873;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11 NC_010634.1 RefSeq gene 2074994 2075986 . + . ID=gene1874;Name=YPTS_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09400;old_locus_tag=YPTS_1846 NC_010634.1 Protein Homology CDS 2074994 2075986 . + 0 ID=cds1807;Parent=gene1874;Dbxref=Genbank:WP_011192189.1;Name=WP_011192189.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_011192189.1;transl_table=11 NC_010634.1 RefSeq gene 2076110 2076910 . + . ID=gene1875;Name=YPTS_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09405;old_locus_tag=YPTS_1847 NC_010634.1 Protein Homology CDS 2076110 2076910 . + 0 ID=cds1808;Parent=gene1875;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11 NC_010634.1 RefSeq gene 2076910 2077572 . + . ID=gene1876;Name=YPTS_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09410;old_locus_tag=YPTS_1848 NC_010634.1 Protein Homology CDS 2076910 2077572 . + 0 ID=cds1809;Parent=gene1876;Dbxref=Genbank:WP_011192190.1;Name=WP_011192190.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_011192190.1;transl_table=11 NC_010634.1 RefSeq gene 2077575 2078336 . + . ID=gene1877;Name=YPTS_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09415;old_locus_tag=YPTS_1849 NC_010634.1 Protein Homology CDS 2077575 2078336 . + 0 ID=cds1810;Parent=gene1877;Dbxref=Genbank:WP_002211159.1;Name=WP_002211159.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211159.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2078324 2078492 . + . ID=id133;gbkey=repeat_region NC_010634.1 RefSeq gene 2078628 2078999 . - . ID=gene1878;Name=YPTS_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09420;old_locus_tag=YPTS_1851 NC_010634.1 Protein Homology CDS 2078628 2078999 . - 0 ID=cds1811;Parent=gene1878;Dbxref=Genbank:WP_002223875.1;Name=WP_002223875.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002223875.1;transl_table=11 NC_010634.1 RefSeq gene 2078999 2079292 . - . ID=gene1879;Name=YPTS_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09425;old_locus_tag=YPTS_1852 NC_010634.1 Protein Homology CDS 2078999 2079292 . - 0 ID=cds1812;Parent=gene1879;Dbxref=Genbank:WP_012413668.1;Name=WP_012413668.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413668.1;transl_table=11 NC_010634.1 RefSeq gene 2079830 2083801 . - . ID=gene1880;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YPTS_RS09430;old_locus_tag=YPTS_1854 NC_010634.1 Protein Homology CDS 2079830 2083801 . - 0 ID=cds1813;Parent=gene1880;Dbxref=Genbank:WP_002224448.1;Name=WP_002224448.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=WP_002224448.1;transl_table=11 NC_010634.1 RefSeq gene 2084146 2084343 . + . ID=gene1881;Name=YPTS_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09435;old_locus_tag=YPTS_1855 NC_010634.1 Protein Homology CDS 2084146 2084343 . + 0 ID=cds1814;Parent=gene1881;Dbxref=Genbank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211163.1;transl_table=11 NC_010634.1 RefSeq gene 2084373 2085857 . + . ID=gene1882;Name=YPTS_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09440;old_locus_tag=YPTS_1856 NC_010634.1 Protein Homology CDS 2084373 2085857 . + 0 ID=cds1815;Parent=gene1882;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11 NC_010634.1 RefSeq gene 2086211 2087038 . + . ID=gene1883;Name=YPTS_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09445;old_locus_tag=YPTS_1857 NC_010634.1 Protein Homology CDS 2086211 2087038 . + 0 ID=cds1816;Parent=gene1883;Dbxref=Genbank:WP_002403646.1;Name=WP_002403646.1;gbkey=CDS;product=iron permease;protein_id=WP_002403646.1;transl_table=11 NC_010634.1 RefSeq gene 2087068 2088198 . + . ID=gene1884;Name=YPTS_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09450;old_locus_tag=YPTS_1858 NC_010634.1 Protein Homology CDS 2087068 2088198 . + 0 ID=cds1817;Parent=gene1884;Dbxref=Genbank:WP_012413669.1;Name=WP_012413669.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_012413669.1;transl_table=11 NC_010634.1 RefSeq gene 2088209 2089513 . + . ID=gene1885;Name=YPTS_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09455;old_locus_tag=YPTS_1859 NC_010634.1 Protein Homology CDS 2088209 2089513 . + 0 ID=cds1818;Parent=gene1885;Dbxref=Genbank:WP_011192194.1;Name=WP_011192194.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_011192194.1;transl_table=11 NC_010634.1 RefSeq gene 2089599 2090198 . - . ID=gene1886;Name=YPTS_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09460;old_locus_tag=YPTS_1860 NC_010634.1 Protein Homology CDS 2089599 2090198 . - 0 ID=cds1819;Parent=gene1886;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11 NC_010634.1 RefSeq gene 2090592 2091770 . + . ID=gene1887;Name=YPTS_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09465;old_locus_tag=YPTS_1861 NC_010634.1 Protein Homology CDS 2090592 2091770 . + 0 ID=cds1820;Parent=gene1887;Dbxref=Genbank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11 NC_010634.1 RefSeq gene 2091896 2093320 . - . ID=gene1888;Name=YPTS_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09470;old_locus_tag=YPTS_1862 NC_010634.1 Protein Homology CDS 2091896 2093320 . - 0 ID=cds1821;Parent=gene1888;Dbxref=Genbank:WP_011192195.1;Name=WP_011192195.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_011192195.1;transl_table=11 NC_010634.1 RefSeq gene 2093673 2093748 . + . ID=gene1889;Name=YPTS_RS09475;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS09475;old_locus_tag=YPTS_R0037 NC_010634.1 tRNAscan-SE tRNA 2093673 2093748 . + . ID=rna60;Parent=gene1889;anticodon=(pos:2093706..2093708);gbkey=tRNA;product=tRNA-Lys NC_010634.1 tRNAscan-SE exon 2093673 2093748 . + . ID=id134;Parent=rna60;anticodon=(pos:2093706..2093708);gbkey=tRNA;product=tRNA-Lys NC_010634.1 RefSeq gene 2094435 2094986 . + . ID=gene1890;Name=YPTS_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09480;old_locus_tag=YPTS_1863 NC_010634.1 Protein Homology CDS 2094435 2094986 . + 0 ID=cds1822;Parent=gene1890;Dbxref=Genbank:WP_011192196.1;Name=WP_011192196.1;gbkey=CDS;product=attachment protein;protein_id=WP_011192196.1;transl_table=11 NC_010634.1 RefSeq gene 2095326 2095580 . + . ID=gene1891;Name=YPTS_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09485;old_locus_tag=YPTS_1864 NC_010634.1 Protein Homology CDS 2095326 2095580 . + 0 ID=cds1823;Parent=gene1891;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11 NC_010634.1 RefSeq gene 2095608 2095949 . - . ID=gene1892;Name=YPTS_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09490;old_locus_tag=YPTS_1865 NC_010634.1 Protein Homology CDS 2095608 2095949 . - 0 ID=cds1824;Parent=gene1892;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11 NC_010634.1 RefSeq gene 2096077 2096301 . - . ID=gene1893;Name=YPTS_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09495;old_locus_tag=YPTS_1866 NC_010634.1 Protein Homology CDS 2096077 2096301 . - 0 ID=cds1825;Parent=gene1893;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11 NC_010634.1 RefSeq gene 2096964 2097620 . + . ID=gene1894;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=YPTS_RS09500;old_locus_tag=YPTS_1867 NC_010634.1 Protein Homology CDS 2096964 2097620 . + 0 ID=cds1826;Parent=gene1894;Dbxref=Genbank:WP_002211176.1;Name=WP_002211176.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_002211176.1;transl_table=11 NC_010634.1 RefSeq gene 2097613 2099445 . + . ID=gene1895;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YPTS_RS09505;old_locus_tag=YPTS_1868 NC_010634.1 Protein Homology CDS 2097613 2099445 . + 0 ID=cds1827;Parent=gene1895;Dbxref=Genbank:WP_024063361.1;Name=WP_024063361.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_024063361.1;transl_table=11 NC_010634.1 RefSeq gene 2099504 2100052 . + . ID=gene1896;Name=YPTS_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09510;old_locus_tag=YPTS_1869 NC_010634.1 Protein Homology CDS 2099504 2100052 . + 0 ID=cds1828;Parent=gene1896;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NC_010634.1 RefSeq gene 2100197 2100272 . + . ID=gene1897;Name=YPTS_RS09515;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS09515;old_locus_tag=YPTS_R0038 NC_010634.1 tRNAscan-SE tRNA 2100197 2100272 . + . ID=rna61;Parent=gene1897;anticodon=(pos:2100230..2100232);gbkey=tRNA;product=tRNA-Gly NC_010634.1 tRNAscan-SE exon 2100197 2100272 . + . ID=id135;Parent=rna61;anticodon=(pos:2100230..2100232);gbkey=tRNA;product=tRNA-Gly NC_010634.1 RefSeq gene 2100325 2100398 . + . ID=gene1898;Name=YPTS_RS09520;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS09520;old_locus_tag=YPTS_R0039 NC_010634.1 tRNAscan-SE tRNA 2100325 2100398 . + . ID=rna62;Parent=gene1898;anticodon=(pos:2100357..2100359);gbkey=tRNA;product=tRNA-Cys NC_010634.1 tRNAscan-SE exon 2100325 2100398 . + . ID=id136;Parent=rna62;anticodon=(pos:2100357..2100359);gbkey=tRNA;product=tRNA-Cys NC_010634.1 RefSeq gene 2100409 2100494 . + . ID=gene1899;Name=YPTS_RS09525;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS09525;old_locus_tag=YPTS_R0040 NC_010634.1 tRNAscan-SE tRNA 2100409 2100494 . + . ID=rna63;Parent=gene1899;anticodon=(pos:2100443..2100445);gbkey=tRNA;product=tRNA-Leu NC_010634.1 tRNAscan-SE exon 2100409 2100494 . + . ID=id137;Parent=rna63;anticodon=(pos:2100443..2100445);gbkey=tRNA;product=tRNA-Leu NC_010634.1 RefSeq repeat_region 2100441 2100563 . + . ID=id138;gbkey=repeat_region NC_010634.1 RefSeq gene 2100717 2100932 . - . ID=gene1900;Name=YPTS_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09530;old_locus_tag=YPTS_1870 NC_010634.1 Protein Homology CDS 2100717 2100932 . - 0 ID=cds1829;Parent=gene1900;Dbxref=Genbank:WP_012105206.1;Name=WP_012105206.1;gbkey=CDS;product=phage transcriptional activator%2C Ogr/Delta;protein_id=WP_012105206.1;transl_table=11 NC_010634.1 RefSeq gene 2101007 2102101 . - . ID=gene1901;Name=YPTS_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09535;old_locus_tag=YPTS_1871 NC_010634.1 Protein Homology CDS 2101007 2102101 . - 0 ID=cds1830;Parent=gene1901;Dbxref=Genbank:WP_011192293.1;Name=WP_011192293.1;gbkey=CDS;product=late control protein D;protein_id=WP_011192293.1;transl_table=11 NC_010634.1 RefSeq gene 2102098 2102562 . - . ID=gene1902;Name=YPTS_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09540;old_locus_tag=YPTS_1872 NC_010634.1 Protein Homology CDS 2102098 2102562 . - 0 ID=cds1831;Parent=gene1902;Dbxref=Genbank:WP_012413670.1;Name=WP_012413670.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_012413670.1;transl_table=11 NC_010634.1 RefSeq gene 2102574 2105489 . - . ID=gene1903;Name=YPTS_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09545;old_locus_tag=YPTS_1873 NC_010634.1 Protein Homology CDS 2102574 2105489 . - 0 ID=cds1832;Parent=gene1903;Dbxref=Genbank:WP_012413671.1;Name=WP_012413671.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_012413671.1;transl_table=11 NC_010634.1 RefSeq gene 2105616 2105870 . - . ID=gene1904;Name=YPTS_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09550;old_locus_tag=YPTS_1874 NC_010634.1 Protein Homology CDS 2105616 2105870 . - 0 ID=cds1833;Parent=gene1904;Dbxref=Genbank:WP_042593125.1;Name=WP_042593125.1;gbkey=CDS;product=phage tail protein;protein_id=WP_042593125.1;transl_table=11 NC_010634.1 RefSeq gene 2106017 2106532 . - . ID=gene1905;Name=YPTS_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09555;old_locus_tag=YPTS_1875 NC_010634.1 Protein Homology CDS 2106017 2106532 . - 0 ID=cds1834;Parent=gene1905;Dbxref=Genbank:WP_011192298.1;Name=WP_011192298.1;gbkey=CDS;product=major tail tube protein;protein_id=WP_011192298.1;transl_table=11 NC_010634.1 RefSeq gene 2106544 2107719 . - . ID=gene1906;Name=YPTS_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09560;old_locus_tag=YPTS_1876 NC_010634.1 Protein Homology CDS 2106544 2107719 . - 0 ID=cds1835;Parent=gene1906;Dbxref=Genbank:WP_011192299.1;Name=WP_011192299.1;gbkey=CDS;product=tail sheath protein;protein_id=WP_011192299.1;transl_table=11 NC_010634.1 RefSeq gene 2107853 2108332 . - . ID=gene1907;Name=YPTS_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09565;old_locus_tag=YPTS_1877 NC_010634.1 Protein Homology CDS 2107853 2108332 . - 0 ID=cds1836;Parent=gene1907;Dbxref=Genbank:WP_011192300.1;Name=WP_011192300.1;gbkey=CDS;product=phage tail protein;protein_id=WP_011192300.1;transl_table=11 NC_010634.1 RefSeq gene 2108344 2109783 . - . ID=gene1908;Name=YPTS_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09570;old_locus_tag=YPTS_1878 NC_010634.1 Protein Homology CDS 2108344 2109783 . - 0 ID=cds1837;Parent=gene1908;Dbxref=Genbank:WP_012413672.1;Name=WP_012413672.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413672.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2108439 2108702 . + . ID=id139;gbkey=repeat_region NC_010634.1 RefSeq gene 2109780 2110388 . - . ID=gene1909;Name=YPTS_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09575;old_locus_tag=YPTS_1879 NC_010634.1 Protein Homology CDS 2109780 2110388 . - 0 ID=cds1838;Parent=gene1909;Dbxref=Genbank:WP_011192302.1;Name=WP_011192302.1;gbkey=CDS;product=tail protein;protein_id=WP_011192302.1;transl_table=11 NC_010634.1 RefSeq gene 2110381 2111289 . - . ID=gene1910;Name=YPTS_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09580;old_locus_tag=YPTS_1880 NC_010634.1 Protein Homology CDS 2110381 2111289 . - 0 ID=cds1839;Parent=gene1910;Dbxref=Genbank:WP_011192303.1;Name=WP_011192303.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_011192303.1;transl_table=11 NC_010634.1 RefSeq gene 2111292 2111645 . - . ID=gene1911;Name=YPTS_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09585;old_locus_tag=YPTS_1881 NC_010634.1 Protein Homology CDS 2111292 2111645 . - 0 ID=cds1840;Parent=gene1911;Dbxref=Genbank:WP_011192304.1;Name=WP_011192304.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_011192304.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2111403 2111635 . + . ID=id140;gbkey=repeat_region NC_010634.1 RefSeq gene 2111642 2112277 . - . ID=gene1912;Name=YPTS_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09590;old_locus_tag=YPTS_1882 NC_010634.1 Protein Homology CDS 2111642 2112277 . - 0 ID=cds1841;Parent=gene1912;Dbxref=Genbank:WP_011192305.1;Name=WP_011192305.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_011192305.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2112063 2112342 . + . ID=id141;gbkey=repeat_region NC_010634.1 RefSeq gene 2112506 2112985 . + . ID=gene1913;Name=YPTS_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09595;old_locus_tag=YPTS_1883 NC_010634.1 Protein Homology CDS 2112506 2112985 . + 0 ID=cds1842;Parent=gene1913;Dbxref=Genbank:WP_012413673.1;Name=WP_012413673.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413673.1;transl_table=11 NC_010634.1 RefSeq gene 2112996 2113661 . + . ID=gene1914;Name=YPTS_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09600;old_locus_tag=YPTS_1884 NC_010634.1 Protein Homology CDS 2112996 2113661 . + 0 ID=cds1843;Parent=gene1914;Dbxref=Genbank:WP_012413674.1;Name=WP_012413674.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413674.1;transl_table=11 NC_010634.1 RefSeq gene 2113636 2113851 . + . ID=gene1915;Name=YPTS_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09605;old_locus_tag=YPTS_1885 NC_010634.1 GeneMarkS+ CDS 2113636 2113851 . + 0 ID=cds1844;Parent=gene1915;Dbxref=Genbank:WP_012413675.1;Name=WP_012413675.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413675.1;transl_table=11 NC_010634.1 RefSeq gene 2113855 2114301 . - . ID=gene1916;Name=YPTS_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09610;old_locus_tag=YPTS_1886 NC_010634.1 Protein Homology CDS 2113855 2114301 . - 0 ID=cds1845;Parent=gene1916;Dbxref=Genbank:WP_012413676.1;Name=WP_012413676.1;gbkey=CDS;product=virion morphogenesis protein;protein_id=WP_012413676.1;transl_table=11 NC_010634.1 RefSeq gene 2114298 2114765 . - . ID=gene1917;Name=YPTS_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09615;old_locus_tag=YPTS_1887 NC_010634.1 Protein Homology CDS 2114298 2114765 . - 0 ID=cds1846;Parent=gene1917;Dbxref=Genbank:WP_011192308.1;Name=WP_011192308.1;gbkey=CDS;product=tail protein;protein_id=WP_011192308.1;transl_table=11 NC_010634.1 RefSeq gene 2114864 2115286 . - . ID=gene1918;Name=YPTS_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09620;old_locus_tag=YPTS_1888 NC_010634.1 Protein Homology CDS 2114864 2115286 . - 0 ID=cds1847;Parent=gene1918;Dbxref=Genbank:WP_012304190.1;Name=WP_012304190.1;gbkey=CDS;product=lysozyme;protein_id=WP_012304190.1;transl_table=11 NC_010634.1 RefSeq gene 2115291 2115686 . - . ID=gene1919;Name=YPTS_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09625;old_locus_tag=YPTS_1889 NC_010634.1 Protein Homology CDS 2115291 2115686 . - 0 ID=cds1848;Parent=gene1919;Dbxref=Genbank:WP_012304189.1;Name=WP_012304189.1;gbkey=CDS;product=peptidase M15;protein_id=WP_012304189.1;transl_table=11 NC_010634.1 RefSeq gene 2115673 2115852 . - . ID=gene1920;Name=YPTS_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09630 NC_010634.1 Protein Homology CDS 2115673 2115852 . - 0 ID=cds1849;Parent=gene1920;Dbxref=Genbank:WP_032466665.1;Name=WP_032466665.1;gbkey=CDS;product=holin;protein_id=WP_032466665.1;transl_table=11 NC_010634.1 RefSeq gene 2116089 2116292 . - . ID=gene1921;Name=YPTS_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09640;old_locus_tag=YPTS_1891 NC_010634.1 Protein Homology CDS 2116089 2116292 . - 0 ID=cds1850;Parent=gene1921;Dbxref=Genbank:WP_011192312.1;Name=WP_011192312.1;gbkey=CDS;product=tail protein X;protein_id=WP_011192312.1;transl_table=11 NC_010634.1 RefSeq gene 2116292 2116783 . - . ID=gene1922;Name=YPTS_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09645;old_locus_tag=YPTS_1892 NC_010634.1 Protein Homology CDS 2116292 2116783 . - 0 ID=cds1851;Parent=gene1922;Dbxref=Genbank:WP_012413677.1;Name=WP_012413677.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413677.1;transl_table=11 NC_010634.1 RefSeq gene 2117018 2117671 . - . ID=gene1923;Name=YPTS_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09650;old_locus_tag=YPTS_1893 NC_010634.1 Protein Homology CDS 2117018 2117671 . - 0 ID=cds1852;Parent=gene1923;Dbxref=Genbank:WP_012413678.1;Name=WP_012413678.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413678.1;transl_table=11 NC_010634.1 RefSeq gene 2117678 2118733 . - . ID=gene1924;Name=YPTS_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09655;old_locus_tag=YPTS_1894 NC_010634.1 Protein Homology CDS 2117678 2118733 . - 0 ID=cds1853;Parent=gene1924;Dbxref=Genbank:WP_012413679.1;Name=WP_012413679.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_012413679.1;transl_table=11 NC_010634.1 RefSeq gene 2118770 2119585 . - . ID=gene1925;Name=YPTS_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09660;old_locus_tag=YPTS_1895 NC_010634.1 Protein Homology CDS 2118770 2119585 . - 0 ID=cds1854;Parent=gene1925;Dbxref=Genbank:WP_012413680.1;Name=WP_012413680.1;gbkey=CDS;product=phage capsid scaffolding protein;protein_id=WP_012413680.1;transl_table=11 NC_010634.1 RefSeq gene 2119756 2121519 . + . ID=gene1926;Name=YPTS_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09665;old_locus_tag=YPTS_1896 NC_010634.1 Protein Homology CDS 2119756 2121519 . + 0 ID=cds1855;Parent=gene1926;Dbxref=Genbank:WP_012413681.1;Name=WP_012413681.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_012413681.1;transl_table=11 NC_010634.1 RefSeq gene 2121519 2122556 . + . ID=gene1927;Name=YPTS_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09670;old_locus_tag=YPTS_1897 NC_010634.1 Protein Homology CDS 2121519 2122556 . + 0 ID=cds1856;Parent=gene1927;Dbxref=Genbank:WP_012413682.1;Name=WP_012413682.1;gbkey=CDS;product=phage portal protein;protein_id=WP_012413682.1;transl_table=11 NC_010634.1 RefSeq gene 2122664 2122942 . + . ID=gene1928;Name=YPTS_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09675;old_locus_tag=YPTS_1898 NC_010634.1 GeneMarkS+ CDS 2122664 2122942 . + 0 ID=cds1857;Parent=gene1928;Dbxref=Genbank:WP_012413683.1;Name=WP_012413683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413683.1;transl_table=11 NC_010634.1 RefSeq gene 2123030 2123224 . - . ID=gene1929;Name=YPTS_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09680;old_locus_tag=YPTS_1899 NC_010634.1 GeneMarkS+ CDS 2123030 2123224 . - 0 ID=cds1858;Parent=gene1929;Dbxref=Genbank:WP_012413684.1;Name=WP_012413684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413684.1;transl_table=11 NC_010634.1 RefSeq gene 2123311 2123526 . + . ID=gene1930;Name=YPTS_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09685 NC_010634.1 GeneMarkS+ CDS 2123311 2123526 . + 0 ID=cds1859;Parent=gene1930;Dbxref=Genbank:WP_041175565.1;Name=WP_041175565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175565.1;transl_table=11 NC_010634.1 RefSeq gene 2123633 2123977 . - . ID=gene1931;Name=YPTS_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09690;old_locus_tag=YPTS_1900 NC_010634.1 Protein Homology CDS 2123633 2123977 . - 0 ID=cds1860;Parent=gene1931;Dbxref=Genbank:WP_012413685.1;Name=WP_012413685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413685.1;transl_table=11 NC_010634.1 RefSeq gene 2123974 2124204 . - . ID=gene1932;Name=YPTS_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09695;old_locus_tag=YPTS_1901 NC_010634.1 Protein Homology CDS 2123974 2124204 . - 0 ID=cds1861;Parent=gene1932;Dbxref=Genbank:WP_012413686.1;Name=WP_012413686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413686.1;transl_table=11 NC_010634.1 RefSeq gene 2124185 2126740 . - . ID=gene1933;Name=YPTS_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09700;old_locus_tag=YPTS_1902 NC_010634.1 Protein Homology CDS 2124185 2126740 . - 0 ID=cds1862;Parent=gene1933;Dbxref=Genbank:WP_012413687.1;Name=WP_012413687.1;gbkey=CDS;product=replication protein;protein_id=WP_012413687.1;transl_table=11 NC_010634.1 RefSeq gene 2126737 2127600 . - . ID=gene1934;Name=YPTS_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09705;old_locus_tag=YPTS_1903 NC_010634.1 Protein Homology CDS 2126737 2127600 . - 0 ID=cds1863;Parent=gene1934;Dbxref=Genbank:WP_012413688.1;Name=WP_012413688.1;gbkey=CDS;product=methyltransferase;protein_id=WP_012413688.1;transl_table=11 NC_010634.1 RefSeq gene 2127597 2128415 . - . ID=gene1935;Name=YPTS_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09710;old_locus_tag=YPTS_1904 NC_010634.1 Protein Homology CDS 2127597 2128415 . - 0 ID=cds1864;Parent=gene1935;Dbxref=Genbank:WP_012413689.1;Name=WP_012413689.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_012413689.1;transl_table=11 NC_010634.1 RefSeq gene 2128412 2128996 . - . ID=gene1936;Name=YPTS_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09715;old_locus_tag=YPTS_1905 NC_010634.1 Protein Homology CDS 2128412 2128996 . - 0 ID=cds1865;Parent=gene1936;Dbxref=Genbank:WP_042592925.1;Name=WP_042592925.1;gbkey=CDS;product=3'-5' exonuclease;protein_id=WP_042592925.1;transl_table=11 NC_010634.1 RefSeq gene 2129122 2129883 . - . ID=gene1937;Name=YPTS_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09720;old_locus_tag=YPTS_1906 NC_010634.1 Protein Homology CDS 2129122 2129883 . - 0 ID=cds1866;Parent=gene1937;Dbxref=Genbank:WP_012304178.1;Name=WP_012304178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304178.1;transl_table=11 NC_010634.1 RefSeq gene 2129966 2130271 . - . ID=gene1938;Name=YPTS_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09725;old_locus_tag=YPTS_1907 NC_010634.1 Protein Homology CDS 2129966 2130271 . - 0 ID=cds1867;Parent=gene1938;Dbxref=Genbank:WP_012304177.1;Name=WP_012304177.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304177.1;transl_table=11 NC_010634.1 RefSeq gene 2130302 2130562 . - . ID=gene1939;Name=YPTS_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09730;old_locus_tag=YPTS_1908 NC_010634.1 Protein Homology CDS 2130302 2130562 . - 0 ID=cds1868;Parent=gene1939;Dbxref=Genbank:WP_012304176.1;Name=WP_012304176.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304176.1;transl_table=11 NC_010634.1 RefSeq gene 2130704 2131018 . - . ID=gene1940;Name=YPTS_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09735;old_locus_tag=YPTS_1910 NC_010634.1 Protein Homology CDS 2130704 2131018 . - 0 ID=cds1869;Parent=gene1940;Dbxref=Genbank:WP_012304174.1;Name=WP_012304174.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304174.1;transl_table=11 NC_010634.1 RefSeq gene 2131015 2131221 . - . ID=gene1941;Name=YPTS_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09740;old_locus_tag=YPTS_1911 NC_010634.1 Protein Homology CDS 2131015 2131221 . - 0 ID=cds1870;Parent=gene1941;Dbxref=Genbank:WP_012304173.1;Name=WP_012304173.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304173.1;transl_table=11 NC_010634.1 RefSeq gene 2131233 2131436 . - . ID=gene1942;Name=YPTS_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09745;old_locus_tag=YPTS_1912 NC_010634.1 Protein Homology CDS 2131233 2131436 . - 0 ID=cds1871;Parent=gene1942;Dbxref=Genbank:WP_012304172.1;Name=WP_012304172.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_012304172.1;transl_table=11 NC_010634.1 RefSeq gene 2131449 2131640 . - . ID=gene1943;Name=YPTS_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09750;old_locus_tag=YPTS_1913 NC_010634.1 Protein Homology CDS 2131449 2131640 . - 0 ID=cds1872;Parent=gene1943;Dbxref=Genbank:WP_012304171.1;Name=WP_012304171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304171.1;transl_table=11 NC_010634.1 RefSeq gene 2131701 2132069 . + . ID=gene1944;Name=YPTS_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09755;old_locus_tag=YPTS_1914 NC_010634.1 Protein Homology CDS 2131701 2132069 . + 0 ID=cds1873;Parent=gene1944;Dbxref=Genbank:WP_011192328.1;Name=WP_011192328.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_011192328.1;transl_table=11 NC_010634.1 RefSeq gene 2132090 2133787 . + . ID=gene1945;Name=YPTS_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09760;old_locus_tag=YPTS_1915 NC_010634.1 Protein Homology CDS 2132090 2133787 . + 0 ID=cds1874;Parent=gene1945;Dbxref=Genbank:WP_011192329.1;Name=WP_011192329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192329.1;transl_table=11 NC_010634.1 RefSeq gene 2133808 2134227 . + . ID=gene1946;Name=YPTS_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09765 NC_010634.1 Protein Homology CDS 2133808 2134227 . + 0 ID=cds1875;Parent=gene1946;Dbxref=Genbank:WP_011192330.1;Name=WP_011192330.1;gbkey=CDS;product=integrase;protein_id=WP_011192330.1;transl_table=11 NC_010634.1 RefSeq gene 2134296 2134676 . + . ID=gene1947;Name=YPTS_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09770;old_locus_tag=YPTS_1917 NC_010634.1 Protein Homology CDS 2134296 2134676 . + 0 ID=cds1876;Parent=gene1947;Dbxref=Genbank:WP_011192331.1;Name=WP_011192331.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192331.1;transl_table=11 NC_010634.1 RefSeq gene 2134676 2135679 . + . ID=gene1948;Name=YPTS_RS09775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS09775;pseudo=true NC_010634.1 Protein Homology CDS 2134676 2135679 . + 0 ID=cds1877;Parent=gene1948;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 2135797 2135919 . + . ID=id142;gbkey=repeat_region NC_010634.1 RefSeq gene 2135990 2136214 . - . ID=gene1949;Name=YPTS_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09780;old_locus_tag=YPTS_1920 NC_010634.1 Protein Homology CDS 2135990 2136214 . - 0 ID=cds1878;Parent=gene1949;Dbxref=Genbank:WP_012413690.1;Name=WP_012413690.1;gbkey=CDS;product=integrase;protein_id=WP_012413690.1;transl_table=11 NC_010634.1 RefSeq gene 2136147 2136662 . - . ID=gene1950;Name=YPTS_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09785 NC_010634.1 Protein Homology CDS 2136147 2136662 . - 0 ID=cds1879;Parent=gene1950;Dbxref=Genbank:WP_032467056.1;Name=WP_032467056.1;gbkey=CDS;product=integrase;protein_id=WP_032467056.1;transl_table=11 NC_010634.1 RefSeq gene 2136773 2137000 . + . ID=gene1951;Name=YPTS_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09790 NC_010634.1 Protein Homology CDS 2136773 2137000 . + 0 ID=cds1880;Parent=gene1951;Dbxref=Genbank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002215401.1;transl_table=11 NC_010634.1 RefSeq gene 2137394 2137516 . + . ID=gene1952;Name=YPTS_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09795;old_locus_tag=YPTS_1922 NC_010634.1 Protein Homology CDS 2137394 2137516 . + 0 ID=cds1881;Parent=gene1952;Dbxref=Genbank:WP_002213228.1;Name=WP_002213228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213228.1;transl_table=11 NC_010634.1 RefSeq gene 2138337 2138642 . - . ID=gene1953;Name=YPTS_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09800;old_locus_tag=YPTS_1926 NC_010634.1 Protein Homology CDS 2138337 2138642 . - 0 ID=cds1882;Parent=gene1953;Dbxref=Genbank:WP_012413694.1;Name=WP_012413694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413694.1;transl_table=11 NC_010634.1 RefSeq gene 2138668 2139012 . - . ID=gene1954;Name=YPTS_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09805;old_locus_tag=YPTS_1927 NC_010634.1 Protein Homology CDS 2138668 2139012 . - 0 ID=cds1883;Parent=gene1954;Dbxref=Genbank:WP_011192335.1;Name=WP_011192335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192335.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2139196 2140811 . + . ID=id143;gbkey=repeat_region NC_010634.1 RefSeq gene 2139232 2140191 . - . ID=gene1955;Name=YPTS_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09810;old_locus_tag=YPTS_1928 NC_010634.1 Protein Homology CDS 2139232 2140191 . - 0 ID=cds1884;Parent=gene1955;Dbxref=Genbank:WP_011192336.1;Name=WP_011192336.1;gbkey=CDS;product=integrase;protein_id=WP_011192336.1;transl_table=11 NC_010634.1 RefSeq gene 2140263 2140745 . - . ID=gene1956;Name=YPTS_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09815;old_locus_tag=YPTS_1929 NC_010634.1 Protein Homology CDS 2140263 2140745 . - 0 ID=cds1885;Parent=gene1956;Dbxref=Genbank:WP_032465626.1;Name=WP_032465626.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_032465626.1;transl_table=11 NC_010634.1 RefSeq gene 2141702 2142970 . + . ID=gene1957;Name=YPTS_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09820;old_locus_tag=YPTS_1931 NC_010634.1 Protein Homology CDS 2141702 2142970 . + 0 ID=cds1886;Parent=gene1957;Dbxref=Genbank:WP_012413696.1;Name=WP_012413696.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012413696.1;transl_table=11 NC_010634.1 RefSeq gene 2142967 2144700 . + . ID=gene1958;Name=YPTS_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09825;old_locus_tag=YPTS_1932 NC_010634.1 Protein Homology CDS 2142967 2144700 . + 0 ID=cds1887;Parent=gene1958;Dbxref=Genbank:WP_011192338.1;Name=WP_011192338.1;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=WP_011192338.1;transl_table=11 NC_010634.1 RefSeq gene 2144690 2145415 . + . ID=gene1959;Name=YPTS_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09830;old_locus_tag=YPTS_1933 NC_010634.1 Protein Homology CDS 2144690 2145415 . + 0 ID=cds1888;Parent=gene1959;Dbxref=Genbank:WP_011192339.1;Name=WP_011192339.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase 1;protein_id=WP_011192339.1;transl_table=11 NC_010634.1 RefSeq gene 2145403 2146257 . + . ID=gene1960;Name=YPTS_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09835;old_locus_tag=YPTS_1934 NC_010634.1 Protein Homology CDS 2145403 2146257 . + 0 ID=cds1889;Parent=gene1960;Dbxref=Genbank:WP_011192340.1;Name=WP_011192340.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192340.1;transl_table=11 NC_010634.1 RefSeq gene 2146242 2147054 . + . ID=gene1961;Name=YPTS_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09840;old_locus_tag=YPTS_1935 NC_010634.1 Protein Homology CDS 2146242 2147054 . + 0 ID=cds1890;Parent=gene1961;Dbxref=Genbank:WP_011192341.1;Name=WP_011192341.1;gbkey=CDS;product=methyltransferase type 11;protein_id=WP_011192341.1;transl_table=11 NC_010634.1 RefSeq gene 2147051 2148217 . + . ID=gene1962;Name=YPTS_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09845;old_locus_tag=YPTS_1936 NC_010634.1 Protein Homology CDS 2147051 2148217 . + 0 ID=cds1891;Parent=gene1962;Dbxref=Genbank:WP_011192342.1;Name=WP_011192342.1;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_011192342.1;transl_table=11 NC_010634.1 RefSeq gene 2148276 2148749 . + . ID=gene1963;Name=YPTS_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09850;old_locus_tag=YPTS_1937 NC_010634.1 Protein Homology CDS 2148276 2148749 . + 0 ID=cds1892;Parent=gene1963;Dbxref=Genbank:WP_024063244.1;Name=WP_024063244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063244.1;transl_table=11 NC_010634.1 RefSeq gene 2148785 2149012 . - . ID=gene1964;Name=YPTS_RS09855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS09855;old_locus_tag=YPTS_1938;partial=true;pseudo=true;start_range=.,2148785 NC_010634.1 Protein Homology CDS 2148785 2149012 . - 0 ID=cds1893;Parent=gene1964;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2148785;transl_table=11 NC_010634.1 RefSeq repeat_region 2149383 2150999 . + . ID=id144;gbkey=repeat_region NC_010634.1 RefSeq gene 2149419 2150378 . - . ID=gene1965;Name=YPTS_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09860;old_locus_tag=YPTS_1939 NC_010634.1 Protein Homology CDS 2149419 2150378 . - 0 ID=cds1894;Parent=gene1965;Dbxref=Genbank:WP_011192345.1;Name=WP_011192345.1;gbkey=CDS;product=integrase;protein_id=WP_011192345.1;transl_table=11 NC_010634.1 RefSeq gene 2150604 2150933 . - . ID=gene1966;Name=YPTS_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09865;old_locus_tag=YPTS_1940 NC_010634.1 Protein Homology CDS 2150604 2150933 . - 0 ID=cds1895;Parent=gene1966;Dbxref=Genbank:WP_012413698.1;Name=WP_012413698.1;gbkey=CDS;product=transposase;protein_id=WP_012413698.1;transl_table=11 NC_010634.1 RefSeq gene 2150981 2151121 . - . ID=gene1967;Name=YPTS_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09870;old_locus_tag=YPTS_1941 NC_010634.1 Protein Homology CDS 2150981 2151121 . - 0 ID=cds1896;Parent=gene1967;Dbxref=Genbank:WP_012413699.1;Name=WP_012413699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413699.1;transl_table=11 NC_010634.1 RefSeq gene 2151267 2151545 . - . ID=gene1968;Name=YPTS_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09875;old_locus_tag=YPTS_1942 NC_010634.1 Protein Homology CDS 2151267 2151545 . - 0 ID=cds1897;Parent=gene1968;Dbxref=Genbank:WP_012413700.1;Name=WP_012413700.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413700.1;transl_table=11 NC_010634.1 RefSeq gene 2151526 2151831 . - . ID=gene1969;Name=YPTS_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09880;old_locus_tag=YPTS_1943 NC_010634.1 Protein Homology CDS 2151526 2151831 . - 0 ID=cds1898;Parent=gene1969;Dbxref=Genbank:WP_011192347.1;Name=WP_011192347.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192347.1;transl_table=11 NC_010634.1 RefSeq gene 2151828 2152043 . - . ID=gene1970;Name=YPTS_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09885;old_locus_tag=YPTS_1944 NC_010634.1 Protein Homology CDS 2151828 2152043 . - 0 ID=cds1899;Parent=gene1970;Dbxref=Genbank:WP_002215412.1;Name=WP_002215412.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215412.1;transl_table=11 NC_010634.1 RefSeq gene 2152478 2152765 . - . ID=gene1971;Name=YPTS_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09890 NC_010634.1 Protein Homology CDS 2152478 2152765 . - 0 ID=cds1900;Parent=gene1971;Dbxref=Genbank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215413.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2152534 2152797 . + . ID=id145;gbkey=repeat_region NC_010634.1 RefSeq gene 2152782 2153081 . - . ID=gene1972;Name=YPTS_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09895;old_locus_tag=YPTS_1945 NC_010634.1 Protein Homology CDS 2152782 2153081 . - 0 ID=cds1901;Parent=gene1972;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2152839 2153071 . + . ID=id146;gbkey=repeat_region NC_010634.1 RefSeq gene 2153078 2153332 . - . ID=gene1973;Name=YPTS_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09900 NC_010634.1 Protein Homology CDS 2153078 2153332 . - 0 ID=cds1902;Parent=gene1973;Dbxref=Genbank:WP_032467055.1;Name=WP_032467055.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_032467055.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2153118 2153397 . + . ID=id147;gbkey=repeat_region NC_010634.1 RefSeq gene 2153468 2153740 . + . ID=gene1974;Name=YPTS_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09905;old_locus_tag=YPTS_1947 NC_010634.1 Protein Homology CDS 2153468 2153740 . + 0 ID=cds1903;Parent=gene1974;Dbxref=Genbank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;product=toxin;protein_id=WP_002213210.1;transl_table=11 NC_010634.1 RefSeq gene 2153721 2154011 . + . ID=gene1975;Name=YPTS_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09910;old_locus_tag=YPTS_1948 NC_010634.1 Protein Homology CDS 2153721 2154011 . + 0 ID=cds1904;Parent=gene1975;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11 NC_010634.1 RefSeq gene 2154077 2155153 . + . ID=gene1976;Name=YPTS_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09915;old_locus_tag=YPTS_1949 NC_010634.1 Protein Homology CDS 2154077 2155153 . + 0 ID=cds1905;Parent=gene1976;Dbxref=Genbank:WP_002213208.1;Name=WP_002213208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213208.1;transl_table=11 NC_010634.1 RefSeq gene 2155201 2156399 . + . ID=gene1977;Name=YPTS_RS09920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS09920;pseudo=true NC_010634.1 Protein Homology CDS 2155201 2156399 . + 0 ID=cds1906;Parent=gene1977;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 2156056 2156203 . + . ID=id148;gbkey=repeat_region NC_010634.1 RefSeq gene 2156817 2157386 . - . ID=gene1978;Name=YPTS_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09925;old_locus_tag=YPTS_1953 NC_010634.1 Protein Homology CDS 2156817 2157386 . - 0 ID=cds1907;Parent=gene1978;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NC_010634.1 RefSeq gene 2157398 2157832 . - . ID=gene1979;Name=YPTS_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09930;old_locus_tag=YPTS_1954 NC_010634.1 Protein Homology CDS 2157398 2157832 . - 0 ID=cds1908;Parent=gene1979;Dbxref=Genbank:WP_011192350.1;Name=WP_011192350.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192350.1;transl_table=11 NC_010634.1 RefSeq gene 2158510 2158614 . + . ID=gene1980;Name=YPTS_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09935 NC_010634.1 Protein Homology CDS 2158510 2158614 . + 0 ID=cds1909;Parent=gene1980;Dbxref=Genbank:WP_002215419.1;Name=WP_002215419.1;gbkey=CDS;product=transposase;protein_id=WP_002215419.1;transl_table=11 NC_010634.1 RefSeq gene 2158801 2159598 . + . ID=gene1981;Name=YPTS_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09940;old_locus_tag=YPTS_1958 NC_010634.1 Protein Homology CDS 2158801 2159598 . + 0 ID=cds1910;Parent=gene1981;Dbxref=Genbank:WP_002213201.1;Name=WP_002213201.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NC_010634.1 RefSeq gene 2159568 2159858 . - . ID=gene1982;Name=YPTS_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09945;old_locus_tag=YPTS_1959 NC_010634.1 Protein Homology CDS 2159568 2159858 . - 0 ID=cds1911;Parent=gene1982;Dbxref=Genbank:WP_041175566.1;Name=WP_041175566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_041175566.1;transl_table=11 NC_010634.1 RefSeq gene 2160266 2161279 . + . ID=gene1983;Name=YPTS_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09950;old_locus_tag=YPTS_1961 NC_010634.1 Protein Homology CDS 2160266 2161279 . + 0 ID=cds1912;Parent=gene1983;Dbxref=Genbank:WP_011192351.1;Name=WP_011192351.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_011192351.1;transl_table=11 NC_010634.1 RefSeq gene 2161356 2162576 . + . ID=gene1984;Name=YPTS_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09955;old_locus_tag=YPTS_1962 NC_010634.1 Protein Homology CDS 2161356 2162576 . + 0 ID=cds1913;Parent=gene1984;Dbxref=Genbank:WP_012413702.1;Name=WP_012413702.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_012413702.1;transl_table=11 NC_010634.1 RefSeq gene 2162643 2163503 . + . ID=gene1985;Name=YPTS_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09960;old_locus_tag=YPTS_1963 NC_010634.1 Protein Homology CDS 2162643 2163503 . + 0 ID=cds1914;Parent=gene1985;Dbxref=Genbank:WP_002213188.1;Name=WP_002213188.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NC_010634.1 RefSeq gene 2163496 2164323 . + . ID=gene1986;Name=YPTS_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09965;old_locus_tag=YPTS_1964 NC_010634.1 Protein Homology CDS 2163496 2164323 . + 0 ID=cds1915;Parent=gene1986;Dbxref=Genbank:WP_012413703.1;Name=WP_012413703.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012413703.1;transl_table=11 NC_010634.1 RefSeq gene 2164348 2165490 . + . ID=gene1987;Name=YPTS_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09970;old_locus_tag=YPTS_1965 NC_010634.1 Protein Homology CDS 2164348 2165490 . + 0 ID=cds1916;Parent=gene1987;Dbxref=Genbank:WP_011192353.1;Name=WP_011192353.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192353.1;transl_table=11 NC_010634.1 RefSeq gene 2165500 2165735 . - . ID=gene1988;Name=YPTS_RS09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS09975;pseudo=true NC_010634.1 Protein Homology CDS 2165500 2165735 . - 0 ID=cds1917;Parent=gene1988;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 2165794 2165900 . + . ID=id149;gbkey=repeat_region NC_010634.1 RefSeq gene 2165795 2165870 . - . ID=gene1989;Name=YPTS_RS09980;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS09980;old_locus_tag=YPTS_R0070 NC_010634.1 tRNAscan-SE tRNA 2165795 2165870 . - . ID=rna64;Parent=gene1989;anticodon=(pos:complement(2165835..2165837));gbkey=tRNA;product=tRNA-Asn NC_010634.1 tRNAscan-SE exon 2165795 2165870 . - . ID=id150;Parent=rna64;anticodon=(pos:complement(2165835..2165837));gbkey=tRNA;product=tRNA-Asn NC_010634.1 RefSeq gene 2166173 2166913 . - . ID=gene1990;Name=YPTS_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09985;old_locus_tag=YPTS_1966 NC_010634.1 Protein Homology CDS 2166173 2166913 . - 0 ID=cds1918;Parent=gene1990;Dbxref=Genbank:WP_002227954.1;Name=WP_002227954.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002227954.1;transl_table=11 NC_010634.1 RefSeq gene 2166910 2168259 . - . ID=gene1991;Name=YPTS_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09990;old_locus_tag=YPTS_1967 NC_010634.1 Protein Homology CDS 2166910 2168259 . - 0 ID=cds1919;Parent=gene1991;Dbxref=Genbank:WP_002213964.1;Name=WP_002213964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213964.1;transl_table=11 NC_010634.1 RefSeq gene 2168275 2170839 . - . ID=gene1992;Name=YPTS_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS09995;old_locus_tag=YPTS_1968 NC_010634.1 Protein Homology CDS 2168275 2170839 . - 0 ID=cds1920;Parent=gene1992;Dbxref=Genbank:WP_032466356.1;Name=WP_032466356.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_032466356.1;transl_table=11 NC_010634.1 RefSeq gene 2170915 2171646 . - . ID=gene1993;Name=YPTS_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10000;old_locus_tag=YPTS_1969 NC_010634.1 Protein Homology CDS 2170915 2171646 . - 0 ID=cds1921;Parent=gene1993;Dbxref=Genbank:WP_011192355.1;Name=WP_011192355.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_011192355.1;transl_table=11 NC_010634.1 RefSeq gene 2171739 2172269 . - . ID=gene1994;Name=YPTS_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10005;old_locus_tag=YPTS_1970 NC_010634.1 Protein Homology CDS 2171739 2172269 . - 0 ID=cds1922;Parent=gene1994;Dbxref=Genbank:WP_002213971.1;Name=WP_002213971.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002213971.1;transl_table=11 NC_010634.1 RefSeq gene 2172650 2176519 . - . ID=gene1995;Name=YPTS_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10010;old_locus_tag=YPTS_1971 NC_010634.1 Protein Homology CDS 2172650 2176519 . - 0 ID=cds1923;Parent=gene1995;Dbxref=Genbank:WP_041175568.1;Name=WP_041175568.1;gbkey=CDS;product=histidine kinase;protein_id=WP_041175568.1;transl_table=11 NC_010634.1 RefSeq gene 2176653 2177285 . - . ID=gene1996;Name=YPTS_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10015;old_locus_tag=YPTS_1972 NC_010634.1 Protein Homology CDS 2176653 2177285 . - 0 ID=cds1924;Parent=gene1996;Dbxref=Genbank:WP_002212073.1;Name=WP_002212073.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002212073.1;transl_table=11 NC_010634.1 RefSeq gene 2178112 2179434 . - . ID=gene1997;Name=YPTS_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10020;old_locus_tag=YPTS_1973 NC_010634.1 Protein Homology CDS 2178112 2179434 . - 0 ID=cds1925;Parent=gene1997;Dbxref=Genbank:WP_011192357.1;Name=WP_011192357.1;gbkey=CDS;product=4-hydroxybutyrate CoA-transferase;protein_id=WP_011192357.1;transl_table=11 NC_010634.1 RefSeq gene 2179457 2179984 . - . ID=gene1998;Name=YPTS_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10025;old_locus_tag=YPTS_1974 NC_010634.1 Protein Homology CDS 2179457 2179984 . - 0 ID=cds1926;Parent=gene1998;Dbxref=Genbank:WP_002212069.1;Name=WP_002212069.1;gbkey=CDS;product=molybdenum cofactor biosynthesis protein MoeC;protein_id=WP_002212069.1;transl_table=11 NC_010634.1 RefSeq gene 2180049 2180891 . - . ID=gene1999;Name=YPTS_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10030;old_locus_tag=YPTS_1975 NC_010634.1 Protein Homology CDS 2180049 2180891 . - 0 ID=cds1927;Parent=gene1999;Dbxref=Genbank:WP_002212068.1;Name=WP_002212068.1;gbkey=CDS;product=citrate lyase subunit beta;protein_id=WP_002212068.1;transl_table=11 NC_010634.1 RefSeq gene 2180986 2181864 . + . ID=gene2000;Name=YPTS_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10035;old_locus_tag=YPTS_1976 NC_010634.1 Protein Homology CDS 2180986 2181864 . + 0 ID=cds1928;Parent=gene2000;Dbxref=Genbank:WP_012105184.1;Name=WP_012105184.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012105184.1;transl_table=11 NC_010634.1 RefSeq gene 2181939 2182412 . - . ID=gene2001;Name=YPTS_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10040;old_locus_tag=YPTS_1977 NC_010634.1 Protein Homology CDS 2181939 2182412 . - 0 ID=cds1929;Parent=gene2001;Dbxref=Genbank:WP_011192359.1;Name=WP_011192359.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192359.1;transl_table=11 NC_010634.1 RefSeq gene 2182437 2182997 . - . ID=gene2002;Name=YPTS_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10045;old_locus_tag=YPTS_1978 NC_010634.1 Protein Homology CDS 2182437 2182997 . - 0 ID=cds1930;Parent=gene2002;Dbxref=Genbank:WP_011192360.1;Name=WP_011192360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192360.1;transl_table=11 NC_010634.1 RefSeq gene 2183217 2184446 . - . ID=gene2003;Name=YPTS_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10050;old_locus_tag=YPTS_1979 NC_010634.1 Protein Homology CDS 2183217 2184446 . - 0 ID=cds1931;Parent=gene2003;Dbxref=Genbank:WP_002212064.1;Name=WP_002212064.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002212064.1;transl_table=11 NC_010634.1 RefSeq gene 2184512 2185381 . - . ID=gene2004;Name=YPTS_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10055;old_locus_tag=YPTS_1980 NC_010634.1 Protein Homology CDS 2184512 2185381 . - 0 ID=cds1932;Parent=gene2004;Dbxref=Genbank:WP_011192361.1;Name=WP_011192361.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_011192361.1;transl_table=11 NC_010634.1 RefSeq gene 2185493 2186455 . + . ID=gene2005;Name=YPTS_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10060;old_locus_tag=YPTS_1981 NC_010634.1 Protein Homology CDS 2185493 2186455 . + 0 ID=cds1933;Parent=gene2005;Dbxref=Genbank:WP_002212062.1;Name=WP_002212062.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212062.1;transl_table=11 NC_010634.1 RefSeq gene 2186760 2187359 . - . ID=gene2006;Name=YPTS_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10065;old_locus_tag=YPTS_1982 NC_010634.1 Protein Homology CDS 2186760 2187359 . - 0 ID=cds1934;Parent=gene2006;Dbxref=Genbank:WP_002212061.1;Name=WP_002212061.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002212061.1;transl_table=11 NC_010634.1 RefSeq gene 2187711 2188871 . + . ID=gene2007;Name=YPTS_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10070;old_locus_tag=YPTS_1983 NC_010634.1 Protein Homology CDS 2187711 2188871 . + 0 ID=cds1935;Parent=gene2007;Dbxref=Genbank:WP_002212060.1;Name=WP_002212060.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002212060.1;transl_table=11 NC_010634.1 RefSeq gene 2189067 2190596 . - . ID=gene2008;Name=YPTS_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10075;old_locus_tag=YPTS_1984 NC_010634.1 Protein Homology CDS 2189067 2190596 . - 0 ID=cds1936;Parent=gene2008;Dbxref=Genbank:WP_002212059.1;Name=WP_002212059.1;Note=involved in the transporte of L-asparagine;gbkey=CDS;product=L-asparagine permease;protein_id=WP_002212059.1;transl_table=11 NC_010634.1 RefSeq gene 2191361 2192131 . - . ID=gene2009;Name=YPTS_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10080;old_locus_tag=YPTS_1985 NC_010634.1 Protein Homology CDS 2191361 2192131 . - 0 ID=cds1937;Parent=gene2009;Dbxref=Genbank:WP_002212058.1;Name=WP_002212058.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002212058.1;transl_table=11 NC_010634.1 RefSeq gene 2192684 2192890 . + . ID=gene2010;Name=YPTS_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10085 NC_010634.1 Protein Homology CDS 2192684 2192890 . + 0 ID=cds1938;Parent=gene2010;Dbxref=Genbank:WP_002213974.1;Name=WP_002213974.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002213974.1;transl_table=11 NC_010634.1 RefSeq gene 2193342 2194349 . + . ID=gene2011;Name=YPTS_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10090;old_locus_tag=YPTS_1986 NC_010634.1 Protein Homology CDS 2193342 2194349 . + 0 ID=cds1939;Parent=gene2011;Dbxref=Genbank:WP_002212056.1;Name=WP_002212056.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002212056.1;transl_table=11 NC_010634.1 RefSeq gene 2194460 2196100 . + . ID=gene2012;Name=YPTS_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10095;old_locus_tag=YPTS_1987 NC_010634.1 Protein Homology CDS 2194460 2196100 . + 0 ID=cds1940;Parent=gene2012;Dbxref=Genbank:WP_002213976.1;Name=WP_002213976.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213976.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2196107 2196274 . + . ID=id151;gbkey=repeat_region NC_010634.1 RefSeq gene 2196700 2198619 . + . ID=gene2013;Name=YPTS_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10100;old_locus_tag=YPTS_1988 NC_010634.1 Protein Homology CDS 2196700 2198619 . + 0 ID=cds1941;Parent=gene2013;Dbxref=Genbank:WP_011192362.1;Name=WP_011192362.1;gbkey=CDS;product=iron permease;protein_id=WP_011192362.1;transl_table=11 NC_010634.1 RefSeq gene 2198823 2199350 . + . ID=gene2014;Name=YPTS_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10105;old_locus_tag=YPTS_1989 NC_010634.1 Protein Homology CDS 2198823 2199350 . + 0 ID=cds1942;Parent=gene2014;Dbxref=Genbank:WP_002212053.1;Name=WP_002212053.1;gbkey=CDS;product=iron transporter;protein_id=WP_002212053.1;transl_table=11 NC_010634.1 RefSeq gene 2199651 2201060 . + . ID=gene2015;Name=YPTS_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10110;old_locus_tag=YPTS_1991 NC_010634.1 Protein Homology CDS 2199651 2201060 . + 0 ID=cds1943;Parent=gene2015;Dbxref=Genbank:WP_002212052.1;Name=WP_002212052.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212052.1;transl_table=11 NC_010634.1 RefSeq gene 2201063 2202355 . + . ID=gene2016;Name=YPTS_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10115;old_locus_tag=YPTS_1992 NC_010634.1 Protein Homology CDS 2201063 2202355 . + 0 ID=cds1944;Parent=gene2016;Dbxref=Genbank:WP_002212051.1;Name=WP_002212051.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212051.1;transl_table=11 NC_010634.1 RefSeq gene 2202378 2203526 . + . ID=gene2017;Name=YPTS_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10120;old_locus_tag=YPTS_1993 NC_010634.1 Protein Homology CDS 2202378 2203526 . + 0 ID=cds1945;Parent=gene2017;Dbxref=Genbank:WP_042592836.1;Name=WP_042592836.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_042592836.1;transl_table=11 NC_010634.1 RefSeq gene 2203530 2204243 . + . ID=gene2018;Name=YPTS_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10125;old_locus_tag=YPTS_1994 NC_010634.1 Protein Homology CDS 2203530 2204243 . + 0 ID=cds1946;Parent=gene2018;Dbxref=Genbank:WP_011192364.1;Name=WP_011192364.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_011192364.1;transl_table=11 NC_010634.1 RefSeq gene 2204233 2204730 . + . ID=gene2019;Name=YPTS_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10130;old_locus_tag=YPTS_1995 NC_010634.1 Protein Homology CDS 2204233 2204730 . + 0 ID=cds1947;Parent=gene2019;Dbxref=Genbank:WP_002212048.1;Name=WP_002212048.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002212048.1;transl_table=11 NC_010634.1 RefSeq gene 2204730 2205041 . + . ID=gene2020;Name=YPTS_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10135;old_locus_tag=YPTS_1996 NC_010634.1 Protein Homology CDS 2204730 2205041 . + 0 ID=cds1948;Parent=gene2020;Dbxref=Genbank:WP_002227951.1;Name=WP_002227951.1;gbkey=CDS;product=cytochrome;protein_id=WP_002227951.1;transl_table=11 NC_010634.1 RefSeq gene 2205214 2206101 . + . ID=gene2021;Name=YPTS_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10140;old_locus_tag=YPTS_1997 NC_010634.1 Protein Homology CDS 2205214 2206101 . + 0 ID=cds1949;Parent=gene2021;Dbxref=Genbank:WP_002212046.1;Name=WP_002212046.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;product=tellurite resistance methyltransferase TehB;protein_id=WP_002212046.1;transl_table=11 NC_010634.1 RefSeq gene 2206242 2207459 . + . ID=gene2022;Name=YPTS_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10145;old_locus_tag=YPTS_1998 NC_010634.1 Protein Homology CDS 2206242 2207459 . + 0 ID=cds1950;Parent=gene2022;Dbxref=Genbank:WP_011192365.1;Name=WP_011192365.1;gbkey=CDS;product=peptidase M24;protein_id=WP_011192365.1;transl_table=11 NC_010634.1 RefSeq gene 2208128 2210596 . + . ID=gene2023;Name=hmsH;gbkey=Gene;gene=hmsH;gene_biotype=protein_coding;locus_tag=YPTS_RS10150;old_locus_tag=YPTS_1999 NC_010634.1 Protein Homology CDS 2208128 2210596 . + 0 ID=cds1951;Parent=gene2023;Dbxref=Genbank:WP_011192366.1;Name=WP_011192366.1;Note=in Yersinia this protein is important for biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsH;product=hypothetical protein;protein_id=WP_011192366.1;transl_table=11 NC_010634.1 RefSeq gene 2210609 2212630 . + . ID=gene2024;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=YPTS_RS10155;old_locus_tag=YPTS_2000 NC_010634.1 Protein Homology CDS 2210609 2212630 . + 0 ID=cds1952;Parent=gene2024;Dbxref=Genbank:WP_002212043.1;Name=WP_002212043.1;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export;gbkey=CDS;gene=pgaB;product=biofilm PGA synthesis lipoprotein PgaB;protein_id=WP_002212043.1;transl_table=11 NC_010634.1 RefSeq gene 2212620 2213954 . + . ID=gene2025;Name=YPTS_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10160;old_locus_tag=YPTS_2001 NC_010634.1 Protein Homology CDS 2212620 2213954 . + 0 ID=cds1953;Parent=gene2025;Dbxref=Genbank:WP_002224456.1;Name=WP_002224456.1;Note=predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein;gbkey=CDS;product=N-glycosyltransferase;protein_id=WP_002224456.1;transl_table=11 NC_010634.1 RefSeq gene 2213951 2214418 . + . ID=gene2026;Name=hmsS;gbkey=Gene;gene=hmsS;gene_biotype=protein_coding;locus_tag=YPTS_RS10165;old_locus_tag=YPTS_2002 NC_010634.1 Protein Homology CDS 2213951 2214418 . + 0 ID=cds1954;Parent=gene2026;Dbxref=Genbank:WP_011192367.1;Name=WP_011192367.1;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsS;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_011192367.1;transl_table=11 NC_010634.1 RefSeq gene 2214940 2215650 . + . ID=gene2027;Name=YPTS_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10170 NC_010634.1 Protein Homology CDS 2214940 2215650 . + 0 ID=cds1955;Parent=gene2027;Dbxref=Genbank:WP_002367661.1;Name=WP_002367661.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002367661.1;transl_table=11 NC_010634.1 RefSeq gene 2216089 2216367 . + . ID=gene2028;Name=YPTS_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10175;old_locus_tag=YPTS_2004 NC_010634.1 Protein Homology CDS 2216089 2216367 . + 0 ID=cds1956;Parent=gene2028;Dbxref=Genbank:WP_002212038.1;Name=WP_002212038.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212038.1;transl_table=11 NC_010634.1 RefSeq gene 2216427 2217215 . + . ID=gene2029;Name=YPTS_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10180;old_locus_tag=YPTS_2005 NC_010634.1 Protein Homology CDS 2216427 2217215 . + 0 ID=cds1957;Parent=gene2029;Dbxref=Genbank:WP_002212037.1;Name=WP_002212037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212037.1;transl_table=11 NC_010634.1 RefSeq gene 2217318 2218418 . - . ID=gene2030;Name=YPTS_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10185;old_locus_tag=YPTS_2006 NC_010634.1 Protein Homology CDS 2217318 2218418 . - 0 ID=cds1958;Parent=gene2030;Dbxref=Genbank:WP_002212036.1;Name=WP_002212036.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002212036.1;transl_table=11 NC_010634.1 RefSeq gene 2218968 2220749 . - . ID=gene2031;Name=YPTS_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10190;old_locus_tag=YPTS_2007 NC_010634.1 Protein Homology CDS 2218968 2220749 . - 0 ID=cds1959;Parent=gene2031;Dbxref=Genbank:WP_012413705.1;Name=WP_012413705.1;gbkey=CDS;product=nitrate/nitrite two-component system sensor histidine kinase;protein_id=WP_012413705.1;transl_table=11 NC_010634.1 RefSeq gene 2221059 2222480 . + . ID=gene2032;Name=YPTS_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10195;old_locus_tag=YPTS_2008 NC_010634.1 Protein Homology CDS 2221059 2222480 . + 0 ID=cds1960;Parent=gene2032;Dbxref=Genbank:WP_002212033.1;Name=WP_002212033.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212033.1;transl_table=11 NC_010634.1 RefSeq gene 2222782 2222925 . + . ID=gene2033;Name=YPTS_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10200;old_locus_tag=YPTS_2010 NC_010634.1 Protein Homology CDS 2222782 2222925 . + 0 ID=cds1961;Parent=gene2033;Dbxref=Genbank:WP_002353347.1;Name=WP_002353347.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353347.1;transl_table=11 NC_010634.1 RefSeq gene 2223123 2224367 . + . ID=gene2034;Name=YPTS_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10205;old_locus_tag=YPTS_2011 NC_010634.1 Protein Homology CDS 2223123 2224367 . + 0 ID=cds1962;Parent=gene2034;Dbxref=Genbank:WP_002216140.1;Name=WP_002216140.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;gbkey=CDS;product=succinylornithine aminotransferase;protein_id=WP_002216140.1;transl_table=11 NC_010634.1 RefSeq gene 2224397 2225449 . + . ID=gene2035;Name=YPTS_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10210;old_locus_tag=YPTS_2012 NC_010634.1 Protein Homology CDS 2224397 2225449 . + 0 ID=cds1963;Parent=gene2035;Dbxref=Genbank:WP_011192371.1;Name=WP_011192371.1;gbkey=CDS;product=arginine N-succinyltransferase;protein_id=WP_011192371.1;transl_table=11 NC_010634.1 RefSeq gene 2225446 2226963 . + . ID=gene2036;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=YPTS_RS10215;old_locus_tag=YPTS_2013 NC_010634.1 Protein Homology CDS 2225446 2226963 . + 0 ID=cds1964;Parent=gene2036;Dbxref=Genbank:WP_011192372.1;Name=WP_011192372.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;product=N-succinylglutamate 5-semialdehyde dehydrogenase;protein_id=WP_011192372.1;transl_table=11 NC_010634.1 RefSeq gene 2226987 2228330 . + . ID=gene2037;Name=YPTS_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10220;old_locus_tag=YPTS_2014 NC_010634.1 Protein Homology CDS 2226987 2228330 . + 0 ID=cds1965;Parent=gene2037;Dbxref=Genbank:WP_002212029.1;Name=WP_002212029.1;gbkey=CDS;product=N-succinylarginine dihydrolase;protein_id=WP_002212029.1;transl_table=11 NC_010634.1 RefSeq gene 2228391 2229383 . + . ID=gene2038;Name=YPTS_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10225;old_locus_tag=YPTS_2015 NC_010634.1 Protein Homology CDS 2228391 2229383 . + 0 ID=cds1966;Parent=gene2038;Dbxref=Genbank:WP_002212028.1;Name=WP_002212028.1;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=WP_002212028.1;transl_table=11 NC_010634.1 RefSeq gene 2230091 2230786 . + . ID=gene2039;Name=YPTS_RS10230;end_range=2230786,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS10230;old_locus_tag=YPTS_2016;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 2230091 2230786 . + 0 ID=cds1967;Parent=gene2039;end_range=2230786,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=porin;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 2230766 2232721 . + . ID=id152;gbkey=repeat_region NC_010634.1 RefSeq gene 2230833 2231612 . - . ID=gene2040;Name=YPTS_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10235;old_locus_tag=YPTS_2017 NC_010634.1 Protein Homology CDS 2230833 2231612 . - 0 ID=cds1968;Parent=gene2040;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_010634.1 RefSeq gene 2231612 2232634 . - . ID=gene2041;Name=YPTS_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10240;old_locus_tag=YPTS_2018 NC_010634.1 Protein Homology CDS 2231612 2232634 . - 0 ID=cds1969;Parent=gene2041;Dbxref=Genbank:WP_012413427.1;Name=WP_012413427.1;gbkey=CDS;product=transposase;protein_id=WP_012413427.1;transl_table=11 NC_010634.1 RefSeq gene 2232747 2233133 . + . ID=gene2042;Name=YPTS_RS10245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS10245;old_locus_tag=YPTS_2019;partial=true;pseudo=true;start_range=.,2232747 NC_010634.1 Protein Homology CDS 2232747 2233133 . + 0 ID=cds1970;Parent=gene2042;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=porin;pseudo=true;start_range=.,2232747;transl_table=11 NC_010634.1 RefSeq gene 2233728 2234534 . - . ID=gene2043;Name=YPTS_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10250;old_locus_tag=YPTS_2020 NC_010634.1 Protein Homology CDS 2233728 2234534 . - 0 ID=cds1971;Parent=gene2043;Dbxref=Genbank:WP_011192373.1;Name=WP_011192373.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_011192373.1;transl_table=11 NC_010634.1 RefSeq gene 2234531 2235751 . - . ID=gene2044;Name=YPTS_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10255;old_locus_tag=YPTS_2021 NC_010634.1 Protein Homology CDS 2234531 2235751 . - 0 ID=cds1972;Parent=gene2044;Dbxref=Genbank:WP_011192374.1;Name=WP_011192374.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_011192374.1;transl_table=11 NC_010634.1 RefSeq gene 2235955 2236722 . - . ID=gene2045;Name=YPTS_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10260;old_locus_tag=YPTS_2022 NC_010634.1 Protein Homology CDS 2235955 2236722 . - 0 ID=cds1973;Parent=gene2045;Dbxref=Genbank:WP_011192375.1;Name=WP_011192375.1;gbkey=CDS;product=histidine utilization repressor;protein_id=WP_011192375.1;transl_table=11 NC_010634.1 RefSeq gene 2236870 2238240 . + . ID=gene2046;Name=YPTS_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10265;old_locus_tag=YPTS_2023 NC_010634.1 Protein Homology CDS 2236870 2238240 . + 0 ID=cds1974;Parent=gene2046;Dbxref=Genbank:WP_011192376.1;Name=WP_011192376.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_011192376.1;transl_table=11 NC_010634.1 RefSeq gene 2238240 2238812 . + . ID=gene2047;Name=YPTS_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10270;old_locus_tag=YPTS_2024 NC_010634.1 Protein Homology CDS 2238240 2238812 . + 0 ID=cds1975;Parent=gene2047;Dbxref=Genbank:WP_011192377.1;Name=WP_011192377.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192377.1;transl_table=11 NC_010634.1 RefSeq gene 2238990 2240609 . - . ID=gene2048;Name=YPTS_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10275;old_locus_tag=YPTS_2025 NC_010634.1 Protein Homology CDS 2238990 2240609 . - 0 ID=cds1976;Parent=gene2048;Dbxref=Genbank:WP_041175456.1;Name=WP_041175456.1;gbkey=CDS;product=chorismate-binding protein;protein_id=WP_041175456.1;transl_table=11 NC_010634.1 RefSeq gene 2241618 2242625 . + . ID=gene2049;Name=YPTS_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10280;old_locus_tag=YPTS_2026 NC_010634.1 Protein Homology CDS 2241618 2242625 . + 0 ID=cds1977;Parent=gene2049;Dbxref=Genbank:WP_011192379.1;Name=WP_011192379.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_011192379.1;transl_table=11 NC_010634.1 RefSeq gene 2242639 2243655 . + . ID=gene2050;Name=YPTS_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10285;old_locus_tag=YPTS_2027 NC_010634.1 Protein Homology CDS 2242639 2243655 . + 0 ID=cds1978;Parent=gene2050;Dbxref=Genbank:WP_011192380.1;Name=WP_011192380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192380.1;transl_table=11 NC_010634.1 RefSeq gene 2243648 2244454 . + . ID=gene2051;Name=YPTS_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10290;old_locus_tag=YPTS_2028 NC_010634.1 Protein Homology CDS 2243648 2244454 . + 0 ID=cds1979;Parent=gene2051;Dbxref=Genbank:WP_011192381.1;Name=WP_011192381.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_011192381.1;transl_table=11 NC_010634.1 RefSeq gene 2244451 2245737 . + . ID=gene2052;Name=YPTS_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10295;old_locus_tag=YPTS_2029 NC_010634.1 Protein Homology CDS 2244451 2245737 . + 0 ID=cds1980;Parent=gene2052;Dbxref=Genbank:WP_011192382.1;Name=WP_011192382.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_011192382.1;transl_table=11 NC_010634.1 RefSeq gene 2245871 2246833 . + . ID=gene2053;Name=YPTS_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10300;old_locus_tag=YPTS_2030 NC_010634.1 Protein Homology CDS 2245871 2246833 . + 0 ID=cds1981;Parent=gene2053;Dbxref=Genbank:WP_012413710.1;Name=WP_012413710.1;gbkey=CDS;product=NAD(P)H steroid dehydrogenase;protein_id=WP_012413710.1;transl_table=11 NC_010634.1 RefSeq gene 2246833 2247987 . + . ID=gene2054;Name=YPTS_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10305;old_locus_tag=YPTS_2031 NC_010634.1 Protein Homology CDS 2246833 2247987 . + 0 ID=cds1982;Parent=gene2054;Dbxref=Genbank:WP_011192384.1;Name=WP_011192384.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_011192384.1;transl_table=11 NC_010634.1 RefSeq gene 2247984 2248568 . + . ID=gene2055;Name=YPTS_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10310;old_locus_tag=YPTS_2032 NC_010634.1 Protein Homology CDS 2247984 2248568 . + 0 ID=cds1983;Parent=gene2055;Dbxref=Genbank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11 NC_010634.1 RefSeq gene 2248565 2249752 . + . ID=gene2056;Name=YPTS_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10315;old_locus_tag=YPTS_2033 NC_010634.1 Protein Homology CDS 2248565 2249752 . + 0 ID=cds1984;Parent=gene2056;Dbxref=Genbank:WP_011192385.1;Name=WP_011192385.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_011192385.1;transl_table=11 NC_010634.1 RefSeq gene 2249913 2250377 . - . ID=gene2057;Name=YPTS_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10320;old_locus_tag=YPTS_2034 NC_010634.1 Protein Homology CDS 2249913 2250377 . - 0 ID=cds1985;Parent=gene2057;Dbxref=Genbank:WP_011192386.1;Name=WP_011192386.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192386.1;transl_table=11 NC_010634.1 RefSeq gene 2250547 2252205 . - . ID=gene2058;Name=YPTS_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10325;old_locus_tag=YPTS_2035 NC_010634.1 Protein Homology CDS 2250547 2252205 . - 0 ID=cds1986;Parent=gene2058;Dbxref=Genbank:WP_038401542.1;Name=WP_038401542.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401542.1;transl_table=11 NC_010634.1 RefSeq gene 2252329 2254491 . - . ID=gene2059;Name=YPTS_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10330;old_locus_tag=YPTS_2036 NC_010634.1 Protein Homology CDS 2252329 2254491 . - 0 ID=cds1987;Parent=gene2059;Dbxref=Genbank:WP_011192388.1;Name=WP_011192388.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192388.1;transl_table=11 NC_010634.1 RefSeq gene 2255069 2257180 . + . ID=gene2060;Name=YPTS_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10335;old_locus_tag=YPTS_2038 NC_010634.1 Protein Homology CDS 2255069 2257180 . + 0 ID=cds1988;Parent=gene2060;Dbxref=Genbank:WP_011192389.1;Name=WP_011192389.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192389.1;transl_table=11 NC_010634.1 RefSeq gene 2257183 2257371 . - . ID=gene2061;Name=YPTS_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10340 NC_010634.1 Protein Homology CDS 2257183 2257371 . - 0 ID=cds1989;Parent=gene2061;Dbxref=Genbank:WP_032467051.1;Name=WP_032467051.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467051.1;transl_table=11 NC_010634.1 RefSeq gene 2257427 2258065 . + . ID=gene2062;Name=YPTS_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10345;old_locus_tag=YPTS_2039 NC_010634.1 Protein Homology CDS 2257427 2258065 . + 0 ID=cds1990;Parent=gene2062;Dbxref=Genbank:WP_002211263.1;Name=WP_002211263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211263.1;transl_table=11 NC_010634.1 RefSeq gene 2258200 2258859 . - . ID=gene2063;Name=YPTS_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10350;old_locus_tag=YPTS_2040 NC_010634.1 Protein Homology CDS 2258200 2258859 . - 0 ID=cds1991;Parent=gene2063;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11 NC_010634.1 RefSeq gene 2258964 2259644 . - . ID=gene2064;Name=YPTS_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10355;old_locus_tag=YPTS_2041 NC_010634.1 Protein Homology CDS 2258964 2259644 . - 0 ID=cds1992;Parent=gene2064;Dbxref=Genbank:WP_011192390.1;Name=WP_011192390.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_011192390.1;transl_table=11 NC_010634.1 RefSeq gene 2259985 2260935 . - . ID=gene2065;Name=YPTS_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10360;old_locus_tag=YPTS_2043 NC_010634.1 Protein Homology CDS 2259985 2260935 . - 0 ID=cds1993;Parent=gene2065;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NC_010634.1 RefSeq gene 2260922 2261854 . - . ID=gene2066;Name=YPTS_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10365;old_locus_tag=YPTS_2044 NC_010634.1 Protein Homology CDS 2260922 2261854 . - 0 ID=cds1994;Parent=gene2066;Dbxref=Genbank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NC_010634.1 RefSeq gene 2261860 2262765 . - . ID=gene2067;Name=YPTS_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10370;old_locus_tag=YPTS_2045 NC_010634.1 Protein Homology CDS 2261860 2262765 . - 0 ID=cds1995;Parent=gene2067;Dbxref=Genbank:WP_002211258.1;Name=WP_002211258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211258.1;transl_table=11 NC_010634.1 RefSeq gene 2263545 2264618 . - . ID=gene2068;Name=YPTS_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10375;old_locus_tag=YPTS_2046 NC_010634.1 Protein Homology CDS 2263545 2264618 . - 0 ID=cds1996;Parent=gene2068;Dbxref=Genbank:WP_011192391.1;Name=WP_011192391.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_011192391.1;transl_table=11 NC_010634.1 RefSeq gene 2264831 2265301 . - . ID=gene2069;Name=YPTS_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10380;old_locus_tag=YPTS_2047 NC_010634.1 Protein Homology CDS 2264831 2265301 . - 0 ID=cds1997;Parent=gene2069;Dbxref=Genbank:WP_002211256.1;Name=WP_002211256.1;gbkey=CDS;product=cupin;protein_id=WP_002211256.1;transl_table=11 NC_010634.1 RefSeq gene 2265356 2265778 . - . ID=gene2070;Name=YPTS_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10385;old_locus_tag=YPTS_2048 NC_010634.1 Protein Homology CDS 2265356 2265778 . - 0 ID=cds1998;Parent=gene2070;Dbxref=Genbank:WP_011192392.1;Name=WP_011192392.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_011192392.1;transl_table=11 NC_010634.1 RefSeq gene 2266055 2267440 . - . ID=gene2071;Name=YPTS_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10390;old_locus_tag=YPTS_2049 NC_010634.1 Protein Homology CDS 2266055 2267440 . - 0 ID=cds1999;Parent=gene2071;Dbxref=Genbank:WP_002211254.1;Name=WP_002211254.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11 NC_010634.1 RefSeq gene 2267452 2268144 . - . ID=gene2072;Name=YPTS_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10395;old_locus_tag=YPTS_2050 NC_010634.1 Protein Homology CDS 2267452 2268144 . - 0 ID=cds2000;Parent=gene2072;Dbxref=Genbank:WP_011192393.1;Name=WP_011192393.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_011192393.1;transl_table=11 NC_010634.1 RefSeq gene 2268409 2269500 . + . ID=gene2073;Name=YPTS_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10400;old_locus_tag=YPTS_2051 NC_010634.1 Protein Homology CDS 2268409 2269500 . + 0 ID=cds2001;Parent=gene2073;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11 NC_010634.1 RefSeq gene 2269691 2270356 . + . ID=gene2074;Name=YPTS_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10405;old_locus_tag=YPTS_2052 NC_010634.1 Protein Homology CDS 2269691 2270356 . + 0 ID=cds2002;Parent=gene2074;Dbxref=Genbank:WP_011192394.1;Name=WP_011192394.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_011192394.1;transl_table=11 NC_010634.1 RefSeq gene 2270371 2271066 . + . ID=gene2075;Name=YPTS_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10410;old_locus_tag=YPTS_2053 NC_010634.1 Protein Homology CDS 2270371 2271066 . + 0 ID=cds2003;Parent=gene2075;Dbxref=Genbank:WP_011192395.1;Name=WP_011192395.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192395.1;transl_table=11 NC_010634.1 RefSeq gene 2271273 2272115 . - . ID=gene2076;Name=YPTS_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10415;old_locus_tag=YPTS_2054 NC_010634.1 Protein Homology CDS 2271273 2272115 . - 0 ID=cds2004;Parent=gene2076;Dbxref=Genbank:WP_012413711.1;Name=WP_012413711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413711.1;transl_table=11 NC_010634.1 RefSeq gene 2272222 2273313 . - . ID=gene2077;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YPTS_RS10420;old_locus_tag=YPTS_2055 NC_010634.1 Protein Homology CDS 2272222 2273313 . - 0 ID=cds2005;Parent=gene2077;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11 NC_010634.1 RefSeq gene 2273478 2274068 . - . ID=gene2078;Name=YPTS_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10425;old_locus_tag=YPTS_2056 NC_010634.1 Protein Homology CDS 2273478 2274068 . - 0 ID=cds2006;Parent=gene2078;Dbxref=Genbank:WP_002218168.1;Name=WP_002218168.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_002218168.1;transl_table=11 NC_010634.1 RefSeq gene 2274430 2274702 . + . ID=gene2079;Name=YPTS_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10430;old_locus_tag=YPTS_2057 NC_010634.1 Protein Homology CDS 2274430 2274702 . + 0 ID=cds2007;Parent=gene2079;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11 NC_010634.1 RefSeq gene 2274693 2274806 . - . ID=gene2080;Name=YPTS_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10435 NC_010634.1 Protein Homology CDS 2274693 2274806 . - 0 ID=cds2008;Parent=gene2080;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11 NC_010634.1 RefSeq gene 2274904 2275851 . - . ID=gene2081;Name=YPTS_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10440;old_locus_tag=YPTS_2058 NC_010634.1 Protein Homology CDS 2274904 2275851 . - 0 ID=cds2009;Parent=gene2081;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11 NC_010634.1 RefSeq gene 2275901 2276011 . - . ID=gene2082;Name=YPTS_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10445 NC_010634.1 Protein Homology CDS 2275901 2276011 . - 0 ID=cds2010;Parent=gene2082;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11 NC_010634.1 RefSeq gene 2276192 2277091 . - . ID=gene2083;Name=YPTS_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10450;old_locus_tag=YPTS_2060 NC_010634.1 Protein Homology CDS 2276192 2277091 . - 0 ID=cds2011;Parent=gene2083;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NC_010634.1 RefSeq gene 2277093 2277716 . - . ID=gene2084;Name=YPTS_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10455;old_locus_tag=YPTS_2061 NC_010634.1 Protein Homology CDS 2277093 2277716 . - 0 ID=cds2012;Parent=gene2084;Dbxref=Genbank:WP_011192397.1;Name=WP_011192397.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_011192397.1;transl_table=11 NC_010634.1 RefSeq gene 2278022 2279284 . + . ID=gene2085;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YPTS_RS10460;old_locus_tag=YPTS_2062 NC_010634.1 Protein Homology CDS 2278022 2279284 . + 0 ID=cds2013;Parent=gene2085;Dbxref=Genbank:WP_002211237.1;Name=WP_002211237.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NC_010634.1 RefSeq gene 2279317 2280399 . + . ID=gene2086;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YPTS_RS10465;old_locus_tag=YPTS_2063 NC_010634.1 Protein Homology CDS 2279317 2280399 . + 0 ID=cds2014;Parent=gene2086;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NC_010634.1 RefSeq gene 2280399 2281229 . + . ID=gene2087;Name=YPTS_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10470;old_locus_tag=YPTS_2064 NC_010634.1 Protein Homology CDS 2280399 2281229 . + 0 ID=cds2015;Parent=gene2087;Dbxref=Genbank:WP_011192399.1;Name=WP_011192399.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_011192399.1;transl_table=11 NC_010634.1 RefSeq gene 2281293 2281694 . + . ID=gene2088;Name=YPTS_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10475;old_locus_tag=YPTS_2065 NC_010634.1 Protein Homology CDS 2281293 2281694 . + 0 ID=cds2016;Parent=gene2088;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11 NC_010634.1 RefSeq gene 2281691 2282500 . + . ID=gene2089;Name=YPTS_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10480;old_locus_tag=YPTS_2066 NC_010634.1 Protein Homology CDS 2281691 2282500 . + 0 ID=cds2017;Parent=gene2089;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11 NC_010634.1 RefSeq gene 2282596 2283450 . + . ID=gene2090;Name=YPTS_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10485;old_locus_tag=YPTS_2067 NC_010634.1 Protein Homology CDS 2282596 2283450 . + 0 ID=cds2018;Parent=gene2090;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2283785 2283958 . + . ID=id153;gbkey=repeat_region NC_010634.1 RefSeq gene 2283998 2285695 . - . ID=gene2091;Name=YPTS_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10490;old_locus_tag=YPTS_2068 NC_010634.1 Protein Homology CDS 2283998 2285695 . - 0 ID=cds2019;Parent=gene2091;Dbxref=Genbank:WP_002224472.1;Name=WP_002224472.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_002224472.1;transl_table=11 NC_010634.1 RefSeq gene 2285934 2286230 . - . ID=gene2092;Name=YPTS_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10495 NC_010634.1 Protein Homology CDS 2285934 2286230 . - 0 ID=cds2020;Parent=gene2092;Dbxref=Genbank:WP_032467049.1;Name=WP_032467049.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467049.1;transl_table=11 NC_010634.1 RefSeq gene 2286542 2286631 . - . ID=gene2093;Name=YPTS_RS10500;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS10500;old_locus_tag=YPTS_R0069 NC_010634.1 tRNAscan-SE tRNA 2286542 2286631 . - . ID=rna65;Parent=gene2093;anticodon=(pos:complement(2286595..2286597));gbkey=tRNA;product=tRNA-Ser NC_010634.1 tRNAscan-SE exon 2286542 2286631 . - . ID=id154;Parent=rna65;anticodon=(pos:complement(2286595..2286597));gbkey=tRNA;product=tRNA-Ser NC_010634.1 RefSeq gene 2286773 2287648 . - . ID=gene2094;Name=YPTS_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10505;old_locus_tag=YPTS_2070 NC_010634.1 Protein Homology CDS 2286773 2287648 . - 0 ID=cds2021;Parent=gene2094;Dbxref=Genbank:WP_002211229.1;Name=WP_002211229.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211229.1;transl_table=11 NC_010634.1 RefSeq gene 2287949 2289031 . - . ID=gene2095;Name=YPTS_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10510;old_locus_tag=YPTS_2071 NC_010634.1 Protein Homology CDS 2287949 2289031 . - 0 ID=cds2022;Parent=gene2095;Dbxref=Genbank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211228.1;transl_table=11 NC_010634.1 RefSeq gene 2289051 2289887 . - . ID=gene2096;Name=YPTS_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10515;old_locus_tag=YPTS_2072 NC_010634.1 Protein Homology CDS 2289051 2289887 . - 0 ID=cds2023;Parent=gene2096;Dbxref=Genbank:WP_012413712.1;Name=WP_012413712.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_012413712.1;transl_table=11 NC_010634.1 RefSeq gene 2289884 2290750 . - . ID=gene2097;Name=YPTS_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10520;old_locus_tag=YPTS_2073 NC_010634.1 Protein Homology CDS 2289884 2290750 . - 0 ID=cds2024;Parent=gene2097;Dbxref=Genbank:WP_002211226.1;Name=WP_002211226.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211226.1;transl_table=11 NC_010634.1 RefSeq gene 2290747 2291814 . - . ID=gene2098;Name=YPTS_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10525;old_locus_tag=YPTS_2074 NC_010634.1 Protein Homology CDS 2290747 2291814 . - 0 ID=cds2025;Parent=gene2098;Dbxref=Genbank:WP_012105138.1;Name=WP_012105138.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_012105138.1;transl_table=11 NC_010634.1 RefSeq gene 2292028 2292858 . + . ID=gene2099;Name=YPTS_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10530;old_locus_tag=YPTS_2075 NC_010634.1 Protein Homology CDS 2292028 2292858 . + 0 ID=cds2026;Parent=gene2099;Dbxref=Genbank:WP_002211223.1;Name=WP_002211223.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11 NC_010634.1 RefSeq gene 2292872 2293984 . + . ID=gene2100;Name=YPTS_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10535;old_locus_tag=YPTS_2076 NC_010634.1 Protein Homology CDS 2292872 2293984 . + 0 ID=cds2027;Parent=gene2100;Dbxref=Genbank:WP_002211222.1;Name=WP_002211222.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NC_010634.1 RefSeq gene 2294241 2294330 . - . ID=gene2101;Name=YPTS_RS10540;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS10540;old_locus_tag=YPTS_R0068 NC_010634.1 tRNAscan-SE tRNA 2294241 2294330 . - . ID=rna66;Parent=gene2101;anticodon=(pos:complement(2294294..2294296));gbkey=tRNA;product=tRNA-Ser NC_010634.1 tRNAscan-SE exon 2294241 2294330 . - . ID=id155;Parent=rna66;anticodon=(pos:complement(2294294..2294296));gbkey=tRNA;product=tRNA-Ser NC_010634.1 RefSeq gene 2294619 2295356 . + . ID=gene2102;Name=YPTS_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10545;old_locus_tag=YPTS_2077 NC_010634.1 Protein Homology CDS 2294619 2295356 . + 0 ID=cds2028;Parent=gene2102;Dbxref=Genbank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NC_010634.1 RefSeq gene 2295393 2295953 . + . ID=gene2103;Name=YPTS_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10550;old_locus_tag=YPTS_2078 NC_010634.1 Protein Homology CDS 2295393 2295953 . + 0 ID=cds2029;Parent=gene2103;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2296007 2296333 . + . ID=id156;gbkey=repeat_region NC_010634.1 RefSeq gene 2296407 2296970 . - . ID=gene2104;Name=YPTS_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10555;old_locus_tag=YPTS_2079 NC_010634.1 Protein Homology CDS 2296407 2296970 . - 0 ID=cds2030;Parent=gene2104;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NC_010634.1 RefSeq gene 2297423 2298628 . - . ID=gene2105;Name=YPTS_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10560;old_locus_tag=YPTS_2080 NC_010634.1 Protein Homology CDS 2297423 2298628 . - 0 ID=cds2031;Parent=gene2105;Dbxref=Genbank:WP_002211217.1;Name=WP_002211217.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_002211217.1;transl_table=11 NC_010634.1 RefSeq gene 2298922 2299506 . + . ID=gene2106;Name=YPTS_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10565;old_locus_tag=YPTS_2081 NC_010634.1 Protein Homology CDS 2298922 2299506 . + 0 ID=cds2032;Parent=gene2106;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NC_010634.1 RefSeq gene 2299514 2300215 . + . ID=gene2107;Name=YPTS_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10570;old_locus_tag=YPTS_2082 NC_010634.1 Protein Homology CDS 2299514 2300215 . + 0 ID=cds2033;Parent=gene2107;Dbxref=Genbank:WP_012413713.1;Name=WP_012413713.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413713.1;transl_table=11 NC_010634.1 RefSeq gene 2300208 2301137 . + . ID=gene2108;Name=YPTS_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10575;old_locus_tag=YPTS_2083 NC_010634.1 Protein Homology CDS 2300208 2301137 . + 0 ID=cds2034;Parent=gene2108;Dbxref=Genbank:WP_016582697.1;Name=WP_016582697.1;gbkey=CDS;product=virulence factor MviM;protein_id=WP_016582697.1;transl_table=11 NC_010634.1 RefSeq gene 2301404 2302939 . + . ID=gene2109;Name=YPTS_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10580;old_locus_tag=YPTS_2084 NC_010634.1 Protein Homology CDS 2301404 2302939 . + 0 ID=cds2035;Parent=gene2109;Dbxref=Genbank:WP_012413714.1;Name=WP_012413714.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413714.1;transl_table=11 NC_010634.1 RefSeq gene 2303373 2305034 . + . ID=gene2110;Name=YPTS_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10585;old_locus_tag=YPTS_2085 NC_010634.1 Protein Homology CDS 2303373 2305034 . + 0 ID=cds2036;Parent=gene2110;Dbxref=Genbank:WP_012413715.1;Name=WP_012413715.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_012413715.1;transl_table=11 NC_010634.1 RefSeq gene 2305064 2309959 . + . ID=gene2111;Name=YPTS_RS10590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS10590;pseudo=true NC_010634.1 Protein Homology CDS 2305064 2309959 . + 0 ID=cds2037;Parent=gene2111;gbkey=CDS;product=hemolysin;pseudo=true;transl_except=(pos:2308445..2308447%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 2310026 2311756 . - . ID=gene2112;Name=YPTS_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10595;old_locus_tag=YPTS_2088 NC_010634.1 Protein Homology CDS 2310026 2311756 . - 0 ID=cds2038;Parent=gene2112;Dbxref=Genbank:WP_012413716.1;Name=WP_012413716.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_012413716.1;transl_table=11 NC_010634.1 RefSeq gene 2312309 2312884 . + . ID=gene2113;Name=YPTS_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10600;old_locus_tag=YPTS_2089 NC_010634.1 Protein Homology CDS 2312309 2312884 . + 0 ID=cds2039;Parent=gene2113;Dbxref=Genbank:WP_011192409.1;Name=WP_011192409.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192409.1;transl_table=11 NC_010634.1 RefSeq gene 2313116 2313880 . + . ID=gene2114;Name=YPTS_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10605;old_locus_tag=YPTS_2090 NC_010634.1 Protein Homology CDS 2313116 2313880 . + 0 ID=cds2040;Parent=gene2114;Dbxref=Genbank:WP_011192410.1;Name=WP_011192410.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_011192410.1;transl_table=11 NC_010634.1 RefSeq gene 2314073 2315044 . - . ID=gene2115;Name=YPTS_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10610;old_locus_tag=YPTS_2091 NC_010634.1 Protein Homology CDS 2314073 2315044 . - 0 ID=cds2041;Parent=gene2115;Dbxref=Genbank:WP_011192411.1;Name=WP_011192411.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_011192411.1;transl_table=11 NC_010634.1 RefSeq gene 2315041 2315844 . - . ID=gene2116;Name=YPTS_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10615;old_locus_tag=YPTS_2092 NC_010634.1 Protein Homology CDS 2315041 2315844 . - 0 ID=cds2042;Parent=gene2116;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11 NC_010634.1 RefSeq gene 2316035 2316430 . - . ID=gene2117;Name=YPTS_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10620;old_locus_tag=YPTS_2093 NC_010634.1 Protein Homology CDS 2316035 2316430 . - 0 ID=cds2043;Parent=gene2117;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11 NC_010634.1 RefSeq gene 2316610 2317425 . - . ID=gene2118;Name=YPTS_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10625;old_locus_tag=YPTS_2094 NC_010634.1 Protein Homology CDS 2316610 2317425 . - 0 ID=cds2044;Parent=gene2118;Dbxref=Genbank:WP_011192412.1;Name=WP_011192412.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192412.1;transl_table=11 NC_010634.1 RefSeq gene 2318287 2320083 . + . ID=gene2119;Name=YPTS_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10630;old_locus_tag=YPTS_2095 NC_010634.1 Protein Homology CDS 2318287 2320083 . + 0 ID=cds2045;Parent=gene2119;Dbxref=Genbank:WP_002211204.1;Name=WP_002211204.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NC_010634.1 RefSeq gene 2320083 2320526 . + . ID=gene2120;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YPTS_RS10635;old_locus_tag=YPTS_2096 NC_010634.1 Protein Homology CDS 2320083 2320526 . + 0 ID=cds2046;Parent=gene2120;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11 NC_010634.1 RefSeq gene 2320584 2321327 . + . ID=gene2121;Name=YPTS_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10640;old_locus_tag=YPTS_2097 NC_010634.1 Protein Homology CDS 2320584 2321327 . + 0 ID=cds2047;Parent=gene2121;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NC_010634.1 RefSeq gene 2321536 2322057 . + . ID=gene2122;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YPTS_RS10645;old_locus_tag=YPTS_2098 NC_010634.1 Protein Homology CDS 2321536 2322057 . + 0 ID=cds2048;Parent=gene2122;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NC_010634.1 RefSeq gene 2322364 2322978 . + . ID=gene2123;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YPTS_RS10650;old_locus_tag=YPTS_2099 NC_010634.1 Protein Homology CDS 2322364 2322978 . + 0 ID=cds2049;Parent=gene2123;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11 NC_010634.1 RefSeq gene 2323140 2324144 . + . ID=gene2124;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YPTS_RS10655;old_locus_tag=YPTS_2100 NC_010634.1 Protein Homology CDS 2323140 2324144 . + 0 ID=cds2050;Parent=gene2124;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NC_010634.1 RefSeq gene 2324199 2324984 . - . ID=gene2125;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=YPTS_RS10660;old_locus_tag=YPTS_2101 NC_010634.1 Protein Homology CDS 2324199 2324984 . - 0 ID=cds2051;Parent=gene2125;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11 NC_010634.1 RefSeq gene 2324981 2325739 . - . ID=gene2126;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=YPTS_RS10665;old_locus_tag=YPTS_2102 NC_010634.1 Protein Homology CDS 2324981 2325739 . - 0 ID=cds2052;Parent=gene2126;Dbxref=Genbank:WP_011192413.1;Name=WP_011192413.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_011192413.1;transl_table=11 NC_010634.1 RefSeq gene 2325815 2326771 . + . ID=gene2127;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=YPTS_RS10670;old_locus_tag=YPTS_2103 NC_010634.1 Protein Homology CDS 2325815 2326771 . + 0 ID=cds2053;Parent=gene2127;Dbxref=Genbank:WP_011192414.1;Name=WP_011192414.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc ABC transporter substrate-binding protein;protein_id=WP_011192414.1;transl_table=11 NC_010634.1 RefSeq gene 2326792 2328108 . + . ID=gene2128;Name=YPTS_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10675;old_locus_tag=YPTS_2104 NC_010634.1 Protein Homology CDS 2326792 2328108 . + 0 ID=cds2054;Parent=gene2128;Dbxref=Genbank:WP_002228437.1;Name=WP_002228437.1;gbkey=CDS;product=peptidase;protein_id=WP_002228437.1;transl_table=11 NC_010634.1 RefSeq gene 2328375 2329337 . + . ID=gene2129;Name=YPTS_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10680;old_locus_tag=YPTS_2105 NC_010634.1 Protein Homology CDS 2328375 2329337 . + 0 ID=cds2055;Parent=gene2129;Dbxref=Genbank:WP_012413718.1;Name=WP_012413718.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_012413718.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2329456 2329628 . + . ID=id157;gbkey=repeat_region NC_010634.1 RefSeq gene 2329677 2331119 . - . ID=gene2130;Name=YPTS_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10685;old_locus_tag=YPTS_2107 NC_010634.1 Protein Homology CDS 2329677 2331119 . - 0 ID=cds2056;Parent=gene2130;Dbxref=Genbank:WP_002211193.1;Name=WP_002211193.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NC_010634.1 RefSeq gene 2331481 2332350 . - . ID=gene2131;Name=YPTS_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10690;old_locus_tag=YPTS_2108 NC_010634.1 Protein Homology CDS 2331481 2332350 . - 0 ID=cds2057;Parent=gene2131;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NC_010634.1 RefSeq gene 2332703 2334187 . + . ID=gene2132;Name=YPTS_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10695;old_locus_tag=YPTS_2109 NC_010634.1 Protein Homology CDS 2332703 2334187 . + 0 ID=cds2058;Parent=gene2132;Dbxref=Genbank:WP_011906215.1;Name=WP_011906215.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_011906215.1;transl_table=11 NC_010634.1 RefSeq gene 2334231 2334422 . + . ID=gene2133;Name=YPTS_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10700;old_locus_tag=YPTS_2110 NC_010634.1 Protein Homology CDS 2334231 2334422 . + 0 ID=cds2059;Parent=gene2133;Dbxref=Genbank:WP_002216963.1;Name=WP_002216963.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216963.1;transl_table=11 NC_010634.1 RefSeq gene 2334429 2335070 . + . ID=gene2134;Name=YPTS_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10705;old_locus_tag=YPTS_2111 NC_010634.1 Protein Homology CDS 2334429 2335070 . + 0 ID=cds2060;Parent=gene2134;Dbxref=Genbank:WP_011192416.1;Name=WP_011192416.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_011192416.1;transl_table=11 NC_010634.1 RefSeq gene 2335785 2336228 . + . ID=gene2135;Name=YPTS_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10710;old_locus_tag=YPTS_2112 NC_010634.1 Protein Homology CDS 2335785 2336228 . + 0 ID=cds2061;Parent=gene2135;Dbxref=Genbank:WP_012413719.1;Name=WP_012413719.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_012413719.1;transl_table=11 NC_010634.1 RefSeq gene 2336215 2336544 . + . ID=gene2136;Name=YPTS_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10715;old_locus_tag=YPTS_2113 NC_010634.1 Protein Homology CDS 2336215 2336544 . + 0 ID=cds2062;Parent=gene2136;Dbxref=Genbank:WP_011192418.1;Name=WP_011192418.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_011192418.1;transl_table=11 NC_010634.1 RefSeq gene 2336710 2337054 . - . ID=gene2137;Name=YPTS_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10720;old_locus_tag=YPTS_2114 NC_010634.1 Protein Homology CDS 2336710 2337054 . - 0 ID=cds2063;Parent=gene2137;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11 NC_010634.1 RefSeq gene 2337185 2339089 . + . ID=gene2138;Name=YPTS_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10725;old_locus_tag=YPTS_2115 NC_010634.1 Protein Homology CDS 2337185 2339089 . + 0 ID=cds2064;Parent=gene2138;Dbxref=Genbank:WP_011192419.1;Name=WP_011192419.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_011192419.1;transl_table=11 NC_010634.1 RefSeq gene 2339161 2339859 . + . ID=gene2139;Name=YPTS_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10730;old_locus_tag=YPTS_2116 NC_010634.1 Protein Homology CDS 2339161 2339859 . + 0 ID=cds2065;Parent=gene2139;Dbxref=Genbank:WP_011192420.1;Name=WP_011192420.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_011192420.1;transl_table=11 NC_010634.1 RefSeq gene 2339996 2340601 . + . ID=gene2140;Name=YPTS_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10735;old_locus_tag=YPTS_2117 NC_010634.1 Protein Homology CDS 2339996 2340601 . + 0 ID=cds2066;Parent=gene2140;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2340637 2340803 . + . ID=id158;gbkey=repeat_region NC_010634.1 RefSeq gene 2341255 2342943 . + . ID=gene2141;Name=YPTS_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10740;old_locus_tag=YPTS_2118 NC_010634.1 Protein Homology CDS 2341255 2342943 . + 0 ID=cds2067;Parent=gene2141;Dbxref=Genbank:WP_002220632.1;Name=WP_002220632.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002220632.1;transl_table=11 NC_010634.1 RefSeq gene 2343103 2344224 . + . ID=gene2142;Name=YPTS_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10745;old_locus_tag=YPTS_2119 NC_010634.1 Protein Homology CDS 2343103 2344224 . + 0 ID=cds2068;Parent=gene2142;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NC_010634.1 RefSeq gene 2344461 2344730 . - . ID=gene2143;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YPTS_RS10750;old_locus_tag=YPTS_2120 NC_010634.1 Protein Homology CDS 2344461 2344730 . - 0 ID=cds2069;Parent=gene2143;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11 NC_010634.1 RefSeq gene 2344734 2345546 . - . ID=gene2144;Name=YPTS_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10755;old_locus_tag=YPTS_2121 NC_010634.1 Protein Homology CDS 2344734 2345546 . - 0 ID=cds2070;Parent=gene2144;Dbxref=Genbank:WP_002211179.1;Name=WP_002211179.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_002211179.1;transl_table=11 NC_010634.1 RefSeq gene 2345571 2346257 . - . ID=gene2145;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YPTS_RS10760;old_locus_tag=YPTS_2122 NC_010634.1 Protein Homology CDS 2345571 2346257 . - 0 ID=cds2071;Parent=gene2145;Dbxref=Genbank:WP_002220631.1;Name=WP_002220631.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11 NC_010634.1 RefSeq gene 2346978 2347250 . + . ID=gene2146;Name=YPTS_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10765;old_locus_tag=YPTS_2123 NC_010634.1 Protein Homology CDS 2346978 2347250 . + 0 ID=cds2072;Parent=gene2146;Dbxref=Genbank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211743.1;transl_table=11 NC_010634.1 RefSeq gene 2347391 2348476 . + . ID=gene2147;Name=YPTS_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10770;old_locus_tag=YPTS_2124 NC_010634.1 Protein Homology CDS 2347391 2348476 . + 0 ID=cds2073;Parent=gene2147;Dbxref=Genbank:WP_011192421.1;Name=WP_011192421.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192421.1;transl_table=11 NC_010634.1 RefSeq gene 2348547 2349203 . + . ID=gene2148;Name=YPTS_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10775;old_locus_tag=YPTS_2125 NC_010634.1 Protein Homology CDS 2348547 2349203 . + 0 ID=cds2074;Parent=gene2148;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11 NC_010634.1 RefSeq gene 2349306 2349752 . + . ID=gene2149;Name=YPTS_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10780;old_locus_tag=YPTS_2126 NC_010634.1 Protein Homology CDS 2349306 2349752 . + 0 ID=cds2075;Parent=gene2149;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11 NC_010634.1 RefSeq gene 2349853 2351025 . - . ID=gene2150;Name=YPTS_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10785;old_locus_tag=YPTS_2127 NC_010634.1 Protein Homology CDS 2349853 2351025 . - 0 ID=cds2076;Parent=gene2150;Dbxref=Genbank:WP_011192422.1;Name=WP_011192422.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011192422.1;transl_table=11 NC_010634.1 RefSeq gene 2351029 2352228 . - . ID=gene2151;Name=YPTS_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10790;old_locus_tag=YPTS_2128 NC_010634.1 Protein Homology CDS 2351029 2352228 . - 0 ID=cds2077;Parent=gene2151;Dbxref=Genbank:WP_011192423.1;Name=WP_011192423.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_011192423.1;transl_table=11 NC_010634.1 RefSeq gene 2352245 2352985 . - . ID=gene2152;Name=YPTS_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10795;old_locus_tag=YPTS_2129 NC_010634.1 Protein Homology CDS 2352245 2352985 . - 0 ID=cds2078;Parent=gene2152;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NC_010634.1 RefSeq gene 2354077 2354433 . + . ID=gene2153;Name=YPTS_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10800;old_locus_tag=YPTS_2130 NC_010634.1 Protein Homology CDS 2354077 2354433 . + 0 ID=cds2079;Parent=gene2153;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NC_010634.1 RefSeq gene 2354850 2355380 . - . ID=gene2154;Name=YPTS_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10805;old_locus_tag=YPTS_2132 NC_010634.1 Protein Homology CDS 2354850 2355380 . - 0 ID=cds2080;Parent=gene2154;Dbxref=Genbank:WP_002227934.1;Name=WP_002227934.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_002227934.1;transl_table=11 NC_010634.1 RefSeq gene 2355616 2357190 . - . ID=gene2155;Name=YPTS_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10810;old_locus_tag=YPTS_2133 NC_010634.1 Protein Homology CDS 2355616 2357190 . - 0 ID=cds2081;Parent=gene2155;Dbxref=Genbank:WP_011192424.1;Name=WP_011192424.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_011192424.1;transl_table=11 NC_010634.1 RefSeq gene 2357434 2358153 . + . ID=gene2156;Name=YPTS_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10815;old_locus_tag=YPTS_2134 NC_010634.1 Protein Homology CDS 2357434 2358153 . + 0 ID=cds2082;Parent=gene2156;Dbxref=Genbank:WP_002211688.1;Name=WP_002211688.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_002211688.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2358193 2358319 . + . ID=id159;gbkey=repeat_region NC_010634.1 RefSeq gene 2358371 2359906 . - . ID=gene2157;Name=YPTS_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10820;old_locus_tag=YPTS_2135 NC_010634.1 Protein Homology CDS 2358371 2359906 . - 0 ID=cds2083;Parent=gene2157;Dbxref=Genbank:WP_011192425.1;Name=WP_011192425.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_011192425.1;transl_table=11 NC_010634.1 RefSeq gene 2360370 2361674 . + . ID=gene2158;Name=YPTS_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10825;old_locus_tag=YPTS_2136 NC_010634.1 Protein Homology CDS 2360370 2361674 . + 0 ID=cds2084;Parent=gene2158;Dbxref=Genbank:WP_002211686.1;Name=WP_002211686.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NC_010634.1 RefSeq gene 2361703 2362896 . - . ID=gene2159;Name=YPTS_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10830;old_locus_tag=YPTS_2137 NC_010634.1 Protein Homology CDS 2361703 2362896 . - 0 ID=cds2085;Parent=gene2159;Dbxref=Genbank:WP_011192426.1;Name=WP_011192426.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_011192426.1;transl_table=11 NC_010634.1 RefSeq gene 2363161 2364030 . - . ID=gene2160;Name=YPTS_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10835;old_locus_tag=YPTS_2138 NC_010634.1 Protein Homology CDS 2363161 2364030 . - 0 ID=cds2086;Parent=gene2160;Dbxref=Genbank:WP_011192427.1;Name=WP_011192427.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_011192427.1;transl_table=11 NC_010634.1 RefSeq gene 2364228 2365133 . + . ID=gene2161;Name=YPTS_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10840;old_locus_tag=YPTS_2139 NC_010634.1 Protein Homology CDS 2364228 2365133 . + 0 ID=cds2087;Parent=gene2161;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NC_010634.1 RefSeq gene 2365168 2366286 . - . ID=gene2162;Name=YPTS_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10845;old_locus_tag=YPTS_2140 NC_010634.1 Protein Homology CDS 2365168 2366286 . - 0 ID=cds2088;Parent=gene2162;Dbxref=Genbank:WP_011192428.1;Name=WP_011192428.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192428.1;transl_table=11 NC_010634.1 RefSeq gene 2366394 2367668 . - . ID=gene2163;Name=YPTS_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10850;old_locus_tag=YPTS_2141 NC_010634.1 Protein Homology CDS 2366394 2367668 . - 0 ID=cds2089;Parent=gene2163;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11 NC_010634.1 RefSeq gene 2367818 2369752 . - . ID=gene2164;Name=YPTS_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10855;old_locus_tag=YPTS_2143 NC_010634.1 Protein Homology CDS 2367818 2369752 . - 0 ID=cds2090;Parent=gene2164;Dbxref=Genbank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_002211681.1;transl_table=11 NC_010634.1 RefSeq gene 2370175 2370945 . + . ID=gene2165;Name=YPTS_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10860;old_locus_tag=YPTS_2144 NC_010634.1 Protein Homology CDS 2370175 2370945 . + 0 ID=cds2091;Parent=gene2165;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11 NC_010634.1 RefSeq gene 2371018 2371893 . - . ID=gene2166;Name=YPTS_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10865;old_locus_tag=YPTS_2145 NC_010634.1 Protein Homology CDS 2371018 2371893 . - 0 ID=cds2092;Parent=gene2166;Dbxref=Genbank:WP_002211679.1;Name=WP_002211679.1;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;protein_id=WP_002211679.1;transl_table=11 NC_010634.1 RefSeq gene 2372217 2373212 . - . ID=gene2167;Name=YPTS_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10870;old_locus_tag=YPTS_2146 NC_010634.1 Protein Homology CDS 2372217 2373212 . - 0 ID=cds2093;Parent=gene2167;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NC_010634.1 RefSeq gene 2373560 2373973 . + . ID=gene2168;Name=YPTS_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10875;old_locus_tag=YPTS_2147 NC_010634.1 Protein Homology CDS 2373560 2373973 . + 0 ID=cds2094;Parent=gene2168;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NC_010634.1 RefSeq gene 2374044 2374316 . + . ID=gene2169;Name=YPTS_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10880 NC_010634.1 Protein Homology CDS 2374044 2374316 . + 0 ID=cds2095;Parent=gene2169;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11 NC_010634.1 RefSeq gene 2374450 2375097 . - . ID=gene2170;Name=YPTS_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10885;old_locus_tag=YPTS_2149 NC_010634.1 Protein Homology CDS 2374450 2375097 . - 0 ID=cds2096;Parent=gene2170;Dbxref=Genbank:WP_011192429.1;Name=WP_011192429.1;gbkey=CDS;product=nicotinamidase/pyrazinamidase;protein_id=WP_011192429.1;transl_table=11 NC_010634.1 RefSeq gene 2375112 2376128 . - . ID=gene2171;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YPTS_RS10890;old_locus_tag=YPTS_2150 NC_010634.1 Protein Homology CDS 2375112 2376128 . - 0 ID=cds2097;Parent=gene2171;Dbxref=Genbank:WP_011192430.1;Name=WP_011192430.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_011192430.1;transl_table=11 NC_010634.1 RefSeq gene 2376245 2378095 . - . ID=gene2172;Name=YPTS_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10895;old_locus_tag=YPTS_2151 NC_010634.1 Protein Homology CDS 2376245 2378095 . - 0 ID=cds2098;Parent=gene2172;Dbxref=Genbank:WP_011192431.1;Name=WP_011192431.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_011192431.1;transl_table=11 NC_010634.1 RefSeq gene 2378258 2378809 . + . ID=gene2173;Name=YPTS_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10900;old_locus_tag=YPTS_2152 NC_010634.1 Protein Homology CDS 2378258 2378809 . + 0 ID=cds2099;Parent=gene2173;Dbxref=Genbank:WP_002211673.1;Name=WP_002211673.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211673.1;transl_table=11 NC_010634.1 RefSeq gene 2379034 2380080 . + . ID=gene2174;Name=YPTS_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10905;old_locus_tag=YPTS_2153 NC_010634.1 Protein Homology CDS 2379034 2380080 . + 0 ID=cds2100;Parent=gene2174;Dbxref=Genbank:WP_011192432.1;Name=WP_011192432.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_011192432.1;transl_table=11 NC_010634.1 RefSeq gene 2380187 2382112 . + . ID=gene2175;Name=YPTS_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10910;old_locus_tag=YPTS_2155 NC_010634.1 Protein Homology CDS 2380187 2382112 . + 0 ID=cds2101;Parent=gene2175;Dbxref=Genbank:WP_012105118.1;Name=WP_012105118.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_012105118.1;transl_table=11 NC_010634.1 RefSeq gene 2382109 2382399 . + . ID=gene2176;Name=YPTS_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10915;old_locus_tag=YPTS_2156 NC_010634.1 Protein Homology CDS 2382109 2382399 . + 0 ID=cds2102;Parent=gene2176;Dbxref=Genbank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211669.1;transl_table=11 NC_010634.1 RefSeq gene 2382412 2382798 . - . ID=gene2177;Name=YPTS_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10920;old_locus_tag=YPTS_2157 NC_010634.1 Protein Homology CDS 2382412 2382798 . - 0 ID=cds2103;Parent=gene2177;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11 NC_010634.1 RefSeq gene 2382876 2383682 . - . ID=gene2178;Name=YPTS_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10925;old_locus_tag=YPTS_2158 NC_010634.1 Protein Homology CDS 2382876 2383682 . - 0 ID=cds2104;Parent=gene2178;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11 NC_010634.1 RefSeq gene 2384492 2385352 . + . ID=gene2179;Name=YPTS_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10930;old_locus_tag=YPTS_2160 NC_010634.1 Protein Homology CDS 2384492 2385352 . + 0 ID=cds2105;Parent=gene2179;Dbxref=Genbank:WP_002211665.1;Name=WP_002211665.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211665.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2385414 2385532 . + . ID=id160;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 2385586 2385704 . + . ID=id161;gbkey=repeat_region NC_010634.1 RefSeq gene 2385686 2385770 . - . ID=gene2180;Name=YPTS_RS10935;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS10935;old_locus_tag=YPTS_R0067 NC_010634.1 tRNAscan-SE tRNA 2385686 2385770 . - . ID=rna67;Parent=gene2180;anticodon=(pos:complement(2385734..2385736));gbkey=tRNA;product=tRNA-Tyr NC_010634.1 tRNAscan-SE exon 2385686 2385770 . - . ID=id162;Parent=rna67;anticodon=(pos:complement(2385734..2385736));gbkey=tRNA;product=tRNA-Tyr NC_010634.1 RefSeq gene 2385836 2385920 . - . ID=gene2181;Name=YPTS_RS10940;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS10940;old_locus_tag=YPTS_R0066 NC_010634.1 tRNAscan-SE tRNA 2385836 2385920 . - . ID=rna68;Parent=gene2181;anticodon=(pos:complement(2385884..2385886));gbkey=tRNA;product=tRNA-Tyr NC_010634.1 tRNAscan-SE exon 2385836 2385920 . - . ID=id163;Parent=rna68;anticodon=(pos:complement(2385884..2385886));gbkey=tRNA;product=tRNA-Tyr NC_010634.1 RefSeq gene 2386069 2386917 . - . ID=gene2182;Name=YPTS_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10945;old_locus_tag=YPTS_2163 NC_010634.1 Protein Homology CDS 2386069 2386917 . - 0 ID=cds2106;Parent=gene2182;Dbxref=Genbank:WP_002230891.1;Name=WP_002230891.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_002230891.1;transl_table=11 NC_010634.1 RefSeq gene 2387001 2387465 . - . ID=gene2183;Name=YPTS_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10950;old_locus_tag=YPTS_2164 NC_010634.1 Protein Homology CDS 2387001 2387465 . - 0 ID=cds2107;Parent=gene2183;Dbxref=Genbank:WP_002210666.1;Name=WP_002210666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210666.1;transl_table=11 NC_010634.1 RefSeq gene 2388799 2389815 . + . ID=gene2184;Name=YPTS_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10955;old_locus_tag=YPTS_2165 NC_010634.1 Protein Homology CDS 2388799 2389815 . + 0 ID=cds2108;Parent=gene2184;Dbxref=Genbank:WP_011192435.1;Name=WP_011192435.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192435.1;transl_table=11 NC_010634.1 RefSeq gene 2390122 2391468 . + . ID=gene2185;Name=YPTS_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10960;old_locus_tag=YPTS_2166 NC_010634.1 Protein Homology CDS 2390122 2391468 . + 0 ID=cds2109;Parent=gene2185;Dbxref=Genbank:WP_002210664.1;Name=WP_002210664.1;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_002210664.1;transl_table=11 NC_010634.1 RefSeq gene 2391903 2392310 . - . ID=gene2186;Name=YPTS_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10965;old_locus_tag=YPTS_2169 NC_010634.1 Protein Homology CDS 2391903 2392310 . - 0 ID=cds2110;Parent=gene2186;Dbxref=Genbank:WP_002223593.1;Name=WP_002223593.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002223593.1;transl_table=11 NC_010634.1 RefSeq gene 2393060 2393650 . + . ID=gene2187;Name=YPTS_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10970;old_locus_tag=YPTS_2170 NC_010634.1 Protein Homology CDS 2393060 2393650 . + 0 ID=cds2111;Parent=gene2187;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NC_010634.1 RefSeq gene 2394401 2397076 . - . ID=gene2188;Name=YPTS_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10975;old_locus_tag=YPTS_2171 NC_010634.1 Protein Homology CDS 2394401 2397076 . - 0 ID=cds2112;Parent=gene2188;Dbxref=Genbank:WP_002210657.1;Name=WP_002210657.1;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_002210657.1;transl_table=11 NC_010634.1 RefSeq gene 2398135 2398779 . + . ID=gene2189;Name=YPTS_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10980;old_locus_tag=YPTS_2172 NC_010634.1 Protein Homology CDS 2398135 2398779 . + 0 ID=cds2113;Parent=gene2189;Dbxref=Genbank:WP_011192436.1;Name=WP_011192436.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192436.1;transl_table=11 NC_010634.1 RefSeq gene 2399617 2401254 . + . ID=gene2190;Name=YPTS_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10985;old_locus_tag=YPTS_2173 NC_010634.1 Protein Homology CDS 2399617 2401254 . + 0 ID=cds2114;Parent=gene2190;Dbxref=Genbank:WP_002218177.1;Name=WP_002218177.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002218177.1;transl_table=11 NC_010634.1 RefSeq gene 2401341 2402261 . + . ID=gene2191;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YPTS_RS10990;old_locus_tag=YPTS_2174 NC_010634.1 Protein Homology CDS 2401341 2402261 . + 0 ID=cds2115;Parent=gene2191;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11 NC_010634.1 RefSeq gene 2402277 2403185 . + . ID=gene2192;Name=YPTS_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS10995;old_locus_tag=YPTS_2175 NC_010634.1 Protein Homology CDS 2402277 2403185 . + 0 ID=cds2116;Parent=gene2192;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11 NC_010634.1 RefSeq gene 2403197 2404198 . + . ID=gene2193;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YPTS_RS11000;old_locus_tag=YPTS_2176 NC_010634.1 Protein Homology CDS 2403197 2404198 . + 0 ID=cds2117;Parent=gene2193;Dbxref=Genbank:WP_002210652.1;Name=WP_002210652.1;gbkey=CDS;gene=oppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210652.1;transl_table=11 NC_010634.1 RefSeq gene 2404195 2405196 . + . ID=gene2194;Name=YPTS_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11005;old_locus_tag=YPTS_2177 NC_010634.1 Protein Homology CDS 2404195 2405196 . + 0 ID=cds2118;Parent=gene2194;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11 NC_010634.1 RefSeq gene 2405767 2405982 . + . ID=gene2195;Name=YPTS_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11010;old_locus_tag=YPTS_2178 NC_010634.1 Protein Homology CDS 2405767 2405982 . + 0 ID=cds2119;Parent=gene2195;Dbxref=Genbank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NC_010634.1 RefSeq gene 2406280 2406603 . - . ID=gene2196;Name=YPTS_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11015;old_locus_tag=YPTS_2179 NC_010634.1 Protein Homology CDS 2406280 2406603 . - 0 ID=cds2120;Parent=gene2196;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NC_010634.1 RefSeq gene 2406768 2408228 . - . ID=gene2197;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YPTS_RS11020;old_locus_tag=YPTS_2180 NC_010634.1 Protein Homology CDS 2406768 2408228 . - 0 ID=cds2121;Parent=gene2197;Dbxref=Genbank:WP_011192437.1;Name=WP_011192437.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_011192437.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2408363 2408537 . + . ID=id164;gbkey=repeat_region NC_010634.1 RefSeq gene 2409295 2409834 . + . ID=gene2198;Name=YPTS_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11025;old_locus_tag=YPTS_2182 NC_010634.1 Protein Homology CDS 2409295 2409834 . + 0 ID=cds2122;Parent=gene2198;Dbxref=Genbank:WP_002210646.1;Name=WP_002210646.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002210646.1;transl_table=11 NC_010634.1 RefSeq gene 2410054 2410317 . + . ID=gene2199;Name=YPTS_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11030;old_locus_tag=YPTS_2184 NC_010634.1 Protein Homology CDS 2410054 2410317 . + 0 ID=cds2123;Parent=gene2199;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NC_010634.1 RefSeq gene 2410915 2411211 . - . ID=gene2200;Name=YPTS_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11035;old_locus_tag=YPTS_2186 NC_010634.1 Protein Homology CDS 2410915 2411211 . - 0 ID=cds2124;Parent=gene2200;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11 NC_010634.1 RefSeq gene 2411512 2412258 . + . ID=gene2201;Name=YPTS_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11040;old_locus_tag=YPTS_2188 NC_010634.1 Protein Homology CDS 2411512 2412258 . + 0 ID=cds2125;Parent=gene2201;Dbxref=Genbank:WP_011192439.1;Name=WP_011192439.1;gbkey=CDS;product=transporter TonB;protein_id=WP_011192439.1;transl_table=11 NC_010634.1 RefSeq gene 2412327 2412776 . - . ID=gene2202;Name=YPTS_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11045;old_locus_tag=YPTS_2189 NC_010634.1 Protein Homology CDS 2412327 2412776 . - 0 ID=cds2126;Parent=gene2202;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11 NC_010634.1 RefSeq gene 2412856 2413398 . - . ID=gene2203;Name=YPTS_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11050;old_locus_tag=YPTS_2190 NC_010634.1 Protein Homology CDS 2412856 2413398 . - 0 ID=cds2127;Parent=gene2203;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11 NC_010634.1 RefSeq gene 2413629 2415368 . + . ID=gene2204;Name=YPTS_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11055;old_locus_tag=YPTS_2192 NC_010634.1 Protein Homology CDS 2413629 2415368 . + 0 ID=cds2128;Parent=gene2204;Dbxref=Genbank:WP_012413722.1;Name=WP_012413722.1;gbkey=CDS;product=sulfate permease;protein_id=WP_012413722.1;transl_table=11 NC_010634.1 RefSeq gene 2415489 2416259 . - . ID=gene2205;Name=YPTS_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11060;old_locus_tag=YPTS_2193 NC_010634.1 Protein Homology CDS 2415489 2416259 . - 0 ID=cds2129;Parent=gene2205;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11 NC_010634.1 RefSeq gene 2416421 2416636 . + . ID=gene2206;Name=YPTS_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11065 NC_010634.1 Protein Homology CDS 2416421 2416636 . + 0 ID=cds2130;Parent=gene2206;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NC_010634.1 RefSeq gene 2416733 2417380 . + . ID=gene2207;Name=YPTS_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11070;old_locus_tag=YPTS_2194 NC_010634.1 Protein Homology CDS 2416733 2417380 . + 0 ID=cds2131;Parent=gene2207;Dbxref=Genbank:WP_032466405.1;Name=WP_032466405.1;Note=receptor for colicin S4;gbkey=CDS;product=membrane protein;protein_id=WP_032466405.1;transl_table=11 NC_010634.1 RefSeq gene 2417527 2417841 . - . ID=gene2208;Name=YPTS_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11075;old_locus_tag=YPTS_2195 NC_010634.1 Protein Homology CDS 2417527 2417841 . - 0 ID=cds2132;Parent=gene2208;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11 NC_010634.1 RefSeq gene 2418184 2418990 . - . ID=gene2209;Name=YPTS_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11080;old_locus_tag=YPTS_2196 NC_010634.1 Protein Homology CDS 2418184 2418990 . - 0 ID=cds2133;Parent=gene2209;Dbxref=Genbank:WP_011192442.1;Name=WP_011192442.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_011192442.1;transl_table=11 NC_010634.1 RefSeq gene 2418990 2420180 . - . ID=gene2210;Name=YPTS_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11085;old_locus_tag=YPTS_2197 NC_010634.1 Protein Homology CDS 2418990 2420180 . - 0 ID=cds2134;Parent=gene2210;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NC_010634.1 RefSeq gene 2420315 2421742 . - . ID=gene2211;Name=YPTS_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11090;old_locus_tag=YPTS_2198 NC_010634.1 Protein Homology CDS 2420315 2421742 . - 0 ID=cds2135;Parent=gene2211;Dbxref=Genbank:WP_011192443.1;Name=WP_011192443.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=phosphoribosylanthranilate isomerase;protein_id=WP_011192443.1;transl_table=11 NC_010634.1 RefSeq gene 2421746 2422744 . - . ID=gene2212;Name=YPTS_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11095;old_locus_tag=YPTS_2199 NC_010634.1 Protein Homology CDS 2421746 2422744 . - 0 ID=cds2136;Parent=gene2212;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11 NC_010634.1 RefSeq gene 2422759 2423337 . - . ID=gene2213;Name=YPTS_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11100;old_locus_tag=YPTS_2200 NC_010634.1 Protein Homology CDS 2422759 2423337 . - 0 ID=cds2137;Parent=gene2213;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11 NC_010634.1 RefSeq gene 2423337 2424899 . - . ID=gene2214;Name=YPTS_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11105;old_locus_tag=YPTS_2201 NC_010634.1 Protein Homology CDS 2423337 2424899 . - 0 ID=cds2138;Parent=gene2214;Dbxref=Genbank:WP_002228454.1;Name=WP_002228454.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase subunit I;protein_id=WP_002228454.1;transl_table=11 NC_010634.1 RefSeq gene 2425018 2425080 . - . ID=gene2215;Name=YPTS_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11110 NC_010634.1 Protein Homology CDS 2425018 2425080 . - 0 ID=cds2139;Parent=gene2215;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11 NC_010634.1 RefSeq gene 2425109 2425237 . - . ID=gene2216;Name=YPTS_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11115 NC_010634.1 Protein Homology CDS 2425109 2425237 . - 0 ID=cds2140;Parent=gene2216;Dbxref=Genbank:WP_011192444.1;Name=WP_011192444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192444.1;transl_table=11 NC_010634.1 RefSeq gene 2425318 2426253 . + . ID=gene2217;Name=YPTS_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11120;old_locus_tag=YPTS_2202 NC_010634.1 Protein Homology CDS 2425318 2426253 . + 0 ID=cds2141;Parent=gene2217;Dbxref=Genbank:WP_002210629.1;Name=WP_002210629.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_002210629.1;transl_table=11 NC_010634.1 RefSeq gene 2426270 2426890 . + . ID=gene2218;Name=YPTS_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11125;old_locus_tag=YPTS_2203 NC_010634.1 Protein Homology CDS 2426270 2426890 . + 0 ID=cds2142;Parent=gene2218;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11 NC_010634.1 RefSeq gene 2427220 2428254 . + . ID=gene2219;Name=YPTS_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11130;old_locus_tag=YPTS_2204 NC_010634.1 Protein Homology CDS 2427220 2428254 . + 0 ID=cds2143;Parent=gene2219;Dbxref=Genbank:WP_011192445.1;Name=WP_011192445.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_011192445.1;transl_table=11 NC_010634.1 RefSeq gene 2428377 2428967 . - . ID=gene2220;Name=YPTS_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11135;old_locus_tag=YPTS_2205 NC_010634.1 Protein Homology CDS 2428377 2428967 . - 0 ID=cds2144;Parent=gene2220;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11 NC_010634.1 RefSeq gene 2428984 2429745 . - . ID=gene2221;Name=YPTS_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11140;old_locus_tag=YPTS_2206 NC_010634.1 Protein Homology CDS 2428984 2429745 . - 0 ID=cds2145;Parent=gene2221;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11 NC_010634.1 RefSeq gene 2429917 2430963 . + . ID=gene2222;Name=YPTS_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11145;old_locus_tag=YPTS_2207 NC_010634.1 Protein Homology CDS 2429917 2430963 . + 0 ID=cds2146;Parent=gene2222;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11 NC_010634.1 RefSeq gene 2431082 2431333 . - . ID=gene2223;Name=YPTS_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11150;old_locus_tag=YPTS_2208 NC_010634.1 Protein Homology CDS 2431082 2431333 . - 0 ID=cds2147;Parent=gene2223;Dbxref=Genbank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210623.1;transl_table=11 NC_010634.1 RefSeq gene 2431426 2431725 . + . ID=gene2224;Name=YPTS_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11155;old_locus_tag=YPTS_2209 NC_010634.1 Protein Homology CDS 2431426 2431725 . + 0 ID=cds2148;Parent=gene2224;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NC_010634.1 RefSeq gene 2431752 2434367 . + . ID=gene2225;Name=YPTS_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11160;old_locus_tag=YPTS_2210 NC_010634.1 Protein Homology CDS 2431752 2434367 . + 0 ID=cds2149;Parent=gene2225;Dbxref=Genbank:WP_011192446.1;Name=WP_011192446.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_011192446.1;transl_table=11 NC_010634.1 RefSeq gene 2434764 2435738 . + . ID=gene2226;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YPTS_RS11165;old_locus_tag=YPTS_2211 NC_010634.1 Protein Homology CDS 2434764 2435738 . + 0 ID=cds2150;Parent=gene2226;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11 NC_010634.1 RefSeq gene 2436074 2436931 . + . ID=gene2227;Name=YPTS_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11170;old_locus_tag=YPTS_2212 NC_010634.1 Protein Homology CDS 2436074 2436931 . + 0 ID=cds2151;Parent=gene2227;Dbxref=Genbank:WP_012413723.1;Name=WP_012413723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413723.1;transl_table=11 NC_010634.1 RefSeq gene 2437295 2439967 . + . ID=gene2228;Name=YPTS_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11175;old_locus_tag=YPTS_2213 NC_010634.1 Protein Homology CDS 2437295 2439967 . + 0 ID=cds2152;Parent=gene2228;Dbxref=Genbank:WP_011192448.1;Name=WP_011192448.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_011192448.1;transl_table=11 NC_010634.1 RefSeq gene 2440131 2440721 . - . ID=gene2229;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YPTS_RS11180;old_locus_tag=YPTS_2214 NC_010634.1 Protein Homology CDS 2440131 2440721 . - 0 ID=cds2153;Parent=gene2229;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11 NC_010634.1 RefSeq gene 2441227 2441988 . + . ID=gene2230;Name=YPTS_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11185;old_locus_tag=YPTS_2215 NC_010634.1 Protein Homology CDS 2441227 2441988 . + 0 ID=cds2154;Parent=gene2230;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NC_010634.1 RefSeq gene 2442169 2442480 . + . ID=gene2231;Name=YPTS_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11190;old_locus_tag=YPTS_2216 NC_010634.1 Protein Homology CDS 2442169 2442480 . + 0 ID=cds2155;Parent=gene2231;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11 NC_010634.1 RefSeq gene 2442487 2443656 . + . ID=gene2232;Name=YPTS_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11195;old_locus_tag=YPTS_2217 NC_010634.1 Protein Homology CDS 2442487 2443656 . + 0 ID=cds2156;Parent=gene2232;Dbxref=Genbank:WP_011192449.1;Name=WP_011192449.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192449.1;transl_table=11 NC_010634.1 RefSeq gene 2443778 2444077 . - . ID=gene2233;Name=YPTS_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11200;old_locus_tag=YPTS_2218 NC_010634.1 Protein Homology CDS 2443778 2444077 . - 0 ID=cds2157;Parent=gene2233;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NC_010634.1 RefSeq gene 2444547 2445284 . + . ID=gene2234;Name=YPTS_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11205;old_locus_tag=YPTS_2219 NC_010634.1 Protein Homology CDS 2444547 2445284 . + 0 ID=cds2158;Parent=gene2234;Dbxref=Genbank:WP_011192450.1;Name=WP_011192450.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_011192450.1;transl_table=11 NC_010634.1 RefSeq gene 2445284 2445610 . + . ID=gene2235;Name=YPTS_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11210;old_locus_tag=YPTS_2220 NC_010634.1 Protein Homology CDS 2445284 2445610 . + 0 ID=cds2159;Parent=gene2235;Dbxref=Genbank:WP_002210612.1;Name=WP_002210612.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_002210612.1;transl_table=11 NC_010634.1 RefSeq gene 2445866 2446081 . - . ID=gene2236;Name=YPTS_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11215;old_locus_tag=YPTS_2221 NC_010634.1 Protein Homology CDS 2445866 2446081 . - 0 ID=cds2160;Parent=gene2236;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11 NC_010634.1 RefSeq gene 2446561 2447256 . + . ID=gene2237;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPTS_RS11220;old_locus_tag=YPTS_2222 NC_010634.1 Protein Homology CDS 2446561 2447256 . + 0 ID=cds2161;Parent=gene2237;Dbxref=Genbank:WP_002210610.1;Name=WP_002210610.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NC_010634.1 RefSeq gene 2447285 2447533 . - . ID=gene2238;Name=YPTS_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11225;old_locus_tag=YPTS_2223 NC_010634.1 Protein Homology CDS 2447285 2447533 . - 0 ID=cds2162;Parent=gene2238;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11 NC_010634.1 RefSeq gene 2447867 2448532 . + . ID=gene2239;Name=YPTS_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11230;old_locus_tag=YPTS_2224 NC_010634.1 Protein Homology CDS 2447867 2448532 . + 0 ID=cds2163;Parent=gene2239;Dbxref=Genbank:WP_002215192.1;Name=WP_002215192.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11 NC_010634.1 RefSeq gene 2448649 2448954 . - . ID=gene2240;Name=YPTS_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11235;old_locus_tag=YPTS_2225 NC_010634.1 Protein Homology CDS 2448649 2448954 . - 0 ID=cds2164;Parent=gene2240;Dbxref=Genbank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210607.1;transl_table=11 NC_010634.1 RefSeq gene 2448947 2451013 . - . ID=gene2241;Name=YPTS_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11240;old_locus_tag=YPTS_2226 NC_010634.1 Protein Homology CDS 2448947 2451013 . - 0 ID=cds2165;Parent=gene2241;Dbxref=Genbank:WP_002220371.1;Name=WP_002220371.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_002220371.1;transl_table=11 NC_010634.1 RefSeq gene 2451363 2453297 . - . ID=gene2242;Name=YPTS_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11245;old_locus_tag=YPTS_2227 NC_010634.1 Protein Homology CDS 2451363 2453297 . - 0 ID=cds2166;Parent=gene2242;Dbxref=Genbank:WP_011192452.1;Name=WP_011192452.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_011192452.1;transl_table=11 NC_010634.1 RefSeq gene 2453946 2455256 . + . ID=gene2243;Name=YPTS_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11250;old_locus_tag=YPTS_2228 NC_010634.1 Protein Homology CDS 2453946 2455256 . + 0 ID=cds2167;Parent=gene2243;Dbxref=Genbank:WP_012413724.1;Name=WP_012413724.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012413724.1;transl_table=11 NC_010634.1 RefSeq gene 2455322 2456320 . + . ID=gene2244;Name=YPTS_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11255;old_locus_tag=YPTS_2229 NC_010634.1 Protein Homology CDS 2455322 2456320 . + 0 ID=cds2168;Parent=gene2244;Dbxref=Genbank:WP_011192454.1;Name=WP_011192454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192454.1;transl_table=11 NC_010634.1 RefSeq gene 2456503 2457144 . - . ID=gene2245;Name=YPTS_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11260;old_locus_tag=YPTS_2230 NC_010634.1 Protein Homology CDS 2456503 2457144 . - 0 ID=cds2169;Parent=gene2245;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NC_010634.1 RefSeq gene 2457141 2457842 . - . ID=gene2246;Name=YPTS_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11265;old_locus_tag=YPTS_2231 NC_010634.1 Protein Homology CDS 2457141 2457842 . - 0 ID=cds2170;Parent=gene2246;Dbxref=Genbank:WP_011192455.1;Name=WP_011192455.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_011192455.1;transl_table=11 NC_010634.1 RefSeq gene 2457839 2458468 . - . ID=gene2247;Name=YPTS_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11270;old_locus_tag=YPTS_2232 NC_010634.1 Protein Homology CDS 2457839 2458468 . - 0 ID=cds2171;Parent=gene2247;Dbxref=Genbank:WP_002210600.1;Name=WP_002210600.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit G;protein_id=WP_002210600.1;transl_table=11 NC_010634.1 RefSeq gene 2458478 2459572 . - . ID=gene2248;Name=YPTS_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11275;old_locus_tag=YPTS_2233 NC_010634.1 Protein Homology CDS 2458478 2459572 . - 0 ID=cds2172;Parent=gene2248;Dbxref=Genbank:WP_012413725.1;Name=WP_012413725.1;gbkey=CDS;product=electron transporter RnfG;protein_id=WP_012413725.1;transl_table=11 NC_010634.1 RefSeq gene 2460061 2460954 . + . ID=gene2249;Name=YPTS_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11280;old_locus_tag=YPTS_2234 NC_010634.1 Protein Homology CDS 2460061 2460954 . + 0 ID=cds2173;Parent=gene2249;Dbxref=Genbank:WP_011192457.1;Name=WP_011192457.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011192457.1;transl_table=11 NC_010634.1 RefSeq gene 2461059 2463038 . - . ID=gene2250;Name=YPTS_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11285;old_locus_tag=YPTS_2235 NC_010634.1 Protein Homology CDS 2461059 2463038 . - 0 ID=cds2174;Parent=gene2250;Dbxref=Genbank:WP_011192458.1;Name=WP_011192458.1;gbkey=CDS;product=electron transport complex subunit C;protein_id=WP_011192458.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2461078 2461363 . + . ID=id165;gbkey=repeat_region NC_010634.1 RefSeq gene 2463031 2463654 . - . ID=gene2251;Name=YPTS_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11290;old_locus_tag=YPTS_2236 NC_010634.1 Protein Homology CDS 2463031 2463654 . - 0 ID=cds2175;Parent=gene2251;Dbxref=Genbank:WP_011192459.1;Name=WP_011192459.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transporter RnfB;protein_id=WP_011192459.1;transl_table=11 NC_010634.1 RefSeq gene 2463654 2464235 . - . ID=gene2252;Name=YPTS_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11295;old_locus_tag=YPTS_2237 NC_010634.1 Protein Homology CDS 2463654 2464235 . - 0 ID=cds2176;Parent=gene2252;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11 NC_010634.1 RefSeq gene 2464363 2464806 . - . ID=gene2253;Name=YPTS_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11300;old_locus_tag=YPTS_2238 NC_010634.1 Protein Homology CDS 2464363 2464806 . - 0 ID=cds2177;Parent=gene2253;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11 NC_010634.1 RefSeq gene 2465281 2467428 . + . ID=gene2254;Name=YPTS_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11305;old_locus_tag=YPTS_2239 NC_010634.1 Protein Homology CDS 2465281 2467428 . + 0 ID=cds2178;Parent=gene2254;Dbxref=Genbank:WP_011192460.1;Name=WP_011192460.1;gbkey=CDS;product=peptidase C39;protein_id=WP_011192460.1;transl_table=11 NC_010634.1 RefSeq gene 2467473 2468843 . + . ID=gene2255;Name=YPTS_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11310;old_locus_tag=YPTS_2240 NC_010634.1 Protein Homology CDS 2467473 2468843 . + 0 ID=cds2179;Parent=gene2255;Dbxref=Genbank:WP_012413726.1;Name=WP_012413726.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_012413726.1;transl_table=11 NC_010634.1 RefSeq gene 2468845 2470983 . + . ID=gene2256;Name=YPTS_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11315;old_locus_tag=YPTS_2241 NC_010634.1 Protein Homology CDS 2468845 2470983 . + 0 ID=cds2180;Parent=gene2256;Dbxref=Genbank:WP_011192462.1;Name=WP_011192462.1;gbkey=CDS;product=peptidase C39;protein_id=WP_011192462.1;transl_table=11 NC_010634.1 RefSeq gene 2471207 2472709 . - . ID=gene2257;Name=YPTS_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11320;old_locus_tag=YPTS_2242 NC_010634.1 Protein Homology CDS 2471207 2472709 . - 0 ID=cds2181;Parent=gene2257;Dbxref=Genbank:WP_011192463.1;Name=WP_011192463.1;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_011192463.1;transl_table=11 NC_010634.1 RefSeq gene 2472793 2474496 . - . ID=gene2258;Name=YPTS_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11325;old_locus_tag=YPTS_2243 NC_010634.1 Protein Homology CDS 2472793 2474496 . - 0 ID=cds2182;Parent=gene2258;Dbxref=Genbank:WP_011192464.1;Name=WP_011192464.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_011192464.1;transl_table=11 NC_010634.1 RefSeq gene 2474903 2475886 . + . ID=gene2259;Name=YPTS_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11330;old_locus_tag=YPTS_2244 NC_010634.1 Protein Homology CDS 2474903 2475886 . + 0 ID=cds2183;Parent=gene2259;Dbxref=Genbank:WP_011192465.1;Name=WP_011192465.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_011192465.1;transl_table=11 NC_010634.1 RefSeq gene 2475984 2477555 . + . ID=gene2260;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YPTS_RS11335;old_locus_tag=YPTS_2245 NC_010634.1 Protein Homology CDS 2475984 2477555 . + 0 ID=cds2184;Parent=gene2260;Dbxref=Genbank:WP_002210588.1;Name=WP_002210588.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_002210588.1;transl_table=11 NC_010634.1 RefSeq gene 2477573 2478622 . + . ID=gene2261;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YPTS_RS11340;old_locus_tag=YPTS_2246 NC_010634.1 Protein Homology CDS 2477573 2478622 . + 0 ID=cds2185;Parent=gene2261;Dbxref=Genbank:WP_011192466.1;Name=WP_011192466.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_011192466.1;transl_table=11 NC_010634.1 RefSeq gene 2478843 2479775 . + . ID=gene2262;Name=YPTS_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11345;old_locus_tag=YPTS_2247 NC_010634.1 Protein Homology CDS 2478843 2479775 . + 0 ID=cds2186;Parent=gene2262;Dbxref=Genbank:WP_011192467.1;Name=WP_011192467.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192467.1;transl_table=11 NC_010634.1 RefSeq gene 2479903 2480952 . + . ID=gene2263;Name=YPTS_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11350;old_locus_tag=YPTS_2248 NC_010634.1 Protein Homology CDS 2479903 2480952 . + 0 ID=cds2187;Parent=gene2263;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NC_010634.1 RefSeq gene 2481146 2482174 . + . ID=gene2264;Name=YPTS_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11355;old_locus_tag=YPTS_2249 NC_010634.1 Protein Homology CDS 2481146 2482174 . + 0 ID=cds2188;Parent=gene2264;Dbxref=Genbank:WP_011192468.1;Name=WP_011192468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192468.1;transl_table=11 NC_010634.1 RefSeq gene 2482349 2483353 . - . ID=gene2265;Name=YPTS_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11360;old_locus_tag=YPTS_2250 NC_010634.1 Protein Homology CDS 2482349 2483353 . - 0 ID=cds2189;Parent=gene2265;Dbxref=Genbank:WP_011192469.1;Name=WP_011192469.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_011192469.1;transl_table=11 NC_010634.1 RefSeq gene 2483742 2484998 . + . ID=gene2266;Name=YPTS_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11365;old_locus_tag=YPTS_2251 NC_010634.1 Protein Homology CDS 2483742 2484998 . + 0 ID=cds2190;Parent=gene2266;Dbxref=Genbank:WP_011192470.1;Name=WP_011192470.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192470.1;transl_table=11 NC_010634.1 RefSeq gene 2485171 2486100 . - . ID=gene2267;Name=YPTS_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11370;old_locus_tag=YPTS_2252 NC_010634.1 Protein Homology CDS 2485171 2486100 . - 0 ID=cds2191;Parent=gene2267;Dbxref=Genbank:WP_011192471.1;Name=WP_011192471.1;gbkey=CDS;product=PEP phosphonomutase;protein_id=WP_011192471.1;transl_table=11 NC_010634.1 RefSeq gene 2486124 2486219 . - . ID=gene2268;Name=YPTS_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11375;old_locus_tag=YPTS_2253 NC_010634.1 Protein Homology CDS 2486124 2486219 . - 0 ID=cds2192;Parent=gene2268;Dbxref=Genbank:WP_012304071.1;Name=WP_012304071.1;gbkey=CDS;product=PTS N-acetylglucosamine transporter subunit IIBC;protein_id=WP_012304071.1;transl_table=11 NC_010634.1 RefSeq gene 2486474 2487223 . + . ID=gene2269;Name=YPTS_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11380;old_locus_tag=YPTS_2254 NC_010634.1 Protein Homology CDS 2486474 2487223 . + 0 ID=cds2193;Parent=gene2269;Dbxref=Genbank:WP_012413727.1;Name=WP_012413727.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_012413727.1;transl_table=11 NC_010634.1 RefSeq gene 2487491 2489035 . - . ID=gene2270;Name=YPTS_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11385;old_locus_tag=YPTS_2255 NC_010634.1 Protein Homology CDS 2487491 2489035 . - 0 ID=cds2194;Parent=gene2270;Dbxref=Genbank:WP_011192473.1;Name=WP_011192473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192473.1;transl_table=11 NC_010634.1 RefSeq gene 2489275 2490450 . - . ID=gene2271;Name=YPTS_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11390;old_locus_tag=YPTS_2256 NC_010634.1 Protein Homology CDS 2489275 2490450 . - 0 ID=cds2195;Parent=gene2271;Dbxref=Genbank:WP_011192474.1;Name=WP_011192474.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_011192474.1;transl_table=11 NC_010634.1 RefSeq gene 2490734 2492131 . + . ID=gene2272;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YPTS_RS11395;old_locus_tag=YPTS_2257 NC_010634.1 Protein Homology CDS 2490734 2492131 . + 0 ID=cds2196;Parent=gene2272;Dbxref=Genbank:WP_011192475.1;Name=WP_011192475.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=WP_011192475.1;transl_table=11 NC_010634.1 RefSeq gene 2492211 2493146 . - . ID=gene2273;Name=YPTS_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11400;old_locus_tag=YPTS_2258 NC_010634.1 Protein Homology CDS 2492211 2493146 . - 0 ID=cds2197;Parent=gene2273;Dbxref=Genbank:WP_011192476.1;Name=WP_011192476.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_011192476.1;transl_table=11 NC_010634.1 RefSeq gene 2493351 2494649 . - . ID=gene2274;Name=YPTS_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11405;old_locus_tag=YPTS_2259 NC_010634.1 Protein Homology CDS 2493351 2494649 . - 0 ID=cds2198;Parent=gene2274;Dbxref=Genbank:WP_011192477.1;Name=WP_011192477.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192477.1;transl_table=11 NC_010634.1 RefSeq gene 2494862 2495776 . + . ID=gene2275;Name=YPTS_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11410;old_locus_tag=YPTS_2260 NC_010634.1 Protein Homology CDS 2494862 2495776 . + 0 ID=cds2199;Parent=gene2275;Dbxref=Genbank:WP_011192478.1;Name=WP_011192478.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011192478.1;transl_table=11 NC_010634.1 RefSeq gene 2495955 2497172 . + . ID=gene2276;Name=YPTS_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11415;old_locus_tag=YPTS_2261 NC_010634.1 Protein Homology CDS 2495955 2497172 . + 0 ID=cds2200;Parent=gene2276;Dbxref=Genbank:WP_002210576.1;Name=WP_002210576.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210576.1;transl_table=11 NC_010634.1 RefSeq gene 2497396 2498064 . + . ID=gene2277;Name=YPTS_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11420;old_locus_tag=YPTS_2262 NC_010634.1 Protein Homology CDS 2497396 2498064 . + 0 ID=cds2201;Parent=gene2277;Dbxref=Genbank:WP_002210575.1;Name=WP_002210575.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002210575.1;transl_table=11 NC_010634.1 RefSeq gene 2498169 2499449 . - . ID=gene2278;Name=YPTS_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11425;old_locus_tag=YPTS_2263 NC_010634.1 Protein Homology CDS 2498169 2499449 . - 0 ID=cds2202;Parent=gene2278;Dbxref=Genbank:WP_012413730.1;Name=WP_012413730.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_012413730.1;transl_table=11 NC_010634.1 RefSeq gene 2499595 2499840 . - . ID=gene2279;Name=YPTS_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11430;old_locus_tag=YPTS_2264 NC_010634.1 Protein Homology CDS 2499595 2499840 . - 0 ID=cds2203;Parent=gene2279;Dbxref=Genbank:WP_011192481.1;Name=WP_011192481.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192481.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2499820 2505165 . + . ID=id166;gbkey=repeat_region NC_010634.1 RefSeq gene 2500054 2500425 . - . ID=gene2280;Name=YPTS_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11435;old_locus_tag=YPTS_2265 NC_010634.1 Protein Homology CDS 2500054 2500425 . - 0 ID=cds2204;Parent=gene2280;Dbxref=Genbank:WP_032466936.1;Name=WP_032466936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466936.1;transl_table=11 NC_010634.1 RefSeq gene 2500637 2501386 . - . ID=gene2281;Name=YPTS_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11440;old_locus_tag=YPTS_2266 NC_010634.1 Protein Homology CDS 2500637 2501386 . - 0 ID=cds2205;Parent=gene2281;Dbxref=Genbank:WP_011192483.1;Name=WP_011192483.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;product=malonic semialdehyde reductase;protein_id=WP_011192483.1;transl_table=11 NC_010634.1 RefSeq gene 2501500 2502480 . - . ID=gene2282;Name=YPTS_RS11445;end_range=2502480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS11445;old_locus_tag=YPTS_2267;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 2501500 2502480 . - 0 ID=cds2206;Parent=gene2282;end_range=2502480,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=AAA family ATPase;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 2502727 2503098 . - . ID=gene2283;Name=YPTS_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11450;old_locus_tag=YPTS_2268 NC_010634.1 Protein Homology CDS 2502727 2503098 . - 0 ID=cds2207;Parent=gene2283;Dbxref=Genbank:WP_032466936.1;Name=WP_032466936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466936.1;transl_table=11 NC_010634.1 RefSeq gene 2503310 2504059 . - . ID=gene2284;Name=YPTS_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11455;old_locus_tag=YPTS_2269 NC_010634.1 Protein Homology CDS 2503310 2504059 . - 0 ID=cds2208;Parent=gene2284;Dbxref=Genbank:WP_011192483.1;Name=WP_011192483.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;product=malonic semialdehyde reductase;protein_id=WP_011192483.1;transl_table=11 NC_010634.1 RefSeq gene 2504173 2505924 . - . ID=gene2285;Name=YPTS_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11460;old_locus_tag=YPTS_2270 NC_010634.1 Protein Homology CDS 2504173 2505924 . - 0 ID=cds2209;Parent=gene2285;Dbxref=Genbank:WP_012413732.1;Name=WP_012413732.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_012413732.1;transl_table=11 NC_010634.1 RefSeq gene 2506220 2507740 . + . ID=gene2286;Name=YPTS_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11465;old_locus_tag=YPTS_2271 NC_010634.1 Protein Homology CDS 2506220 2507740 . + 0 ID=cds2210;Parent=gene2286;Dbxref=Genbank:WP_011192485.1;Name=WP_011192485.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_011192485.1;transl_table=11 NC_010634.1 RefSeq gene 2508021 2509553 . - . ID=gene2287;Name=YPTS_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11470;old_locus_tag=YPTS_2272 NC_010634.1 Protein Homology CDS 2508021 2509553 . - 0 ID=cds2211;Parent=gene2287;Dbxref=Genbank:WP_012304062.1;Name=WP_012304062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304062.1;transl_table=11 NC_010634.1 RefSeq gene 2510127 2511050 . + . ID=gene2288;Name=YPTS_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11475;old_locus_tag=YPTS_2273 NC_010634.1 Protein Homology CDS 2510127 2511050 . + 0 ID=cds2212;Parent=gene2288;Dbxref=Genbank:WP_011192487.1;Name=WP_011192487.1;gbkey=CDS;product=drug/metabolite transporter DMT permease;protein_id=WP_011192487.1;transl_table=11 NC_010634.1 RefSeq gene 2511598 2511708 . - . ID=gene2289;Name=YPTS_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11480;old_locus_tag=YPTS_2275 NC_010634.1 Protein Homology CDS 2511598 2511708 . - 0 ID=cds2213;Parent=gene2289;Dbxref=Genbank:WP_002214514.1;Name=WP_002214514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214514.1;transl_table=11 NC_010634.1 RefSeq gene 2511856 2513034 . - . ID=gene2290;Name=YPTS_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11485;old_locus_tag=YPTS_2276 NC_010634.1 Protein Homology CDS 2511856 2513034 . - 0 ID=cds2214;Parent=gene2290;Dbxref=Genbank:WP_011192488.1;Name=WP_011192488.1;gbkey=CDS;product=aminotransferase;protein_id=WP_011192488.1;transl_table=11 NC_010634.1 RefSeq gene 2513021 2514475 . - . ID=gene2291;Name=YPTS_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11490;old_locus_tag=YPTS_2277 NC_010634.1 Protein Homology CDS 2513021 2514475 . - 0 ID=cds2215;Parent=gene2291;Dbxref=Genbank:WP_012413734.1;Name=WP_012413734.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_012413734.1;transl_table=11 NC_010634.1 RefSeq gene 2514620 2515636 . - . ID=gene2292;Name=YPTS_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11495;old_locus_tag=YPTS_2279 NC_010634.1 Protein Homology CDS 2514620 2515636 . - 0 ID=cds2216;Parent=gene2292;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NC_010634.1 RefSeq gene 2515700 2516170 . - . ID=gene2293;Name=YPTS_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11500;old_locus_tag=YPTS_2280 NC_010634.1 Protein Homology CDS 2515700 2516170 . - 0 ID=cds2217;Parent=gene2293;Dbxref=Genbank:WP_011192489.1;Name=WP_011192489.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192489.1;transl_table=11 NC_010634.1 RefSeq gene 2516314 2517264 . - . ID=gene2294;Name=YPTS_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11505;old_locus_tag=YPTS_2281 NC_010634.1 Protein Homology CDS 2516314 2517264 . - 0 ID=cds2218;Parent=gene2294;Dbxref=Genbank:WP_011192490.1;Name=WP_011192490.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011192490.1;transl_table=11 NC_010634.1 RefSeq gene 2517443 2518486 . - . ID=gene2295;Name=YPTS_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11510;old_locus_tag=YPTS_2282 NC_010634.1 Protein Homology CDS 2517443 2518486 . - 0 ID=cds2219;Parent=gene2295;Dbxref=Genbank:WP_042592909.1;Name=WP_042592909.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_042592909.1;transl_table=11 NC_010634.1 RefSeq gene 2518531 2520069 . - . ID=gene2296;Name=YPTS_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11515;old_locus_tag=YPTS_2283 NC_010634.1 Protein Homology CDS 2518531 2520069 . - 0 ID=cds2220;Parent=gene2296;Dbxref=Genbank:WP_012413735.1;Name=WP_012413735.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012413735.1;transl_table=11 NC_010634.1 RefSeq gene 2520066 2520719 . - . ID=gene2297;Name=YPTS_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11520;old_locus_tag=YPTS_2284 NC_010634.1 Protein Homology CDS 2520066 2520719 . - 0 ID=cds2221;Parent=gene2297;Dbxref=Genbank:WP_012413736.1;Name=WP_012413736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413736.1;transl_table=11 NC_010634.1 RefSeq gene 2521570 2522505 . + . ID=gene2298;Name=YPTS_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11525;old_locus_tag=YPTS_2286 NC_010634.1 Protein Homology CDS 2521570 2522505 . + 0 ID=cds2222;Parent=gene2298;Dbxref=Genbank:WP_049772379.1;Name=WP_049772379.1;gbkey=CDS;product=myristoyl transferase;protein_id=WP_049772379.1;transl_table=11 NC_010634.1 RefSeq gene 2522509 2523330 . + . ID=gene2299;Name=YPTS_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11530;old_locus_tag=YPTS_2287 NC_010634.1 Protein Homology CDS 2522509 2523330 . + 0 ID=cds2223;Parent=gene2299;Dbxref=Genbank:WP_002211034.1;Name=WP_002211034.1;gbkey=CDS;product=sulfonate ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NC_010634.1 RefSeq gene 2523340 2524158 . + . ID=gene2300;Name=YPTS_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11535;old_locus_tag=YPTS_2288 NC_010634.1 Protein Homology CDS 2523340 2524158 . + 0 ID=cds2224;Parent=gene2300;Dbxref=Genbank:WP_002223602.1;Name=WP_002223602.1;gbkey=CDS;product=sulfonate ABC transporter ATP-binding protein;protein_id=WP_002223602.1;transl_table=11 NC_010634.1 RefSeq gene 2524583 2526073 . - . ID=gene2301;Name=YPTS_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11540;old_locus_tag=YPTS_2289 NC_010634.1 Protein Homology CDS 2524583 2526073 . - 0 ID=cds2225;Parent=gene2301;Dbxref=Genbank:WP_002223601.1;Name=WP_002223601.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_002223601.1;transl_table=11 NC_010634.1 RefSeq gene 2526279 2527727 . + . ID=gene2302;Name=YPTS_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11545;old_locus_tag=YPTS_2290 NC_010634.1 Protein Homology CDS 2526279 2527727 . + 0 ID=cds2226;Parent=gene2302;Dbxref=Genbank:WP_012413739.1;Name=WP_012413739.1;gbkey=CDS;product=virulence factor;protein_id=WP_012413739.1;transl_table=11 NC_010634.1 RefSeq gene 2527732 2530803 . + . ID=gene2303;Name=YPTS_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11550;old_locus_tag=YPTS_2291 NC_010634.1 Protein Homology CDS 2527732 2530803 . + 0 ID=cds2227;Parent=gene2303;Dbxref=Genbank:WP_012413740.1;Name=WP_012413740.1;gbkey=CDS;product=virulence factor SrfB;protein_id=WP_012413740.1;transl_table=11 NC_010634.1 RefSeq gene 2530800 2533340 . + . ID=gene2304;Name=YPTS_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11555;old_locus_tag=YPTS_2292 NC_010634.1 Protein Homology CDS 2530800 2533340 . + 0 ID=cds2228;Parent=gene2304;Dbxref=Genbank:WP_012413741.1;Name=WP_012413741.1;gbkey=CDS;product=virulence factor;protein_id=WP_012413741.1;transl_table=11 NC_010634.1 RefSeq gene 2533509 2534303 . - . ID=gene2305;Name=YPTS_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11560;old_locus_tag=YPTS_2293 NC_010634.1 Protein Homology CDS 2533509 2534303 . - 0 ID=cds2229;Parent=gene2305;Dbxref=Genbank:WP_012413742.1;Name=WP_012413742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413742.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2534473 2534640 . + . ID=id167;gbkey=repeat_region NC_010634.1 RefSeq gene 2535152 2536819 . + . ID=gene2306;Name=YPTS_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11565;old_locus_tag=YPTS_2294 NC_010634.1 Protein Homology CDS 2535152 2536819 . + 0 ID=cds2230;Parent=gene2306;Dbxref=Genbank:WP_011192500.1;Name=WP_011192500.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_011192500.1;transl_table=11 NC_010634.1 RefSeq gene 2536881 2537168 . + . ID=gene2307;Name=YPTS_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11570;old_locus_tag=YPTS_2295 NC_010634.1 Protein Homology CDS 2536881 2537168 . + 0 ID=cds2231;Parent=gene2307;Dbxref=Genbank:WP_029793741.1;Name=WP_029793741.1;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;gbkey=CDS;product=acetolactate synthase 1 regulatory subunit;protein_id=WP_029793741.1;transl_table=11 NC_010634.1 RefSeq gene 2537235 2537909 . - . ID=gene2308;Name=YPTS_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11575;old_locus_tag=YPTS_2296 NC_010634.1 Protein Homology CDS 2537235 2537909 . - 0 ID=cds2232;Parent=gene2308;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11 NC_010634.1 RefSeq gene 2538055 2539440 . - . ID=gene2309;Name=YPTS_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11580 NC_010634.1 Protein Homology CDS 2538055 2539440 . - 0 ID=cds2233;Parent=gene2309;Dbxref=Genbank:WP_032466939.1;Name=WP_032466939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466939.1;transl_table=11 NC_010634.1 RefSeq gene 2539440 2540451 . - . ID=gene2310;Name=YPTS_RS11585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS11585;pseudo=true NC_010634.1 Protein Homology CDS 2539440 2540451 . - 0 ID=cds2234;Parent=gene2310;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 2540998 2542443 . - . ID=gene2311;Name=YPTS_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11590;old_locus_tag=YPTS_2298 NC_010634.1 Protein Homology CDS 2540998 2542443 . - 0 ID=cds2235;Parent=gene2311;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NC_010634.1 RefSeq gene 2542701 2543219 . + . ID=gene2312;Name=YPTS_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11595;old_locus_tag=YPTS_2299 NC_010634.1 Protein Homology CDS 2542701 2543219 . + 0 ID=cds2236;Parent=gene2312;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11 NC_010634.1 RefSeq gene 2543292 2544044 . + . ID=gene2313;Name=YPTS_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11600;old_locus_tag=YPTS_2300 NC_010634.1 Protein Homology CDS 2543292 2544044 . + 0 ID=cds2237;Parent=gene2313;Dbxref=Genbank:WP_011192502.1;Name=WP_011192502.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate/nitrate reduction transcriptional regulator;protein_id=WP_011192502.1;transl_table=11 NC_010634.1 RefSeq gene 2544179 2545135 . + . ID=gene2314;Name=YPTS_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11605;old_locus_tag=YPTS_2301 NC_010634.1 Protein Homology CDS 2544179 2545135 . + 0 ID=cds2238;Parent=gene2314;Dbxref=Genbank:WP_002211021.1;Name=WP_002211021.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein E;protein_id=WP_002211021.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2545190 2545365 . + . ID=id168;gbkey=repeat_region NC_010634.1 RefSeq gene 2545411 2546805 . - . ID=gene2315;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YPTS_RS11610;old_locus_tag=YPTS_2302 NC_010634.1 Protein Homology CDS 2545411 2546805 . - 0 ID=cds2239;Parent=gene2315;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11 NC_010634.1 RefSeq gene 2546878 2548404 . - . ID=gene2316;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YPTS_RS11615;old_locus_tag=YPTS_2303 NC_010634.1 Protein Homology CDS 2546878 2548404 . - 0 ID=cds2240;Parent=gene2316;Dbxref=Genbank:WP_012413744.1;Name=WP_012413744.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_012413744.1;transl_table=11 NC_010634.1 RefSeq gene 2548525 2548728 . - . ID=gene2317;Name=YPTS_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11620 NC_010634.1 Protein Homology CDS 2548525 2548728 . - 0 ID=cds2241;Parent=gene2317;Dbxref=Genbank:WP_011192504.1;Name=WP_011192504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192504.1;transl_table=11 NC_010634.1 RefSeq gene 2548934 2549887 . + . ID=gene2318;Name=YPTS_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11625;old_locus_tag=YPTS_2304 NC_010634.1 Protein Homology CDS 2548934 2549887 . + 0 ID=cds2242;Parent=gene2318;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11 NC_010634.1 RefSeq gene 2550157 2551548 . + . ID=gene2319;Name=YPTS_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11630;old_locus_tag=YPTS_2305 NC_010634.1 Protein Homology CDS 2550157 2551548 . + 0 ID=cds2243;Parent=gene2319;Dbxref=Genbank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_002211017.1;transl_table=11 NC_010634.1 RefSeq gene 2551572 2551988 . - . ID=gene2320;Name=YPTS_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11635;old_locus_tag=YPTS_2306 NC_010634.1 Protein Homology CDS 2551572 2551988 . - 0 ID=cds2244;Parent=gene2320;Dbxref=Genbank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NC_010634.1 RefSeq gene 2552285 2553031 . + . ID=gene2321;Name=YPTS_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11640;old_locus_tag=YPTS_2307 NC_010634.1 Protein Homology CDS 2552285 2553031 . + 0 ID=cds2245;Parent=gene2321;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11 NC_010634.1 RefSeq gene 2553031 2554335 . + . ID=gene2322;Name=YPTS_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11645;old_locus_tag=YPTS_2308 NC_010634.1 Protein Homology CDS 2553031 2554335 . + 0 ID=cds2246;Parent=gene2322;Dbxref=Genbank:WP_002232819.1;Name=WP_002232819.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002232819.1;transl_table=11 NC_010634.1 RefSeq gene 2554413 2555912 . + . ID=gene2323;Name=YPTS_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11650;old_locus_tag=YPTS_2309 NC_010634.1 Protein Homology CDS 2554413 2555912 . + 0 ID=cds2247;Parent=gene2323;Dbxref=Genbank:WP_012413745.1;Name=WP_012413745.1;gbkey=CDS;product=peptidase M32;protein_id=WP_012413745.1;transl_table=11 NC_010634.1 RefSeq gene 2556751 2559735 . + . ID=gene2324;Name=YPTS_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11655;old_locus_tag=YPTS_2310 NC_010634.1 Protein Homology CDS 2556751 2559735 . + 0 ID=cds2248;Parent=gene2324;Dbxref=Genbank:WP_012413746.1;Name=WP_012413746.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_012413746.1;transl_table=11 NC_010634.1 RefSeq gene 2559839 2559997 . - . ID=gene2325;Name=YPTS_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11660 NC_010634.1 Protein Homology CDS 2559839 2559997 . - 0 ID=cds2249;Parent=gene2325;Dbxref=Genbank:WP_002214618.1;Name=WP_002214618.1;gbkey=CDS;product=invertase;protein_id=WP_002214618.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2560351 2560523 . + . ID=id169;gbkey=repeat_region NC_010634.1 RefSeq gene 2560562 2561140 . - . ID=gene2326;Name=YPTS_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11665;old_locus_tag=YPTS_2311 NC_010634.1 Protein Homology CDS 2560562 2561140 . - 0 ID=cds2250;Parent=gene2326;Dbxref=Genbank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211011.1;transl_table=11 NC_010634.1 RefSeq gene 2561166 2561720 . - . ID=gene2327;Name=YPTS_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11670;old_locus_tag=YPTS_2312 NC_010634.1 Protein Homology CDS 2561166 2561720 . - 0 ID=cds2251;Parent=gene2327;Dbxref=Genbank:WP_002211010.1;Name=WP_002211010.1;gbkey=CDS;product=cytochrome B561;protein_id=WP_002211010.1;transl_table=11 NC_010634.1 RefSeq gene 2562115 2562327 . + . ID=gene2328;Name=YPTS_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11675 NC_010634.1 Protein Homology CDS 2562115 2562327 . + 0 ID=cds2252;Parent=gene2328;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11 NC_010634.1 RefSeq gene 2562324 2562662 . + . ID=gene2329;Name=YPTS_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11680;old_locus_tag=YPTS_2313 NC_010634.1 Protein Homology CDS 2562324 2562662 . + 0 ID=cds2253;Parent=gene2329;Dbxref=Genbank:WP_012413747.1;Name=WP_012413747.1;gbkey=CDS;product=acid-shock protein;protein_id=WP_012413747.1;transl_table=11 NC_010634.1 RefSeq gene 2562996 2563838 . + . ID=gene2330;Name=YPTS_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11685;old_locus_tag=YPTS_2314 NC_010634.1 Protein Homology CDS 2562996 2563838 . + 0 ID=cds2254;Parent=gene2330;Dbxref=Genbank:WP_011192509.1;Name=WP_011192509.1;gbkey=CDS;product=peptidase;protein_id=WP_011192509.1;transl_table=11 NC_010634.1 RefSeq gene 2563894 2564217 . - . ID=gene2331;Name=YPTS_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11690;old_locus_tag=YPTS_2315 NC_010634.1 Protein Homology CDS 2563894 2564217 . - 0 ID=cds2255;Parent=gene2331;Dbxref=Genbank:WP_002211007.1;Name=WP_002211007.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211007.1;transl_table=11 NC_010634.1 RefSeq gene 2564214 2564543 . - . ID=gene2332;Name=YPTS_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11695;old_locus_tag=YPTS_2316 NC_010634.1 Protein Homology CDS 2564214 2564543 . - 0 ID=cds2256;Parent=gene2332;Dbxref=Genbank:WP_002214609.1;Name=WP_002214609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214609.1;transl_table=11 NC_010634.1 RefSeq gene 2564882 2568724 . - . ID=gene2333;Name=YPTS_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11700;old_locus_tag=YPTS_2317 NC_010634.1 Protein Homology CDS 2564882 2568724 . - 0 ID=cds2257;Parent=gene2333;Dbxref=Genbank:WP_011192510.1;Name=WP_011192510.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_011192510.1;transl_table=11 NC_010634.1 RefSeq gene 2569214 2569819 . + . ID=gene2334;Name=YPTS_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11705;old_locus_tag=YPTS_2318 NC_010634.1 Protein Homology CDS 2569214 2569819 . + 0 ID=cds2258;Parent=gene2334;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NC_010634.1 RefSeq gene 2569940 2570896 . - . ID=gene2335;Name=YPTS_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11710;old_locus_tag=YPTS_2319 NC_010634.1 Protein Homology CDS 2569940 2570896 . - 0 ID=cds2259;Parent=gene2335;Dbxref=Genbank:WP_002211003.1;Name=WP_002211003.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211003.1;transl_table=11 NC_010634.1 RefSeq gene 2571106 2572497 . + . ID=gene2336;Name=YPTS_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11715;old_locus_tag=YPTS_2320 NC_010634.1 Protein Homology CDS 2571106 2572497 . + 0 ID=cds2260;Parent=gene2336;Dbxref=Genbank:WP_011192511.1;Name=WP_011192511.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_011192511.1;transl_table=11 NC_010634.1 RefSeq gene 2572697 2573068 . - . ID=gene2337;Name=YPTS_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11720;old_locus_tag=YPTS_2321 NC_010634.1 Protein Homology CDS 2572697 2573068 . - 0 ID=cds2261;Parent=gene2337;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11 NC_010634.1 RefSeq gene 2573078 2573272 . - . ID=gene2338;Name=YPTS_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11725;old_locus_tag=YPTS_2322 NC_010634.1 Protein Homology CDS 2573078 2573272 . - 0 ID=cds2262;Parent=gene2338;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11 NC_010634.1 RefSeq gene 2573269 2575965 . - . ID=gene2339;Name=YPTS_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11730;old_locus_tag=YPTS_2323 NC_010634.1 Protein Homology CDS 2573269 2575965 . - 0 ID=cds2263;Parent=gene2339;Dbxref=Genbank:WP_012413749.1;Name=WP_012413749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413749.1;transl_table=11 NC_010634.1 RefSeq gene 2576231 2577223 . + . ID=gene2340;Name=YPTS_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11735;old_locus_tag=YPTS_2324 NC_010634.1 Protein Homology CDS 2576231 2577223 . + 0 ID=cds2264;Parent=gene2340;Dbxref=Genbank:WP_002210998.1;Name=WP_002210998.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210998.1;transl_table=11 NC_010634.1 RefSeq gene 2577293 2577745 . + . ID=gene2341;Name=YPTS_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11740;old_locus_tag=YPTS_2325 NC_010634.1 Protein Homology CDS 2577293 2577745 . + 0 ID=cds2265;Parent=gene2341;Dbxref=Genbank:WP_002214605.1;Name=WP_002214605.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_002214605.1;transl_table=11 NC_010634.1 RefSeq gene 2577803 2578114 . - . ID=gene2342;Name=YPTS_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11745;old_locus_tag=YPTS_2326 NC_010634.1 Protein Homology CDS 2577803 2578114 . - 0 ID=cds2266;Parent=gene2342;Dbxref=Genbank:WP_024062893.1;Name=WP_024062893.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024062893.1;transl_table=11 NC_010634.1 RefSeq gene 2578429 2579088 . + . ID=gene2343;Name=YPTS_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11750;old_locus_tag=YPTS_2327 NC_010634.1 Protein Homology CDS 2578429 2579088 . + 0 ID=cds2267;Parent=gene2343;Dbxref=Genbank:WP_011192514.1;Name=WP_011192514.1;gbkey=CDS;product=methyltransferase;protein_id=WP_011192514.1;transl_table=11 NC_010634.1 RefSeq gene 2579148 2579480 . - . ID=gene2344;Name=YPTS_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11755;old_locus_tag=YPTS_2328 NC_010634.1 Protein Homology CDS 2579148 2579480 . - 0 ID=cds2268;Parent=gene2344;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11 NC_010634.1 RefSeq gene 2579959 2583492 . + . ID=gene2345;Name=YPTS_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11760;old_locus_tag=YPTS_2329 NC_010634.1 Protein Homology CDS 2579959 2583492 . + 0 ID=cds2269;Parent=gene2345;Dbxref=Genbank:WP_011192515.1;Name=WP_011192515.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_011192515.1;transl_table=11 NC_010634.1 RefSeq gene 2583767 2584708 . + . ID=gene2346;Name=YPTS_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11765;old_locus_tag=YPTS_2330 NC_010634.1 Protein Homology CDS 2583767 2584708 . + 0 ID=cds2270;Parent=gene2346;Dbxref=Genbank:WP_011192516.1;Name=WP_011192516.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_011192516.1;transl_table=11 NC_010634.1 RefSeq gene 2584979 2585983 . + . ID=gene2347;Name=YPTS_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11770;old_locus_tag=YPTS_2331 NC_010634.1 Protein Homology CDS 2584979 2585983 . + 0 ID=cds2271;Parent=gene2347;Dbxref=Genbank:WP_002210991.1;Name=WP_002210991.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002210991.1;transl_table=11 NC_010634.1 RefSeq gene 2586295 2587134 . + . ID=gene2348;Name=YPTS_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11775;old_locus_tag=YPTS_2333 NC_010634.1 Protein Homology CDS 2586295 2587134 . + 0 ID=cds2272;Parent=gene2348;Dbxref=Genbank:WP_011192517.1;Name=WP_011192517.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192517.1;transl_table=11 NC_010634.1 RefSeq gene 2587184 2587393 . - . ID=gene2349;Name=YPTS_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11780 NC_010634.1 Protein Homology CDS 2587184 2587393 . - 0 ID=cds2273;Parent=gene2349;Dbxref=Genbank:WP_002223628.1;Name=WP_002223628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223628.1;transl_table=11 NC_010634.1 RefSeq gene 2587508 2588491 . - . ID=gene2350;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YPTS_RS11785;old_locus_tag=YPTS_2334 NC_010634.1 Protein Homology CDS 2587508 2588491 . - 0 ID=cds2274;Parent=gene2350;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NC_010634.1 RefSeq gene 2588734 2590350 . - . ID=gene2351;Name=YPTS_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11790;old_locus_tag=YPTS_2335 NC_010634.1 Protein Homology CDS 2588734 2590350 . - 0 ID=cds2275;Parent=gene2351;Dbxref=Genbank:WP_002210987.1;Name=WP_002210987.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11 NC_010634.1 RefSeq gene 2590791 2591498 . + . ID=gene2352;Name=YPTS_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11795;old_locus_tag=YPTS_2336 NC_010634.1 Protein Homology CDS 2590791 2591498 . + 0 ID=cds2276;Parent=gene2352;Dbxref=Genbank:WP_038823925.1;Name=WP_038823925.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_038823925.1;transl_table=11 NC_010634.1 RefSeq gene 2591540 2592520 . - . ID=gene2353;Name=YPTS_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11800;old_locus_tag=YPTS_2337 NC_010634.1 Protein Homology CDS 2591540 2592520 . - 0 ID=cds2277;Parent=gene2353;Dbxref=Genbank:WP_012413751.1;Name=WP_012413751.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=L-Ala-D/L-Glu epimerase;protein_id=WP_012413751.1;transl_table=11 NC_010634.1 RefSeq gene 2592683 2593186 . + . ID=gene2354;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YPTS_RS11805;old_locus_tag=YPTS_2338 NC_010634.1 Protein Homology CDS 2592683 2593186 . + 0 ID=cds2278;Parent=gene2354;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NC_010634.1 RefSeq gene 2593350 2594927 . - . ID=gene2355;Name=YPTS_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11810;old_locus_tag=YPTS_2339 NC_010634.1 Protein Homology CDS 2593350 2594927 . - 0 ID=cds2279;Parent=gene2355;Dbxref=Genbank:WP_011192519.1;Name=WP_011192519.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192519.1;transl_table=11 NC_010634.1 RefSeq gene 2595264 2595710 . + . ID=gene2356;Name=YPTS_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11815;old_locus_tag=YPTS_2340 NC_010634.1 Protein Homology CDS 2595264 2595710 . + 0 ID=cds2280;Parent=gene2356;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11 NC_010634.1 RefSeq gene 2595772 2596230 . + . ID=gene2357;Name=YPTS_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11820;old_locus_tag=YPTS_2341 NC_010634.1 Protein Homology CDS 2595772 2596230 . + 0 ID=cds2281;Parent=gene2357;Dbxref=Genbank:WP_011192520.1;Name=WP_011192520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192520.1;transl_table=11 NC_010634.1 RefSeq gene 2596240 2597301 . - . ID=gene2358;Name=YPTS_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11825;old_locus_tag=YPTS_2342 NC_010634.1 Protein Homology CDS 2596240 2597301 . - 0 ID=cds2282;Parent=gene2358;Dbxref=Genbank:WP_012413752.1;Name=WP_012413752.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413752.1;transl_table=11 NC_010634.1 RefSeq gene 2597298 2598695 . - . ID=gene2359;Name=YPTS_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11830;old_locus_tag=YPTS_2343 NC_010634.1 Protein Homology CDS 2597298 2598695 . - 0 ID=cds2283;Parent=gene2359;Dbxref=Genbank:WP_012105043.1;Name=WP_012105043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105043.1;transl_table=11 NC_010634.1 RefSeq gene 2598676 2598915 . - . ID=gene2360;Name=YPTS_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11835;old_locus_tag=YPTS_2344 NC_010634.1 Protein Homology CDS 2598676 2598915 . - 0 ID=cds2284;Parent=gene2360;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11 NC_010634.1 RefSeq gene 2599003 2599362 . - . ID=gene2361;Name=YPTS_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11840;old_locus_tag=YPTS_2345 NC_010634.1 Protein Homology CDS 2599003 2599362 . - 0 ID=cds2285;Parent=gene2361;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11 NC_010634.1 RefSeq gene 2599362 2599589 . - . ID=gene2362;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YPTS_RS11845;old_locus_tag=YPTS_2346 NC_010634.1 Protein Homology CDS 2599362 2599589 . - 0 ID=cds2286;Parent=gene2362;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11 NC_010634.1 RefSeq gene 2599751 2600416 . - . ID=gene2363;Name=YPTS_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11850;old_locus_tag=YPTS_2347 NC_010634.1 Protein Homology CDS 2599751 2600416 . - 0 ID=cds2287;Parent=gene2363;Dbxref=Genbank:WP_002210975.1;Name=WP_002210975.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_002210975.1;transl_table=11 NC_010634.1 RefSeq gene 2600661 2601689 . + . ID=gene2364;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YPTS_RS11855;old_locus_tag=YPTS_2348 NC_010634.1 Protein Homology CDS 2600661 2601689 . + 0 ID=cds2288;Parent=gene2364;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11 NC_010634.1 RefSeq gene 2602288 2603931 . + . ID=gene2365;Name=YPTS_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11865;old_locus_tag=YPTS_2349 NC_010634.1 Protein Homology CDS 2602288 2603931 . + 0 ID=cds2289;Parent=gene2365;Dbxref=Genbank:WP_011192522.1;Name=WP_011192522.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein sapA;protein_id=WP_011192522.1;transl_table=11 NC_010634.1 RefSeq gene 2603928 2604893 . + . ID=gene2366;Name=YPTS_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11870;old_locus_tag=YPTS_2350 NC_010634.1 Protein Homology CDS 2603928 2604893 . + 0 ID=cds2290;Parent=gene2366;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11 NC_010634.1 RefSeq gene 2604880 2605770 . + . ID=gene2367;Name=YPTS_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11875;old_locus_tag=YPTS_2351 NC_010634.1 Protein Homology CDS 2604880 2605770 . + 0 ID=cds2291;Parent=gene2367;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11 NC_010634.1 RefSeq gene 2605770 2606762 . + . ID=gene2368;Name=YPTS_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11880;old_locus_tag=YPTS_2352 NC_010634.1 Protein Homology CDS 2605770 2606762 . + 0 ID=cds2292;Parent=gene2368;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11 NC_010634.1 RefSeq gene 2606762 2607577 . + . ID=gene2369;Name=YPTS_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11885;old_locus_tag=YPTS_2353 NC_010634.1 Protein Homology CDS 2606762 2607577 . + 0 ID=cds2293;Parent=gene2369;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11 NC_010634.1 RefSeq gene 2607968 2609248 . + . ID=gene2370;Name=YPTS_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11890;old_locus_tag=YPTS_2354 NC_010634.1 Protein Homology CDS 2607968 2609248 . + 0 ID=cds2294;Parent=gene2370;Dbxref=Genbank:WP_002210967.1;Name=WP_002210967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210967.1;transl_table=11 NC_010634.1 RefSeq gene 2609891 2611396 . + . ID=gene2371;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=YPTS_RS11895;old_locus_tag=YPTS_2355 NC_010634.1 Protein Homology CDS 2609891 2611396 . + 0 ID=cds2295;Parent=gene2371;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11 NC_010634.1 RefSeq gene 2611652 2612242 . + . ID=gene2372;Name=YPTS_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11900;old_locus_tag=YPTS_2356 NC_010634.1 Protein Homology CDS 2611652 2612242 . + 0 ID=cds2296;Parent=gene2372;Dbxref=Genbank:WP_002210965.1;Name=WP_002210965.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210965.1;transl_table=11 NC_010634.1 RefSeq gene 2612488 2612751 . + . ID=gene2373;Name=YPTS_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11905;old_locus_tag=YPTS_2357 NC_010634.1 Protein Homology CDS 2612488 2612751 . + 0 ID=cds2297;Parent=gene2373;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11 NC_010634.1 RefSeq gene 2612996 2613601 . + . ID=gene2374;Name=YPTS_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11910;old_locus_tag=YPTS_2358 NC_010634.1 Protein Homology CDS 2612996 2613601 . + 0 ID=cds2298;Parent=gene2374;Dbxref=Genbank:WP_002210962.1;Name=WP_002210962.1;gbkey=CDS;product=glutathionine S-transferase;protein_id=WP_002210962.1;transl_table=11 NC_010634.1 RefSeq gene 2613661 2614521 . - . ID=gene2375;Name=YPTS_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11915;old_locus_tag=YPTS_2359 NC_010634.1 Protein Homology CDS 2613661 2614521 . - 0 ID=cds2299;Parent=gene2375;Dbxref=Genbank:WP_011192523.1;Name=WP_011192523.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_011192523.1;transl_table=11 NC_010634.1 RefSeq gene 2614676 2615950 . - . ID=gene2376;Name=YPTS_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11920;old_locus_tag=YPTS_2360 NC_010634.1 Protein Homology CDS 2614676 2615950 . - 0 ID=cds2300;Parent=gene2376;Dbxref=Genbank:WP_011192524.1;Name=WP_011192524.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_011192524.1;transl_table=11 NC_010634.1 RefSeq gene 2616132 2616785 . - . ID=gene2377;Name=YPTS_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11925;old_locus_tag=YPTS_2361 NC_010634.1 Protein Homology CDS 2616132 2616785 . - 0 ID=cds2301;Parent=gene2377;Dbxref=Genbank:WP_002210959.1;Name=WP_002210959.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NC_010634.1 RefSeq gene 2617209 2618105 . - . ID=gene2378;Name=YPTS_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11930;old_locus_tag=YPTS_2362 NC_010634.1 Protein Homology CDS 2617209 2618105 . - 0 ID=cds2302;Parent=gene2378;Dbxref=Genbank:WP_002210954.1;Name=WP_002210954.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210954.1;transl_table=11 NC_010634.1 RefSeq gene 2618237 2618476 . - . ID=gene2379;Name=YPTS_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11935;old_locus_tag=YPTS_2363 NC_010634.1 Protein Homology CDS 2618237 2618476 . - 0 ID=cds2303;Parent=gene2379;Dbxref=Genbank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210953.1;transl_table=11 NC_010634.1 RefSeq gene 2618650 2620287 . + . ID=gene2380;Name=YPTS_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11940;old_locus_tag=YPTS_2364 NC_010634.1 Protein Homology CDS 2618650 2620287 . + 0 ID=cds2304;Parent=gene2380;Dbxref=Genbank:WP_002210952.1;Name=WP_002210952.1;gbkey=CDS;product=metal dependent hydrolase;protein_id=WP_002210952.1;transl_table=11 NC_010634.1 RefSeq gene 2620530 2621129 . + . ID=gene2381;Name=YPTS_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11945;old_locus_tag=YPTS_2365 NC_010634.1 Protein Homology CDS 2620530 2621129 . + 0 ID=cds2305;Parent=gene2381;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NC_010634.1 RefSeq gene 2621217 2622314 . + . ID=gene2382;Name=YPTS_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11950;old_locus_tag=YPTS_2366 NC_010634.1 Protein Homology CDS 2621217 2622314 . + 0 ID=cds2306;Parent=gene2382;Dbxref=Genbank:WP_011192525.1;Name=WP_011192525.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_011192525.1;transl_table=11 NC_010634.1 RefSeq gene 2622535 2625483 . - . ID=gene2383;Name=YPTS_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11955;old_locus_tag=YPTS_2367 NC_010634.1 Protein Homology CDS 2622535 2625483 . - 0 ID=cds2307;Parent=gene2383;Dbxref=Genbank:WP_012413753.1;Name=WP_012413753.1;gbkey=CDS;product=toxin;protein_id=WP_012413753.1;transl_table=11 NC_010634.1 RefSeq gene 2625756 2626163 . + . ID=gene2384;Name=YPTS_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11960;old_locus_tag=YPTS_2368 NC_010634.1 Protein Homology CDS 2625756 2626163 . + 0 ID=cds2308;Parent=gene2384;Dbxref=Genbank:WP_011192527.1;Name=WP_011192527.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=glyoxalase I;protein_id=WP_011192527.1;transl_table=11 NC_010634.1 RefSeq gene 2626242 2626922 . + . ID=gene2385;Name=YPTS_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11965;old_locus_tag=YPTS_2369 NC_010634.1 Protein Homology CDS 2626242 2626922 . + 0 ID=cds2309;Parent=gene2385;Dbxref=Genbank:WP_012413754.1;Name=WP_012413754.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_012413754.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2626959 2627133 . + . ID=id170;gbkey=repeat_region NC_010634.1 RefSeq gene 2627231 2627581 . - . ID=gene2386;Name=YPTS_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11970;old_locus_tag=YPTS_2370 NC_010634.1 Protein Homology CDS 2627231 2627581 . - 0 ID=cds2310;Parent=gene2386;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NC_010634.1 RefSeq gene 2627681 2627902 . - . ID=gene2387;Name=YPTS_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11975;old_locus_tag=YPTS_2371 NC_010634.1 Protein Homology CDS 2627681 2627902 . - 0 ID=cds2311;Parent=gene2387;Dbxref=Genbank:WP_012413755.1;Name=WP_012413755.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413755.1;transl_table=11 NC_010634.1 RefSeq gene 2628021 2628872 . + . ID=gene2388;Name=YPTS_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11980;old_locus_tag=YPTS_2372 NC_010634.1 Protein Homology CDS 2628021 2628872 . + 0 ID=cds2312;Parent=gene2388;Dbxref=Genbank:WP_012105035.1;Name=WP_012105035.1;gbkey=CDS;product=hydrolase;protein_id=WP_012105035.1;transl_table=11 NC_010634.1 RefSeq gene 2629233 2629811 . + . ID=gene2389;Name=YPTS_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11985;old_locus_tag=YPTS_2373 NC_010634.1 Protein Homology CDS 2629233 2629811 . + 0 ID=cds2313;Parent=gene2389;Dbxref=Genbank:WP_011192530.1;Name=WP_011192530.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_011192530.1;transl_table=11 NC_010634.1 RefSeq gene 2630338 2631363 . + . ID=gene2390;Name=YPTS_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11990;old_locus_tag=YPTS_2374 NC_010634.1 Protein Homology CDS 2630338 2631363 . + 0 ID=cds2314;Parent=gene2390;Dbxref=Genbank:WP_002210943.1;Name=WP_002210943.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_002210943.1;transl_table=11 NC_010634.1 RefSeq gene 2631452 2632384 . - . ID=gene2391;Name=YPTS_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS11995;old_locus_tag=YPTS_2375 NC_010634.1 Protein Homology CDS 2631452 2632384 . - 0 ID=cds2315;Parent=gene2391;Dbxref=Genbank:WP_011192531.1;Name=WP_011192531.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011192531.1;transl_table=11 NC_010634.1 RefSeq gene 2632674 2633876 . + . ID=gene2392;Name=YPTS_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12000;old_locus_tag=YPTS_2376 NC_010634.1 Protein Homology CDS 2632674 2633876 . + 0 ID=cds2316;Parent=gene2392;Dbxref=Genbank:WP_002210941.1;Name=WP_002210941.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002210941.1;transl_table=11 NC_010634.1 RefSeq gene 2634356 2635507 . + . ID=gene2393;Name=YPTS_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12005;old_locus_tag=YPTS_2377 NC_010634.1 Protein Homology CDS 2634356 2635507 . + 0 ID=cds2317;Parent=gene2393;Dbxref=Genbank:WP_002210940.1;Name=WP_002210940.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11 NC_010634.1 RefSeq gene 2635558 2636214 . - . ID=gene2394;Name=YPTS_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12010;old_locus_tag=YPTS_2378 NC_010634.1 Protein Homology CDS 2635558 2636214 . - 0 ID=cds2318;Parent=gene2394;Dbxref=Genbank:WP_011192532.1;Name=WP_011192532.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_011192532.1;transl_table=11 NC_010634.1 RefSeq gene 2636463 2637836 . + . ID=gene2395;Name=YPTS_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12015;old_locus_tag=YPTS_2379 NC_010634.1 Protein Homology CDS 2636463 2637836 . + 0 ID=cds2319;Parent=gene2395;Dbxref=Genbank:WP_002210937.1;Name=WP_002210937.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_002210937.1;transl_table=11 NC_010634.1 RefSeq gene 2638079 2638155 . + . ID=gene2396;Name=YPTS_RS12020;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS12020;old_locus_tag=YPTS_R0041 NC_010634.1 tRNAscan-SE tRNA 2638079 2638155 . + . ID=rna69;Parent=gene2396;anticodon=(pos:2638113..2638115);gbkey=tRNA;product=tRNA-Val NC_010634.1 tRNAscan-SE exon 2638079 2638155 . + . ID=id171;Parent=rna69;anticodon=(pos:2638113..2638115);gbkey=tRNA;product=tRNA-Val NC_010634.1 RefSeq gene 2638215 2638291 . + . ID=gene2397;Name=YPTS_RS12025;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS12025;old_locus_tag=YPTS_R0042 NC_010634.1 tRNAscan-SE tRNA 2638215 2638291 . + . ID=rna70;Parent=gene2397;anticodon=(pos:2638249..2638251);gbkey=tRNA;product=tRNA-Val NC_010634.1 tRNAscan-SE exon 2638215 2638291 . + . ID=id172;Parent=rna70;anticodon=(pos:2638249..2638251);gbkey=tRNA;product=tRNA-Val NC_010634.1 RefSeq gene 2638442 2638518 . + . ID=gene2398;Name=YPTS_RS12030;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS12030;old_locus_tag=YPTS_R0043 NC_010634.1 tRNAscan-SE tRNA 2638442 2638518 . + . ID=rna71;Parent=gene2398;anticodon=(pos:2638476..2638478);gbkey=tRNA;product=tRNA-Val NC_010634.1 tRNAscan-SE exon 2638442 2638518 . + . ID=id173;Parent=rna71;anticodon=(pos:2638476..2638478);gbkey=tRNA;product=tRNA-Val NC_010634.1 RefSeq gene 2639093 2640505 . + . ID=gene2399;Name=YPTS_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12035;old_locus_tag=YPTS_2380 NC_010634.1 Protein Homology CDS 2639093 2640505 . + 0 ID=cds2320;Parent=gene2399;Dbxref=Genbank:WP_002210936.1;Name=WP_002210936.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002210936.1;transl_table=11 NC_010634.1 RefSeq gene 2640826 2641062 . + . ID=gene2400;Name=YPTS_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12040;old_locus_tag=YPTS_2381 NC_010634.1 Protein Homology CDS 2640826 2641062 . + 0 ID=cds2321;Parent=gene2400;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11 NC_010634.1 RefSeq gene 2641423 2642487 . - . ID=gene2401;Name=YPTS_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12045;old_locus_tag=YPTS_2382 NC_010634.1 Protein Homology CDS 2641423 2642487 . - 0 ID=cds2322;Parent=gene2401;Dbxref=Genbank:WP_002223648.1;Name=WP_002223648.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002223648.1;transl_table=11 NC_010634.1 RefSeq gene 2642758 2643180 . - . ID=gene2402;Name=YPTS_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12050;old_locus_tag=YPTS_2383 NC_010634.1 Protein Homology CDS 2642758 2643180 . - 0 ID=cds2323;Parent=gene2402;Dbxref=Genbank:WP_002211804.1;Name=WP_002211804.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NC_010634.1 RefSeq gene 2643269 2644489 . - . ID=gene2403;Name=YPTS_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12055;old_locus_tag=YPTS_2384 NC_010634.1 Protein Homology CDS 2643269 2644489 . - 0 ID=cds2324;Parent=gene2403;Dbxref=Genbank:WP_011192533.1;Name=WP_011192533.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_011192533.1;transl_table=11 NC_010634.1 RefSeq gene 2644486 2645811 . - . ID=gene2404;Name=YPTS_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12060;old_locus_tag=YPTS_2385 NC_010634.1 Protein Homology CDS 2644486 2645811 . - 0 ID=cds2325;Parent=gene2404;Dbxref=Genbank:WP_011192534.1;Name=WP_011192534.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_011192534.1;transl_table=11 NC_010634.1 RefSeq gene 2645786 2646532 . - . ID=gene2405;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YPTS_RS12065;old_locus_tag=YPTS_2386 NC_010634.1 Protein Homology CDS 2645786 2646532 . - 0 ID=cds2326;Parent=gene2405;Dbxref=Genbank:WP_011192535.1;Name=WP_011192535.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_011192535.1;transl_table=11 NC_010634.1 RefSeq gene 2646717 2648228 . - . ID=gene2406;Name=YPTS_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12070;old_locus_tag=YPTS_2387 NC_010634.1 Protein Homology CDS 2646717 2648228 . - 0 ID=cds2327;Parent=gene2406;Dbxref=Genbank:WP_011192536.1;Name=WP_011192536.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=cysteine desulfurase activator complex subunit SufB;protein_id=WP_011192536.1;transl_table=11 NC_010634.1 RefSeq gene 2648243 2648614 . - . ID=gene2407;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YPTS_RS12075;old_locus_tag=YPTS_2388 NC_010634.1 Protein Homology CDS 2648243 2648614 . - 0 ID=cds2328;Parent=gene2407;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11 NC_010634.1 RefSeq gene 2648792 2648950 . - . ID=gene2408;Name=YPTS_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12080 NC_010634.1 Protein Homology CDS 2648792 2648950 . - 0 ID=cds2329;Parent=gene2408;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11 NC_010634.1 RefSeq gene 2649209 2649625 . - . ID=gene2409;Name=YPTS_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12085;old_locus_tag=YPTS_2389 NC_010634.1 Protein Homology CDS 2649209 2649625 . - 0 ID=cds2330;Parent=gene2409;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11 NC_010634.1 RefSeq gene 2649747 2652803 . - . ID=gene2410;Name=YPTS_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12090;old_locus_tag=YPTS_2390 NC_010634.1 Protein Homology CDS 2649747 2652803 . - 0 ID=cds2331;Parent=gene2410;Dbxref=Genbank:WP_011192537.1;Name=WP_011192537.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192537.1;transl_table=11 NC_010634.1 RefSeq gene 2653424 2654527 . + . ID=gene2411;Name=YPTS_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12095;old_locus_tag=YPTS_2391 NC_010634.1 Protein Homology CDS 2653424 2654527 . + 0 ID=cds2332;Parent=gene2411;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2654961 2655107 . + . ID=id174;gbkey=repeat_region NC_010634.1 RefSeq gene 2655218 2657602 . - . ID=gene2412;Name=YPTS_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12100;old_locus_tag=YPTS_2393 NC_010634.1 Protein Homology CDS 2655218 2657602 . - 0 ID=cds2333;Parent=gene2412;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NC_010634.1 RefSeq gene 2657977 2658798 . + . ID=gene2413;Name=YPTS_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12105;old_locus_tag=YPTS_2394 NC_010634.1 Protein Homology CDS 2657977 2658798 . + 0 ID=cds2334;Parent=gene2413;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11 NC_010634.1 RefSeq gene 2658955 2660001 . + . ID=gene2414;Name=YPTS_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12110;old_locus_tag=YPTS_2395 NC_010634.1 Protein Homology CDS 2658955 2660001 . + 0 ID=cds2335;Parent=gene2414;Dbxref=Genbank:WP_011192538.1;Name=WP_011192538.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_011192538.1;transl_table=11 NC_010634.1 RefSeq gene 2660170 2661633 . - . ID=gene2415;Name=YPTS_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12115;old_locus_tag=YPTS_2396 NC_010634.1 Protein Homology CDS 2660170 2661633 . - 0 ID=cds2336;Parent=gene2415;Dbxref=Genbank:WP_011192539.1;Name=WP_011192539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192539.1;transl_table=11 NC_010634.1 RefSeq gene 2661685 2662701 . - . ID=gene2416;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YPTS_RS12120;old_locus_tag=YPTS_2397 NC_010634.1 Protein Homology CDS 2661685 2662701 . - 0 ID=cds2337;Parent=gene2416;Dbxref=Genbank:WP_011192540.1;Name=WP_011192540.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_011192540.1;transl_table=11 NC_010634.1 RefSeq gene 2662826 2663290 . - . ID=gene2417;Name=YPTS_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12125;old_locus_tag=YPTS_2398 NC_010634.1 Protein Homology CDS 2662826 2663290 . - 0 ID=cds2338;Parent=gene2417;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11 NC_010634.1 RefSeq gene 2663570 2663956 . - . ID=gene2418;Name=YPTS_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12130;old_locus_tag=YPTS_2399 NC_010634.1 Protein Homology CDS 2663570 2663956 . - 0 ID=cds2339;Parent=gene2418;Dbxref=Genbank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11 NC_010634.1 RefSeq gene 2663953 2664297 . - . ID=gene2419;Name=YPTS_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12135;old_locus_tag=YPTS_2400 NC_010634.1 Protein Homology CDS 2663953 2664297 . - 0 ID=cds2340;Parent=gene2419;Dbxref=Genbank:WP_011192541.1;Name=WP_011192541.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_011192541.1;transl_table=11 NC_010634.1 RefSeq gene 2664294 2665958 . - . ID=gene2420;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YPTS_RS12140;old_locus_tag=YPTS_2401 NC_010634.1 Protein Homology CDS 2664294 2665958 . - 0 ID=cds2341;Parent=gene2420;Dbxref=Genbank:WP_002211821.1;Name=WP_002211821.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_002211821.1;transl_table=11 NC_010634.1 RefSeq gene 2665955 2666860 . - . ID=gene2421;Name=YPTS_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12145;old_locus_tag=YPTS_2402 NC_010634.1 Protein Homology CDS 2665955 2666860 . - 0 ID=cds2342;Parent=gene2421;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11 NC_010634.1 RefSeq gene 2666857 2668860 . - . ID=gene2422;Name=YPTS_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12150;old_locus_tag=YPTS_2403 NC_010634.1 Protein Homology CDS 2666857 2668860 . - 0 ID=cds2343;Parent=gene2422;Dbxref=Genbank:WP_011192542.1;Name=WP_011192542.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_011192542.1;transl_table=11 NC_010634.1 RefSeq gene 2668857 2669840 . - . ID=gene2423;Name=YPTS_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12155;old_locus_tag=YPTS_2404 NC_010634.1 Protein Homology CDS 2668857 2669840 . - 0 ID=cds2344;Parent=gene2423;Dbxref=Genbank:WP_011192543.1;Name=WP_011192543.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_011192543.1;transl_table=11 NC_010634.1 RefSeq gene 2669827 2670981 . - . ID=gene2424;Name=YPTS_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12160;old_locus_tag=YPTS_2405 NC_010634.1 Protein Homology CDS 2669827 2670981 . - 0 ID=cds2345;Parent=gene2424;Dbxref=Genbank:WP_002211825.1;Name=WP_002211825.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_002211825.1;transl_table=11 NC_010634.1 RefSeq gene 2671331 2672089 . - . ID=gene2425;Name=YPTS_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12165;old_locus_tag=YPTS_2406 NC_010634.1 Protein Homology CDS 2671331 2672089 . - 0 ID=cds2346;Parent=gene2425;Dbxref=Genbank:WP_002211826.1;Name=WP_002211826.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_002211826.1;transl_table=11 NC_010634.1 RefSeq gene 2672114 2672668 . - . ID=gene2426;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YPTS_RS12170;old_locus_tag=YPTS_2407 NC_010634.1 Protein Homology CDS 2672114 2672668 . - 0 ID=cds2347;Parent=gene2426;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NC_010634.1 RefSeq gene 2672738 2673745 . - . ID=gene2427;Name=YPTS_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12175;old_locus_tag=YPTS_2408 NC_010634.1 Protein Homology CDS 2672738 2673745 . - 0 ID=cds2348;Parent=gene2427;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11 NC_010634.1 RefSeq gene 2673990 2674445 . - . ID=gene2428;Name=YPTS_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12180;old_locus_tag=YPTS_2409 NC_010634.1 Protein Homology CDS 2673990 2674445 . - 0 ID=cds2349;Parent=gene2428;Dbxref=Genbank:WP_011192544.1;Name=WP_011192544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192544.1;transl_table=11 NC_010634.1 RefSeq gene 2674779 2675075 . - . ID=gene2429;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YPTS_RS12185;old_locus_tag=YPTS_2410 NC_010634.1 Protein Homology CDS 2674779 2675075 . - 0 ID=cds2350;Parent=gene2429;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NC_010634.1 RefSeq gene 2675080 2677467 . - . ID=gene2430;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YPTS_RS12190;old_locus_tag=YPTS_2411 NC_010634.1 Protein Homology CDS 2675080 2677467 . - 0 ID=cds2351;Parent=gene2430;Dbxref=Genbank:WP_011192545.1;Name=WP_011192545.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011192545.1;transl_table=11 NC_010634.1 RefSeq gene 2677481 2678464 . - . ID=gene2431;Name=YPTS_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12195;old_locus_tag=YPTS_2412 NC_010634.1 Protein Homology CDS 2677481 2678464 . - 0 ID=cds2352;Parent=gene2431;Dbxref=Genbank:WP_011192546.1;Name=WP_011192546.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_011192546.1;transl_table=11 NC_010634.1 RefSeq gene 2678963 2679319 . - . ID=gene2432;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YPTS_RS12200;old_locus_tag=YPTS_2413 NC_010634.1 Protein Homology CDS 2678963 2679319 . - 0 ID=cds2353;Parent=gene2432;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NC_010634.1 RefSeq gene 2679357 2679554 . - . ID=gene2433;Name=YPTS_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12205;old_locus_tag=YPTS_2414 NC_010634.1 Protein Homology CDS 2679357 2679554 . - 0 ID=cds2354;Parent=gene2433;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NC_010634.1 RefSeq gene 2679651 2680001 . - . ID=gene2434;Name=YPTS_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12210;old_locus_tag=YPTS_2415 NC_010634.1 Protein Homology CDS 2679651 2680001 . - 0 ID=cds2355;Parent=gene2434;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11 NC_010634.1 RefSeq gene 2680206 2682134 . - . ID=gene2435;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YPTS_RS12215;old_locus_tag=YPTS_2416 NC_010634.1 Protein Homology CDS 2680206 2682134 . - 0 ID=cds2356;Parent=gene2435;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NC_010634.1 RefSeq gene 2682525 2682737 . + . ID=gene2436;Name=YPTS_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12220;old_locus_tag=YPTS_2417 NC_010634.1 Protein Homology CDS 2682525 2682737 . + 0 ID=cds2357;Parent=gene2436;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11 NC_010634.1 RefSeq gene 2683047 2683424 . + . ID=gene2437;Name=YPTS_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12225 NC_010634.1 Protein Homology CDS 2683047 2683424 . + 0 ID=cds2358;Parent=gene2437;Dbxref=Genbank:WP_011192547.1;Name=WP_011192547.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192547.1;transl_table=11 NC_010634.1 RefSeq gene 2683496 2683747 . - . ID=gene2438;Name=YPTS_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12230;old_locus_tag=YPTS_2418 NC_010634.1 Protein Homology CDS 2683496 2683747 . - 0 ID=cds2359;Parent=gene2438;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NC_010634.1 RefSeq gene 2684066 2684749 . + . ID=gene2439;Name=YPTS_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12235;old_locus_tag=YPTS_2419 NC_010634.1 Protein Homology CDS 2684066 2684749 . + 0 ID=cds2360;Parent=gene2439;Dbxref=Genbank:WP_002211840.1;Name=WP_002211840.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211840.1;transl_table=11 NC_010634.1 RefSeq gene 2684871 2685533 . - . ID=gene2440;Name=YPTS_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12240;old_locus_tag=YPTS_2420 NC_010634.1 Protein Homology CDS 2684871 2685533 . - 0 ID=cds2361;Parent=gene2440;Dbxref=Genbank:WP_002216686.1;Name=WP_002216686.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_002216686.1;transl_table=11 NC_010634.1 RefSeq gene 2685745 2686713 . + . ID=gene2441;Name=YPTS_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12245;old_locus_tag=YPTS_2421 NC_010634.1 Protein Homology CDS 2685745 2686713 . + 0 ID=cds2362;Parent=gene2441;Dbxref=Genbank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_002211842.1;transl_table=11 NC_010634.1 RefSeq gene 2686710 2687600 . + . ID=gene2442;Name=YPTS_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12250;old_locus_tag=YPTS_2422 NC_010634.1 Protein Homology CDS 2686710 2687600 . + 0 ID=cds2363;Parent=gene2442;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11 NC_010634.1 RefSeq gene 2687600 2688484 . + . ID=gene2443;Name=YPTS_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12255;old_locus_tag=YPTS_2423 NC_010634.1 Protein Homology CDS 2687600 2688484 . + 0 ID=cds2364;Parent=gene2443;Dbxref=Genbank:WP_011192548.1;Name=WP_011192548.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192548.1;transl_table=11 NC_010634.1 RefSeq gene 2688481 2689374 . + . ID=gene2444;Name=YPTS_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12260;old_locus_tag=YPTS_2424 NC_010634.1 Protein Homology CDS 2688481 2689374 . + 0 ID=cds2365;Parent=gene2444;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11 NC_010634.1 RefSeq gene 2689442 2689654 . + . ID=gene2445;Name=YPTS_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12265 NC_010634.1 Protein Homology CDS 2689442 2689654 . + 0 ID=cds2366;Parent=gene2445;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11 NC_010634.1 RefSeq gene 2689679 2690554 . + . ID=gene2446;Name=YPTS_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12270;old_locus_tag=YPTS_2425 NC_010634.1 Protein Homology CDS 2689679 2690554 . + 0 ID=cds2367;Parent=gene2446;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11 NC_010634.1 RefSeq gene 2690683 2691237 . - . ID=gene2447;Name=YPTS_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12275;old_locus_tag=YPTS_2427 NC_010634.1 Protein Homology CDS 2690683 2691237 . - 0 ID=cds2368;Parent=gene2447;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11 NC_010634.1 RefSeq gene 2691648 2692313 . + . ID=gene2448;Name=YPTS_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12280;old_locus_tag=YPTS_2428 NC_010634.1 Protein Homology CDS 2691648 2692313 . + 0 ID=cds2369;Parent=gene2448;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11 NC_010634.1 RefSeq gene 2692499 2692831 . - . ID=gene2449;Name=YPTS_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12285;old_locus_tag=YPTS_2429 NC_010634.1 Protein Homology CDS 2692499 2692831 . - 0 ID=cds2370;Parent=gene2449;Dbxref=Genbank:WP_011192549.1;Name=WP_011192549.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_011192549.1;transl_table=11 NC_010634.1 RefSeq gene 2693167 2694003 . + . ID=gene2450;Name=YPTS_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12290;old_locus_tag=YPTS_2430 NC_010634.1 Protein Homology CDS 2693167 2694003 . + 0 ID=cds2371;Parent=gene2450;Dbxref=Genbank:WP_012105015.1;Name=WP_012105015.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_012105015.1;transl_table=11 NC_010634.1 RefSeq gene 2694095 2694856 . + . ID=gene2451;Name=YPTS_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12295;old_locus_tag=YPTS_2431 NC_010634.1 Protein Homology CDS 2694095 2694856 . + 0 ID=cds2372;Parent=gene2451;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11 NC_010634.1 RefSeq gene 2695201 2696868 . + . ID=gene2452;Name=YPTS_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12300;old_locus_tag=YPTS_2432 NC_010634.1 Protein Homology CDS 2695201 2696868 . + 0 ID=cds2373;Parent=gene2452;Dbxref=Genbank:WP_011192550.1;Name=WP_011192550.1;gbkey=CDS;product=pectate disaccharide-lyase;protein_id=WP_011192550.1;transl_table=11 NC_010634.1 RefSeq gene 2696909 2697799 . + . ID=gene2453;Name=YPTS_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12305;old_locus_tag=YPTS_2433 NC_010634.1 Protein Homology CDS 2696909 2697799 . + 0 ID=cds2374;Parent=gene2453;Dbxref=Genbank:WP_002210832.1;Name=WP_002210832.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NC_010634.1 RefSeq gene 2697792 2698712 . + . ID=gene2454;Name=YPTS_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12310;old_locus_tag=YPTS_2434 NC_010634.1 Protein Homology CDS 2697792 2698712 . + 0 ID=cds2375;Parent=gene2454;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NC_010634.1 RefSeq gene 2698726 2699853 . + . ID=gene2455;Name=YPTS_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12315;old_locus_tag=YPTS_2435 NC_010634.1 Protein Homology CDS 2698726 2699853 . + 0 ID=cds2376;Parent=gene2455;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NC_010634.1 RefSeq gene 2699869 2701161 . + . ID=gene2456;Name=YPTS_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12320;old_locus_tag=YPTS_2436 NC_010634.1 Protein Homology CDS 2699869 2701161 . + 0 ID=cds2377;Parent=gene2456;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NC_010634.1 RefSeq gene 2701460 2702170 . + . ID=gene2457;Name=YPTS_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12325;old_locus_tag=YPTS_2437 NC_010634.1 Protein Homology CDS 2701460 2702170 . + 0 ID=cds2378;Parent=gene2457;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11 NC_010634.1 RefSeq gene 2702650 2703198 . + . ID=gene2458;Name=YPTS_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12330;old_locus_tag=YPTS_2438 NC_010634.1 Protein Homology CDS 2702650 2703198 . + 0 ID=cds2379;Parent=gene2458;Dbxref=Genbank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210837.1;transl_table=11 NC_010634.1 RefSeq gene 2703402 2704793 . + . ID=gene2459;Name=YPTS_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12335;old_locus_tag=YPTS_2439 NC_010634.1 Protein Homology CDS 2703402 2704793 . + 0 ID=cds2380;Parent=gene2459;Dbxref=Genbank:WP_002210838.1;Name=WP_002210838.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_002210838.1;transl_table=11 NC_010634.1 RefSeq gene 2705008 2705859 . - . ID=gene2460;Name=YPTS_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12340;old_locus_tag=YPTS_2440 NC_010634.1 Protein Homology CDS 2705008 2705859 . - 0 ID=cds2381;Parent=gene2460;Dbxref=Genbank:WP_011192551.1;Name=WP_011192551.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011192551.1;transl_table=11 NC_010634.1 RefSeq gene 2706234 2707025 . - . ID=gene2461;Name=YPTS_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12345;old_locus_tag=YPTS_2441 NC_010634.1 Protein Homology CDS 2706234 2707025 . - 0 ID=cds2382;Parent=gene2461;Dbxref=Genbank:WP_002210840.1;Name=WP_002210840.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002210840.1;transl_table=11 NC_010634.1 RefSeq gene 2707212 2708378 . - . ID=gene2462;Name=YPTS_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12350;old_locus_tag=YPTS_2442 NC_010634.1 Protein Homology CDS 2707212 2708378 . - 0 ID=cds2383;Parent=gene2462;Dbxref=Genbank:WP_011192552.1;Name=WP_011192552.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_011192552.1;transl_table=11 NC_010634.1 RefSeq gene 2708745 2710112 . + . ID=gene2463;Name=YPTS_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12355;old_locus_tag=YPTS_2443 NC_010634.1 Protein Homology CDS 2708745 2710112 . + 0 ID=cds2384;Parent=gene2463;Dbxref=Genbank:WP_011192553.1;Name=WP_011192553.1;gbkey=CDS;product=multidrug MFS transporter;protein_id=WP_011192553.1;transl_table=11 NC_010634.1 RefSeq gene 2710166 2710969 . - . ID=gene2464;Name=YPTS_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12360;old_locus_tag=YPTS_2444 NC_010634.1 Protein Homology CDS 2710166 2710969 . - 0 ID=cds2385;Parent=gene2464;Dbxref=Genbank:WP_011192554.1;Name=WP_011192554.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_011192554.1;transl_table=11 NC_010634.1 RefSeq gene 2710966 2712129 . - . ID=gene2465;Name=YPTS_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12365;old_locus_tag=YPTS_2445 NC_010634.1 Protein Homology CDS 2710966 2712129 . - 0 ID=cds2386;Parent=gene2465;Dbxref=Genbank:WP_012413757.1;Name=WP_012413757.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_012413757.1;transl_table=11 NC_010634.1 RefSeq gene 2712126 2714738 . - . ID=gene2466;Name=YPTS_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12370;old_locus_tag=YPTS_2446 NC_010634.1 Protein Homology CDS 2712126 2714738 . - 0 ID=cds2387;Parent=gene2466;Dbxref=Genbank:WP_011192555.1;Name=WP_011192555.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192555.1;transl_table=11 NC_010634.1 RefSeq gene 2714820 2715506 . - . ID=gene2467;Name=YPTS_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12375;old_locus_tag=YPTS_2447 NC_010634.1 Protein Homology CDS 2714820 2715506 . - 0 ID=cds2388;Parent=gene2467;Dbxref=Genbank:WP_002354110.1;Name=WP_002354110.1;gbkey=CDS;product=fimbrial assembly protein StbE;protein_id=WP_002354110.1;transl_table=11 NC_010634.1 RefSeq gene 2715803 2716345 . - . ID=gene2468;Name=YPTS_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12380;old_locus_tag=YPTS_2448 NC_010634.1 Protein Homology CDS 2715803 2716345 . - 0 ID=cds2389;Parent=gene2468;Dbxref=Genbank:WP_002210846.1;Name=WP_002210846.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002210846.1;transl_table=11 NC_010634.1 RefSeq gene 2717003 2717884 . - . ID=gene2469;Name=YPTS_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12385;old_locus_tag=YPTS_2450 NC_010634.1 Protein Homology CDS 2717003 2717884 . - 0 ID=cds2390;Parent=gene2469;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NC_010634.1 RefSeq gene 2718347 2720425 . - . ID=gene2470;Name=YPTS_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12390;old_locus_tag=YPTS_2451 NC_010634.1 Protein Homology CDS 2718347 2720425 . - 0 ID=cds2391;Parent=gene2470;Dbxref=Genbank:WP_011192556.1;Name=WP_011192556.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_011192556.1;transl_table=11 NC_010634.1 RefSeq gene 2720445 2721158 . - . ID=gene2471;Name=YPTS_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12395;old_locus_tag=YPTS_2452 NC_010634.1 Protein Homology CDS 2720445 2721158 . - 0 ID=cds2392;Parent=gene2471;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NC_010634.1 RefSeq gene 2721254 2721751 . - . ID=gene2472;Name=YPTS_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12400;old_locus_tag=YPTS_2453 NC_010634.1 Protein Homology CDS 2721254 2721751 . - 0 ID=cds2393;Parent=gene2472;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11 NC_010634.1 RefSeq gene 2721983 2723230 . + . ID=gene2473;Name=YPTS_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12405;old_locus_tag=YPTS_2454 NC_010634.1 Protein Homology CDS 2721983 2723230 . + 0 ID=cds2394;Parent=gene2473;Dbxref=Genbank:WP_012105007.1;Name=WP_012105007.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105007.1;transl_table=11 NC_010634.1 RefSeq gene 2723199 2725850 . + . ID=gene2474;Name=YPTS_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12410;old_locus_tag=YPTS_2455 NC_010634.1 Protein Homology CDS 2723199 2725850 . + 0 ID=cds2395;Parent=gene2474;Dbxref=Genbank:WP_012413758.1;Name=WP_012413758.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413758.1;transl_table=11 NC_010634.1 RefSeq gene 2726333 2726887 . + . ID=gene2475;Name=YPTS_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12415;old_locus_tag=YPTS_2456 NC_010634.1 Protein Homology CDS 2726333 2726887 . + 0 ID=cds2396;Parent=gene2475;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11 NC_010634.1 RefSeq gene 2726932 2727423 . + . ID=gene2476;Name=YPTS_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12420;old_locus_tag=YPTS_2457 NC_010634.1 Protein Homology CDS 2726932 2727423 . + 0 ID=cds2397;Parent=gene2476;Dbxref=Genbank:WP_041175592.1;Name=WP_041175592.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_041175592.1;transl_table=11 NC_010634.1 RefSeq gene 2727444 2728001 . + . ID=gene2477;Name=YPTS_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12425;old_locus_tag=YPTS_2458 NC_010634.1 Protein Homology CDS 2727444 2728001 . + 0 ID=cds2398;Parent=gene2477;Dbxref=Genbank:WP_002216611.1;Name=WP_002216611.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002216611.1;transl_table=11 NC_010634.1 RefSeq gene 2728032 2728784 . + . ID=gene2478;Name=YPTS_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12430;old_locus_tag=YPTS_2459 NC_010634.1 Protein Homology CDS 2728032 2728784 . + 0 ID=cds2399;Parent=gene2478;Dbxref=Genbank:WP_002210856.1;Name=WP_002210856.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210856.1;transl_table=11 NC_010634.1 RefSeq gene 2728870 2731317 . + . ID=gene2479;Name=YPTS_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12435;old_locus_tag=YPTS_2460 NC_010634.1 Protein Homology CDS 2728870 2731317 . + 0 ID=cds2400;Parent=gene2479;Dbxref=Genbank:WP_012413760.1;Name=WP_012413760.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413760.1;transl_table=11 NC_010634.1 RefSeq gene 2731481 2732470 . + . ID=gene2480;Name=YPTS_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12440;old_locus_tag=YPTS_2461 NC_010634.1 Protein Homology CDS 2731481 2732470 . + 0 ID=cds2401;Parent=gene2480;Dbxref=Genbank:WP_011192561.1;Name=WP_011192561.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_011192561.1;transl_table=11 NC_010634.1 RefSeq gene 2732678 2732917 . + . ID=gene2481;Name=YPTS_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12445;old_locus_tag=YPTS_2462 NC_010634.1 Protein Homology CDS 2732678 2732917 . + 0 ID=cds2402;Parent=gene2481;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11 NC_010634.1 RefSeq gene 2733027 2733416 . - . ID=gene2482;Name=YPTS_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12450;old_locus_tag=YPTS_2463 NC_010634.1 Protein Homology CDS 2733027 2733416 . - 0 ID=cds2403;Parent=gene2482;Dbxref=Genbank:WP_002215943.1;Name=WP_002215943.1;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002215943.1;transl_table=11 NC_010634.1 RefSeq gene 2734208 2734441 . - . ID=gene2483;Name=YPTS_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12455;old_locus_tag=YPTS_2465 NC_010634.1 Protein Homology CDS 2734208 2734441 . - 0 ID=cds2404;Parent=gene2483;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11 NC_010634.1 RefSeq gene 2734596 2735852 . - . ID=gene2484;Name=YPTS_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12460;old_locus_tag=YPTS_2466 NC_010634.1 Protein Homology CDS 2734596 2735852 . - 0 ID=cds2405;Parent=gene2484;Dbxref=Genbank:WP_012413761.1;Name=WP_012413761.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413761.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2736052 2736158 . + . ID=id175;gbkey=repeat_region NC_010634.1 RefSeq gene 2736245 2736493 . - . ID=gene2485;Name=YPTS_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12465;old_locus_tag=YPTS_2467 NC_010634.1 Protein Homology CDS 2736245 2736493 . - 0 ID=cds2406;Parent=gene2485;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NC_010634.1 RefSeq gene 2737057 2737251 . + . ID=gene2486;Name=YPTS_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12470;old_locus_tag=YPTS_2469 NC_010634.1 Protein Homology CDS 2737057 2737251 . + 0 ID=cds2407;Parent=gene2486;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NC_010634.1 RefSeq gene 2737653 2738882 . + . ID=gene2487;Name=YPTS_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12475;old_locus_tag=YPTS_2470 NC_010634.1 Protein Homology CDS 2737653 2738882 . + 0 ID=cds2408;Parent=gene2487;Dbxref=Genbank:WP_012413762.1;Name=WP_012413762.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_012413762.1;transl_table=11 NC_010634.1 RefSeq gene 2739500 2740453 . - . ID=gene2488;Name=YPTS_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12480;old_locus_tag=YPTS_2472 NC_010634.1 Protein Homology CDS 2739500 2740453 . - 0 ID=cds2409;Parent=gene2488;Dbxref=Genbank:WP_012413764.1;Name=WP_012413764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413764.1;transl_table=11 NC_010634.1 RefSeq gene 2740553 2743195 . - . ID=gene2489;Name=YPTS_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12485;old_locus_tag=YPTS_2473 NC_010634.1 Protein Homology CDS 2740553 2743195 . - 0 ID=cds2410;Parent=gene2489;Dbxref=Genbank:WP_012413765.1;Name=WP_012413765.1;gbkey=CDS;product=collagen-binding protein;protein_id=WP_012413765.1;transl_table=11 NC_010634.1 RefSeq gene 2743552 2744316 . - . ID=gene2490;Name=YPTS_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12490;old_locus_tag=YPTS_2474 NC_010634.1 Protein Homology CDS 2743552 2744316 . - 0 ID=cds2411;Parent=gene2490;Dbxref=Genbank:WP_011192565.1;Name=WP_011192565.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011192565.1;transl_table=11 NC_010634.1 RefSeq gene 2744440 2744559 . + . ID=gene2491;Name=YPTS_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12495 NC_010634.1 Protein Homology CDS 2744440 2744559 . + 0 ID=cds2412;Parent=gene2491;Dbxref=Genbank:WP_012105001.1;Name=WP_012105001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105001.1;transl_table=11 NC_010634.1 RefSeq gene 2744873 2745517 . - . ID=gene2492;Name=YPTS_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12500;old_locus_tag=YPTS_2475 NC_010634.1 Protein Homology CDS 2744873 2745517 . - 0 ID=cds2413;Parent=gene2492;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NC_010634.1 RefSeq gene 2745527 2745916 . - . ID=gene2493;Name=YPTS_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12505;old_locus_tag=YPTS_2476 NC_010634.1 Protein Homology CDS 2745527 2745916 . - 0 ID=cds2414;Parent=gene2493;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11 NC_010634.1 RefSeq gene 2746017 2747066 . - . ID=gene2494;Name=YPTS_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12510;old_locus_tag=YPTS_2477 NC_010634.1 Protein Homology CDS 2746017 2747066 . - 0 ID=cds2415;Parent=gene2494;Dbxref=Genbank:WP_002210874.1;Name=WP_002210874.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_002210874.1;transl_table=11 NC_010634.1 RefSeq gene 2747066 2747938 . - . ID=gene2495;Name=YPTS_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12515;old_locus_tag=YPTS_2478 NC_010634.1 Protein Homology CDS 2747066 2747938 . - 0 ID=cds2416;Parent=gene2495;Dbxref=Genbank:WP_002214065.1;Name=WP_002214065.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_002214065.1;transl_table=11 NC_010634.1 RefSeq gene 2748111 2749721 . - . ID=gene2496;Name=YPTS_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12520;old_locus_tag=YPTS_2479 NC_010634.1 Protein Homology CDS 2748111 2749721 . - 0 ID=cds2417;Parent=gene2496;Dbxref=Genbank:WP_012413766.1;Name=WP_012413766.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_012413766.1;transl_table=11 NC_010634.1 RefSeq gene 2749905 2751578 . - . ID=gene2497;Name=YPTS_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12525;old_locus_tag=YPTS_2480 NC_010634.1 Protein Homology CDS 2749905 2751578 . - 0 ID=cds2418;Parent=gene2497;Dbxref=Genbank:WP_011192568.1;Name=WP_011192568.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_011192568.1;transl_table=11 NC_010634.1 RefSeq gene 2751819 2752520 . - . ID=gene2498;Name=YPTS_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12530;old_locus_tag=YPTS_2481 NC_010634.1 Protein Homology CDS 2751819 2752520 . - 0 ID=cds2419;Parent=gene2498;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11 NC_010634.1 RefSeq gene 2752589 2755453 . - . ID=gene2499;Name=YPTS_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12535;old_locus_tag=YPTS_2482 NC_010634.1 Protein Homology CDS 2752589 2755453 . - 0 ID=cds2420;Parent=gene2499;Dbxref=Genbank:WP_012413767.1;Name=WP_012413767.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413767.1;transl_table=11 NC_010634.1 RefSeq gene 2756073 2756570 . - . ID=gene2500;Name=YPTS_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12540;old_locus_tag=YPTS_2483 NC_010634.1 Protein Homology CDS 2756073 2756570 . - 0 ID=cds2421;Parent=gene2500;Dbxref=Genbank:WP_011192570.1;Name=WP_011192570.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_011192570.1;transl_table=11 NC_010634.1 RefSeq gene 2756733 2758898 . - . ID=gene2501;Name=YPTS_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12545;old_locus_tag=YPTS_2484 NC_010634.1 Protein Homology CDS 2756733 2758898 . - 0 ID=cds2422;Parent=gene2501;Dbxref=Genbank:WP_041175460.1;Name=WP_041175460.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_041175460.1;transl_table=11 NC_010634.1 RefSeq gene 2759386 2760234 . - . ID=gene2502;Name=YPTS_RS12550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS12550;partial=true;pseudo=true;start_range=.,2759386 NC_010634.1 Protein Homology CDS 2759386 2760234 . - 0 ID=cds2423;Parent=gene2502;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2759386;transl_table=11 NC_010634.1 RefSeq gene 2760231 2761118 . - . ID=gene2503;Name=YPTS_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12555;old_locus_tag=YPTS_2486 NC_010634.1 Protein Homology CDS 2760231 2761118 . - 0 ID=cds2424;Parent=gene2503;Dbxref=Genbank:WP_011192573.1;Name=WP_011192573.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_011192573.1;transl_table=11 NC_010634.1 RefSeq gene 2761323 2761904 . - . ID=gene2504;Name=YPTS_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12560;old_locus_tag=YPTS_2487 NC_010634.1 Protein Homology CDS 2761323 2761904 . - 0 ID=cds2425;Parent=gene2504;Dbxref=Genbank:WP_002210889.1;Name=WP_002210889.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210889.1;transl_table=11 NC_010634.1 RefSeq gene 2761908 2762258 . - . ID=gene2505;Name=YPTS_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12565;old_locus_tag=YPTS_2488 NC_010634.1 Protein Homology CDS 2761908 2762258 . - 0 ID=cds2426;Parent=gene2505;Dbxref=Genbank:WP_011192574.1;Name=WP_011192574.1;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;gbkey=CDS;product=flagellar transcriptional regulator FlhD;protein_id=WP_011192574.1;transl_table=11 NC_010634.1 RefSeq gene 2763446 2766145 . - . ID=gene2506;Name=YPTS_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12570;old_locus_tag=YPTS_2489 NC_010634.1 Protein Homology CDS 2763446 2766145 . - 0 ID=cds2427;Parent=gene2506;Dbxref=Genbank:WP_011192575.1;Name=WP_011192575.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_011192575.1;transl_table=11 NC_010634.1 RefSeq gene 2766538 2767236 . - . ID=gene2507;Name=YPTS_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12575;old_locus_tag=YPTS_2490 NC_010634.1 Protein Homology CDS 2766538 2767236 . - 0 ID=cds2428;Parent=gene2507;Dbxref=Genbank:WP_011192576.1;Name=WP_011192576.1;gbkey=CDS;product=magnesium transporter;protein_id=WP_011192576.1;transl_table=11 NC_010634.1 RefSeq gene 2767588 2767764 . - . ID=gene2508;Name=YPTS_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12580 NC_010634.1 Protein Homology CDS 2767588 2767764 . - 0 ID=cds2429;Parent=gene2508;Dbxref=Genbank:WP_032466946.1;Name=WP_032466946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466946.1;transl_table=11 NC_010634.1 RefSeq gene 2768375 2770081 . + . ID=gene2509;Name=YPTS_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12585;old_locus_tag=YPTS_2491 NC_010634.1 Protein Homology CDS 2768375 2770081 . + 0 ID=cds2430;Parent=gene2509;Dbxref=Genbank:WP_032466679.1;Name=WP_032466679.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_032466679.1;transl_table=11 NC_010634.1 RefSeq gene 2770264 2770455 . - . ID=gene2510;Name=YPTS_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12590;old_locus_tag=YPTS_2492 NC_010634.1 Protein Homology CDS 2770264 2770455 . - 0 ID=cds2431;Parent=gene2510;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NC_010634.1 cmsearch region 2770621 2771063 . - . ID=id176;Note=cspA;gbkey=misc_feature NC_010634.1 RefSeq gene 2770670 2770882 . - . ID=gene2511;Name=YPTS_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12595;old_locus_tag=YPTS_2493 NC_010634.1 Protein Homology CDS 2770670 2770882 . - 0 ID=cds2432;Parent=gene2511;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11 NC_010634.1 RefSeq gene 2771423 2774623 . + . ID=gene2512;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YPTS_RS12600;old_locus_tag=YPTS_2494 NC_010634.1 Protein Homology CDS 2771423 2774623 . + 0 ID=cds2433;Parent=gene2512;Dbxref=Genbank:WP_011192578.1;Name=WP_011192578.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_011192578.1;transl_table=11 NC_010634.1 RefSeq gene 2775030 2776040 . + . ID=gene2513;Name=YPTS_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12605;old_locus_tag=YPTS_2496 NC_010634.1 Protein Homology CDS 2775030 2776040 . + 0 ID=cds2434;Parent=gene2513;Dbxref=Genbank:WP_011192579.1;Name=WP_011192579.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_011192579.1;transl_table=11 NC_010634.1 RefSeq gene 2776323 2776856 . + . ID=gene2514;Name=YPTS_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12610;old_locus_tag=YPTS_2498 NC_010634.1 Protein Homology CDS 2776323 2776856 . + 0 ID=cds2435;Parent=gene2514;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11 NC_010634.1 RefSeq gene 2777366 2777815 . + . ID=gene2515;Name=YPTS_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12615;old_locus_tag=YPTS_2500 NC_010634.1 Protein Homology CDS 2777366 2777815 . + 0 ID=cds2436;Parent=gene2515;Dbxref=Genbank:WP_002210900.1;Name=WP_002210900.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NC_010634.1 RefSeq gene 2777907 2778806 . + . ID=gene2516;Name=YPTS_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12620;old_locus_tag=YPTS_2501 NC_010634.1 Protein Homology CDS 2777907 2778806 . + 0 ID=cds2437;Parent=gene2516;Dbxref=Genbank:WP_012413770.1;Name=WP_012413770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413770.1;transl_table=11 NC_010634.1 RefSeq gene 2779109 2779312 . + . ID=gene2517;Name=YPTS_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12625;old_locus_tag=YPTS_2502 NC_010634.1 Protein Homology CDS 2779109 2779312 . + 0 ID=cds2438;Parent=gene2517;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11 NC_010634.1 RefSeq gene 2779606 2780931 . - . ID=gene2518;Name=YPTS_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12630;old_locus_tag=YPTS_2503 NC_010634.1 Protein Homology CDS 2779606 2780931 . - 0 ID=cds2439;Parent=gene2518;Dbxref=Genbank:WP_011192581.1;Name=WP_011192581.1;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=WP_011192581.1;transl_table=11 NC_010634.1 RefSeq gene 2781238 2781405 . - . ID=gene2519;Name=YPTS_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12635 NC_010634.1 Protein Homology CDS 2781238 2781405 . - 0 ID=cds2440;Parent=gene2519;Dbxref=Genbank:WP_032466947.1;Name=WP_032466947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466947.1;transl_table=11 NC_010634.1 RefSeq gene 2781463 2781846 . - . ID=gene2520;Name=YPTS_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12640;old_locus_tag=YPTS_2505 NC_010634.1 Protein Homology CDS 2781463 2781846 . - 0 ID=cds2441;Parent=gene2520;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NC_010634.1 RefSeq gene 2782006 2782863 . + . ID=gene2521;Name=YPTS_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12645;old_locus_tag=YPTS_2506 NC_010634.1 Protein Homology CDS 2782006 2782863 . + 0 ID=cds2442;Parent=gene2521;Dbxref=Genbank:WP_011192582.1;Name=WP_011192582.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_011192582.1;transl_table=11 NC_010634.1 RefSeq gene 2783784 2785364 . + . ID=gene2522;Name=YPTS_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12650;old_locus_tag=YPTS_2507 NC_010634.1 Protein Homology CDS 2783784 2785364 . + 0 ID=cds2443;Parent=gene2522;Dbxref=Genbank:WP_011192583.1;Name=WP_011192583.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_011192583.1;transl_table=11 NC_010634.1 RefSeq gene 2785484 2785744 . + . ID=gene2523;Name=YPTS_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12655;old_locus_tag=YPTS_2508 NC_010634.1 Protein Homology CDS 2785484 2785744 . + 0 ID=cds2444;Parent=gene2523;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NC_010634.1 RefSeq gene 2785999 2787042 . + . ID=gene2524;Name=YPTS_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12660;old_locus_tag=YPTS_2509 NC_010634.1 Protein Homology CDS 2785999 2787042 . + 0 ID=cds2445;Parent=gene2524;Dbxref=Genbank:WP_011192584.1;Name=WP_011192584.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_011192584.1;transl_table=11 NC_010634.1 RefSeq gene 2787176 2788429 . - . ID=gene2525;Name=YPTS_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12665;old_locus_tag=YPTS_2510 NC_010634.1 Protein Homology CDS 2787176 2788429 . - 0 ID=cds2446;Parent=gene2525;Dbxref=Genbank:WP_002210910.1;Name=WP_002210910.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NC_010634.1 RefSeq gene 2788560 2789186 . + . ID=gene2526;Name=YPTS_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12670;old_locus_tag=YPTS_2511 NC_010634.1 Protein Homology CDS 2788560 2789186 . + 0 ID=cds2447;Parent=gene2526;Dbxref=Genbank:WP_002218214.1;Name=WP_002218214.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_002218214.1;transl_table=11 NC_010634.1 RefSeq gene 2789179 2789625 . + . ID=gene2527;Name=YPTS_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12675;old_locus_tag=YPTS_2512 NC_010634.1 Protein Homology CDS 2789179 2789625 . + 0 ID=cds2448;Parent=gene2527;Dbxref=Genbank:WP_011192585.1;Name=WP_011192585.1;gbkey=CDS;product=phosphatase;protein_id=WP_011192585.1;transl_table=11 NC_010634.1 RefSeq gene 2789812 2790927 . + . ID=gene2528;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=YPTS_RS12680;old_locus_tag=YPTS_2513 NC_010634.1 Protein Homology CDS 2789812 2790927 . + 0 ID=cds2449;Parent=gene2528;Dbxref=Genbank:WP_002210913.1;Name=WP_002210913.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_002210913.1;transl_table=11 NC_010634.1 RefSeq gene 2790985 2791611 . + . ID=gene2529;Name=YPTS_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12685;old_locus_tag=YPTS_2514 NC_010634.1 Protein Homology CDS 2790985 2791611 . + 0 ID=cds2450;Parent=gene2529;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11 NC_010634.1 RefSeq gene 2791672 2793042 . + . ID=gene2530;Name=YPTS_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12690;old_locus_tag=YPTS_2515 NC_010634.1 Protein Homology CDS 2791672 2793042 . + 0 ID=cds2451;Parent=gene2530;Dbxref=Genbank:WP_002230790.1;Name=WP_002230790.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002230790.1;transl_table=11 NC_010634.1 RefSeq gene 2793230 2793853 . + . ID=gene2531;Name=YPTS_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12695;old_locus_tag=YPTS_2517 NC_010634.1 Protein Homology CDS 2793230 2793853 . + 0 ID=cds2452;Parent=gene2531;Dbxref=Genbank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210916.1;transl_table=11 NC_010634.1 RefSeq gene 2794064 2794735 . + . ID=gene2532;Name=YPTS_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12700;old_locus_tag=YPTS_2518 NC_010634.1 Protein Homology CDS 2794064 2794735 . + 0 ID=cds2453;Parent=gene2532;Dbxref=Genbank:WP_002230788.1;Name=WP_002230788.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002230788.1;transl_table=11 NC_010634.1 RefSeq gene 2794741 2796195 . + . ID=gene2533;Name=YPTS_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12705;old_locus_tag=YPTS_2519 NC_010634.1 Protein Homology CDS 2794741 2796195 . + 0 ID=cds2454;Parent=gene2533;Dbxref=Genbank:WP_002210918.1;Name=WP_002210918.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_002210918.1;transl_table=11 NC_010634.1 RefSeq gene 2796279 2797400 . + . ID=gene2534;Name=YPTS_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12710;old_locus_tag=YPTS_2520 NC_010634.1 Protein Homology CDS 2796279 2797400 . + 0 ID=cds2455;Parent=gene2534;Dbxref=Genbank:WP_002210919.1;Name=WP_002210919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210919.1;transl_table=11 NC_010634.1 RefSeq gene 2797633 2798868 . - . ID=gene2535;Name=YPTS_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12715;old_locus_tag=YPTS_2521 NC_010634.1 Protein Homology CDS 2797633 2798868 . - 0 ID=cds2456;Parent=gene2535;Dbxref=Genbank:WP_002210920.1;Name=WP_002210920.1;gbkey=CDS;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NC_010634.1 RefSeq gene 2799198 2800034 . - . ID=gene2536;Name=YPTS_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12720;old_locus_tag=YPTS_2522 NC_010634.1 Protein Homology CDS 2799198 2800034 . - 0 ID=cds2457;Parent=gene2536;Dbxref=Genbank:WP_002210921.1;Name=WP_002210921.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11 NC_010634.1 RefSeq gene 2800083 2800997 . - . ID=gene2537;Name=YPTS_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12725;old_locus_tag=YPTS_2523 NC_010634.1 Protein Homology CDS 2800083 2800997 . - 0 ID=cds2458;Parent=gene2537;Dbxref=Genbank:WP_011192586.1;Name=WP_011192586.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_011192586.1;transl_table=11 NC_010634.1 RefSeq gene 2801016 2802263 . - . ID=gene2538;Name=YPTS_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12730;old_locus_tag=YPTS_2524 NC_010634.1 Protein Homology CDS 2801016 2802263 . - 0 ID=cds2459;Parent=gene2538;Dbxref=Genbank:WP_011192587.1;Name=WP_011192587.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_011192587.1;transl_table=11 NC_010634.1 RefSeq gene 2802263 2802967 . - . ID=gene2539;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YPTS_RS12735;old_locus_tag=YPTS_2525 NC_010634.1 Protein Homology CDS 2802263 2802967 . - 0 ID=cds2460;Parent=gene2539;Dbxref=Genbank:WP_011192588.1;Name=WP_011192588.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_011192588.1;transl_table=11 NC_010634.1 RefSeq gene 2802960 2804162 . - . ID=gene2540;Name=YPTS_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12740;old_locus_tag=YPTS_2526 NC_010634.1 Protein Homology CDS 2802960 2804162 . - 0 ID=cds2461;Parent=gene2540;Dbxref=Genbank:WP_011192589.1;Name=WP_011192589.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_011192589.1;transl_table=11 NC_010634.1 RefSeq gene 2804432 2807878 . + . ID=gene2541;Name=YPTS_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12745;old_locus_tag=YPTS_2527 NC_010634.1 Protein Homology CDS 2804432 2807878 . + 0 ID=cds2462;Parent=gene2541;Dbxref=Genbank:WP_011192590.1;Name=WP_011192590.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_011192590.1;transl_table=11 NC_010634.1 RefSeq gene 2808117 2808656 . - . ID=gene2542;Name=YPTS_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12750;old_locus_tag=YPTS_2528 NC_010634.1 Protein Homology CDS 2808117 2808656 . - 0 ID=cds2463;Parent=gene2542;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11 NC_010634.1 RefSeq gene 2808967 2809380 . - . ID=gene2543;Name=YPTS_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12755;old_locus_tag=YPTS_2529 NC_010634.1 Protein Homology CDS 2808967 2809380 . - 0 ID=cds2464;Parent=gene2543;Dbxref=Genbank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NC_010634.1 RefSeq gene 2809388 2810092 . - . ID=gene2544;Name=YPTS_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12760;old_locus_tag=YPTS_2530 NC_010634.1 Protein Homology CDS 2809388 2810092 . - 0 ID=cds2465;Parent=gene2544;Dbxref=Genbank:WP_011192591.1;Name=WP_011192591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192591.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2810394 2810535 . + . ID=id177;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 2810589 2810792 . + . ID=id178;gbkey=repeat_region NC_010634.1 RefSeq gene 2810815 2812119 . - . ID=gene2545;Name=YPTS_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12765;old_locus_tag=YPTS_2531 NC_010634.1 Protein Homology CDS 2810815 2812119 . - 0 ID=cds2466;Parent=gene2545;Dbxref=Genbank:WP_002213097.1;Name=WP_002213097.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_002213097.1;transl_table=11 NC_010634.1 RefSeq gene 2812493 2813035 . - . ID=gene2546;Name=YPTS_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12770;old_locus_tag=YPTS_2532 NC_010634.1 Protein Homology CDS 2812493 2813035 . - 0 ID=cds2467;Parent=gene2546;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11 NC_010634.1 RefSeq gene 2813163 2814182 . - . ID=gene2547;Name=YPTS_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12775;old_locus_tag=YPTS_2533 NC_010634.1 Protein Homology CDS 2813163 2814182 . - 0 ID=cds2468;Parent=gene2547;Dbxref=Genbank:WP_032466495.1;Name=WP_032466495.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_032466495.1;transl_table=11 NC_010634.1 RefSeq gene 2814265 2815131 . - . ID=gene2548;Name=YPTS_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12780;old_locus_tag=YPTS_2534 NC_010634.1 Protein Homology CDS 2814265 2815131 . - 0 ID=cds2469;Parent=gene2548;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NC_010634.1 RefSeq gene 2815112 2815687 . - . ID=gene2549;Name=YPTS_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12785;old_locus_tag=YPTS_2535 NC_010634.1 Protein Homology CDS 2815112 2815687 . - 0 ID=cds2470;Parent=gene2549;Dbxref=Genbank:WP_011192593.1;Name=WP_011192593.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_011192593.1;transl_table=11 NC_010634.1 RefSeq gene 2815728 2816117 . - . ID=gene2550;Name=YPTS_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12790;old_locus_tag=YPTS_2536 NC_010634.1 Protein Homology CDS 2815728 2816117 . - 0 ID=cds2471;Parent=gene2550;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11 NC_010634.1 RefSeq gene 2816152 2816505 . - . ID=gene2551;Name=YPTS_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12795;old_locus_tag=YPTS_2537 NC_010634.1 Protein Homology CDS 2816152 2816505 . - 0 ID=cds2472;Parent=gene2551;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NC_010634.1 RefSeq gene 2816679 2817497 . - . ID=gene2552;Name=YPTS_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12800;old_locus_tag=YPTS_2538 NC_010634.1 Protein Homology CDS 2816679 2817497 . - 0 ID=cds2473;Parent=gene2552;Dbxref=Genbank:WP_002215853.1;Name=WP_002215853.1;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NC_010634.1 RefSeq gene 2817657 2817923 . + . ID=gene2553;Name=YPTS_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12805 NC_010634.1 GeneMarkS+ CDS 2817657 2817923 . + 0 ID=cds2474;Parent=gene2553;Dbxref=Genbank:WP_011192594.1;Name=WP_011192594.1;gbkey=CDS;product=phage replication protein;protein_id=WP_011192594.1;transl_table=11 NC_010634.1 RefSeq gene 2818395 2818580 . + . ID=gene2554;Name=YPTS_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12810;old_locus_tag=YPTS_2540 NC_010634.1 Protein Homology CDS 2818395 2818580 . + 0 ID=cds2475;Parent=gene2554;Dbxref=Genbank:WP_011192595.1;Name=WP_011192595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192595.1;transl_table=11 NC_010634.1 RefSeq gene 2818700 2820457 . - . ID=gene2555;Name=YPTS_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12815;old_locus_tag=YPTS_2541 NC_010634.1 Protein Homology CDS 2818700 2820457 . - 0 ID=cds2476;Parent=gene2555;Dbxref=Genbank:WP_012413771.1;Name=WP_012413771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413771.1;transl_table=11 NC_010634.1 RefSeq gene 2820454 2820933 . - . ID=gene2556;Name=YPTS_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12820;old_locus_tag=YPTS_2542 NC_010634.1 Protein Homology CDS 2820454 2820933 . - 0 ID=cds2477;Parent=gene2556;Dbxref=Genbank:WP_012413772.1;Name=WP_012413772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413772.1;transl_table=11 NC_010634.1 RefSeq gene 2820930 2822102 . - . ID=gene2557;Name=YPTS_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12825;old_locus_tag=YPTS_2543 NC_010634.1 Protein Homology CDS 2820930 2822102 . - 0 ID=cds2478;Parent=gene2557;Dbxref=Genbank:WP_012413773.1;Name=WP_012413773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413773.1;transl_table=11 NC_010634.1 RefSeq gene 2822358 2822612 . + . ID=gene2558;Name=YPTS_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12830;old_locus_tag=YPTS_2544 NC_010634.1 GeneMarkS+ CDS 2822358 2822612 . + 0 ID=cds2479;Parent=gene2558;Dbxref=Genbank:WP_012413774.1;Name=WP_012413774.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413774.1;transl_table=11 NC_010634.1 RefSeq gene 2822622 2823095 . - . ID=gene2559;Name=YPTS_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12835;old_locus_tag=YPTS_2545 NC_010634.1 Protein Homology CDS 2822622 2823095 . - 0 ID=cds2480;Parent=gene2559;Dbxref=Genbank:WP_011192599.1;Name=WP_011192599.1;gbkey=CDS;product=phage capsid portal protein;protein_id=WP_011192599.1;transl_table=11 NC_010634.1 RefSeq gene 2823178 2823363 . - . ID=gene2560;Name=YPTS_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21640 NC_010634.1 Protein Homology CDS 2823178 2823363 . - 0 ID=cds2481;Parent=gene2560;Dbxref=Genbank:WP_024062939.1;Name=WP_024062939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024062939.1;transl_table=11 NC_010634.1 RefSeq gene 2823720 2824232 . + . ID=gene2561;Name=YPTS_RS12845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS12845;pseudo=true NC_010634.1 Protein Homology CDS 2823720 2824232 . + 0 ID=cds2482;Parent=gene2561;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2823936..2823938%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 2824785 2826218 . - . ID=gene2562;Name=YPTS_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12850;old_locus_tag=YPTS_2551 NC_010634.1 Protein Homology CDS 2824785 2826218 . - 0 ID=cds2483;Parent=gene2562;Dbxref=Genbank:WP_012413778.1;Name=WP_012413778.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIBC;protein_id=WP_012413778.1;transl_table=11 NC_010634.1 RefSeq gene 2826524 2827333 . - . ID=gene2563;Name=YPTS_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12855;old_locus_tag=YPTS_2552 NC_010634.1 Protein Homology CDS 2826524 2827333 . - 0 ID=cds2484;Parent=gene2563;Dbxref=Genbank:WP_002213084.1;Name=WP_002213084.1;gbkey=CDS;product=DNAse;protein_id=WP_002213084.1;transl_table=11 NC_010634.1 RefSeq gene 2827348 2828370 . - . ID=gene2564;Name=YPTS_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12860;old_locus_tag=YPTS_2553 NC_010634.1 Protein Homology CDS 2827348 2828370 . - 0 ID=cds2485;Parent=gene2564;Dbxref=Genbank:WP_011192603.1;Name=WP_011192603.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_011192603.1;transl_table=11 NC_010634.1 RefSeq gene 2828370 2829008 . - . ID=gene2565;Name=YPTS_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12865;old_locus_tag=YPTS_2554 NC_010634.1 Protein Homology CDS 2828370 2829008 . - 0 ID=cds2486;Parent=gene2565;Dbxref=Genbank:WP_011192604.1;Name=WP_011192604.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_011192604.1;transl_table=11 NC_010634.1 RefSeq gene 2828998 2830023 . - . ID=gene2566;Name=YPTS_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12870;old_locus_tag=YPTS_2555 NC_010634.1 Protein Homology CDS 2828998 2830023 . - 0 ID=cds2487;Parent=gene2566;Dbxref=Genbank:WP_011192605.1;Name=WP_011192605.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_011192605.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2830106 2830279 . + . ID=id179;gbkey=repeat_region NC_010634.1 RefSeq gene 2830312 2831118 . - . ID=gene2567;Name=YPTS_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12875;old_locus_tag=YPTS_2556 NC_010634.1 Protein Homology CDS 2830312 2831118 . - 0 ID=cds2488;Parent=gene2567;Dbxref=Genbank:WP_011192606.1;Name=WP_011192606.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_011192606.1;transl_table=11 NC_010634.1 RefSeq gene 2831481 2832686 . - . ID=gene2568;Name=YPTS_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12880;old_locus_tag=YPTS_2557 NC_010634.1 Protein Homology CDS 2831481 2832686 . - 0 ID=cds2489;Parent=gene2568;Dbxref=Genbank:WP_002354075.1;Name=WP_002354075.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002354075.1;transl_table=11 NC_010634.1 RefSeq gene 2832817 2833053 . - . ID=gene2569;Name=YPTS_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12885;old_locus_tag=YPTS_2558 NC_010634.1 Protein Homology CDS 2832817 2833053 . - 0 ID=cds2490;Parent=gene2569;Dbxref=Genbank:WP_002220787.1;Name=WP_002220787.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NC_010634.1 RefSeq gene 2833207 2833941 . - . ID=gene2570;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YPTS_RS12890;old_locus_tag=YPTS_2559 NC_010634.1 Protein Homology CDS 2833207 2833941 . - 0 ID=cds2491;Parent=gene2570;Dbxref=Genbank:WP_002210935.1;Name=WP_002210935.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_002210935.1;transl_table=11 NC_010634.1 RefSeq gene 2833955 2834884 . - . ID=gene2571;Name=YPTS_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12895;old_locus_tag=YPTS_2560 NC_010634.1 Protein Homology CDS 2833955 2834884 . - 0 ID=cds2492;Parent=gene2571;Dbxref=Genbank:WP_002210934.1;Name=WP_002210934.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_002210934.1;transl_table=11 NC_010634.1 RefSeq gene 2834922 2835872 . - . ID=gene2572;Name=YPTS_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12900;old_locus_tag=YPTS_2561 NC_010634.1 Protein Homology CDS 2834922 2835872 . - 0 ID=cds2493;Parent=gene2572;Dbxref=Genbank:WP_002210933.1;Name=WP_002210933.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NC_010634.1 RefSeq gene 2835879 2836883 . - . ID=gene2573;Name=YPTS_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12905;old_locus_tag=YPTS_2562 NC_010634.1 Protein Homology CDS 2835879 2836883 . - 0 ID=cds2494;Parent=gene2573;Dbxref=Genbank:WP_032465670.1;Name=WP_032465670.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_032465670.1;transl_table=11 NC_010634.1 RefSeq gene 2836947 2837114 . - . ID=gene2574;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YPTS_RS12910;old_locus_tag=YPTS_2563 NC_010634.1 Protein Homology CDS 2836947 2837114 . - 0 ID=cds2495;Parent=gene2574;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NC_010634.1 RefSeq gene 2837127 2837651 . - . ID=gene2575;Name=YPTS_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12915;old_locus_tag=YPTS_2564 NC_010634.1 Protein Homology CDS 2837127 2837651 . - 0 ID=cds2496;Parent=gene2575;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11 NC_010634.1 RefSeq gene 2837793 2838389 . + . ID=gene2576;Name=YPTS_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12920;old_locus_tag=YPTS_2565 NC_010634.1 Protein Homology CDS 2837793 2838389 . + 0 ID=cds2497;Parent=gene2576;Dbxref=Genbank:WP_012413779.1;Name=WP_012413779.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_012413779.1;transl_table=11 NC_010634.1 RefSeq gene 2838512 2839474 . - . ID=gene2577;Name=YPTS_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12925;old_locus_tag=YPTS_2566 NC_010634.1 Protein Homology CDS 2838512 2839474 . - 0 ID=cds2498;Parent=gene2577;Dbxref=Genbank:WP_011192608.1;Name=WP_011192608.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=23S rRNA pseudouridylate synthase C;protein_id=WP_011192608.1;transl_table=11 NC_010634.1 RefSeq gene 2840058 2843756 . + . ID=gene2578;Name=YPTS_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12930;old_locus_tag=YPTS_2568 NC_010634.1 Protein Homology CDS 2840058 2843756 . + 0 ID=cds2499;Parent=gene2578;Dbxref=Genbank:WP_041175569.1;Name=WP_041175569.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_041175569.1;transl_table=11 NC_010634.1 RefSeq gene 2844014 2844301 . - . ID=gene2579;Name=YPTS_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12935;old_locus_tag=YPTS_2569 NC_010634.1 Protein Homology CDS 2844014 2844301 . - 0 ID=cds2500;Parent=gene2579;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11 NC_010634.1 RefSeq gene 2844536 2845582 . + . ID=gene2580;Name=YPTS_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12940;old_locus_tag=YPTS_2570 NC_010634.1 Protein Homology CDS 2844536 2845582 . + 0 ID=cds2501;Parent=gene2580;Dbxref=Genbank:WP_011192610.1;Name=WP_011192610.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_011192610.1;transl_table=11 NC_010634.1 RefSeq gene 2845895 2846140 . + . ID=gene2581;Name=YPTS_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12945;old_locus_tag=YPTS_2571 NC_010634.1 Protein Homology CDS 2845895 2846140 . + 0 ID=cds2502;Parent=gene2581;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NC_010634.1 RefSeq gene 2846339 2846467 . - . ID=gene2582;Name=YPTS_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12950 NC_010634.1 Protein Homology CDS 2846339 2846467 . - 0 ID=cds2503;Parent=gene2582;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11 NC_010634.1 RefSeq gene 2846646 2846900 . + . ID=gene2583;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=YPTS_RS12955;old_locus_tag=YPTS_2572 NC_010634.1 Protein Homology CDS 2846646 2846900 . + 0 ID=cds2504;Parent=gene2583;Dbxref=Genbank:WP_012413782.1;Name=WP_012413782.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_012413782.1;transl_table=11 NC_010634.1 RefSeq gene 2847151 2848266 . + . ID=gene2584;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YPTS_RS12960;old_locus_tag=YPTS_2573 NC_010634.1 Protein Homology CDS 2847151 2848266 . + 0 ID=cds2505;Parent=gene2584;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NC_010634.1 RefSeq gene 2848533 2848730 . + . ID=gene2585;Name=YPTS_RS12965;end_range=2848730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS12965;old_locus_tag=YPTS_2574;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 2848533 2848730 . + 0 ID=cds2506;Parent=gene2585;end_range=2848730,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=LuxR family transcriptional regulator;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 2848740 2850054 . + . ID=id180;gbkey=repeat_region NC_010634.1 RefSeq gene 2848811 2850019 . + . ID=gene2586;Name=YPTS_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12970;old_locus_tag=YPTS_2575 NC_010634.1 Protein Homology CDS 2848811 2850019 . + 0 ID=cds2507;Parent=gene2586;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_010634.1 RefSeq gene 2850062 2850439 . + . ID=gene2587;Name=YPTS_RS12975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS12975;partial=true;pseudo=true;start_range=.,2850062 NC_010634.1 Protein Homology CDS 2850062 2850439 . + 0 ID=cds2508;Parent=gene2587;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=LuxR family transcriptional regulator;pseudo=true;start_range=.,2850062;transl_table=11 NC_010634.1 RefSeq gene 2851011 2852069 . - . ID=gene2588;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=YPTS_RS12980;old_locus_tag=YPTS_2578 NC_010634.1 Protein Homology CDS 2851011 2852069 . - 0 ID=cds2509;Parent=gene2588;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11 NC_010634.1 RefSeq gene 2852218 2853285 . - . ID=gene2589;Name=YPTS_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12985;old_locus_tag=YPTS_2579 NC_010634.1 Protein Homology CDS 2852218 2853285 . - 0 ID=cds2510;Parent=gene2589;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11 NC_010634.1 RefSeq gene 2853329 2853457 . - . ID=gene2590;Name=YPTS_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12990;old_locus_tag=YPTS_2580 NC_010634.1 Protein Homology CDS 2853329 2853457 . - 0 ID=cds2511;Parent=gene2590;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11 NC_010634.1 RefSeq gene 2853644 2853808 . - . ID=gene2591;Name=YPTS_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS12995;old_locus_tag=YPTS_2581 NC_010634.1 Protein Homology CDS 2853644 2853808 . - 0 ID=cds2512;Parent=gene2591;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11 NC_010634.1 RefSeq gene 2854138 2854299 . - . ID=gene2592;Name=YPTS_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13000 NC_010634.1 Protein Homology CDS 2854138 2854299 . - 0 ID=cds2513;Parent=gene2592;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11 NC_010634.1 RefSeq gene 2854740 2855663 . + . ID=gene2593;Name=YPTS_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13005;old_locus_tag=YPTS_2582 NC_010634.1 Protein Homology CDS 2854740 2855663 . + 0 ID=cds2514;Parent=gene2593;Dbxref=Genbank:WP_032466501.1;Name=WP_032466501.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=WP_032466501.1;transl_table=11 NC_010634.1 RefSeq gene 2856395 2857933 . + . ID=gene2594;Name=YPTS_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13010;old_locus_tag=YPTS_2584 NC_010634.1 Protein Homology CDS 2856395 2857933 . + 0 ID=cds2515;Parent=gene2594;Dbxref=Genbank:WP_011192613.1;Name=WP_011192613.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_011192613.1;transl_table=11 NC_010634.1 RefSeq gene 2858146 2858379 . - . ID=gene2595;Name=YPTS_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13015;old_locus_tag=YPTS_2585 NC_010634.1 Protein Homology CDS 2858146 2858379 . - 0 ID=cds2516;Parent=gene2595;Dbxref=Genbank:WP_032466681.1;Name=WP_032466681.1;gbkey=CDS;product=lipoprotein;protein_id=WP_032466681.1;transl_table=11 NC_010634.1 RefSeq gene 2858504 2861113 . - . ID=gene2596;Name=YPTS_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13020;old_locus_tag=YPTS_2586 NC_010634.1 Protein Homology CDS 2858504 2861113 . - 0 ID=cds2517;Parent=gene2596;Dbxref=Genbank:WP_012413787.1;Name=WP_012413787.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;gbkey=CDS;product=glucosyltransferase;protein_id=WP_012413787.1;transl_table=11 NC_010634.1 RefSeq gene 2861106 2862659 . - . ID=gene2597;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;gene_synonym=opgG;locus_tag=YPTS_RS13025;old_locus_tag=YPTS_2587 NC_010634.1 Protein Homology CDS 2861106 2862659 . - 0 ID=cds2518;Parent=gene2597;Dbxref=Genbank:WP_032466951.1;Name=WP_032466951.1;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan;gbkey=CDS;gene=mdoG;product=glucan biosynthesis protein G;protein_id=WP_032466951.1;transl_table=11 NC_010634.1 RefSeq gene 2863178 2863561 . + . ID=gene2598;Name=YPTS_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13030;old_locus_tag=YPTS_2588 NC_010634.1 Protein Homology CDS 2863178 2863561 . + 0 ID=cds2519;Parent=gene2598;Dbxref=Genbank:WP_012303967.1;Name=WP_012303967.1;gbkey=CDS;product=glucan biosynthesis protein;protein_id=WP_012303967.1;transl_table=11 NC_010634.1 RefSeq gene 2864122 2864367 . + . ID=gene2599;Name=YPTS_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13035;old_locus_tag=YPTS_2589 NC_010634.1 Protein Homology CDS 2864122 2864367 . + 0 ID=cds2520;Parent=gene2599;Dbxref=Genbank:WP_011192617.1;Name=WP_011192617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192617.1;transl_table=11 NC_010634.1 RefSeq gene 2864711 2866438 . + . ID=gene2600;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=nhaP2,ycgO;locus_tag=YPTS_RS13040;old_locus_tag=YPTS_2590 NC_010634.1 Protein Homology CDS 2864711 2866438 . + 0 ID=cds2521;Parent=gene2600;Dbxref=Genbank:WP_012413788.1;Name=WP_012413788.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=K+/H+ antiporter NhaP2;protein_id=WP_012413788.1;transl_table=11 NC_010634.1 RefSeq gene 2866570 2867496 . - . ID=gene2601;Name=YPTS_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13045;old_locus_tag=YPTS_2591 NC_010634.1 Protein Homology CDS 2866570 2867496 . - 0 ID=cds2522;Parent=gene2601;Dbxref=Genbank:WP_011192619.1;Name=WP_011192619.1;gbkey=CDS;product=DMT superfamliy metabolite exporter;protein_id=WP_011192619.1;transl_table=11 NC_010634.1 RefSeq gene 2867927 2868571 . + . ID=gene2602;Name=YPTS_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13050;old_locus_tag=YPTS_2592 NC_010634.1 Protein Homology CDS 2867927 2868571 . + 0 ID=cds2523;Parent=gene2602;Dbxref=Genbank:WP_002211858.1;Name=WP_002211858.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11 NC_010634.1 RefSeq gene 2868564 2869301 . - . ID=gene2603;Name=YPTS_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13055;old_locus_tag=YPTS_2593 NC_010634.1 Protein Homology CDS 2868564 2869301 . - 0 ID=cds2524;Parent=gene2603;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NC_010634.1 RefSeq gene 2869787 2870713 . - . ID=gene2604;Name=YPTS_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13060;old_locus_tag=YPTS_2594 NC_010634.1 Protein Homology CDS 2869787 2870713 . - 0 ID=cds2525;Parent=gene2604;Dbxref=Genbank:WP_011192620.1;Name=WP_011192620.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011192620.1;transl_table=11 NC_010634.1 RefSeq gene 2870828 2871037 . - . ID=gene2605;Name=YPTS_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13065;old_locus_tag=YPTS_2595 NC_010634.1 Protein Homology CDS 2870828 2871037 . - 0 ID=cds2526;Parent=gene2605;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11 NC_010634.1 RefSeq gene 2871161 2872519 . + . ID=gene2606;Name=YPTS_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13070;old_locus_tag=YPTS_2596 NC_010634.1 Protein Homology CDS 2871161 2872519 . + 0 ID=cds2527;Parent=gene2606;Dbxref=Genbank:WP_012413789.1;Name=WP_012413789.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012413789.1;transl_table=11 NC_010634.1 RefSeq gene 2872566 2873069 . + . ID=gene2607;Name=YPTS_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13075;old_locus_tag=YPTS_2597 NC_010634.1 Protein Homology CDS 2872566 2873069 . + 0 ID=cds2528;Parent=gene2607;Dbxref=Genbank:WP_011192622.1;Name=WP_011192622.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_011192622.1;transl_table=11 NC_010634.1 RefSeq gene 2873080 2874099 . + . ID=gene2608;Name=YPTS_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13080;old_locus_tag=YPTS_2598 NC_010634.1 Protein Homology CDS 2873080 2874099 . + 0 ID=cds2529;Parent=gene2608;Dbxref=Genbank:WP_011192623.1;Name=WP_011192623.1;gbkey=CDS;product=NADP-dependent aryl-alcohol dehydrogenase;protein_id=WP_011192623.1;transl_table=11 NC_010634.1 RefSeq gene 2874177 2874731 . - . ID=gene2609;Name=YPTS_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13085;old_locus_tag=YPTS_2599 NC_010634.1 Protein Homology CDS 2874177 2874731 . - 0 ID=cds2530;Parent=gene2609;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11 NC_010634.1 RefSeq gene 2874742 2875746 . - . ID=gene2610;Name=YPTS_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13090;old_locus_tag=YPTS_2600 NC_010634.1 Protein Homology CDS 2874742 2875746 . - 0 ID=cds2531;Parent=gene2610;Dbxref=Genbank:WP_011192624.1;Name=WP_011192624.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_011192624.1;transl_table=11 NC_010634.1 RefSeq gene 2875764 2876714 . - . ID=gene2611;Name=YPTS_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13095;old_locus_tag=YPTS_2601 NC_010634.1 Protein Homology CDS 2875764 2876714 . - 0 ID=cds2532;Parent=gene2611;Dbxref=Genbank:WP_011192625.1;Name=WP_011192625.1;gbkey=CDS;product=CRISPR type I-F system protein Csy2;protein_id=WP_011192625.1;transl_table=11 NC_010634.1 RefSeq gene 2876711 2878057 . - . ID=gene2612;Name=YPTS_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13100;old_locus_tag=YPTS_2602 NC_010634.1 Protein Homology CDS 2876711 2878057 . - 0 ID=cds2533;Parent=gene2612;Dbxref=Genbank:WP_011192626.1;Name=WP_011192626.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_011192626.1;transl_table=11 NC_010634.1 RefSeq gene 2878213 2881503 . - . ID=gene2613;Name=YPTS_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13105;old_locus_tag=YPTS_2603 NC_010634.1 Protein Homology CDS 2878213 2881503 . - 0 ID=cds2534;Parent=gene2613;Dbxref=Genbank:WP_012413790.1;Name=WP_012413790.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_012413790.1;transl_table=11 NC_010634.1 RefSeq gene 2881500 2882480 . - . ID=gene2614;Name=YPTS_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13110;old_locus_tag=YPTS_2604 NC_010634.1 Protein Homology CDS 2881500 2882480 . - 0 ID=cds2535;Parent=gene2614;Dbxref=Genbank:WP_012413791.1;Name=WP_012413791.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_012413791.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2882840 2883348 . + . ID=id181;gbkey=repeat_region NC_010634.1 RefSeq gene 2883686 2884930 . + . ID=gene2615;Name=YPTS_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13115;old_locus_tag=YPTS_2605 NC_010634.1 Protein Homology CDS 2883686 2884930 . + 0 ID=cds2536;Parent=gene2615;Dbxref=Genbank:WP_011192629.1;Name=WP_011192629.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_011192629.1;transl_table=11 NC_010634.1 RefSeq gene 2885489 2886763 . - . ID=gene2616;Name=YPTS_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13120;old_locus_tag=YPTS_2606 NC_010634.1 Protein Homology CDS 2885489 2886763 . - 0 ID=cds2537;Parent=gene2616;Dbxref=Genbank:WP_011192630.1;Name=WP_011192630.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192630.1;transl_table=11 NC_010634.1 RefSeq gene 2886802 2887917 . - . ID=gene2617;Name=YPTS_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13125;old_locus_tag=YPTS_2607 NC_010634.1 Protein Homology CDS 2886802 2887917 . - 0 ID=cds2538;Parent=gene2617;Dbxref=Genbank:WP_002230953.1;Name=WP_002230953.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230953.1;transl_table=11 NC_010634.1 RefSeq gene 2888040 2888978 . - . ID=gene2618;Name=YPTS_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13130;old_locus_tag=YPTS_2608 NC_010634.1 Protein Homology CDS 2888040 2888978 . - 0 ID=cds2539;Parent=gene2618;Dbxref=Genbank:WP_011192631.1;Name=WP_011192631.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192631.1;transl_table=11 NC_010634.1 RefSeq gene 2889005 2890060 . - . ID=gene2619;Name=YPTS_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13135;old_locus_tag=YPTS_2609 NC_010634.1 Protein Homology CDS 2889005 2890060 . - 0 ID=cds2540;Parent=gene2619;Dbxref=Genbank:WP_011192632.1;Name=WP_011192632.1;gbkey=CDS;product=glycosidase;protein_id=WP_011192632.1;transl_table=11 NC_010634.1 RefSeq gene 2890207 2891031 . - . ID=gene2620;Name=YPTS_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13140;old_locus_tag=YPTS_2610 NC_010634.1 Protein Homology CDS 2890207 2891031 . - 0 ID=cds2541;Parent=gene2620;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NC_010634.1 RefSeq gene 2891032 2891907 . - . ID=gene2621;Name=YPTS_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13145;old_locus_tag=YPTS_2611 NC_010634.1 Protein Homology CDS 2891032 2891907 . - 0 ID=cds2542;Parent=gene2621;Dbxref=Genbank:WP_011192633.1;Name=WP_011192633.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011192633.1;transl_table=11 NC_010634.1 RefSeq gene 2892016 2893302 . - . ID=gene2622;Name=YPTS_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13150;old_locus_tag=YPTS_2612 NC_010634.1 Protein Homology CDS 2892016 2893302 . - 0 ID=cds2543;Parent=gene2622;Dbxref=Genbank:WP_011192634.1;Name=WP_011192634.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011192634.1;transl_table=11 NC_010634.1 RefSeq gene 2893574 2894614 . + . ID=gene2623;Name=YPTS_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13155;old_locus_tag=YPTS_2613 NC_010634.1 Protein Homology CDS 2893574 2894614 . + 0 ID=cds2544;Parent=gene2623;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NC_010634.1 RefSeq gene 2894631 2896019 . + . ID=gene2624;Name=YPTS_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13160;old_locus_tag=YPTS_2614 NC_010634.1 Protein Homology CDS 2894631 2896019 . + 0 ID=cds2545;Parent=gene2624;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11 NC_010634.1 RefSeq gene 2896119 2897198 . + . ID=gene2625;Name=YPTS_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13165;old_locus_tag=YPTS_2615 NC_010634.1 Protein Homology CDS 2896119 2897198 . + 0 ID=cds2546;Parent=gene2625;Dbxref=Genbank:WP_011192635.1;Name=WP_011192635.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192635.1;transl_table=11 NC_010634.1 RefSeq gene 2897463 2897915 . - . ID=gene2626;Name=YPTS_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13170;old_locus_tag=YPTS_2616 NC_010634.1 Protein Homology CDS 2897463 2897915 . - 0 ID=cds2547;Parent=gene2626;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NC_010634.1 RefSeq gene 2898266 2898631 . - . ID=gene2627;Name=YPTS_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13175;old_locus_tag=YPTS_2617 NC_010634.1 Protein Homology CDS 2898266 2898631 . - 0 ID=cds2548;Parent=gene2627;Dbxref=Genbank:WP_012413792.1;Name=WP_012413792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413792.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2898718 2899467 . + . ID=id182;gbkey=repeat_region NC_010634.1 RefSeq gene 2898944 2899237 . - . ID=gene2628;Name=YPTS_RS13180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS13180;partial=true;pseudo=true;start_range=.,2898944 NC_010634.1 Protein Homology CDS 2898944 2899237 . - 0 ID=cds2549;Parent=gene2628;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hemagglutinin;pseudo=true;start_range=.,2898944;transl_table=11 NC_010634.1 RefSeq gene 2899590 2899937 . - . ID=gene2629;Name=YPTS_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13185 NC_010634.1 Protein Homology CDS 2899590 2899937 . - 0 ID=cds2550;Parent=gene2629;Dbxref=Genbank:WP_024063279.1;Name=WP_024063279.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063279.1;transl_table=11 NC_010634.1 RefSeq gene 2900078 2900329 . - . ID=gene2630;Name=YPTS_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13190;old_locus_tag=YPTS_2619 NC_010634.1 Protein Homology CDS 2900078 2900329 . - 0 ID=cds2551;Parent=gene2630;Dbxref=Genbank:WP_011192636.1;Name=WP_011192636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192636.1;transl_table=11 NC_010634.1 RefSeq gene 2900574 2901083 . - . ID=gene2631;Name=YPTS_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13195;old_locus_tag=YPTS_2620 NC_010634.1 Protein Homology CDS 2900574 2901083 . - 0 ID=cds2552;Parent=gene2631;Dbxref=Genbank:WP_002210211.1;Name=WP_002210211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210211.1;transl_table=11 NC_010634.1 RefSeq gene 2901085 2908680 . - . ID=gene2632;Name=YPTS_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13200;old_locus_tag=YPTS_2621 NC_010634.1 Protein Homology CDS 2901085 2908680 . - 0 ID=cds2553;Parent=gene2632;Dbxref=Genbank:WP_012413794.1;Name=WP_012413794.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_012413794.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2902275 2903024 . + . ID=id183;gbkey=repeat_region NC_010634.1 RefSeq gene 2908836 2910524 . - . ID=gene2633;Name=YPTS_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13205;old_locus_tag=YPTS_2622 NC_010634.1 Protein Homology CDS 2908836 2910524 . - 0 ID=cds2554;Parent=gene2633;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11 NC_010634.1 RefSeq gene 2911180 2912145 . - . ID=gene2634;Name=YPTS_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13210;old_locus_tag=YPTS_2623 NC_010634.1 Protein Homology CDS 2911180 2912145 . - 0 ID=cds2555;Parent=gene2634;Dbxref=Genbank:WP_011192638.1;Name=WP_011192638.1;gbkey=CDS;product=dioxygenase subunit beta;protein_id=WP_011192638.1;transl_table=11 NC_010634.1 RefSeq gene 2912241 2913365 . - . ID=gene2635;Name=YPTS_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13215;old_locus_tag=YPTS_2624 NC_010634.1 Protein Homology CDS 2912241 2913365 . - 0 ID=cds2556;Parent=gene2635;Dbxref=Genbank:WP_002213815.1;Name=WP_002213815.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002213815.1;transl_table=11 NC_010634.1 RefSeq gene 2913482 2915128 . - . ID=gene2636;Name=YPTS_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13220;old_locus_tag=YPTS_2625 NC_010634.1 Protein Homology CDS 2913482 2915128 . - 0 ID=cds2557;Parent=gene2636;Dbxref=Genbank:WP_012413795.1;Name=WP_012413795.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_012413795.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2915535 2915712 . + . ID=id184;gbkey=repeat_region NC_010634.1 RefSeq gene 2915746 2916831 . - . ID=gene2637;Name=YPTS_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13225;old_locus_tag=YPTS_2627 NC_010634.1 Protein Homology CDS 2915746 2916831 . - 0 ID=cds2558;Parent=gene2637;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NC_010634.1 RefSeq gene 2916934 2917875 . + . ID=gene2638;Name=YPTS_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13230;old_locus_tag=YPTS_2628 NC_010634.1 Protein Homology CDS 2916934 2917875 . + 0 ID=cds2559;Parent=gene2638;Dbxref=Genbank:WP_011192640.1;Name=WP_011192640.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011192640.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2918054 2918180 . + . ID=id185;gbkey=repeat_region NC_010634.1 RefSeq gene 2918247 2919251 . + . ID=gene2639;Name=YPTS_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13235;old_locus_tag=YPTS_2629 NC_010634.1 Protein Homology CDS 2918247 2919251 . + 0 ID=cds2560;Parent=gene2639;Dbxref=Genbank:WP_011192641.1;Name=WP_011192641.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011192641.1;transl_table=11 NC_010634.1 RefSeq gene 2919384 2920376 . - . ID=gene2640;Name=YPTS_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13240;old_locus_tag=YPTS_2630 NC_010634.1 Protein Homology CDS 2919384 2920376 . - 0 ID=cds2561;Parent=gene2640;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NC_010634.1 RefSeq gene 2920373 2921863 . - . ID=gene2641;Name=YPTS_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13245;old_locus_tag=YPTS_2631 NC_010634.1 Protein Homology CDS 2920373 2921863 . - 0 ID=cds2562;Parent=gene2641;Dbxref=Genbank:WP_011192642.1;Name=WP_011192642.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_011192642.1;transl_table=11 NC_010634.1 RefSeq gene 2921920 2922837 . - . ID=gene2642;Name=YPTS_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13250;old_locus_tag=YPTS_2632 NC_010634.1 Protein Homology CDS 2921920 2922837 . - 0 ID=cds2563;Parent=gene2642;Dbxref=Genbank:WP_011192643.1;Name=WP_011192643.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011192643.1;transl_table=11 NC_010634.1 RefSeq gene 2923012 2924079 . - . ID=gene2643;Name=YPTS_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13255;old_locus_tag=YPTS_2633 NC_010634.1 Protein Homology CDS 2923012 2924079 . - 0 ID=cds2564;Parent=gene2643;Dbxref=Genbank:WP_024063275.1;Name=WP_024063275.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_024063275.1;transl_table=11 NC_010634.1 RefSeq gene 2924887 2925549 . - . ID=gene2644;Name=YPTS_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13260;old_locus_tag=YPTS_2634 NC_010634.1 Protein Homology CDS 2924887 2925549 . - 0 ID=cds2565;Parent=gene2644;Dbxref=Genbank:WP_012413797.1;Name=WP_012413797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413797.1;transl_table=11 NC_010634.1 RefSeq gene 2925726 2926298 . - . ID=gene2645;Name=YPTS_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13265;old_locus_tag=YPTS_2635 NC_010634.1 Protein Homology CDS 2925726 2926298 . - 0 ID=cds2566;Parent=gene2645;Dbxref=Genbank:WP_012413798.1;Name=WP_012413798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413798.1;transl_table=11 NC_010634.1 RefSeq gene 2926536 2927474 . - . ID=gene2646;Name=YPTS_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13270;old_locus_tag=YPTS_2636 NC_010634.1 Protein Homology CDS 2926536 2927474 . - 0 ID=cds2567;Parent=gene2646;Dbxref=Genbank:WP_012413799.1;Name=WP_012413799.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_012413799.1;transl_table=11 NC_010634.1 RefSeq gene 2927790 2928314 . - . ID=gene2647;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YPTS_RS13275;old_locus_tag=YPTS_2637 NC_010634.1 Protein Homology CDS 2927790 2928314 . - 0 ID=cds2568;Parent=gene2647;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11 NC_010634.1 RefSeq gene 2928719 2929606 . + . ID=gene2648;Name=YPTS_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13280;old_locus_tag=YPTS_2638 NC_010634.1 Protein Homology CDS 2928719 2929606 . + 0 ID=cds2569;Parent=gene2648;Dbxref=Genbank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002213809.1;transl_table=11 NC_010634.1 RefSeq gene 2929622 2930119 . + . ID=gene2649;Name=YPTS_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13285;old_locus_tag=YPTS_2639 NC_010634.1 Protein Homology CDS 2929622 2930119 . + 0 ID=cds2570;Parent=gene2649;Dbxref=Genbank:WP_002210231.1;Name=WP_002210231.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002210231.1;transl_table=11 NC_010634.1 RefSeq gene 2930142 2930918 . + . ID=gene2650;Name=YPTS_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13290;old_locus_tag=YPTS_2640 NC_010634.1 Protein Homology CDS 2930142 2930918 . + 0 ID=cds2571;Parent=gene2650;Dbxref=Genbank:WP_002210232.1;Name=WP_002210232.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_002210232.1;transl_table=11 NC_010634.1 RefSeq gene 2931175 2931678 . + . ID=gene2651;Name=YPTS_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13295;old_locus_tag=YPTS_2641 NC_010634.1 Protein Homology CDS 2931175 2931678 . + 0 ID=cds2572;Parent=gene2651;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11 NC_010634.1 RefSeq gene 2931998 2933125 . + . ID=gene2652;Name=YPTS_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13300;old_locus_tag=YPTS_2642 NC_010634.1 Protein Homology CDS 2931998 2933125 . + 0 ID=cds2573;Parent=gene2652;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11 NC_010634.1 RefSeq gene 2933122 2933367 . - . ID=gene2653;Name=YPTS_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13305 NC_010634.1 GeneMarkS+ CDS 2933122 2933367 . - 0 ID=cds2574;Parent=gene2653;Dbxref=Genbank:WP_032466515.1;Name=WP_032466515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466515.1;transl_table=11 NC_010634.1 RefSeq gene 2933694 2934437 . + . ID=gene2654;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YPTS_RS13310;old_locus_tag=YPTS_2643 NC_010634.1 Protein Homology CDS 2933694 2934437 . + 0 ID=cds2575;Parent=gene2654;Dbxref=Genbank:WP_011192648.1;Name=WP_011192648.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_011192648.1;transl_table=11 NC_010634.1 RefSeq gene 2934472 2935128 . + . ID=gene2655;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YPTS_RS13315;old_locus_tag=YPTS_2644 NC_010634.1 Protein Homology CDS 2934472 2935128 . + 0 ID=cds2576;Parent=gene2655;Dbxref=Genbank:WP_012413800.1;Name=WP_012413800.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_012413800.1;transl_table=11 NC_010634.1 RefSeq gene 2935125 2935847 . + . ID=gene2656;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YPTS_RS13320;old_locus_tag=YPTS_2645 NC_010634.1 Protein Homology CDS 2935125 2935847 . + 0 ID=cds2577;Parent=gene2656;Dbxref=Genbank:WP_011192649.1;Name=WP_011192649.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_011192649.1;transl_table=11 NC_010634.1 RefSeq gene 2936058 2937362 . - . ID=gene2657;Name=YPTS_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13325;old_locus_tag=YPTS_2646 NC_010634.1 Protein Homology CDS 2936058 2937362 . - 0 ID=cds2578;Parent=gene2657;Dbxref=Genbank:WP_011192650.1;Name=WP_011192650.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_011192650.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2937440 2937610 . + . ID=id186;gbkey=repeat_region NC_010634.1 RefSeq gene 2938147 2939157 . - . ID=gene2658;Name=YPTS_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13330;old_locus_tag=YPTS_2647 NC_010634.1 Protein Homology CDS 2938147 2939157 . - 0 ID=cds2579;Parent=gene2658;Dbxref=Genbank:WP_002230969.1;Name=WP_002230969.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_002230969.1;transl_table=11 NC_010634.1 RefSeq gene 2939445 2939705 . + . ID=gene2659;Name=YPTS_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13335;old_locus_tag=YPTS_2648 NC_010634.1 Protein Homology CDS 2939445 2939705 . + 0 ID=cds2580;Parent=gene2659;Dbxref=Genbank:WP_002210240.1;Name=WP_002210240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210240.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2939869 2940042 . + . ID=id187;gbkey=repeat_region NC_010634.1 RefSeq gene 2940087 2941046 . - . ID=gene2660;Name=YPTS_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13340;old_locus_tag=YPTS_2649 NC_010634.1 Protein Homology CDS 2940087 2941046 . - 0 ID=cds2581;Parent=gene2660;Dbxref=Genbank:WP_012413801.1;Name=WP_012413801.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_012413801.1;transl_table=11 NC_010634.1 RefSeq gene 2941112 2942527 . - . ID=gene2661;Name=YPTS_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13345;old_locus_tag=YPTS_2650 NC_010634.1 Protein Homology CDS 2941112 2942527 . - 0 ID=cds2582;Parent=gene2661;Dbxref=Genbank:WP_012413802.1;Name=WP_012413802.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_012413802.1;transl_table=11 NC_010634.1 RefSeq gene 2942515 2943486 . - . ID=gene2662;Name=YPTS_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13350;old_locus_tag=YPTS_2651 NC_010634.1 Protein Homology CDS 2942515 2943486 . - 0 ID=cds2583;Parent=gene2662;Dbxref=Genbank:WP_012413803.1;Name=WP_012413803.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_012413803.1;transl_table=11 NC_010634.1 RefSeq gene 2943486 2944343 . - . ID=gene2663;Name=YPTS_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13355;old_locus_tag=YPTS_2652 NC_010634.1 Protein Homology CDS 2943486 2944343 . - 0 ID=cds2584;Parent=gene2663;Dbxref=Genbank:WP_002210245.1;Name=WP_002210245.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=naphthoate synthase;protein_id=WP_002210245.1;transl_table=11 NC_010634.1 RefSeq gene 2944357 2945175 . - . ID=gene2664;Name=YPTS_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13360;old_locus_tag=YPTS_2653 NC_010634.1 Protein Homology CDS 2944357 2945175 . - 0 ID=cds2585;Parent=gene2664;Dbxref=Genbank:WP_012413804.1;Name=WP_012413804.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_012413804.1;transl_table=11 NC_010634.1 RefSeq gene 2945172 2946875 . - . ID=gene2665;Name=YPTS_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13365;old_locus_tag=YPTS_2654 NC_010634.1 Protein Homology CDS 2945172 2946875 . - 0 ID=cds2586;Parent=gene2665;Dbxref=Genbank:WP_012413805.1;Name=WP_012413805.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_012413805.1;transl_table=11 NC_010634.1 RefSeq gene 2947103 2948470 . - . ID=gene2666;Name=YPTS_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13370;old_locus_tag=YPTS_2655 NC_010634.1 Protein Homology CDS 2947103 2948470 . - 0 ID=cds2587;Parent=gene2666;Dbxref=Genbank:WP_011192657.1;Name=WP_011192657.1;gbkey=CDS;product=isochorismate synthase;protein_id=WP_011192657.1;transl_table=11 NC_010634.1 RefSeq gene 2949015 2949659 . - . ID=gene2667;Name=YPTS_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13375;old_locus_tag=YPTS_2656 NC_010634.1 Protein Homology CDS 2949015 2949659 . - 0 ID=cds2588;Parent=gene2667;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11 NC_010634.1 RefSeq gene 2950214 2950522 . - . ID=gene2668;Name=YPTS_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13380;old_locus_tag=YPTS_2657 NC_010634.1 Protein Homology CDS 2950214 2950522 . - 0 ID=cds2589;Parent=gene2668;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11 NC_010634.1 RefSeq gene 2951090 2951233 . + . ID=gene2669;Name=YPTS_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13385;old_locus_tag=YPTS_2658 NC_010634.1 Protein Homology CDS 2951090 2951233 . + 0 ID=cds2590;Parent=gene2669;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11 NC_010634.1 RefSeq gene 2951174 2951386 . - . ID=gene2670;Name=YPTS_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13390 NC_010634.1 Protein Homology CDS 2951174 2951386 . - 0 ID=cds2591;Parent=gene2670;Dbxref=Genbank:WP_002215888.1;Name=WP_002215888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215888.1;transl_table=11 NC_010634.1 RefSeq gene 2951452 2953368 . - . ID=gene2671;Name=YPTS_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13395;old_locus_tag=YPTS_2660 NC_010634.1 Protein Homology CDS 2951452 2953368 . - 0 ID=cds2592;Parent=gene2671;Dbxref=Genbank:WP_011192658.1;Name=WP_011192658.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_011192658.1;transl_table=11 NC_010634.1 RefSeq gene 2953378 2953893 . - . ID=gene2672;Name=YPTS_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13400;old_locus_tag=YPTS_2661 NC_010634.1 Protein Homology CDS 2953378 2953893 . - 0 ID=cds2593;Parent=gene2672;Dbxref=Genbank:WP_011192659.1;Name=WP_011192659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192659.1;transl_table=11 NC_010634.1 RefSeq gene 2953923 2955239 . - . ID=gene2673;Name=YPTS_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13405;old_locus_tag=YPTS_2662 NC_010634.1 Protein Homology CDS 2953923 2955239 . - 0 ID=cds2594;Parent=gene2673;Dbxref=Genbank:WP_011192660.1;Name=WP_011192660.1;gbkey=CDS;product=2-ketogluconate transporter;protein_id=WP_011192660.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2955592 2955764 . + . ID=id188;gbkey=repeat_region NC_010634.1 RefSeq gene 2955785 2956735 . - . ID=gene2674;Name=YPTS_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13410;old_locus_tag=YPTS_2663 NC_010634.1 Protein Homology CDS 2955785 2956735 . - 0 ID=cds2595;Parent=gene2674;Dbxref=Genbank:WP_011192661.1;Name=WP_011192661.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_011192661.1;transl_table=11 NC_010634.1 RefSeq gene 2956754 2956874 . - . ID=gene2675;Name=YPTS_RS13415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS13415;pseudo=true NC_010634.1 Protein Homology CDS 2956754 2956874 . - 0 ID=cds2596;Parent=gene2675;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 2957199 2958191 . - . ID=gene2676;Name=YPTS_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13420;old_locus_tag=YPTS_2664 NC_010634.1 Protein Homology CDS 2957199 2958191 . - 0 ID=cds2597;Parent=gene2676;Dbxref=Genbank:WP_011192662.1;Name=WP_011192662.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192662.1;transl_table=11 NC_010634.1 RefSeq gene 2958677 2959981 . + . ID=gene2677;Name=YPTS_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13425;old_locus_tag=YPTS_2665 NC_010634.1 Protein Homology CDS 2958677 2959981 . + 0 ID=cds2598;Parent=gene2677;Dbxref=Genbank:WP_011192663.1;Name=WP_011192663.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192663.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2960514 2960691 . + . ID=id189;gbkey=repeat_region NC_010634.1 RefSeq gene 2960720 2961484 . + . ID=gene2678;Name=YPTS_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13430;old_locus_tag=YPTS_2666 NC_010634.1 Protein Homology CDS 2960720 2961484 . + 0 ID=cds2599;Parent=gene2678;Dbxref=Genbank:WP_011192664.1;Name=WP_011192664.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_011192664.1;transl_table=11 NC_010634.1 RefSeq gene 2961533 2962069 . + . ID=gene2679;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPTS_RS13435;old_locus_tag=YPTS_2667 NC_010634.1 Protein Homology CDS 2961533 2962069 . + 0 ID=cds2600;Parent=gene2679;Dbxref=Genbank:WP_002210265.1;Name=WP_002210265.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_002210265.1;transl_table=11 NC_010634.1 RefSeq gene 2962147 2962614 . + . ID=gene2680;Name=YPTS_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13440;old_locus_tag=YPTS_2668 NC_010634.1 Protein Homology CDS 2962147 2962614 . + 0 ID=cds2601;Parent=gene2680;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11 NC_010634.1 RefSeq gene 2962933 2964201 . - . ID=gene2681;Name=YPTS_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13445;old_locus_tag=YPTS_2669 NC_010634.1 Protein Homology CDS 2962933 2964201 . - 0 ID=cds2602;Parent=gene2681;Dbxref=Genbank:WP_011192665.1;Name=WP_011192665.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192665.1;transl_table=11 NC_010634.1 RefSeq gene 2964440 2965903 . - . ID=gene2682;Name=YPTS_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13450;old_locus_tag=YPTS_2670 NC_010634.1 Protein Homology CDS 2964440 2965903 . - 0 ID=cds2603;Parent=gene2682;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11 NC_010634.1 RefSeq gene 2965910 2967442 . - . ID=gene2683;Name=YPTS_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13455;old_locus_tag=YPTS_2671 NC_010634.1 Protein Homology CDS 2965910 2967442 . - 0 ID=cds2604;Parent=gene2683;Dbxref=Genbank:WP_002210269.1;Name=WP_002210269.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NC_010634.1 RefSeq gene 2967482 2969326 . - . ID=gene2684;Name=YPTS_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13460;old_locus_tag=YPTS_2672 NC_010634.1 Protein Homology CDS 2967482 2969326 . - 0 ID=cds2605;Parent=gene2684;Dbxref=Genbank:WP_011192667.1;Name=WP_011192667.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_011192667.1;transl_table=11 NC_010634.1 RefSeq gene 2969323 2969625 . - . ID=gene2685;Name=YPTS_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13465;old_locus_tag=YPTS_2673 NC_010634.1 Protein Homology CDS 2969323 2969625 . - 0 ID=cds2606;Parent=gene2685;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11 NC_010634.1 RefSeq gene 2969622 2970167 . - . ID=gene2686;Name=YPTS_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13470;old_locus_tag=YPTS_2674 NC_010634.1 Protein Homology CDS 2969622 2970167 . - 0 ID=cds2607;Parent=gene2686;Dbxref=Genbank:WP_002210272.1;Name=WP_002210272.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NC_010634.1 RefSeq gene 2970180 2970722 . - . ID=gene2687;Name=YPTS_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13475;old_locus_tag=YPTS_2675 NC_010634.1 Protein Homology CDS 2970180 2970722 . - 0 ID=cds2608;Parent=gene2687;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11 NC_010634.1 RefSeq gene 2970737 2971714 . - . ID=gene2688;Name=YPTS_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13480;old_locus_tag=YPTS_2676 NC_010634.1 Protein Homology CDS 2970737 2971714 . - 0 ID=cds2609;Parent=gene2688;Dbxref=Genbank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_002210274.1;transl_table=11 NC_010634.1 RefSeq gene 2971711 2974455 . - . ID=gene2689;Name=YPTS_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13485;old_locus_tag=YPTS_2677 NC_010634.1 Protein Homology CDS 2971711 2974455 . - 0 ID=cds2610;Parent=gene2689;Dbxref=Genbank:WP_011192668.1;Name=WP_011192668.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit G;protein_id=WP_011192668.1;transl_table=11 NC_010634.1 RefSeq gene 2974542 2975927 . - . ID=gene2690;Name=YPTS_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13490;old_locus_tag=YPTS_2678 NC_010634.1 Protein Homology CDS 2974542 2975927 . - 0 ID=cds2611;Parent=gene2690;Dbxref=Genbank:WP_011192669.1;Name=WP_011192669.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_011192669.1;transl_table=11 NC_010634.1 RefSeq gene 2975924 2976487 . - . ID=gene2691;Name=YPTS_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13495;old_locus_tag=YPTS_2679 NC_010634.1 Protein Homology CDS 2975924 2976487 . - 0 ID=cds2612;Parent=gene2691;Dbxref=Genbank:WP_011192670.1;Name=WP_011192670.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_011192670.1;transl_table=11 NC_010634.1 RefSeq gene 2976490 2978286 . - . ID=gene2692;Name=YPTS_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13500;old_locus_tag=YPTS_2680 NC_010634.1 Protein Homology CDS 2976490 2978286 . - 0 ID=cds2613;Parent=gene2692;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NC_010634.1 RefSeq gene 2978429 2979106 . - . ID=gene2693;Name=YPTS_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13505;old_locus_tag=YPTS_2681 NC_010634.1 Protein Homology CDS 2978429 2979106 . - 0 ID=cds2614;Parent=gene2693;Dbxref=Genbank:WP_002210278.1;Name=WP_002210278.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002210278.1;transl_table=11 NC_010634.1 RefSeq gene 2979208 2979708 . - . ID=gene2694;Name=YPTS_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13510;old_locus_tag=YPTS_2682 NC_010634.1 Protein Homology CDS 2979208 2979708 . - 0 ID=cds2615;Parent=gene2694;Dbxref=Genbank:WP_012413807.1;Name=WP_012413807.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_012413807.1;transl_table=11 NC_010634.1 RefSeq gene 2980386 2981348 . - . ID=gene2695;Name=YPTS_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13515;old_locus_tag=YPTS_2683 NC_010634.1 Protein Homology CDS 2980386 2981348 . - 0 ID=cds2616;Parent=gene2695;Dbxref=Genbank:WP_012413808.1;Name=WP_012413808.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012413808.1;transl_table=11 NC_010634.1 RefSeq gene 2981799 2982071 . - . ID=gene2696;Name=YPTS_RS13520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS13520;pseudo=true NC_010634.1 Protein Homology CDS 2981799 2982071 . - 0 ID=cds2617;Parent=gene2696;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2982063..2982065)%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 2982204 2983418 . + . ID=gene2697;Name=YPTS_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13525;old_locus_tag=YPTS_2684 NC_010634.1 Protein Homology CDS 2982204 2983418 . + 0 ID=cds2618;Parent=gene2697;Dbxref=Genbank:WP_011192671.1;Name=WP_011192671.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase AlaT;protein_id=WP_011192671.1;transl_table=11 NC_010634.1 RefSeq gene 2983569 2984162 . + . ID=gene2698;Name=YPTS_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13530;old_locus_tag=YPTS_2685 NC_010634.1 Protein Homology CDS 2983569 2984162 . + 0 ID=cds2619;Parent=gene2698;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11 NC_010634.1 RefSeq gene 2984209 2984400 . - . ID=gene2699;Name=YPTS_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13535 NC_010634.1 Protein Homology CDS 2984209 2984400 . - 0 ID=cds2620;Parent=gene2699;Dbxref=Genbank:WP_032467061.1;Name=WP_032467061.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467061.1;transl_table=11 NC_010634.1 RefSeq gene 2984875 2986707 . - . ID=gene2700;Name=YPTS_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13540;old_locus_tag=YPTS_2687 NC_010634.1 Protein Homology CDS 2984875 2986707 . - 0 ID=cds2621;Parent=gene2700;Dbxref=Genbank:WP_002227880.1;Name=WP_002227880.1;gbkey=CDS;product=citrate transporter;protein_id=WP_002227880.1;transl_table=11 NC_010634.1 RefSeq gene 2986999 2987655 . - . ID=gene2701;Name=YPTS_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13545;old_locus_tag=YPTS_2688 NC_010634.1 Protein Homology CDS 2986999 2987655 . - 0 ID=cds2622;Parent=gene2701;Dbxref=Genbank:WP_012413810.1;Name=WP_012413810.1;gbkey=CDS;product=phosphatase;protein_id=WP_012413810.1;transl_table=11 NC_010634.1 RefSeq gene 2987820 2988314 . - . ID=gene2702;Name=YPTS_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13550;old_locus_tag=YPTS_2689 NC_010634.1 Protein Homology CDS 2987820 2988314 . - 0 ID=cds2623;Parent=gene2702;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11 NC_010634.1 RefSeq gene 2988666 2989121 . - . ID=gene2703;Name=YPTS_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13555;old_locus_tag=YPTS_2690 NC_010634.1 Protein Homology CDS 2988666 2989121 . - 0 ID=cds2624;Parent=gene2703;Dbxref=Genbank:WP_011192676.1;Name=WP_011192676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192676.1;transl_table=11 NC_010634.1 RefSeq gene 2989362 2989553 . + . ID=gene2704;Name=YPTS_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13560 NC_010634.1 Protein Homology CDS 2989362 2989553 . + 0 ID=cds2625;Parent=gene2704;Dbxref=Genbank:WP_011192677.1;Name=WP_011192677.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192677.1;transl_table=11 NC_010634.1 RefSeq gene 2989543 2990745 . + . ID=gene2705;Name=YPTS_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13565;old_locus_tag=YPTS_2691 NC_010634.1 Protein Homology CDS 2989543 2990745 . + 0 ID=cds2626;Parent=gene2705;Dbxref=Genbank:WP_012413811.1;Name=WP_012413811.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_012413811.1;transl_table=11 NC_010634.1 RefSeq gene 2990928 2993066 . + . ID=gene2706;Name=YPTS_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13570;old_locus_tag=YPTS_2692 NC_010634.1 Protein Homology CDS 2990928 2993066 . + 0 ID=cds2627;Parent=gene2706;Dbxref=Genbank:WP_002265141.1;Name=WP_002265141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NC_010634.1 RefSeq repeat_region 2993080 2993250 . + . ID=id190;gbkey=repeat_region NC_010634.1 RefSeq gene 2993332 2994366 . - . ID=gene2707;Name=YPTS_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13575;old_locus_tag=YPTS_2693 NC_010634.1 Protein Homology CDS 2993332 2994366 . - 0 ID=cds2628;Parent=gene2707;Dbxref=Genbank:WP_011192679.1;Name=WP_011192679.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011192679.1;transl_table=11 NC_010634.1 RefSeq gene 2994733 2995176 . + . ID=gene2708;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=YPTS_RS13580;old_locus_tag=YPTS_2694 NC_010634.1 Protein Homology CDS 2994733 2995176 . + 0 ID=cds2629;Parent=gene2708;Dbxref=Genbank:WP_011192680.1;Name=WP_011192680.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_011192680.1;transl_table=11 NC_010634.1 RefSeq gene 2995345 2995632 . + . ID=gene2709;Name=YPTS_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13585;old_locus_tag=YPTS_2695 NC_010634.1 Protein Homology CDS 2995345 2995632 . + 0 ID=cds2630;Parent=gene2709;Dbxref=Genbank:WP_002264679.1;Name=WP_002264679.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002264679.1;transl_table=11 NC_010634.1 RefSeq gene 2995645 2996901 . + . ID=gene2710;Name=YPTS_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13590;old_locus_tag=YPTS_2696 NC_010634.1 Protein Homology CDS 2995645 2996901 . + 0 ID=cds2631;Parent=gene2710;Dbxref=Genbank:WP_002222248.1;Name=WP_002222248.1;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;protein_id=WP_002222248.1;transl_table=11 NC_010634.1 RefSeq gene 2997018 2997566 . - . ID=gene2711;Name=YPTS_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13595;old_locus_tag=YPTS_2697 NC_010634.1 Protein Homology CDS 2997018 2997566 . - 0 ID=cds2632;Parent=gene2711;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11 NC_010634.1 RefSeq gene 2997788 2998339 . - . ID=gene2712;Name=YPTS_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13600;old_locus_tag=YPTS_2698 NC_010634.1 Protein Homology CDS 2997788 2998339 . - 0 ID=cds2633;Parent=gene2712;Dbxref=Genbank:WP_002264676.1;Name=WP_002264676.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002264676.1;transl_table=11 NC_010634.1 RefSeq gene 2998527 2999219 . - . ID=gene2713;Name=YPTS_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13605;old_locus_tag=YPTS_2699 NC_010634.1 Protein Homology CDS 2998527 2999219 . - 0 ID=cds2634;Parent=gene2713;Dbxref=Genbank:WP_012303928.1;Name=WP_012303928.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_012303928.1;transl_table=11 NC_010634.1 RefSeq gene 2999573 3000481 . + . ID=gene2714;Name=YPTS_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13610;old_locus_tag=YPTS_2700 NC_010634.1 Protein Homology CDS 2999573 3000481 . + 0 ID=cds2635;Parent=gene2714;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11 NC_010634.1 RefSeq gene 3000605 3001402 . - . ID=gene2715;Name=YPTS_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13615;old_locus_tag=YPTS_2701 NC_010634.1 Protein Homology CDS 3000605 3001402 . - 0 ID=cds2636;Parent=gene2715;Dbxref=Genbank:WP_011192682.1;Name=WP_011192682.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_011192682.1;transl_table=11 NC_010634.1 RefSeq gene 3001416 3002132 . - . ID=gene2716;Name=YPTS_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13620;old_locus_tag=YPTS_2702 NC_010634.1 Protein Homology CDS 3001416 3002132 . - 0 ID=cds2637;Parent=gene2716;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11 NC_010634.1 RefSeq gene 3002129 3002815 . - . ID=gene2717;Name=YPTS_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13625;old_locus_tag=YPTS_2703 NC_010634.1 Protein Homology CDS 3002129 3002815 . - 0 ID=cds2638;Parent=gene2717;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NC_010634.1 RefSeq gene 3002911 3003693 . - . ID=gene2718;Name=YPTS_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13630;old_locus_tag=YPTS_2704 NC_010634.1 Protein Homology CDS 3002911 3003693 . - 0 ID=cds2639;Parent=gene2718;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11 NC_010634.1 RefSeq gene 3004245 3004817 . - . ID=gene2719;Name=YPTS_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13635;old_locus_tag=YPTS_2706 NC_010634.1 Protein Homology CDS 3004245 3004817 . - 0 ID=cds2640;Parent=gene2719;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11 NC_010634.1 RefSeq gene 3005064 3006581 . - . ID=gene2720;Name=YPTS_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13640;old_locus_tag=YPTS_2707 NC_010634.1 Protein Homology CDS 3005064 3006581 . - 0 ID=cds2641;Parent=gene2720;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NC_010634.1 RefSeq gene 3006594 3007103 . - . ID=gene2721;Name=YPTS_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13645;old_locus_tag=YPTS_2708 NC_010634.1 Protein Homology CDS 3006594 3007103 . - 0 ID=cds2642;Parent=gene2721;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NC_010634.1 RefSeq gene 3007400 3008122 . - . ID=gene2722;Name=YPTS_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13650;old_locus_tag=YPTS_2709 NC_010634.1 Protein Homology CDS 3007400 3008122 . - 0 ID=cds2643;Parent=gene2722;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NC_010634.1 RefSeq gene 3008242 3009546 . - . ID=gene2723;Name=YPTS_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13655;old_locus_tag=YPTS_2710 NC_010634.1 Protein Homology CDS 3008242 3009546 . - 0 ID=cds2644;Parent=gene2723;Dbxref=Genbank:WP_002209730.1;Name=WP_002209730.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NC_010634.1 RefSeq gene 3009795 3010709 . - . ID=gene2724;Name=YPTS_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13660;old_locus_tag=YPTS_2711 NC_010634.1 Protein Homology CDS 3009795 3010709 . - 0 ID=cds2645;Parent=gene2724;Dbxref=Genbank:WP_002209729.1;Name=WP_002209729.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NC_010634.1 RefSeq gene 3010940 3011602 . - . ID=gene2725;Name=YPTS_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13665;old_locus_tag=YPTS_2712 NC_010634.1 Protein Homology CDS 3010940 3011602 . - 0 ID=cds2646;Parent=gene2725;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11 NC_010634.1 RefSeq gene 3011759 3012589 . - . ID=gene2726;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=YPTS_RS13670;old_locus_tag=YPTS_2713 NC_010634.1 Protein Homology CDS 3011759 3012589 . - 0 ID=cds2647;Parent=gene2726;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11 NC_010634.1 RefSeq gene 3012658 3013668 . - . ID=gene2727;Name=YPTS_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13675;old_locus_tag=YPTS_2714 NC_010634.1 Protein Homology CDS 3012658 3013668 . - 0 ID=cds2648;Parent=gene2727;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NC_010634.1 RefSeq gene 3013838 3014965 . - . ID=gene2728;Name=YPTS_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13680;old_locus_tag=YPTS_2715 NC_010634.1 Protein Homology CDS 3013838 3014965 . - 0 ID=cds2649;Parent=gene2728;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11 NC_010634.1 RefSeq gene 3015012 3015797 . - . ID=gene2729;Name=YPTS_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13685;old_locus_tag=YPTS_2716 NC_010634.1 Protein Homology CDS 3015012 3015797 . - 0 ID=cds2650;Parent=gene2729;Dbxref=Genbank:WP_011192684.1;Name=WP_011192684.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011192684.1;transl_table=11 NC_010634.1 RefSeq gene 3015784 3015903 . - . ID=gene2730;Name=YPTS_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13690 NC_010634.1 Protein Homology CDS 3015784 3015903 . - 0 ID=cds2651;Parent=gene2730;Dbxref=Genbank:WP_041175462.1;Name=WP_041175462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175462.1;transl_table=11 NC_010634.1 RefSeq gene 3015981 3016898 . + . ID=gene2731;Name=YPTS_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13695;old_locus_tag=YPTS_2717 NC_010634.1 Protein Homology CDS 3015981 3016898 . + 0 ID=cds2652;Parent=gene2731;Dbxref=Genbank:WP_012413813.1;Name=WP_012413813.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_012413813.1;transl_table=11 NC_010634.1 RefSeq gene 3017183 3018220 . + . ID=gene2732;Name=YPTS_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13700;old_locus_tag=YPTS_2718 NC_010634.1 Protein Homology CDS 3017183 3018220 . + 0 ID=cds2653;Parent=gene2732;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3018561 3019728 . + . ID=id191;gbkey=repeat_region NC_010634.1 RefSeq gene 3018562 3019092 . - . ID=gene2733;Name=YPTS_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13705;old_locus_tag=YPTS_2719 NC_010634.1 Protein Homology CDS 3018562 3019092 . - 0 ID=cds2654;Parent=gene2733;Dbxref=Genbank:WP_011192686.1;Name=WP_011192686.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_011192686.1;transl_table=11 NC_010634.1 RefSeq gene 3019883 3020575 . + . ID=gene2734;Name=YPTS_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13710;old_locus_tag=YPTS_2720 NC_010634.1 Protein Homology CDS 3019883 3020575 . + 0 ID=cds2655;Parent=gene2734;Dbxref=Genbank:WP_002209718.1;Name=WP_002209718.1;gbkey=CDS;product=racemase;protein_id=WP_002209718.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3020746 3020920 . + . ID=id192;gbkey=repeat_region NC_010634.1 RefSeq gene 3020983 3022206 . - . ID=gene2735;Name=YPTS_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13715;old_locus_tag=YPTS_2721 NC_010634.1 Protein Homology CDS 3020983 3022206 . - 0 ID=cds2656;Parent=gene2735;Dbxref=Genbank:WP_011192688.1;Name=WP_011192688.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_011192688.1;transl_table=11 NC_010634.1 RefSeq gene 3022378 3024447 . + . ID=gene2736;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=YPTS_RS13720;old_locus_tag=YPTS_2722 NC_010634.1 Protein Homology CDS 3022378 3024447 . + 0 ID=cds2657;Parent=gene2736;Dbxref=Genbank:WP_011192689.1;Name=WP_011192689.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_011192689.1;transl_table=11 NC_010634.1 RefSeq gene 3024749 3025027 . - . ID=gene2737;Name=YPTS_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13725;old_locus_tag=YPTS_2723 NC_010634.1 Protein Homology CDS 3024749 3025027 . - 0 ID=cds2658;Parent=gene2737;Dbxref=Genbank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209715.1;transl_table=11 NC_010634.1 RefSeq gene 3025085 3025627 . - . ID=gene2738;Name=YPTS_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13730;old_locus_tag=YPTS_2724 NC_010634.1 Protein Homology CDS 3025085 3025627 . - 0 ID=cds2659;Parent=gene2738;Dbxref=Genbank:WP_011192690.1;Name=WP_011192690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192690.1;transl_table=11 NC_010634.1 RefSeq gene 3025727 3026533 . - . ID=gene2739;Name=YPTS_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13735;old_locus_tag=YPTS_2725 NC_010634.1 Protein Homology CDS 3025727 3026533 . - 0 ID=cds2660;Parent=gene2739;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11 NC_010634.1 RefSeq gene 3026537 3027364 . - . ID=gene2740;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YPTS_RS13740;old_locus_tag=YPTS_2726 NC_010634.1 Protein Homology CDS 3026537 3027364 . - 0 ID=cds2661;Parent=gene2740;Dbxref=Genbank:WP_002225365.1;Name=WP_002225365.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11 NC_010634.1 RefSeq gene 3027370 3028455 . - . ID=gene2741;Name=YPTS_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13745;old_locus_tag=YPTS_2727 NC_010634.1 Protein Homology CDS 3027370 3028455 . - 0 ID=cds2662;Parent=gene2741;Dbxref=Genbank:WP_011192692.1;Name=WP_011192692.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_011192692.1;transl_table=11 NC_010634.1 RefSeq gene 3028532 3029464 . - . ID=gene2742;Name=YPTS_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13750;old_locus_tag=YPTS_2728 NC_010634.1 Protein Homology CDS 3028532 3029464 . - 0 ID=cds2663;Parent=gene2742;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NC_010634.1 RefSeq gene 3029834 3030364 . + . ID=gene2743;Name=YPTS_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13755;old_locus_tag=YPTS_2729 NC_010634.1 Protein Homology CDS 3029834 3030364 . + 0 ID=cds2664;Parent=gene2743;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11 NC_010634.1 RefSeq gene 3030646 3031137 . - . ID=gene2744;Name=YPTS_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13760;old_locus_tag=YPTS_2730 NC_010634.1 Protein Homology CDS 3030646 3031137 . - 0 ID=cds2665;Parent=gene2744;Dbxref=Genbank:WP_002209707.1;Name=WP_002209707.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_002209707.1;transl_table=11 NC_010634.1 RefSeq gene 3031736 3034078 . - . ID=gene2745;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YPTS_RS13765;old_locus_tag=YPTS_2733 NC_010634.1 Protein Homology CDS 3031736 3034078 . - 0 ID=cds2666;Parent=gene2745;Dbxref=Genbank:WP_011192694.1;Name=WP_011192694.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty-acid oxidation protein subunit alpha;protein_id=WP_011192694.1;transl_table=11 NC_010634.1 RefSeq gene 3034078 3035388 . - . ID=gene2746;Name=YPTS_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13770;old_locus_tag=YPTS_2734 NC_010634.1 Protein Homology CDS 3034078 3035388 . - 0 ID=cds2667;Parent=gene2746;Dbxref=Genbank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_002209704.1;transl_table=11 NC_010634.1 RefSeq gene 3035675 3035959 . - . ID=gene2747;Name=YPTS_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13775;old_locus_tag=YPTS_2735 NC_010634.1 Protein Homology CDS 3035675 3035959 . - 0 ID=cds2668;Parent=gene2747;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11 NC_010634.1 RefSeq gene 3036385 3037650 . + . ID=gene2748;Name=YPTS_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13780;old_locus_tag=YPTS_2736 NC_010634.1 Protein Homology CDS 3036385 3037650 . + 0 ID=cds2669;Parent=gene2748;Dbxref=Genbank:WP_012413815.1;Name=WP_012413815.1;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=WP_012413815.1;transl_table=11 NC_010634.1 RefSeq gene 3037757 3038521 . - . ID=gene2749;Name=YPTS_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13785;old_locus_tag=YPTS_2737 NC_010634.1 Protein Homology CDS 3037757 3038521 . - 0 ID=cds2670;Parent=gene2749;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11 NC_010634.1 RefSeq gene 3038557 3039783 . - . ID=gene2750;Name=YPTS_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13790;old_locus_tag=YPTS_2738 NC_010634.1 Protein Homology CDS 3038557 3039783 . - 0 ID=cds2671;Parent=gene2750;Dbxref=Genbank:WP_011192696.1;Name=WP_011192696.1;gbkey=CDS;product=cytochrome C;protein_id=WP_011192696.1;transl_table=11 NC_010634.1 RefSeq gene 3039783 3040295 . - . ID=gene2751;Name=YPTS_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13795;old_locus_tag=YPTS_2739 NC_010634.1 Protein Homology CDS 3039783 3040295 . - 0 ID=cds2672;Parent=gene2751;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NC_010634.1 RefSeq gene 3040292 3040858 . - . ID=gene2752;Name=YPTS_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13800;old_locus_tag=YPTS_2740 NC_010634.1 Protein Homology CDS 3040292 3040858 . - 0 ID=cds2673;Parent=gene2752;Dbxref=Genbank:WP_002209699.1;Name=WP_002209699.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=WP_002209699.1;transl_table=11 NC_010634.1 RefSeq gene 3040855 3042825 . - . ID=gene2753;Name=YPTS_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13805;old_locus_tag=YPTS_2741 NC_010634.1 Protein Homology CDS 3040855 3042825 . - 0 ID=cds2674;Parent=gene2753;Dbxref=Genbank:WP_011192697.1;Name=WP_011192697.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=heme lyase subunit CcmF;protein_id=WP_011192697.1;transl_table=11 NC_010634.1 RefSeq gene 3042822 3043316 . - . ID=gene2754;Name=YPTS_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13810;old_locus_tag=YPTS_2742 NC_010634.1 Protein Homology CDS 3042822 3043316 . - 0 ID=cds2675;Parent=gene2754;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11 NC_010634.1 RefSeq gene 3043313 3043663 . - . ID=gene2755;Name=YPTS_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13815;old_locus_tag=YPTS_2743 NC_010634.1 Protein Homology CDS 3043313 3043663 . - 0 ID=cds2676;Parent=gene2755;Dbxref=Genbank:WP_011192698.1;Name=WP_011192698.1;gbkey=CDS;product=hemagglutination activity protein;protein_id=WP_011192698.1;transl_table=11 NC_010634.1 RefSeq gene 3043660 3044397 . - . ID=gene2756;Name=YPTS_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13820;old_locus_tag=YPTS_2744 NC_010634.1 Protein Homology CDS 3043660 3044397 . - 0 ID=cds2677;Parent=gene2756;Dbxref=Genbank:WP_011192699.1;Name=WP_011192699.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme ABC transporter permease;protein_id=WP_011192699.1;transl_table=11 NC_010634.1 RefSeq gene 3044460 3045119 . - . ID=gene2757;Name=YPTS_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13825;old_locus_tag=YPTS_2745 NC_010634.1 Protein Homology CDS 3044460 3045119 . - 0 ID=cds2678;Parent=gene2757;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11 NC_010634.1 RefSeq gene 3045089 3045745 . - . ID=gene2758;Name=YPTS_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13830;old_locus_tag=YPTS_2746 NC_010634.1 Protein Homology CDS 3045089 3045745 . - 0 ID=cds2679;Parent=gene2758;Dbxref=Genbank:WP_011192700.1;Name=WP_011192700.1;gbkey=CDS;product=cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=WP_011192700.1;transl_table=11 NC_010634.1 RefSeq gene 3046190 3046657 . - . ID=gene2759;Name=YPTS_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13835;old_locus_tag=YPTS_2747 NC_010634.1 Protein Homology CDS 3046190 3046657 . - 0 ID=cds2680;Parent=gene2759;Dbxref=Genbank:WP_011192701.1;Name=WP_011192701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192701.1;transl_table=11 NC_010634.1 RefSeq gene 3046913 3046987 . - . ID=gene2760;Name=YPTS_RS13840;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS13840;old_locus_tag=YPTS_R0065 NC_010634.1 tRNAscan-SE tRNA 3046913 3046987 . - . ID=rna72;Parent=gene2760;anticodon=(pos:complement(3046952..3046954));gbkey=tRNA;product=tRNA-Arg NC_010634.1 tRNAscan-SE exon 3046913 3046987 . - . ID=id193;Parent=rna72;anticodon=(pos:complement(3046952..3046954));gbkey=tRNA;product=tRNA-Arg NC_010634.1 RefSeq gene 3047274 3047816 . + . ID=gene2761;Name=YPTS_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13845;old_locus_tag=YPTS_2748 NC_010634.1 Protein Homology CDS 3047274 3047816 . + 0 ID=cds2681;Parent=gene2761;Dbxref=Genbank:WP_002209691.1;Name=WP_002209691.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209691.1;transl_table=11 NC_010634.1 RefSeq gene 3047821 3049860 . + . ID=gene2762;Name=YPTS_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13850;old_locus_tag=YPTS_2749 NC_010634.1 Protein Homology CDS 3047821 3049860 . + 0 ID=cds2682;Parent=gene2762;Dbxref=Genbank:WP_012413816.1;Name=WP_012413816.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413816.1;transl_table=11 NC_010634.1 RefSeq gene 3050236 3050577 . + . ID=gene2763;Name=YPTS_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13855;old_locus_tag=YPTS_2750 NC_010634.1 Protein Homology CDS 3050236 3050577 . + 0 ID=cds2683;Parent=gene2763;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11 NC_010634.1 RefSeq gene 3050652 3050999 . - . ID=gene2764;Name=YPTS_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13860;old_locus_tag=YPTS_2751 NC_010634.1 Protein Homology CDS 3050652 3050999 . - 0 ID=cds2684;Parent=gene2764;Dbxref=Genbank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209687.1;transl_table=11 NC_010634.1 RefSeq gene 3051024 3051503 . - . ID=gene2765;Name=YPTS_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13865;old_locus_tag=YPTS_2752 NC_010634.1 Protein Homology CDS 3051024 3051503 . - 0 ID=cds2685;Parent=gene2765;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11 NC_010634.1 RefSeq gene 3051568 3052374 . - . ID=gene2766;Name=YPTS_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13870;old_locus_tag=YPTS_2753 NC_010634.1 Protein Homology CDS 3051568 3052374 . - 0 ID=cds2686;Parent=gene2766;Dbxref=Genbank:WP_011192703.1;Name=WP_011192703.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192703.1;transl_table=11 NC_010634.1 RefSeq gene 3052394 3053236 . - . ID=gene2767;Name=YPTS_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13875;old_locus_tag=YPTS_2754 NC_010634.1 Protein Homology CDS 3052394 3053236 . - 0 ID=cds2687;Parent=gene2767;Dbxref=Genbank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354537.1;transl_table=11 NC_010634.1 RefSeq gene 3053242 3053502 . - . ID=gene2768;Name=YPTS_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13880;old_locus_tag=YPTS_2755 NC_010634.1 Protein Homology CDS 3053242 3053502 . - 0 ID=cds2688;Parent=gene2768;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3053643 3053904 . + . ID=id194;gbkey=repeat_region NC_010634.1 RefSeq gene 3053790 3056531 . - . ID=gene2769;Name=YPTS_RS13885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS13885;old_locus_tag=YPTS_2756;partial=true;pseudo=true;start_range=.,3053790 NC_010634.1 Protein Homology CDS 3053790 3056531 . - 0 ID=cds2689;Parent=gene2769;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,3053790;transl_table=11 NC_010634.1 RefSeq repeat_region 3054079 3054336 . + . ID=id195;gbkey=repeat_region NC_010634.1 RefSeq gene 3056858 3060685 . - . ID=gene2770;Name=YPTS_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13890;old_locus_tag=YPTS_2757 NC_010634.1 Protein Homology CDS 3056858 3060685 . - 0 ID=cds2690;Parent=gene2770;Dbxref=Genbank:WP_011192705.1;Name=WP_011192705.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_011192705.1;transl_table=11 NC_010634.1 RefSeq gene 3060694 3062070 . - . ID=gene2771;Name=YPTS_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13895;old_locus_tag=YPTS_2758 NC_010634.1 Protein Homology CDS 3060694 3062070 . - 0 ID=cds2691;Parent=gene2771;Dbxref=Genbank:WP_011192706.1;Name=WP_011192706.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192706.1;transl_table=11 NC_010634.1 RefSeq gene 3062067 3063416 . - . ID=gene2772;Name=YPTS_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13900;old_locus_tag=YPTS_2759 NC_010634.1 Protein Homology CDS 3062067 3063416 . - 0 ID=cds2692;Parent=gene2772;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11 NC_010634.1 RefSeq gene 3063420 3063959 . - . ID=gene2773;Name=YPTS_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13905;old_locus_tag=YPTS_2760 NC_010634.1 Protein Homology CDS 3063420 3063959 . - 0 ID=cds2693;Parent=gene2773;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11 NC_010634.1 RefSeq gene 3064233 3064718 . - . ID=gene2774;Name=YPTS_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13910;old_locus_tag=YPTS_2761 NC_010634.1 Protein Homology CDS 3064233 3064718 . - 0 ID=cds2694;Parent=gene2774;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NC_010634.1 RefSeq gene 3065051 3066553 . - . ID=gene2775;Name=YPTS_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13915;old_locus_tag=YPTS_2762 NC_010634.1 Protein Homology CDS 3065051 3066553 . - 0 ID=cds2695;Parent=gene2775;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11 NC_010634.1 RefSeq gene 3066577 3067101 . - . ID=gene2776;Name=YPTS_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13920;old_locus_tag=YPTS_2763 NC_010634.1 Protein Homology CDS 3066577 3067101 . - 0 ID=cds2696;Parent=gene2776;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11 NC_010634.1 RefSeq gene 3067207 3067815 . - . ID=gene2777;Name=YPTS_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13925;old_locus_tag=YPTS_2764 NC_010634.1 Protein Homology CDS 3067207 3067815 . - 0 ID=cds2697;Parent=gene2777;Dbxref=Genbank:WP_011192708.1;Name=WP_011192708.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192708.1;transl_table=11 NC_010634.1 RefSeq gene 3067800 3069002 . - . ID=gene2778;Name=YPTS_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13930 NC_010634.1 Protein Homology CDS 3067800 3069002 . - 0 ID=cds2698;Parent=gene2778;Dbxref=Genbank:WP_042592927.1;Name=WP_042592927.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_042592927.1;transl_table=11 NC_010634.1 RefSeq gene 3068934 3070472 . - . ID=gene2779;Name=YPTS_RS13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS13935;partial=true;pseudo=true;start_range=.,3068934 NC_010634.1 Protein Homology CDS 3068934 3070472 . - 0 ID=cds2699;Parent=gene2779;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=fimbrial protein;pseudo=true;start_range=.,3068934;transl_table=11 NC_010634.1 RefSeq gene 3070600 3071361 . - . ID=gene2780;Name=YPTS_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13940;old_locus_tag=YPTS_2766 NC_010634.1 Protein Homology CDS 3070600 3071361 . - 0 ID=cds2700;Parent=gene2780;Dbxref=Genbank:WP_012413819.1;Name=WP_012413819.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_012413819.1;transl_table=11 NC_010634.1 RefSeq gene 3071518 3072063 . - . ID=gene2781;Name=YPTS_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13945;old_locus_tag=YPTS_2767 NC_010634.1 Protein Homology CDS 3071518 3072063 . - 0 ID=cds2701;Parent=gene2781;Dbxref=Genbank:WP_011192710.1;Name=WP_011192710.1;gbkey=CDS;product=frimbrial protein;protein_id=WP_011192710.1;transl_table=11 NC_010634.1 RefSeq gene 3072274 3074931 . - . ID=gene2782;Name=YPTS_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13950;old_locus_tag=YPTS_2768 NC_010634.1 Protein Homology CDS 3072274 3074931 . - 0 ID=cds2702;Parent=gene2782;Dbxref=Genbank:WP_011192711.1;Name=WP_011192711.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_011192711.1;transl_table=11 NC_010634.1 RefSeq gene 3075715 3077595 . + . ID=gene2783;Name=YPTS_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13955;old_locus_tag=YPTS_2769 NC_010634.1 Protein Homology CDS 3075715 3077595 . + 0 ID=cds2703;Parent=gene2783;Dbxref=Genbank:WP_041175570.1;Name=WP_041175570.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_041175570.1;transl_table=11 NC_010634.1 RefSeq gene 3077595 3078620 . + . ID=gene2784;Name=YPTS_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13960;old_locus_tag=YPTS_2770 NC_010634.1 Protein Homology CDS 3077595 3078620 . + 0 ID=cds2704;Parent=gene2784;Dbxref=Genbank:WP_011192712.1;Name=WP_011192712.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011192712.1;transl_table=11 NC_010634.1 RefSeq gene 3078719 3079912 . + . ID=gene2785;Name=YPTS_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13965;old_locus_tag=YPTS_2771 NC_010634.1 Protein Homology CDS 3078719 3079912 . + 0 ID=cds2705;Parent=gene2785;Dbxref=Genbank:WP_011192713.1;Name=WP_011192713.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192713.1;transl_table=11 NC_010634.1 RefSeq gene 3079919 3080950 . + . ID=gene2786;Name=YPTS_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13970;old_locus_tag=YPTS_2772 NC_010634.1 Protein Homology CDS 3079919 3080950 . + 0 ID=cds2706;Parent=gene2786;Dbxref=Genbank:WP_011192714.1;Name=WP_011192714.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192714.1;transl_table=11 NC_010634.1 RefSeq gene 3080990 3082327 . + . ID=gene2787;Name=YPTS_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13975;old_locus_tag=YPTS_2773 NC_010634.1 Protein Homology CDS 3080990 3082327 . + 0 ID=cds2707;Parent=gene2787;Dbxref=Genbank:WP_011192715.1;Name=WP_011192715.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_011192715.1;transl_table=11 NC_010634.1 RefSeq gene 3082324 3083025 . + . ID=gene2788;Name=YPTS_RS13980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS13980;pseudo=true NC_010634.1 Protein Homology CDS 3082324 3083025 . + 0 ID=cds2708;Parent=gene2788;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3082810..3082812%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 3083026 3084708 . + . ID=gene2789;Name=YPTS_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13985;old_locus_tag=YPTS_2776 NC_010634.1 Protein Homology CDS 3083026 3084708 . + 0 ID=cds2709;Parent=gene2789;Dbxref=Genbank:WP_012413821.1;Name=WP_012413821.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413821.1;transl_table=11 NC_010634.1 RefSeq gene 3084705 3085187 . + . ID=gene2790;Name=YPTS_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13990;old_locus_tag=YPTS_2777 NC_010634.1 Protein Homology CDS 3084705 3085187 . + 0 ID=cds2710;Parent=gene2790;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11 NC_010634.1 RefSeq gene 3085560 3086162 . - . ID=gene2791;Name=YPTS_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS13995;old_locus_tag=YPTS_2778 NC_010634.1 Protein Homology CDS 3085560 3086162 . - 0 ID=cds2711;Parent=gene2791;Dbxref=Genbank:WP_011192718.1;Name=WP_011192718.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_011192718.1;transl_table=11 NC_010634.1 RefSeq gene 3087410 3088504 . - . ID=gene2792;Name=YPTS_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14000;old_locus_tag=YPTS_2779 NC_010634.1 Protein Homology CDS 3087410 3088504 . - 0 ID=cds2712;Parent=gene2792;Dbxref=Genbank:WP_011192719.1;Name=WP_011192719.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_011192719.1;transl_table=11 NC_010634.1 RefSeq gene 3088833 3089852 . + . ID=gene2793;Name=YPTS_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14005;old_locus_tag=YPTS_2780 NC_010634.1 Protein Homology CDS 3088833 3089852 . + 0 ID=cds2713;Parent=gene2793;Dbxref=Genbank:WP_011192720.1;Name=WP_011192720.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_011192720.1;transl_table=11 NC_010634.1 RefSeq gene 3089907 3091493 . + . ID=gene2794;Name=YPTS_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14010;old_locus_tag=YPTS_2781 NC_010634.1 Protein Homology CDS 3089907 3091493 . + 0 ID=cds2714;Parent=gene2794;Dbxref=Genbank:WP_011192721.1;Name=WP_011192721.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_011192721.1;transl_table=11 NC_010634.1 RefSeq gene 3091490 3092539 . + . ID=gene2795;Name=YPTS_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14015;old_locus_tag=YPTS_2782 NC_010634.1 Protein Homology CDS 3091490 3092539 . + 0 ID=cds2715;Parent=gene2795;Dbxref=Genbank:WP_011192722.1;Name=WP_011192722.1;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_011192722.1;transl_table=11 NC_010634.1 RefSeq gene 3092612 3093136 . - . ID=gene2796;Name=YPTS_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14020;old_locus_tag=YPTS_2783 NC_010634.1 Protein Homology CDS 3092612 3093136 . - 0 ID=cds2716;Parent=gene2796;Dbxref=Genbank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211599.1;transl_table=11 NC_010634.1 RefSeq gene 3093603 3094082 . + . ID=gene2797;Name=YPTS_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14025;old_locus_tag=YPTS_2784 NC_010634.1 Protein Homology CDS 3093603 3094082 . + 0 ID=cds2717;Parent=gene2797;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11 NC_010634.1 RefSeq gene 3094312 3095160 . - . ID=gene2798;Name=YPTS_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14030;old_locus_tag=YPTS_2786 NC_010634.1 Protein Homology CDS 3094312 3095160 . - 0 ID=cds2718;Parent=gene2798;Dbxref=Genbank:WP_011192723.1;Name=WP_011192723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192723.1;transl_table=11 NC_010634.1 RefSeq gene 3095991 3098417 . + . ID=gene2799;Name=YPTS_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14035;old_locus_tag=YPTS_2787 NC_010634.1 Protein Homology CDS 3095991 3098417 . + 0 ID=cds2719;Parent=gene2799;Dbxref=Genbank:WP_011192724.1;Name=WP_011192724.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_011192724.1;transl_table=11 NC_010634.1 RefSeq gene 3098429 3099046 . + . ID=gene2800;Name=YPTS_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14040;old_locus_tag=YPTS_2788 NC_010634.1 Protein Homology CDS 3098429 3099046 . + 0 ID=cds2720;Parent=gene2800;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11 NC_010634.1 RefSeq gene 3099048 3099824 . + . ID=gene2801;Name=YPTS_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14045;old_locus_tag=YPTS_2789 NC_010634.1 Protein Homology CDS 3099048 3099824 . + 0 ID=cds2721;Parent=gene2801;Dbxref=Genbank:WP_011192725.1;Name=WP_011192725.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_011192725.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3099930 3100280 . + . ID=id196;gbkey=repeat_region NC_010634.1 RefSeq gene 3100306 3100902 . + . ID=gene2802;Name=YPTS_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14050;old_locus_tag=YPTS_2790 NC_010634.1 Protein Homology CDS 3100306 3100902 . + 0 ID=cds2722;Parent=gene2802;Dbxref=Genbank:WP_011192726.1;Name=WP_011192726.1;gbkey=CDS;product=nitrate reductase subunit delta;protein_id=WP_011192726.1;transl_table=11 NC_010634.1 RefSeq gene 3100899 3101468 . + . ID=gene2803;Name=YPTS_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14055;old_locus_tag=YPTS_2791 NC_010634.1 Protein Homology CDS 3100899 3101468 . + 0 ID=cds2723;Parent=gene2803;Dbxref=Genbank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_002211606.1;transl_table=11 NC_010634.1 RefSeq gene 3101714 3102370 . - . ID=gene2804;Name=YPTS_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14060;old_locus_tag=YPTS_2792 NC_010634.1 Protein Homology CDS 3101714 3102370 . - 0 ID=cds2724;Parent=gene2804;Dbxref=Genbank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211607.1;transl_table=11 NC_010634.1 RefSeq gene 3102367 3102723 . - . ID=gene2805;Name=YPTS_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14065;old_locus_tag=YPTS_2793 NC_010634.1 Protein Homology CDS 3102367 3102723 . - 0 ID=cds2725;Parent=gene2805;Dbxref=Genbank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215846.1;transl_table=11 NC_010634.1 RefSeq gene 3102750 3103421 . - . ID=gene2806;Name=YPTS_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14070;old_locus_tag=YPTS_2794 NC_010634.1 Protein Homology CDS 3102750 3103421 . - 0 ID=cds2726;Parent=gene2806;Dbxref=Genbank:WP_011192727.1;Name=WP_011192727.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192727.1;transl_table=11 NC_010634.1 RefSeq gene 3104107 3104538 . + . ID=gene2807;Name=YPTS_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14075;old_locus_tag=YPTS_2795 NC_010634.1 Protein Homology CDS 3104107 3104538 . + 0 ID=cds2727;Parent=gene2807;Dbxref=Genbank:WP_011192728.1;Name=WP_011192728.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_011192728.1;transl_table=11 NC_010634.1 RefSeq gene 3104633 3105157 . - . ID=gene2808;Name=YPTS_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14080;old_locus_tag=YPTS_2796 NC_010634.1 Protein Homology CDS 3104633 3105157 . - 0 ID=cds2728;Parent=gene2808;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11 NC_010634.1 RefSeq gene 3105402 3106637 . - . ID=gene2809;Name=YPTS_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14085;old_locus_tag=YPTS_2797 NC_010634.1 Protein Homology CDS 3105402 3106637 . - 0 ID=cds2729;Parent=gene2809;Dbxref=Genbank:WP_002231034.1;Name=WP_002231034.1;gbkey=CDS;product=aspartate aminotransferase;protein_id=WP_002231034.1;transl_table=11 NC_010634.1 RefSeq gene 3106903 3108150 . + . ID=gene2810;Name=YPTS_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14090;old_locus_tag=YPTS_2798 NC_010634.1 Protein Homology CDS 3106903 3108150 . + 0 ID=cds2730;Parent=gene2810;Dbxref=Genbank:WP_012413823.1;Name=WP_012413823.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_012413823.1;transl_table=11 NC_010634.1 RefSeq gene 3108228 3109199 . - . ID=gene2811;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YPTS_RS14095;old_locus_tag=YPTS_2799 NC_010634.1 Protein Homology CDS 3108228 3109199 . - 0 ID=cds2731;Parent=gene2811;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NC_010634.1 RefSeq gene 3109380 3109856 . - . ID=gene2812;Name=YPTS_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14100;old_locus_tag=YPTS_2800 NC_010634.1 Protein Homology CDS 3109380 3109856 . - 0 ID=cds2732;Parent=gene2812;Dbxref=Genbank:WP_012413824.1;Name=WP_012413824.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_012413824.1;transl_table=11 NC_010634.1 RefSeq gene 3109959 3110837 . + . ID=gene2813;Name=YPTS_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14105;old_locus_tag=YPTS_2801 NC_010634.1 Protein Homology CDS 3109959 3110837 . + 0 ID=cds2733;Parent=gene2813;Dbxref=Genbank:WP_002211617.1;Name=WP_002211617.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211617.1;transl_table=11 NC_010634.1 RefSeq gene 3110973 3111962 . + . ID=gene2814;Name=YPTS_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14110;old_locus_tag=YPTS_2802 NC_010634.1 Protein Homology CDS 3110973 3111962 . + 0 ID=cds2734;Parent=gene2814;Dbxref=Genbank:WP_011192731.1;Name=WP_011192731.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_011192731.1;transl_table=11 NC_010634.1 RefSeq gene 3112232 3112546 . + . ID=gene2815;Name=YPTS_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14115 NC_010634.1 Protein Homology CDS 3112232 3112546 . + 0 ID=cds2735;Parent=gene2815;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11 NC_010634.1 RefSeq gene 3112639 3113868 . - . ID=gene2816;Name=YPTS_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14120;old_locus_tag=YPTS_2804 NC_010634.1 Protein Homology CDS 3112639 3113868 . - 0 ID=cds2736;Parent=gene2816;Dbxref=Genbank:WP_002211621.1;Name=WP_002211621.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_002211621.1;transl_table=11 NC_010634.1 RefSeq gene 3114319 3115503 . + . ID=gene2817;Name=YPTS_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14125;old_locus_tag=YPTS_2805 NC_010634.1 Protein Homology CDS 3114319 3115503 . + 0 ID=cds2737;Parent=gene2817;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3115529 3115717 . + . ID=id197;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3115889 3115990 . + . ID=id198;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3116131 3116232 . + . ID=id199;gbkey=repeat_region NC_010634.1 RefSeq gene 3116305 3116380 . - . ID=gene2818;Name=YPTS_RS14130;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS14130;old_locus_tag=YPTS_R0064 NC_010634.1 tRNAscan-SE tRNA 3116305 3116380 . - . ID=rna73;Parent=gene2818;anticodon=(pos:complement(3116345..3116347));gbkey=tRNA;product=tRNA-Lys NC_010634.1 tRNAscan-SE exon 3116305 3116380 . - . ID=id200;Parent=rna73;anticodon=(pos:complement(3116345..3116347));gbkey=tRNA;product=tRNA-Lys NC_010634.1 RefSeq gene 3116580 3116655 . - . ID=gene2819;Name=YPTS_RS14135;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS14135;old_locus_tag=YPTS_R0063 NC_010634.1 tRNAscan-SE tRNA 3116580 3116655 . - . ID=rna74;Parent=gene2819;anticodon=(pos:complement(3116620..3116622));gbkey=tRNA;product=tRNA-Val NC_010634.1 tRNAscan-SE exon 3116580 3116655 . - . ID=id201;Parent=rna74;anticodon=(pos:complement(3116620..3116622));gbkey=tRNA;product=tRNA-Val NC_010634.1 RefSeq gene 3116700 3116775 . - . ID=gene2820;Name=YPTS_RS14140;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS14140;old_locus_tag=YPTS_R0062 NC_010634.1 tRNAscan-SE tRNA 3116700 3116775 . - . ID=rna75;Parent=gene2820;anticodon=(pos:complement(3116740..3116742));gbkey=tRNA;product=tRNA-Val NC_010634.1 tRNAscan-SE exon 3116700 3116775 . - . ID=id202;Parent=rna75;anticodon=(pos:complement(3116740..3116742));gbkey=tRNA;product=tRNA-Val NC_010634.1 RefSeq gene 3116812 3116887 . - . ID=gene2821;Name=YPTS_RS14145;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS14145;old_locus_tag=YPTS_R0061 NC_010634.1 tRNAscan-SE tRNA 3116812 3116887 . - . ID=rna76;Parent=gene2821;anticodon=(pos:complement(3116852..3116854));gbkey=tRNA;product=tRNA-Val NC_010634.1 tRNAscan-SE exon 3116812 3116887 . - . ID=id203;Parent=rna76;anticodon=(pos:complement(3116852..3116854));gbkey=tRNA;product=tRNA-Val NC_010634.1 RefSeq gene 3117162 3118577 . + . ID=gene2822;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YPTS_RS14150;old_locus_tag=YPTS_2806 NC_010634.1 Protein Homology CDS 3117162 3118577 . + 0 ID=cds2738;Parent=gene2822;Dbxref=Genbank:WP_011192732.1;Name=WP_011192732.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_011192732.1;transl_table=11 NC_010634.1 RefSeq gene 3118809 3118884 . + . ID=gene2823;Name=YPTS_RS14155;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS14155;old_locus_tag=YPTS_R0044 NC_010634.1 tRNAscan-SE tRNA 3118809 3118884 . + . ID=rna77;Parent=gene2823;anticodon=(pos:3118842..3118844);gbkey=tRNA;product=tRNA-Ala NC_010634.1 tRNAscan-SE exon 3118809 3118884 . + . ID=id204;Parent=rna77;anticodon=(pos:3118842..3118844);gbkey=tRNA;product=tRNA-Ala NC_010634.1 RefSeq gene 3118962 3119037 . + . ID=gene2824;Name=YPTS_RS14160;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS14160;old_locus_tag=YPTS_R0045 NC_010634.1 tRNAscan-SE tRNA 3118962 3119037 . + . ID=rna78;Parent=gene2824;anticodon=(pos:3118995..3118997);gbkey=tRNA;product=tRNA-Ala NC_010634.1 tRNAscan-SE exon 3118962 3119037 . + . ID=id205;Parent=rna78;anticodon=(pos:3118995..3118997);gbkey=tRNA;product=tRNA-Ala NC_010634.1 RefSeq gene 3119230 3119835 . + . ID=gene2825;Name=YPTS_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14165;old_locus_tag=YPTS_2808 NC_010634.1 Protein Homology CDS 3119230 3119835 . + 0 ID=cds2739;Parent=gene2825;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11 NC_010634.1 RefSeq gene 3119967 3120314 . + . ID=gene2826;Name=YPTS_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14170;old_locus_tag=YPTS_2809 NC_010634.1 Protein Homology CDS 3119967 3120314 . + 0 ID=cds2740;Parent=gene2826;Dbxref=Genbank:WP_011192734.1;Name=WP_011192734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192734.1;transl_table=11 NC_010634.1 RefSeq gene 3120415 3120630 . - . ID=gene2827;Name=YPTS_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14175;old_locus_tag=YPTS_2810 NC_010634.1 Protein Homology CDS 3120415 3120630 . - 0 ID=cds2741;Parent=gene2827;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11 NC_010634.1 RefSeq gene 3120650 3122662 . - . ID=gene2828;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YPTS_RS14180;old_locus_tag=YPTS_2811 NC_010634.1 Protein Homology CDS 3120650 3122662 . - 0 ID=cds2742;Parent=gene2828;Dbxref=Genbank:WP_011192735.1;Name=WP_011192735.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=WP_011192735.1;transl_table=11 NC_010634.1 RefSeq gene 3122753 3123739 . - . ID=gene2829;Name=YPTS_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14185;old_locus_tag=YPTS_2812 NC_010634.1 Protein Homology CDS 3122753 3123739 . - 0 ID=cds2743;Parent=gene2829;Dbxref=Genbank:WP_002227089.1;Name=WP_002227089.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_002227089.1;transl_table=11 NC_010634.1 RefSeq gene 3123988 3124722 . + . ID=gene2830;Name=YPTS_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14190;old_locus_tag=YPTS_2813 NC_010634.1 Protein Homology CDS 3123988 3124722 . + 0 ID=cds2744;Parent=gene2830;Dbxref=Genbank:WP_002231042.1;Name=WP_002231042.1;gbkey=CDS;product=cysteine biosynthesis protein CysZ;protein_id=WP_002231042.1;transl_table=11 NC_010634.1 RefSeq gene 3124879 3125847 . + . ID=gene2831;Name=YPTS_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14195;old_locus_tag=YPTS_2814 NC_010634.1 Protein Homology CDS 3124879 3125847 . + 0 ID=cds2745;Parent=gene2831;Dbxref=Genbank:WP_011192736.1;Name=WP_011192736.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_011192736.1;transl_table=11 NC_010634.1 RefSeq gene 3126346 3126603 . + . ID=gene2832;Name=YPTS_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14200;old_locus_tag=YPTS_2815 NC_010634.1 Protein Homology CDS 3126346 3126603 . + 0 ID=cds2746;Parent=gene2832;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11 NC_010634.1 RefSeq gene 3126652 3128379 . + . ID=gene2833;Name=YPTS_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14205;old_locus_tag=YPTS_2816 NC_010634.1 Protein Homology CDS 3126652 3128379 . + 0 ID=cds2747;Parent=gene2833;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11 NC_010634.1 RefSeq gene 3128428 3128937 . + . ID=gene2834;Name=YPTS_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14210;old_locus_tag=YPTS_2817 NC_010634.1 Protein Homology CDS 3128428 3128937 . + 0 ID=cds2748;Parent=gene2834;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NC_010634.1 RefSeq gene 3129174 3130523 . - . ID=gene2835;Name=YPTS_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14215;old_locus_tag=YPTS_2818 NC_010634.1 Protein Homology CDS 3129174 3130523 . - 0 ID=cds2749;Parent=gene2835;Dbxref=Genbank:WP_012413825.1;Name=WP_012413825.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_012413825.1;transl_table=11 NC_010634.1 RefSeq gene 3130549 3131232 . - . ID=gene2836;Name=YPTS_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14220;old_locus_tag=YPTS_2819 NC_010634.1 Protein Homology CDS 3130549 3131232 . - 0 ID=cds2750;Parent=gene2836;Dbxref=Genbank:WP_002208494.1;Name=WP_002208494.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208494.1;transl_table=11 NC_010634.1 RefSeq gene 3131420 3132625 . + . ID=gene2837;Name=YPTS_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14225;old_locus_tag=YPTS_2820 NC_010634.1 Protein Homology CDS 3131420 3132625 . + 0 ID=cds2751;Parent=gene2837;Dbxref=Genbank:WP_012303891.1;Name=WP_012303891.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_012303891.1;transl_table=11 NC_010634.1 RefSeq gene 3132629 3134665 . + . ID=gene2838;Name=YPTS_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14230;old_locus_tag=YPTS_2821 NC_010634.1 Protein Homology CDS 3132629 3134665 . + 0 ID=cds2752;Parent=gene2838;Dbxref=Genbank:WP_011192738.1;Name=WP_011192738.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=Macrolide export ATP-binding/permease MacB 2;protein_id=WP_011192738.1;transl_table=11 NC_010634.1 RefSeq gene 3134920 3136566 . - . ID=gene2839;Name=YPTS_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14235;old_locus_tag=YPTS_2822 NC_010634.1 Protein Homology CDS 3134920 3136566 . - 0 ID=cds2753;Parent=gene2839;Dbxref=Genbank:WP_002208497.1;Name=WP_002208497.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_002208497.1;transl_table=11 NC_010634.1 RefSeq gene 3136626 3138086 . - . ID=gene2840;Name=YPTS_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14240;old_locus_tag=YPTS_2823 NC_010634.1 Protein Homology CDS 3136626 3138086 . - 0 ID=cds2754;Parent=gene2840;Dbxref=Genbank:WP_012413826.1;Name=WP_012413826.1;gbkey=CDS;product=sodium:solute symporter;protein_id=WP_012413826.1;transl_table=11 NC_010634.1 RefSeq gene 3138083 3138280 . - . ID=gene2841;Name=YPTS_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14245;old_locus_tag=YPTS_2824 NC_010634.1 Protein Homology CDS 3138083 3138280 . - 0 ID=cds2755;Parent=gene2841;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11 NC_010634.1 RefSeq gene 3138423 3139643 . - . ID=gene2842;Name=YPTS_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14250;old_locus_tag=YPTS_2825 NC_010634.1 Protein Homology CDS 3138423 3139643 . - 0 ID=cds2756;Parent=gene2842;Dbxref=Genbank:WP_011192741.1;Name=WP_011192741.1;gbkey=CDS;product=peptidase M24;protein_id=WP_011192741.1;transl_table=11 NC_010634.1 RefSeq gene 3139677 3140858 . - . ID=gene2843;Name=YPTS_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14255;old_locus_tag=YPTS_2826 NC_010634.1 Protein Homology CDS 3139677 3140858 . - 0 ID=cds2757;Parent=gene2843;Dbxref=Genbank:WP_011192742.1;Name=WP_011192742.1;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_011192742.1;transl_table=11 NC_010634.1 RefSeq gene 3141558 3142976 . + . ID=gene2844;Name=YPTS_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14260;old_locus_tag=YPTS_2827 NC_010634.1 Protein Homology CDS 3141558 3142976 . + 0 ID=cds2758;Parent=gene2844;Dbxref=Genbank:WP_002208502.1;Name=WP_002208502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208502.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3142997 3143165 . + . ID=id206;gbkey=repeat_region NC_010634.1 RefSeq gene 3143221 3144765 . + . ID=gene2845;Name=YPTS_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14265;old_locus_tag=YPTS_2828 NC_010634.1 Protein Homology CDS 3143221 3144765 . + 0 ID=cds2759;Parent=gene2845;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NC_010634.1 RefSeq gene 3144762 3145469 . + . ID=gene2846;Name=YPTS_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14270;old_locus_tag=YPTS_2829 NC_010634.1 Protein Homology CDS 3144762 3145469 . + 0 ID=cds2760;Parent=gene2846;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11 NC_010634.1 RefSeq gene 3145850 3147082 . - . ID=gene2847;Name=YPTS_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14275;old_locus_tag=YPTS_2830 NC_010634.1 Protein Homology CDS 3145850 3147082 . - 0 ID=cds2761;Parent=gene2847;Dbxref=Genbank:WP_012413827.1;Name=WP_012413827.1;gbkey=CDS;product=type III secretion protein GogB;protein_id=WP_012413827.1;transl_table=11 NC_010634.1 RefSeq gene 3147314 3148207 . - . ID=gene2848;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YPTS_RS14280;old_locus_tag=YPTS_2831 NC_010634.1 Protein Homology CDS 3147314 3148207 . - 0 ID=cds2762;Parent=gene2848;Dbxref=Genbank:WP_012413828.1;Name=WP_012413828.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase;protein_id=WP_012413828.1;transl_table=11 NC_010634.1 RefSeq gene 3148378 3149469 . - . ID=gene2849;Name=YPTS_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14285;old_locus_tag=YPTS_2832 NC_010634.1 Protein Homology CDS 3148378 3149469 . - 0 ID=cds2763;Parent=gene2849;Dbxref=Genbank:WP_011192745.1;Name=WP_011192745.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_011192745.1;transl_table=11 NC_010634.1 RefSeq gene 3149459 3150334 . - . ID=gene2850;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YPTS_RS14290;old_locus_tag=YPTS_2833 NC_010634.1 Protein Homology CDS 3149459 3150334 . - 0 ID=cds2764;Parent=gene2850;Dbxref=Genbank:WP_002208510.1;Name=WP_002208510.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_002208510.1;transl_table=11 NC_010634.1 RefSeq gene 3150334 3151167 . - . ID=gene2851;Name=YPTS_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14295;old_locus_tag=YPTS_2834 NC_010634.1 Protein Homology CDS 3150334 3151167 . - 0 ID=cds2765;Parent=gene2851;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11 NC_010634.1 RefSeq gene 3151167 3152204 . - . ID=gene2852;Name=YPTS_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14300;old_locus_tag=YPTS_2835 NC_010634.1 Protein Homology CDS 3151167 3152204 . - 0 ID=cds2766;Parent=gene2852;Dbxref=Genbank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=WP_002208512.1;transl_table=11 NC_010634.1 RefSeq gene 3152537 3154069 . - . ID=gene2853;Name=YPTS_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14305;old_locus_tag=YPTS_2836 NC_010634.1 Protein Homology CDS 3152537 3154069 . - 0 ID=cds2767;Parent=gene2853;Dbxref=Genbank:WP_002231046.1;Name=WP_002231046.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002231046.1;transl_table=11 NC_010634.1 RefSeq gene 3154674 3155552 . - . ID=gene2854;Name=YPTS_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14310;old_locus_tag=YPTS_2837 NC_010634.1 Protein Homology CDS 3154674 3155552 . - 0 ID=cds2768;Parent=gene2854;Dbxref=Genbank:WP_011192747.1;Name=WP_011192747.1;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_011192747.1;transl_table=11 NC_010634.1 RefSeq gene 3155549 3155701 . - . ID=gene2855;Name=YPTS_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14315 NC_010634.1 Protein Homology CDS 3155549 3155701 . - 0 ID=cds2769;Parent=gene2855;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11 NC_010634.1 RefSeq gene 3155741 3156211 . - . ID=gene2856;Name=YPTS_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14320;old_locus_tag=YPTS_2838 NC_010634.1 Protein Homology CDS 3155741 3156211 . - 0 ID=cds2770;Parent=gene2856;Dbxref=Genbank:WP_002208515.1;Name=WP_002208515.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_002208515.1;transl_table=11 NC_010634.1 RefSeq gene 3156293 3157165 . - . ID=gene2857;Name=YPTS_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14325;old_locus_tag=YPTS_2839 NC_010634.1 Protein Homology CDS 3156293 3157165 . - 0 ID=cds2771;Parent=gene2857;Dbxref=Genbank:WP_002208516.1;Name=WP_002208516.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208516.1;transl_table=11 NC_010634.1 RefSeq gene 3157433 3158572 . + . ID=gene2858;Name=YPTS_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14330;old_locus_tag=YPTS_2840 NC_010634.1 Protein Homology CDS 3157433 3158572 . + 0 ID=cds2772;Parent=gene2858;Dbxref=Genbank:WP_011192749.1;Name=WP_011192749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192749.1;transl_table=11 NC_010634.1 RefSeq gene 3158919 3159542 . + . ID=gene2859;Name=YPTS_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14335;old_locus_tag=YPTS_2842 NC_010634.1 Protein Homology CDS 3158919 3159542 . + 0 ID=cds2773;Parent=gene2859;Dbxref=Genbank:WP_024062966.1;Name=WP_024062966.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_024062966.1;transl_table=11 NC_010634.1 RefSeq gene 3159605 3160498 . + . ID=gene2860;Name=YPTS_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14340;old_locus_tag=YPTS_2843 NC_010634.1 Protein Homology CDS 3159605 3160498 . + 0 ID=cds2774;Parent=gene2860;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11 NC_010634.1 RefSeq gene 3160596 3161495 . - . ID=gene2861;Name=YPTS_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14345;old_locus_tag=YPTS_2844 NC_010634.1 Protein Homology CDS 3160596 3161495 . - 0 ID=cds2775;Parent=gene2861;Dbxref=Genbank:WP_011192751.1;Name=WP_011192751.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_011192751.1;transl_table=11 NC_010634.1 RefSeq gene 3161673 3162284 . - . ID=gene2862;Name=YPTS_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14350;old_locus_tag=YPTS_2845 NC_010634.1 Protein Homology CDS 3161673 3162284 . - 0 ID=cds2776;Parent=gene2862;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11 NC_010634.1 RefSeq gene 3162647 3163060 . + . ID=gene2863;Name=YPTS_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14355;old_locus_tag=YPTS_2846 NC_010634.1 Protein Homology CDS 3162647 3163060 . + 0 ID=cds2777;Parent=gene2863;Dbxref=Genbank:WP_012413830.1;Name=WP_012413830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413830.1;transl_table=11 NC_010634.1 RefSeq gene 3163560 3165839 . + . ID=gene2864;Name=YPTS_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14360;old_locus_tag=YPTS_2847 NC_010634.1 Protein Homology CDS 3163560 3165839 . + 0 ID=cds2778;Parent=gene2864;Dbxref=Genbank:WP_012413831.1;Name=WP_012413831.1;gbkey=CDS;product=autotransporter;protein_id=WP_012413831.1;transl_table=11 NC_010634.1 RefSeq gene 3165931 3166347 . - . ID=gene2865;Name=YPTS_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14365;old_locus_tag=YPTS_2848 NC_010634.1 Protein Homology CDS 3165931 3166347 . - 0 ID=cds2779;Parent=gene2865;Dbxref=Genbank:WP_011192753.1;Name=WP_011192753.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192753.1;transl_table=11 NC_010634.1 RefSeq gene 3166453 3166637 . + . ID=gene2866;Name=YPTS_RS14370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS14370;pseudo=true NC_010634.1 Protein Homology CDS 3166453 3166637 . + 0 ID=cds2780;Parent=gene2866;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 3166488 3167001 . + . ID=id207;gbkey=repeat_region NC_010634.1 RefSeq gene 3166818 3167000 . - . ID=gene2867;Name=YPTS_RS14375;end_range=3167000,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS14375;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 3166818 3167000 . - 0 ID=cds2781;Parent=gene2867;end_range=3167000,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=acetyltransferase;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 3167145 3167870 . - . ID=gene2868;Name=YPTS_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14380;old_locus_tag=YPTS_2850 NC_010634.1 Protein Homology CDS 3167145 3167870 . - 0 ID=cds2782;Parent=gene2868;Dbxref=Genbank:WP_011192754.1;Name=WP_011192754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192754.1;transl_table=11 NC_010634.1 RefSeq gene 3167873 3168580 . - . ID=gene2869;Name=YPTS_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14385;old_locus_tag=YPTS_2851 NC_010634.1 Protein Homology CDS 3167873 3168580 . - 0 ID=cds2783;Parent=gene2869;Dbxref=Genbank:WP_011192755.1;Name=WP_011192755.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192755.1;transl_table=11 NC_010634.1 RefSeq gene 3168577 3169239 . - . ID=gene2870;Name=YPTS_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14390;old_locus_tag=YPTS_2852 NC_010634.1 Protein Homology CDS 3168577 3169239 . - 0 ID=cds2784;Parent=gene2870;Dbxref=Genbank:WP_032466931.1;Name=WP_032466931.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466931.1;transl_table=11 NC_010634.1 RefSeq gene 3169330 3169515 . + . ID=gene2871;Name=YPTS_RS14395;end_range=3169515,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS14395;old_locus_tag=YPTS_2853;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 3169330 3169515 . + 0 ID=cds2785;Parent=gene2871;end_range=3169515,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 3169929 3170442 . + . ID=id208;gbkey=repeat_region NC_010634.1 RefSeq gene 3170259 3170684 . - . ID=gene2872;Name=YPTS_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14400;old_locus_tag=YPTS_2855 NC_010634.1 Protein Homology CDS 3170259 3170684 . - 0 ID=cds2786;Parent=gene2872;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NC_010634.1 RefSeq gene 3170966 3171895 . + . ID=gene2873;Name=YPTS_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14405;old_locus_tag=YPTS_2856 NC_010634.1 Protein Homology CDS 3170966 3171895 . + 0 ID=cds2787;Parent=gene2873;Dbxref=Genbank:WP_002208526.1;Name=WP_002208526.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002208526.1;transl_table=11 NC_010634.1 RefSeq gene 3171895 3172353 . + . ID=gene2874;Name=YPTS_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14410;old_locus_tag=YPTS_2857 NC_010634.1 Protein Homology CDS 3171895 3172353 . + 0 ID=cds2788;Parent=gene2874;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3172386 3172512 . + . ID=id209;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3172523 3172649 . + . ID=id210;gbkey=repeat_region NC_010634.1 RefSeq gene 3172658 3174937 . - . ID=gene2875;Name=YPTS_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14415;old_locus_tag=YPTS_2859 NC_010634.1 Protein Homology CDS 3172658 3174937 . - 0 ID=cds2789;Parent=gene2875;Dbxref=Genbank:WP_011192757.1;Name=WP_011192757.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=malic enzyme;protein_id=WP_011192757.1;transl_table=11 NC_010634.1 RefSeq gene 3175256 3175852 . - . ID=gene2876;Name=YPTS_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14420;old_locus_tag=YPTS_2860 NC_010634.1 Protein Homology CDS 3175256 3175852 . - 0 ID=cds2790;Parent=gene2876;Dbxref=Genbank:WP_002208529.1;Name=WP_002208529.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11 NC_010634.1 RefSeq gene 3176035 3176634 . - . ID=gene2877;Name=YPTS_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14425;old_locus_tag=YPTS_2862 NC_010634.1 Protein Homology CDS 3176035 3176634 . - 0 ID=cds2791;Parent=gene2877;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11 NC_010634.1 RefSeq gene 3176662 3177129 . - . ID=gene2878;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YPTS_RS14430;old_locus_tag=YPTS_2863 NC_010634.1 Protein Homology CDS 3176662 3177129 . - 0 ID=cds2792;Parent=gene2878;Dbxref=Genbank:WP_012413837.1;Name=WP_012413837.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_012413837.1;transl_table=11 NC_010634.1 RefSeq gene 3177212 3179704 . - . ID=gene2879;Name=YPTS_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14435;old_locus_tag=YPTS_2864 NC_010634.1 Protein Homology CDS 3177212 3179704 . - 0 ID=cds2793;Parent=gene2879;Dbxref=Genbank:WP_011171900.1;Name=WP_011171900.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_011171900.1;transl_table=11 NC_010634.1 RefSeq gene 3179701 3179967 . - . ID=gene2880;Name=YPTS_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14440;old_locus_tag=YPTS_2865 NC_010634.1 Protein Homology CDS 3179701 3179967 . - 0 ID=cds2794;Parent=gene2880;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11 NC_010634.1 RefSeq gene 3179957 3180460 . - . ID=gene2881;Name=YPTS_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14445;old_locus_tag=YPTS_2866 NC_010634.1 Protein Homology CDS 3179957 3180460 . - 0 ID=cds2795;Parent=gene2881;Dbxref=Genbank:WP_002231048.1;Name=WP_002231048.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002231048.1;transl_table=11 NC_010634.1 RefSeq gene 3181300 3181929 . + . ID=gene2882;Name=YPTS_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14450;old_locus_tag=YPTS_2867 NC_010634.1 Protein Homology CDS 3181300 3181929 . + 0 ID=cds2796;Parent=gene2882;Dbxref=Genbank:WP_002208537.1;Name=WP_002208537.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208537.1;transl_table=11 NC_010634.1 RefSeq gene 3181942 3182220 . - . ID=gene2883;Name=YPTS_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14455;old_locus_tag=YPTS_2868 NC_010634.1 Protein Homology CDS 3181942 3182220 . - 0 ID=cds2797;Parent=gene2883;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11 NC_010634.1 RefSeq gene 3182635 3185766 . + . ID=gene2884;Name=YPTS_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14460;old_locus_tag=YPTS_2869 NC_010634.1 Protein Homology CDS 3182635 3185766 . + 0 ID=cds2798;Parent=gene2884;Dbxref=Genbank:WP_011192758.1;Name=WP_011192758.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_011192758.1;transl_table=11 NC_010634.1 RefSeq gene 3185997 3186581 . + . ID=gene2885;Name=YPTS_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14465;old_locus_tag=YPTS_2870 NC_010634.1 Protein Homology CDS 3185997 3186581 . + 0 ID=cds2799;Parent=gene2885;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NC_010634.1 RefSeq gene 3186870 3187418 . + . ID=gene2886;Name=YPTS_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14470;old_locus_tag=YPTS_2871 NC_010634.1 Protein Homology CDS 3186870 3187418 . + 0 ID=cds2800;Parent=gene2886;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11 NC_010634.1 RefSeq gene 3188165 3189340 . - . ID=gene2887;Name=YPTS_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14475;old_locus_tag=YPTS_2872 NC_010634.1 Protein Homology CDS 3188165 3189340 . - 0 ID=cds2801;Parent=gene2887;Dbxref=Genbank:WP_011192759.1;Name=WP_011192759.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_011192759.1;transl_table=11 NC_010634.1 RefSeq gene 3189398 3191068 . - . ID=gene2888;Name=YPTS_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14480;old_locus_tag=YPTS_2873 NC_010634.1 Protein Homology CDS 3189398 3191068 . - 0 ID=cds2802;Parent=gene2888;Dbxref=Genbank:WP_032466956.1;Name=WP_032466956.1;gbkey=CDS;product=sulfatase;protein_id=WP_032466956.1;transl_table=11 NC_010634.1 RefSeq gene 3191549 3192619 . - . ID=gene2889;Name=YPTS_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14485;old_locus_tag=YPTS_2874 NC_010634.1 Protein Homology CDS 3191549 3192619 . - 0 ID=cds2803;Parent=gene2889;Dbxref=Genbank:WP_011192760.1;Name=WP_011192760.1;gbkey=CDS;product=lipase;protein_id=WP_011192760.1;transl_table=11 NC_010634.1 RefSeq gene 3192612 3194381 . - . ID=gene2890;Name=YPTS_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14490;old_locus_tag=YPTS_2875 NC_010634.1 Protein Homology CDS 3192612 3194381 . - 0 ID=cds2804;Parent=gene2890;Dbxref=Genbank:WP_002231049.1;Name=WP_002231049.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002231049.1;transl_table=11 NC_010634.1 RefSeq gene 3194476 3195564 . - . ID=gene2891;Name=YPTS_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14495;old_locus_tag=YPTS_2876 NC_010634.1 Protein Homology CDS 3194476 3195564 . - 0 ID=cds2805;Parent=gene2891;Dbxref=Genbank:WP_011192761.1;Name=WP_011192761.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_011192761.1;transl_table=11 NC_010634.1 RefSeq gene 3195875 3196348 . + . ID=gene2892;Name=YPTS_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14500;old_locus_tag=YPTS_2877 NC_010634.1 Protein Homology CDS 3195875 3196348 . + 0 ID=cds2806;Parent=gene2892;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11 NC_010634.1 RefSeq gene 3196508 3196906 . + . ID=gene2893;Name=YPTS_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14505;old_locus_tag=YPTS_2878 NC_010634.1 Protein Homology CDS 3196508 3196906 . + 0 ID=cds2807;Parent=gene2893;Dbxref=Genbank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;product=reductase;protein_id=WP_002208548.1;transl_table=11 NC_010634.1 RefSeq gene 3196908 3198035 . + . ID=gene2894;Name=YPTS_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14510;old_locus_tag=YPTS_2879 NC_010634.1 Protein Homology CDS 3196908 3198035 . + 0 ID=cds2808;Parent=gene2894;Dbxref=Genbank:WP_002208549.1;Name=WP_002208549.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NC_010634.1 RefSeq gene 3198032 3198709 . + . ID=gene2895;Name=YPTS_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14515;old_locus_tag=YPTS_2880 NC_010634.1 Protein Homology CDS 3198032 3198709 . + 0 ID=cds2809;Parent=gene2895;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11 NC_010634.1 RefSeq gene 3198777 3198971 . + . ID=gene2896;Name=YPTS_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14520;old_locus_tag=YPTS_2881 NC_010634.1 Protein Homology CDS 3198777 3198971 . + 0 ID=cds2810;Parent=gene2896;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11 NC_010634.1 RefSeq gene 3199225 3201276 . - . ID=gene2897;Name=YPTS_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14525;old_locus_tag=YPTS_2883 NC_010634.1 Protein Homology CDS 3199225 3201276 . - 0 ID=cds2811;Parent=gene2897;Dbxref=Genbank:WP_012413840.1;Name=WP_012413840.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=methionine tRNA cytidine acetyltransferase;protein_id=WP_012413840.1;transl_table=11 NC_010634.1 RefSeq gene 3201278 3201730 . - . ID=gene2898;Name=YPTS_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14530;old_locus_tag=YPTS_2884 NC_010634.1 Protein Homology CDS 3201278 3201730 . - 0 ID=cds2812;Parent=gene2898;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11 NC_010634.1 RefSeq gene 3201824 3202693 . - . ID=gene2899;Name=YPTS_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14535;old_locus_tag=YPTS_2885 NC_010634.1 Protein Homology CDS 3201824 3202693 . - 0 ID=cds2813;Parent=gene2899;Dbxref=Genbank:WP_012413841.1;Name=WP_012413841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413841.1;transl_table=11 NC_010634.1 RefSeq gene 3202912 3203625 . - . ID=gene2900;Name=YPTS_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14540;old_locus_tag=YPTS_2887 NC_010634.1 Protein Homology CDS 3202912 3203625 . - 0 ID=cds2814;Parent=gene2900;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NC_010634.1 RefSeq gene 3203696 3204754 . - . ID=gene2901;Name=YPTS_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14545;old_locus_tag=YPTS_2888 NC_010634.1 Protein Homology CDS 3203696 3204754 . - 0 ID=cds2815;Parent=gene2901;Dbxref=Genbank:WP_011192764.1;Name=WP_011192764.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_011192764.1;transl_table=11 NC_010634.1 RefSeq gene 3204772 3205653 . - . ID=gene2902;Name=YPTS_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14550;old_locus_tag=YPTS_2889 NC_010634.1 Protein Homology CDS 3204772 3205653 . - 0 ID=cds2816;Parent=gene2902;Dbxref=Genbank:WP_032466692.1;Name=WP_032466692.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_032466692.1;transl_table=11 NC_010634.1 RefSeq gene 3205818 3206387 . + . ID=gene2903;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YPTS_RS14555;old_locus_tag=YPTS_2890 NC_010634.1 Protein Homology CDS 3205818 3206387 . + 0 ID=cds2817;Parent=gene2903;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11 NC_010634.1 RefSeq gene 3206390 3206860 . + . ID=gene2904;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YPTS_RS14560;old_locus_tag=YPTS_2891 NC_010634.1 Protein Homology CDS 3206390 3206860 . + 0 ID=cds2818;Parent=gene2904;Dbxref=Genbank:WP_011192766.1;Name=WP_011192766.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_011192766.1;transl_table=11 NC_010634.1 RefSeq gene 3207104 3207523 . - . ID=gene2905;Name=YPTS_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14565;old_locus_tag=YPTS_2892 NC_010634.1 Protein Homology CDS 3207104 3207523 . - 0 ID=cds2819;Parent=gene2905;Dbxref=Genbank:WP_002217563.1;Name=WP_002217563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217563.1;transl_table=11 NC_010634.1 RefSeq gene 3207527 3208222 . - . ID=gene2906;Name=YPTS_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14570;old_locus_tag=YPTS_2893 NC_010634.1 Protein Homology CDS 3207527 3208222 . - 0 ID=cds2820;Parent=gene2906;Dbxref=Genbank:WP_012303872.1;Name=WP_012303872.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303872.1;transl_table=11 NC_010634.1 RefSeq gene 3208560 3208733 . + . ID=gene2907;Name=YPTS_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14575 NC_010634.1 Protein Homology CDS 3208560 3208733 . + 0 ID=cds2821;Parent=gene2907;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11 NC_010634.1 RefSeq gene 3208822 3209886 . - . ID=gene2908;Name=YPTS_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14580;old_locus_tag=YPTS_2894 NC_010634.1 Protein Homology CDS 3208822 3209886 . - 0 ID=cds2822;Parent=gene2908;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11 NC_010634.1 RefSeq gene 3210217 3211701 . + . ID=gene2909;Name=YPTS_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14585;old_locus_tag=YPTS_2895 NC_010634.1 Protein Homology CDS 3210217 3211701 . + 0 ID=cds2823;Parent=gene2909;Dbxref=Genbank:WP_012104832.1;Name=WP_012104832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104832.1;transl_table=11 NC_010634.1 RefSeq gene 3211808 3212164 . + . ID=gene2910;Name=YPTS_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14590;old_locus_tag=YPTS_2896 NC_010634.1 Protein Homology CDS 3211808 3212164 . + 0 ID=cds2824;Parent=gene2910;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11 NC_010634.1 RefSeq gene 3212376 3213083 . - . ID=gene2911;Name=YPTS_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14595;old_locus_tag=YPTS_2897 NC_010634.1 Protein Homology CDS 3212376 3213083 . - 0 ID=cds2825;Parent=gene2911;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NC_010634.1 RefSeq gene 3213342 3214628 . - . ID=gene2912;Name=YPTS_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14600;old_locus_tag=YPTS_2898 NC_010634.1 Protein Homology CDS 3213342 3214628 . - 0 ID=cds2826;Parent=gene2912;Dbxref=Genbank:WP_012413843.1;Name=WP_012413843.1;gbkey=CDS;product=uracil transporter;protein_id=WP_012413843.1;transl_table=11 NC_010634.1 RefSeq gene 3214740 3215366 . - . ID=gene2913;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YPTS_RS14605;old_locus_tag=YPTS_2899 NC_010634.1 Protein Homology CDS 3214740 3215366 . - 0 ID=cds2827;Parent=gene2913;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NC_010634.1 RefSeq gene 3215801 3216844 . + . ID=gene2914;Name=YPTS_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14610;old_locus_tag=YPTS_2900 NC_010634.1 Protein Homology CDS 3215801 3216844 . + 0 ID=cds2828;Parent=gene2914;Dbxref=Genbank:WP_011192770.1;Name=WP_011192770.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_011192770.1;transl_table=11 NC_010634.1 RefSeq gene 3216959 3217597 . + . ID=gene2915;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YPTS_RS14615;old_locus_tag=YPTS_2901 NC_010634.1 Protein Homology CDS 3216959 3217597 . + 0 ID=cds2829;Parent=gene2915;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NC_010634.1 RefSeq gene 3217826 3218371 . + . ID=gene2916;Name=YPTS_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14620;old_locus_tag=YPTS_2902 NC_010634.1 Protein Homology CDS 3217826 3218371 . + 0 ID=cds2830;Parent=gene2916;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NC_010634.1 RefSeq gene 3218465 3219187 . - . ID=gene2917;Name=YPTS_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14625 NC_010634.1 Protein Homology CDS 3218465 3219187 . - 0 ID=cds2831;Parent=gene2917;Dbxref=Genbank:WP_038824445.1;Name=WP_038824445.1;gbkey=CDS;product=N-methylation of lysine residues in flagellin;protein_id=WP_038824445.1;transl_table=11 NC_010634.1 RefSeq gene 3219872 3220684 . - . ID=gene2918;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPTS_RS14630;old_locus_tag=YPTS_2904 NC_010634.1 Protein Homology CDS 3219872 3220684 . - 0 ID=cds2832;Parent=gene2918;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11 NC_010634.1 RefSeq gene 3220712 3222364 . - . ID=gene2919;Name=YPTS_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14635;old_locus_tag=YPTS_2905 NC_010634.1 Protein Homology CDS 3220712 3222364 . - 0 ID=cds2833;Parent=gene2919;Dbxref=Genbank:WP_041175595.1;Name=WP_041175595.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_041175595.1;transl_table=11 NC_010634.1 RefSeq gene 3222424 3224655 . - . ID=gene2920;Name=YPTS_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14640;old_locus_tag=YPTS_2906 NC_010634.1 Protein Homology CDS 3222424 3224655 . - 0 ID=cds2834;Parent=gene2920;Dbxref=Genbank:WP_012413846.1;Name=WP_012413846.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_012413846.1;transl_table=11 NC_010634.1 RefSeq gene 3224926 3226989 . + . ID=gene2921;Name=YPTS_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14645;old_locus_tag=YPTS_2907 NC_010634.1 Protein Homology CDS 3224926 3226989 . + 0 ID=cds2835;Parent=gene2921;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11 NC_010634.1 RefSeq gene 3227000 3228559 . + . ID=gene2922;Name=YPTS_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14650;old_locus_tag=YPTS_2908 NC_010634.1 Protein Homology CDS 3227000 3228559 . + 0 ID=cds2836;Parent=gene2922;Dbxref=Genbank:WP_002209783.1;Name=WP_002209783.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NC_010634.1 RefSeq gene 3228748 3228936 . + . ID=gene2923;Name=YPTS_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14655;old_locus_tag=YPTS_2909 NC_010634.1 Protein Homology CDS 3228748 3228936 . + 0 ID=cds2837;Parent=gene2923;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11 NC_010634.1 RefSeq gene 3228988 3230463 . + . ID=gene2924;Name=YPTS_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14660;old_locus_tag=YPTS_2910 NC_010634.1 Protein Homology CDS 3228988 3230463 . + 0 ID=cds2838;Parent=gene2924;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11 NC_010634.1 RefSeq gene 3230603 3231955 . + . ID=gene2925;Name=YPTS_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14665;old_locus_tag=YPTS_2911 NC_010634.1 Protein Homology CDS 3230603 3231955 . + 0 ID=cds2839;Parent=gene2925;Dbxref=Genbank:WP_012104828.1;Name=WP_012104828.1;gbkey=CDS;product=chaperone;protein_id=WP_012104828.1;transl_table=11 NC_010634.1 RefSeq gene 3232227 3233075 . - . ID=gene2926;Name=YPTS_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14670;old_locus_tag=YPTS_2913 NC_010634.1 Protein Homology CDS 3232227 3233075 . - 0 ID=cds2840;Parent=gene2926;Dbxref=Genbank:WP_002209786.1;Name=WP_002209786.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NC_010634.1 RefSeq gene 3233137 3234402 . - . ID=gene2927;Name=YPTS_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14675;old_locus_tag=YPTS_2914 NC_010634.1 Protein Homology CDS 3233137 3234402 . - 0 ID=cds2841;Parent=gene2927;Dbxref=Genbank:WP_011192776.1;Name=WP_011192776.1;gbkey=CDS;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_011192776.1;transl_table=11 NC_010634.1 RefSeq gene 3234449 3235477 . - . ID=gene2928;Name=YPTS_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14680;old_locus_tag=YPTS_2915 NC_010634.1 Protein Homology CDS 3234449 3235477 . - 0 ID=cds2842;Parent=gene2928;Dbxref=Genbank:WP_011192777.1;Name=WP_011192777.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_011192777.1;transl_table=11 NC_010634.1 RefSeq gene 3235530 3236819 . - . ID=gene2929;Name=YPTS_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14685;old_locus_tag=YPTS_2916 NC_010634.1 Protein Homology CDS 3235530 3236819 . - 0 ID=cds2843;Parent=gene2929;Dbxref=Genbank:WP_012413847.1;Name=WP_012413847.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_012413847.1;transl_table=11 NC_010634.1 RefSeq gene 3237001 3238506 . + . ID=gene2930;Name=YPTS_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14690;old_locus_tag=YPTS_2917 NC_010634.1 Protein Homology CDS 3237001 3238506 . + 0 ID=cds2844;Parent=gene2930;Dbxref=Genbank:WP_011192779.1;Name=WP_011192779.1;gbkey=CDS;product=decarboxylase;protein_id=WP_011192779.1;transl_table=11 NC_010634.1 RefSeq gene 3238889 3239974 . + . ID=gene2931;Name=YPTS_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14695;old_locus_tag=YPTS_2918 NC_010634.1 Protein Homology CDS 3238889 3239974 . + 0 ID=cds2845;Parent=gene2931;Dbxref=Genbank:WP_011192780.1;Name=WP_011192780.1;gbkey=CDS;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=WP_011192780.1;transl_table=11 NC_010634.1 RefSeq gene 3240390 3241724 . + . ID=gene2932;Name=YPTS_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14700;old_locus_tag=YPTS_2919 NC_010634.1 Protein Homology CDS 3240390 3241724 . + 0 ID=cds2846;Parent=gene2932;Dbxref=Genbank:WP_011192781.1;Name=WP_011192781.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_011192781.1;transl_table=11 NC_010634.1 RefSeq gene 3241724 3244882 . + . ID=gene2933;Name=YPTS_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14705;old_locus_tag=YPTS_2920 NC_010634.1 Protein Homology CDS 3241724 3244882 . + 0 ID=cds2847;Parent=gene2933;Dbxref=Genbank:WP_011192782.1;Name=WP_011192782.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_011192782.1;transl_table=11 NC_010634.1 RefSeq gene 3244879 3247953 . + . ID=gene2934;Name=YPTS_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14710;old_locus_tag=YPTS_2921 NC_010634.1 Protein Homology CDS 3244879 3247953 . + 0 ID=cds2848;Parent=gene2934;Dbxref=Genbank:WP_012303861.1;Name=WP_012303861.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_012303861.1;transl_table=11 NC_010634.1 RefSeq gene 3247987 3249384 . + . ID=gene2935;Name=YPTS_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14715;old_locus_tag=YPTS_2922 NC_010634.1 Protein Homology CDS 3247987 3249384 . + 0 ID=cds2849;Parent=gene2935;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11 NC_010634.1 RefSeq gene 3249418 3250800 . + . ID=gene2936;Name=YPTS_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14720;old_locus_tag=YPTS_2923 NC_010634.1 Protein Homology CDS 3249418 3250800 . + 0 ID=cds2850;Parent=gene2936;Dbxref=Genbank:WP_041175596.1;Name=WP_041175596.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_041175596.1;transl_table=11 NC_010634.1 RefSeq gene 3250810 3251529 . + . ID=gene2937;Name=YPTS_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14725;old_locus_tag=YPTS_2924 NC_010634.1 Protein Homology CDS 3250810 3251529 . + 0 ID=cds2851;Parent=gene2937;Dbxref=Genbank:WP_011192786.1;Name=WP_011192786.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_011192786.1;transl_table=11 NC_010634.1 RefSeq gene 3251666 3252004 . + . ID=gene2938;Name=YPTS_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14730;old_locus_tag=YPTS_2925 NC_010634.1 Protein Homology CDS 3251666 3252004 . + 0 ID=cds2852;Parent=gene2938;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11 NC_010634.1 RefSeq gene 3252279 3253673 . + . ID=gene2939;Name=YPTS_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14735;old_locus_tag=YPTS_2926 NC_010634.1 Protein Homology CDS 3252279 3253673 . + 0 ID=cds2853;Parent=gene2939;Dbxref=Genbank:WP_002209798.1;Name=WP_002209798.1;gbkey=CDS;product=protease;protein_id=WP_002209798.1;transl_table=11 NC_010634.1 RefSeq gene 3254310 3255200 . + . ID=gene2940;Name=YPTS_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14740;old_locus_tag=YPTS_2927 NC_010634.1 Protein Homology CDS 3254310 3255200 . + 0 ID=cds2854;Parent=gene2940;Dbxref=Genbank:WP_002209799.1;Name=WP_002209799.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_002209799.1;transl_table=11 NC_010634.1 RefSeq gene 3255487 3255996 . - . ID=gene2941;Name=YPTS_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14745;old_locus_tag=YPTS_2928 NC_010634.1 Protein Homology CDS 3255487 3255996 . - 0 ID=cds2855;Parent=gene2941;Dbxref=Genbank:WP_002209800.1;Name=WP_002209800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209800.1;transl_table=11 NC_010634.1 RefSeq gene 3256227 3257147 . + . ID=gene2942;Name=YPTS_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14750;old_locus_tag=YPTS_2929 NC_010634.1 Protein Homology CDS 3256227 3257147 . + 0 ID=cds2856;Parent=gene2942;Dbxref=Genbank:WP_011192788.1;Name=WP_011192788.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192788.1;transl_table=11 NC_010634.1 RefSeq gene 3257175 3257975 . - . ID=gene2943;Name=YPTS_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14755;old_locus_tag=YPTS_2930 NC_010634.1 Protein Homology CDS 3257175 3257975 . - 0 ID=cds2857;Parent=gene2943;Dbxref=Genbank:WP_011192789.1;Name=WP_011192789.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_011192789.1;transl_table=11 NC_010634.1 RefSeq gene 3258497 3258964 . + . ID=gene2944;Name=YPTS_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14760;old_locus_tag=YPTS_2932 NC_010634.1 Protein Homology CDS 3258497 3258964 . + 0 ID=cds2858;Parent=gene2944;Dbxref=Genbank:WP_012413849.1;Name=WP_012413849.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413849.1;transl_table=11 NC_010634.1 RefSeq gene 3259062 3259943 . + . ID=gene2945;Name=YPTS_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14770 NC_010634.1 Protein Homology CDS 3259062 3259943 . + 0 ID=cds2859;Parent=gene2945;Dbxref=Genbank:WP_042592898.1;Name=WP_042592898.1;gbkey=CDS;product=membrane protein;protein_id=WP_042592898.1;transl_table=11 NC_010634.1 RefSeq gene 3259940 3260335 . + . ID=gene2946;Name=YPTS_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14775;old_locus_tag=YPTS_2934 NC_010634.1 Protein Homology CDS 3259940 3260335 . + 0 ID=cds2860;Parent=gene2946;Dbxref=Genbank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216980.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3260234 3260379 . + . ID=id211;gbkey=repeat_region NC_010634.1 RefSeq gene 3260399 3260794 . + . ID=gene2947;Name=YPTS_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14780;old_locus_tag=YPTS_2935 NC_010634.1 Protein Homology CDS 3260399 3260794 . + 0 ID=cds2861;Parent=gene2947;Dbxref=Genbank:WP_011192792.1;Name=WP_011192792.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192792.1;transl_table=11 NC_010634.1 RefSeq gene 3260856 3261251 . + . ID=gene2948;Name=YPTS_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14785;old_locus_tag=YPTS_2936 NC_010634.1 Protein Homology CDS 3260856 3261251 . + 0 ID=cds2862;Parent=gene2948;Dbxref=Genbank:WP_012413850.1;Name=WP_012413850.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413850.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3261150 3261295 . + . ID=id212;gbkey=repeat_region NC_010634.1 RefSeq gene 3261315 3261713 . + . ID=gene2949;Name=YPTS_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14790 NC_010634.1 Protein Homology CDS 3261315 3261713 . + 0 ID=cds2863;Parent=gene2949;Dbxref=Genbank:WP_011192794.1;Name=WP_011192794.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192794.1;transl_table=11 NC_010634.1 RefSeq gene 3261737 3262216 . + . ID=gene2950;Name=YPTS_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14795;old_locus_tag=YPTS_2939 NC_010634.1 Protein Homology CDS 3261737 3262216 . + 0 ID=cds2864;Parent=gene2950;Dbxref=Genbank:WP_011192795.1;Name=WP_011192795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192795.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3262294 3262426 . + . ID=id213;gbkey=repeat_region NC_010634.1 RefSeq gene 3262495 3264072 . - . ID=gene2951;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YPTS_RS14800;old_locus_tag=YPTS_2940 NC_010634.1 Protein Homology CDS 3262495 3264072 . - 0 ID=cds2865;Parent=gene2951;Dbxref=Genbank:WP_011192796.1;Name=WP_011192796.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_011192796.1;transl_table=11 NC_010634.1 RefSeq gene 3264055 3264180 . + . ID=gene2952;Name=YPTS_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14805 NC_010634.1 Protein Homology CDS 3264055 3264180 . + 0 ID=cds2866;Parent=gene2952;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11 NC_010634.1 RefSeq gene 3264252 3265715 . - . ID=gene2953;Name=YPTS_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14810;old_locus_tag=YPTS_2941 NC_010634.1 Protein Homology CDS 3264252 3265715 . - 0 ID=cds2867;Parent=gene2953;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NC_010634.1 RefSeq gene 3265885 3267264 . + . ID=gene2954;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YPTS_RS14815;old_locus_tag=YPTS_2942 NC_010634.1 Protein Homology CDS 3265885 3267264 . + 0 ID=cds2868;Parent=gene2954;Dbxref=Genbank:WP_011192797.1;Name=WP_011192797.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_011192797.1;transl_table=11 NC_010634.1 RefSeq gene 3267412 3267636 . - . ID=gene2955;Name=YPTS_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14820;old_locus_tag=YPTS_2944 NC_010634.1 Protein Homology CDS 3267412 3267636 . - 0 ID=cds2869;Parent=gene2955;Dbxref=Genbank:WP_011192798.1;Name=WP_011192798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192798.1;transl_table=11 NC_010634.1 RefSeq gene 3267685 3268641 . - . ID=gene2956;Name=YPTS_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14825;old_locus_tag=YPTS_2945 NC_010634.1 Protein Homology CDS 3267685 3268641 . - 0 ID=cds2870;Parent=gene2956;Dbxref=Genbank:WP_011192799.1;Name=WP_011192799.1;gbkey=CDS;product=transporter;protein_id=WP_011192799.1;transl_table=11 NC_010634.1 RefSeq gene 3269010 3270497 . - . ID=gene2957;Name=YPTS_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14830;old_locus_tag=YPTS_2946 NC_010634.1 Protein Homology CDS 3269010 3270497 . - 0 ID=cds2871;Parent=gene2957;Dbxref=Genbank:WP_011192800.1;Name=WP_011192800.1;gbkey=CDS;product=GTPase Der;protein_id=WP_011192800.1;transl_table=11 NC_010634.1 RefSeq gene 3270645 3271826 . - . ID=gene2958;Name=YPTS_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14835;old_locus_tag=YPTS_2947 NC_010634.1 Protein Homology CDS 3270645 3271826 . - 0 ID=cds2872;Parent=gene2958;Dbxref=Genbank:WP_011192801.1;Name=WP_011192801.1;gbkey=CDS;product=outer membrane biogenesis protein BamB;protein_id=WP_011192801.1;transl_table=11 NC_010634.1 RefSeq gene 3271838 3272473 . - . ID=gene2959;Name=YPTS_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14840;old_locus_tag=YPTS_2948 NC_010634.1 Protein Homology CDS 3271838 3272473 . - 0 ID=cds2873;Parent=gene2959;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11 NC_010634.1 RefSeq gene 3272487 3273761 . - . ID=gene2960;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YPTS_RS14845;old_locus_tag=YPTS_2949 NC_010634.1 Protein Homology CDS 3272487 3273761 . - 0 ID=cds2874;Parent=gene2960;Dbxref=Genbank:WP_002209816.1;Name=WP_002209816.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_002209816.1;transl_table=11 NC_010634.1 RefSeq gene 3273970 3275097 . - . ID=gene2961;Name=YPTS_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14850;old_locus_tag=YPTS_2950 NC_010634.1 Protein Homology CDS 3273970 3275097 . - 0 ID=cds2875;Parent=gene2961;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11 NC_010634.1 RefSeq gene 3275201 3276289 . - . ID=gene2962;Name=YPTS_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14855;old_locus_tag=YPTS_2951 NC_010634.1 Protein Homology CDS 3275201 3276289 . - 0 ID=cds2876;Parent=gene2962;Dbxref=Genbank:WP_011192802.1;Name=WP_011192802.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_011192802.1;transl_table=11 NC_010634.1 RefSeq gene 3276279 3277028 . - . ID=gene2963;Name=YPTS_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14860;old_locus_tag=YPTS_2952 NC_010634.1 Protein Homology CDS 3276279 3277028 . - 0 ID=cds2877;Parent=gene2963;Dbxref=Genbank:WP_011192803.1;Name=WP_011192803.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_011192803.1;transl_table=11 NC_010634.1 RefSeq gene 3277182 3278378 . - . ID=gene2964;Name=YPTS_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14865;old_locus_tag=YPTS_2953 NC_010634.1 Protein Homology CDS 3277182 3278378 . - 0 ID=cds2878;Parent=gene2964;Dbxref=Genbank:WP_012413853.1;Name=WP_012413853.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_012413853.1;transl_table=11 NC_010634.1 RefSeq gene 3278640 3279068 . - . ID=gene2965;Name=YPTS_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14870;old_locus_tag=YPTS_2954 NC_010634.1 Protein Homology CDS 3278640 3279068 . - 0 ID=cds2879;Parent=gene2965;Dbxref=Genbank:WP_004875799.1;Name=WP_004875799.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_004875799.1;transl_table=11 NC_010634.1 RefSeq gene 3279395 3281815 . - . ID=gene2966;Name=YPTS_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14875;old_locus_tag=YPTS_2955 NC_010634.1 Protein Homology CDS 3279395 3281815 . - 0 ID=cds2880;Parent=gene2966;Dbxref=Genbank:WP_012413854.1;Name=WP_012413854.1;gbkey=CDS;product=beta and gamma crystallin;protein_id=WP_012413854.1;transl_table=11 NC_010634.1 RefSeq gene 3281990 3282246 . + . ID=gene2967;Name=YPTS_RS14880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS14880;pseudo=true NC_010634.1 Protein Homology CDS 3281990 3282246 . + 0 ID=cds2881;Parent=gene2967;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 3282531 3282851 . + . ID=gene2968;Name=YPTS_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14885;old_locus_tag=YPTS_2956 NC_010634.1 Protein Homology CDS 3282531 3282851 . + 0 ID=cds2882;Parent=gene2968;Dbxref=Genbank:WP_012413855.1;Name=WP_012413855.1;gbkey=CDS;product=autotransporter protein;protein_id=WP_012413855.1;transl_table=11 NC_010634.1 RefSeq gene 3282892 3287133 . + . ID=gene2969;Name=YPTS_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14890;old_locus_tag=YPTS_2957 NC_010634.1 Protein Homology CDS 3282892 3287133 . + 0 ID=cds2883;Parent=gene2969;Dbxref=Genbank:WP_012413856.1;Name=WP_012413856.1;gbkey=CDS;product=autotransporter;protein_id=WP_012413856.1;transl_table=11 NC_010634.1 RefSeq gene 3287690 3291055 . + . ID=gene2970;Name=YPTS_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14895;old_locus_tag=YPTS_2958 NC_010634.1 Protein Homology CDS 3287690 3291055 . + 0 ID=cds2884;Parent=gene2970;Dbxref=Genbank:WP_012413857.1;Name=WP_012413857.1;gbkey=CDS;product=pertactin;protein_id=WP_012413857.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3291119 3291289 . + . ID=id214;gbkey=repeat_region NC_010634.1 RefSeq gene 3291325 3292278 . - . ID=gene2971;Name=YPTS_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14900;old_locus_tag=YPTS_2959 NC_010634.1 Protein Homology CDS 3291325 3292278 . - 0 ID=cds2885;Parent=gene2971;Dbxref=Genbank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_002209828.1;transl_table=11 NC_010634.1 RefSeq gene 3292357 3293655 . - . ID=gene2972;Name=YPTS_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14905;old_locus_tag=YPTS_2960 NC_010634.1 Protein Homology CDS 3292357 3293655 . - 0 ID=cds2886;Parent=gene2972;Dbxref=Genbank:WP_011192810.1;Name=WP_011192810.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_011192810.1;transl_table=11 NC_010634.1 RefSeq gene 3293795 3293995 . - . ID=gene2973;Name=YPTS_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14910;old_locus_tag=YPTS_2961 NC_010634.1 Protein Homology CDS 3293795 3293995 . - 0 ID=cds2887;Parent=gene2973;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11 NC_010634.1 RefSeq gene 3294025 3294360 . - . ID=gene2974;Name=YPTS_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14915;old_locus_tag=YPTS_2962 NC_010634.1 Protein Homology CDS 3294025 3294360 . - 0 ID=cds2888;Parent=gene2974;Dbxref=Genbank:WP_002209831.1;Name=WP_002209831.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002209831.1;transl_table=11 NC_010634.1 RefSeq gene 3294363 3296297 . - . ID=gene2975;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YPTS_RS14920;old_locus_tag=YPTS_2963 NC_010634.1 Protein Homology CDS 3294363 3296297 . - 0 ID=cds2889;Parent=gene2975;Dbxref=Genbank:WP_012413858.1;Name=WP_012413858.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_012413858.1;transl_table=11 NC_010634.1 RefSeq gene 3296540 3297064 . - . ID=gene2976;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YPTS_RS14925;old_locus_tag=YPTS_2964 NC_010634.1 Protein Homology CDS 3296540 3297064 . - 0 ID=cds2890;Parent=gene2976;Dbxref=Genbank:WP_011192812.1;Name=WP_011192812.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_011192812.1;transl_table=11 NC_010634.1 RefSeq gene 3297175 3297498 . - . ID=gene2977;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YPTS_RS14930;old_locus_tag=YPTS_2965 NC_010634.1 Protein Homology CDS 3297175 3297498 . - 0 ID=cds2891;Parent=gene2977;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11 NC_010634.1 RefSeq gene 3297768 3298154 . - . ID=gene2978;Name=YPTS_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14935;old_locus_tag=YPTS_2966 NC_010634.1 Protein Homology CDS 3297768 3298154 . - 0 ID=cds2892;Parent=gene2978;Dbxref=Genbank:WP_011192813.1;Name=WP_011192813.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_011192813.1;transl_table=11 NC_010634.1 RefSeq gene 3298185 3299414 . - . ID=gene2979;Name=YPTS_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14940;old_locus_tag=YPTS_2967 NC_010634.1 Protein Homology CDS 3298185 3299414 . - 0 ID=cds2893;Parent=gene2979;Dbxref=Genbank:WP_011192814.1;Name=WP_011192814.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_011192814.1;transl_table=11 NC_010634.1 RefSeq gene 3299468 3299962 . - . ID=gene2980;Name=YPTS_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14945;old_locus_tag=YPTS_2968 NC_010634.1 Protein Homology CDS 3299468 3299962 . - 0 ID=cds2894;Parent=gene2980;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NC_010634.1 RefSeq gene 3300118 3300891 . - . ID=gene2981;Name=YPTS_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14950;old_locus_tag=YPTS_2969 NC_010634.1 Protein Homology CDS 3300118 3300891 . - 0 ID=cds2895;Parent=gene2981;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NC_010634.1 RefSeq gene 3301010 3301813 . + . ID=gene2982;Name=YPTS_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14955;old_locus_tag=YPTS_2970 NC_010634.1 Protein Homology CDS 3301010 3301813 . + 0 ID=cds2896;Parent=gene2982;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11 NC_010634.1 RefSeq gene 3301912 3302934 . - . ID=gene2983;Name=YPTS_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14960;old_locus_tag=YPTS_2971 NC_010634.1 Protein Homology CDS 3301912 3302934 . - 0 ID=cds2897;Parent=gene2983;Dbxref=Genbank:WP_012413859.1;Name=WP_012413859.1;gbkey=CDS;product=nickel transporter;protein_id=WP_012413859.1;transl_table=11 NC_010634.1 RefSeq gene 3302925 3303599 . - . ID=gene2984;Name=YPTS_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14965;old_locus_tag=YPTS_2972 NC_010634.1 Protein Homology CDS 3302925 3303599 . - 0 ID=cds2898;Parent=gene2984;Dbxref=Genbank:WP_012413860.1;Name=WP_012413860.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413860.1;transl_table=11 NC_010634.1 RefSeq gene 3303741 3305102 . + . ID=gene2985;Name=YPTS_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14970;old_locus_tag=YPTS_2973 NC_010634.1 Protein Homology CDS 3303741 3305102 . + 0 ID=cds2899;Parent=gene2985;Dbxref=Genbank:WP_012413861.1;Name=WP_012413861.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_012413861.1;transl_table=11 NC_010634.1 RefSeq gene 3305099 3306256 . - . ID=gene2986;Name=YPTS_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14975;old_locus_tag=YPTS_2974 NC_010634.1 Protein Homology CDS 3305099 3306256 . - 0 ID=cds2900;Parent=gene2986;Dbxref=Genbank:WP_002213316.1;Name=WP_002213316.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=WP_002213316.1;transl_table=11 NC_010634.1 RefSeq gene 3306608 3307147 . - . ID=gene2987;Name=YPTS_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14980;old_locus_tag=YPTS_2975 NC_010634.1 Protein Homology CDS 3306608 3307147 . - 0 ID=cds2901;Parent=gene2987;Dbxref=Genbank:WP_002222198.1;Name=WP_002222198.1;gbkey=CDS;product=attachment protein;protein_id=WP_002222198.1;transl_table=11 NC_010634.1 RefSeq gene 3307265 3307447 . - . ID=gene2988;Name=YPTS_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14985;old_locus_tag=YPTS_2977 NC_010634.1 Protein Homology CDS 3307265 3307447 . - 0 ID=cds2902;Parent=gene2988;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11 NC_010634.1 RefSeq gene 3307599 3308852 . - . ID=gene2989;Name=YPTS_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14990;old_locus_tag=YPTS_2978 NC_010634.1 Protein Homology CDS 3307599 3308852 . - 0 ID=cds2903;Parent=gene2989;Dbxref=Genbank:WP_002211552.1;Name=WP_002211552.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NC_010634.1 RefSeq gene 3309393 3310583 . + . ID=gene2990;Name=YPTS_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS14995;old_locus_tag=YPTS_2979 NC_010634.1 Protein Homology CDS 3309393 3310583 . + 0 ID=cds2904;Parent=gene2990;Dbxref=Genbank:WP_002211553.1;Name=WP_002211553.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=flavohemoprotein;protein_id=WP_002211553.1;transl_table=11 NC_010634.1 RefSeq gene 3311047 3311946 . + . ID=gene2991;Name=YPTS_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15000;old_locus_tag=YPTS_2980 NC_010634.1 Protein Homology CDS 3311047 3311946 . + 0 ID=cds2905;Parent=gene2991;Dbxref=Genbank:WP_011192818.1;Name=WP_011192818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192818.1;transl_table=11 NC_010634.1 RefSeq gene 3312128 3312466 . - . ID=gene2992;Name=YPTS_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15005;old_locus_tag=YPTS_2981 NC_010634.1 Protein Homology CDS 3312128 3312466 . - 0 ID=cds2906;Parent=gene2992;Dbxref=Genbank:WP_002231018.1;Name=WP_002231018.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002231018.1;transl_table=11 NC_010634.1 RefSeq gene 3312481 3314103 . - . ID=gene2993;Name=YPTS_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15010;old_locus_tag=YPTS_2982 NC_010634.1 Protein Homology CDS 3312481 3314103 . - 0 ID=cds2907;Parent=gene2993;Dbxref=Genbank:WP_002211555.1;Name=WP_002211555.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_002211555.1;transl_table=11 NC_010634.1 RefSeq gene 3314263 3315600 . - . ID=gene2994;Name=YPTS_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15015;old_locus_tag=YPTS_2984 NC_010634.1 Protein Homology CDS 3314263 3315600 . - 0 ID=cds2908;Parent=gene2994;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11 NC_010634.1 RefSeq gene 3315563 3316573 . - . ID=gene2995;Name=YPTS_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15020;old_locus_tag=YPTS_2985 NC_010634.1 Protein Homology CDS 3315563 3316573 . - 0 ID=cds2909;Parent=gene2995;Dbxref=Genbank:WP_038830211.1;Name=WP_038830211.1;gbkey=CDS;product=membrane protein;protein_id=WP_038830211.1;transl_table=11 NC_010634.1 RefSeq gene 3316649 3318085 . - . ID=gene2996;Name=YPTS_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15025;old_locus_tag=YPTS_2986 NC_010634.1 Protein Homology CDS 3316649 3318085 . - 0 ID=cds2910;Parent=gene2996;Dbxref=Genbank:WP_011192820.1;Name=WP_011192820.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_011192820.1;transl_table=11 NC_010634.1 RefSeq gene 3319280 3319840 . + . ID=gene2997;Name=YPTS_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15030;old_locus_tag=YPTS_2988 NC_010634.1 Protein Homology CDS 3319280 3319840 . + 0 ID=cds2911;Parent=gene2997;Dbxref=Genbank:WP_011192821.1;Name=WP_011192821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192821.1;transl_table=11 NC_010634.1 RefSeq gene 3320292 3320741 . + . ID=gene2998;Name=YPTS_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15035;old_locus_tag=YPTS_2989 NC_010634.1 Protein Homology CDS 3320292 3320741 . + 0 ID=cds2912;Parent=gene2998;Dbxref=Genbank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3320953 3321127 . + . ID=id215;gbkey=repeat_region NC_010634.1 RefSeq gene 3321158 3325048 . - . ID=gene2999;Name=YPTS_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15040;old_locus_tag=YPTS_2990 NC_010634.1 Protein Homology CDS 3321158 3325048 . - 0 ID=cds2913;Parent=gene2999;Dbxref=Genbank:WP_011192822.1;Name=WP_011192822.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_011192822.1;transl_table=11 NC_010634.1 RefSeq gene 3325364 3326824 . + . ID=gene3000;Name=YPTS_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15045;old_locus_tag=YPTS_2991 NC_010634.1 Protein Homology CDS 3325364 3326824 . + 0 ID=cds2914;Parent=gene3000;Dbxref=Genbank:WP_024062994.1;Name=WP_024062994.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_024062994.1;transl_table=11 NC_010634.1 RefSeq gene 3326951 3327553 . - . ID=gene3001;Name=YPTS_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15050;old_locus_tag=YPTS_2992 NC_010634.1 Protein Homology CDS 3326951 3327553 . - 0 ID=cds2915;Parent=gene3001;Dbxref=Genbank:WP_024062995.1;Name=WP_024062995.1;gbkey=CDS;product=tRNA-specific adenosine deaminase;protein_id=WP_024062995.1;transl_table=11 NC_010634.1 RefSeq gene 3327624 3328319 . - . ID=gene3002;Name=YPTS_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15055;old_locus_tag=YPTS_2993 NC_010634.1 Protein Homology CDS 3327624 3328319 . - 0 ID=cds2916;Parent=gene3002;Dbxref=Genbank:WP_002211564.1;Name=WP_002211564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211564.1;transl_table=11 NC_010634.1 RefSeq gene 3328546 3329433 . - . ID=gene3003;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=YPTS_RS15060;old_locus_tag=YPTS_2994 NC_010634.1 Protein Homology CDS 3328546 3329433 . - 0 ID=cds2917;Parent=gene3003;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NC_010634.1 RefSeq gene 3329641 3330480 . + . ID=gene3004;Name=YPTS_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15065;old_locus_tag=YPTS_2995 NC_010634.1 Protein Homology CDS 3329641 3330480 . + 0 ID=cds2918;Parent=gene3004;Dbxref=Genbank:WP_002211566.1;Name=WP_002211566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NC_010634.1 RefSeq gene 3330642 3330902 . + . ID=gene3005;Name=YPTS_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15070 NC_010634.1 Protein Homology CDS 3330642 3330902 . + 0 ID=cds2919;Parent=gene3005;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11 NC_010634.1 RefSeq gene 3331008 3331388 . - . ID=gene3006;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YPTS_RS15075;old_locus_tag=YPTS_2997 NC_010634.1 Protein Homology CDS 3331008 3331388 . - 0 ID=cds2920;Parent=gene3006;Dbxref=Genbank:WP_011192825.1;Name=WP_011192825.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_011192825.1;transl_table=11 NC_010634.1 RefSeq gene 3331388 3332119 . - . ID=gene3007;Name=YPTS_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15080;old_locus_tag=YPTS_2998 NC_010634.1 Protein Homology CDS 3331388 3332119 . - 0 ID=cds2921;Parent=gene3007;Dbxref=Genbank:WP_011192826.1;Name=WP_011192826.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_011192826.1;transl_table=11 NC_010634.1 RefSeq gene 3332278 3333003 . - . ID=gene3008;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YPTS_RS15085;old_locus_tag=YPTS_2999 NC_010634.1 Protein Homology CDS 3332278 3333003 . - 0 ID=cds2922;Parent=gene3008;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NC_010634.1 RefSeq gene 3333013 3333924 . - . ID=gene3009;Name=YPTS_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15090;old_locus_tag=YPTS_3000 NC_010634.1 Protein Homology CDS 3333013 3333924 . - 0 ID=cds2923;Parent=gene3009;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NC_010634.1 RefSeq gene 3333921 3334601 . - . ID=gene3010;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YPTS_RS15095;old_locus_tag=YPTS_3001 NC_010634.1 Protein Homology CDS 3333921 3334601 . - 0 ID=cds2924;Parent=gene3010;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11 NC_010634.1 RefSeq gene 3334953 3335951 . - . ID=gene3011;Name=YPTS_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15100;old_locus_tag=YPTS_3002 NC_010634.1 Protein Homology CDS 3334953 3335951 . - 0 ID=cds2925;Parent=gene3011;Dbxref=Genbank:WP_012104784.1;Name=WP_012104784.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase;protein_id=WP_012104784.1;transl_table=11 NC_010634.1 RefSeq gene 3335961 3337760 . - . ID=gene3012;Name=YPTS_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15105;old_locus_tag=YPTS_3003 NC_010634.1 Protein Homology CDS 3335961 3337760 . - 0 ID=cds2926;Parent=gene3012;Dbxref=Genbank:WP_002209677.1;Name=WP_002209677.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NC_010634.1 RefSeq gene 3338260 3339114 . + . ID=gene3013;Name=YPTS_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15110;old_locus_tag=YPTS_3004 NC_010634.1 Protein Homology CDS 3338260 3339114 . + 0 ID=cds2927;Parent=gene3013;Dbxref=Genbank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209676.1;transl_table=11 NC_010634.1 RefSeq gene 3339135 3339590 . - . ID=gene3014;Name=YPTS_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15115;old_locus_tag=YPTS_3005 NC_010634.1 Protein Homology CDS 3339135 3339590 . - 0 ID=cds2928;Parent=gene3014;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NC_010634.1 RefSeq gene 3339587 3340543 . - . ID=gene3015;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YPTS_RS15120;old_locus_tag=YPTS_3006 NC_010634.1 Protein Homology CDS 3339587 3340543 . - 0 ID=cds2929;Parent=gene3015;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11 NC_010634.1 RefSeq gene 3340543 3341199 . - . ID=gene3016;Name=YPTS_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15125;old_locus_tag=YPTS_3007 NC_010634.1 Protein Homology CDS 3340543 3341199 . - 0 ID=cds2930;Parent=gene3016;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11 NC_010634.1 RefSeq gene 3341225 3341800 . - . ID=gene3017;Name=YPTS_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15130;old_locus_tag=YPTS_3008 NC_010634.1 Protein Homology CDS 3341225 3341800 . - 0 ID=cds2931;Parent=gene3017;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11 NC_010634.1 RefSeq gene 3341988 3343625 . + . ID=gene3018;Name=YPTS_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15135;old_locus_tag=YPTS_3009 NC_010634.1 Protein Homology CDS 3341988 3343625 . + 0 ID=cds2932;Parent=gene3018;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3343664 3343840 . + . ID=id216;gbkey=repeat_region NC_010634.1 RefSeq gene 3343908 3344654 . - . ID=gene3019;Name=YPTS_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15140;old_locus_tag=YPTS_3010 NC_010634.1 Protein Homology CDS 3343908 3344654 . - 0 ID=cds2933;Parent=gene3019;Dbxref=Genbank:WP_002209670.1;Name=WP_002209670.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002209670.1;transl_table=11 NC_010634.1 RefSeq gene 3344921 3346246 . + . ID=gene3020;Name=YPTS_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15145;old_locus_tag=YPTS_3011 NC_010634.1 Protein Homology CDS 3344921 3346246 . + 0 ID=cds2934;Parent=gene3020;Dbxref=Genbank:WP_002209669.1;Name=WP_002209669.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002209669.1;transl_table=11 NC_010634.1 RefSeq gene 3346377 3347033 . - . ID=gene3021;Name=YPTS_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15150;old_locus_tag=YPTS_3013 NC_010634.1 Protein Homology CDS 3346377 3347033 . - 0 ID=cds2935;Parent=gene3021;Dbxref=Genbank:WP_002209667.1;Name=WP_002209667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209667.1;transl_table=11 NC_010634.1 RefSeq gene 3347020 3347118 . - . ID=gene3022;Name=YPTS_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15155;old_locus_tag=YPTS_3014 NC_010634.1 Protein Homology CDS 3347020 3347118 . - 0 ID=cds2936;Parent=gene3022;Dbxref=Genbank:WP_002228379.1;Name=WP_002228379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228379.1;transl_table=11 NC_010634.1 RefSeq gene 3347111 3348073 . - . ID=gene3023;Name=YPTS_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15160;old_locus_tag=YPTS_3015 NC_010634.1 Protein Homology CDS 3347111 3348073 . - 0 ID=cds2937;Parent=gene3023;Dbxref=Genbank:WP_002209665.1;Name=WP_002209665.1;gbkey=CDS;product=phospholipase A;protein_id=WP_002209665.1;transl_table=11 NC_010634.1 RefSeq gene 3348252 3348635 . - . ID=gene3024;Name=YPTS_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15165;old_locus_tag=YPTS_3016 NC_010634.1 Protein Homology CDS 3348252 3348635 . - 0 ID=cds2938;Parent=gene3024;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NC_010634.1 RefSeq gene 3348988 3349674 . + . ID=gene3025;Name=YPTS_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15170;old_locus_tag=YPTS_3017 NC_010634.1 Protein Homology CDS 3348988 3349674 . + 0 ID=cds2939;Parent=gene3025;Dbxref=Genbank:WP_012303780.1;Name=WP_012303780.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_012303780.1;transl_table=11 NC_010634.1 RefSeq gene 3349765 3350412 . - . ID=gene3026;Name=YPTS_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15175;old_locus_tag=YPTS_3018 NC_010634.1 Protein Homology CDS 3349765 3350412 . - 0 ID=cds2940;Parent=gene3026;Dbxref=Genbank:WP_002209662.1;Name=WP_002209662.1;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=WP_002209662.1;transl_table=11 NC_010634.1 RefSeq gene 3350422 3351441 . - . ID=gene3027;Name=YPTS_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15180;old_locus_tag=YPTS_3019 NC_010634.1 Protein Homology CDS 3350422 3351441 . - 0 ID=cds2941;Parent=gene3027;Dbxref=Genbank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209661.1;transl_table=11 NC_010634.1 RefSeq gene 3351438 3352169 . - . ID=gene3028;Name=YPTS_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15185;old_locus_tag=YPTS_3020 NC_010634.1 Protein Homology CDS 3351438 3352169 . - 0 ID=cds2942;Parent=gene3028;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11 NC_010634.1 RefSeq gene 3352254 3352991 . - . ID=gene3029;Name=YPTS_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15190;old_locus_tag=YPTS_3021 NC_010634.1 Protein Homology CDS 3352254 3352991 . - 0 ID=cds2943;Parent=gene3029;Dbxref=Genbank:WP_002209659.1;Name=WP_002209659.1;gbkey=CDS;product=LamB/YcsF family protein;protein_id=WP_002209659.1;transl_table=11 NC_010634.1 RefSeq gene 3352988 3353938 . - . ID=gene3030;Name=YPTS_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15195;old_locus_tag=YPTS_3022 NC_010634.1 Protein Homology CDS 3352988 3353938 . - 0 ID=cds2944;Parent=gene3030;Dbxref=Genbank:WP_002209658.1;Name=WP_002209658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209658.1;transl_table=11 NC_010634.1 RefSeq gene 3353932 3354588 . - . ID=gene3031;Name=YPTS_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15200;old_locus_tag=YPTS_3023 NC_010634.1 Protein Homology CDS 3353932 3354588 . - 0 ID=cds2945;Parent=gene3031;Dbxref=Genbank:WP_011192830.1;Name=WP_011192830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192830.1;transl_table=11 NC_010634.1 RefSeq gene 3355207 3355950 . - . ID=gene3032;Name=YPTS_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15205;old_locus_tag=YPTS_3025 NC_010634.1 Protein Homology CDS 3355207 3355950 . - 0 ID=cds2946;Parent=gene3032;Dbxref=Genbank:WP_025471060.1;Name=WP_025471060.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_025471060.1;transl_table=11 NC_010634.1 RefSeq gene 3356093 3357130 . - . ID=gene3033;Name=YPTS_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15210;old_locus_tag=YPTS_3026 NC_010634.1 Protein Homology CDS 3356093 3357130 . - 0 ID=cds2947;Parent=gene3033;Dbxref=Genbank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002209656.1;transl_table=11 NC_010634.1 RefSeq gene 3357121 3358584 . - . ID=gene3034;Name=YPTS_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15215;old_locus_tag=YPTS_3027 NC_010634.1 Protein Homology CDS 3357121 3358584 . - 0 ID=cds2948;Parent=gene3034;Dbxref=Genbank:WP_012413864.1;Name=WP_012413864.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_012413864.1;transl_table=11 NC_010634.1 RefSeq gene 3358714 3359196 . - . ID=gene3035;Name=YPTS_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15220;old_locus_tag=YPTS_3028 NC_010634.1 Protein Homology CDS 3358714 3359196 . - 0 ID=cds2949;Parent=gene3035;Dbxref=Genbank:WP_002209654.1;Name=WP_002209654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209654.1;transl_table=11 NC_010634.1 RefSeq gene 3359574 3359780 . - . ID=gene3036;Name=YPTS_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15225;old_locus_tag=YPTS_3030 NC_010634.1 Protein Homology CDS 3359574 3359780 . - 0 ID=cds2950;Parent=gene3036;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11 NC_010634.1 RefSeq gene 3360185 3360274 . + . ID=gene3037;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=YPTS_RS15230 NC_010634.1 Protein Homology CDS 3360185 3360274 . + 0 ID=cds2951;Parent=gene3037;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11 NC_010634.1 RefSeq gene 3360275 3361963 . + . ID=gene3038;Name=YPTS_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15235;old_locus_tag=YPTS_3031 NC_010634.1 Protein Homology CDS 3360275 3361963 . + 0 ID=cds2952;Parent=gene3038;Dbxref=Genbank:WP_012413865.1;Name=WP_012413865.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_012413865.1;transl_table=11 NC_010634.1 RefSeq gene 3362057 3364123 . + . ID=gene3039;Name=YPTS_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15240;old_locus_tag=YPTS_3032 NC_010634.1 Protein Homology CDS 3362057 3364123 . + 0 ID=cds2953;Parent=gene3039;Dbxref=Genbank:WP_002209651.1;Name=WP_002209651.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_002209651.1;transl_table=11 NC_010634.1 RefSeq gene 3364287 3364937 . + . ID=gene3040;Name=YPTS_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15245;old_locus_tag=YPTS_3033 NC_010634.1 Protein Homology CDS 3364287 3364937 . + 0 ID=cds2954;Parent=gene3040;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11 NC_010634.1 RefSeq gene 3364947 3367673 . + . ID=gene3041;Name=YPTS_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15250;old_locus_tag=YPTS_3034 NC_010634.1 Protein Homology CDS 3364947 3367673 . + 0 ID=cds2955;Parent=gene3041;Dbxref=Genbank:WP_012413866.1;Name=WP_012413866.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_012413866.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3367710 3368001 . + . ID=id217;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3368016 3368134 . + . ID=id218;gbkey=repeat_region NC_010634.1 RefSeq gene 3368193 3368879 . + . ID=gene3042;Name=YPTS_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15255;old_locus_tag=YPTS_3035 NC_010634.1 Protein Homology CDS 3368193 3368879 . + 0 ID=cds2956;Parent=gene3042;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11 NC_010634.1 RefSeq gene 3368974 3369402 . + . ID=gene3043;Name=YPTS_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15260;old_locus_tag=YPTS_3036 NC_010634.1 Protein Homology CDS 3368974 3369402 . + 0 ID=cds2957;Parent=gene3043;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11 NC_010634.1 RefSeq gene 3369530 3369772 . - . ID=gene3044;Name=YPTS_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15265;old_locus_tag=YPTS_3037 NC_010634.1 Protein Homology CDS 3369530 3369772 . - 0 ID=cds2958;Parent=gene3044;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NC_010634.1 RefSeq gene 3369815 3369928 . - . ID=gene3045;Name=YPTS_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15270;old_locus_tag=YPTS_3038 NC_010634.1 Protein Homology CDS 3369815 3369928 . - 0 ID=cds2959;Parent=gene3045;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11 NC_010634.1 RefSeq gene 3370146 3371789 . - . ID=gene3046;Name=YPTS_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15275;old_locus_tag=YPTS_3039 NC_010634.1 Protein Homology CDS 3370146 3371789 . - 0 ID=cds2960;Parent=gene3046;Dbxref=Genbank:WP_012104769.1;Name=WP_012104769.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_012104769.1;transl_table=11 NC_010634.1 RefSeq gene 3371862 3372389 . - . ID=gene3047;Name=YPTS_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15280;old_locus_tag=YPTS_3040 NC_010634.1 Protein Homology CDS 3371862 3372389 . - 0 ID=cds2961;Parent=gene3047;Dbxref=Genbank:WP_002212248.1;Name=WP_002212248.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_002212248.1;transl_table=11 NC_010634.1 RefSeq gene 3372884 3373252 . + . ID=gene3048;Name=YPTS_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15285;old_locus_tag=YPTS_3041 NC_010634.1 Protein Homology CDS 3372884 3373252 . + 0 ID=cds2962;Parent=gene3048;Dbxref=Genbank:WP_002212246.1;Name=WP_002212246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212246.1;transl_table=11 NC_010634.1 RefSeq gene 3373364 3373540 . + . ID=gene3049;Name=YPTS_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15290;old_locus_tag=YPTS_3042 NC_010634.1 Protein Homology CDS 3373364 3373540 . + 0 ID=cds2963;Parent=gene3049;Dbxref=Genbank:WP_002212245.1;Name=WP_002212245.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212245.1;transl_table=11 NC_010634.1 RefSeq gene 3373547 3374308 . - . ID=gene3050;Name=YPTS_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15295;old_locus_tag=YPTS_3043 NC_010634.1 Protein Homology CDS 3373547 3374308 . - 0 ID=cds2964;Parent=gene3050;Dbxref=Genbank:WP_002212244.1;Name=WP_002212244.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11 NC_010634.1 RefSeq gene 3374360 3375190 . - . ID=gene3051;Name=YPTS_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15300;old_locus_tag=YPTS_3044 NC_010634.1 Protein Homology CDS 3374360 3375190 . - 0 ID=cds2965;Parent=gene3051;Dbxref=Genbank:WP_002212243.1;Name=WP_002212243.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212243.1;transl_table=11 NC_010634.1 RefSeq gene 3375239 3375586 . - . ID=gene3052;Name=YPTS_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15305;old_locus_tag=YPTS_3045 NC_010634.1 Protein Homology CDS 3375239 3375586 . - 0 ID=cds2966;Parent=gene3052;Dbxref=Genbank:WP_002212242.1;Name=WP_002212242.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIA;protein_id=WP_002212242.1;transl_table=11 NC_010634.1 RefSeq gene 3375753 3377114 . - . ID=gene3053;Name=YPTS_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15310;old_locus_tag=YPTS_3046 NC_010634.1 Protein Homology CDS 3375753 3377114 . - 0 ID=cds2967;Parent=gene3053;Dbxref=Genbank:WP_012413868.1;Name=WP_012413868.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_012413868.1;transl_table=11 NC_010634.1 RefSeq gene 3377125 3377442 . - . ID=gene3054;Name=YPTS_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15315;old_locus_tag=YPTS_3047 NC_010634.1 Protein Homology CDS 3377125 3377442 . - 0 ID=cds2968;Parent=gene3054;Dbxref=Genbank:WP_011192837.1;Name=WP_011192837.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_011192837.1;transl_table=11 NC_010634.1 RefSeq gene 3378214 3378393 . + . ID=gene3055;Name=YPTS_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15320 NC_010634.1 Protein Homology CDS 3378214 3378393 . + 0 ID=cds2969;Parent=gene3055;Dbxref=Genbank:WP_012104765.1;Name=WP_012104765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104765.1;transl_table=11 NC_010634.1 RefSeq gene 3378482 3378862 . + . ID=gene3056;Name=YPTS_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15325;old_locus_tag=YPTS_3048 NC_010634.1 Protein Homology CDS 3378482 3378862 . + 0 ID=cds2970;Parent=gene3056;Dbxref=Genbank:WP_011192838.1;Name=WP_011192838.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_011192838.1;transl_table=11 NC_010634.1 RefSeq gene 3378878 3379282 . + . ID=gene3057;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=YPTS_RS15330;old_locus_tag=YPTS_3049 NC_010634.1 Protein Homology CDS 3378878 3379282 . + 0 ID=cds2971;Parent=gene3057;Dbxref=Genbank:WP_002212237.1;Name=WP_002212237.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_002212237.1;transl_table=11 NC_010634.1 RefSeq gene 3379380 3380555 . - . ID=gene3058;Name=YPTS_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15335;old_locus_tag=YPTS_3050 NC_010634.1 Protein Homology CDS 3379380 3380555 . - 0 ID=cds2972;Parent=gene3058;Dbxref=Genbank:WP_011192839.1;Name=WP_011192839.1;gbkey=CDS;product=voltage-gated potassium channel TrkA;protein_id=WP_011192839.1;transl_table=11 NC_010634.1 RefSeq gene 3380945 3381175 . - . ID=gene3059;Name=YPTS_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15340 NC_010634.1 Protein Homology CDS 3380945 3381175 . - 0 ID=cds2973;Parent=gene3059;Dbxref=Genbank:WP_032466576.1;Name=WP_032466576.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466576.1;transl_table=11 NC_010634.1 RefSeq gene 3381174 3381503 . + . ID=gene3060;Name=YPTS_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15345;old_locus_tag=YPTS_3051 NC_010634.1 Protein Homology CDS 3381174 3381503 . + 0 ID=cds2974;Parent=gene3060;Dbxref=Genbank:WP_012413869.1;Name=WP_012413869.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_012413869.1;transl_table=11 NC_010634.1 RefSeq gene 3381668 3382726 . - . ID=gene3061;Name=YPTS_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15350;old_locus_tag=YPTS_3052 NC_010634.1 Protein Homology CDS 3381668 3382726 . - 0 ID=cds2975;Parent=gene3061;Dbxref=Genbank:WP_011192840.1;Name=WP_011192840.1;gbkey=CDS;product=nickel transporter;protein_id=WP_011192840.1;transl_table=11 NC_010634.1 RefSeq gene 3382875 3383867 . - . ID=gene3062;Name=YPTS_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15355;old_locus_tag=YPTS_3053 NC_010634.1 Protein Homology CDS 3382875 3383867 . - 0 ID=cds2976;Parent=gene3062;Dbxref=Genbank:WP_011192841.1;Name=WP_011192841.1;gbkey=CDS;product=urea transporter;protein_id=WP_011192841.1;transl_table=11 NC_010634.1 RefSeq gene 3384246 3385211 . - . ID=gene3063;Name=YPTS_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15360;old_locus_tag=YPTS_3054 NC_010634.1 Protein Homology CDS 3384246 3385211 . - 0 ID=cds2977;Parent=gene3063;Dbxref=Genbank:WP_011192842.1;Name=WP_011192842.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_011192842.1;transl_table=11 NC_010634.1 RefSeq gene 3385208 3385870 . - . ID=gene3064;Name=YPTS_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15365;old_locus_tag=YPTS_3055 NC_010634.1 Protein Homology CDS 3385208 3385870 . - 0 ID=cds2978;Parent=gene3064;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NC_010634.1 RefSeq gene 3385997 3386683 . - . ID=gene3065;Name=YPTS_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15370;old_locus_tag=YPTS_3056 NC_010634.1 Protein Homology CDS 3385997 3386683 . - 0 ID=cds2979;Parent=gene3065;Dbxref=Genbank:WP_011192843.1;Name=WP_011192843.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_011192843.1;transl_table=11 NC_010634.1 RefSeq gene 3386705 3387400 . - . ID=gene3066;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YPTS_RS15375;old_locus_tag=YPTS_3057 NC_010634.1 Protein Homology CDS 3386705 3387400 . - 0 ID=cds2980;Parent=gene3066;Dbxref=Genbank:WP_011192844.1;Name=WP_011192844.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_011192844.1;transl_table=11 NC_010634.1 RefSeq gene 3387696 3389414 . - . ID=gene3067;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=YPTS_RS15380;old_locus_tag=YPTS_3058 NC_010634.1 Protein Homology CDS 3387696 3389414 . - 0 ID=cds2981;Parent=gene3067;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NC_010634.1 RefSeq gene 3389504 3389938 . - . ID=gene3068;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YPTS_RS15385;old_locus_tag=YPTS_3059 NC_010634.1 Protein Homology CDS 3389504 3389938 . - 0 ID=cds2982;Parent=gene3068;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NC_010634.1 RefSeq gene 3389991 3390293 . - . ID=gene3069;Name=YPTS_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15390;old_locus_tag=YPTS_3060 NC_010634.1 Protein Homology CDS 3389991 3390293 . - 0 ID=cds2983;Parent=gene3069;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NC_010634.1 RefSeq gene 3391492 3392157 . - . ID=gene3070;Name=YPTS_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15395;old_locus_tag=YPTS_3062 NC_010634.1 Protein Homology CDS 3391492 3392157 . - 0 ID=cds2984;Parent=gene3070;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11 NC_010634.1 RefSeq gene 3392150 3392956 . - . ID=gene3071;Name=YPTS_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15400;old_locus_tag=YPTS_3063 NC_010634.1 Protein Homology CDS 3392150 3392956 . - 0 ID=cds2985;Parent=gene3071;Dbxref=Genbank:WP_011192845.1;Name=WP_011192845.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_011192845.1;transl_table=11 NC_010634.1 RefSeq gene 3392956 3393762 . - . ID=gene3072;Name=YPTS_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15405;old_locus_tag=YPTS_3064 NC_010634.1 Protein Homology CDS 3392956 3393762 . - 0 ID=cds2986;Parent=gene3072;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NC_010634.1 RefSeq gene 3393759 3394742 . - . ID=gene3073;Name=YPTS_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15410;old_locus_tag=YPTS_3065 NC_010634.1 Protein Homology CDS 3393759 3394742 . - 0 ID=cds2987;Parent=gene3073;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11 NC_010634.1 RefSeq gene 3394727 3396304 . - . ID=gene3074;Name=YPTS_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15415;old_locus_tag=YPTS_3066 NC_010634.1 Protein Homology CDS 3394727 3396304 . - 0 ID=cds2988;Parent=gene3074;Dbxref=Genbank:WP_011192846.1;Name=WP_011192846.1;gbkey=CDS;product=nickel ABC transporter substrate-binding protein;protein_id=WP_011192846.1;transl_table=11 NC_010634.1 cmsearch region 3397099 3397560 . - . ID=id219;Note=cspA;gbkey=misc_feature NC_010634.1 RefSeq gene 3397170 3397382 . - . ID=gene3075;Name=YPTS_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15420;old_locus_tag=YPTS_3067 NC_010634.1 Protein Homology CDS 3397170 3397382 . - 0 ID=cds2989;Parent=gene3075;Dbxref=Genbank:WP_002212220.1;Name=WP_002212220.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_002212220.1;transl_table=11 NC_010634.1 RefSeq gene 3397910 3398248 . + . ID=gene3076;Name=YPTS_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15425;old_locus_tag=YPTS_3068 NC_010634.1 Protein Homology CDS 3397910 3398248 . + 0 ID=cds2990;Parent=gene3076;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11 NC_010634.1 RefSeq gene 3398413 3398862 . + . ID=gene3077;Name=YPTS_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15430;old_locus_tag=YPTS_3069 NC_010634.1 Protein Homology CDS 3398413 3398862 . + 0 ID=cds2991;Parent=gene3077;Dbxref=Genbank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212217.1;transl_table=11 NC_010634.1 RefSeq gene 3398960 3399295 . - . ID=gene3078;Name=YPTS_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15435;old_locus_tag=YPTS_3070 NC_010634.1 Protein Homology CDS 3398960 3399295 . - 0 ID=cds2992;Parent=gene3078;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11 NC_010634.1 RefSeq gene 3399774 3400139 . - . ID=gene3079;Name=YPTS_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15440;old_locus_tag=YPTS_3071 NC_010634.1 Protein Homology CDS 3399774 3400139 . - 0 ID=cds2993;Parent=gene3079;Dbxref=Genbank:WP_011192847.1;Name=WP_011192847.1;gbkey=CDS;product=acid shock protein;protein_id=WP_011192847.1;transl_table=11 NC_010634.1 RefSeq gene 3400661 3400897 . + . ID=gene3080;Name=YPTS_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15445;old_locus_tag=YPTS_3072 NC_010634.1 Protein Homology CDS 3400661 3400897 . + 0 ID=cds2994;Parent=gene3080;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11 NC_010634.1 RefSeq gene 3400911 3401315 . + . ID=gene3081;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YPTS_RS15450;old_locus_tag=YPTS_3073 NC_010634.1 Protein Homology CDS 3400911 3401315 . + 0 ID=cds2995;Parent=gene3081;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11 NC_010634.1 RefSeq gene 3401297 3403447 . + . ID=gene3082;Name=YPTS_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15455;old_locus_tag=YPTS_3074 NC_010634.1 Protein Homology CDS 3401297 3403447 . + 0 ID=cds2996;Parent=gene3082;Dbxref=Genbank:WP_011192848.1;Name=WP_011192848.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_011192848.1;transl_table=11 NC_010634.1 RefSeq gene 3403554 3404525 . + . ID=gene3083;Name=YPTS_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15460;old_locus_tag=YPTS_3075 NC_010634.1 Protein Homology CDS 3403554 3404525 . + 0 ID=cds2997;Parent=gene3083;Dbxref=Genbank:WP_002212211.1;Name=WP_002212211.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NC_010634.1 RefSeq gene 3405201 3406400 . + . ID=gene3084;Name=YPTS_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15465;old_locus_tag=YPTS_3076 NC_010634.1 Protein Homology CDS 3405201 3406400 . + 0 ID=cds2998;Parent=gene3084;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11 NC_010634.1 RefSeq gene 3406393 3407559 . + . ID=gene3085;Name=YPTS_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15470;old_locus_tag=YPTS_3077 NC_010634.1 Protein Homology CDS 3406393 3407559 . + 0 ID=cds2999;Parent=gene3085;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11 NC_010634.1 RefSeq gene 3407607 3408611 . + . ID=gene3086;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YPTS_RS15475;old_locus_tag=YPTS_3078 NC_010634.1 Protein Homology CDS 3407607 3408611 . + 0 ID=cds3000;Parent=gene3086;Dbxref=Genbank:WP_011192849.1;Name=WP_011192849.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_011192849.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3408642 3408812 . + . ID=id220;gbkey=repeat_region NC_010634.1 RefSeq gene 3408841 3409791 . - . ID=gene3087;Name=YPTS_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15480;old_locus_tag=YPTS_3080 NC_010634.1 Protein Homology CDS 3408841 3409791 . - 0 ID=cds3001;Parent=gene3087;Dbxref=Genbank:WP_011192850.1;Name=WP_011192850.1;gbkey=CDS;product=allantoinase;protein_id=WP_011192850.1;transl_table=11 NC_010634.1 RefSeq gene 3410112 3411596 . + . ID=gene3088;Name=YPTS_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15485;old_locus_tag=YPTS_3081 NC_010634.1 Protein Homology CDS 3410112 3411596 . + 0 ID=cds3002;Parent=gene3088;Dbxref=Genbank:WP_012303765.1;Name=WP_012303765.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_012303765.1;transl_table=11 NC_010634.1 RefSeq gene 3411653 3411729 . - . ID=gene3089;Name=YPTS_RS15490;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS15490;old_locus_tag=YPTS_R0060 NC_010634.1 tRNAscan-SE tRNA 3411653 3411729 . - . ID=rna79;Parent=gene3089;anticodon=(pos:complement(3411693..3411695));gbkey=tRNA;product=tRNA-Asp NC_010634.1 tRNAscan-SE exon 3411653 3411729 . - . ID=id221;Parent=rna79;anticodon=(pos:complement(3411693..3411695));gbkey=tRNA;product=tRNA-Asp NC_010634.1 RefSeq gene 3411842 3412606 . - . ID=gene3090;Name=YPTS_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15495;old_locus_tag=YPTS_3082 NC_010634.1 Protein Homology CDS 3411842 3412606 . - 0 ID=cds3003;Parent=gene3090;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NC_010634.1 RefSeq gene 3412676 3413140 . + . ID=gene3091;Name=YPTS_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15500;old_locus_tag=YPTS_3083 NC_010634.1 Protein Homology CDS 3412676 3413140 . + 0 ID=cds3004;Parent=gene3091;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NC_010634.1 RefSeq gene 3413195 3413914 . - . ID=gene3092;Name=YPTS_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15505;old_locus_tag=YPTS_3084 NC_010634.1 Protein Homology CDS 3413195 3413914 . - 0 ID=cds3005;Parent=gene3092;Dbxref=Genbank:WP_002210698.1;Name=WP_002210698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210698.1;transl_table=11 NC_010634.1 RefSeq gene 3413959 3414714 . + . ID=gene3093;Name=YPTS_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15510;old_locus_tag=YPTS_3085 NC_010634.1 Protein Homology CDS 3413959 3414714 . + 0 ID=cds3006;Parent=gene3093;Dbxref=Genbank:WP_011192852.1;Name=WP_011192852.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_011192852.1;transl_table=11 NC_010634.1 RefSeq gene 3414786 3416174 . + . ID=gene3094;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=YPTS_RS15515;old_locus_tag=YPTS_3086 NC_010634.1 Protein Homology CDS 3414786 3416174 . + 0 ID=cds3007;Parent=gene3094;Dbxref=Genbank:WP_002228041.1;Name=WP_002228041.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_002228041.1;transl_table=11 NC_010634.1 RefSeq gene 3416217 3416978 . - . ID=gene3095;Name=YPTS_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15520;old_locus_tag=YPTS_3087 NC_010634.1 Protein Homology CDS 3416217 3416978 . - 0 ID=cds3008;Parent=gene3095;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11 NC_010634.1 RefSeq gene 3417360 3417806 . - . ID=gene3096;Name=YPTS_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15525;old_locus_tag=YPTS_3088 NC_010634.1 Protein Homology CDS 3417360 3417806 . - 0 ID=cds3009;Parent=gene3096;Dbxref=Genbank:WP_002210694.1;Name=WP_002210694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210694.1;transl_table=11 NC_010634.1 RefSeq gene 3417859 3418662 . - . ID=gene3097;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YPTS_RS15530;old_locus_tag=YPTS_3089 NC_010634.1 Protein Homology CDS 3417859 3418662 . - 0 ID=cds3010;Parent=gene3097;Dbxref=Genbank:WP_011192853.1;Name=WP_011192853.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_011192853.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3419027 3424644 . + . ID=id222;gbkey=repeat_region NC_010634.1 RefSeq gene 3419028 3419104 . - . ID=gene3098;Name=YPTS_RS15535;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS15535;old_locus_tag=YPTS_R0059 NC_010634.1 tRNAscan-SE tRNA 3419028 3419104 . - . ID=rna80;Parent=gene3098;anticodon=(pos:complement(3419068..3419070));gbkey=tRNA;product=tRNA-Asp NC_010634.1 tRNAscan-SE exon 3419028 3419104 . - . ID=id223;Parent=rna80;anticodon=(pos:complement(3419068..3419070));gbkey=tRNA;product=tRNA-Asp NC_010634.1 RefSeq gene 3419230 3419345 . - . ID=gene3099;Name=YPTS_RS15540;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS15540;old_locus_tag=YPTS_R0102 NC_010634.1 cmsearch rRNA 3419230 3419345 . - . ID=rna81;Parent=gene3099;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 3419230 3419345 . - . ID=id224;Parent=rna81;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 3419437 3422370 . - . ID=gene3100;Name=YPTS_RS15545;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS15545;old_locus_tag=YPTS_R0097 NC_010634.1 RefSeq rRNA 3419437 3422370 . - . ID=rna82;Parent=gene3100;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq exon 3419437 3422370 . - . ID=id225;Parent=rna82;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq gene 3422614 3422689 . - . ID=gene3101;Name=YPTS_RS15550;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS15550;old_locus_tag=YPTS_R0058 NC_010634.1 tRNAscan-SE tRNA 3422614 3422689 . - . ID=rna83;Parent=gene3101;anticodon=(pos:complement(3422653..3422655));gbkey=tRNA;product=tRNA-Glu NC_010634.1 tRNAscan-SE exon 3422614 3422689 . - . ID=id226;Parent=rna83;anticodon=(pos:complement(3422653..3422655));gbkey=tRNA;product=tRNA-Glu NC_010634.1 RefSeq gene 3422823 3424371 . - . ID=gene3102;Name=YPTS_RS15555;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS15555;old_locus_tag=YPTS_R0089 NC_010634.1 RefSeq rRNA 3422823 3424371 . - . ID=rna84;Parent=gene3102;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq exon 3422823 3424371 . - . ID=id227;Parent=rna84;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq gene 3424810 3425376 . - . ID=gene3103;Name=YPTS_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15565;old_locus_tag=YPTS_3092 NC_010634.1 Protein Homology CDS 3424810 3425376 . - 0 ID=cds3011;Parent=gene3103;Dbxref=Genbank:WP_002220062.1;Name=WP_002220062.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 NC_010634.1 RefSeq gene 3425563 3426594 . + . ID=gene3104;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=YPTS_RS15570;old_locus_tag=YPTS_3093 NC_010634.1 Protein Homology CDS 3425563 3426594 . + 0 ID=cds3012;Parent=gene3104;Dbxref=Genbank:WP_011192854.1;Name=WP_011192854.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine import ATP-binding protein MetN 2;protein_id=WP_011192854.1;transl_table=11 NC_010634.1 RefSeq gene 3426587 3427240 . + . ID=gene3105;Name=YPTS_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15575;old_locus_tag=YPTS_3094 NC_010634.1 Protein Homology CDS 3426587 3427240 . + 0 ID=cds3013;Parent=gene3105;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11 NC_010634.1 RefSeq gene 3427304 3428119 . + . ID=gene3106;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=YPTS_RS15580;old_locus_tag=YPTS_3095 NC_010634.1 Protein Homology CDS 3427304 3428119 . + 0 ID=cds3014;Parent=gene3106;Dbxref=Genbank:WP_011192855.1;Name=WP_011192855.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_011192855.1;transl_table=11 NC_010634.1 RefSeq gene 3428237 3428644 . + . ID=gene3107;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YPTS_RS15585;old_locus_tag=YPTS_3096 NC_010634.1 Protein Homology CDS 3428237 3428644 . + 0 ID=cds3015;Parent=gene3107;Dbxref=Genbank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_002212158.1;transl_table=11 NC_010634.1 RefSeq gene 3428641 3429348 . + . ID=gene3108;Name=YPTS_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15590;old_locus_tag=YPTS_3097 NC_010634.1 Protein Homology CDS 3428641 3429348 . + 0 ID=cds3016;Parent=gene3108;Dbxref=Genbank:WP_002212157.1;Name=WP_002212157.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_002212157.1;transl_table=11 NC_010634.1 RefSeq gene 3429452 3431170 . + . ID=gene3109;Name=YPTS_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15595;old_locus_tag=YPTS_3098 NC_010634.1 Protein Homology CDS 3429452 3431170 . + 0 ID=cds3017;Parent=gene3109;Dbxref=Genbank:WP_011192856.1;Name=WP_011192856.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_011192856.1;transl_table=11 NC_010634.1 RefSeq gene 3431304 3431987 . - . ID=gene3110;Name=YPTS_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15600;old_locus_tag=YPTS_3099 NC_010634.1 Protein Homology CDS 3431304 3431987 . - 0 ID=cds3018;Parent=gene3110;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11 NC_010634.1 RefSeq gene 3432072 3432488 . - . ID=gene3111;Name=YPTS_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15605;old_locus_tag=YPTS_3100 NC_010634.1 Protein Homology CDS 3432072 3432488 . - 0 ID=cds3019;Parent=gene3111;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11 NC_010634.1 RefSeq gene 3432491 3433039 . - . ID=gene3112;Name=YPTS_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15610;old_locus_tag=YPTS_3101 NC_010634.1 Protein Homology CDS 3432491 3433039 . - 0 ID=cds3020;Parent=gene3112;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11 NC_010634.1 RefSeq gene 3433281 3433481 . + . ID=gene3113;Name=YPTS_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15615;old_locus_tag=YPTS_3102 NC_010634.1 Protein Homology CDS 3433281 3433481 . + 0 ID=cds3021;Parent=gene3113;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11 NC_010634.1 RefSeq gene 3433468 3433728 . + . ID=gene3114;Name=YPTS_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15620;old_locus_tag=YPTS_3103 NC_010634.1 Protein Homology CDS 3433468 3433728 . + 0 ID=cds3022;Parent=gene3114;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NC_010634.1 RefSeq gene 3433982 3434299 . - . ID=gene3115;Name=YPTS_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15625;old_locus_tag=YPTS_3104 NC_010634.1 Protein Homology CDS 3433982 3434299 . - 0 ID=cds3023;Parent=gene3115;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11 NC_010634.1 RefSeq gene 3434536 3435918 . - . ID=gene3116;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YPTS_RS15630;old_locus_tag=YPTS_3105 NC_010634.1 Protein Homology CDS 3434536 3435918 . - 0 ID=cds3024;Parent=gene3116;Dbxref=Genbank:WP_011192857.1;Name=WP_011192857.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_011192857.1;transl_table=11 NC_010634.1 RefSeq gene 3435920 3436318 . - . ID=gene3117;Name=YPTS_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15635;old_locus_tag=YPTS_3106 NC_010634.1 Protein Homology CDS 3435920 3436318 . - 0 ID=cds3025;Parent=gene3117;Dbxref=Genbank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;product=lyase;protein_id=WP_002212148.1;transl_table=11 NC_010634.1 RefSeq gene 3436502 3437461 . - . ID=gene3118;Name=YPTS_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15640;old_locus_tag=YPTS_3107 NC_010634.1 Protein Homology CDS 3436502 3437461 . - 0 ID=cds3026;Parent=gene3118;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NC_010634.1 RefSeq gene 3437474 3440956 . - . ID=gene3119;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPTS_RS15645;old_locus_tag=YPTS_3108 NC_010634.1 Protein Homology CDS 3437474 3440956 . - 0 ID=cds3027;Parent=gene3119;Dbxref=Genbank:WP_012104742.1;Name=WP_012104742.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_012104742.1;transl_table=11 NC_010634.1 RefSeq gene 3441119 3441715 . - . ID=gene3120;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YPTS_RS15650;old_locus_tag=YPTS_3109 NC_010634.1 Protein Homology CDS 3441119 3441715 . - 0 ID=cds3028;Parent=gene3120;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NC_010634.1 RefSeq gene 3441712 3442896 . - . ID=gene3121;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YPTS_RS15655;old_locus_tag=YPTS_3110 NC_010634.1 Protein Homology CDS 3441712 3442896 . - 0 ID=cds3029;Parent=gene3121;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NC_010634.1 RefSeq gene 3442900 3443688 . - . ID=gene3122;Name=YPTS_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15660;old_locus_tag=YPTS_3111 NC_010634.1 Protein Homology CDS 3442900 3443688 . - 0 ID=cds3030;Parent=gene3122;Dbxref=Genbank:WP_002212143.1;Name=WP_002212143.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NC_010634.1 RefSeq gene 3443692 3444222 . - . ID=gene3123;Name=YPTS_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15665;old_locus_tag=YPTS_3112 NC_010634.1 Protein Homology CDS 3443692 3444222 . - 0 ID=cds3031;Parent=gene3123;Dbxref=Genbank:WP_002217656.1;Name=WP_002217656.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002217656.1;transl_table=11 NC_010634.1 RefSeq gene 3444380 3445402 . - . ID=gene3124;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YPTS_RS15670;old_locus_tag=YPTS_3113 NC_010634.1 Protein Homology CDS 3444380 3445402 . - 0 ID=cds3032;Parent=gene3124;Dbxref=Genbank:WP_002212141.1;Name=WP_002212141.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002212141.1;transl_table=11 NC_010634.1 RefSeq gene 3445406 3445903 . - . ID=gene3125;Name=YPTS_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15675;old_locus_tag=YPTS_3114 NC_010634.1 Protein Homology CDS 3445406 3445903 . - 0 ID=cds3033;Parent=gene3125;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11 NC_010634.1 RefSeq gene 3446061 3448448 . - . ID=gene3126;Name=YPTS_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15680;old_locus_tag=YPTS_3115 NC_010634.1 Protein Homology CDS 3446061 3448448 . - 0 ID=cds3034;Parent=gene3126;Dbxref=Genbank:WP_002212139.1;Name=WP_002212139.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NC_010634.1 RefSeq gene 3448485 3449840 . - . ID=gene3127;Name=YPTS_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15685;old_locus_tag=YPTS_3116 NC_010634.1 Protein Homology CDS 3448485 3449840 . - 0 ID=cds3035;Parent=gene3127;Dbxref=Genbank:WP_002212138.1;Name=WP_002212138.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=protease RseP;protein_id=WP_002212138.1;transl_table=11 NC_010634.1 RefSeq gene 3449869 3450717 . - . ID=gene3128;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YPTS_RS15690;old_locus_tag=YPTS_3117 NC_010634.1 Protein Homology CDS 3449869 3450717 . - 0 ID=cds3036;Parent=gene3128;Dbxref=Genbank:WP_011192860.1;Name=WP_011192860.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_011192860.1;transl_table=11 NC_010634.1 RefSeq gene 3450727 3451485 . - . ID=gene3129;Name=YPTS_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15695;old_locus_tag=YPTS_3118 NC_010634.1 Protein Homology CDS 3450727 3451485 . - 0 ID=cds3037;Parent=gene3129;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11 NC_010634.1 RefSeq gene 3451709 3452905 . - . ID=gene3130;Name=YPTS_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15700;old_locus_tag=YPTS_3119 NC_010634.1 Protein Homology CDS 3451709 3452905 . - 0 ID=cds3038;Parent=gene3130;Dbxref=Genbank:WP_011192861.1;Name=WP_011192861.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_011192861.1;transl_table=11 NC_010634.1 RefSeq gene 3453119 3453676 . - . ID=gene3131;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YPTS_RS15705;old_locus_tag=YPTS_3120 NC_010634.1 Protein Homology CDS 3453119 3453676 . - 0 ID=cds3039;Parent=gene3131;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11 NC_010634.1 RefSeq gene 3453812 3454537 . - . ID=gene3132;Name=YPTS_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15710;old_locus_tag=YPTS_3121 NC_010634.1 Protein Homology CDS 3453812 3454537 . - 0 ID=cds3040;Parent=gene3132;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11 NC_010634.1 RefSeq gene 3454746 3455603 . - . ID=gene3133;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YPTS_RS15715;old_locus_tag=YPTS_3122 NC_010634.1 Protein Homology CDS 3454746 3455603 . - 0 ID=cds3041;Parent=gene3133;Dbxref=Genbank:WP_002212132.1;Name=WP_002212132.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NC_010634.1 RefSeq gene 3455731 3456456 . - . ID=gene3134;Name=YPTS_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15720;old_locus_tag=YPTS_3123 NC_010634.1 Protein Homology CDS 3455731 3456456 . - 0 ID=cds3042;Parent=gene3134;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NC_010634.1 RefSeq gene 3456891 3457682 . + . ID=gene3135;Name=YPTS_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15725;old_locus_tag=YPTS_3124 NC_010634.1 Protein Homology CDS 3456891 3457682 . + 0 ID=cds3043;Parent=gene3135;Dbxref=Genbank:WP_011192862.1;Name=WP_011192862.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_011192862.1;transl_table=11 NC_010634.1 RefSeq gene 3457742 3460423 . + . ID=gene3136;Name=YPTS_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15730;old_locus_tag=YPTS_3125 NC_010634.1 Protein Homology CDS 3457742 3460423 . + 0 ID=cds3044;Parent=gene3136;Dbxref=Genbank:WP_011192863.1;Name=WP_011192863.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_011192863.1;transl_table=11 NC_010634.1 RefSeq gene 3460598 3461422 . + . ID=gene3137;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YPTS_RS15735;old_locus_tag=YPTS_3126 NC_010634.1 Protein Homology CDS 3460598 3461422 . + 0 ID=cds3045;Parent=gene3137;Dbxref=Genbank:WP_011192864.1;Name=WP_011192864.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_011192864.1;transl_table=11 NC_010634.1 RefSeq gene 3461546 3461935 . + . ID=gene3138;Name=YPTS_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15740;old_locus_tag=YPTS_3127 NC_010634.1 Protein Homology CDS 3461546 3461935 . + 0 ID=cds3046;Parent=gene3138;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11 NC_010634.1 RefSeq gene 3462025 3462474 . - . ID=gene3139;Name=YPTS_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15745;old_locus_tag=YPTS_3128 NC_010634.1 Protein Homology CDS 3462025 3462474 . - 0 ID=cds3047;Parent=gene3139;Dbxref=Genbank:WP_011192865.1;Name=WP_011192865.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_011192865.1;transl_table=11 NC_010634.1 RefSeq gene 3462502 3463275 . - . ID=gene3140;Name=YPTS_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15750;old_locus_tag=YPTS_3129 NC_010634.1 Protein Homology CDS 3462502 3463275 . - 0 ID=cds3048;Parent=gene3140;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11 NC_010634.1 RefSeq gene 3463275 3463607 . - . ID=gene3141;Name=YPTS_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15755;old_locus_tag=YPTS_3130 NC_010634.1 Protein Homology CDS 3463275 3463607 . - 0 ID=cds3049;Parent=gene3141;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11 NC_010634.1 RefSeq gene 3463684 3463920 . + . ID=gene3142;Name=YPTS_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15760;old_locus_tag=YPTS_3131 NC_010634.1 GeneMarkS+ CDS 3463684 3463920 . + 0 ID=cds3050;Parent=gene3142;Dbxref=Genbank:WP_012413871.1;Name=WP_012413871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413871.1;transl_table=11 NC_010634.1 RefSeq gene 3464299 3464850 . - . ID=gene3143;Name=YPTS_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15765;old_locus_tag=YPTS_3132 NC_010634.1 Protein Homology CDS 3464299 3464850 . - 0 ID=cds3051;Parent=gene3143;Dbxref=Genbank:WP_002212123.1;Name=WP_002212123.1;gbkey=CDS;product=protein Syd;protein_id=WP_002212123.1;transl_table=11 NC_010634.1 RefSeq gene 3464982 3465827 . + . ID=gene3144;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YPTS_RS15770;old_locus_tag=YPTS_3133 NC_010634.1 Protein Homology CDS 3464982 3465827 . + 0 ID=cds3052;Parent=gene3144;Dbxref=Genbank:WP_011192866.1;Name=WP_011192866.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_011192866.1;transl_table=11 NC_010634.1 RefSeq gene 3465980 3467344 . + . ID=gene3145;Name=YPTS_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15775;old_locus_tag=YPTS_3134 NC_010634.1 Protein Homology CDS 3465980 3467344 . + 0 ID=cds3053;Parent=gene3145;Dbxref=Genbank:WP_011192867.1;Name=WP_011192867.1;gbkey=CDS;product=LOG family protein;protein_id=WP_011192867.1;transl_table=11 NC_010634.1 RefSeq gene 3467604 3468359 . + . ID=gene3146;Name=YPTS_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15780;old_locus_tag=YPTS_3135 NC_010634.1 Protein Homology CDS 3467604 3468359 . + 0 ID=cds3054;Parent=gene3146;Dbxref=Genbank:WP_011192868.1;Name=WP_011192868.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_011192868.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3468391 3468569 . + . ID=id228;gbkey=repeat_region NC_010634.1 RefSeq gene 3468610 3469716 . - . ID=gene3147;Name=YPTS_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15785;old_locus_tag=YPTS_3136 NC_010634.1 Protein Homology CDS 3468610 3469716 . - 0 ID=cds3055;Parent=gene3147;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11 NC_010634.1 RefSeq gene 3469709 3470089 . - . ID=gene3148;Name=YPTS_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15790;old_locus_tag=YPTS_3137 NC_010634.1 Protein Homology CDS 3469709 3470089 . - 0 ID=cds3056;Parent=gene3148;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11 NC_010634.1 RefSeq gene 3470270 3471187 . - . ID=gene3149;Name=YPTS_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15795;old_locus_tag=YPTS_3138 NC_010634.1 Protein Homology CDS 3470270 3471187 . - 0 ID=cds3057;Parent=gene3149;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11 NC_010634.1 RefSeq gene 3471847 3473052 . + . ID=gene3150;Name=YPTS_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15800;old_locus_tag=YPTS_3140 NC_010634.1 Protein Homology CDS 3471847 3473052 . + 0 ID=cds3058;Parent=gene3150;Dbxref=Genbank:WP_012303756.1;Name=WP_012303756.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_012303756.1;transl_table=11 NC_010634.1 RefSeq gene 3473185 3473628 . + . ID=gene3151;Name=YPTS_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15805;old_locus_tag=YPTS_3141 NC_010634.1 Protein Homology CDS 3473185 3473628 . + 0 ID=cds3059;Parent=gene3151;Dbxref=Genbank:WP_032467022.1;Name=WP_032467022.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_032467022.1;transl_table=11 NC_010634.1 RefSeq gene 3473664 3474491 . - . ID=gene3152;Name=YPTS_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15810;old_locus_tag=YPTS_3142 NC_010634.1 Protein Homology CDS 3473664 3474491 . - 0 ID=cds3060;Parent=gene3152;Dbxref=Genbank:WP_002212114.1;Name=WP_002212114.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_002212114.1;transl_table=11 NC_010634.1 RefSeq gene 3474634 3475806 . - . ID=gene3153;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YPTS_RS15815;old_locus_tag=YPTS_3143 NC_010634.1 Protein Homology CDS 3474634 3475806 . - 0 ID=cds3061;Parent=gene3153;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11 NC_010634.1 RefSeq gene 3476022 3476098 . + . ID=gene3154;Name=YPTS_RS15820;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS15820;old_locus_tag=YPTS_R0046 NC_010634.1 tRNAscan-SE tRNA 3476022 3476098 . + . ID=rna85;Parent=gene3154;anticodon=(pos:3476056..3476058);gbkey=tRNA;product=tRNA-Met NC_010634.1 tRNAscan-SE exon 3476022 3476098 . + . ID=id229;Parent=rna85;anticodon=(pos:3476056..3476058);gbkey=tRNA;product=tRNA-Met NC_010634.1 RefSeq gene 3476244 3476320 . + . ID=gene3155;Name=YPTS_RS15825;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS15825;old_locus_tag=YPTS_R0047 NC_010634.1 tRNAscan-SE tRNA 3476244 3476320 . + . ID=rna86;Parent=gene3155;anticodon=(pos:3476278..3476280);gbkey=tRNA;product=tRNA-Met NC_010634.1 tRNAscan-SE exon 3476244 3476320 . + . ID=id230;Parent=rna86;anticodon=(pos:3476278..3476280);gbkey=tRNA;product=tRNA-Met NC_010634.1 RefSeq gene 3476381 3476457 . + . ID=gene3156;Name=YPTS_RS15830;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS15830;old_locus_tag=YPTS_R0048 NC_010634.1 tRNAscan-SE tRNA 3476381 3476457 . + . ID=rna87;Parent=gene3156;anticodon=(pos:3476415..3476417);gbkey=tRNA;product=tRNA-Met NC_010634.1 tRNAscan-SE exon 3476381 3476457 . + . ID=id231;Parent=rna87;anticodon=(pos:3476415..3476417);gbkey=tRNA;product=tRNA-Met NC_010634.1 RefSeq gene 3476687 3477937 . - . ID=gene3157;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YPTS_RS15835;old_locus_tag=YPTS_3144 NC_010634.1 Protein Homology CDS 3476687 3477937 . - 0 ID=cds3062;Parent=gene3157;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11 NC_010634.1 RefSeq gene 3478173 3479498 . + . ID=gene3158;Name=YPTS_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15840;old_locus_tag=YPTS_3145 NC_010634.1 Protein Homology CDS 3478173 3479498 . + 0 ID=cds3063;Parent=gene3158;Dbxref=Genbank:WP_002211624.1;Name=WP_002211624.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=amino-acid acetyltransferase;protein_id=WP_002211624.1;transl_table=11 NC_010634.1 RefSeq gene 3479640 3481598 . - . ID=gene3159;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YPTS_RS15845;old_locus_tag=YPTS_3146 NC_010634.1 Protein Homology CDS 3479640 3481598 . - 0 ID=cds3064;Parent=gene3159;Dbxref=Genbank:WP_011192870.1;Name=WP_011192870.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_011192870.1;transl_table=11 NC_010634.1 RefSeq gene 3481595 3485257 . - . ID=gene3160;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=YPTS_RS15850;old_locus_tag=YPTS_3147 NC_010634.1 Protein Homology CDS 3481595 3485257 . - 0 ID=cds3065;Parent=gene3160;Dbxref=Genbank:WP_002215833.1;Name=WP_002215833.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_002215833.1;transl_table=11 NC_010634.1 RefSeq gene 3485254 3488142 . - . ID=gene3161;Name=YPTS_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15855;old_locus_tag=YPTS_3148 NC_010634.1 Protein Homology CDS 3485254 3488142 . - 0 ID=cds3066;Parent=gene3161;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11 NC_010634.1 RefSeq gene 3488224 3491595 . - . ID=gene3162;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YPTS_RS15860;old_locus_tag=YPTS_3149 NC_010634.1 Protein Homology CDS 3488224 3491595 . - 0 ID=cds3067;Parent=gene3162;Dbxref=Genbank:WP_011192871.1;Name=WP_011192871.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_011192871.1;transl_table=11 NC_010634.1 RefSeq gene 3491730 3492095 . - . ID=gene3163;Name=YPTS_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15865;old_locus_tag=YPTS_3150 NC_010634.1 Protein Homology CDS 3491730 3492095 . - 0 ID=cds3068;Parent=gene3163;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11 NC_010634.1 RefSeq gene 3492128 3492598 . - . ID=gene3164;Name=YPTS_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15870;old_locus_tag=YPTS_3151 NC_010634.1 Protein Homology CDS 3492128 3492598 . - 0 ID=cds3069;Parent=gene3164;Dbxref=Genbank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211629.1;transl_table=11 NC_010634.1 RefSeq gene 3492595 3493203 . - . ID=gene3165;Name=YPTS_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15875;old_locus_tag=YPTS_3152 NC_010634.1 Protein Homology CDS 3492595 3493203 . - 0 ID=cds3070;Parent=gene3165;Dbxref=Genbank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002211630.1;transl_table=11 NC_010634.1 RefSeq gene 3493194 3493763 . - . ID=gene3166;Name=YPTS_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15880;old_locus_tag=YPTS_3153 NC_010634.1 Protein Homology CDS 3493194 3493763 . - 0 ID=cds3071;Parent=gene3166;Dbxref=Genbank:WP_002228638.1;Name=WP_002228638.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002228638.1;transl_table=11 NC_010634.1 RefSeq gene 3493750 3493995 . - . ID=gene3167;Name=YPTS_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15885 NC_010634.1 Protein Homology CDS 3493750 3493995 . - 0 ID=cds3072;Parent=gene3167;Dbxref=Genbank:WP_012413872.1;Name=WP_012413872.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413872.1;transl_table=11 NC_010634.1 RefSeq gene 3494015 3494809 . - . ID=gene3168;Name=YPTS_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15890;old_locus_tag=YPTS_3155 NC_010634.1 Protein Homology CDS 3494015 3494809 . - 0 ID=cds3073;Parent=gene3168;Dbxref=Genbank:WP_011192873.1;Name=WP_011192873.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_011192873.1;transl_table=11 NC_010634.1 RefSeq gene 3494816 3495688 . - . ID=gene3169;Name=YPTS_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15895;old_locus_tag=YPTS_3156 NC_010634.1 Protein Homology CDS 3494816 3495688 . - 0 ID=cds3074;Parent=gene3169;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NC_010634.1 RefSeq gene 3495939 3498185 . - . ID=gene3170;Name=YPTS_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15900;old_locus_tag=YPTS_3157 NC_010634.1 Protein Homology CDS 3495939 3498185 . - 0 ID=cds3075;Parent=gene3170;Dbxref=Genbank:WP_011192874.1;Name=WP_011192874.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_011192874.1;transl_table=11 NC_010634.1 RefSeq gene 3498198 3498725 . - . ID=gene3171;Name=YPTS_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15905;old_locus_tag=YPTS_3158 NC_010634.1 Protein Homology CDS 3498198 3498725 . - 0 ID=cds3076;Parent=gene3171;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NC_010634.1 RefSeq gene 3498751 3499023 . - . ID=gene3172;Name=YPTS_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15910 NC_010634.1 Protein Homology CDS 3498751 3499023 . - 0 ID=cds3077;Parent=gene3172;Dbxref=Genbank:WP_032465962.1;Name=WP_032465962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465962.1;transl_table=11 NC_010634.1 RefSeq gene 3498998 3499189 . - . ID=gene3173;Name=YPTS_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15915 NC_010634.1 Protein Homology CDS 3498998 3499189 . - 0 ID=cds3078;Parent=gene3173;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11 NC_010634.1 RefSeq gene 3499422 3500108 . + . ID=gene3174;Name=YPTS_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15920;old_locus_tag=YPTS_3159 NC_010634.1 Protein Homology CDS 3499422 3500108 . + 0 ID=cds3079;Parent=gene3174;Dbxref=Genbank:WP_011192875.1;Name=WP_011192875.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_011192875.1;transl_table=11 NC_010634.1 RefSeq gene 3500479 3501519 . + . ID=gene3175;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YPTS_RS15925;old_locus_tag=YPTS_3160 NC_010634.1 Protein Homology CDS 3500479 3501519 . + 0 ID=cds3080;Parent=gene3175;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3501576 3501707 . + . ID=id232;gbkey=repeat_region NC_010634.1 RefSeq gene 3501896 3502147 . - . ID=gene3176;Name=YPTS_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15930;old_locus_tag=YPTS_3161 NC_010634.1 Protein Homology CDS 3501896 3502147 . - 0 ID=cds3081;Parent=gene3176;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NC_010634.1 RefSeq gene 3502226 3502459 . + . ID=gene3177;Name=YPTS_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15935;old_locus_tag=YPTS_3162 NC_010634.1 Protein Homology CDS 3502226 3502459 . + 0 ID=cds3082;Parent=gene3177;Dbxref=Genbank:WP_002228641.1;Name=WP_002228641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228641.1;transl_table=11 NC_010634.1 RefSeq gene 3502488 3503708 . - . ID=gene3178;Name=YPTS_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15940;old_locus_tag=YPTS_3163 NC_010634.1 Protein Homology CDS 3502488 3503708 . - 0 ID=cds3083;Parent=gene3178;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NC_010634.1 RefSeq gene 3503705 3505861 . - . ID=gene3179;Name=YPTS_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15945;old_locus_tag=YPTS_3164 NC_010634.1 Protein Homology CDS 3503705 3505861 . - 0 ID=cds3084;Parent=gene3179;Dbxref=Genbank:WP_011192876.1;Name=WP_011192876.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=bifunctional protein Aas;protein_id=WP_011192876.1;transl_table=11 NC_010634.1 RefSeq gene 3506310 3508571 . - . ID=gene3180;Name=YPTS_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15950;old_locus_tag=YPTS_3165 NC_010634.1 Protein Homology CDS 3506310 3508571 . - 0 ID=cds3085;Parent=gene3180;Dbxref=Genbank:WP_011192877.1;Name=WP_011192877.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_011192877.1;transl_table=11 NC_010634.1 RefSeq gene 3508861 3509883 . + . ID=gene3181;Name=YPTS_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15955;old_locus_tag=YPTS_3166 NC_010634.1 Protein Homology CDS 3508861 3509883 . + 0 ID=cds3086;Parent=gene3181;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11 NC_010634.1 RefSeq gene 3509880 3511142 . - . ID=gene3182;Name=YPTS_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15960;old_locus_tag=YPTS_3167 NC_010634.1 Protein Homology CDS 3509880 3511142 . - 0 ID=cds3087;Parent=gene3182;Dbxref=Genbank:WP_011192878.1;Name=WP_011192878.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_011192878.1;transl_table=11 NC_010634.1 RefSeq gene 3511358 3512299 . + . ID=gene3183;Name=YPTS_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15965;old_locus_tag=YPTS_3168 NC_010634.1 Protein Homology CDS 3511358 3512299 . + 0 ID=cds3088;Parent=gene3183;Dbxref=Genbank:WP_012413873.1;Name=WP_012413873.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012413873.1;transl_table=11 NC_010634.1 RefSeq gene 3512296 3513456 . - . ID=gene3184;Name=YPTS_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15970;old_locus_tag=YPTS_3169 NC_010634.1 Protein Homology CDS 3512296 3513456 . - 0 ID=cds3089;Parent=gene3184;Dbxref=Genbank:WP_012413874.1;Name=WP_012413874.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012413874.1;transl_table=11 NC_010634.1 RefSeq gene 3513841 3514749 . - . ID=gene3185;Name=YPTS_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15975;old_locus_tag=YPTS_3170 NC_010634.1 Protein Homology CDS 3513841 3514749 . - 0 ID=cds3090;Parent=gene3185;Dbxref=Genbank:WP_011192880.1;Name=WP_011192880.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011192880.1;transl_table=11 NC_010634.1 RefSeq gene 3514856 3515743 . + . ID=gene3186;Name=YPTS_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15980;old_locus_tag=YPTS_3171 NC_010634.1 Protein Homology CDS 3514856 3515743 . + 0 ID=cds3091;Parent=gene3186;Dbxref=Genbank:WP_002209850.1;Name=WP_002209850.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002209850.1;transl_table=11 NC_010634.1 RefSeq gene 3515856 3516491 . + . ID=gene3187;Name=YPTS_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15985;old_locus_tag=YPTS_3172 NC_010634.1 Protein Homology CDS 3515856 3516491 . + 0 ID=cds3092;Parent=gene3187;Dbxref=Genbank:WP_011192881.1;Name=WP_011192881.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_011192881.1;transl_table=11 NC_010634.1 RefSeq gene 3516477 3518168 . - . ID=gene3188;Name=YPTS_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15990;old_locus_tag=YPTS_3173 NC_010634.1 Protein Homology CDS 3516477 3518168 . - 0 ID=cds3093;Parent=gene3188;Dbxref=Genbank:WP_012413875.1;Name=WP_012413875.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_012413875.1;transl_table=11 NC_010634.1 RefSeq gene 3518323 3518724 . - . ID=gene3189;Name=YPTS_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS15995;old_locus_tag=YPTS_3174 NC_010634.1 Protein Homology CDS 3518323 3518724 . - 0 ID=cds3094;Parent=gene3189;Dbxref=Genbank:WP_032467021.1;Name=WP_032467021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467021.1;transl_table=11 NC_010634.1 RefSeq gene 3518781 3519440 . - . ID=gene3190;Name=YPTS_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16000;old_locus_tag=YPTS_3175 NC_010634.1 Protein Homology CDS 3518781 3519440 . - 0 ID=cds3095;Parent=gene3190;Dbxref=Genbank:WP_011192884.1;Name=WP_011192884.1;gbkey=CDS;product=regulatory membrane protein;protein_id=WP_011192884.1;transl_table=11 NC_010634.1 RefSeq gene 3519724 3520089 . + . ID=gene3191;Name=YPTS_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16005;old_locus_tag=YPTS_3176 NC_010634.1 Protein Homology CDS 3519724 3520089 . + 0 ID=cds3096;Parent=gene3191;Dbxref=Genbank:WP_002230661.1;Name=WP_002230661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230661.1;transl_table=11 NC_010634.1 RefSeq gene 3520073 3520912 . - . ID=gene3192;Name=YPTS_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16010;old_locus_tag=YPTS_3177 NC_010634.1 Protein Homology CDS 3520073 3520912 . - 0 ID=cds3097;Parent=gene3192;Dbxref=Genbank:WP_032467024.1;Name=WP_032467024.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_032467024.1;transl_table=11 NC_010634.1 RefSeq gene 3520941 3521390 . - . ID=gene3193;Name=YPTS_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16015;old_locus_tag=YPTS_3178 NC_010634.1 Protein Homology CDS 3520941 3521390 . - 0 ID=cds3098;Parent=gene3193;Dbxref=Genbank:WP_002226092.1;Name=WP_002226092.1;gbkey=CDS;product=membrane protein;protein_id=WP_002226092.1;transl_table=11 NC_010634.1 RefSeq gene 3521399 3522589 . - . ID=gene3194;Name=YPTS_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16020;old_locus_tag=YPTS_3179 NC_010634.1 Protein Homology CDS 3521399 3522589 . - 0 ID=cds3099;Parent=gene3194;Dbxref=Genbank:WP_002209858.1;Name=WP_002209858.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_002209858.1;transl_table=11 NC_010634.1 RefSeq gene 3522573 3523469 . - . ID=gene3195;Name=YPTS_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16025;old_locus_tag=YPTS_3180 NC_010634.1 Protein Homology CDS 3522573 3523469 . - 0 ID=cds3100;Parent=gene3195;Dbxref=Genbank:WP_042592928.1;Name=WP_042592928.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_042592928.1;transl_table=11 NC_010634.1 RefSeq gene 3523538 3524134 . - . ID=gene3196;Name=YPTS_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16030;old_locus_tag=YPTS_3181 NC_010634.1 Protein Homology CDS 3523538 3524134 . - 0 ID=cds3101;Parent=gene3196;Dbxref=Genbank:WP_011192887.1;Name=WP_011192887.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_011192887.1;transl_table=11 NC_010634.1 RefSeq gene 3524127 3524417 . - . ID=gene3197;Name=YPTS_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16035;old_locus_tag=YPTS_3182 NC_010634.1 Protein Homology CDS 3524127 3524417 . - 0 ID=cds3102;Parent=gene3197;Dbxref=Genbank:WP_012413876.1;Name=WP_012413876.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_012413876.1;transl_table=11 NC_010634.1 RefSeq gene 3524509 3525051 . - . ID=gene3198;Name=YPTS_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16040;old_locus_tag=YPTS_3183 NC_010634.1 Protein Homology CDS 3524509 3525051 . - 0 ID=cds3103;Parent=gene3198;Dbxref=Genbank:WP_011192889.1;Name=WP_011192889.1;gbkey=CDS;product=general secretion pathway protein GspH;protein_id=WP_011192889.1;transl_table=11 NC_010634.1 RefSeq gene 3525056 3525493 . - . ID=gene3199;Name=YPTS_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16045;old_locus_tag=YPTS_3184 NC_010634.1 Protein Homology CDS 3525056 3525493 . - 0 ID=cds3104;Parent=gene3199;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11 NC_010634.1 RefSeq gene 3525513 3526559 . - . ID=gene3200;Name=YPTS_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16050;old_locus_tag=YPTS_3185 NC_010634.1 Protein Homology CDS 3525513 3526559 . - 0 ID=cds3105;Parent=gene3200;Dbxref=Genbank:WP_002229014.1;Name=WP_002229014.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_002229014.1;transl_table=11 NC_010634.1 RefSeq gene 3526702 3528213 . - . ID=gene3201;Name=YPTS_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16055;old_locus_tag=YPTS_3186 NC_010634.1 Protein Homology CDS 3526702 3528213 . - 0 ID=cds3106;Parent=gene3201;Dbxref=Genbank:WP_002209863.1;Name=WP_002209863.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_002209863.1;transl_table=11 NC_010634.1 RefSeq gene 3528210 3530132 . - . ID=gene3202;Name=YPTS_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16060;old_locus_tag=YPTS_3187 NC_010634.1 Protein Homology CDS 3528210 3530132 . - 0 ID=cds3107;Parent=gene3202;Dbxref=Genbank:WP_011192891.1;Name=WP_011192891.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_011192891.1;transl_table=11 NC_010634.1 RefSeq gene 3530213 3530614 . - . ID=gene3203;Name=YPTS_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16065 NC_010634.1 Protein Homology CDS 3530213 3530614 . - 0 ID=cds3108;Parent=gene3203;Dbxref=Genbank:WP_032466598.1;Name=WP_032466598.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_032466598.1;transl_table=11 NC_010634.1 RefSeq gene 3530784 3531200 . - . ID=gene3204;Name=YPTS_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16070;old_locus_tag=YPTS_3189 NC_010634.1 Protein Homology CDS 3530784 3531200 . - 0 ID=cds3109;Parent=gene3204;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11 NC_010634.1 RefSeq gene 3531943 3532698 . - . ID=gene3205;Name=YPTS_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16075;old_locus_tag=YPTS_3190 NC_010634.1 Protein Homology CDS 3531943 3532698 . - 0 ID=cds3110;Parent=gene3205;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NC_010634.1 RefSeq gene 3533193 3533381 . + . ID=gene3206;Name=YPTS_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16080;old_locus_tag=YPTS_3191 NC_010634.1 Protein Homology CDS 3533193 3533381 . + 0 ID=cds3111;Parent=gene3206;Dbxref=Genbank:WP_012104711.1;Name=WP_012104711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104711.1;transl_table=11 NC_010634.1 RefSeq gene 3533768 3533962 . + . ID=gene3207;Name=YPTS_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16085 NC_010634.1 Protein Homology CDS 3533768 3533962 . + 0 ID=cds3112;Parent=gene3207;Dbxref=Genbank:WP_002214083.1;Name=WP_002214083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214083.1;transl_table=11 NC_010634.1 RefSeq gene 3533984 3534934 . + . ID=gene3208;Name=YPTS_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16090;old_locus_tag=YPTS_3192 NC_010634.1 Protein Homology CDS 3533984 3534934 . + 0 ID=cds3113;Parent=gene3208;Dbxref=Genbank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209868.1;transl_table=11 NC_010634.1 RefSeq gene 3535049 3537235 . + . ID=gene3209;Name=YPTS_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16095;old_locus_tag=YPTS_3193 NC_010634.1 Protein Homology CDS 3535049 3537235 . + 0 ID=cds3114;Parent=gene3209;Dbxref=Genbank:WP_002209869.1;Name=WP_002209869.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209869.1;transl_table=11 NC_010634.1 RefSeq gene 3537305 3540418 . + . ID=gene3210;Name=YPTS_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16100;old_locus_tag=YPTS_3194 NC_010634.1 Protein Homology CDS 3537305 3540418 . + 0 ID=cds3115;Parent=gene3210;Dbxref=Genbank:WP_012413878.1;Name=WP_012413878.1;gbkey=CDS;product=chondroitin ABC lyase;protein_id=WP_012413878.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3540470 3540658 . + . ID=id233;gbkey=repeat_region NC_010634.1 RefSeq gene 3540858 3542411 . - . ID=gene3211;Name=YPTS_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16105;old_locus_tag=YPTS_3195 NC_010634.1 Protein Homology CDS 3540858 3542411 . - 0 ID=cds3116;Parent=gene3211;Dbxref=Genbank:WP_011192896.1;Name=WP_011192896.1;gbkey=CDS;product=sulfatase;protein_id=WP_011192896.1;transl_table=11 NC_010634.1 RefSeq gene 3543251 3544027 . + . ID=gene3212;Name=YPTS_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16110;old_locus_tag=YPTS_3196 NC_010634.1 Protein Homology CDS 3543251 3544027 . + 0 ID=cds3117;Parent=gene3212;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11 NC_010634.1 RefSeq gene 3544077 3545375 . + . ID=gene3213;Name=YPTS_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16115;old_locus_tag=YPTS_3197 NC_010634.1 Protein Homology CDS 3544077 3545375 . + 0 ID=cds3118;Parent=gene3213;Dbxref=Genbank:WP_012413879.1;Name=WP_012413879.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose-bisphosphate aldolase;protein_id=WP_012413879.1;transl_table=11 NC_010634.1 RefSeq gene 3545372 3546538 . + . ID=gene3214;Name=YPTS_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16120;old_locus_tag=YPTS_3198 NC_010634.1 Protein Homology CDS 3545372 3546538 . + 0 ID=cds3119;Parent=gene3214;Dbxref=Genbank:WP_012413880.1;Name=WP_012413880.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_012413880.1;transl_table=11 NC_010634.1 RefSeq gene 3546556 3547053 . + . ID=gene3215;Name=YPTS_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16125;old_locus_tag=YPTS_3199 NC_010634.1 Protein Homology CDS 3546556 3547053 . + 0 ID=cds3120;Parent=gene3215;Dbxref=Genbank:WP_002209878.1;Name=WP_002209878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NC_010634.1 RefSeq gene 3547100 3547888 . + . ID=gene3216;Name=YPTS_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16130;old_locus_tag=YPTS_3200 NC_010634.1 Protein Homology CDS 3547100 3547888 . + 0 ID=cds3121;Parent=gene3216;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NC_010634.1 RefSeq gene 3547878 3548768 . + . ID=gene3217;Name=YPTS_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16135;old_locus_tag=YPTS_3201 NC_010634.1 Protein Homology CDS 3547878 3548768 . + 0 ID=cds3122;Parent=gene3217;Dbxref=Genbank:WP_002209880.1;Name=WP_002209880.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NC_010634.1 RefSeq gene 3548854 3549294 . + . ID=gene3218;Name=YPTS_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16140;old_locus_tag=YPTS_3202 NC_010634.1 Protein Homology CDS 3548854 3549294 . + 0 ID=cds3123;Parent=gene3218;Dbxref=Genbank:WP_002209881.1;Name=WP_002209881.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_002209881.1;transl_table=11 NC_010634.1 RefSeq gene 3549297 3550463 . + . ID=gene3219;Name=YPTS_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16145;old_locus_tag=YPTS_3203 NC_010634.1 Protein Homology CDS 3549297 3550463 . + 0 ID=cds3124;Parent=gene3219;Dbxref=Genbank:WP_012413881.1;Name=WP_012413881.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_012413881.1;transl_table=11 NC_010634.1 RefSeq gene 3550659 3551414 . + . ID=gene3220;Name=YPTS_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16150;old_locus_tag=YPTS_3204 NC_010634.1 Protein Homology CDS 3550659 3551414 . + 0 ID=cds3125;Parent=gene3220;Dbxref=Genbank:WP_002230627.1;Name=WP_002230627.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002230627.1;transl_table=11 NC_010634.1 RefSeq gene 3551430 3552488 . + . ID=gene3221;Name=YPTS_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16155;old_locus_tag=YPTS_3205 NC_010634.1 Protein Homology CDS 3551430 3552488 . + 0 ID=cds3126;Parent=gene3221;Dbxref=Genbank:WP_012104703.1;Name=WP_012104703.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_012104703.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3552577 3552748 . + . ID=id234;gbkey=repeat_region NC_010634.1 RefSeq gene 3552919 3554145 . + . ID=gene3222;Name=YPTS_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16160;old_locus_tag=YPTS_3206 NC_010634.1 Protein Homology CDS 3552919 3554145 . + 0 ID=cds3127;Parent=gene3222;Dbxref=Genbank:WP_011192899.1;Name=WP_011192899.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_011192899.1;transl_table=11 NC_010634.1 RefSeq gene 3554166 3555773 . + . ID=gene3223;Name=YPTS_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16165;old_locus_tag=YPTS_3207 NC_010634.1 Protein Homology CDS 3554166 3555773 . + 0 ID=cds3128;Parent=gene3223;Dbxref=Genbank:WP_011192900.1;Name=WP_011192900.1;gbkey=CDS;product=sulfatase;protein_id=WP_011192900.1;transl_table=11 NC_010634.1 RefSeq gene 3555896 3557383 . + . ID=gene3224;Name=YPTS_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16170;old_locus_tag=YPTS_3209 NC_010634.1 Protein Homology CDS 3555896 3557383 . + 0 ID=cds3129;Parent=gene3224;Dbxref=Genbank:WP_011192901.1;Name=WP_011192901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192901.1;transl_table=11 NC_010634.1 RefSeq gene 3557494 3558348 . + . ID=gene3225;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=YPTS_RS16175;old_locus_tag=YPTS_3210 NC_010634.1 Protein Homology CDS 3557494 3558348 . + 0 ID=cds3130;Parent=gene3225;Dbxref=Genbank:WP_011192902.1;Name=WP_011192902.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_011192902.1;transl_table=11 NC_010634.1 RefSeq gene 3558372 3558950 . + . ID=gene3226;Name=YPTS_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16180;old_locus_tag=YPTS_3211 NC_010634.1 Protein Homology CDS 3558372 3558950 . + 0 ID=cds3131;Parent=gene3226;Dbxref=Genbank:WP_011192903.1;Name=WP_011192903.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_011192903.1;transl_table=11 NC_010634.1 RefSeq gene 3558920 3559201 . - . ID=gene3227;Name=YPTS_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16185;old_locus_tag=YPTS_3212 NC_010634.1 Protein Homology CDS 3558920 3559201 . - 0 ID=cds3132;Parent=gene3227;Dbxref=Genbank:WP_011192904.1;Name=WP_011192904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192904.1;transl_table=11 NC_010634.1 RefSeq gene 3559191 3560273 . - . ID=gene3228;Name=YPTS_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16190;old_locus_tag=YPTS_3213 NC_010634.1 Protein Homology CDS 3559191 3560273 . - 0 ID=cds3133;Parent=gene3228;Dbxref=Genbank:WP_002209890.1;Name=WP_002209890.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209890.1;transl_table=11 NC_010634.1 RefSeq gene 3560667 3561974 . + . ID=gene3229;Name=YPTS_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16195;old_locus_tag=YPTS_3214 NC_010634.1 Protein Homology CDS 3560667 3561974 . + 0 ID=cds3134;Parent=gene3229;Dbxref=Genbank:WP_011192905.1;Name=WP_011192905.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_011192905.1;transl_table=11 NC_010634.1 RefSeq gene 3562105 3564480 . + . ID=gene3230;Name=YPTS_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16200;old_locus_tag=YPTS_3215 NC_010634.1 Protein Homology CDS 3562105 3564480 . + 0 ID=cds3135;Parent=gene3230;Dbxref=Genbank:WP_012413883.1;Name=WP_012413883.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_012413883.1;transl_table=11 NC_010634.1 RefSeq gene 3564619 3565692 . - . ID=gene3231;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YPTS_RS16205;old_locus_tag=YPTS_3216 NC_010634.1 Protein Homology CDS 3564619 3565692 . - 0 ID=cds3136;Parent=gene3231;Dbxref=Genbank:WP_002209894.1;Name=WP_002209894.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_002209894.1;transl_table=11 NC_010634.1 RefSeq gene 3565964 3567223 . + . ID=gene3232;Name=YPTS_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16210;old_locus_tag=YPTS_3217 NC_010634.1 Protein Homology CDS 3565964 3567223 . + 0 ID=cds3137;Parent=gene3232;Dbxref=Genbank:WP_011192907.1;Name=WP_011192907.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_011192907.1;transl_table=11 NC_010634.1 RefSeq gene 3567644 3567955 . - . ID=gene3233;Name=YPTS_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16215;old_locus_tag=YPTS_3218 NC_010634.1 Protein Homology CDS 3567644 3567955 . - 0 ID=cds3138;Parent=gene3233;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11 NC_010634.1 RefSeq gene 3568067 3570127 . - . ID=gene3234;Name=YPTS_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16220;old_locus_tag=YPTS_3219 NC_010634.1 Protein Homology CDS 3568067 3570127 . - 0 ID=cds3139;Parent=gene3234;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NC_010634.1 RefSeq gene 3570178 3571380 . - . ID=gene3235;Name=YPTS_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16225;old_locus_tag=YPTS_3220 NC_010634.1 Protein Homology CDS 3570178 3571380 . - 0 ID=cds3140;Parent=gene3235;Dbxref=Genbank:WP_002209898.1;Name=WP_002209898.1;gbkey=CDS;product=galactosidase;protein_id=WP_002209898.1;transl_table=11 NC_010634.1 RefSeq gene 3571385 3572236 . - . ID=gene3236;Name=YPTS_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16230;old_locus_tag=YPTS_3221 NC_010634.1 Protein Homology CDS 3571385 3572236 . - 0 ID=cds3141;Parent=gene3236;Dbxref=Genbank:WP_002209899.1;Name=WP_002209899.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NC_010634.1 RefSeq gene 3572248 3573555 . - . ID=gene3237;Name=YPTS_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16235;old_locus_tag=YPTS_3222 NC_010634.1 Protein Homology CDS 3572248 3573555 . - 0 ID=cds3142;Parent=gene3237;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NC_010634.1 RefSeq gene 3573715 3574950 . - . ID=gene3238;Name=YPTS_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16240;old_locus_tag=YPTS_3223 NC_010634.1 Protein Homology CDS 3573715 3574950 . - 0 ID=cds3143;Parent=gene3238;Dbxref=Genbank:WP_012104695.1;Name=WP_012104695.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_012104695.1;transl_table=11 NC_010634.1 RefSeq gene 3575313 3576419 . + . ID=gene3239;Name=YPTS_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16245;old_locus_tag=YPTS_3224 NC_010634.1 Protein Homology CDS 3575313 3576419 . + 0 ID=cds3144;Parent=gene3239;Dbxref=Genbank:WP_002223743.1;Name=WP_002223743.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002223743.1;transl_table=11 NC_010634.1 RefSeq gene 3576948 3578456 . + . ID=gene3240;Name=YPTS_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16250;old_locus_tag=YPTS_3225 NC_010634.1 Protein Homology CDS 3576948 3578456 . + 0 ID=cds3145;Parent=gene3240;Dbxref=Genbank:WP_012104694.1;Name=WP_012104694.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=enolase;protein_id=WP_012104694.1;transl_table=11 NC_010634.1 RefSeq gene 3578527 3579531 . + . ID=gene3241;Name=YPTS_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16255;old_locus_tag=YPTS_3226 NC_010634.1 Protein Homology CDS 3578527 3579531 . + 0 ID=cds3146;Parent=gene3241;Dbxref=Genbank:WP_032467017.1;Name=WP_032467017.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_032467017.1;transl_table=11 NC_010634.1 RefSeq gene 3579950 3580951 . + . ID=gene3242;Name=YPTS_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16260;old_locus_tag=YPTS_3227 NC_010634.1 Protein Homology CDS 3579950 3580951 . + 0 ID=cds3147;Parent=gene3242;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11 NC_010634.1 RefSeq gene 3581730 3582248 . + . ID=gene3243;Name=YPTS_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16265;old_locus_tag=YPTS_3228 NC_010634.1 Protein Homology CDS 3581730 3582248 . + 0 ID=cds3148;Parent=gene3243;Dbxref=Genbank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11 NC_010634.1 RefSeq gene 3582624 3583481 . + . ID=gene3244;Name=YPTS_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16270;old_locus_tag=YPTS_3229 NC_010634.1 Protein Homology CDS 3582624 3583481 . + 0 ID=cds3149;Parent=gene3244;Dbxref=Genbank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209908.1;transl_table=11 NC_010634.1 RefSeq gene 3583924 3584604 . + . ID=gene3245;Name=YPTS_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16275;old_locus_tag=YPTS_3230 NC_010634.1 Protein Homology CDS 3583924 3584604 . + 0 ID=cds3150;Parent=gene3245;Dbxref=Genbank:WP_011192909.1;Name=WP_011192909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_011192909.1;transl_table=11 NC_010634.1 RefSeq gene 3584604 3584924 . + . ID=gene3246;Name=YPTS_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16280;old_locus_tag=YPTS_3231 NC_010634.1 Protein Homology CDS 3584604 3584924 . + 0 ID=cds3151;Parent=gene3246;Dbxref=Genbank:WP_011192910.1;Name=WP_011192910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192910.1;transl_table=11 NC_010634.1 RefSeq gene 3585023 3585289 . - . ID=gene3247;Name=YPTS_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16285;old_locus_tag=YPTS_3232 NC_010634.1 Protein Homology CDS 3585023 3585289 . - 0 ID=cds3152;Parent=gene3247;Dbxref=Genbank:WP_002209911.1;Name=WP_002209911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209911.1;transl_table=11 NC_010634.1 RefSeq gene 3585545 3586324 . - . ID=gene3248;Name=YPTS_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16290;old_locus_tag=YPTS_3233 NC_010634.1 Protein Homology CDS 3585545 3586324 . - 0 ID=cds3153;Parent=gene3248;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11 NC_010634.1 RefSeq gene 3586405 3586617 . - . ID=gene3249;Name=YPTS_RS16295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS16295;pseudo=true NC_010634.1 Protein Homology CDS 3586405 3586617 . - 0 ID=cds3154;Parent=gene3249;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3586525..3586527)%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 3586929 3587696 . - . ID=gene3250;Name=YPTS_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16300;old_locus_tag=YPTS_3234 NC_010634.1 Protein Homology CDS 3586929 3587696 . - 0 ID=cds3155;Parent=gene3250;Dbxref=Genbank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209913.1;transl_table=11 NC_010634.1 RefSeq gene 3587666 3589825 . - . ID=gene3251;Name=YPTS_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16305;old_locus_tag=YPTS_3235 NC_010634.1 Protein Homology CDS 3587666 3589825 . - 0 ID=cds3156;Parent=gene3251;Dbxref=Genbank:WP_012413884.1;Name=WP_012413884.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413884.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3590062 3590425 . + . ID=id235;gbkey=repeat_region NC_010634.1 RefSeq gene 3590235 3590519 . - . ID=gene3252;Name=YPTS_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16310;old_locus_tag=YPTS_3236 NC_010634.1 Protein Homology CDS 3590235 3590519 . - 0 ID=cds3157;Parent=gene3252;Dbxref=Genbank:WP_011192913.1;Name=WP_011192913.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_011192913.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3590556 3590766 . + . ID=id236;gbkey=repeat_region NC_010634.1 RefSeq gene 3590566 3590769 . - . ID=gene3253;Name=YPTS_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16315;old_locus_tag=YPTS_3237 NC_010634.1 Protein Homology CDS 3590566 3590769 . - 0 ID=cds3158;Parent=gene3253;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NC_010634.1 RefSeq gene 3591142 3591336 . - . ID=gene3254;Name=YPTS_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16320;old_locus_tag=YPTS_3238 NC_010634.1 Protein Homology CDS 3591142 3591336 . - 0 ID=cds3159;Parent=gene3254;Dbxref=Genbank:WP_033852438.1;Name=WP_033852438.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033852438.1;transl_table=11 NC_010634.1 RefSeq gene 3591336 3592868 . - . ID=gene3255;Name=YPTS_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16325;old_locus_tag=YPTS_3239 NC_010634.1 Protein Homology CDS 3591336 3592868 . - 0 ID=cds3160;Parent=gene3255;Dbxref=Genbank:WP_011192914.1;Name=WP_011192914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192914.1;transl_table=11 NC_010634.1 RefSeq gene 3593374 3594516 . - . ID=gene3256;Name=YPTS_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16330;old_locus_tag=YPTS_3240 NC_010634.1 Protein Homology CDS 3593374 3594516 . - 0 ID=cds3161;Parent=gene3256;Dbxref=Genbank:WP_002209918.1;Name=WP_002209918.1;gbkey=CDS;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11 NC_010634.1 RefSeq gene 3594785 3595150 . + . ID=gene3257;Name=YPTS_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16335;old_locus_tag=YPTS_3241 NC_010634.1 Protein Homology CDS 3594785 3595150 . + 0 ID=cds3162;Parent=gene3257;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NC_010634.1 RefSeq gene 3595163 3595396 . + . ID=gene3258;Name=YPTS_RS16340;end_range=3595396,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS16340;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 3595163 3595396 . + 0 ID=cds3163;Parent=gene3258;end_range=3595396,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 3595511 3595843 . + . ID=gene3259;Name=YPTS_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16345 NC_010634.1 Protein Homology CDS 3595511 3595843 . + 0 ID=cds3164;Parent=gene3259;Dbxref=Genbank:WP_038835201.1;Name=WP_038835201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038835201.1;transl_table=11 NC_010634.1 RefSeq gene 3596025 3596225 . + . ID=gene3260;Name=YPTS_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16350;old_locus_tag=YPTS_3243 NC_010634.1 Protein Homology CDS 3596025 3596225 . + 0 ID=cds3165;Parent=gene3260;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11 NC_010634.1 RefSeq gene 3596239 3596391 . - . ID=gene3261;Name=YPTS_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16355;old_locus_tag=YPTS_3244 NC_010634.1 Protein Homology CDS 3596239 3596391 . - 0 ID=cds3166;Parent=gene3261;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NC_010634.1 RefSeq gene 3596384 3596710 . - . ID=gene3262;Name=YPTS_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16360;old_locus_tag=YPTS_3245 NC_010634.1 Protein Homology CDS 3596384 3596710 . - 0 ID=cds3167;Parent=gene3262;Dbxref=Genbank:WP_011192917.1;Name=WP_011192917.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192917.1;transl_table=11 NC_010634.1 RefSeq gene 3597010 3599301 . + . ID=gene3263;Name=YPTS_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16365;old_locus_tag=YPTS_3246 NC_010634.1 Protein Homology CDS 3597010 3599301 . + 0 ID=cds3168;Parent=gene3263;Dbxref=Genbank:WP_012413886.1;Name=WP_012413886.1;gbkey=CDS;product=DNA primase;protein_id=WP_012413886.1;transl_table=11 NC_010634.1 RefSeq gene 3599701 3600099 . - . ID=gene3264;Name=YPTS_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16370;old_locus_tag=YPTS_3247 NC_010634.1 Protein Homology CDS 3599701 3600099 . - 0 ID=cds3169;Parent=gene3264;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11 NC_010634.1 RefSeq gene 3600099 3600395 . - . ID=gene3265;Name=YPTS_RS16375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS16375;pseudo=true NC_010634.1 Protein Homology CDS 3600099 3600395 . - 0 ID=cds3170;Parent=gene3265;gbkey=CDS;product=mRNA interferase MqsR;pseudo=true;transl_except=(pos:complement(3600351..3600353)%2Caa:Other);transl_table=11 NC_010634.1 RefSeq gene 3600559 3600921 . - . ID=gene3266;Name=YPTS_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16380;old_locus_tag=YPTS_3249 NC_010634.1 Protein Homology CDS 3600559 3600921 . - 0 ID=cds3171;Parent=gene3266;Dbxref=Genbank:WP_011192920.1;Name=WP_011192920.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_011192920.1;transl_table=11 NC_010634.1 RefSeq gene 3600984 3601244 . - . ID=gene3267;Name=YPTS_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16385;old_locus_tag=YPTS_3250 NC_010634.1 Protein Homology CDS 3600984 3601244 . - 0 ID=cds3172;Parent=gene3267;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11 NC_010634.1 RefSeq gene 3601616 3601741 . + . ID=gene3268;Name=YPTS_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16390 NC_010634.1 Protein Homology CDS 3601616 3601741 . + 0 ID=cds3173;Parent=gene3268;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11 NC_010634.1 RefSeq gene 3601842 3602027 . + . ID=gene3269;Name=YPTS_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16395;old_locus_tag=YPTS_3252 NC_010634.1 Protein Homology CDS 3601842 3602027 . + 0 ID=cds3174;Parent=gene3269;Dbxref=Genbank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11 NC_010634.1 RefSeq gene 3602169 3603152 . - . ID=gene3270;Name=YPTS_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16400;old_locus_tag=YPTS_3253 NC_010634.1 Protein Homology CDS 3602169 3603152 . - 0 ID=cds3175;Parent=gene3270;Dbxref=Genbank:WP_012413889.1;Name=WP_012413889.1;gbkey=CDS;product=integrase;protein_id=WP_012413889.1;transl_table=11 NC_010634.1 RefSeq gene 3603219 3603518 . - . ID=gene3271;Name=YPTS_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16405;old_locus_tag=YPTS_3254 NC_010634.1 Protein Homology CDS 3603219 3603518 . - 0 ID=cds3176;Parent=gene3271;Dbxref=Genbank:WP_012413890.1;Name=WP_012413890.1;gbkey=CDS;product=repressor;protein_id=WP_012413890.1;transl_table=11 NC_010634.1 RefSeq gene 3603632 3603904 . + . ID=gene3272;Name=YPTS_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16410;old_locus_tag=YPTS_3255 NC_010634.1 Protein Homology CDS 3603632 3603904 . + 0 ID=cds3177;Parent=gene3272;Dbxref=Genbank:WP_011192923.1;Name=WP_011192923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192923.1;transl_table=11 NC_010634.1 RefSeq gene 3603901 3604113 . + . ID=gene3273;Name=YPTS_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16415;old_locus_tag=YPTS_3256 NC_010634.1 Protein Homology CDS 3603901 3604113 . + 0 ID=cds3178;Parent=gene3273;Dbxref=Genbank:WP_012413891.1;Name=WP_012413891.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413891.1;transl_table=11 NC_010634.1 RefSeq gene 3604110 3604421 . + . ID=gene3274;Name=YPTS_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16420;old_locus_tag=YPTS_3257 NC_010634.1 Protein Homology CDS 3604110 3604421 . + 0 ID=cds3179;Parent=gene3274;Dbxref=Genbank:WP_012413892.1;Name=WP_012413892.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413892.1;transl_table=11 NC_010634.1 RefSeq gene 3604488 3604832 . + . ID=gene3275;Name=YPTS_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16425;old_locus_tag=YPTS_3258 NC_010634.1 GeneMarkS+ CDS 3604488 3604832 . + 0 ID=cds3180;Parent=gene3275;Dbxref=Genbank:WP_012413893.1;Name=WP_012413893.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413893.1;transl_table=11 NC_010634.1 RefSeq gene 3604836 3605039 . - . ID=gene3276;Name=YPTS_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16430;old_locus_tag=YPTS_3259 NC_010634.1 GeneMarkS+ CDS 3604836 3605039 . - 0 ID=cds3181;Parent=gene3276;Dbxref=Genbank:WP_012413894.1;Name=WP_012413894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413894.1;transl_table=11 NC_010634.1 RefSeq gene 3605182 3605403 . + . ID=gene3277;Name=YPTS_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16435;old_locus_tag=YPTS_3260 NC_010634.1 Protein Homology CDS 3605182 3605403 . + 0 ID=cds3182;Parent=gene3277;Dbxref=Genbank:WP_012413895.1;Name=WP_012413895.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413895.1;transl_table=11 NC_010634.1 RefSeq gene 3605412 3605762 . + . ID=gene3278;Name=YPTS_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16440;old_locus_tag=YPTS_3261 NC_010634.1 Protein Homology CDS 3605412 3605762 . + 0 ID=cds3183;Parent=gene3278;Dbxref=Genbank:WP_012413896.1;Name=WP_012413896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413896.1;transl_table=11 NC_010634.1 RefSeq gene 3605834 3606070 . + . ID=gene3279;Name=YPTS_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16445;old_locus_tag=YPTS_3262 NC_010634.1 Protein Homology CDS 3605834 3606070 . + 0 ID=cds3184;Parent=gene3279;Dbxref=Genbank:WP_012413897.1;Name=WP_012413897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413897.1;transl_table=11 NC_010634.1 RefSeq gene 3606070 3606735 . + . ID=gene3280;Name=YPTS_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21645;old_locus_tag=YPTS_3263 NC_010634.1 Protein Homology CDS 3606070 3606735 . + 0 ID=cds3185;Parent=gene3280;Dbxref=Genbank:WP_012413898.1;Name=WP_012413898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413898.1;transl_table=11 NC_010634.1 RefSeq gene 3606745 3607446 . + . ID=gene3281;Name=YPTS_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16455;old_locus_tag=YPTS_3264 NC_010634.1 Protein Homology CDS 3606745 3607446 . + 0 ID=cds3186;Parent=gene3281;Dbxref=Genbank:WP_011192928.1;Name=WP_011192928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192928.1;transl_table=11 NC_010634.1 RefSeq gene 3607443 3607796 . + . ID=gene3282;Name=YPTS_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16460 NC_010634.1 Protein Homology CDS 3607443 3607796 . + 0 ID=cds3187;Parent=gene3282;Dbxref=Genbank:WP_012413899.1;Name=WP_012413899.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413899.1;transl_table=11 NC_010634.1 RefSeq gene 3607793 3610288 . + . ID=gene3283;Name=YPTS_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16465;old_locus_tag=YPTS_3266 NC_010634.1 Protein Homology CDS 3607793 3610288 . + 0 ID=cds3188;Parent=gene3283;Dbxref=Genbank:WP_012413900.1;Name=WP_012413900.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413900.1;transl_table=11 NC_010634.1 RefSeq gene 3610304 3610633 . - . ID=gene3284;Name=YPTS_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16470;old_locus_tag=YPTS_3267 NC_010634.1 Protein Homology CDS 3610304 3610633 . - 0 ID=cds3189;Parent=gene3284;Dbxref=Genbank:WP_012413901.1;Name=WP_012413901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413901.1;transl_table=11 NC_010634.1 RefSeq gene 3610637 3611434 . - . ID=gene3285;Name=YPTS_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16475;old_locus_tag=YPTS_3268 NC_010634.1 Protein Homology CDS 3610637 3611434 . - 0 ID=cds3190;Parent=gene3285;Dbxref=Genbank:WP_012413902.1;Name=WP_012413902.1;gbkey=CDS;product=portal protein;protein_id=WP_012413902.1;transl_table=11 NC_010634.1 RefSeq gene 3611415 3613592 . - . ID=gene3286;Name=YPTS_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16480;old_locus_tag=YPTS_3269 NC_010634.1 Protein Homology CDS 3611415 3613592 . - 0 ID=cds3191;Parent=gene3286;Dbxref=Genbank:WP_012413903.1;Name=WP_012413903.1;gbkey=CDS;product=terminase;protein_id=WP_012413903.1;transl_table=11 NC_010634.1 RefSeq gene 3613770 3614705 . + . ID=gene3287;Name=YPTS_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16485;old_locus_tag=YPTS_3270 NC_010634.1 Protein Homology CDS 3613770 3614705 . + 0 ID=cds3192;Parent=gene3287;Dbxref=Genbank:WP_012413904.1;Name=WP_012413904.1;gbkey=CDS;product=phage capsid scaffolding protein;protein_id=WP_012413904.1;transl_table=11 NC_010634.1 RefSeq gene 3614788 3615954 . + . ID=gene3288;Name=YPTS_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16490;old_locus_tag=YPTS_3271 NC_010634.1 Protein Homology CDS 3614788 3615954 . + 0 ID=cds3193;Parent=gene3288;Dbxref=Genbank:WP_012413905.1;Name=WP_012413905.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_012413905.1;transl_table=11 NC_010634.1 RefSeq gene 3615969 3616712 . + . ID=gene3289;Name=YPTS_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16495;old_locus_tag=YPTS_3272 NC_010634.1 Protein Homology CDS 3615969 3616712 . + 0 ID=cds3194;Parent=gene3289;Dbxref=Genbank:WP_012413906.1;Name=WP_012413906.1;gbkey=CDS;product=terminase;protein_id=WP_012413906.1;transl_table=11 NC_010634.1 RefSeq gene 3616832 3617284 . + . ID=gene3290;Name=YPTS_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16500;old_locus_tag=YPTS_3273 NC_010634.1 Protein Homology CDS 3616832 3617284 . + 0 ID=cds3195;Parent=gene3290;Dbxref=Genbank:WP_012303715.1;Name=WP_012303715.1;gbkey=CDS;product=head completion protein;protein_id=WP_012303715.1;transl_table=11 NC_010634.1 RefSeq gene 3617281 3617787 . + . ID=gene3291;Name=YPTS_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16505;old_locus_tag=YPTS_3274 NC_010634.1 Protein Homology CDS 3617281 3617787 . + 0 ID=cds3196;Parent=gene3291;Dbxref=Genbank:WP_012413907.1;Name=WP_012413907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413907.1;transl_table=11 NC_010634.1 RefSeq gene 3617747 3618448 . + . ID=gene3292;Name=YPTS_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16510;old_locus_tag=YPTS_3275 NC_010634.1 Protein Homology CDS 3617747 3618448 . + 0 ID=cds3197;Parent=gene3292;Dbxref=Genbank:WP_012303713.1;Name=WP_012303713.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303713.1;transl_table=11 NC_010634.1 RefSeq gene 3618445 3619611 . + . ID=gene3293;Name=YPTS_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16515;old_locus_tag=YPTS_3276 NC_010634.1 Protein Homology CDS 3618445 3619611 . + 0 ID=cds3198;Parent=gene3293;Dbxref=Genbank:WP_012413908.1;Name=WP_012413908.1;gbkey=CDS;product=phage tail protein;protein_id=WP_012413908.1;transl_table=11 NC_010634.1 RefSeq gene 3619614 3620069 . + . ID=gene3294;Name=YPTS_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16520;old_locus_tag=YPTS_3277 NC_010634.1 Protein Homology CDS 3619614 3620069 . + 0 ID=cds3199;Parent=gene3294;Dbxref=Genbank:WP_011192940.1;Name=WP_011192940.1;gbkey=CDS;product=tail protein;protein_id=WP_011192940.1;transl_table=11 NC_010634.1 RefSeq gene 3620079 3620381 . + . ID=gene3295;Name=YPTS_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16525;old_locus_tag=YPTS_3278 NC_010634.1 Protein Homology CDS 3620079 3620381 . + 0 ID=cds3200;Parent=gene3295;Dbxref=Genbank:WP_012413909.1;Name=WP_012413909.1;gbkey=CDS;product=holin;protein_id=WP_012413909.1;transl_table=11 NC_010634.1 RefSeq gene 3620378 3620719 . + . ID=gene3296;Name=YPTS_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16530;old_locus_tag=YPTS_3279 NC_010634.1 Protein Homology CDS 3620378 3620719 . + 0 ID=cds3201;Parent=gene3296;Dbxref=Genbank:WP_012413910.1;Name=WP_012413910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413910.1;transl_table=11 NC_010634.1 RefSeq gene 3620719 3621093 . + . ID=gene3297;Name=YPTS_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16535;old_locus_tag=YPTS_3280 NC_010634.1 Protein Homology CDS 3620719 3621093 . + 0 ID=cds3202;Parent=gene3297;Dbxref=Genbank:WP_012413911.1;Name=WP_012413911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413911.1;transl_table=11 NC_010634.1 RefSeq gene 3621208 3621483 . + . ID=gene3298;Name=YPTS_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16540;old_locus_tag=YPTS_3281 NC_010634.1 Protein Homology CDS 3621208 3621483 . + 0 ID=cds3203;Parent=gene3298;Dbxref=Genbank:WP_011192944.1;Name=WP_011192944.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192944.1;transl_table=11 NC_010634.1 RefSeq gene 3621528 3621707 . + . ID=gene3299;Name=YPTS_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16545;old_locus_tag=YPTS_3282 NC_010634.1 Protein Homology CDS 3621528 3621707 . + 0 ID=cds3204;Parent=gene3299;Dbxref=Genbank:WP_012413912.1;Name=WP_012413912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413912.1;transl_table=11 NC_010634.1 RefSeq gene 3621709 3623685 . + . ID=gene3300;Name=YPTS_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16550;old_locus_tag=YPTS_3283 NC_010634.1 Protein Homology CDS 3621709 3623685 . + 0 ID=cds3205;Parent=gene3300;Dbxref=Genbank:WP_012413913.1;Name=WP_012413913.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_012413913.1;transl_table=11 NC_010634.1 RefSeq gene 3623682 3624011 . + . ID=gene3301;Name=YPTS_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16555;old_locus_tag=YPTS_3284 NC_010634.1 Protein Homology CDS 3623682 3624011 . + 0 ID=cds3206;Parent=gene3301;Dbxref=Genbank:WP_012413914.1;Name=WP_012413914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413914.1;transl_table=11 NC_010634.1 RefSeq gene 3624008 3625192 . + . ID=gene3302;Name=YPTS_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16560;old_locus_tag=YPTS_3285 NC_010634.1 Protein Homology CDS 3624008 3625192 . + 0 ID=cds3207;Parent=gene3302;Dbxref=Genbank:WP_011192947.1;Name=WP_011192947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192947.1;transl_table=11 NC_010634.1 RefSeq gene 3625185 3625808 . + . ID=gene3303;Name=YPTS_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16565;old_locus_tag=YPTS_3286 NC_010634.1 Protein Homology CDS 3625185 3625808 . + 0 ID=cds3208;Parent=gene3303;Dbxref=Genbank:WP_011192948.1;Name=WP_011192948.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192948.1;transl_table=11 NC_010634.1 RefSeq gene 3625818 3627413 . + . ID=gene3304;Name=YPTS_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16570;old_locus_tag=YPTS_3287 NC_010634.1 Protein Homology CDS 3625818 3627413 . + 0 ID=cds3209;Parent=gene3304;Dbxref=Genbank:WP_012413915.1;Name=WP_012413915.1;gbkey=CDS;product=phage tail protein;protein_id=WP_012413915.1;transl_table=11 NC_010634.1 RefSeq gene 3627413 3627931 . + . ID=gene3305;Name=YPTS_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16575;old_locus_tag=YPTS_3288 NC_010634.1 Protein Homology CDS 3627413 3627931 . + 0 ID=cds3210;Parent=gene3305;Dbxref=Genbank:WP_012413916.1;Name=WP_012413916.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413916.1;transl_table=11 NC_010634.1 RefSeq gene 3627928 3628638 . + . ID=gene3306;Name=YPTS_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16580;old_locus_tag=YPTS_3289 NC_010634.1 Protein Homology CDS 3627928 3628638 . + 0 ID=cds3211;Parent=gene3306;Dbxref=Genbank:WP_042592930.1;Name=WP_042592930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592930.1;transl_table=11 NC_010634.1 RefSeq gene 3628631 3629185 . + . ID=gene3307;Name=YPTS_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16585;old_locus_tag=YPTS_3290 NC_010634.1 Protein Homology CDS 3628631 3629185 . + 0 ID=cds3212;Parent=gene3307;Dbxref=Genbank:WP_012303705.1;Name=WP_012303705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303705.1;transl_table=11 NC_010634.1 RefSeq gene 3629182 3630903 . + . ID=gene3308;Name=YPTS_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16590;old_locus_tag=YPTS_3291 NC_010634.1 Protein Homology CDS 3629182 3630903 . + 0 ID=cds3213;Parent=gene3308;Dbxref=Genbank:WP_012413918.1;Name=WP_012413918.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413918.1;transl_table=11 NC_010634.1 RefSeq gene 3631035 3631223 . - . ID=gene3309;Name=YPTS_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16595 NC_010634.1 GeneMarkS+ CDS 3631035 3631223 . - 0 ID=cds3214;Parent=gene3309;Dbxref=Genbank:WP_041175572.1;Name=WP_041175572.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175572.1;transl_table=11 NC_010634.1 RefSeq gene 3631258 3631620 . + . ID=gene3310;Name=YPTS_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16600;old_locus_tag=YPTS_3292 NC_010634.1 GeneMarkS+ CDS 3631258 3631620 . + 0 ID=cds3215;Parent=gene3310;Dbxref=Genbank:WP_012413919.1;Name=WP_012413919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413919.1;transl_table=11 NC_010634.1 RefSeq gene 3631726 3632940 . - . ID=gene3311;Name=YPTS_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16605;old_locus_tag=YPTS_3293 NC_010634.1 Protein Homology CDS 3631726 3632940 . - 0 ID=cds3216;Parent=gene3311;Dbxref=Genbank:WP_011192954.1;Name=WP_011192954.1;gbkey=CDS;product=integrase;protein_id=WP_011192954.1;transl_table=11 NC_010634.1 RefSeq gene 3633106 3633179 . - . ID=gene3312;Name=YPTS_RS16610;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS16610;old_locus_tag=YPTS_R0057 NC_010634.1 tRNAscan-SE tRNA 3633106 3633179 . - . ID=rna88;Parent=gene3312;anticodon=(pos:complement(3633145..3633147));gbkey=tRNA;product=tRNA-Gly NC_010634.1 tRNAscan-SE exon 3633106 3633179 . - . ID=id237;Parent=rna88;anticodon=(pos:complement(3633145..3633147));gbkey=tRNA;product=tRNA-Gly NC_010634.1 RefSeq gene 3633373 3634890 . - . ID=gene3313;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YPTS_RS16615;old_locus_tag=YPTS_3294 NC_010634.1 Protein Homology CDS 3633373 3634890 . - 0 ID=cds3217;Parent=gene3313;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NC_010634.1 RefSeq gene 3634900 3635832 . - . ID=gene3314;Name=YPTS_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16620;old_locus_tag=YPTS_3295 NC_010634.1 Protein Homology CDS 3634900 3635832 . - 0 ID=cds3218;Parent=gene3314;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11 NC_010634.1 RefSeq gene 3636177 3637910 . - . ID=gene3315;Name=YPTS_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16625;old_locus_tag=YPTS_3296 NC_010634.1 Protein Homology CDS 3636177 3637910 . - 0 ID=cds3219;Parent=gene3315;Dbxref=Genbank:WP_012413920.1;Name=WP_012413920.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_012413920.1;transl_table=11 NC_010634.1 RefSeq gene 3637917 3638633 . - . ID=gene3316;Name=YPTS_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16630;old_locus_tag=YPTS_3297 NC_010634.1 Protein Homology CDS 3637917 3638633 . - 0 ID=cds3220;Parent=gene3316;Dbxref=Genbank:WP_012413921.1;Name=WP_012413921.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_012413921.1;transl_table=11 NC_010634.1 RefSeq gene 3638664 3639563 . - . ID=gene3317;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YPTS_RS16635;old_locus_tag=YPTS_3298 NC_010634.1 Protein Homology CDS 3638664 3639563 . - 0 ID=cds3221;Parent=gene3317;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NC_010634.1 RefSeq gene 3639670 3640188 . + . ID=gene3318;Name=YPTS_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16640;old_locus_tag=YPTS_3299 NC_010634.1 Protein Homology CDS 3639670 3640188 . + 0 ID=cds3222;Parent=gene3318;Dbxref=Genbank:WP_002209934.1;Name=WP_002209934.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_002209934.1;transl_table=11 NC_010634.1 RefSeq gene 3640273 3641730 . - . ID=gene3319;Name=YPTS_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16645;old_locus_tag=YPTS_3300 NC_010634.1 Protein Homology CDS 3640273 3641730 . - 0 ID=cds3223;Parent=gene3319;Dbxref=Genbank:WP_032466588.1;Name=WP_032466588.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466588.1;transl_table=11 NC_010634.1 RefSeq gene 3641851 3643269 . - . ID=gene3320;Name=YPTS_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16650;old_locus_tag=YPTS_3301 NC_010634.1 Protein Homology CDS 3641851 3643269 . - 0 ID=cds3224;Parent=gene3320;Dbxref=Genbank:WP_012413923.1;Name=WP_012413923.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_012413923.1;transl_table=11 NC_010634.1 RefSeq gene 3643294 3643992 . - . ID=gene3321;Name=YPTS_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16655;old_locus_tag=YPTS_3302 NC_010634.1 Protein Homology CDS 3643294 3643992 . - 0 ID=cds3225;Parent=gene3321;Dbxref=Genbank:WP_002209937.1;Name=WP_002209937.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209937.1;transl_table=11 NC_010634.1 RefSeq gene 3643992 3644417 . - . ID=gene3322;Name=YPTS_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16660 NC_010634.1 Protein Homology CDS 3643992 3644417 . - 0 ID=cds3226;Parent=gene3322;Dbxref=Genbank:WP_012104676.1;Name=WP_012104676.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104676.1;transl_table=11 NC_010634.1 RefSeq gene 3644398 3644664 . - . ID=gene3323;Name=YPTS_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16665;old_locus_tag=YPTS_3304 NC_010634.1 Protein Homology CDS 3644398 3644664 . - 0 ID=cds3227;Parent=gene3323;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11 NC_010634.1 RefSeq gene 3644981 3645973 . + . ID=gene3324;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YPTS_RS16670;old_locus_tag=YPTS_3305 NC_010634.1 Protein Homology CDS 3644981 3645973 . + 0 ID=cds3228;Parent=gene3324;Dbxref=Genbank:WP_012413924.1;Name=WP_012413924.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_012413924.1;transl_table=11 NC_010634.1 RefSeq gene 3646046 3646543 . - . ID=gene3325;Name=YPTS_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16675;old_locus_tag=YPTS_3306 NC_010634.1 Protein Homology CDS 3646046 3646543 . - 0 ID=cds3229;Parent=gene3325;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11 NC_010634.1 RefSeq gene 3646818 3647519 . - . ID=gene3326;Name=YPTS_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16680;old_locus_tag=YPTS_3307 NC_010634.1 Protein Homology CDS 3646818 3647519 . - 0 ID=cds3230;Parent=gene3326;Dbxref=Genbank:WP_012413925.1;Name=WP_012413925.1;gbkey=CDS;product=hemolysin;protein_id=WP_012413925.1;transl_table=11 NC_010634.1 RefSeq gene 3647721 3648824 . - . ID=gene3327;Name=YPTS_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16685;old_locus_tag=YPTS_3308 NC_010634.1 Protein Homology CDS 3647721 3648824 . - 0 ID=cds3231;Parent=gene3327;Dbxref=Genbank:WP_012413926.1;Name=WP_012413926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413926.1;transl_table=11 NC_010634.1 RefSeq gene 3648928 3650925 . - . ID=gene3328;Name=YPTS_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16690;old_locus_tag=YPTS_3309 NC_010634.1 Protein Homology CDS 3648928 3650925 . - 0 ID=cds3232;Parent=gene3328;Dbxref=Genbank:WP_032467013.1;Name=WP_032467013.1;gbkey=CDS;product=membrane protein;protein_id=WP_032467013.1;transl_table=11 NC_010634.1 RefSeq gene 3650922 3651078 . - . ID=gene3329;Name=YPTS_RS16695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS16695;pseudo=true NC_010634.1 Protein Homology CDS 3650922 3651078 . - 0 ID=cds3233;Parent=gene3329;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemagglutinin;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 3652137 3652574 . - . ID=gene3330;Name=YPTS_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16700;old_locus_tag=YPTS_3310 NC_010634.1 Protein Homology CDS 3652137 3652574 . - 0 ID=cds3234;Parent=gene3330;Dbxref=Genbank:WP_002209946.1;Name=WP_002209946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209946.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3652749 3652918 . + . ID=id238;gbkey=repeat_region NC_010634.1 RefSeq gene 3652952 3655831 . - . ID=gene3331;Name=YPTS_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16705;old_locus_tag=YPTS_3311 NC_010634.1 Protein Homology CDS 3652952 3655831 . - 0 ID=cds3235;Parent=gene3331;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11 NC_010634.1 RefSeq gene 3656043 3656429 . - . ID=gene3332;Name=YPTS_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16710;old_locus_tag=YPTS_3312 NC_010634.1 Protein Homology CDS 3656043 3656429 . - 0 ID=cds3236;Parent=gene3332;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11 NC_010634.1 RefSeq gene 3656498 3657595 . - . ID=gene3333;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YPTS_RS16715;old_locus_tag=YPTS_3313 NC_010634.1 Protein Homology CDS 3656498 3657595 . - 0 ID=cds3237;Parent=gene3333;Dbxref=Genbank:WP_002209949.1;Name=WP_002209949.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_002209949.1;transl_table=11 NC_010634.1 RefSeq gene 3658293 3659513 . - . ID=gene3334;Name=YPTS_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16720;old_locus_tag=YPTS_3315 NC_010634.1 Protein Homology CDS 3658293 3659513 . - 0 ID=cds3238;Parent=gene3334;Dbxref=Genbank:WP_012104673.1;Name=WP_012104673.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_012104673.1;transl_table=11 NC_010634.1 RefSeq gene 3659686 3660864 . - . ID=gene3335;Name=YPTS_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16725;old_locus_tag=YPTS_3316 NC_010634.1 Protein Homology CDS 3659686 3660864 . - 0 ID=cds3239;Parent=gene3335;Dbxref=Genbank:WP_002209951.1;Name=WP_002209951.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209951.1;transl_table=11 NC_010634.1 RefSeq gene 3660916 3662229 . - . ID=gene3336;Name=YPTS_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16730;old_locus_tag=YPTS_3317 NC_010634.1 Protein Homology CDS 3660916 3662229 . - 0 ID=cds3240;Parent=gene3336;Dbxref=Genbank:WP_012413930.1;Name=WP_012413930.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_012413930.1;transl_table=11 NC_010634.1 RefSeq gene 3662317 3662895 . - . ID=gene3337;Name=YPTS_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16735;old_locus_tag=YPTS_3318 NC_010634.1 Protein Homology CDS 3662317 3662895 . - 0 ID=cds3241;Parent=gene3337;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11 NC_010634.1 RefSeq gene 3663232 3663561 . + . ID=gene3338;Name=YPTS_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16740;old_locus_tag=YPTS_3319 NC_010634.1 Protein Homology CDS 3663232 3663561 . + 0 ID=cds3242;Parent=gene3338;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NC_010634.1 RefSeq gene 3663907 3664503 . + . ID=gene3339;Name=YPTS_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16745;old_locus_tag=YPTS_3320 NC_010634.1 Protein Homology CDS 3663907 3664503 . + 0 ID=cds3243;Parent=gene3339;Dbxref=Genbank:WP_012413931.1;Name=WP_012413931.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_012413931.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3664555 3664725 . + . ID=id239;gbkey=repeat_region NC_010634.1 RefSeq gene 3664768 3666009 . - . ID=gene3340;Name=YPTS_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16750;old_locus_tag=YPTS_3321 NC_010634.1 Protein Homology CDS 3664768 3666009 . - 0 ID=cds3244;Parent=gene3340;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NC_010634.1 RefSeq gene 3666316 3666972 . - . ID=gene3341;Name=YPTS_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16755;old_locus_tag=YPTS_3322 NC_010634.1 Protein Homology CDS 3666316 3666972 . - 0 ID=cds3245;Parent=gene3341;Dbxref=Genbank:WP_002209957.1;Name=WP_002209957.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A 1;protein_id=WP_002209957.1;transl_table=11 NC_010634.1 RefSeq gene 3667314 3668222 . + . ID=gene3342;Name=YPTS_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16760;old_locus_tag=YPTS_3323 NC_010634.1 Protein Homology CDS 3667314 3668222 . + 0 ID=cds3246;Parent=gene3342;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11 NC_010634.1 RefSeq gene 3668233 3669012 . - . ID=gene3343;Name=YPTS_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16765;old_locus_tag=YPTS_3324 NC_010634.1 Protein Homology CDS 3668233 3669012 . - 0 ID=cds3247;Parent=gene3343;Dbxref=Genbank:WP_011192966.1;Name=WP_011192966.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192966.1;transl_table=11 NC_010634.1 RefSeq gene 3669202 3669819 . - . ID=gene3344;Name=YPTS_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16770;old_locus_tag=YPTS_3325 NC_010634.1 Protein Homology CDS 3669202 3669819 . - 0 ID=cds3248;Parent=gene3344;Dbxref=Genbank:WP_002209960.1;Name=WP_002209960.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein ArgO;protein_id=WP_002209960.1;transl_table=11 NC_010634.1 RefSeq gene 3670082 3670951 . - . ID=gene3345;Name=YPTS_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16775;old_locus_tag=YPTS_3326 NC_010634.1 Protein Homology CDS 3670082 3670951 . - 0 ID=cds3249;Parent=gene3345;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11 NC_010634.1 RefSeq gene 3671067 3671345 . + . ID=gene3346;Name=YPTS_RS16780;gbkey=Gene;gene_biotype=other;locus_tag=YPTS_RS16780 NC_010634.1 RefSeq repeat_region 3671175 3671343 . + . ID=id240;gbkey=repeat_region NC_010634.1 RefSeq gene 3671389 3672468 . - . ID=gene3347;Name=YPTS_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16785;old_locus_tag=YPTS_3327 NC_010634.1 Protein Homology CDS 3671389 3672468 . - 0 ID=cds3250;Parent=gene3347;Dbxref=Genbank:WP_012413932.1;Name=WP_012413932.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_012413932.1;transl_table=11 NC_010634.1 RefSeq gene 3672588 3673751 . - . ID=gene3348;Name=YPTS_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16790;old_locus_tag=YPTS_3328 NC_010634.1 Protein Homology CDS 3672588 3673751 . - 0 ID=cds3251;Parent=gene3348;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NC_010634.1 RefSeq gene 3673854 3674870 . - . ID=gene3349;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YPTS_RS16795;old_locus_tag=YPTS_3329 NC_010634.1 Protein Homology CDS 3673854 3674870 . - 0 ID=cds3252;Parent=gene3349;Dbxref=Genbank:WP_002209964.1;Name=WP_002209964.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NC_010634.1 RefSeq gene 3675267 3677261 . - . ID=gene3350;Name=YPTS_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16800;old_locus_tag=YPTS_3330 NC_010634.1 Protein Homology CDS 3675267 3677261 . - 0 ID=cds3253;Parent=gene3350;Dbxref=Genbank:WP_011192968.1;Name=WP_011192968.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_011192968.1;transl_table=11 NC_010634.1 RefSeq gene 3677735 3678487 . + . ID=gene3351;Name=YPTS_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16805;old_locus_tag=YPTS_3331 NC_010634.1 Protein Homology CDS 3677735 3678487 . + 0 ID=cds3254;Parent=gene3351;Dbxref=Genbank:WP_011192969.1;Name=WP_011192969.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192969.1;transl_table=11 NC_010634.1 RefSeq gene 3678592 3678912 . - . ID=gene3352;Name=YPTS_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16810;old_locus_tag=YPTS_3332 NC_010634.1 Protein Homology CDS 3678592 3678912 . - 0 ID=cds3255;Parent=gene3352;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11 NC_010634.1 RefSeq gene 3679072 3681051 . - . ID=gene3353;Name=YPTS_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16815;old_locus_tag=YPTS_3333 NC_010634.1 Protein Homology CDS 3679072 3681051 . - 0 ID=cds3256;Parent=gene3353;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NC_010634.1 RefSeq gene 3682258 3683412 . + . ID=gene3354;Name=YPTS_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16820;old_locus_tag=YPTS_3335 NC_010634.1 Protein Homology CDS 3682258 3683412 . + 0 ID=cds3257;Parent=gene3354;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11 NC_010634.1 RefSeq gene 3683605 3684117 . + . ID=gene3355;Name=YPTS_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16825;old_locus_tag=YPTS_3336 NC_010634.1 Protein Homology CDS 3683605 3684117 . + 0 ID=cds3258;Parent=gene3355;Dbxref=Genbank:WP_011192970.1;Name=WP_011192970.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_011192970.1;transl_table=11 NC_010634.1 RefSeq gene 3684215 3684922 . + . ID=gene3356;Name=YPTS_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16830;old_locus_tag=YPTS_3337 NC_010634.1 Protein Homology CDS 3684215 3684922 . + 0 ID=cds3259;Parent=gene3356;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11 NC_010634.1 RefSeq gene 3684901 3685128 . + . ID=gene3357;Name=YPTS_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16835 NC_010634.1 Protein Homology CDS 3684901 3685128 . + 0 ID=cds3260;Parent=gene3357;Dbxref=Genbank:WP_032465912.1;Name=WP_032465912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465912.1;transl_table=11 NC_010634.1 RefSeq gene 3685237 3685968 . + . ID=gene3358;Name=YPTS_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16840;old_locus_tag=YPTS_3339 NC_010634.1 Protein Homology CDS 3685237 3685968 . + 0 ID=cds3261;Parent=gene3358;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11 NC_010634.1 RefSeq gene 3685994 3686953 . + . ID=gene3359;Name=YPTS_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16845;old_locus_tag=YPTS_3340 NC_010634.1 Protein Homology CDS 3685994 3686953 . + 0 ID=cds3262;Parent=gene3359;Dbxref=Genbank:WP_002209976.1;Name=WP_002209976.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_002209976.1;transl_table=11 NC_010634.1 RefSeq gene 3687069 3687632 . + . ID=gene3360;Name=YPTS_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16850;old_locus_tag=YPTS_3341 NC_010634.1 Protein Homology CDS 3687069 3687632 . + 0 ID=cds3263;Parent=gene3360;Dbxref=Genbank:WP_011192971.1;Name=WP_011192971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192971.1;transl_table=11 NC_010634.1 RefSeq gene 3687632 3688054 . + . ID=gene3361;Name=YPTS_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16855;old_locus_tag=YPTS_3342 NC_010634.1 Protein Homology CDS 3687632 3688054 . + 0 ID=cds3264;Parent=gene3361;Dbxref=Genbank:WP_011192972.1;Name=WP_011192972.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_011192972.1;transl_table=11 NC_010634.1 RefSeq gene 3688234 3689118 . + . ID=gene3362;Name=YPTS_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16860;old_locus_tag=YPTS_3343 NC_010634.1 Protein Homology CDS 3688234 3689118 . + 0 ID=cds3265;Parent=gene3362;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NC_010634.1 RefSeq gene 3689122 3690237 . + . ID=gene3363;Name=YPTS_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16865;old_locus_tag=YPTS_3344 NC_010634.1 Protein Homology CDS 3689122 3690237 . + 0 ID=cds3266;Parent=gene3363;Dbxref=Genbank:WP_012413934.1;Name=WP_012413934.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_012413934.1;transl_table=11 NC_010634.1 RefSeq gene 3690346 3691470 . - . ID=gene3364;Name=YPTS_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16870;old_locus_tag=YPTS_3345 NC_010634.1 Protein Homology CDS 3690346 3691470 . - 0 ID=cds3267;Parent=gene3364;Dbxref=Genbank:WP_002209981.1;Name=WP_002209981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209981.1;transl_table=11 NC_010634.1 RefSeq gene 3691490 3692188 . + . ID=gene3365;Name=YPTS_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16875;old_locus_tag=YPTS_3346 NC_010634.1 Protein Homology CDS 3691490 3692188 . + 0 ID=cds3268;Parent=gene3365;Dbxref=Genbank:WP_011192973.1;Name=WP_011192973.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_011192973.1;transl_table=11 NC_010634.1 RefSeq gene 3692321 3693142 . + . ID=gene3366;Name=YPTS_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16880;old_locus_tag=YPTS_3347 NC_010634.1 Protein Homology CDS 3692321 3693142 . + 0 ID=cds3269;Parent=gene3366;Dbxref=Genbank:WP_012303648.1;Name=WP_012303648.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_012303648.1;transl_table=11 NC_010634.1 RefSeq gene 3693430 3693984 . + . ID=gene3367;Name=YPTS_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16885;old_locus_tag=YPTS_3349 NC_010634.1 Protein Homology CDS 3693430 3693984 . + 0 ID=cds3270;Parent=gene3367;Dbxref=Genbank:WP_012413935.1;Name=WP_012413935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413935.1;transl_table=11 NC_010634.1 RefSeq gene 3693981 3694271 . + . ID=gene3368;Name=YPTS_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16890;old_locus_tag=YPTS_3350 NC_010634.1 Protein Homology CDS 3693981 3694271 . + 0 ID=cds3271;Parent=gene3368;Dbxref=Genbank:WP_002215612.1;Name=WP_002215612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215612.1;transl_table=11 NC_010634.1 RefSeq gene 3694371 3694964 . + . ID=gene3369;Name=YPTS_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16895;old_locus_tag=YPTS_3351 NC_010634.1 Protein Homology CDS 3694371 3694964 . + 0 ID=cds3272;Parent=gene3369;Dbxref=Genbank:WP_012413936.1;Name=WP_012413936.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_012413936.1;transl_table=11 NC_010634.1 RefSeq gene 3694957 3696087 . + . ID=gene3370;Name=YPTS_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16900;old_locus_tag=YPTS_3352 NC_010634.1 Protein Homology CDS 3694957 3696087 . + 0 ID=cds3273;Parent=gene3370;Dbxref=Genbank:WP_012413937.1;Name=WP_012413937.1;gbkey=CDS;product=HemN family oxidoreductase;protein_id=WP_012413937.1;transl_table=11 NC_010634.1 RefSeq gene 3696277 3705609 . - . ID=gene3371;Name=YPTS_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16905;old_locus_tag=YPTS_3353 NC_010634.1 Protein Homology CDS 3696277 3705609 . - 0 ID=cds3274;Parent=gene3371;Dbxref=Genbank:WP_012413938.1;Name=WP_012413938.1;gbkey=CDS;product=pore forming RTX toxin family protein;protein_id=WP_012413938.1;transl_table=11 NC_010634.1 RefSeq gene 3706114 3706848 . - . ID=gene3372;Name=YPTS_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16910;old_locus_tag=YPTS_3354 NC_010634.1 Protein Homology CDS 3706114 3706848 . - 0 ID=cds3275;Parent=gene3372;Dbxref=Genbank:WP_012413939.1;Name=WP_012413939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413939.1;transl_table=11 NC_010634.1 RefSeq gene 3706960 3707886 . - . ID=gene3373;Name=YPTS_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16915;old_locus_tag=YPTS_3355 NC_010634.1 Protein Homology CDS 3706960 3707886 . - 0 ID=cds3276;Parent=gene3373;Dbxref=Genbank:WP_011192980.1;Name=WP_011192980.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_011192980.1;transl_table=11 NC_010634.1 RefSeq gene 3707997 3708323 . - . ID=gene3374;Name=YPTS_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16920;old_locus_tag=YPTS_3356 NC_010634.1 Protein Homology CDS 3707997 3708323 . - 0 ID=cds3277;Parent=gene3374;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11 NC_010634.1 RefSeq gene 3708323 3709042 . - . ID=gene3375;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=YPTS_RS16925;old_locus_tag=YPTS_3357 NC_010634.1 Protein Homology CDS 3708323 3709042 . - 0 ID=cds3278;Parent=gene3375;Dbxref=Genbank:WP_012104659.1;Name=WP_012104659.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_012104659.1;transl_table=11 NC_010634.1 RefSeq gene 3709455 3710570 . + . ID=gene3376;Name=YPTS_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16930;old_locus_tag=YPTS_3358 NC_010634.1 Protein Homology CDS 3709455 3710570 . + 0 ID=cds3279;Parent=gene3376;Dbxref=Genbank:WP_041175603.1;Name=WP_041175603.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_041175603.1;transl_table=11 NC_010634.1 RefSeq gene 3710748 3711020 . + . ID=gene3377;Name=YPTS_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16935;old_locus_tag=YPTS_3359 NC_010634.1 Protein Homology CDS 3710748 3711020 . + 0 ID=cds3280;Parent=gene3377;Dbxref=Genbank:WP_002230648.1;Name=WP_002230648.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002230648.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3711055 3711163 . + . ID=id241;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3711179 3711287 . + . ID=id242;gbkey=repeat_region NC_010634.1 RefSeq gene 3711327 3712403 . + . ID=gene3378;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YPTS_RS16940;old_locus_tag=YPTS_3360 NC_010634.1 Protein Homology CDS 3711327 3712403 . + 0 ID=cds3281;Parent=gene3378;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11 NC_010634.1 RefSeq gene 3712721 3713821 . + . ID=gene3379;Name=YPTS_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16945;old_locus_tag=YPTS_3362 NC_010634.1 Protein Homology CDS 3712721 3713821 . + 0 ID=cds3282;Parent=gene3379;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NC_010634.1 RefSeq gene 3713925 3715958 . + . ID=gene3380;Name=YPTS_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16950;old_locus_tag=YPTS_3363 NC_010634.1 Protein Homology CDS 3713925 3715958 . + 0 ID=cds3283;Parent=gene3380;Dbxref=Genbank:WP_032467010.1;Name=WP_032467010.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_032467010.1;transl_table=11 NC_010634.1 RefSeq gene 3716113 3717048 . - . ID=gene3381;Name=YPTS_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16955;old_locus_tag=YPTS_3364 NC_010634.1 Protein Homology CDS 3716113 3717048 . - 0 ID=cds3284;Parent=gene3381;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11 NC_010634.1 RefSeq gene 3717129 3718628 . - . ID=gene3382;Name=YPTS_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16960;old_locus_tag=YPTS_3365 NC_010634.1 Protein Homology CDS 3717129 3718628 . - 0 ID=cds3285;Parent=gene3382;Dbxref=Genbank:WP_011192984.1;Name=WP_011192984.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_011192984.1;transl_table=11 NC_010634.1 RefSeq gene 3718674 3719633 . - . ID=gene3383;Name=YPTS_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16965;old_locus_tag=YPTS_3366 NC_010634.1 Protein Homology CDS 3718674 3719633 . - 0 ID=cds3286;Parent=gene3383;Dbxref=Genbank:WP_011192985.1;Name=WP_011192985.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_011192985.1;transl_table=11 NC_010634.1 RefSeq gene 3720214 3722376 . - . ID=gene3384;Name=YPTS_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16970;old_locus_tag=YPTS_3367 NC_010634.1 Protein Homology CDS 3720214 3722376 . - 0 ID=cds3287;Parent=gene3384;Dbxref=Genbank:WP_012413942.1;Name=WP_012413942.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_012413942.1;transl_table=11 NC_010634.1 RefSeq gene 3723045 3723120 . + . ID=gene3385;Name=YPTS_RS16975;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS16975;old_locus_tag=YPTS_R0049 NC_010634.1 tRNAscan-SE tRNA 3723045 3723120 . + . ID=rna89;Parent=gene3385;anticodon=(pos:3723078..3723080);gbkey=tRNA;product=tRNA-Phe NC_010634.1 tRNAscan-SE exon 3723045 3723120 . + . ID=id243;Parent=rna89;anticodon=(pos:3723078..3723080);gbkey=tRNA;product=tRNA-Phe NC_010634.1 RefSeq gene 3723373 3723681 . - . ID=gene3386;Name=YPTS_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16980 NC_010634.1 Protein Homology CDS 3723373 3723681 . - 0 ID=cds3288;Parent=gene3386;Dbxref=Genbank:WP_002228972.1;Name=WP_002228972.1;gbkey=CDS;product=integrase;protein_id=WP_002228972.1;transl_table=11 NC_010634.1 RefSeq gene 3723705 3724340 . - . ID=gene3387;Name=YPTS_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16985;old_locus_tag=YPTS_3369 NC_010634.1 Protein Homology CDS 3723705 3724340 . - 0 ID=cds3289;Parent=gene3387;Dbxref=Genbank:WP_032467007.1;Name=WP_032467007.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_032467007.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3723741 3724946 . + . ID=id244;gbkey=repeat_region NC_010634.1 RefSeq gene 3724949 3725317 . - . ID=gene3388;Name=YPTS_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16990;old_locus_tag=YPTS_3370 NC_010634.1 Protein Homology CDS 3724949 3725317 . - 0 ID=cds3290;Parent=gene3388;Dbxref=Genbank:WP_012413944.1;Name=WP_012413944.1;gbkey=CDS;product=transposase;protein_id=WP_012413944.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3725073 3725707 . + . ID=id245;gbkey=repeat_region NC_010634.1 RefSeq gene 3725371 3725493 . - . ID=gene3389;Name=YPTS_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS16995 NC_010634.1 Protein Homology CDS 3725371 3725493 . - 0 ID=cds3291;Parent=gene3389;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NC_010634.1 RefSeq gene 3725742 3726509 . - . ID=gene3390;Name=YPTS_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17000;old_locus_tag=YPTS_3372 NC_010634.1 Protein Homology CDS 3725742 3726509 . - 0 ID=cds3292;Parent=gene3390;Dbxref=Genbank:WP_012413945.1;Name=WP_012413945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413945.1;transl_table=11 NC_010634.1 RefSeq gene 3726496 3728793 . - . ID=gene3391;Name=YPTS_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17005;old_locus_tag=YPTS_3373 NC_010634.1 Protein Homology CDS 3726496 3728793 . - 0 ID=cds3293;Parent=gene3391;Dbxref=Genbank:WP_011192988.1;Name=WP_011192988.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192988.1;transl_table=11 NC_010634.1 RefSeq gene 3728809 3729444 . - . ID=gene3392;Name=YPTS_RS17010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS17010;pseudo=true NC_010634.1 Protein Homology CDS 3728809 3729444 . - 0 ID=cds3294;Parent=gene3392;gbkey=CDS;product=type IV secretion protein Rhs;pseudo=true;transl_except=(pos:complement(3729340..3729342)%2Caa:Other);transl_table=11 NC_010634.1 RefSeq repeat_region 3728845 3730050 . + . ID=id246;gbkey=repeat_region NC_010634.1 RefSeq gene 3729977 3730312 . - . ID=gene3393;Name=YPTS_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17015 NC_010634.1 Protein Homology CDS 3729977 3730312 . - 0 ID=cds3295;Parent=gene3393;Dbxref=Genbank:WP_002216107.1;Name=WP_002216107.1;gbkey=CDS;product=transposase;protein_id=WP_002216107.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3730069 3730702 . + . ID=id247;gbkey=repeat_region NC_010634.1 RefSeq gene 3730366 3730488 . - . ID=gene3394;Name=YPTS_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17020 NC_010634.1 Protein Homology CDS 3730366 3730488 . - 0 ID=cds3296;Parent=gene3394;Dbxref=Genbank:WP_041175472.1;Name=WP_041175472.1;gbkey=CDS;product=transposase;protein_id=WP_041175472.1;transl_table=11 NC_010634.1 RefSeq gene 3730670 3730864 . - . ID=gene3395;Name=YPTS_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17025 NC_010634.1 Protein Homology CDS 3730670 3730864 . - 0 ID=cds3297;Parent=gene3395;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NC_010634.1 RefSeq gene 3731058 3731423 . - . ID=gene3396;Name=YPTS_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17030 NC_010634.1 Protein Homology CDS 3731058 3731423 . - 0 ID=cds3298;Parent=gene3396;Dbxref=Genbank:WP_041175604.1;Name=WP_041175604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175604.1;transl_table=11 NC_010634.1 RefSeq gene 3731568 3733790 . - . ID=gene3397;Name=YPTS_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17035;old_locus_tag=YPTS_3378 NC_010634.1 Protein Homology CDS 3731568 3733790 . - 0 ID=cds3299;Parent=gene3397;Dbxref=Genbank:WP_012413949.1;Name=WP_012413949.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_012413949.1;transl_table=11 NC_010634.1 RefSeq gene 3733805 3736153 . - . ID=gene3398;Name=YPTS_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17040;old_locus_tag=YPTS_3379 NC_010634.1 Protein Homology CDS 3733805 3736153 . - 0 ID=cds3300;Parent=gene3398;Dbxref=Genbank:WP_012413950.1;Name=WP_012413950.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012413950.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3733881 3738817 . + . ID=id248;gbkey=repeat_region NC_010634.1 RefSeq gene 3736150 3738798 . - . ID=gene3399;Name=YPTS_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17045;old_locus_tag=YPTS_3380 NC_010634.1 Protein Homology CDS 3736150 3738798 . - 0 ID=cds3301;Parent=gene3399;Dbxref=Genbank:WP_011192991.1;Name=WP_011192991.1;gbkey=CDS;product=ATPase;protein_id=WP_011192991.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3739140 3746008 . + . ID=id249;gbkey=repeat_region NC_010634.1 RefSeq gene 3739216 3739707 . - . ID=gene3400;Name=YPTS_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17050;old_locus_tag=YPTS_3381 NC_010634.1 Protein Homology CDS 3739216 3739707 . - 0 ID=cds3302;Parent=gene3400;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_010634.1 RefSeq gene 3739711 3741447 . - . ID=gene3401;Name=YPTS_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17055;old_locus_tag=YPTS_3382 NC_010634.1 Protein Homology CDS 3739711 3741447 . - 0 ID=cds3303;Parent=gene3401;Dbxref=Genbank:WP_011192992.1;Name=WP_011192992.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192992.1;transl_table=11 NC_010634.1 RefSeq gene 3741447 3742133 . - . ID=gene3402;Name=YPTS_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17060;old_locus_tag=YPTS_3383 NC_010634.1 Protein Homology CDS 3741447 3742133 . - 0 ID=cds3304;Parent=gene3402;Dbxref=Genbank:WP_011192993.1;Name=WP_011192993.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192993.1;transl_table=11 NC_010634.1 RefSeq gene 3742130 3743482 . - . ID=gene3403;Name=YPTS_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17065;old_locus_tag=YPTS_3384 NC_010634.1 Protein Homology CDS 3742130 3743482 . - 0 ID=cds3305;Parent=gene3403;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11 NC_010634.1 RefSeq gene 3743494 3745038 . - . ID=gene3404;Name=YPTS_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17070;old_locus_tag=YPTS_3385 NC_010634.1 Protein Homology CDS 3743494 3745038 . - 0 ID=cds3306;Parent=gene3404;Dbxref=Genbank:WP_032484263.1;Name=WP_032484263.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_032484263.1;transl_table=11 NC_010634.1 RefSeq gene 3745081 3745581 . - . ID=gene3405;Name=YPTS_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17075;old_locus_tag=YPTS_3386 NC_010634.1 Protein Homology CDS 3745081 3745581 . - 0 ID=cds3307;Parent=gene3405;Dbxref=Genbank:WP_002213014.1;Name=WP_002213014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213014.1;transl_table=11 NC_010634.1 RefSeq gene 3746791 3746946 . - . ID=gene3406;Name=YPTS_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17080;old_locus_tag=YPTS_3387 NC_010634.1 Protein Homology CDS 3746791 3746946 . - 0 ID=cds3308;Parent=gene3406;Dbxref=Genbank:WP_012303633.1;Name=WP_012303633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303633.1;transl_table=11 NC_010634.1 RefSeq gene 3746989 3747360 . - . ID=gene3407;Name=YPTS_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17085;old_locus_tag=YPTS_3388 NC_010634.1 Protein Homology CDS 3746989 3747360 . - 0 ID=cds3309;Parent=gene3407;Dbxref=Genbank:WP_012413951.1;Name=WP_012413951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413951.1;transl_table=11 NC_010634.1 RefSeq gene 3747517 3747780 . - . ID=gene3408;Name=YPTS_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17090;old_locus_tag=YPTS_3389 NC_010634.1 Protein Homology CDS 3747517 3747780 . - 0 ID=cds3310;Parent=gene3408;Dbxref=Genbank:WP_012413952.1;Name=WP_012413952.1;gbkey=CDS;product=transposase;protein_id=WP_012413952.1;transl_table=11 NC_010634.1 RefSeq gene 3747848 3748243 . - . ID=gene3409;Name=YPTS_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17095;old_locus_tag=YPTS_3390 NC_010634.1 Protein Homology CDS 3747848 3748243 . - 0 ID=cds3311;Parent=gene3409;Dbxref=Genbank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11 NC_010634.1 RefSeq gene 3748694 3749344 . - . ID=gene3410;Name=YPTS_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17100;old_locus_tag=YPTS_3391 NC_010634.1 Protein Homology CDS 3748694 3749344 . - 0 ID=cds3312;Parent=gene3410;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11 NC_010634.1 RefSeq gene 3750515 3751165 . + . ID=gene3411;Name=YPTS_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17105;old_locus_tag=YPTS_3394 NC_010634.1 Protein Homology CDS 3750515 3751165 . + 0 ID=cds3313;Parent=gene3411;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NC_010634.1 RefSeq gene 3751146 3751889 . - . ID=gene3412;Name=YPTS_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17110;old_locus_tag=YPTS_3395 NC_010634.1 Protein Homology CDS 3751146 3751889 . - 0 ID=cds3314;Parent=gene3412;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NC_010634.1 RefSeq gene 3752451 3753809 . + . ID=gene3413;Name=YPTS_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17115;old_locus_tag=YPTS_3396 NC_010634.1 Protein Homology CDS 3752451 3753809 . + 0 ID=cds3315;Parent=gene3413;Dbxref=Genbank:WP_012413954.1;Name=WP_012413954.1;gbkey=CDS;product=peptidase;protein_id=WP_012413954.1;transl_table=11 NC_010634.1 RefSeq gene 3754197 3755030 . + . ID=gene3414;Name=YPTS_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17120;old_locus_tag=YPTS_3397 NC_010634.1 Protein Homology CDS 3754197 3755030 . + 0 ID=cds3316;Parent=gene3414;Dbxref=Genbank:WP_011192997.1;Name=WP_011192997.1;gbkey=CDS;product=dioxygenase;protein_id=WP_011192997.1;transl_table=11 NC_010634.1 RefSeq gene 3755321 3756544 . - . ID=gene3415;Name=YPTS_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17125;old_locus_tag=YPTS_3398 NC_010634.1 Protein Homology CDS 3755321 3756544 . - 0 ID=cds3317;Parent=gene3415;Dbxref=Genbank:WP_012413955.1;Name=WP_012413955.1;gbkey=CDS;product=MFS transporter;protein_id=WP_012413955.1;transl_table=11 NC_010634.1 RefSeq gene 3756684 3758456 . + . ID=gene3416;Name=YPTS_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17130;old_locus_tag=YPTS_3399 NC_010634.1 Protein Homology CDS 3756684 3758456 . + 0 ID=cds3318;Parent=gene3416;Dbxref=Genbank:WP_011192999.1;Name=WP_011192999.1;gbkey=CDS;product=aerobactin synthase IucA;protein_id=WP_011192999.1;transl_table=11 NC_010634.1 RefSeq gene 3758440 3759390 . + . ID=gene3417;Name=YPTS_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17135;old_locus_tag=YPTS_3400 NC_010634.1 Protein Homology CDS 3758440 3759390 . + 0 ID=cds3319;Parent=gene3417;Dbxref=Genbank:WP_011193000.1;Name=WP_011193000.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_011193000.1;transl_table=11 NC_010634.1 RefSeq gene 3759387 3761135 . + . ID=gene3418;Name=YPTS_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17140;old_locus_tag=YPTS_3401 NC_010634.1 Protein Homology CDS 3759387 3761135 . + 0 ID=cds3320;Parent=gene3418;Dbxref=Genbank:WP_012413956.1;Name=WP_012413956.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_012413956.1;transl_table=11 NC_010634.1 RefSeq gene 3761132 3762460 . + . ID=gene3419;Name=YPTS_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17145;old_locus_tag=YPTS_3402 NC_010634.1 Protein Homology CDS 3761132 3762460 . + 0 ID=cds3321;Parent=gene3419;Dbxref=Genbank:WP_011193002.1;Name=WP_011193002.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_011193002.1;transl_table=11 NC_010634.1 RefSeq gene 3762532 3764712 . + . ID=gene3420;Name=YPTS_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17150;old_locus_tag=YPTS_3403 NC_010634.1 Protein Homology CDS 3762532 3764712 . + 0 ID=cds3322;Parent=gene3420;Dbxref=Genbank:WP_011193003.1;Name=WP_011193003.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_011193003.1;transl_table=11 NC_010634.1 RefSeq gene 3765003 3766427 . - . ID=gene3421;Name=YPTS_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17155;old_locus_tag=YPTS_3404 NC_010634.1 Protein Homology CDS 3765003 3766427 . - 0 ID=cds3323;Parent=gene3421;Dbxref=Genbank:WP_002211645.1;Name=WP_002211645.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_002211645.1;transl_table=11 NC_010634.1 RefSeq gene 3766589 3767662 . - . ID=gene3422;Name=YPTS_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17160;old_locus_tag=YPTS_3405 NC_010634.1 Protein Homology CDS 3766589 3767662 . - 0 ID=cds3324;Parent=gene3422;Dbxref=Genbank:WP_012413957.1;Name=WP_012413957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413957.1;transl_table=11 NC_010634.1 RefSeq gene 3767956 3768975 . + . ID=gene3423;Name=YPTS_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17165;old_locus_tag=YPTS_3406 NC_010634.1 Protein Homology CDS 3767956 3768975 . + 0 ID=cds3325;Parent=gene3423;Dbxref=Genbank:WP_012303625.1;Name=WP_012303625.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_012303625.1;transl_table=11 NC_010634.1 RefSeq gene 3769257 3770636 . + . ID=gene3424;Name=YPTS_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17170;old_locus_tag=YPTS_3407 NC_010634.1 Protein Homology CDS 3769257 3770636 . + 0 ID=cds3326;Parent=gene3424;Dbxref=Genbank:WP_011193006.1;Name=WP_011193006.1;gbkey=CDS;product=sodium/sulfate symporter;protein_id=WP_011193006.1;transl_table=11 NC_010634.1 RefSeq gene 3770816 3771229 . - . ID=gene3425;Name=YPTS_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17175;old_locus_tag=YPTS_3409 NC_010634.1 Protein Homology CDS 3770816 3771229 . - 0 ID=cds3327;Parent=gene3425;Dbxref=Genbank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211404.1;transl_table=11 NC_010634.1 RefSeq gene 3771773 3772015 . - . ID=gene3426;Name=YPTS_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17180 NC_010634.1 Protein Homology CDS 3771773 3772015 . - 0 ID=cds3328;Parent=gene3426;Dbxref=Genbank:WP_032466586.1;Name=WP_032466586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466586.1;transl_table=11 NC_010634.1 RefSeq gene 3772434 3772958 . - . ID=gene3427;Name=YPTS_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17185;old_locus_tag=YPTS_3411 NC_010634.1 Protein Homology CDS 3772434 3772958 . - 0 ID=cds3329;Parent=gene3427;Dbxref=Genbank:WP_011193008.1;Name=WP_011193008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193008.1;transl_table=11 NC_010634.1 RefSeq gene 3773183 3773521 . - . ID=gene3428;Name=YPTS_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17190;old_locus_tag=YPTS_3412 NC_010634.1 Protein Homology CDS 3773183 3773521 . - 0 ID=cds3330;Parent=gene3428;Dbxref=Genbank:WP_011193009.1;Name=WP_011193009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193009.1;transl_table=11 NC_010634.1 RefSeq gene 3773651 3774166 . - . ID=gene3429;Name=YPTS_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17195;old_locus_tag=YPTS_3413 NC_010634.1 Protein Homology CDS 3773651 3774166 . - 0 ID=cds3331;Parent=gene3429;Dbxref=Genbank:WP_012104567.1;Name=WP_012104567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104567.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3774481 3777438 . + . ID=id250;gbkey=repeat_region NC_010634.1 RefSeq gene 3774481 3775497 . - . ID=gene3430;Name=YPTS_RS17200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS17200;partial=true;pseudo=true;start_range=.,3774481 NC_010634.1 Protein Homology CDS 3774481 3775497 . - 0 ID=cds3332;Parent=gene3430;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,3774481;transl_table=11 NC_010634.1 RefSeq gene 3775735 3777435 . - . ID=gene3431;Name=YPTS_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17205 NC_010634.1 Protein Homology CDS 3775735 3777435 . - 0 ID=cds3333;Parent=gene3431;Dbxref=Genbank:WP_041175473.1;Name=WP_041175473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175473.1;transl_table=11 NC_010634.1 RefSeq gene 3777491 3778150 . - . ID=gene3432;Name=YPTS_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17210;old_locus_tag=YPTS_3416 NC_010634.1 Protein Homology CDS 3777491 3778150 . - 0 ID=cds3334;Parent=gene3432;Dbxref=Genbank:WP_011193011.1;Name=WP_011193011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193011.1;transl_table=11 NC_010634.1 RefSeq gene 3778539 3778889 . - . ID=gene3433;Name=YPTS_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17215;old_locus_tag=YPTS_3417 NC_010634.1 Protein Homology CDS 3778539 3778889 . - 0 ID=cds3335;Parent=gene3433;Dbxref=Genbank:WP_012413959.1;Name=WP_012413959.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413959.1;transl_table=11 NC_010634.1 RefSeq gene 3779308 3779799 . - . ID=gene3434;Name=YPTS_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17220;old_locus_tag=YPTS_3418 NC_010634.1 Protein Homology CDS 3779308 3779799 . - 0 ID=cds3336;Parent=gene3434;Dbxref=Genbank:WP_011193013.1;Name=WP_011193013.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193013.1;transl_table=11 NC_010634.1 RefSeq gene 3779765 3784249 . - . ID=gene3435;Name=YPTS_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17225;old_locus_tag=YPTS_3419 NC_010634.1 Protein Homology CDS 3779765 3784249 . - 0 ID=cds3337;Parent=gene3435;Dbxref=Genbank:WP_012413961.1;Name=WP_012413961.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012413961.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3780134 3783091 . + . ID=id251;gbkey=repeat_region NC_010634.1 RefSeq gene 3784263 3785582 . - . ID=gene3436;Name=YPTS_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17230;old_locus_tag=YPTS_3420 NC_010634.1 Protein Homology CDS 3784263 3785582 . - 0 ID=cds3338;Parent=gene3436;Dbxref=Genbank:WP_012413962.1;Name=WP_012413962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413962.1;transl_table=11 NC_010634.1 RefSeq gene 3785608 3787833 . - . ID=gene3437;Name=YPTS_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17235;old_locus_tag=YPTS_3421 NC_010634.1 Protein Homology CDS 3785608 3787833 . - 0 ID=cds3339;Parent=gene3437;Dbxref=Genbank:WP_011193016.1;Name=WP_011193016.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_011193016.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3788368 3790544 . + . ID=id252;gbkey=repeat_region NC_010634.1 RefSeq gene 3788418 3792203 . - . ID=gene3438;Name=YPTS_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17240;old_locus_tag=YPTS_3422 NC_010634.1 Protein Homology CDS 3788418 3792203 . - 0 ID=cds3340;Parent=gene3438;Dbxref=Genbank:WP_012413963.1;Name=WP_012413963.1;gbkey=CDS;product=autotransporter;protein_id=WP_012413963.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3792809 3794985 . + . ID=id253;gbkey=repeat_region NC_010634.1 RefSeq gene 3792859 3796638 . - . ID=gene3439;Name=YPTS_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17245;old_locus_tag=YPTS_3423 NC_010634.1 Protein Homology CDS 3792859 3796638 . - 0 ID=cds3341;Parent=gene3439;Dbxref=Genbank:WP_012413964.1;Name=WP_012413964.1;gbkey=CDS;product=autotransporter;protein_id=WP_012413964.1;transl_table=11 NC_010634.1 RefSeq gene 3797672 3799015 . - . ID=gene3440;Name=YPTS_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17250;old_locus_tag=YPTS_3424 NC_010634.1 Protein Homology CDS 3797672 3799015 . - 0 ID=cds3342;Parent=gene3440;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11 NC_010634.1 RefSeq gene 3800554 3800952 . + . ID=gene3441;Name=YPTS_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17255;old_locus_tag=YPTS_3426 NC_010634.1 Protein Homology CDS 3800554 3800952 . + 0 ID=cds3343;Parent=gene3441;Dbxref=Genbank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11 NC_010634.1 RefSeq gene 3801388 3802263 . + . ID=gene3442;Name=YPTS_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17260;old_locus_tag=YPTS_3427 NC_010634.1 Protein Homology CDS 3801388 3802263 . + 0 ID=cds3344;Parent=gene3442;Dbxref=Genbank:WP_011193019.1;Name=WP_011193019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193019.1;transl_table=11 NC_010634.1 RefSeq gene 3802626 3804383 . - . ID=gene3443;Name=YPTS_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17265;old_locus_tag=YPTS_3428 NC_010634.1 Protein Homology CDS 3802626 3804383 . - 0 ID=cds3345;Parent=gene3443;Dbxref=Genbank:WP_011193020.1;Name=WP_011193020.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_011193020.1;transl_table=11 NC_010634.1 RefSeq gene 3804376 3806148 . - . ID=gene3444;Name=YPTS_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17270;old_locus_tag=YPTS_3429 NC_010634.1 Protein Homology CDS 3804376 3806148 . - 0 ID=cds3346;Parent=gene3444;Dbxref=Genbank:WP_012104559.1;Name=WP_012104559.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_012104559.1;transl_table=11 NC_010634.1 RefSeq gene 3806148 3807416 . - . ID=gene3445;Name=YPTS_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17275;old_locus_tag=YPTS_3430 NC_010634.1 Protein Homology CDS 3806148 3807416 . - 0 ID=cds3347;Parent=gene3445;Dbxref=Genbank:WP_011193022.1;Name=WP_011193022.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011193022.1;transl_table=11 NC_010634.1 RefSeq gene 3807406 3808179 . - . ID=gene3446;Name=YPTS_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17280;old_locus_tag=YPTS_3431 NC_010634.1 Protein Homology CDS 3807406 3808179 . - 0 ID=cds3348;Parent=gene3446;Dbxref=Genbank:WP_011193023.1;Name=WP_011193023.1;gbkey=CDS;product=thioesterase;protein_id=WP_011193023.1;transl_table=11 NC_010634.1 RefSeq gene 3808172 3809299 . - . ID=gene3447;Name=YPTS_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17285;old_locus_tag=YPTS_3432 NC_010634.1 Protein Homology CDS 3808172 3809299 . - 0 ID=cds3349;Parent=gene3447;Dbxref=Genbank:WP_011193024.1;Name=WP_011193024.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_011193024.1;transl_table=11 NC_010634.1 RefSeq gene 3809296 3810366 . - . ID=gene3448;Name=YPTS_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17290;old_locus_tag=YPTS_3433 NC_010634.1 Protein Homology CDS 3809296 3810366 . - 0 ID=cds3350;Parent=gene3448;Dbxref=Genbank:WP_011193025.1;Name=WP_011193025.1;gbkey=CDS;product=saccharopine dehydrogenase;protein_id=WP_011193025.1;transl_table=11 NC_010634.1 RefSeq gene 3810363 3816083 . - . ID=gene3449;Name=YPTS_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17295;old_locus_tag=YPTS_3434 NC_010634.1 Protein Homology CDS 3810363 3816083 . - 0 ID=cds3351;Parent=gene3449;Dbxref=Genbank:WP_012413966.1;Name=WP_012413966.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_012413966.1;transl_table=11 NC_010634.1 RefSeq gene 3816096 3817784 . - . ID=gene3450;Name=YPTS_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17300 NC_010634.1 Protein Homology CDS 3816096 3817784 . - 0 ID=cds3352;Parent=gene3450;Dbxref=Genbank:WP_041175474.1;Name=WP_041175474.1;gbkey=CDS;product=siderophore biosysnthesis protein;protein_id=WP_041175474.1;transl_table=11 NC_010634.1 RefSeq gene 3817792 3824249 . - . ID=gene3451;Name=YPTS_RS17305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS17305;pseudo=true NC_010634.1 Protein Homology CDS 3817792 3824249 . - 0 ID=cds3353;Parent=gene3451;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide synthetase;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 3827859 3829931 . - . ID=gene3452;Name=YPTS_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17315;old_locus_tag=YPTS_3436 NC_010634.1 Protein Homology CDS 3827859 3829931 . - 0 ID=cds3354;Parent=gene3452;Dbxref=Genbank:WP_011193028.1;Name=WP_011193028.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_011193028.1;transl_table=11 NC_010634.1 RefSeq gene 3830315 3831547 . - . ID=gene3453;Name=YPTS_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17320;old_locus_tag=YPTS_3437 NC_010634.1 Protein Homology CDS 3830315 3831547 . - 0 ID=cds3355;Parent=gene3453;Dbxref=Genbank:WP_011193029.1;Name=WP_011193029.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_011193029.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3831580 3831982 . + . ID=id254;gbkey=repeat_region NC_010634.1 RefSeq gene 3831986 3833542 . - . ID=gene3454;Name=YPTS_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17325;old_locus_tag=YPTS_3438 NC_010634.1 Protein Homology CDS 3831986 3833542 . - 0 ID=cds3356;Parent=gene3454;Dbxref=Genbank:WP_012413968.1;Name=WP_012413968.1;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=WP_012413968.1;transl_table=11 NC_010634.1 RefSeq gene 3834258 3836093 . + . ID=gene3455;Name=YPTS_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17330;old_locus_tag=YPTS_3440 NC_010634.1 Protein Homology CDS 3834258 3836093 . + 0 ID=cds3357;Parent=gene3455;Dbxref=Genbank:WP_041175573.1;Name=WP_041175573.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175573.1;transl_table=11 NC_010634.1 RefSeq gene 3836199 3847331 . - . ID=gene3456;Name=YPTS_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17335;old_locus_tag=YPTS_3441 NC_010634.1 Protein Homology CDS 3836199 3847331 . - 0 ID=cds3358;Parent=gene3456;Dbxref=Genbank:WP_012413971.1;Name=WP_012413971.1;gbkey=CDS;product=autotransporter;protein_id=WP_012413971.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3839248 3839741 . + . ID=id255;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3840127 3840577 . + . ID=id256;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3841087 3841580 . + . ID=id257;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3842946 3843401 . + . ID=id258;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3843769 3844219 . + . ID=id259;gbkey=repeat_region NC_010634.1 RefSeq gene 3848169 3848756 . - . ID=gene3457;Name=YPTS_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17340;old_locus_tag=YPTS_3442 NC_010634.1 Protein Homology CDS 3848169 3848756 . - 0 ID=cds3359;Parent=gene3457;Dbxref=Genbank:WP_011193034.1;Name=WP_011193034.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193034.1;transl_table=11 NC_010634.1 RefSeq gene 3849032 3850522 . + . ID=gene3458;Name=YPTS_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17345;old_locus_tag=YPTS_3443 NC_010634.1 Protein Homology CDS 3849032 3850522 . + 0 ID=cds3360;Parent=gene3458;Dbxref=Genbank:WP_011193035.1;Name=WP_011193035.1;gbkey=CDS;product=enterotoxin;protein_id=WP_011193035.1;transl_table=11 NC_010634.1 RefSeq gene 3850641 3853760 . - . ID=gene3459;Name=YPTS_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17350;old_locus_tag=YPTS_3444 NC_010634.1 Protein Homology CDS 3850641 3853760 . - 0 ID=cds3361;Parent=gene3459;Dbxref=Genbank:WP_011193036.1;Name=WP_011193036.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_011193036.1;transl_table=11 NC_010634.1 RefSeq gene 3853773 3855065 . - . ID=gene3460;Name=YPTS_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17355;old_locus_tag=YPTS_3445 NC_010634.1 Protein Homology CDS 3853773 3855065 . - 0 ID=cds3362;Parent=gene3460;Dbxref=Genbank:WP_012413972.1;Name=WP_012413972.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_012413972.1;transl_table=11 NC_010634.1 RefSeq gene 3855503 3858070 . + . ID=gene3461;Name=YPTS_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17360;old_locus_tag=YPTS_3446 NC_010634.1 Protein Homology CDS 3855503 3858070 . + 0 ID=cds3363;Parent=gene3461;Dbxref=Genbank:WP_011193038.1;Name=WP_011193038.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_011193038.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3858219 3859660 . + . ID=id260;gbkey=repeat_region NC_010634.1 RefSeq gene 3858275 3858790 . + . ID=gene3462;Name=YPTS_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17365;old_locus_tag=YPTS_3447 NC_010634.1 Protein Homology CDS 3858275 3858790 . + 0 ID=cds3364;Parent=gene3462;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_010634.1 RefSeq gene 3858844 3859629 . + . ID=gene3463;Name=YPTS_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17370;old_locus_tag=YPTS_3448 NC_010634.1 Protein Homology CDS 3858844 3859629 . + 0 ID=cds3365;Parent=gene3463;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_010634.1 RefSeq gene 3860140 3860442 . + . ID=gene3464;Name=YPTS_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17375 NC_010634.1 Protein Homology CDS 3860140 3860442 . + 0 ID=cds3366;Parent=gene3464;Dbxref=Genbank:WP_002230614.1;Name=WP_002230614.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230614.1;transl_table=11 NC_010634.1 RefSeq gene 3860691 3861158 . + . ID=gene3465;Name=YPTS_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17380;old_locus_tag=YPTS_3449 NC_010634.1 Protein Homology CDS 3860691 3861158 . + 0 ID=cds3367;Parent=gene3465;Dbxref=Genbank:WP_002226659.1;Name=WP_002226659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002226659.1;transl_table=11 NC_010634.1 RefSeq gene 3861311 3861568 . - . ID=gene3466;Name=YPTS_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17385 NC_010634.1 Protein Homology CDS 3861311 3861568 . - 0 ID=cds3368;Parent=gene3466;Dbxref=Genbank:WP_002353780.1;Name=WP_002353780.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353780.1;transl_table=11 NC_010634.1 RefSeq gene 3861666 3862121 . - . ID=gene3467;Name=YPTS_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17390;old_locus_tag=YPTS_3451 NC_010634.1 Protein Homology CDS 3861666 3862121 . - 0 ID=cds3369;Parent=gene3467;Dbxref=Genbank:WP_011193040.1;Name=WP_011193040.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193040.1;transl_table=11 NC_010634.1 RefSeq gene 3862118 3862714 . - . ID=gene3468;Name=YPTS_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17395;old_locus_tag=YPTS_3452 NC_010634.1 Protein Homology CDS 3862118 3862714 . - 0 ID=cds3370;Parent=gene3468;Dbxref=Genbank:WP_002211410.1;Name=WP_002211410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211410.1;transl_table=11 NC_010634.1 RefSeq gene 3862917 3863105 . - . ID=gene3469;Name=YPTS_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17400 NC_010634.1 Protein Homology CDS 3862917 3863105 . - 0 ID=cds3371;Parent=gene3469;Dbxref=Genbank:WP_011193042.1;Name=WP_011193042.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193042.1;transl_table=11 NC_010634.1 RefSeq gene 3863174 3864085 . - . ID=gene3470;Name=YPTS_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17405;old_locus_tag=YPTS_3453 NC_010634.1 Protein Homology CDS 3863174 3864085 . - 0 ID=cds3372;Parent=gene3470;Dbxref=Genbank:WP_012413974.1;Name=WP_012413974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413974.1;transl_table=11 NC_010634.1 RefSeq gene 3864085 3864951 . - . ID=gene3471;Name=YPTS_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17410;old_locus_tag=YPTS_3454 NC_010634.1 Protein Homology CDS 3864085 3864951 . - 0 ID=cds3373;Parent=gene3471;Dbxref=Genbank:WP_011193044.1;Name=WP_011193044.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_011193044.1;transl_table=11 NC_010634.1 RefSeq gene 3864967 3865662 . - . ID=gene3472;Name=YPTS_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17415;old_locus_tag=YPTS_3455 NC_010634.1 Protein Homology CDS 3864967 3865662 . - 0 ID=cds3374;Parent=gene3472;Dbxref=Genbank:WP_012413975.1;Name=WP_012413975.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;product=DNA-directed RNA polymerase sigma-70 factor;protein_id=WP_012413975.1;transl_table=11 NC_010634.1 RefSeq gene 3865668 3866138 . - . ID=gene3473;Name=YPTS_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17420;old_locus_tag=YPTS_3456 NC_010634.1 Protein Homology CDS 3865668 3866138 . - 0 ID=cds3375;Parent=gene3473;Dbxref=Genbank:WP_011193046.1;Name=WP_011193046.1;gbkey=CDS;product=flagellar biogenesis protein;protein_id=WP_011193046.1;transl_table=11 NC_010634.1 RefSeq gene 3866164 3867261 . - . ID=gene3474;Name=YPTS_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17425;old_locus_tag=YPTS_3457 NC_010634.1 Protein Homology CDS 3866164 3867261 . - 0 ID=cds3376;Parent=gene3474;Dbxref=Genbank:WP_011193047.1;Name=WP_011193047.1;gbkey=CDS;product=flagellar hook-length control protein;protein_id=WP_011193047.1;transl_table=11 NC_010634.1 RefSeq gene 3867263 3867589 . - . ID=gene3475;Name=YPTS_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17430;old_locus_tag=YPTS_3458 NC_010634.1 Protein Homology CDS 3867263 3867589 . - 0 ID=cds3377;Parent=gene3475;Dbxref=Genbank:WP_011193048.1;Name=WP_011193048.1;gbkey=CDS;product=flagellar protein lafD;protein_id=WP_011193048.1;transl_table=11 NC_010634.1 RefSeq gene 3867591 3867974 . - . ID=gene3476;Name=YPTS_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17435;old_locus_tag=YPTS_3459 NC_010634.1 Protein Homology CDS 3867591 3867974 . - 0 ID=cds3378;Parent=gene3476;Dbxref=Genbank:WP_011193049.1;Name=WP_011193049.1;gbkey=CDS;product=flagellar export chaperone FliS;protein_id=WP_011193049.1;transl_table=11 NC_010634.1 RefSeq gene 3867984 3869270 . - . ID=gene3477;Name=YPTS_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17440;old_locus_tag=YPTS_3460 NC_010634.1 Protein Homology CDS 3867984 3869270 . - 0 ID=cds3379;Parent=gene3477;Dbxref=Genbank:WP_011193050.1;Name=WP_011193050.1;gbkey=CDS;product=flagellar hook protein;protein_id=WP_011193050.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3869487 3869868 . + . ID=id261;gbkey=repeat_region NC_010634.1 RefSeq gene 3869490 3870692 . - . ID=gene3478;Name=YPTS_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17445;old_locus_tag=YPTS_3461 NC_010634.1 Protein Homology CDS 3869490 3870692 . - 0 ID=cds3380;Parent=gene3478;Dbxref=Genbank:WP_011193051.1;Name=WP_011193051.1;gbkey=CDS;product=flagellin;protein_id=WP_011193051.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3870053 3870777 . + . ID=id262;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 3870972 3871353 . + . ID=id263;gbkey=repeat_region NC_010634.1 RefSeq gene 3870975 3872162 . - . ID=gene3479;Name=YPTS_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17450;old_locus_tag=YPTS_3462 NC_010634.1 Protein Homology CDS 3870975 3872162 . - 0 ID=cds3381;Parent=gene3479;Dbxref=Genbank:WP_012413976.1;Name=WP_012413976.1;gbkey=CDS;product=flagellin;protein_id=WP_012413976.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3871523 3872247 . + . ID=id264;gbkey=repeat_region NC_010634.1 RefSeq gene 3872785 3873831 . + . ID=gene3480;Name=YPTS_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17455;old_locus_tag=YPTS_3463 NC_010634.1 Protein Homology CDS 3872785 3873831 . + 0 ID=cds3382;Parent=gene3480;Dbxref=Genbank:WP_011193052.1;Name=WP_011193052.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193052.1;transl_table=11 NC_010634.1 RefSeq gene 3873812 3874258 . + . ID=gene3481;Name=YPTS_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17460;old_locus_tag=YPTS_3464 NC_010634.1 Protein Homology CDS 3873812 3874258 . + 0 ID=cds3383;Parent=gene3481;Dbxref=Genbank:WP_011193053.1;Name=WP_011193053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193053.1;transl_table=11 NC_010634.1 RefSeq gene 3874405 3875418 . - . ID=gene3482;Name=YPTS_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17465;old_locus_tag=YPTS_3465 NC_010634.1 Protein Homology CDS 3874405 3875418 . - 0 ID=cds3384;Parent=gene3482;Dbxref=Genbank:WP_011193054.1;Name=WP_011193054.1;gbkey=CDS;product=flagellar hook associated protein lafW;protein_id=WP_011193054.1;transl_table=11 NC_010634.1 RefSeq gene 3875430 3876353 . - . ID=gene3483;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPTS_RS17470;old_locus_tag=YPTS_3466 NC_010634.1 Protein Homology CDS 3875430 3876353 . - 0 ID=cds3385;Parent=gene3483;Dbxref=Genbank:WP_011193055.1;Name=WP_011193055.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_011193055.1;transl_table=11 NC_010634.1 RefSeq gene 3876382 3877743 . - . ID=gene3484;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPTS_RS17475;old_locus_tag=YPTS_3467 NC_010634.1 Protein Homology CDS 3876382 3877743 . - 0 ID=cds3386;Parent=gene3484;Dbxref=Genbank:WP_011193056.1;Name=WP_011193056.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_011193056.1;transl_table=11 NC_010634.1 RefSeq gene 3877856 3878149 . - . ID=gene3485;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPTS_RS17480;old_locus_tag=YPTS_3468 NC_010634.1 Protein Homology CDS 3877856 3878149 . - 0 ID=cds3387;Parent=gene3485;Dbxref=Genbank:WP_011193057.1;Name=WP_011193057.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_011193057.1;transl_table=11 NC_010634.1 RefSeq gene 3878159 3879217 . - . ID=gene3486;Name=YPTS_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17485;old_locus_tag=YPTS_3469 NC_010634.1 Protein Homology CDS 3878159 3879217 . - 0 ID=cds3388;Parent=gene3486;Dbxref=Genbank:WP_042592914.1;Name=WP_042592914.1;gbkey=CDS;product=flagellar P-ring protein FlgI;protein_id=WP_042592914.1;transl_table=11 NC_010634.1 RefSeq gene 3879348 3880013 . - . ID=gene3487;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPTS_RS17490;old_locus_tag=YPTS_3470 NC_010634.1 Protein Homology CDS 3879348 3880013 . - 0 ID=cds3389;Parent=gene3487;Dbxref=Genbank:WP_011193059.1;Name=WP_011193059.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein;protein_id=WP_011193059.1;transl_table=11 NC_010634.1 RefSeq gene 3880048 3880833 . - . ID=gene3488;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPTS_RS17495;old_locus_tag=YPTS_3471 NC_010634.1 Protein Homology CDS 3880048 3880833 . - 0 ID=cds3390;Parent=gene3488;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NC_010634.1 RefSeq gene 3880901 3881632 . - . ID=gene3489;Name=YPTS_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17500;old_locus_tag=YPTS_3472 NC_010634.1 Protein Homology CDS 3880901 3881632 . - 0 ID=cds3391;Parent=gene3489;Dbxref=Genbank:WP_011193060.1;Name=WP_011193060.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_011193060.1;transl_table=11 NC_010634.1 RefSeq gene 3881632 3882876 . - . ID=gene3490;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPTS_RS17505;old_locus_tag=YPTS_3473 NC_010634.1 Protein Homology CDS 3881632 3882876 . - 0 ID=cds3392;Parent=gene3490;Dbxref=Genbank:WP_011193061.1;Name=WP_011193061.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_011193061.1;transl_table=11 NC_010634.1 RefSeq gene 3882931 3883587 . - . ID=gene3491;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPTS_RS17510;old_locus_tag=YPTS_3474 NC_010634.1 Protein Homology CDS 3882931 3883587 . - 0 ID=cds3393;Parent=gene3491;Dbxref=Genbank:WP_011193062.1;Name=WP_011193062.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_011193062.1;transl_table=11 NC_010634.1 RefSeq gene 3883590 3884015 . - . ID=gene3492;Name=YPTS_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17515;old_locus_tag=YPTS_3475 NC_010634.1 Protein Homology CDS 3883590 3884015 . - 0 ID=cds3394;Parent=gene3492;Dbxref=Genbank:WP_002211434.1;Name=WP_002211434.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11 NC_010634.1 RefSeq gene 3884018 3884464 . - . ID=gene3493;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPTS_RS17520;old_locus_tag=YPTS_3476 NC_010634.1 Protein Homology CDS 3884018 3884464 . - 0 ID=cds3395;Parent=gene3493;Dbxref=Genbank:WP_002211435.1;Name=WP_002211435.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211435.1;transl_table=11 NC_010634.1 RefSeq gene 3884522 3885370 . + . ID=gene3494;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPTS_RS17525;old_locus_tag=YPTS_3477 NC_010634.1 Protein Homology CDS 3884522 3885370 . + 0 ID=cds3396;Parent=gene3494;Dbxref=Genbank:WP_041175517.1;Name=WP_041175517.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_041175517.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3885407 3885529 . + . ID=id265;gbkey=repeat_region NC_010634.1 RefSeq gene 3885675 3885941 . + . ID=gene3495;Name=YPTS_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17530;old_locus_tag=YPTS_3478 NC_010634.1 Protein Homology CDS 3885675 3885941 . + 0 ID=cds3397;Parent=gene3495;Dbxref=Genbank:WP_012413978.1;Name=WP_012413978.1;gbkey=CDS;product=flagellar regulatory protein;protein_id=WP_012413978.1;transl_table=11 NC_010634.1 RefSeq gene 3885948 3886373 . + . ID=gene3496;Name=YPTS_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17535;old_locus_tag=YPTS_3479 NC_010634.1 Protein Homology CDS 3885948 3886373 . + 0 ID=cds3398;Parent=gene3496;Dbxref=Genbank:WP_011193063.1;Name=WP_011193063.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193063.1;transl_table=11 NC_010634.1 RefSeq gene 3886712 3887149 . - . ID=gene3497;Name=YPTS_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17540;old_locus_tag=YPTS_3480 NC_010634.1 Protein Homology CDS 3886712 3887149 . - 0 ID=cds3399;Parent=gene3497;Dbxref=Genbank:WP_012413979.1;Name=WP_012413979.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_012413979.1;transl_table=11 NC_010634.1 RefSeq gene 3887153 3888493 . - . ID=gene3498;Name=YPTS_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17545;old_locus_tag=YPTS_3481 NC_010634.1 Protein Homology CDS 3887153 3888493 . - 0 ID=cds3400;Parent=gene3498;Dbxref=Genbank:WP_011193065.1;Name=WP_011193065.1;gbkey=CDS;product=ATP synthase;protein_id=WP_011193065.1;transl_table=11 NC_010634.1 RefSeq gene 3888486 3889202 . - . ID=gene3499;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPTS_RS17550;old_locus_tag=YPTS_3482 NC_010634.1 Protein Homology CDS 3888486 3889202 . - 0 ID=cds3401;Parent=gene3499;Dbxref=Genbank:WP_011193066.1;Name=WP_011193066.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_011193066.1;transl_table=11 NC_010634.1 RefSeq gene 3889207 3890250 . - . ID=gene3500;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPTS_RS17555;old_locus_tag=YPTS_3483 NC_010634.1 Protein Homology CDS 3889207 3890250 . - 0 ID=cds3402;Parent=gene3500;Dbxref=Genbank:WP_002211442.1;Name=WP_002211442.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11 NC_010634.1 RefSeq gene 3890222 3891862 . - . ID=gene3501;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPTS_RS17560;old_locus_tag=YPTS_3484 NC_010634.1 Protein Homology CDS 3890222 3891862 . - 0 ID=cds3403;Parent=gene3501;Dbxref=Genbank:WP_012413980.1;Name=WP_012413980.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=WP_012413980.1;transl_table=11 NC_010634.1 RefSeq gene 3891872 3892252 . - . ID=gene3502;Name=YPTS_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17565;old_locus_tag=YPTS_3485 NC_010634.1 Protein Homology CDS 3891872 3892252 . - 0 ID=cds3404;Parent=gene3502;Dbxref=Genbank:WP_011193068.1;Name=WP_011193068.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_011193068.1;transl_table=11 NC_010634.1 RefSeq gene 3892269 3893297 . - . ID=gene3503;Name=YPTS_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17570;old_locus_tag=YPTS_3486 NC_010634.1 Protein Homology CDS 3892269 3893297 . - 0 ID=cds3405;Parent=gene3503;Dbxref=Genbank:WP_002211445.1;Name=WP_002211445.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002211445.1;transl_table=11 NC_010634.1 RefSeq gene 3893840 3894739 . + . ID=gene3504;Name=YPTS_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17575;old_locus_tag=YPTS_3487 NC_010634.1 Protein Homology CDS 3893840 3894739 . + 0 ID=cds3406;Parent=gene3504;Dbxref=Genbank:WP_012413981.1;Name=WP_012413981.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_012413981.1;transl_table=11 NC_010634.1 RefSeq gene 3894732 3895145 . + . ID=gene3505;Name=YPTS_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17580;old_locus_tag=YPTS_3488 NC_010634.1 Protein Homology CDS 3894732 3895145 . + 0 ID=cds3407;Parent=gene3505;Dbxref=Genbank:WP_002211447.1;Name=WP_002211447.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11 NC_010634.1 RefSeq gene 3895142 3895912 . + . ID=gene3506;Name=YPTS_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17585;old_locus_tag=YPTS_3489 NC_010634.1 Protein Homology CDS 3895142 3895912 . + 0 ID=cds3408;Parent=gene3506;Dbxref=Genbank:WP_012413982.1;Name=WP_012413982.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_012413982.1;transl_table=11 NC_010634.1 RefSeq gene 3895914 3896186 . + . ID=gene3507;Name=YPTS_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17590;old_locus_tag=YPTS_3490 NC_010634.1 Protein Homology CDS 3895914 3896186 . + 0 ID=cds3409;Parent=gene3507;Dbxref=Genbank:WP_002211449.1;Name=WP_002211449.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11 NC_010634.1 RefSeq gene 3896193 3896966 . + . ID=gene3508;Name=YPTS_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17595;old_locus_tag=YPTS_3491 NC_010634.1 Protein Homology CDS 3896193 3896966 . + 0 ID=cds3410;Parent=gene3508;Dbxref=Genbank:WP_002213766.1;Name=WP_002213766.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_002213766.1;transl_table=11 NC_010634.1 RefSeq gene 3896966 3898099 . + . ID=gene3509;Name=YPTS_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17600;old_locus_tag=YPTS_3492 NC_010634.1 Protein Homology CDS 3896966 3898099 . + 0 ID=cds3411;Parent=gene3509;Dbxref=Genbank:WP_011193071.1;Name=WP_011193071.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_011193071.1;transl_table=11 NC_010634.1 RefSeq gene 3898086 3900182 . + . ID=gene3510;Name=YPTS_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17605;old_locus_tag=YPTS_3493 NC_010634.1 Protein Homology CDS 3898086 3900182 . + 0 ID=cds3412;Parent=gene3510;Dbxref=Genbank:WP_011193072.1;Name=WP_011193072.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_011193072.1;transl_table=11 NC_010634.1 RefSeq gene 3900439 3901008 . + . ID=gene3511;Name=YPTS_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17610;old_locus_tag=YPTS_3495 NC_010634.1 Protein Homology CDS 3900439 3901008 . + 0 ID=cds3413;Parent=gene3511;Dbxref=Genbank:WP_012303571.1;Name=WP_012303571.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303571.1;transl_table=11 NC_010634.1 RefSeq gene 3901100 3902095 . - . ID=gene3512;Name=YPTS_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17615;old_locus_tag=YPTS_3496 NC_010634.1 Protein Homology CDS 3901100 3902095 . - 0 ID=cds3414;Parent=gene3512;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11 NC_010634.1 RefSeq gene 3902950 3904029 . + . ID=gene3513;Name=YPTS_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17620;old_locus_tag=YPTS_3497 NC_010634.1 Protein Homology CDS 3902950 3904029 . + 0 ID=cds3415;Parent=gene3513;Dbxref=Genbank:WP_012413984.1;Name=WP_012413984.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_012413984.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3904059 3904192 . + . ID=id266;gbkey=repeat_region NC_010634.1 RefSeq gene 3904241 3905344 . - . ID=gene3514;Name=YPTS_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17625;old_locus_tag=YPTS_3498 NC_010634.1 Protein Homology CDS 3904241 3905344 . - 0 ID=cds3416;Parent=gene3514;Dbxref=Genbank:WP_012413985.1;Name=WP_012413985.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_012413985.1;transl_table=11 NC_010634.1 RefSeq gene 3905369 3906088 . - . ID=gene3515;Name=YPTS_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17630;old_locus_tag=YPTS_3499 NC_010634.1 Protein Homology CDS 3905369 3906088 . - 0 ID=cds3417;Parent=gene3515;Dbxref=Genbank:WP_012413986.1;Name=WP_012413986.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_012413986.1;transl_table=11 NC_010634.1 RefSeq gene 3906106 3908586 . - . ID=gene3516;Name=YPTS_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17635;old_locus_tag=YPTS_3500 NC_010634.1 Protein Homology CDS 3906106 3908586 . - 0 ID=cds3418;Parent=gene3516;Dbxref=Genbank:WP_012413987.1;Name=WP_012413987.1;gbkey=CDS;product=fimbrial protein SteB;protein_id=WP_012413987.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3908889 3910056 . + . ID=id267;gbkey=repeat_region NC_010634.1 RefSeq gene 3908890 3909420 . - . ID=gene3517;Name=YPTS_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17640;old_locus_tag=YPTS_3501 NC_010634.1 Protein Homology CDS 3908890 3909420 . - 0 ID=cds3419;Parent=gene3517;Dbxref=Genbank:WP_012413988.1;Name=WP_012413988.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_012413988.1;transl_table=11 NC_010634.1 RefSeq gene 3910604 3912019 . + . ID=gene3518;Name=YPTS_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17645;old_locus_tag=YPTS_3503 NC_010634.1 Protein Homology CDS 3910604 3912019 . + 0 ID=cds3420;Parent=gene3518;Dbxref=Genbank:WP_012413990.1;Name=WP_012413990.1;gbkey=CDS;product=chitinase;protein_id=WP_012413990.1;transl_table=11 NC_010634.1 RefSeq gene 3912091 3913503 . + . ID=gene3519;Name=YPTS_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17650;old_locus_tag=YPTS_3504 NC_010634.1 Protein Homology CDS 3912091 3913503 . + 0 ID=cds3421;Parent=gene3519;Dbxref=Genbank:WP_012413991.1;Name=WP_012413991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413991.1;transl_table=11 NC_010634.1 RefSeq gene 3913485 3913772 . + . ID=gene3520;Name=YPTS_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17655 NC_010634.1 GeneMarkS+ CDS 3913485 3913772 . + 0 ID=cds3422;Parent=gene3520;Dbxref=Genbank:WP_032466718.1;Name=WP_032466718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466718.1;transl_table=11 NC_010634.1 RefSeq gene 3913907 3914068 . + . ID=gene3521;Name=YPTS_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17660;old_locus_tag=YPTS_3505 NC_010634.1 Protein Homology CDS 3913907 3914068 . + 0 ID=cds3423;Parent=gene3521;Dbxref=Genbank:WP_032466879.1;Name=WP_032466879.1;gbkey=CDS;product=transposase;protein_id=WP_032466879.1;transl_table=11 NC_010634.1 RefSeq gene 3914990 3915577 . + . ID=gene3522;Name=YPTS_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17665;old_locus_tag=YPTS_3506 NC_010634.1 Protein Homology CDS 3914990 3915577 . + 0 ID=cds3424;Parent=gene3522;Dbxref=Genbank:WP_012413992.1;Name=WP_012413992.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413992.1;transl_table=11 NC_010634.1 RefSeq gene 3915800 3915997 . + . ID=gene3523;Name=YPTS_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17670;old_locus_tag=YPTS_3507 NC_010634.1 Protein Homology CDS 3915800 3915997 . + 0 ID=cds3425;Parent=gene3523;Dbxref=Genbank:WP_012413993.1;Name=WP_012413993.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_012413993.1;transl_table=11 NC_010634.1 RefSeq gene 3916064 3916486 . + . ID=gene3524;Name=YPTS_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17675;old_locus_tag=YPTS_3508 NC_010634.1 Protein Homology CDS 3916064 3916486 . + 0 ID=cds3426;Parent=gene3524;Dbxref=Genbank:WP_012413994.1;Name=WP_012413994.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_012413994.1;transl_table=11 NC_010634.1 RefSeq gene 3916538 3917404 . + . ID=gene3525;Name=YPTS_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17680;old_locus_tag=YPTS_3509 NC_010634.1 Protein Homology CDS 3916538 3917404 . + 0 ID=cds3427;Parent=gene3525;Dbxref=Genbank:WP_012413995.1;Name=WP_012413995.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_012413995.1;transl_table=11 NC_010634.1 RefSeq gene 3917401 3918720 . + . ID=gene3526;Name=YPTS_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17685;old_locus_tag=YPTS_3510 NC_010634.1 Protein Homology CDS 3917401 3918720 . + 0 ID=cds3428;Parent=gene3526;Dbxref=Genbank:WP_011193083.1;Name=WP_011193083.1;gbkey=CDS;product=secretin;protein_id=WP_011193083.1;transl_table=11 NC_010634.1 RefSeq gene 3918717 3919007 . + . ID=gene3527;Name=YPTS_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17690;old_locus_tag=YPTS_3511 NC_010634.1 Protein Homology CDS 3918717 3919007 . + 0 ID=cds3429;Parent=gene3527;Dbxref=Genbank:WP_002213782.1;Name=WP_002213782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213782.1;transl_table=11 NC_010634.1 RefSeq gene 3919018 3920145 . + . ID=gene3528;Name=YPTS_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17695;old_locus_tag=YPTS_3512 NC_010634.1 Protein Homology CDS 3919018 3920145 . + 0 ID=cds3430;Parent=gene3528;Dbxref=Genbank:WP_012413996.1;Name=WP_012413996.1;gbkey=CDS;product=pilus assembly protein CpaE;protein_id=WP_012413996.1;transl_table=11 NC_010634.1 RefSeq gene 3920157 3921443 . + . ID=gene3529;Name=YPTS_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17700;old_locus_tag=YPTS_3513 NC_010634.1 Protein Homology CDS 3920157 3921443 . + 0 ID=cds3431;Parent=gene3529;Dbxref=Genbank:WP_002213785.1;Name=WP_002213785.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002213785.1;transl_table=11 NC_010634.1 RefSeq gene 3921440 3922315 . + . ID=gene3530;Name=YPTS_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17705;old_locus_tag=YPTS_3514 NC_010634.1 Protein Homology CDS 3921440 3922315 . + 0 ID=cds3432;Parent=gene3530;Dbxref=Genbank:WP_002212164.1;Name=WP_002212164.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212164.1;transl_table=11 NC_010634.1 RefSeq gene 3922312 3923145 . + . ID=gene3531;Name=YPTS_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17710;old_locus_tag=YPTS_3515 NC_010634.1 Protein Homology CDS 3922312 3923145 . + 0 ID=cds3433;Parent=gene3531;Dbxref=Genbank:WP_002212165.1;Name=WP_002212165.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212165.1;transl_table=11 NC_010634.1 RefSeq gene 3923129 3923895 . + . ID=gene3532;Name=YPTS_RS17715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS17715;pseudo=true NC_010634.1 Protein Homology CDS 3923129 3923895 . + 0 ID=cds3434;Parent=gene3532;exception=annotated by transcript or proteomic data;gbkey=CDS;product=tight adherance operon protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 3923892 3924365 . + . ID=gene3533;Name=YPTS_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17720;old_locus_tag=YPTS_3518 NC_010634.1 Protein Homology CDS 3923892 3924365 . + 0 ID=cds3435;Parent=gene3533;Dbxref=Genbank:WP_011193088.1;Name=WP_011193088.1;gbkey=CDS;product=pilus biosynthesis protein TadE;protein_id=WP_011193088.1;transl_table=11 NC_010634.1 RefSeq gene 3924349 3924921 . + . ID=gene3534;Name=YPTS_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17725;old_locus_tag=YPTS_3519 NC_010634.1 Protein Homology CDS 3924349 3924921 . + 0 ID=cds3436;Parent=gene3534;Dbxref=Genbank:WP_012413999.1;Name=WP_012413999.1;gbkey=CDS;product=pseudopilin;protein_id=WP_012413999.1;transl_table=11 NC_010634.1 RefSeq gene 3924946 3926502 . + . ID=gene3535;Name=YPTS_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17730;old_locus_tag=YPTS_3520 NC_010634.1 Protein Homology CDS 3924946 3926502 . + 0 ID=cds3437;Parent=gene3535;Dbxref=Genbank:WP_012414000.1;Name=WP_012414000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414000.1;transl_table=11 NC_010634.1 RefSeq gene 3926599 3927030 . - . ID=gene3536;Name=YPTS_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17735;old_locus_tag=YPTS_3522 NC_010634.1 Protein Homology CDS 3926599 3927030 . - 0 ID=cds3438;Parent=gene3536;Dbxref=Genbank:WP_012414002.1;Name=WP_012414002.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_012414002.1;transl_table=11 NC_010634.1 RefSeq gene 3927034 3927747 . - . ID=gene3537;Name=YPTS_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17740 NC_010634.1 Protein Homology CDS 3927034 3927747 . - 0 ID=cds3439;Parent=gene3537;Dbxref=Genbank:WP_012104474.1;Name=WP_012104474.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_012104474.1;transl_table=11 NC_010634.1 RefSeq gene 3928550 3929761 . + . ID=gene3538;Name=YPTS_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17745;old_locus_tag=YPTS_3524 NC_010634.1 Protein Homology CDS 3928550 3929761 . + 0 ID=cds3440;Parent=gene3538;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NC_010634.1 RefSeq gene 3929954 3930616 . + . ID=gene3539;Name=YPTS_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17750;old_locus_tag=YPTS_3525 NC_010634.1 Protein Homology CDS 3929954 3930616 . + 0 ID=cds3441;Parent=gene3539;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11 NC_010634.1 RefSeq gene 3930708 3931601 . - . ID=gene3540;Name=YPTS_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17755;old_locus_tag=YPTS_3526 NC_010634.1 Protein Homology CDS 3930708 3931601 . - 0 ID=cds3442;Parent=gene3540;Dbxref=Genbank:WP_002213786.1;Name=WP_002213786.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NC_010634.1 RefSeq gene 3931999 3933156 . + . ID=gene3541;Name=YPTS_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17760;old_locus_tag=YPTS_3527 NC_010634.1 Protein Homology CDS 3931999 3933156 . + 0 ID=cds3443;Parent=gene3541;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11 NC_010634.1 RefSeq gene 3933219 3933428 . - . ID=gene3542;Name=YPTS_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17765 NC_010634.1 Protein Homology CDS 3933219 3933428 . - 0 ID=cds3444;Parent=gene3542;Dbxref=Genbank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11 NC_010634.1 RefSeq gene 3933575 3934408 . + . ID=gene3543;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YPTS_RS17770;old_locus_tag=YPTS_3528 NC_010634.1 Protein Homology CDS 3933575 3934408 . + 0 ID=cds3445;Parent=gene3543;Dbxref=Genbank:WP_011193092.1;Name=WP_011193092.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_011193092.1;transl_table=11 NC_010634.1 RefSeq gene 3934430 3936793 . - . ID=gene3544;Name=YPTS_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17775;old_locus_tag=YPTS_3529 NC_010634.1 Protein Homology CDS 3934430 3936793 . - 0 ID=cds3446;Parent=gene3544;Dbxref=Genbank:WP_011193093.1;Name=WP_011193093.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_011193093.1;transl_table=11 NC_010634.1 RefSeq gene 3937101 3938525 . - . ID=gene3545;Name=YPTS_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17780;old_locus_tag=YPTS_3530 NC_010634.1 Protein Homology CDS 3937101 3938525 . - 0 ID=cds3447;Parent=gene3545;Dbxref=Genbank:WP_002212176.1;Name=WP_002212176.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsP;protein_id=WP_002212176.1;transl_table=11 NC_010634.1 RefSeq gene 3938704 3939435 . - . ID=gene3546;Name=YPTS_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17785;old_locus_tag=YPTS_3532 NC_010634.1 Protein Homology CDS 3938704 3939435 . - 0 ID=cds3448;Parent=gene3546;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11 NC_010634.1 RefSeq gene 3939724 3941997 . - . ID=gene3547;Name=YPTS_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17790;old_locus_tag=YPTS_3533 NC_010634.1 Protein Homology CDS 3939724 3941997 . - 0 ID=cds3449;Parent=gene3547;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NC_010634.1 RefSeq gene 3942301 3942885 . + . ID=gene3548;Name=YPTS_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17795;old_locus_tag=YPTS_3534 NC_010634.1 Protein Homology CDS 3942301 3942885 . + 0 ID=cds3450;Parent=gene3548;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11 NC_010634.1 RefSeq gene 3942943 3943854 . - . ID=gene3549;Name=YPTS_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17800;old_locus_tag=YPTS_3535 NC_010634.1 Protein Homology CDS 3942943 3943854 . - 0 ID=cds3451;Parent=gene3549;Dbxref=Genbank:WP_011193094.1;Name=WP_011193094.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011193094.1;transl_table=11 NC_010634.1 RefSeq gene 3943858 3945753 . - . ID=gene3550;Name=YPTS_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17805;old_locus_tag=YPTS_3536 NC_010634.1 Protein Homology CDS 3943858 3945753 . - 0 ID=cds3452;Parent=gene3550;Dbxref=Genbank:WP_011193095.1;Name=WP_011193095.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_011193095.1;transl_table=11 NC_010634.1 RefSeq gene 3945855 3946436 . - . ID=gene3551;Name=YPTS_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17810;old_locus_tag=YPTS_3537 NC_010634.1 Protein Homology CDS 3945855 3946436 . - 0 ID=cds3453;Parent=gene3551;Dbxref=Genbank:WP_011193096.1;Name=WP_011193096.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_011193096.1;transl_table=11 NC_010634.1 RefSeq gene 3946436 3947263 . - . ID=gene3552;Name=YPTS_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17815;old_locus_tag=YPTS_3538 NC_010634.1 Protein Homology CDS 3946436 3947263 . - 0 ID=cds3454;Parent=gene3552;Dbxref=Genbank:WP_012104468.1;Name=WP_012104468.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_012104468.1;transl_table=11 NC_010634.1 RefSeq gene 3947344 3947769 . - . ID=gene3553;Name=YPTS_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17820;old_locus_tag=YPTS_3539 NC_010634.1 Protein Homology CDS 3947344 3947769 . - 0 ID=cds3455;Parent=gene3553;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11 NC_010634.1 RefSeq gene 3947803 3948435 . - . ID=gene3554;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YPTS_RS17825;old_locus_tag=YPTS_3540 NC_010634.1 Protein Homology CDS 3947803 3948435 . - 0 ID=cds3456;Parent=gene3554;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11 NC_010634.1 RefSeq gene 3948831 3950225 . + . ID=gene3555;Name=YPTS_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17830;old_locus_tag=YPTS_3541 NC_010634.1 Protein Homology CDS 3948831 3950225 . + 0 ID=cds3457;Parent=gene3555;Dbxref=Genbank:WP_011193098.1;Name=WP_011193098.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_011193098.1;transl_table=11 NC_010634.1 RefSeq gene 3950290 3950460 . - . ID=gene3556;Name=YPTS_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17835;old_locus_tag=YPTS_3542 NC_010634.1 Protein Homology CDS 3950290 3950460 . - 0 ID=cds3458;Parent=gene3556;Dbxref=Genbank:WP_012303541.1;Name=WP_012303541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303541.1;transl_table=11 NC_010634.1 RefSeq gene 3950529 3951212 . + . ID=gene3557;Name=YPTS_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17840;old_locus_tag=YPTS_3543 NC_010634.1 Protein Homology CDS 3950529 3951212 . + 0 ID=cds3459;Parent=gene3557;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11 NC_010634.1 RefSeq gene 3951222 3952382 . + . ID=gene3558;Name=YPTS_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17845;old_locus_tag=YPTS_3544 NC_010634.1 Protein Homology CDS 3951222 3952382 . + 0 ID=cds3460;Parent=gene3558;Dbxref=Genbank:WP_002212188.1;Name=WP_002212188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212188.1;transl_table=11 NC_010634.1 RefSeq gene 3952543 3953325 . - . ID=gene3559;Name=YPTS_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17850;old_locus_tag=YPTS_3545 NC_010634.1 Protein Homology CDS 3952543 3953325 . - 0 ID=cds3461;Parent=gene3559;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11 NC_010634.1 RefSeq gene 3953767 3954420 . - . ID=gene3560;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YPTS_RS17855;old_locus_tag=YPTS_3546 NC_010634.1 Protein Homology CDS 3953767 3954420 . - 0 ID=cds3462;Parent=gene3560;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NC_010634.1 RefSeq gene 3954582 3954834 . - . ID=gene3561;Name=YPTS_RS17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS17860;pseudo=true NC_010634.1 Protein Homology CDS 3954582 3954834 . - 0 ID=cds3463;Parent=gene3561;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 3954990 3955271 . + . ID=gene3562;Name=YPTS_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17865;old_locus_tag=YPTS_3548 NC_010634.1 Protein Homology CDS 3954990 3955271 . + 0 ID=cds3464;Parent=gene3562;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11 NC_010634.1 RefSeq repeat_region 3955385 3955560 . + . ID=id268;gbkey=repeat_region NC_010634.1 RefSeq gene 3955596 3956846 . - . ID=gene3563;Name=YPTS_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17870;old_locus_tag=YPTS_3549 NC_010634.1 Protein Homology CDS 3955596 3956846 . - 0 ID=cds3465;Parent=gene3563;Dbxref=Genbank:WP_002212192.1;Name=WP_002212192.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_002212192.1;transl_table=11 NC_010634.1 RefSeq gene 3956883 3958313 . - . ID=gene3564;Name=YPTS_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17875;old_locus_tag=YPTS_3550 NC_010634.1 Protein Homology CDS 3956883 3958313 . - 0 ID=cds3466;Parent=gene3564;Dbxref=Genbank:WP_011193099.1;Name=WP_011193099.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_011193099.1;transl_table=11 NC_010634.1 RefSeq gene 3958448 3961303 . - . ID=gene3565;Name=YPTS_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17880;old_locus_tag=YPTS_3551 NC_010634.1 Protein Homology CDS 3958448 3961303 . - 0 ID=cds3467;Parent=gene3565;Dbxref=Genbank:WP_002212194.1;Name=WP_002212194.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_002212194.1;transl_table=11 NC_010634.1 RefSeq gene 3961475 3962782 . - . ID=gene3566;Name=YPTS_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17885;old_locus_tag=YPTS_3552 NC_010634.1 Protein Homology CDS 3961475 3962782 . - 0 ID=cds3468;Parent=gene3566;Dbxref=Genbank:WP_002212195.1;Name=WP_002212195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212195.1;transl_table=11 NC_010634.1 RefSeq gene 3963086 3963706 . + . ID=gene3567;Name=YPTS_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17890;old_locus_tag=YPTS_3553 NC_010634.1 Protein Homology CDS 3963086 3963706 . + 0 ID=cds3469;Parent=gene3567;Dbxref=Genbank:WP_011193100.1;Name=WP_011193100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193100.1;transl_table=11 NC_010634.1 RefSeq gene 3963884 3965122 . + . ID=gene3568;Name=YPTS_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17895;old_locus_tag=YPTS_3555 NC_010634.1 Protein Homology CDS 3963884 3965122 . + 0 ID=cds3470;Parent=gene3568;Dbxref=Genbank:WP_011193101.1;Name=WP_011193101.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_011193101.1;transl_table=11 NC_010634.1 RefSeq gene 3965358 3966176 . - . ID=gene3569;Name=YPTS_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17900;old_locus_tag=YPTS_3556 NC_010634.1 Protein Homology CDS 3965358 3966176 . - 0 ID=cds3471;Parent=gene3569;Dbxref=Genbank:WP_002212198.1;Name=WP_002212198.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_002212198.1;transl_table=11 NC_010634.1 RefSeq gene 3966450 3966809 . - . ID=gene3570;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YPTS_RS17905;old_locus_tag=YPTS_3557 NC_010634.1 Protein Homology CDS 3966450 3966809 . - 0 ID=cds3472;Parent=gene3570;Dbxref=Genbank:WP_002212199.1;Name=WP_002212199.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002212199.1;transl_table=11 NC_010634.1 RefSeq gene 3966917 3967567 . + . ID=gene3571;Name=YPTS_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17910;old_locus_tag=YPTS_3558 NC_010634.1 Protein Homology CDS 3966917 3967567 . + 0 ID=cds3473;Parent=gene3571;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11 NC_010634.1 RefSeq gene 3967813 3968826 . - . ID=gene3572;Name=YPTS_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17915;old_locus_tag=YPTS_3559 NC_010634.1 Protein Homology CDS 3967813 3968826 . - 0 ID=cds3474;Parent=gene3572;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11 NC_010634.1 RefSeq gene 3969239 3969454 . + . ID=gene3573;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YPTS_RS17920;old_locus_tag=YPTS_3560 NC_010634.1 Protein Homology CDS 3969239 3969454 . + 0 ID=cds3475;Parent=gene3573;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NC_010634.1 RefSeq gene 3969590 3971338 . + . ID=gene3574;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=YPTS_RS17925;old_locus_tag=YPTS_3561 NC_010634.1 Protein Homology CDS 3969590 3971338 . + 0 ID=cds3476;Parent=gene3574;Dbxref=Genbank:WP_002210358.1;Name=WP_002210358.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NC_010634.1 RefSeq gene 3971496 3973334 . + . ID=gene3575;Name=YPTS_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17930;old_locus_tag=YPTS_3562 NC_010634.1 Protein Homology CDS 3971496 3973334 . + 0 ID=cds3477;Parent=gene3575;Dbxref=Genbank:WP_002210359.1;Name=WP_002210359.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NC_010634.1 RefSeq gene 3973530 3973606 . + . ID=gene3576;Name=YPTS_RS17935;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS17935;old_locus_tag=YPTS_R0050 NC_010634.1 tRNAscan-SE tRNA 3973530 3973606 . + . ID=rna90;Parent=gene3576;anticodon=(pos:3973564..3973566);gbkey=tRNA;product=tRNA-Met NC_010634.1 tRNAscan-SE exon 3973530 3973606 . + . ID=id269;Parent=rna90;anticodon=(pos:3973564..3973566);gbkey=tRNA;product=tRNA-Met NC_010634.1 RefSeq gene 3973776 3974606 . + . ID=gene3577;Name=YPTS_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17940;old_locus_tag=YPTS_3563 NC_010634.1 Protein Homology CDS 3973776 3974606 . + 0 ID=cds3478;Parent=gene3577;Dbxref=Genbank:WP_012414004.1;Name=WP_012414004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414004.1;transl_table=11 NC_010634.1 RefSeq gene 3974739 3974936 . - . ID=gene3578;Name=YPTS_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17945;old_locus_tag=YPTS_3564 NC_010634.1 Protein Homology CDS 3974739 3974936 . - 0 ID=cds3479;Parent=gene3578;Dbxref=Genbank:WP_012414005.1;Name=WP_012414005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414005.1;transl_table=11 NC_010634.1 RefSeq gene 3975112 3976767 . - . ID=gene3579;Name=YPTS_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17950;old_locus_tag=YPTS_3565 NC_010634.1 Protein Homology CDS 3975112 3976767 . - 0 ID=cds3480;Parent=gene3579;Dbxref=Genbank:WP_012414006.1;Name=WP_012414006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414006.1;transl_table=11 NC_010634.1 RefSeq gene 3976764 3977312 . - . ID=gene3580;Name=YPTS_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17955;old_locus_tag=YPTS_3566 NC_010634.1 Protein Homology CDS 3976764 3977312 . - 0 ID=cds3481;Parent=gene3580;Dbxref=Genbank:WP_012303700.1;Name=WP_012303700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303700.1;transl_table=11 NC_010634.1 RefSeq gene 3977278 3978009 . - . ID=gene3581;Name=YPTS_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17960;old_locus_tag=YPTS_3567 NC_010634.1 Protein Homology CDS 3977278 3978009 . - 0 ID=cds3482;Parent=gene3581;Dbxref=Genbank:WP_012414007.1;Name=WP_012414007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414007.1;transl_table=11 NC_010634.1 RefSeq gene 3977999 3978406 . - . ID=gene3582;Name=YPTS_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17965;old_locus_tag=YPTS_3568 NC_010634.1 Protein Homology CDS 3977999 3978406 . - 0 ID=cds3483;Parent=gene3582;Dbxref=Genbank:WP_049772382.1;Name=WP_049772382.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049772382.1;transl_table=11 NC_010634.1 RefSeq gene 3979068 3980081 . - . ID=gene3583;Name=YPTS_RS17970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS17970;partial=true;pseudo=true;start_range=.,3979068 NC_010634.1 Protein Homology CDS 3979068 3980081 . - 0 ID=cds3484;Parent=gene3583;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=phage tail protein;pseudo=true;start_range=.,3979068;transl_table=11 NC_010634.1 RefSeq gene 3980092 3980727 . - . ID=gene3584;Name=YPTS_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17975;old_locus_tag=YPTS_3570 NC_010634.1 Protein Homology CDS 3980092 3980727 . - 0 ID=cds3485;Parent=gene3584;Dbxref=Genbank:WP_012414010.1;Name=WP_012414010.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414010.1;transl_table=11 NC_010634.1 RefSeq gene 3980720 3981904 . - . ID=gene3585;Name=YPTS_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17980;old_locus_tag=YPTS_3571 NC_010634.1 Protein Homology CDS 3980720 3981904 . - 0 ID=cds3486;Parent=gene3585;Dbxref=Genbank:WP_012303695.1;Name=WP_012303695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303695.1;transl_table=11 NC_010634.1 RefSeq gene 3981897 3982229 . - . ID=gene3586;Name=YPTS_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17985;old_locus_tag=YPTS_3572 NC_010634.1 Protein Homology CDS 3981897 3982229 . - 0 ID=cds3487;Parent=gene3586;Dbxref=Genbank:WP_012303694.1;Name=WP_012303694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303694.1;transl_table=11 NC_010634.1 RefSeq gene 3982229 3984205 . - . ID=gene3587;Name=YPTS_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17990;old_locus_tag=YPTS_3573 NC_010634.1 Protein Homology CDS 3982229 3984205 . - 0 ID=cds3488;Parent=gene3587;Dbxref=Genbank:WP_012414011.1;Name=WP_012414011.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_012414011.1;transl_table=11 NC_010634.1 RefSeq gene 3984393 3984659 . - . ID=gene3588;Name=YPTS_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS17995;old_locus_tag=YPTS_3574 NC_010634.1 Protein Homology CDS 3984393 3984659 . - 0 ID=cds3489;Parent=gene3588;Dbxref=Genbank:WP_012303692.1;Name=WP_012303692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303692.1;transl_table=11 NC_010634.1 RefSeq gene 3984809 3985150 . - . ID=gene3589;Name=YPTS_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18005;old_locus_tag=YPTS_3575 NC_010634.1 Protein Homology CDS 3984809 3985150 . - 0 ID=cds3490;Parent=gene3589;Dbxref=Genbank:WP_012303691.1;Name=WP_012303691.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303691.1;transl_table=11 NC_010634.1 RefSeq gene 3985150 3985491 . - . ID=gene3590;Name=YPTS_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18010;old_locus_tag=YPTS_3576 NC_010634.1 Protein Homology CDS 3985150 3985491 . - 0 ID=cds3491;Parent=gene3590;Dbxref=Genbank:WP_024063639.1;Name=WP_024063639.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063639.1;transl_table=11 NC_010634.1 RefSeq gene 3985488 3985778 . - . ID=gene3591;Name=YPTS_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18015;old_locus_tag=YPTS_3577 NC_010634.1 Protein Homology CDS 3985488 3985778 . - 0 ID=cds3492;Parent=gene3591;Dbxref=Genbank:WP_012303689.1;Name=WP_012303689.1;gbkey=CDS;product=holin;protein_id=WP_012303689.1;transl_table=11 NC_010634.1 RefSeq gene 3985788 3986240 . - . ID=gene3592;Name=YPTS_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18020;old_locus_tag=YPTS_3578 NC_010634.1 Protein Homology CDS 3985788 3986240 . - 0 ID=cds3493;Parent=gene3592;Dbxref=Genbank:WP_012303688.1;Name=WP_012303688.1;gbkey=CDS;product=tail protein;protein_id=WP_012303688.1;transl_table=11 NC_010634.1 RefSeq gene 3986237 3987376 . - . ID=gene3593;Name=YPTS_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18025;old_locus_tag=YPTS_3579 NC_010634.1 Protein Homology CDS 3986237 3987376 . - 0 ID=cds3494;Parent=gene3593;Dbxref=Genbank:WP_012414012.1;Name=WP_012414012.1;gbkey=CDS;product=phage tail protein;protein_id=WP_012414012.1;transl_table=11 NC_010634.1 RefSeq gene 3987403 3988077 . - . ID=gene3594;Name=YPTS_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18030;old_locus_tag=YPTS_3580 NC_010634.1 Protein Homology CDS 3987403 3988077 . - 0 ID=cds3495;Parent=gene3594;Dbxref=Genbank:WP_032467120.1;Name=WP_032467120.1;gbkey=CDS;product=phage protein;protein_id=WP_032467120.1;transl_table=11 NC_010634.1 RefSeq gene 3988077 3988565 . - . ID=gene3595;Name=YPTS_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18035;old_locus_tag=YPTS_3581 NC_010634.1 Protein Homology CDS 3988077 3988565 . - 0 ID=cds3496;Parent=gene3595;Dbxref=Genbank:WP_012414014.1;Name=WP_012414014.1;gbkey=CDS;product=phage tail protein;protein_id=WP_012414014.1;transl_table=11 NC_010634.1 RefSeq gene 3988562 3989050 . - . ID=gene3596;Name=YPTS_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18040;old_locus_tag=YPTS_3582 NC_010634.1 Protein Homology CDS 3988562 3989050 . - 0 ID=cds3497;Parent=gene3596;Dbxref=Genbank:WP_032467119.1;Name=WP_032467119.1;gbkey=CDS;product=head completion protein;protein_id=WP_032467119.1;transl_table=11 NC_010634.1 RefSeq gene 3989110 3989808 . - . ID=gene3597;Name=YPTS_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18045;old_locus_tag=YPTS_3583 NC_010634.1 Protein Homology CDS 3989110 3989808 . - 0 ID=cds3498;Parent=gene3597;Dbxref=Genbank:WP_012414016.1;Name=WP_012414016.1;gbkey=CDS;product=terminase;protein_id=WP_012414016.1;transl_table=11 NC_010634.1 RefSeq gene 3989819 3990850 . - . ID=gene3598;Name=YPTS_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18050;old_locus_tag=YPTS_3584 NC_010634.1 Protein Homology CDS 3989819 3990850 . - 0 ID=cds3499;Parent=gene3598;Dbxref=Genbank:WP_012414017.1;Name=WP_012414017.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_012414017.1;transl_table=11 NC_010634.1 RefSeq gene 3990905 3991759 . - . ID=gene3599;Name=YPTS_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18055;old_locus_tag=YPTS_3585 NC_010634.1 Protein Homology CDS 3990905 3991759 . - 0 ID=cds3500;Parent=gene3599;Dbxref=Genbank:WP_012414018.1;Name=WP_012414018.1;gbkey=CDS;product=phage capsid scaffolding protein;protein_id=WP_012414018.1;transl_table=11 NC_010634.1 RefSeq gene 3991926 3993713 . + . ID=gene3600;Name=YPTS_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18060;old_locus_tag=YPTS_3586 NC_010634.1 Protein Homology CDS 3991926 3993713 . + 0 ID=cds3501;Parent=gene3600;Dbxref=Genbank:WP_012414019.1;Name=WP_012414019.1;Note=gpP%3B P protein%3B capsid packaging%3B P protein is probably the ATPase subunit of the terminase complex%2C which directs cos cleavage of closed monomeric dsDNA circles into linear genomes with 19 nt cohesive ssDNA ends%3B Q%2C P and M proteins are needed to package DNA into capsid proheads and conversion into mature capsids;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414019.1;transl_table=11 NC_010634.1 RefSeq gene 3993710 3994732 . + . ID=gene3601;Name=YPTS_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18065;old_locus_tag=YPTS_3587 NC_010634.1 Protein Homology CDS 3993710 3994732 . + 0 ID=cds3502;Parent=gene3601;Dbxref=Genbank:WP_012414020.1;Name=WP_012414020.1;gbkey=CDS;product=phage portal protein;protein_id=WP_012414020.1;transl_table=11 NC_010634.1 RefSeq gene 3994783 3995049 . + . ID=gene3602;Name=YPTS_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18070;old_locus_tag=YPTS_3588 NC_010634.1 Protein Homology CDS 3994783 3995049 . + 0 ID=cds3503;Parent=gene3602;Dbxref=Genbank:WP_012414021.1;Name=WP_012414021.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012414021.1;transl_table=11 NC_010634.1 RefSeq gene 3995345 3997432 . - . ID=gene3603;Name=YPTS_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18075;old_locus_tag=YPTS_3589 NC_010634.1 Protein Homology CDS 3995345 3997432 . - 0 ID=cds3504;Parent=gene3603;Dbxref=Genbank:WP_012414022.1;Name=WP_012414022.1;gbkey=CDS;product=replication protein A;protein_id=WP_012414022.1;transl_table=11 NC_010634.1 RefSeq gene 3997429 3997668 . - . ID=gene3604;Name=YPTS_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18080;old_locus_tag=YPTS_3590 NC_010634.1 Protein Homology CDS 3997429 3997668 . - 0 ID=cds3505;Parent=gene3604;Dbxref=Genbank:WP_012414023.1;Name=WP_012414023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414023.1;transl_table=11 NC_010634.1 RefSeq gene 3997747 3998154 . - . ID=gene3605;Name=YPTS_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18085;old_locus_tag=YPTS_3591 NC_010634.1 Protein Homology CDS 3997747 3998154 . - 0 ID=cds3506;Parent=gene3605;Dbxref=Genbank:WP_012414024.1;Name=WP_012414024.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414024.1;transl_table=11 NC_010634.1 RefSeq gene 3998164 3998538 . - . ID=gene3606;Name=YPTS_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18090;old_locus_tag=YPTS_3592 NC_010634.1 Protein Homology CDS 3998164 3998538 . - 0 ID=cds3507;Parent=gene3606;Dbxref=Genbank:WP_012414025.1;Name=WP_012414025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414025.1;transl_table=11 NC_010634.1 RefSeq gene 3998541 3998744 . - . ID=gene3607;Name=YPTS_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18095;old_locus_tag=YPTS_3593 NC_010634.1 Protein Homology CDS 3998541 3998744 . - 0 ID=cds3508;Parent=gene3607;Dbxref=Genbank:WP_012414026.1;Name=WP_012414026.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414026.1;transl_table=11 NC_010634.1 RefSeq gene 3998752 3999261 . - . ID=gene3608;Name=YPTS_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18100;old_locus_tag=YPTS_3594 NC_010634.1 Protein Homology CDS 3998752 3999261 . - 0 ID=cds3509;Parent=gene3608;Dbxref=Genbank:WP_012414027.1;Name=WP_012414027.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414027.1;transl_table=11 NC_010634.1 RefSeq gene 3999293 3999514 . - . ID=gene3609;Name=YPTS_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18105;old_locus_tag=YPTS_3595 NC_010634.1 Protein Homology CDS 3999293 3999514 . - 0 ID=cds3510;Parent=gene3609;Dbxref=Genbank:WP_012414028.1;Name=WP_012414028.1;gbkey=CDS;product=regulator;protein_id=WP_012414028.1;transl_table=11 NC_010634.1 RefSeq gene 3999629 4000207 . + . ID=gene3610;Name=YPTS_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18110;old_locus_tag=YPTS_3596 NC_010634.1 Protein Homology CDS 3999629 4000207 . + 0 ID=cds3511;Parent=gene3610;Dbxref=Genbank:WP_012414029.1;Name=WP_012414029.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414029.1;transl_table=11 NC_010634.1 RefSeq gene 4000217 4001122 . + . ID=gene3611;Name=YPTS_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18115 NC_010634.1 Protein Homology CDS 4000217 4001122 . + 0 ID=cds3512;Parent=gene3611;Dbxref=Genbank:WP_012414030.1;Name=WP_012414030.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414030.1;transl_table=11 NC_010634.1 RefSeq gene 4001154 4002209 . + . ID=gene3612;Name=YPTS_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18120;old_locus_tag=YPTS_3598 NC_010634.1 Protein Homology CDS 4001154 4002209 . + 0 ID=cds3513;Parent=gene3612;Dbxref=Genbank:WP_012414031.1;Name=WP_012414031.1;gbkey=CDS;product=recombinase;protein_id=WP_012414031.1;transl_table=11 NC_010634.1 RefSeq gene 4002576 4002914 . - . ID=gene3613;Name=YPTS_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18125 NC_010634.1 Protein Homology CDS 4002576 4002914 . - 0 ID=cds3514;Parent=gene3613;Dbxref=Genbank:WP_032466726.1;Name=WP_032466726.1;gbkey=CDS;product=terminase;protein_id=WP_032466726.1;transl_table=11 NC_010634.1 RefSeq gene 4002892 4003178 . - . ID=gene3614;Name=YPTS_RS18130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS18130;pseudo=true NC_010634.1 Protein Homology CDS 4002892 4003178 . - 0 ID=cds3515;Parent=gene3614;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase small subunit;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 4003070 4003190 . + . ID=id270;gbkey=repeat_region NC_010634.1 RefSeq gene 4003195 4003650 . - . ID=gene3615;Name=YPTS_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18135;old_locus_tag=YPTS_3600 NC_010634.1 Protein Homology CDS 4003195 4003650 . - 0 ID=cds3516;Parent=gene3615;Dbxref=Genbank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210360.1;transl_table=11 NC_010634.1 RefSeq gene 4003677 4004147 . - . ID=gene3616;Name=YPTS_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18140;old_locus_tag=YPTS_3601 NC_010634.1 Protein Homology CDS 4003677 4004147 . - 0 ID=cds3517;Parent=gene3616;Dbxref=Genbank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210361.1;transl_table=11 NC_010634.1 RefSeq gene 4004156 4005532 . - . ID=gene3617;Name=YPTS_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18145;old_locus_tag=YPTS_3602 NC_010634.1 Protein Homology CDS 4004156 4005532 . - 0 ID=cds3518;Parent=gene3617;Dbxref=Genbank:WP_012414033.1;Name=WP_012414033.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_012414033.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4005063 4005651 . + . ID=id271;gbkey=repeat_region NC_010634.1 RefSeq gene 4005665 4005895 . - . ID=gene3618;Name=YPTS_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18150;old_locus_tag=YPTS_3603 NC_010634.1 Protein Homology CDS 4005665 4005895 . - 0 ID=cds3519;Parent=gene3618;Dbxref=Genbank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11 NC_010634.1 RefSeq gene 4006053 4006252 . + . ID=gene3619;Name=YPTS_RS18155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS18155;pseudo=true NC_010634.1 Protein Homology CDS 4006053 4006252 . + 0 ID=cds3520;Parent=gene3619;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4006450 4006608 . + . ID=gene3620;Name=YPTS_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18160;old_locus_tag=YPTS_3604 NC_010634.1 Protein Homology CDS 4006450 4006608 . + 0 ID=cds3521;Parent=gene3620;Dbxref=Genbank:WP_002210363.1;Name=WP_002210363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210363.1;transl_table=11 NC_010634.1 RefSeq gene 4006605 4006817 . - . ID=gene3621;Name=YPTS_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18165 NC_010634.1 Protein Homology CDS 4006605 4006817 . - 0 ID=cds3522;Parent=gene3621;Dbxref=Genbank:WP_002218980.1;Name=WP_002218980.1;gbkey=CDS;product=cell filamentation protein Fic;protein_id=WP_002218980.1;transl_table=11 NC_010634.1 RefSeq gene 4006958 4007161 . - . ID=gene3622;Name=YPTS_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18170 NC_010634.1 Protein Homology CDS 4006958 4007161 . - 0 ID=cds3523;Parent=gene3622;Dbxref=Genbank:WP_002210365.1;Name=WP_002210365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210365.1;transl_table=11 NC_010634.1 RefSeq gene 4007588 4008544 . - . ID=gene3623;Name=YPTS_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18175;old_locus_tag=YPTS_3607 NC_010634.1 Protein Homology CDS 4007588 4008544 . - 0 ID=cds3524;Parent=gene3623;Dbxref=Genbank:WP_011193104.1;Name=WP_011193104.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011193104.1;transl_table=11 NC_010634.1 RefSeq gene 4008706 4009422 . + . ID=gene3624;Name=YPTS_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18180;old_locus_tag=YPTS_3608 NC_010634.1 Protein Homology CDS 4008706 4009422 . + 0 ID=cds3525;Parent=gene3624;Dbxref=Genbank:WP_011193105.1;Name=WP_011193105.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_011193105.1;transl_table=11 NC_010634.1 RefSeq gene 4009682 4009984 . + . ID=gene3625;Name=YPTS_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18185;old_locus_tag=YPTS_3609 NC_010634.1 Protein Homology CDS 4009682 4009984 . + 0 ID=cds3526;Parent=gene3625;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NC_010634.1 RefSeq gene 4010199 4010603 . - . ID=gene3626;Name=YPTS_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18190;old_locus_tag=YPTS_3610 NC_010634.1 Protein Homology CDS 4010199 4010603 . - 0 ID=cds3527;Parent=gene3626;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11 NC_010634.1 RefSeq gene 4010888 4011268 . - . ID=gene3627;Name=YPTS_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18195;old_locus_tag=YPTS_3611 NC_010634.1 Protein Homology CDS 4010888 4011268 . - 0 ID=cds3528;Parent=gene3627;Dbxref=Genbank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210370.1;transl_table=11 NC_010634.1 RefSeq gene 4011279 4011911 . - . ID=gene3628;Name=YPTS_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18200;old_locus_tag=YPTS_3612 NC_010634.1 Protein Homology CDS 4011279 4011911 . - 0 ID=cds3529;Parent=gene3628;Dbxref=Genbank:WP_011193106.1;Name=WP_011193106.1;gbkey=CDS;product=histidine kinase;protein_id=WP_011193106.1;transl_table=11 NC_010634.1 RefSeq gene 4012045 4012482 . - . ID=gene3629;Name=YPTS_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18205;old_locus_tag=YPTS_3613 NC_010634.1 Protein Homology CDS 4012045 4012482 . - 0 ID=cds3530;Parent=gene3629;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11 NC_010634.1 RefSeq gene 4012495 4013957 . - . ID=gene3630;Name=YPTS_RS18210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS18210;pseudo=true NC_010634.1 Protein Homology CDS 4012495 4013957 . - 0 ID=cds3531;Parent=gene3630;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sodium:proton antiporter;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4013950 4015182 . - . ID=gene3631;Name=YPTS_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18215;old_locus_tag=YPTS_3615 NC_010634.1 Protein Homology CDS 4013950 4015182 . - 0 ID=cds3532;Parent=gene3631;Dbxref=Genbank:WP_012414036.1;Name=WP_012414036.1;gbkey=CDS;product=aminotransferase;protein_id=WP_012414036.1;transl_table=11 NC_010634.1 RefSeq gene 4015669 4015776 . + . ID=gene3632;Name=YPTS_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18220 NC_010634.1 Protein Homology CDS 4015669 4015776 . + 0 ID=cds3533;Parent=gene3632;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11 NC_010634.1 RefSeq gene 4015949 4016149 . + . ID=gene3633;Name=YPTS_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18225;old_locus_tag=YPTS_3616 NC_010634.1 Protein Homology CDS 4015949 4016149 . + 0 ID=cds3534;Parent=gene3633;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NC_010634.1 RefSeq gene 4016146 4016481 . + . ID=gene3634;Name=YPTS_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18230 NC_010634.1 Protein Homology CDS 4016146 4016481 . + 0 ID=cds3535;Parent=gene3634;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11 NC_010634.1 RefSeq gene 4016491 4017540 . + . ID=gene3635;Name=YPTS_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18235;old_locus_tag=YPTS_3618 NC_010634.1 Protein Homology CDS 4016491 4017540 . + 0 ID=cds3536;Parent=gene3635;Dbxref=Genbank:WP_011193108.1;Name=WP_011193108.1;gbkey=CDS;product=hemolysin D;protein_id=WP_011193108.1;transl_table=11 NC_010634.1 RefSeq gene 4017524 4019425 . + . ID=gene3636;Name=YPTS_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18240;old_locus_tag=YPTS_3619 NC_010634.1 Protein Homology CDS 4017524 4019425 . + 0 ID=cds3537;Parent=gene3636;Dbxref=Genbank:WP_012414037.1;Name=WP_012414037.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_012414037.1;transl_table=11 NC_010634.1 RefSeq gene 4019430 4020956 . + . ID=gene3637;Name=YPTS_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18245;old_locus_tag=YPTS_3620 NC_010634.1 Protein Homology CDS 4019430 4020956 . + 0 ID=cds3538;Parent=gene3637;Dbxref=Genbank:WP_002214220.1;Name=WP_002214220.1;gbkey=CDS;product=transporter;protein_id=WP_002214220.1;transl_table=11 NC_010634.1 RefSeq gene 4021039 4023222 . - . ID=gene3638;Name=YPTS_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18250;old_locus_tag=YPTS_3621 NC_010634.1 Protein Homology CDS 4021039 4023222 . - 0 ID=cds3539;Parent=gene3638;Dbxref=Genbank:WP_012414038.1;Name=WP_012414038.1;gbkey=CDS;product=glycosidase;protein_id=WP_012414038.1;transl_table=11 NC_010634.1 RefSeq gene 4023273 4023788 . - . ID=gene3639;Name=YPTS_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18255;old_locus_tag=YPTS_3622 NC_010634.1 Protein Homology CDS 4023273 4023788 . - 0 ID=cds3540;Parent=gene3639;Dbxref=Genbank:WP_012104453.1;Name=WP_012104453.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104453.1;transl_table=11 NC_010634.1 RefSeq gene 4023785 4024603 . - . ID=gene3640;Name=YPTS_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18260;old_locus_tag=YPTS_3623 NC_010634.1 Protein Homology CDS 4023785 4024603 . - 0 ID=cds3541;Parent=gene3640;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11 NC_010634.1 RefSeq gene 4024603 4025484 . - . ID=gene3641;Name=YPTS_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18265;old_locus_tag=YPTS_3624 NC_010634.1 Protein Homology CDS 4024603 4025484 . - 0 ID=cds3542;Parent=gene3641;Dbxref=Genbank:WP_002210382.1;Name=WP_002210382.1;gbkey=CDS;product=permease;protein_id=WP_002210382.1;transl_table=11 NC_010634.1 RefSeq gene 4025538 4026782 . - . ID=gene3642;Name=YPTS_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18270;old_locus_tag=YPTS_3625 NC_010634.1 Protein Homology CDS 4025538 4026782 . - 0 ID=cds3543;Parent=gene3642;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11 NC_010634.1 RefSeq gene 4026859 4027845 . - . ID=gene3643;Name=YPTS_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18275;old_locus_tag=YPTS_3626 NC_010634.1 Protein Homology CDS 4026859 4027845 . - 0 ID=cds3544;Parent=gene3643;Dbxref=Genbank:WP_011193115.1;Name=WP_011193115.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011193115.1;transl_table=11 NC_010634.1 RefSeq gene 4027954 4031307 . - . ID=gene3644;Name=YPTS_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18280;old_locus_tag=YPTS_3627 NC_010634.1 Protein Homology CDS 4027954 4031307 . - 0 ID=cds3545;Parent=gene3644;Dbxref=Genbank:WP_012414039.1;Name=WP_012414039.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414039.1;transl_table=11 NC_010634.1 RefSeq gene 4031390 4032505 . - . ID=gene3645;Name=YPTS_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18285;old_locus_tag=YPTS_3628 NC_010634.1 Protein Homology CDS 4031390 4032505 . - 0 ID=cds3546;Parent=gene3645;Dbxref=Genbank:WP_002353714.1;Name=WP_002353714.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002353714.1;transl_table=11 NC_010634.1 RefSeq gene 4032831 4034210 . + . ID=gene3646;Name=YPTS_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18290;old_locus_tag=YPTS_3629 NC_010634.1 Protein Homology CDS 4032831 4034210 . + 0 ID=cds3547;Parent=gene3646;Dbxref=Genbank:WP_011193117.1;Name=WP_011193117.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193117.1;transl_table=11 NC_010634.1 RefSeq gene 4034312 4035307 . + . ID=gene3647;Name=YPTS_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18295;old_locus_tag=YPTS_3630 NC_010634.1 Protein Homology CDS 4034312 4035307 . + 0 ID=cds3548;Parent=gene3647;Dbxref=Genbank:WP_012414040.1;Name=WP_012414040.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414040.1;transl_table=11 NC_010634.1 RefSeq gene 4035367 4037652 . + . ID=gene3648;Name=YPTS_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18300;old_locus_tag=YPTS_3631 NC_010634.1 Protein Homology CDS 4035367 4037652 . + 0 ID=cds3549;Parent=gene3648;Dbxref=Genbank:WP_012414041.1;Name=WP_012414041.1;gbkey=CDS;product=autotransporter;protein_id=WP_012414041.1;transl_table=11 NC_010634.1 RefSeq gene 4037920 4038321 . - . ID=gene3649;Name=YPTS_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18305;old_locus_tag=YPTS_3632 NC_010634.1 GeneMarkS+ CDS 4037920 4038321 . - 0 ID=cds3550;Parent=gene3649;Dbxref=Genbank:WP_032466973.1;Name=WP_032466973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466973.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4037971 4038302 . + . ID=id272;gbkey=repeat_region NC_010634.1 RefSeq gene 4038387 4038635 . - . ID=gene3650;Name=YPTS_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18310;old_locus_tag=YPTS_3633 NC_010634.1 Protein Homology CDS 4038387 4038635 . - 0 ID=cds3551;Parent=gene3650;Dbxref=Genbank:WP_012104439.1;Name=WP_012104439.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104439.1;transl_table=11 NC_010634.1 RefSeq gene 4038640 4038957 . - . ID=gene3651;Name=YPTS_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18315;old_locus_tag=YPTS_3634 NC_010634.1 Protein Homology CDS 4038640 4038957 . - 0 ID=cds3552;Parent=gene3651;Dbxref=Genbank:WP_011193121.1;Name=WP_011193121.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193121.1;transl_table=11 NC_010634.1 RefSeq gene 4039242 4039595 . - . ID=gene3652;Name=YPTS_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18320;old_locus_tag=YPTS_3636 NC_010634.1 Protein Homology CDS 4039242 4039595 . - 0 ID=cds3553;Parent=gene3652;Dbxref=Genbank:WP_011193122.1;Name=WP_011193122.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193122.1;transl_table=11 NC_010634.1 RefSeq gene 4039595 4041520 . - . ID=gene3653;Name=YPTS_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18325;old_locus_tag=YPTS_3637 NC_010634.1 Protein Homology CDS 4039595 4041520 . - 0 ID=cds3554;Parent=gene3653;Dbxref=Genbank:WP_042593128.1;Name=WP_042593128.1;gbkey=CDS;product=adhesin;protein_id=WP_042593128.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4040379 4041599 . + . ID=id273;gbkey=repeat_region NC_010634.1 RefSeq gene 4041646 4042146 . - . ID=gene3654;Name=YPTS_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18330;old_locus_tag=YPTS_3638 NC_010634.1 Protein Homology CDS 4041646 4042146 . - 0 ID=cds3555;Parent=gene3654;Dbxref=Genbank:WP_011193123.1;Name=WP_011193123.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193123.1;transl_table=11 NC_010634.1 RefSeq gene 4042146 4045379 . - . ID=gene3655;Name=YPTS_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18335;old_locus_tag=YPTS_3639 NC_010634.1 Protein Homology CDS 4042146 4045379 . - 0 ID=cds3556;Parent=gene3655;Dbxref=Genbank:WP_012414044.1;Name=WP_012414044.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414044.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4043029 4045448 . + . ID=id274;gbkey=repeat_region NC_010634.1 RefSeq gene 4045482 4045787 . - . ID=gene3656;Name=YPTS_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18340;old_locus_tag=YPTS_3640 NC_010634.1 Protein Homology CDS 4045482 4045787 . - 0 ID=cds3557;Parent=gene3656;Dbxref=Genbank:WP_012303507.1;Name=WP_012303507.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303507.1;transl_table=11 NC_010634.1 RefSeq gene 4045794 4048358 . - . ID=gene3657;Name=YPTS_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21650;old_locus_tag=YPTS_3641 NC_010634.1 Protein Homology CDS 4045794 4048358 . - 0 ID=cds3558;Parent=gene3657;Dbxref=Genbank:WP_012414045.1;Name=WP_012414045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414045.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4046837 4048426 . + . ID=id275;gbkey=repeat_region NC_010634.1 RefSeq gene 4048639 4049028 . - . ID=gene3658;Name=YPTS_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18355;old_locus_tag=YPTS_3642 NC_010634.1 Protein Homology CDS 4048639 4049028 . - 0 ID=cds3559;Parent=gene3658;Dbxref=Genbank:WP_011193124.1;Name=WP_011193124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193124.1;transl_table=11 NC_010634.1 RefSeq gene 4049034 4049861 . - . ID=gene3659;Name=YPTS_RS18360;end_range=4049861,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS18360;old_locus_tag=YPTS_3643;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 4049034 4049861 . - 0 ID=cds3560;Parent=gene3659;end_range=4049861,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hemagglutinin;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4049986 4050183 . - . ID=gene3660;Name=YPTS_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18365;old_locus_tag=YPTS_3644 NC_010634.1 Protein Homology CDS 4049986 4050183 . - 0 ID=cds3561;Parent=gene3660;Dbxref=Genbank:WP_012414047.1;Name=WP_012414047.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414047.1;transl_table=11 NC_010634.1 RefSeq gene 4050194 4060330 . - . ID=gene3661;Name=YPTS_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18370;old_locus_tag=YPTS_3645 NC_010634.1 Protein Homology CDS 4050194 4060330 . - 0 ID=cds3562;Parent=gene3661;Dbxref=Genbank:WP_012414048.1;Name=WP_012414048.1;gbkey=CDS;product=adhesin;protein_id=WP_012414048.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4051062 4053484 . + . ID=id276;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 4053692 4054023 . + . ID=id277;gbkey=repeat_region NC_010634.1 RefSeq gene 4060375 4062063 . - . ID=gene3662;Name=YPTS_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18375;old_locus_tag=YPTS_3646 NC_010634.1 Protein Homology CDS 4060375 4062063 . - 0 ID=cds3563;Parent=gene3662;Dbxref=Genbank:WP_011193126.1;Name=WP_011193126.1;gbkey=CDS;product=hemolysin activator/exporter;protein_id=WP_011193126.1;transl_table=11 NC_010634.1 RefSeq gene 4062778 4063416 . + . ID=gene3663;Name=YPTS_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18380;old_locus_tag=YPTS_3647 NC_010634.1 Protein Homology CDS 4062778 4063416 . + 0 ID=cds3564;Parent=gene3663;Dbxref=Genbank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002210395.1;transl_table=11 NC_010634.1 RefSeq gene 4063449 4064090 . + . ID=gene3664;Name=YPTS_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18385;old_locus_tag=YPTS_3648 NC_010634.1 Protein Homology CDS 4063449 4064090 . + 0 ID=cds3565;Parent=gene3664;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11 NC_010634.1 RefSeq gene 4064092 4064730 . + . ID=gene3665;Name=YPTS_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18390;old_locus_tag=YPTS_3649 NC_010634.1 Protein Homology CDS 4064092 4064730 . + 0 ID=cds3566;Parent=gene3665;Dbxref=Genbank:WP_041175574.1;Name=WP_041175574.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_041175574.1;transl_table=11 NC_010634.1 RefSeq gene 4064832 4065872 . + . ID=gene3666;Name=YPTS_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18395;old_locus_tag=YPTS_3650 NC_010634.1 Protein Homology CDS 4064832 4065872 . + 0 ID=cds3567;Parent=gene3666;Dbxref=Genbank:WP_002230582.1;Name=WP_002230582.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230582.1;transl_table=11 NC_010634.1 RefSeq gene 4065872 4067620 . + . ID=gene3667;Name=YPTS_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18400;old_locus_tag=YPTS_3651 NC_010634.1 Protein Homology CDS 4065872 4067620 . + 0 ID=cds3568;Parent=gene3667;Dbxref=Genbank:WP_011193128.1;Name=WP_011193128.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193128.1;transl_table=11 NC_010634.1 RefSeq gene 4067652 4069151 . + . ID=gene3668;Name=YPTS_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18405;old_locus_tag=YPTS_3652 NC_010634.1 Protein Homology CDS 4067652 4069151 . + 0 ID=cds3569;Parent=gene3668;Dbxref=Genbank:WP_002230581.1;Name=WP_002230581.1;gbkey=CDS;product=kinase;protein_id=WP_002230581.1;transl_table=11 NC_010634.1 RefSeq gene 4069213 4069446 . - . ID=gene3669;Name=YPTS_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18410 NC_010634.1 Protein Homology CDS 4069213 4069446 . - 0 ID=cds3570;Parent=gene3669;Dbxref=Genbank:WP_002214938.1;Name=WP_002214938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214938.1;transl_table=11 NC_010634.1 RefSeq gene 4069542 4070111 . + . ID=gene3670;Name=YPTS_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18415;old_locus_tag=YPTS_3653 NC_010634.1 Protein Homology CDS 4069542 4070111 . + 0 ID=cds3571;Parent=gene3670;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11 NC_010634.1 RefSeq gene 4070324 4072345 . + . ID=gene3671;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=YPTS_RS18420;old_locus_tag=YPTS_3654 NC_010634.1 Protein Homology CDS 4070324 4072345 . + 0 ID=cds3572;Parent=gene3671;Dbxref=Genbank:WP_011193129.1;Name=WP_011193129.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_011193129.1;transl_table=11 NC_010634.1 RefSeq gene 4072461 4073648 . - . ID=gene3672;Name=YPTS_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18425;old_locus_tag=YPTS_3655 NC_010634.1 Protein Homology CDS 4072461 4073648 . - 0 ID=cds3573;Parent=gene3672;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11 NC_010634.1 RefSeq gene 4074294 4077014 . + . ID=gene3673;Name=YPTS_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18430;old_locus_tag=YPTS_3656 NC_010634.1 Protein Homology CDS 4074294 4077014 . + 0 ID=cds3574;Parent=gene3673;Dbxref=Genbank:WP_041175575.1;Name=WP_041175575.1;gbkey=CDS;product=autotransporter;protein_id=WP_041175575.1;transl_table=11 NC_010634.1 RefSeq gene 4077270 4077779 . + . ID=gene3674;Name=YPTS_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18435;old_locus_tag=YPTS_3657 NC_010634.1 Protein Homology CDS 4077270 4077779 . + 0 ID=cds3575;Parent=gene3674;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11 NC_010634.1 RefSeq gene 4077997 4078992 . + . ID=gene3675;Name=YPTS_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18440;old_locus_tag=YPTS_3658 NC_010634.1 Protein Homology CDS 4077997 4078992 . + 0 ID=cds3576;Parent=gene3675;Dbxref=Genbank:WP_012414051.1;Name=WP_012414051.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_012414051.1;transl_table=11 NC_010634.1 RefSeq gene 4079527 4080783 . + . ID=gene3676;Name=YPTS_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18445;old_locus_tag=YPTS_3659 NC_010634.1 Protein Homology CDS 4079527 4080783 . + 0 ID=cds3577;Parent=gene3676;Dbxref=Genbank:WP_002216063.1;Name=WP_002216063.1;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=WP_002216063.1;transl_table=11 NC_010634.1 RefSeq gene 4080850 4081380 . - . ID=gene3677;Name=YPTS_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18450;old_locus_tag=YPTS_3660 NC_010634.1 Protein Homology CDS 4080850 4081380 . - 0 ID=cds3578;Parent=gene3677;Dbxref=Genbank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210407.1;transl_table=11 NC_010634.1 RefSeq gene 4081533 4083023 . - . ID=gene3678;Name=YPTS_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18455;old_locus_tag=YPTS_3661 NC_010634.1 Protein Homology CDS 4081533 4083023 . - 0 ID=cds3579;Parent=gene3678;Dbxref=Genbank:WP_012104427.1;Name=WP_012104427.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_012104427.1;transl_table=11 NC_010634.1 RefSeq gene 4083034 4084485 . - . ID=gene3679;Name=YPTS_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18460;old_locus_tag=YPTS_3662 NC_010634.1 Protein Homology CDS 4083034 4084485 . - 0 ID=cds3580;Parent=gene3679;Dbxref=Genbank:WP_012303499.1;Name=WP_012303499.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_012303499.1;transl_table=11 NC_010634.1 RefSeq gene 4084684 4086093 . - . ID=gene3680;Name=YPTS_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18465;old_locus_tag=YPTS_3663 NC_010634.1 Protein Homology CDS 4084684 4086093 . - 0 ID=cds3581;Parent=gene3680;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11 NC_010634.1 RefSeq gene 4086625 4086792 . - . ID=gene3681;Name=YPTS_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18470 NC_010634.1 Protein Homology CDS 4086625 4086792 . - 0 ID=cds3582;Parent=gene3681;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11 NC_010634.1 RefSeq gene 4086842 4088143 . + . ID=gene3682;Name=YPTS_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18475;old_locus_tag=YPTS_3664 NC_010634.1 Protein Homology CDS 4086842 4088143 . + 0 ID=cds3583;Parent=gene3682;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11 NC_010634.1 RefSeq gene 4088406 4089200 . + . ID=gene3683;Name=YPTS_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18480;old_locus_tag=YPTS_3665 NC_010634.1 Protein Homology CDS 4088406 4089200 . + 0 ID=cds3584;Parent=gene3683;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11 NC_010634.1 RefSeq gene 4089449 4089982 . + . ID=gene3684;Name=YPTS_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18485;old_locus_tag=YPTS_3666 NC_010634.1 Protein Homology CDS 4089449 4089982 . + 0 ID=cds3585;Parent=gene3684;Dbxref=Genbank:WP_012303498.1;Name=WP_012303498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303498.1;transl_table=11 NC_010634.1 RefSeq gene 4090260 4090958 . + . ID=gene3685;Name=YPTS_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18490;old_locus_tag=YPTS_3667 NC_010634.1 Protein Homology CDS 4090260 4090958 . + 0 ID=cds3586;Parent=gene3685;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11 NC_010634.1 RefSeq gene 4090955 4091344 . + . ID=gene3686;Name=YPTS_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18495;old_locus_tag=YPTS_3668 NC_010634.1 Protein Homology CDS 4090955 4091344 . + 0 ID=cds3587;Parent=gene3686;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11 NC_010634.1 RefSeq gene 4091570 4091950 . + . ID=gene3687;Name=YPTS_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18500;old_locus_tag=YPTS_3669 NC_010634.1 Protein Homology CDS 4091570 4091950 . + 0 ID=cds3588;Parent=gene3687;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11 NC_010634.1 RefSeq gene 4091954 4092100 . + . ID=gene3688;Name=YPTS_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18505 NC_010634.1 Protein Homology CDS 4091954 4092100 . + 0 ID=cds3589;Parent=gene3688;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11 NC_010634.1 RefSeq gene 4092105 4092410 . + . ID=gene3689;Name=YPTS_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18510;old_locus_tag=YPTS_3670 NC_010634.1 Protein Homology CDS 4092105 4092410 . + 0 ID=cds3590;Parent=gene3689;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11 NC_010634.1 RefSeq gene 4092413 4092808 . + . ID=gene3690;Name=YPTS_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18515;old_locus_tag=YPTS_3671 NC_010634.1 Protein Homology CDS 4092413 4092808 . + 0 ID=cds3591;Parent=gene3690;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11 NC_010634.1 RefSeq gene 4092805 4093089 . + . ID=gene3691;Name=YPTS_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18520;old_locus_tag=YPTS_3672 NC_010634.1 Protein Homology CDS 4092805 4093089 . + 0 ID=cds3592;Parent=gene3691;Dbxref=Genbank:WP_011193134.1;Name=WP_011193134.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_011193134.1;transl_table=11 NC_010634.1 RefSeq gene 4093393 4093788 . + . ID=gene3692;Name=YPTS_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18525;old_locus_tag=YPTS_3673 NC_010634.1 Protein Homology CDS 4093393 4093788 . + 0 ID=cds3593;Parent=gene3692;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11 NC_010634.1 RefSeq gene 4093874 4094860 . + . ID=gene3693;Name=YPTS_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18530;old_locus_tag=YPTS_3674 NC_010634.1 Protein Homology CDS 4093874 4094860 . + 0 ID=cds3594;Parent=gene3693;Dbxref=Genbank:WP_011193135.1;Name=WP_011193135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193135.1;transl_table=11 NC_010634.1 RefSeq gene 4094991 4095884 . - . ID=gene3694;Name=YPTS_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18535;old_locus_tag=YPTS_3675 NC_010634.1 Protein Homology CDS 4094991 4095884 . - 0 ID=cds3595;Parent=gene3694;Dbxref=Genbank:WP_011193136.1;Name=WP_011193136.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011193136.1;transl_table=11 NC_010634.1 RefSeq gene 4096146 4096850 . + . ID=gene3695;Name=YPTS_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18540;old_locus_tag=YPTS_3676 NC_010634.1 Protein Homology CDS 4096146 4096850 . + 0 ID=cds3596;Parent=gene3695;Dbxref=Genbank:WP_011193137.1;Name=WP_011193137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193137.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4096888 4097298 . + . ID=id278;gbkey=repeat_region NC_010634.1 RefSeq gene 4097276 4097654 . - . ID=gene3696;Name=YPTS_RS21660;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=YPTS_RS21660 NC_010634.1 cmsearch ncRNA 4097276 4097654 . - . ID=rna91;Parent=gene3696;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_010634.1 cmsearch exon 4097276 4097654 . - . ID=id279;Parent=rna91;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_010634.1 RefSeq gene 4097674 4098573 . - . ID=gene3697;Name=YPTS_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18545;old_locus_tag=YPTS_3677 NC_010634.1 Protein Homology CDS 4097674 4098573 . - 0 ID=cds3597;Parent=gene3697;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NC_010634.1 RefSeq gene 4098636 4100609 . + . ID=gene3698;Name=YPTS_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18550;old_locus_tag=YPTS_3678 NC_010634.1 Protein Homology CDS 4098636 4100609 . + 0 ID=cds3598;Parent=gene3698;Dbxref=Genbank:WP_011193138.1;Name=WP_011193138.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_011193138.1;transl_table=11 NC_010634.1 RefSeq gene 4100708 4101061 . + . ID=gene3699;Name=YPTS_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18555;old_locus_tag=YPTS_3679 NC_010634.1 Protein Homology CDS 4100708 4101061 . + 0 ID=cds3599;Parent=gene3699;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11 NC_010634.1 RefSeq gene 4101332 4101922 . + . ID=gene3700;Name=YPTS_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18560;old_locus_tag=YPTS_3680 NC_010634.1 Protein Homology CDS 4101332 4101922 . + 0 ID=cds3600;Parent=gene3700;Dbxref=Genbank:WP_011193139.1;Name=WP_011193139.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_011193139.1;transl_table=11 NC_010634.1 RefSeq gene 4101933 4102508 . + . ID=gene3701;Name=YPTS_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18565;old_locus_tag=YPTS_3681 NC_010634.1 Protein Homology CDS 4101933 4102508 . + 0 ID=cds3601;Parent=gene3701;Dbxref=Genbank:WP_011193140.1;Name=WP_011193140.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193140.1;transl_table=11 NC_010634.1 RefSeq gene 4102715 4103440 . - . ID=gene3702;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YPTS_RS18570;old_locus_tag=YPTS_3682 NC_010634.1 Protein Homology CDS 4102715 4103440 . - 0 ID=cds3602;Parent=gene3702;Dbxref=Genbank:WP_011193141.1;Name=WP_011193141.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_011193141.1;transl_table=11 NC_010634.1 RefSeq gene 4103437 4104090 . - . ID=gene3703;Name=YPTS_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18575;old_locus_tag=YPTS_3683 NC_010634.1 Protein Homology CDS 4103437 4104090 . - 0 ID=cds3603;Parent=gene3703;Dbxref=Genbank:WP_002210143.1;Name=WP_002210143.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_002210143.1;transl_table=11 NC_010634.1 RefSeq gene 4104120 4104314 . - . ID=gene3704;Name=YPTS_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18580 NC_010634.1 Protein Homology CDS 4104120 4104314 . - 0 ID=cds3604;Parent=gene3704;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11 NC_010634.1 RefSeq gene 4104332 4106668 . - . ID=gene3705;Name=YPTS_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18585;old_locus_tag=YPTS_3684 NC_010634.1 Protein Homology CDS 4104332 4106668 . - 0 ID=cds3605;Parent=gene3705;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11 NC_010634.1 RefSeq gene 4106699 4106917 . - . ID=gene3706;Name=YPTS_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18590;old_locus_tag=YPTS_3685 NC_010634.1 Protein Homology CDS 4106699 4106917 . - 0 ID=cds3606;Parent=gene3706;Dbxref=Genbank:WP_012303491.1;Name=WP_012303491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303491.1;transl_table=11 NC_010634.1 RefSeq gene 4106952 4107875 . - . ID=gene3707;Name=YPTS_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18595;old_locus_tag=YPTS_3686 NC_010634.1 Protein Homology CDS 4106952 4107875 . - 0 ID=cds3607;Parent=gene3707;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11 NC_010634.1 RefSeq gene 4108698 4113155 . + . ID=gene3708;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YPTS_RS18600;old_locus_tag=YPTS_3687 NC_010634.1 Protein Homology CDS 4108698 4113155 . + 0 ID=cds3608;Parent=gene3708;Dbxref=Genbank:WP_011193143.1;Name=WP_011193143.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_011193143.1;transl_table=11 NC_010634.1 RefSeq gene 4113165 4114583 . + . ID=gene3709;Name=YPTS_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18605;old_locus_tag=YPTS_3688 NC_010634.1 Protein Homology CDS 4113165 4114583 . + 0 ID=cds3609;Parent=gene3709;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4114647 4114813 . + . ID=id280;gbkey=repeat_region NC_010634.1 RefSeq gene 4115183 4115668 . + . ID=gene3710;Name=YPTS_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18610;old_locus_tag=YPTS_3689 NC_010634.1 Protein Homology CDS 4115183 4115668 . + 0 ID=cds3610;Parent=gene3710;Dbxref=Genbank:WP_011193144.1;Name=WP_011193144.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193144.1;transl_table=11 NC_010634.1 RefSeq gene 4115821 4116336 . - . ID=gene3711;Name=YPTS_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18615;old_locus_tag=YPTS_3690 NC_010634.1 Protein Homology CDS 4115821 4116336 . - 0 ID=cds3611;Parent=gene3711;Dbxref=Genbank:WP_002216203.1;Name=WP_002216203.1;gbkey=CDS;product=peptidase;protein_id=WP_002216203.1;transl_table=11 NC_010634.1 RefSeq gene 4116342 4116983 . - . ID=gene3712;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YPTS_RS18620;old_locus_tag=YPTS_3691 NC_010634.1 Protein Homology CDS 4116342 4116983 . - 0 ID=cds3612;Parent=gene3712;Dbxref=Genbank:WP_002210135.1;Name=WP_002210135.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_002210135.1;transl_table=11 NC_010634.1 RefSeq gene 4117163 4117360 . + . ID=gene3713;Name=YPTS_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18625 NC_010634.1 Protein Homology CDS 4117163 4117360 . + 0 ID=cds3613;Parent=gene3713;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NC_010634.1 RefSeq gene 4117357 4117749 . - . ID=gene3714;Name=YPTS_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18630;old_locus_tag=YPTS_3692 NC_010634.1 Protein Homology CDS 4117357 4117749 . - 0 ID=cds3614;Parent=gene3714;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NC_010634.1 RefSeq gene 4117764 4118192 . - . ID=gene3715;Name=YPTS_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18635;old_locus_tag=YPTS_3693 NC_010634.1 Protein Homology CDS 4117764 4118192 . - 0 ID=cds3615;Parent=gene3715;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NC_010634.1 RefSeq gene 4118506 4119633 . - . ID=gene3716;Name=YPTS_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18640;old_locus_tag=YPTS_3694 NC_010634.1 Protein Homology CDS 4118506 4119633 . - 0 ID=cds3616;Parent=gene3716;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11 NC_010634.1 RefSeq gene 4119857 4120261 . + . ID=gene3717;Name=YPTS_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18645;old_locus_tag=YPTS_3696 NC_010634.1 Protein Homology CDS 4119857 4120261 . + 0 ID=cds3617;Parent=gene3717;Dbxref=Genbank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210130.1;transl_table=11 NC_010634.1 RefSeq gene 4120532 4121905 . + . ID=gene3718;Name=YPTS_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18650;old_locus_tag=YPTS_3697 NC_010634.1 Protein Homology CDS 4120532 4121905 . + 0 ID=cds3618;Parent=gene3718;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11 NC_010634.1 RefSeq gene 4121995 4123083 . + . ID=gene3719;Name=YPTS_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18655;old_locus_tag=YPTS_3698 NC_010634.1 Protein Homology CDS 4121995 4123083 . + 0 ID=cds3619;Parent=gene3719;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11 NC_010634.1 RefSeq gene 4123264 4124526 . - . ID=gene3720;Name=YPTS_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18660;old_locus_tag=YPTS_3699 NC_010634.1 Protein Homology CDS 4123264 4124526 . - 0 ID=cds3620;Parent=gene3720;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NC_010634.1 RefSeq gene 4124680 4124934 . - . ID=gene3721;Name=YPTS_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18665;old_locus_tag=YPTS_3700 NC_010634.1 Protein Homology CDS 4124680 4124934 . - 0 ID=cds3621;Parent=gene3721;Dbxref=Genbank:WP_012104414.1;Name=WP_012104414.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104414.1;transl_table=11 NC_010634.1 RefSeq gene 4125081 4125383 . - . ID=gene3722;Name=YPTS_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18670;old_locus_tag=YPTS_3701 NC_010634.1 Protein Homology CDS 4125081 4125383 . - 0 ID=cds3622;Parent=gene3722;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11 NC_010634.1 RefSeq gene 4125419 4126042 . - . ID=gene3723;Name=YPTS_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18675;old_locus_tag=YPTS_3702 NC_010634.1 Protein Homology CDS 4125419 4126042 . - 0 ID=cds3623;Parent=gene3723;Dbxref=Genbank:WP_002210124.1;Name=WP_002210124.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter substrate-binding protein;protein_id=WP_002210124.1;transl_table=11 NC_010634.1 RefSeq gene 4126055 4126612 . - . ID=gene3724;Name=YPTS_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18680;old_locus_tag=YPTS_3703 NC_010634.1 Protein Homology CDS 4126055 4126612 . - 0 ID=cds3624;Parent=gene3724;Dbxref=Genbank:WP_012414052.1;Name=WP_012414052.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_012414052.1;transl_table=11 NC_010634.1 RefSeq gene 4126617 4127399 . - . ID=gene3725;Name=YPTS_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18685;old_locus_tag=YPTS_3704 NC_010634.1 Protein Homology CDS 4126617 4127399 . - 0 ID=cds3625;Parent=gene3725;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11 NC_010634.1 RefSeq gene 4127617 4128435 . - . ID=gene3726;Name=YPTS_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18690;old_locus_tag=YPTS_3705 NC_010634.1 Protein Homology CDS 4127617 4128435 . - 0 ID=cds3626;Parent=gene3726;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11 NC_010634.1 RefSeq gene 4128700 4129674 . + . ID=gene3727;Name=YPTS_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18695;old_locus_tag=YPTS_3706 NC_010634.1 Protein Homology CDS 4128700 4129674 . + 0 ID=cds3627;Parent=gene3727;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11 NC_010634.1 RefSeq gene 4129785 4130771 . + . ID=gene3728;Name=YPTS_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18700;old_locus_tag=YPTS_3707 NC_010634.1 Protein Homology CDS 4129785 4130771 . + 0 ID=cds3628;Parent=gene3728;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4130877 4131007 . + . ID=id281;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 4131017 4131147 . + . ID=id282;gbkey=repeat_region NC_010634.1 RefSeq gene 4131181 4131744 . + . ID=gene3729;Name=YPTS_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18705;old_locus_tag=YPTS_3708 NC_010634.1 Protein Homology CDS 4131181 4131744 . + 0 ID=cds3629;Parent=gene3729;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NC_010634.1 RefSeq gene 4131741 4132304 . + . ID=gene3730;Name=YPTS_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18710;old_locus_tag=YPTS_3709 NC_010634.1 Protein Homology CDS 4131741 4132304 . + 0 ID=cds3630;Parent=gene3730;Dbxref=Genbank:WP_011193147.1;Name=WP_011193147.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011193147.1;transl_table=11 NC_010634.1 RefSeq gene 4132288 4132833 . + . ID=gene3731;Name=YPTS_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18715;old_locus_tag=YPTS_3710 NC_010634.1 Protein Homology CDS 4132288 4132833 . + 0 ID=cds3631;Parent=gene3731;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11 NC_010634.1 RefSeq gene 4132840 4133565 . + . ID=gene3732;Name=YPTS_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18720;old_locus_tag=YPTS_3711 NC_010634.1 Protein Homology CDS 4132840 4133565 . + 0 ID=cds3632;Parent=gene3732;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NC_010634.1 RefSeq gene 4133627 4135060 . + . ID=gene3733;Name=YPTS_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18725;old_locus_tag=YPTS_3712 NC_010634.1 Protein Homology CDS 4133627 4135060 . + 0 ID=cds3633;Parent=gene3733;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11 NC_010634.1 RefSeq gene 4135084 4135371 . + . ID=gene3734;Name=YPTS_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18730;old_locus_tag=YPTS_3713 NC_010634.1 Protein Homology CDS 4135084 4135371 . + 0 ID=cds3634;Parent=gene3734;Dbxref=Genbank:WP_004392031.1;Name=WP_004392031.1;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=ribosome hibernation promoting factor HPF;protein_id=WP_004392031.1;transl_table=11 NC_010634.1 RefSeq gene 4135490 4135972 . + . ID=gene3735;Name=YPTS_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18735;old_locus_tag=YPTS_3714 NC_010634.1 Protein Homology CDS 4135490 4135972 . + 0 ID=cds3635;Parent=gene3735;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11 NC_010634.1 RefSeq gene 4136278 4137132 . + . ID=gene3736;Name=YPTS_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18740;old_locus_tag=YPTS_3715 NC_010634.1 Protein Homology CDS 4136278 4137132 . + 0 ID=cds3636;Parent=gene3736;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11 NC_010634.1 RefSeq gene 4137129 4137401 . + . ID=gene3737;Name=YPTS_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18745;old_locus_tag=YPTS_3716 NC_010634.1 Protein Homology CDS 4137129 4137401 . + 0 ID=cds3637;Parent=gene3737;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11 NC_010634.1 RefSeq gene 4137740 4138675 . + . ID=gene3738;Name=YPTS_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18750;old_locus_tag=YPTS_3717 NC_010634.1 Protein Homology CDS 4137740 4138675 . + 0 ID=cds3638;Parent=gene3738;Dbxref=Genbank:WP_011193148.1;Name=WP_011193148.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_011193148.1;transl_table=11 NC_010634.1 RefSeq gene 4138687 4139151 . + . ID=gene3739;Name=YPTS_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18755;old_locus_tag=YPTS_3718 NC_010634.1 Protein Homology CDS 4138687 4139151 . + 0 ID=cds3639;Parent=gene3739;Dbxref=Genbank:WP_012104412.1;Name=WP_012104412.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_012104412.1;transl_table=11 NC_010634.1 RefSeq gene 4139289 4139675 . + . ID=gene3740;Name=YPTS_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18760;old_locus_tag=YPTS_3719 NC_010634.1 Protein Homology CDS 4139289 4139675 . + 0 ID=cds3640;Parent=gene3740;Dbxref=Genbank:WP_011193150.1;Name=WP_011193150.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_011193150.1;transl_table=11 NC_010634.1 RefSeq gene 4139974 4140450 . + . ID=gene3741;Name=YPTS_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18765;old_locus_tag=YPTS_3720 NC_010634.1 Protein Homology CDS 4139974 4140450 . + 0 ID=cds3641;Parent=gene3741;Dbxref=Genbank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210107.1;transl_table=11 NC_010634.1 RefSeq gene 4140684 4141637 . + . ID=gene3742;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YPTS_RS18770;old_locus_tag=YPTS_3721 NC_010634.1 Protein Homology CDS 4140684 4141637 . + 0 ID=cds3642;Parent=gene3742;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11 NC_010634.1 RefSeq gene 4142048 4143463 . + . ID=gene3743;Name=YPTS_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18775;old_locus_tag=YPTS_3722 NC_010634.1 Protein Homology CDS 4142048 4143463 . + 0 ID=cds3643;Parent=gene3743;Dbxref=Genbank:WP_011193151.1;Name=WP_011193151.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_011193151.1;transl_table=11 NC_010634.1 RefSeq gene 4143558 4145225 . + . ID=gene3744;Name=YPTS_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18780;old_locus_tag=YPTS_3723 NC_010634.1 Protein Homology CDS 4143558 4145225 . + 0 ID=cds3644;Parent=gene3744;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11 NC_010634.1 RefSeq gene 4145578 4145988 . + . ID=gene3745;Name=YPTS_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18785;old_locus_tag=YPTS_3724 NC_010634.1 Protein Homology CDS 4145578 4145988 . + 0 ID=cds3645;Parent=gene3745;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NC_010634.1 RefSeq gene 4146250 4146636 . - . ID=gene3746;Name=YPTS_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18790;old_locus_tag=YPTS_3725 NC_010634.1 Protein Homology CDS 4146250 4146636 . - 0 ID=cds3646;Parent=gene3746;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11 NC_010634.1 RefSeq gene 4146844 4147488 . - . ID=gene3747;Name=YPTS_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18795;old_locus_tag=YPTS_3726 NC_010634.1 Protein Homology CDS 4146844 4147488 . - 0 ID=cds3647;Parent=gene3747;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NC_010634.1 RefSeq gene 4147612 4148952 . - . ID=gene3748;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YPTS_RS18800;old_locus_tag=YPTS_3727 NC_010634.1 Protein Homology CDS 4147612 4148952 . - 0 ID=cds3648;Parent=gene3748;Dbxref=Genbank:WP_011193152.1;Name=WP_011193152.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_011193152.1;transl_table=11 NC_010634.1 RefSeq gene 4149133 4149681 . + . ID=gene3749;Name=YPTS_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18805;old_locus_tag=YPTS_3728 NC_010634.1 Protein Homology CDS 4149133 4149681 . + 0 ID=cds3649;Parent=gene3749;Dbxref=Genbank:WP_011193153.1;Name=WP_011193153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193153.1;transl_table=11 NC_010634.1 RefSeq gene 4149809 4150090 . - . ID=gene3750;Name=YPTS_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18810;old_locus_tag=YPTS_3729 NC_010634.1 Protein Homology CDS 4149809 4150090 . - 0 ID=cds3650;Parent=gene3750;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11 NC_010634.1 RefSeq gene 4150095 4150568 . - . ID=gene3751;Name=YPTS_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18815;old_locus_tag=YPTS_3730 NC_010634.1 Protein Homology CDS 4150095 4150568 . - 0 ID=cds3651;Parent=gene3751;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11 NC_010634.1 RefSeq gene 4150763 4152232 . - . ID=gene3752;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YPTS_RS18820;old_locus_tag=YPTS_3731 NC_010634.1 Protein Homology CDS 4150763 4152232 . - 0 ID=cds3652;Parent=gene3752;Dbxref=Genbank:WP_012414053.1;Name=WP_012414053.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_012414053.1;transl_table=11 NC_010634.1 RefSeq gene 4152499 4154454 . - . ID=gene3753;Name=YPTS_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18825;old_locus_tag=YPTS_3732 NC_010634.1 Protein Homology CDS 4152499 4154454 . - 0 ID=cds3653;Parent=gene3753;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NC_010634.1 RefSeq gene 4154456 4155391 . - . ID=gene3754;Name=YPTS_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18830;old_locus_tag=YPTS_3733 NC_010634.1 Protein Homology CDS 4154456 4155391 . - 0 ID=cds3654;Parent=gene3754;Dbxref=Genbank:WP_002210094.1;Name=WP_002210094.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NC_010634.1 RefSeq gene 4155399 4155602 . - . ID=gene3755;Name=YPTS_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18835;old_locus_tag=YPTS_3734 NC_010634.1 Protein Homology CDS 4155399 4155602 . - 0 ID=cds3655;Parent=gene3755;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11 NC_010634.1 RefSeq gene 4155905 4156816 . + . ID=gene3756;Name=YPTS_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18840;old_locus_tag=YPTS_3735 NC_010634.1 Protein Homology CDS 4155905 4156816 . + 0 ID=cds3656;Parent=gene3756;Dbxref=Genbank:WP_012414054.1;Name=WP_012414054.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012414054.1;transl_table=11 NC_010634.1 RefSeq gene 4157077 4157943 . + . ID=gene3757;Name=YPTS_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18845;old_locus_tag=YPTS_3736 NC_010634.1 Protein Homology CDS 4157077 4157943 . + 0 ID=cds3657;Parent=gene3757;Dbxref=Genbank:WP_041175576.1;Name=WP_041175576.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_041175576.1;transl_table=11 NC_010634.1 RefSeq gene 4158179 4160671 . + . ID=gene3758;Name=YPTS_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18850;old_locus_tag=YPTS_3737 NC_010634.1 Protein Homology CDS 4158179 4160671 . + 0 ID=cds3658;Parent=gene3758;Dbxref=Genbank:WP_012414056.1;Name=WP_012414056.1;gbkey=CDS;product=toxin;protein_id=WP_012414056.1;transl_table=11 NC_010634.1 RefSeq gene 4162149 4164290 . + . ID=gene3759;Name=YPTS_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18855 NC_010634.1 Protein Homology CDS 4162149 4164290 . + 0 ID=cds3659;Parent=gene3759;Dbxref=Genbank:WP_032466884.1;Name=WP_032466884.1;gbkey=CDS;product=toxin subunit;protein_id=WP_032466884.1;transl_table=11 NC_010634.1 RefSeq gene 4164347 4168798 . + . ID=gene3760;Name=YPTS_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18860;old_locus_tag=YPTS_3739 NC_010634.1 Protein Homology CDS 4164347 4168798 . + 0 ID=cds3660;Parent=gene3760;Dbxref=Genbank:WP_012414058.1;Name=WP_012414058.1;gbkey=CDS;product=toxin;protein_id=WP_012414058.1;transl_table=11 NC_010634.1 RefSeq gene 4168938 4169240 . + . ID=gene3761;Name=YPTS_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18865;old_locus_tag=YPTS_3740 NC_010634.1 Protein Homology CDS 4168938 4169240 . + 0 ID=cds3661;Parent=gene3761;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11 NC_010634.1 RefSeq gene 4169253 4169654 . + . ID=gene3762;Name=YPTS_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18870;old_locus_tag=YPTS_3741 NC_010634.1 Protein Homology CDS 4169253 4169654 . + 0 ID=cds3662;Parent=gene3762;Dbxref=Genbank:WP_011193160.1;Name=WP_011193160.1;gbkey=CDS;product=peptidase M15;protein_id=WP_011193160.1;transl_table=11 NC_010634.1 RefSeq gene 4169651 4170010 . + . ID=gene3763;Name=YPTS_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18875;old_locus_tag=YPTS_3742 NC_010634.1 Protein Homology CDS 4169651 4170010 . + 0 ID=cds3663;Parent=gene3763;Dbxref=Genbank:WP_012414059.1;Name=WP_012414059.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414059.1;transl_table=11 NC_010634.1 RefSeq gene 4170270 4173128 . + . ID=gene3764;Name=YPTS_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18880;old_locus_tag=YPTS_3744 NC_010634.1 Protein Homology CDS 4170270 4173128 . + 0 ID=cds3664;Parent=gene3764;Dbxref=Genbank:WP_011193162.1;Name=WP_011193162.1;gbkey=CDS;product=toxin;protein_id=WP_011193162.1;transl_table=11 NC_010634.1 RefSeq gene 4173329 4174774 . - . ID=gene3765;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YPTS_RS18885;old_locus_tag=YPTS_3745 NC_010634.1 Protein Homology CDS 4173329 4174774 . - 0 ID=cds3665;Parent=gene3765;Dbxref=Genbank:WP_002210082.1;Name=WP_002210082.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_002210082.1;transl_table=11 NC_010634.1 RefSeq gene 4174786 4175655 . - . ID=gene3766;Name=YPTS_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18890;old_locus_tag=YPTS_3746 NC_010634.1 Protein Homology CDS 4174786 4175655 . - 0 ID=cds3666;Parent=gene3766;Dbxref=Genbank:WP_002210081.1;Name=WP_002210081.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_002210081.1;transl_table=11 NC_010634.1 RefSeq gene 4175652 4179554 . - . ID=gene3767;Name=YPTS_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18895;old_locus_tag=YPTS_3747 NC_010634.1 Protein Homology CDS 4175652 4179554 . - 0 ID=cds3667;Parent=gene3767;Dbxref=Genbank:WP_041175477.1;Name=WP_041175477.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175477.1;transl_table=11 NC_010634.1 RefSeq gene 4179669 4181138 . - . ID=gene3768;Name=YPTS_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18900;old_locus_tag=YPTS_3748 NC_010634.1 Protein Homology CDS 4179669 4181138 . - 0 ID=cds3668;Parent=gene3768;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NC_010634.1 RefSeq gene 4181128 4181721 . - . ID=gene3769;Name=YPTS_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18905;old_locus_tag=YPTS_3749 NC_010634.1 Protein Homology CDS 4181128 4181721 . - 0 ID=cds3669;Parent=gene3769;Dbxref=Genbank:WP_002210078.1;Name=WP_002210078.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210078.1;transl_table=11 NC_010634.1 RefSeq gene 4181735 4182223 . - . ID=gene3770;Name=YPTS_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18910;old_locus_tag=YPTS_3750 NC_010634.1 Protein Homology CDS 4181735 4182223 . - 0 ID=cds3670;Parent=gene3770;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NC_010634.1 RefSeq gene 4182220 4183215 . - . ID=gene3771;Name=YPTS_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18915;old_locus_tag=YPTS_3751 NC_010634.1 Protein Homology CDS 4182220 4183215 . - 0 ID=cds3671;Parent=gene3771;Dbxref=Genbank:WP_002210076.1;Name=WP_002210076.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NC_010634.1 RefSeq gene 4183420 4184463 . - . ID=gene3772;Name=YPTS_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18920;old_locus_tag=YPTS_3752 NC_010634.1 Protein Homology CDS 4183420 4184463 . - 0 ID=cds3672;Parent=gene3772;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NC_010634.1 RefSeq gene 4184800 4186716 . - . ID=gene3773;Name=YPTS_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18925;old_locus_tag=YPTS_3753 NC_010634.1 Protein Homology CDS 4184800 4186716 . - 0 ID=cds3673;Parent=gene3773;Dbxref=Genbank:WP_011193164.1;Name=WP_011193164.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193164.1;transl_table=11 NC_010634.1 RefSeq gene 4187117 4188094 . + . ID=gene3774;Name=YPTS_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18930;old_locus_tag=YPTS_3754 NC_010634.1 Protein Homology CDS 4187117 4188094 . + 0 ID=cds3674;Parent=gene3774;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11 NC_010634.1 RefSeq gene 4188317 4189417 . + . ID=gene3775;Name=YPTS_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18935;old_locus_tag=YPTS_3755 NC_010634.1 Protein Homology CDS 4188317 4189417 . + 0 ID=cds3675;Parent=gene3775;Dbxref=Genbank:WP_011193165.1;Name=WP_011193165.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfoxide reductase catalytic subunit YedY;protein_id=WP_011193165.1;transl_table=11 NC_010634.1 RefSeq gene 4189417 4190037 . + . ID=gene3776;Name=YPTS_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18940;old_locus_tag=YPTS_3756 NC_010634.1 Protein Homology CDS 4189417 4190037 . + 0 ID=cds3676;Parent=gene3776;Dbxref=Genbank:WP_002210072.1;Name=WP_002210072.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_002210072.1;transl_table=11 NC_010634.1 RefSeq gene 4190299 4190751 . + . ID=gene3777;Name=YPTS_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18945;old_locus_tag=YPTS_3757 NC_010634.1 Protein Homology CDS 4190299 4190751 . + 0 ID=cds3677;Parent=gene3777;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NC_010634.1 RefSeq gene 4190909 4191373 . + . ID=gene3778;Name=YPTS_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18950;old_locus_tag=YPTS_3758 NC_010634.1 Protein Homology CDS 4190909 4191373 . + 0 ID=cds3678;Parent=gene3778;Dbxref=Genbank:WP_002230506.1;Name=WP_002230506.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_002230506.1;transl_table=11 NC_010634.1 RefSeq gene 4191385 4192734 . + . ID=gene3779;Name=YPTS_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18955;old_locus_tag=YPTS_3759 NC_010634.1 Protein Homology CDS 4191385 4192734 . + 0 ID=cds3679;Parent=gene3779;Dbxref=Genbank:WP_002210069.1;Name=WP_002210069.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002210069.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4193777 4194201 . + . ID=id283;gbkey=repeat_region NC_010634.1 RefSeq gene 4194216 4194458 . + . ID=gene3780;Name=YPTS_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18960;old_locus_tag=YPTS_3761 NC_010634.1 Protein Homology CDS 4194216 4194458 . + 0 ID=cds3680;Parent=gene3780;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11 NC_010634.1 RefSeq gene 4194448 4195902 . + . ID=gene3781;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YPTS_RS18965;old_locus_tag=YPTS_3762 NC_010634.1 Protein Homology CDS 4194448 4195902 . + 0 ID=cds3681;Parent=gene3781;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NC_010634.1 RefSeq gene 4195978 4196859 . + . ID=gene3782;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YPTS_RS18970;old_locus_tag=YPTS_3763 NC_010634.1 Protein Homology CDS 4195978 4196859 . + 0 ID=cds3682;Parent=gene3782;Dbxref=Genbank:WP_011193166.1;Name=WP_011193166.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_011193166.1;transl_table=11 NC_010634.1 RefSeq gene 4197448 4198413 . + . ID=gene3783;Name=YPTS_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18975;old_locus_tag=YPTS_3764 NC_010634.1 Protein Homology CDS 4197448 4198413 . + 0 ID=cds3683;Parent=gene3783;Dbxref=Genbank:WP_002210062.1;Name=WP_002210062.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_002210062.1;transl_table=11 NC_010634.1 RefSeq gene 4198438 4198734 . + . ID=gene3784;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YPTS_RS18980;old_locus_tag=YPTS_3765 NC_010634.1 Protein Homology CDS 4198438 4198734 . + 0 ID=cds3684;Parent=gene3784;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4198963 4199328 . + . ID=id284;gbkey=repeat_region NC_010634.1 RefSeq gene 4199488 4199964 . - . ID=gene3785;Name=YPTS_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18985;old_locus_tag=YPTS_3766 NC_010634.1 Protein Homology CDS 4199488 4199964 . - 0 ID=cds3685;Parent=gene3785;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11 NC_010634.1 RefSeq gene 4200030 4200704 . - . ID=gene3786;Name=YPTS_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18990;old_locus_tag=YPTS_3767 NC_010634.1 Protein Homology CDS 4200030 4200704 . - 0 ID=cds3686;Parent=gene3786;Dbxref=Genbank:WP_011193167.1;Name=WP_011193167.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_011193167.1;transl_table=11 NC_010634.1 RefSeq gene 4200794 4202158 . - . ID=gene3787;Name=YPTS_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS18995;old_locus_tag=YPTS_3768 NC_010634.1 Protein Homology CDS 4200794 4202158 . - 0 ID=cds3687;Parent=gene3787;Dbxref=Genbank:WP_011193168.1;Name=WP_011193168.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011193168.1;transl_table=11 NC_010634.1 RefSeq gene 4202312 4202707 . - . ID=gene3788;Name=YPTS_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19000;old_locus_tag=YPTS_3769 NC_010634.1 Protein Homology CDS 4202312 4202707 . - 0 ID=cds3688;Parent=gene3788;Dbxref=Genbank:WP_011193169.1;Name=WP_011193169.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_011193169.1;transl_table=11 NC_010634.1 RefSeq gene 4202912 4203802 . - . ID=gene3789;Name=YPTS_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19005;old_locus_tag=YPTS_3770 NC_010634.1 Protein Homology CDS 4202912 4203802 . - 0 ID=cds3689;Parent=gene3789;Dbxref=Genbank:WP_011193170.1;Name=WP_011193170.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_011193170.1;transl_table=11 NC_010634.1 RefSeq gene 4203867 4204679 . - . ID=gene3790;Name=YPTS_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19010;old_locus_tag=YPTS_3771 NC_010634.1 Protein Homology CDS 4203867 4204679 . - 0 ID=cds3690;Parent=gene3790;Dbxref=Genbank:WP_011193171.1;Name=WP_011193171.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_011193171.1;transl_table=11 NC_010634.1 RefSeq gene 4205155 4205622 . + . ID=gene3791;Name=YPTS_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19015;old_locus_tag=YPTS_3772 NC_010634.1 Protein Homology CDS 4205155 4205622 . + 0 ID=cds3691;Parent=gene3791;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11 NC_010634.1 RefSeq gene 4205914 4206063 . + . ID=gene3792;Name=YPTS_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19020;old_locus_tag=YPTS_3773 NC_010634.1 Protein Homology CDS 4205914 4206063 . + 0 ID=cds3692;Parent=gene3792;Dbxref=Genbank:WP_002374696.1;Name=WP_002374696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002374696.1;transl_table=11 NC_010634.1 cmsearch region 4205977 4206406 . + . ID=id285;Note=cspA;gbkey=misc_feature NC_010634.1 RefSeq repeat_region 4206138 4207284 . + . ID=id286;gbkey=repeat_region NC_010634.1 RefSeq gene 4206156 4206368 . + . ID=gene3793;Name=YPTS_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19025;old_locus_tag=YPTS_3774 NC_010634.1 Protein Homology CDS 4206156 4206368 . + 0 ID=cds3693;Parent=gene3793;Dbxref=Genbank:WP_011193172.1;Name=WP_011193172.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_011193172.1;transl_table=11 NC_010634.1 cmsearch region 4206454 4206891 . + . ID=id287;Note=cspA;gbkey=misc_feature NC_010634.1 RefSeq gene 4206628 4206840 . + . ID=gene3794;Name=YPTS_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19030;old_locus_tag=YPTS_3775 NC_010634.1 Protein Homology CDS 4206628 4206840 . + 0 ID=cds3694;Parent=gene3794;Dbxref=Genbank:WP_011193172.1;Name=WP_011193172.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_011193172.1;transl_table=11 NC_010634.1 cmsearch region 4206926 4207339 . + . ID=id288;Note=cspA;gbkey=misc_feature NC_010634.1 RefSeq gene 4207100 4207312 . + . ID=gene3795;Name=YPTS_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19035;old_locus_tag=YPTS_3776 NC_010634.1 Protein Homology CDS 4207100 4207312 . + 0 ID=cds3695;Parent=gene3795;Dbxref=Genbank:WP_011193173.1;Name=WP_011193173.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_011193173.1;transl_table=11 NC_010634.1 RefSeq gene 4207348 4207605 . + . ID=gene3796;Name=YPTS_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19040 NC_010634.1 GeneMarkS+ CDS 4207348 4207605 . + 0 ID=cds3696;Parent=gene3796;Dbxref=Genbank:WP_032466796.1;Name=WP_032466796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466796.1;transl_table=11 NC_010634.1 RefSeq gene 4207648 4208823 . + . ID=gene3797;Name=YPTS_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19045;old_locus_tag=YPTS_3777 NC_010634.1 Protein Homology CDS 4207648 4208823 . + 0 ID=cds3697;Parent=gene3797;Dbxref=Genbank:WP_012414061.1;Name=WP_012414061.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_012414061.1;transl_table=11 NC_010634.1 RefSeq gene 4208975 4210321 . - . ID=gene3798;Name=YPTS_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19050;old_locus_tag=YPTS_3779 NC_010634.1 Protein Homology CDS 4208975 4210321 . - 0 ID=cds3698;Parent=gene3798;Dbxref=Genbank:WP_011193175.1;Name=WP_011193175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193175.1;transl_table=11 NC_010634.1 RefSeq gene 4210575 4211426 . + . ID=gene3799;Name=YPTS_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19055;old_locus_tag=YPTS_3780 NC_010634.1 Protein Homology CDS 4210575 4211426 . + 0 ID=cds3699;Parent=gene3799;Dbxref=Genbank:WP_032466981.1;Name=WP_032466981.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_032466981.1;transl_table=11 NC_010634.1 RefSeq gene 4211525 4212130 . - . ID=gene3800;Name=YPTS_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19060;old_locus_tag=YPTS_3781 NC_010634.1 Protein Homology CDS 4211525 4212130 . - 0 ID=cds3700;Parent=gene3800;Dbxref=Genbank:WP_011193177.1;Name=WP_011193177.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_011193177.1;transl_table=11 NC_010634.1 RefSeq gene 4212127 4213764 . - . ID=gene3801;Name=YPTS_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19065;old_locus_tag=YPTS_3782 NC_010634.1 Protein Homology CDS 4212127 4213764 . - 0 ID=cds3701;Parent=gene3801;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11 NC_010634.1 RefSeq gene 4213783 4214736 . - . ID=gene3802;Name=YPTS_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19070;old_locus_tag=YPTS_3783 NC_010634.1 Protein Homology CDS 4213783 4214736 . - 0 ID=cds3702;Parent=gene3802;Dbxref=Genbank:WP_011193178.1;Name=WP_011193178.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_011193178.1;transl_table=11 NC_010634.1 RefSeq gene 4214738 4215727 . - . ID=gene3803;Name=YPTS_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19075;old_locus_tag=YPTS_3784 NC_010634.1 Protein Homology CDS 4214738 4215727 . - 0 ID=cds3703;Parent=gene3803;Dbxref=Genbank:WP_011193179.1;Name=WP_011193179.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011193179.1;transl_table=11 NC_010634.1 RefSeq gene 4215720 4217216 . - . ID=gene3804;Name=YPTS_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19080;old_locus_tag=YPTS_3785 NC_010634.1 Protein Homology CDS 4215720 4217216 . - 0 ID=cds3704;Parent=gene3804;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NC_010634.1 RefSeq gene 4217420 4218409 . - . ID=gene3805;Name=YPTS_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19085;old_locus_tag=YPTS_3786 NC_010634.1 Protein Homology CDS 4217420 4218409 . - 0 ID=cds3705;Parent=gene3805;Dbxref=Genbank:WP_002210043.1;Name=WP_002210043.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210043.1;transl_table=11 NC_010634.1 RefSeq gene 4219216 4220136 . + . ID=gene3806;Name=YPTS_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19090;old_locus_tag=YPTS_3787 NC_010634.1 Protein Homology CDS 4219216 4220136 . + 0 ID=cds3706;Parent=gene3806;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11 NC_010634.1 RefSeq gene 4220288 4221475 . + . ID=gene3807;Name=YPTS_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19095;old_locus_tag=YPTS_3788 NC_010634.1 Protein Homology CDS 4220288 4221475 . + 0 ID=cds3707;Parent=gene3807;Dbxref=Genbank:WP_011193180.1;Name=WP_011193180.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193180.1;transl_table=11 NC_010634.1 RefSeq gene 4221696 4223345 . - . ID=gene3808;Name=YPTS_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19100;old_locus_tag=YPTS_3789 NC_010634.1 Protein Homology CDS 4221696 4223345 . - 0 ID=cds3708;Parent=gene3808;Dbxref=Genbank:WP_002215816.1;Name=WP_002215816.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002215816.1;transl_table=11 NC_010634.1 RefSeq gene 4223726 4225081 . - . ID=gene3809;Name=YPTS_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19105;old_locus_tag=YPTS_3790 NC_010634.1 Protein Homology CDS 4223726 4225081 . - 0 ID=cds3709;Parent=gene3809;Dbxref=Genbank:WP_011193181.1;Name=WP_011193181.1;gbkey=CDS;product=permease;protein_id=WP_011193181.1;transl_table=11 NC_010634.1 RefSeq gene 4225536 4225739 . + . ID=gene3810;Name=YPTS_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19110;old_locus_tag=YPTS_3791 NC_010634.1 Protein Homology CDS 4225536 4225739 . + 0 ID=cds3710;Parent=gene3810;Dbxref=Genbank:WP_002210038.1;Name=WP_002210038.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_002210038.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4225817 4225984 . + . ID=id289;gbkey=repeat_region NC_010634.1 RefSeq gene 4226358 4227173 . - . ID=gene3811;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YPTS_RS19115;old_locus_tag=YPTS_3792 NC_010634.1 Protein Homology CDS 4226358 4227173 . - 0 ID=cds3711;Parent=gene3811;Dbxref=Genbank:WP_011193182.1;Name=WP_011193182.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_011193182.1;transl_table=11 NC_010634.1 RefSeq gene 4227170 4227964 . - . ID=gene3812;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YPTS_RS19120;old_locus_tag=YPTS_3793 NC_010634.1 Protein Homology CDS 4227170 4227964 . - 0 ID=cds3712;Parent=gene3812;Dbxref=Genbank:WP_012414062.1;Name=WP_012414062.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_012414062.1;transl_table=11 NC_010634.1 RefSeq gene 4227976 4229124 . - . ID=gene3813;Name=YPTS_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19125;old_locus_tag=YPTS_3794 NC_010634.1 Protein Homology CDS 4227976 4229124 . - 0 ID=cds3713;Parent=gene3813;Dbxref=Genbank:WP_011193183.1;Name=WP_011193183.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_011193183.1;transl_table=11 NC_010634.1 RefSeq gene 4229143 4230249 . - . ID=gene3814;Name=YPTS_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19130;old_locus_tag=YPTS_3795 NC_010634.1 Protein Homology CDS 4229143 4230249 . - 0 ID=cds3714;Parent=gene3814;Dbxref=Genbank:WP_011193184.1;Name=WP_011193184.1;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_011193184.1;transl_table=11 NC_010634.1 RefSeq gene 4230264 4230845 . - . ID=gene3815;Name=YPTS_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19135;old_locus_tag=YPTS_3796 NC_010634.1 Protein Homology CDS 4230264 4230845 . - 0 ID=cds3715;Parent=gene3815;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11 NC_010634.1 RefSeq gene 4231316 4232017 . + . ID=gene3816;Name=YPTS_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19140;old_locus_tag=YPTS_3797 NC_010634.1 Protein Homology CDS 4231316 4232017 . + 0 ID=cds3716;Parent=gene3816;Dbxref=Genbank:WP_011193185.1;Name=WP_011193185.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_011193185.1;transl_table=11 NC_010634.1 RefSeq gene 4232198 4233127 . + . ID=gene3817;Name=YPTS_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19145;old_locus_tag=YPTS_3798 NC_010634.1 Protein Homology CDS 4232198 4233127 . + 0 ID=cds3717;Parent=gene3817;Dbxref=Genbank:WP_011193186.1;Name=WP_011193186.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_011193186.1;transl_table=11 NC_010634.1 RefSeq gene 4233133 4233636 . + . ID=gene3818;Name=YPTS_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19150;old_locus_tag=YPTS_3799 NC_010634.1 Protein Homology CDS 4233133 4233636 . + 0 ID=cds3718;Parent=gene3818;Dbxref=Genbank:WP_011193187.1;Name=WP_011193187.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_011193187.1;transl_table=11 NC_010634.1 RefSeq gene 4233796 4234662 . - . ID=gene3819;Name=YPTS_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19155;old_locus_tag=YPTS_3800 NC_010634.1 Protein Homology CDS 4233796 4234662 . - 0 ID=cds3719;Parent=gene3819;Dbxref=Genbank:WP_012414063.1;Name=WP_012414063.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_012414063.1;transl_table=11 NC_010634.1 RefSeq gene 4234932 4236062 . + . ID=gene3820;Name=YPTS_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19160;old_locus_tag=YPTS_3801 NC_010634.1 Protein Homology CDS 4234932 4236062 . + 0 ID=cds3720;Parent=gene3820;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11 NC_010634.1 RefSeq gene 4236059 4236958 . + . ID=gene3821;Name=YPTS_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19165;old_locus_tag=YPTS_3802 NC_010634.1 Protein Homology CDS 4236059 4236958 . + 0 ID=cds3721;Parent=gene3821;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11 NC_010634.1 RefSeq gene 4236977 4237243 . + . ID=gene3822;Name=YPTS_RS19170;end_range=4237243,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS19170;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 4236977 4237243 . + 0 ID=cds3722;Parent=gene3822;end_range=4237243,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4237235 4237468 . - . ID=gene3823;Name=YPTS_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19175;old_locus_tag=YPTS_3803 NC_010634.1 Protein Homology CDS 4237235 4237468 . - 0 ID=cds3723;Parent=gene3823;Dbxref=Genbank:WP_012414064.1;Name=WP_012414064.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_012414064.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4237290 4237480 . + . ID=id290;gbkey=repeat_region NC_010634.1 RefSeq gene 4237669 4237932 . - . ID=gene3824;Name=YPTS_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19180;old_locus_tag=YPTS_3804 NC_010634.1 Protein Homology CDS 4237669 4237932 . - 0 ID=cds3724;Parent=gene3824;Dbxref=Genbank:WP_032466985.1;Name=WP_032466985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466985.1;transl_table=11 NC_010634.1 RefSeq gene 4237947 4242509 . - . ID=gene3825;Name=YPTS_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19185;old_locus_tag=YPTS_3805 NC_010634.1 Protein Homology CDS 4237947 4242509 . - 0 ID=cds3725;Parent=gene3825;Dbxref=Genbank:WP_012414065.1;Name=WP_012414065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414065.1;transl_table=11 NC_010634.1 RefSeq gene 4242554 4242976 . - . ID=gene3826;Name=YPTS_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19190;old_locus_tag=YPTS_3806 NC_010634.1 Protein Homology CDS 4242554 4242976 . - 0 ID=cds3726;Parent=gene3826;Dbxref=Genbank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213861.1;transl_table=11 NC_010634.1 RefSeq gene 4242979 4245177 . - . ID=gene3827;Name=YPTS_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19195;old_locus_tag=YPTS_3807 NC_010634.1 Protein Homology CDS 4242979 4245177 . - 0 ID=cds3727;Parent=gene3827;Dbxref=Genbank:WP_012414066.1;Name=WP_012414066.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_012414066.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4244021 4244211 . + . ID=id291;gbkey=repeat_region NC_010634.1 RefSeq gene 4245199 4246512 . - . ID=gene3828;Name=YPTS_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19200;old_locus_tag=YPTS_3808 NC_010634.1 Protein Homology CDS 4245199 4246512 . - 0 ID=cds3728;Parent=gene3828;Dbxref=Genbank:WP_012414067.1;Name=WP_012414067.1;gbkey=CDS;product=membrane protein;protein_id=WP_012414067.1;transl_table=11 NC_010634.1 RefSeq gene 4246637 4250170 . - . ID=gene3829;Name=YPTS_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19205;old_locus_tag=YPTS_3809 NC_010634.1 Protein Homology CDS 4246637 4250170 . - 0 ID=cds3729;Parent=gene3829;Dbxref=Genbank:WP_012414068.1;Name=WP_012414068.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_012414068.1;transl_table=11 NC_010634.1 RefSeq gene 4250202 4251590 . - . ID=gene3830;Name=YPTS_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19210;old_locus_tag=YPTS_3810 NC_010634.1 Protein Homology CDS 4250202 4251590 . - 0 ID=cds3730;Parent=gene3830;Dbxref=Genbank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212110.1;transl_table=11 NC_010634.1 RefSeq gene 4251596 4252282 . - . ID=gene3831;Name=YPTS_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19215;old_locus_tag=YPTS_3811 NC_010634.1 Protein Homology CDS 4251596 4252282 . - 0 ID=cds3731;Parent=gene3831;Dbxref=Genbank:WP_011193199.1;Name=WP_011193199.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011193199.1;transl_table=11 NC_010634.1 RefSeq gene 4252279 4253076 . - . ID=gene3832;Name=YPTS_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19220;old_locus_tag=YPTS_3812 NC_010634.1 Protein Homology CDS 4252279 4253076 . - 0 ID=cds3732;Parent=gene3832;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11 NC_010634.1 RefSeq gene 4253073 4255676 . - . ID=gene3833;Name=YPTS_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19225;old_locus_tag=YPTS_3813 NC_010634.1 Protein Homology CDS 4253073 4255676 . - 0 ID=cds3733;Parent=gene3833;Dbxref=Genbank:WP_002212107.1;Name=WP_002212107.1;gbkey=CDS;product=ATP-dependent Clp protease ClpV;protein_id=WP_002212107.1;transl_table=11 NC_010634.1 RefSeq gene 4255687 4256439 . - . ID=gene3834;Name=YPTS_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19230;old_locus_tag=YPTS_3814 NC_010634.1 Protein Homology CDS 4255687 4256439 . - 0 ID=cds3734;Parent=gene3834;Dbxref=Genbank:WP_002355154.1;Name=WP_002355154.1;gbkey=CDS;product=chemotaxis protein MotB;protein_id=WP_002355154.1;transl_table=11 NC_010634.1 RefSeq gene 4256454 4257800 . - . ID=gene3835;Name=YPTS_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19235;old_locus_tag=YPTS_3815 NC_010634.1 Protein Homology CDS 4256454 4257800 . - 0 ID=cds3735;Parent=gene3835;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11 NC_010634.1 RefSeq gene 4257803 4258348 . - . ID=gene3836;Name=YPTS_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19240;old_locus_tag=YPTS_3816 NC_010634.1 Protein Homology CDS 4257803 4258348 . - 0 ID=cds3736;Parent=gene3836;Dbxref=Genbank:WP_002212104.1;Name=WP_002212104.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212104.1;transl_table=11 NC_010634.1 RefSeq gene 4258348 4259664 . - . ID=gene3837;Name=YPTS_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19245;old_locus_tag=YPTS_3817 NC_010634.1 Protein Homology CDS 4258348 4259664 . - 0 ID=cds3737;Parent=gene3837;Dbxref=Genbank:WP_011193200.1;Name=WP_011193200.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193200.1;transl_table=11 NC_010634.1 RefSeq gene 4259790 4260878 . - . ID=gene3838;Name=YPTS_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19250;old_locus_tag=YPTS_3818 NC_010634.1 Protein Homology CDS 4259790 4260878 . - 0 ID=cds3738;Parent=gene3838;Dbxref=Genbank:WP_002213885.1;Name=WP_002213885.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002213885.1;transl_table=11 NC_010634.1 RefSeq gene 4260842 4262662 . - . ID=gene3839;Name=YPTS_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19255;old_locus_tag=YPTS_3819 NC_010634.1 Protein Homology CDS 4260842 4262662 . - 0 ID=cds3739;Parent=gene3839;Dbxref=Genbank:WP_011193201.1;Name=WP_011193201.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011193201.1;transl_table=11 NC_010634.1 RefSeq gene 4262662 4263102 . - . ID=gene3840;Name=YPTS_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19260;old_locus_tag=YPTS_3820 NC_010634.1 Protein Homology CDS 4262662 4263102 . - 0 ID=cds3740;Parent=gene3840;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11 NC_010634.1 RefSeq gene 4263109 4264590 . - . ID=gene3841;Name=YPTS_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19265;old_locus_tag=YPTS_3821 NC_010634.1 Protein Homology CDS 4263109 4264590 . - 0 ID=cds3741;Parent=gene3841;Dbxref=Genbank:WP_002230616.1;Name=WP_002230616.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002230616.1;transl_table=11 NC_010634.1 RefSeq gene 4264658 4265155 . - . ID=gene3842;Name=YPTS_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19270;old_locus_tag=YPTS_3822 NC_010634.1 Protein Homology CDS 4264658 4265155 . - 0 ID=cds3742;Parent=gene3842;Dbxref=Genbank:WP_011193202.1;Name=WP_011193202.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011193202.1;transl_table=11 NC_010634.1 RefSeq gene 4265679 4266197 . + . ID=gene3843;Name=YPTS_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19275;old_locus_tag=YPTS_3823 NC_010634.1 Protein Homology CDS 4265679 4266197 . + 0 ID=cds3743;Parent=gene3843;Dbxref=Genbank:WP_011193203.1;Name=WP_011193203.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193203.1;transl_table=11 NC_010634.1 RefSeq gene 4266349 4266627 . - . ID=gene3844;Name=YPTS_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19280;old_locus_tag=YPTS_3825 NC_010634.1 Protein Homology CDS 4266349 4266627 . - 0 ID=cds3744;Parent=gene3844;Dbxref=Genbank:WP_011193204.1;Name=WP_011193204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193204.1;transl_table=11 NC_010634.1 RefSeq gene 4267099 4268010 . - . ID=gene3845;Name=YPTS_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19285;old_locus_tag=YPTS_3826 NC_010634.1 Protein Homology CDS 4267099 4268010 . - 0 ID=cds3745;Parent=gene3845;Dbxref=Genbank:WP_011193205.1;Name=WP_011193205.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_011193205.1;transl_table=11 NC_010634.1 RefSeq gene 4268251 4269522 . - . ID=gene3846;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=YPTS_RS19290;old_locus_tag=YPTS_3827 NC_010634.1 Protein Homology CDS 4268251 4269522 . - 0 ID=cds3746;Parent=gene3846;Dbxref=Genbank:WP_002212092.1;Name=WP_002212092.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NC_010634.1 RefSeq gene 4269593 4270702 . - . ID=gene3847;Name=YPTS_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19295;old_locus_tag=YPTS_3828 NC_010634.1 Protein Homology CDS 4269593 4270702 . - 0 ID=cds3747;Parent=gene3847;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NC_010634.1 RefSeq gene 4270706 4270942 . - . ID=gene3848;Name=YPTS_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19300 NC_010634.1 Protein Homology CDS 4270706 4270942 . - 0 ID=cds3748;Parent=gene3848;Dbxref=Genbank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11 NC_010634.1 RefSeq gene 4271530 4272741 . + . ID=gene3849;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YPTS_RS19305;old_locus_tag=YPTS_3830 NC_010634.1 Protein Homology CDS 4271530 4272741 . + 0 ID=cds3749;Parent=gene3849;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11 NC_010634.1 RefSeq gene 4272928 4274505 . + . ID=gene3850;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YPTS_RS19310;old_locus_tag=YPTS_3831 NC_010634.1 Protein Homology CDS 4272928 4274505 . + 0 ID=cds3750;Parent=gene3850;Dbxref=Genbank:WP_011193206.1;Name=WP_011193206.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_011193206.1;transl_table=11 NC_010634.1 RefSeq gene 4274519 4275409 . + . ID=gene3851;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YPTS_RS19315;old_locus_tag=YPTS_3832 NC_010634.1 Protein Homology CDS 4274519 4275409 . + 0 ID=cds3751;Parent=gene3851;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11 NC_010634.1 RefSeq gene 4275552 4275959 . - . ID=gene3852;Name=YPTS_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19320;old_locus_tag=YPTS_3833 NC_010634.1 Protein Homology CDS 4275552 4275959 . - 0 ID=cds3752;Parent=gene3852;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11 NC_010634.1 RefSeq gene 4276094 4277740 . - . ID=gene3853;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YPTS_RS19325;old_locus_tag=YPTS_3835 NC_010634.1 Protein Homology CDS 4276094 4277740 . - 0 ID=cds3753;Parent=gene3853;Dbxref=Genbank:WP_002212085.1;Name=WP_002212085.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NC_010634.1 RefSeq gene 4278110 4279495 . + . ID=gene3854;Name=YPTS_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19330;old_locus_tag=YPTS_3836 NC_010634.1 Protein Homology CDS 4278110 4279495 . + 0 ID=cds3754;Parent=gene3854;Dbxref=Genbank:WP_011193207.1;Name=WP_011193207.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_011193207.1;transl_table=11 NC_010634.1 RefSeq gene 4280063 4281751 . + . ID=gene3855;Name=YPTS_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19335;old_locus_tag=YPTS_3837 NC_010634.1 Protein Homology CDS 4280063 4281751 . + 0 ID=cds3755;Parent=gene3855;Dbxref=Genbank:WP_032485879.1;Name=WP_032485879.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_032485879.1;transl_table=11 NC_010634.1 RefSeq gene 4281821 4286728 . + . ID=gene3856;Name=YPTS_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19340;old_locus_tag=YPTS_3838 NC_010634.1 Protein Homology CDS 4281821 4286728 . + 0 ID=cds3756;Parent=gene3856;Dbxref=Genbank:WP_012414070.1;Name=WP_012414070.1;gbkey=CDS;product=hemolysin;protein_id=WP_012414070.1;transl_table=11 NC_010634.1 RefSeq gene 4286824 4290519 . - . ID=gene3857;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YPTS_RS19345;old_locus_tag=YPTS_3839 NC_010634.1 Protein Homology CDS 4286824 4290519 . - 0 ID=cds3757;Parent=gene3857;Dbxref=Genbank:WP_012414071.1;Name=WP_012414071.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_012414071.1;transl_table=11 NC_010634.1 RefSeq gene 4290734 4291576 . + . ID=gene3858;Name=YPTS_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19350;old_locus_tag=YPTS_3840 NC_010634.1 Protein Homology CDS 4290734 4291576 . + 0 ID=cds3758;Parent=gene3858;Dbxref=Genbank:WP_002230619.1;Name=WP_002230619.1;Note=regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002230619.1;transl_table=11 NC_010634.1 RefSeq gene 4291696 4293423 . - . ID=gene3859;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YPTS_RS19355;old_locus_tag=YPTS_3841 NC_010634.1 Protein Homology CDS 4291696 4293423 . - 0 ID=cds3759;Parent=gene3859;Dbxref=Genbank:WP_011193210.1;Name=WP_011193210.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_011193210.1;transl_table=11 NC_010634.1 RefSeq gene 4293496 4294803 . - . ID=gene3860;Name=YPTS_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19360;old_locus_tag=YPTS_3842 NC_010634.1 Protein Homology CDS 4293496 4294803 . - 0 ID=cds3760;Parent=gene3860;Dbxref=Genbank:WP_011193211.1;Name=WP_011193211.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_011193211.1;transl_table=11 NC_010634.1 RefSeq gene 4294850 4296448 . - . ID=gene3861;Name=YPTS_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19365;old_locus_tag=YPTS_3843 NC_010634.1 Protein Homology CDS 4294850 4296448 . - 0 ID=cds3761;Parent=gene3861;Dbxref=Genbank:WP_011193212.1;Name=WP_011193212.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_011193212.1;transl_table=11 NC_010634.1 RefSeq gene 4296869 4297798 . - . ID=gene3862;Name=YPTS_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19370;old_locus_tag=YPTS_3844 NC_010634.1 Protein Homology CDS 4296869 4297798 . - 0 ID=cds3762;Parent=gene3862;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11 NC_010634.1 RefSeq gene 4297866 4298138 . + . ID=gene3863;Name=YPTS_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19375;old_locus_tag=YPTS_3845 NC_010634.1 Protein Homology CDS 4297866 4298138 . + 0 ID=cds3763;Parent=gene3863;Dbxref=Genbank:WP_012303443.1;Name=WP_012303443.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303443.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4298528 4298661 . + . ID=id292;gbkey=repeat_region NC_010634.1 RefSeq gene 4298538 4298653 . - . ID=gene3864;Name=YPTS_RS19380;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS19380;old_locus_tag=YPTS_R0103 NC_010634.1 cmsearch rRNA 4298538 4298653 . - . ID=rna92;Parent=gene3864;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 4298538 4298653 . - . ID=id293;Parent=rna92;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 4298694 4298769 . - . ID=gene3865;Name=YPTS_RS19385;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS19385;old_locus_tag=YPTS_R0056 NC_010634.1 tRNAscan-SE tRNA 4298694 4298769 . - . ID=rna93;Parent=gene3865;anticodon=(pos:complement(4298734..4298736));gbkey=tRNA;product=tRNA-Thr NC_010634.1 tRNAscan-SE exon 4298694 4298769 . - . ID=id294;Parent=rna93;anticodon=(pos:complement(4298734..4298736));gbkey=tRNA;product=tRNA-Thr NC_010634.1 RefSeq repeat_region 4298778 4304352 . + . ID=id295;gbkey=repeat_region NC_010634.1 RefSeq gene 4298785 4298900 . - . ID=gene3866;Name=YPTS_RS19390;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS19390;old_locus_tag=YPTS_R0104 NC_010634.1 cmsearch rRNA 4298785 4298900 . - . ID=rna94;Parent=gene3866;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 4298785 4298900 . - . ID=id296;Parent=rna94;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 4298992 4301925 . - . ID=gene3867;Name=YPTS_RS19395;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS19395;old_locus_tag=YPTS_R0096 NC_010634.1 RefSeq rRNA 4298992 4301925 . - . ID=rna95;Parent=gene3867;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq exon 4298992 4301925 . - . ID=id297;Parent=rna95;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq gene 4302135 4302210 . - . ID=gene3868;Name=YPTS_RS19400;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS19400;old_locus_tag=YPTS_R0055 NC_010634.1 tRNAscan-SE tRNA 4302135 4302210 . - . ID=rna96;Parent=gene3868;anticodon=(pos:complement(4302175..4302177));gbkey=tRNA;product=tRNA-Ala NC_010634.1 tRNAscan-SE exon 4302135 4302210 . - . ID=id298;Parent=rna96;anticodon=(pos:complement(4302175..4302177));gbkey=tRNA;product=tRNA-Ala NC_010634.1 RefSeq gene 4302262 4302338 . - . ID=gene3869;Name=YPTS_RS19405;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS19405;old_locus_tag=YPTS_R0054 NC_010634.1 tRNAscan-SE tRNA 4302262 4302338 . - . ID=rna97;Parent=gene3869;anticodon=(pos:complement(4302302..4302304));gbkey=tRNA;product=tRNA-Ile NC_010634.1 tRNAscan-SE exon 4302262 4302338 . - . ID=id299;Parent=rna97;anticodon=(pos:complement(4302302..4302304));gbkey=tRNA;product=tRNA-Ile NC_010634.1 RefSeq gene 4302438 4303986 . - . ID=gene3870;Name=YPTS_RS19410;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS19410;old_locus_tag=YPTS_R0090 NC_010634.1 RefSeq rRNA 4302438 4303986 . - . ID=rna98;Parent=gene3870;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq exon 4302438 4303986 . - . ID=id300;Parent=rna98;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq gene 4304535 4305077 . + . ID=gene3871;Name=YPTS_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19420;old_locus_tag=YPTS_3851 NC_010634.1 Protein Homology CDS 4304535 4305077 . + 0 ID=cds3764;Parent=gene3871;Dbxref=Genbank:WP_011193213.1;Name=WP_011193213.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_011193213.1;transl_table=11 NC_010634.1 RefSeq gene 4305132 4305953 . - . ID=gene3872;Name=YPTS_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19425;old_locus_tag=YPTS_3852 NC_010634.1 Protein Homology CDS 4305132 4305953 . - 0 ID=cds3765;Parent=gene3872;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11 NC_010634.1 RefSeq gene 4305962 4306534 . - . ID=gene3873;Name=YPTS_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19430;old_locus_tag=YPTS_3853 NC_010634.1 Protein Homology CDS 4305962 4306534 . - 0 ID=cds3766;Parent=gene3873;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11 NC_010634.1 RefSeq gene 4306536 4307075 . - . ID=gene3874;Name=YPTS_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19435;old_locus_tag=YPTS_3854 NC_010634.1 Protein Homology CDS 4306536 4307075 . - 0 ID=cds3767;Parent=gene3874;Dbxref=Genbank:WP_012105865.1;Name=WP_012105865.1;gbkey=CDS;product=DNA topoisomerase;protein_id=WP_012105865.1;transl_table=11 NC_010634.1 RefSeq gene 4307116 4307589 . - . ID=gene3875;Name=YPTS_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19440;old_locus_tag=YPTS_3855 NC_010634.1 Protein Homology CDS 4307116 4307589 . - 0 ID=cds3768;Parent=gene3875;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11 NC_010634.1 RefSeq gene 4307561 4308682 . - . ID=gene3876;Name=YPTS_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19445;old_locus_tag=YPTS_3856 NC_010634.1 Protein Homology CDS 4307561 4308682 . - 0 ID=cds3769;Parent=gene3876;Dbxref=Genbank:WP_011193215.1;Name=WP_011193215.1;gbkey=CDS;product=DNA processing protein DprA;protein_id=WP_011193215.1;transl_table=11 NC_010634.1 RefSeq gene 4308817 4309329 . + . ID=gene3877;Name=YPTS_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19450;old_locus_tag=YPTS_3857 NC_010634.1 Protein Homology CDS 4308817 4309329 . + 0 ID=cds3770;Parent=gene3877;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NC_010634.1 RefSeq gene 4309354 4310301 . + . ID=gene3878;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YPTS_RS19455;old_locus_tag=YPTS_3858 NC_010634.1 Protein Homology CDS 4309354 4310301 . + 0 ID=cds3771;Parent=gene3878;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NC_010634.1 RefSeq gene 4310395 4311684 . + . ID=gene3879;Name=YPTS_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19460;old_locus_tag=YPTS_3859 NC_010634.1 Protein Homology CDS 4310395 4311684 . + 0 ID=cds3772;Parent=gene3879;Dbxref=Genbank:WP_002215705.1;Name=WP_002215705.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_002215705.1;transl_table=11 NC_010634.1 RefSeq gene 4311740 4313116 . + . ID=gene3880;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=YPTS_RS19465;old_locus_tag=YPTS_3860 NC_010634.1 Protein Homology CDS 4311740 4313116 . + 0 ID=cds3773;Parent=gene3880;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11 NC_010634.1 RefSeq gene 4313255 4313668 . + . ID=gene3881;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YPTS_RS19470;old_locus_tag=YPTS_3861 NC_010634.1 Protein Homology CDS 4313255 4313668 . + 0 ID=cds3774;Parent=gene3881;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11 NC_010634.1 RefSeq gene 4313778 4313978 . - . ID=gene3882;Name=YPTS_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19475;old_locus_tag=YPTS_3862 NC_010634.1 Protein Homology CDS 4313778 4313978 . - 0 ID=cds3775;Parent=gene3882;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11 NC_010634.1 RefSeq gene 4314066 4314491 . - . ID=gene3883;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YPTS_RS19480;old_locus_tag=YPTS_3863 NC_010634.1 Protein Homology CDS 4314066 4314491 . - 0 ID=cds3776;Parent=gene3883;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NC_010634.1 RefSeq gene 4314938 4315327 . - . ID=gene3884;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YPTS_RS19485;old_locus_tag=YPTS_3864 NC_010634.1 Protein Homology CDS 4314938 4315327 . - 0 ID=cds3777;Parent=gene3884;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NC_010634.1 RefSeq gene 4315368 4316357 . - . ID=gene3885;Name=YPTS_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19490;old_locus_tag=YPTS_3865 NC_010634.1 Protein Homology CDS 4315368 4316357 . - 0 ID=cds3778;Parent=gene3885;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NC_010634.1 RefSeq gene 4316383 4317003 . - . ID=gene3886;Name=YPTS_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19495;old_locus_tag=YPTS_3866 NC_010634.1 Protein Homology CDS 4316383 4317003 . - 0 ID=cds3779;Parent=gene3886;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NC_010634.1 RefSeq gene 4317034 4317423 . - . ID=gene3887;Name=YPTS_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19500;old_locus_tag=YPTS_3867 NC_010634.1 Protein Homology CDS 4317034 4317423 . - 0 ID=cds3780;Parent=gene3887;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NC_010634.1 RefSeq gene 4317440 4317796 . - . ID=gene3888;Name=YPTS_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19505;old_locus_tag=YPTS_3868 NC_010634.1 Protein Homology CDS 4317440 4317796 . - 0 ID=cds3781;Parent=gene3888;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NC_010634.1 RefSeq gene 4317944 4318060 . - . ID=gene3889;Name=YPTS_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19510;old_locus_tag=YPTS_3869 NC_010634.1 Protein Homology CDS 4317944 4318060 . - 0 ID=cds3782;Parent=gene3889;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NC_010634.1 RefSeq gene 4318094 4319425 . - . ID=gene3890;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=YPTS_RS19515;old_locus_tag=YPTS_3870 NC_010634.1 Protein Homology CDS 4318094 4319425 . - 0 ID=cds3783;Parent=gene3890;Dbxref=Genbank:WP_002213344.1;Name=WP_002213344.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NC_010634.1 RefSeq gene 4319433 4319867 . - . ID=gene3891;Name=YPTS_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19520;old_locus_tag=YPTS_3871 NC_010634.1 Protein Homology CDS 4319433 4319867 . - 0 ID=cds3784;Parent=gene3891;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NC_010634.1 RefSeq gene 4319871 4320050 . - . ID=gene3892;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YPTS_RS19525;old_locus_tag=YPTS_3872 NC_010634.1 Protein Homology CDS 4319871 4320050 . - 0 ID=cds3785;Parent=gene3892;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NC_010634.1 RefSeq gene 4320053 4320556 . - . ID=gene3893;Name=YPTS_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19530;old_locus_tag=YPTS_3873 NC_010634.1 Protein Homology CDS 4320053 4320556 . - 0 ID=cds3786;Parent=gene3893;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NC_010634.1 RefSeq gene 4320571 4320924 . - . ID=gene3894;Name=YPTS_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19535;old_locus_tag=YPTS_3874 NC_010634.1 Protein Homology CDS 4320571 4320924 . - 0 ID=cds3787;Parent=gene3894;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NC_010634.1 RefSeq gene 4320934 4321467 . - . ID=gene3895;Name=YPTS_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19540;old_locus_tag=YPTS_3875 NC_010634.1 Protein Homology CDS 4320934 4321467 . - 0 ID=cds3788;Parent=gene3895;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NC_010634.1 RefSeq gene 4321482 4321874 . - . ID=gene3896;Name=YPTS_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19545;old_locus_tag=YPTS_3876 NC_010634.1 Protein Homology CDS 4321482 4321874 . - 0 ID=cds3789;Parent=gene3896;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NC_010634.1 RefSeq gene 4321908 4322213 . - . ID=gene3897;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YPTS_RS19550;old_locus_tag=YPTS_3877 NC_010634.1 Protein Homology CDS 4321908 4322213 . - 0 ID=cds3790;Parent=gene3897;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NC_010634.1 RefSeq gene 4322227 4322766 . - . ID=gene3898;Name=YPTS_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19555;old_locus_tag=YPTS_3878 NC_010634.1 Protein Homology CDS 4322227 4322766 . - 0 ID=cds3791;Parent=gene3898;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NC_010634.1 RefSeq gene 4322781 4323095 . - . ID=gene3899;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YPTS_RS19560;old_locus_tag=YPTS_3879 NC_010634.1 Protein Homology CDS 4322781 4323095 . - 0 ID=cds3792;Parent=gene3899;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NC_010634.1 RefSeq gene 4323106 4323477 . - . ID=gene3900;Name=YPTS_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19565;old_locus_tag=YPTS_3880 NC_010634.1 Protein Homology CDS 4323106 4323477 . - 0 ID=cds3793;Parent=gene3900;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NC_010634.1 RefSeq gene 4323658 4323912 . - . ID=gene3901;Name=YPTS_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19570;old_locus_tag=YPTS_3881 NC_010634.1 Protein Homology CDS 4323658 4323912 . - 0 ID=cds3794;Parent=gene3901;Dbxref=Genbank:WP_002228135.1;Name=WP_002228135.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NC_010634.1 RefSeq gene 4323912 4324103 . - . ID=gene3902;Name=YPTS_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19575;old_locus_tag=YPTS_3882 NC_010634.1 Protein Homology CDS 4323912 4324103 . - 0 ID=cds3795;Parent=gene3902;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NC_010634.1 RefSeq gene 4324103 4324513 . - . ID=gene3903;Name=YPTS_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19580;old_locus_tag=YPTS_3883 NC_010634.1 Protein Homology CDS 4324103 4324513 . - 0 ID=cds3796;Parent=gene3903;Dbxref=Genbank:WP_002218940.1;Name=WP_002218940.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11 NC_010634.1 RefSeq gene 4324526 4325224 . - . ID=gene3904;Name=YPTS_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19585;old_locus_tag=YPTS_3884 NC_010634.1 Protein Homology CDS 4324526 4325224 . - 0 ID=cds3797;Parent=gene3904;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NC_010634.1 RefSeq gene 4325242 4325574 . - . ID=gene3905;Name=YPTS_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19590;old_locus_tag=YPTS_3885 NC_010634.1 Protein Homology CDS 4325242 4325574 . - 0 ID=cds3798;Parent=gene3905;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NC_010634.1 RefSeq gene 4325589 4325867 . - . ID=gene3906;Name=YPTS_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19595;old_locus_tag=YPTS_3886 NC_010634.1 Protein Homology CDS 4325589 4325867 . - 0 ID=cds3799;Parent=gene3906;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NC_010634.1 RefSeq gene 4325882 4326706 . - . ID=gene3907;Name=YPTS_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19600;old_locus_tag=YPTS_3887 NC_010634.1 Protein Homology CDS 4325882 4326706 . - 0 ID=cds3800;Parent=gene3907;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NC_010634.1 RefSeq gene 4326723 4327025 . - . ID=gene3908;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YPTS_RS19605;old_locus_tag=YPTS_3888 NC_010634.1 Protein Homology CDS 4326723 4327025 . - 0 ID=cds3801;Parent=gene3908;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NC_010634.1 RefSeq gene 4327022 4327627 . - . ID=gene3909;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YPTS_RS19610;old_locus_tag=YPTS_3889 NC_010634.1 Protein Homology CDS 4327022 4327627 . - 0 ID=cds3802;Parent=gene3909;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NC_010634.1 RefSeq gene 4327644 4328273 . - . ID=gene3910;Name=YPTS_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19615;old_locus_tag=YPTS_3890 NC_010634.1 Protein Homology CDS 4327644 4328273 . - 0 ID=cds3803;Parent=gene3910;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NC_010634.1 RefSeq gene 4328306 4328617 . - . ID=gene3911;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YPTS_RS19620;old_locus_tag=YPTS_3891 NC_010634.1 Protein Homology CDS 4328306 4328617 . - 0 ID=cds3804;Parent=gene3911;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NC_010634.1 RefSeq gene 4329015 4329488 . - . ID=gene3912;Name=YPTS_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19625;old_locus_tag=YPTS_3892 NC_010634.1 Protein Homology CDS 4329015 4329488 . - 0 ID=cds3805;Parent=gene3912;Dbxref=Genbank:WP_011193216.1;Name=WP_011193216.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_011193216.1;transl_table=11 NC_010634.1 RefSeq gene 4329567 4329761 . - . ID=gene3913;Name=YPTS_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19630;old_locus_tag=YPTS_3893 NC_010634.1 Protein Homology CDS 4329567 4329761 . - 0 ID=cds3806;Parent=gene3913;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NC_010634.1 RefSeq gene 4329900 4331084 . - . ID=gene3914;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPTS_RS19635;old_locus_tag=YPTS_3894 NC_010634.1 Protein Homology CDS 4329900 4331084 . - 0 ID=cds3807;Parent=gene3914;Dbxref=Genbank:WP_002212326.1;Name=WP_002212326.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NC_010634.1 RefSeq gene 4331156 4333264 . - . ID=gene3915;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YPTS_RS19640;old_locus_tag=YPTS_3895 NC_010634.1 Protein Homology CDS 4331156 4333264 . - 0 ID=cds3808;Parent=gene3915;Dbxref=Genbank:WP_002212325.1;Name=WP_002212325.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NC_010634.1 RefSeq gene 4333358 4333828 . - . ID=gene3916;Name=YPTS_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19645;old_locus_tag=YPTS_3896 NC_010634.1 Protein Homology CDS 4333358 4333828 . - 0 ID=cds3809;Parent=gene3916;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NC_010634.1 RefSeq gene 4333925 4334299 . - . ID=gene3917;Name=YPTS_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19650;old_locus_tag=YPTS_3897 NC_010634.1 Protein Homology CDS 4333925 4334299 . - 0 ID=cds3810;Parent=gene3917;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NC_010634.1 RefSeq gene 4334437 4334724 . - . ID=gene3918;Name=YPTS_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19655;old_locus_tag=YPTS_3898 NC_010634.1 Protein Homology CDS 4334437 4334724 . - 0 ID=cds3811;Parent=gene3918;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11 NC_010634.1 RefSeq gene 4334744 4335109 . - . ID=gene3919;Name=YPTS_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19660;old_locus_tag=YPTS_3899 NC_010634.1 Protein Homology CDS 4334744 4335109 . - 0 ID=cds3812;Parent=gene3919;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11 NC_010634.1 RefSeq gene 4335109 4335504 . - . ID=gene3920;Name=YPTS_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19665;old_locus_tag=YPTS_3900 NC_010634.1 Protein Homology CDS 4335109 4335504 . - 0 ID=cds3813;Parent=gene3920;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11 NC_010634.1 RefSeq gene 4335504 4336226 . - . ID=gene3921;Name=YPTS_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19670;old_locus_tag=YPTS_3901 NC_010634.1 Protein Homology CDS 4335504 4336226 . - 0 ID=cds3814;Parent=gene3921;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11 NC_010634.1 RefSeq gene 4336480 4337280 . - . ID=gene3922;Name=YPTS_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19675;old_locus_tag=YPTS_3902 NC_010634.1 Protein Homology CDS 4336480 4337280 . - 0 ID=cds3815;Parent=gene3922;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NC_010634.1 RefSeq gene 4337595 4337813 . + . ID=gene3923;Name=YPTS_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19680;old_locus_tag=YPTS_3903 NC_010634.1 Protein Homology CDS 4337595 4337813 . + 0 ID=cds3816;Parent=gene3923;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NC_010634.1 RefSeq gene 4338014 4338601 . - . ID=gene3924;Name=YPTS_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19685;old_locus_tag=YPTS_3904 NC_010634.1 Protein Homology CDS 4338014 4338601 . - 0 ID=cds3817;Parent=gene3924;Dbxref=Genbank:WP_002212316.1;Name=WP_002212316.1;Note=rotamase;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212316.1;transl_table=11 NC_010634.1 RefSeq gene 4338696 4338917 . - . ID=gene3925;Name=YPTS_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19690;old_locus_tag=YPTS_3905 NC_010634.1 Protein Homology CDS 4338696 4338917 . - 0 ID=cds3818;Parent=gene3925;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11 NC_010634.1 RefSeq gene 4338933 4340741 . - . ID=gene3926;Name=YPTS_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19695;old_locus_tag=YPTS_3906 NC_010634.1 Protein Homology CDS 4338933 4340741 . - 0 ID=cds3819;Parent=gene3926;Dbxref=Genbank:WP_012105869.1;Name=WP_012105869.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_012105869.1;transl_table=11 NC_010634.1 RefSeq gene 4340745 4341293 . - . ID=gene3927;Name=YPTS_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19700;old_locus_tag=YPTS_3907 NC_010634.1 Protein Homology CDS 4340745 4341293 . - 0 ID=cds3820;Parent=gene3927;Dbxref=Genbank:WP_002215966.1;Name=WP_002215966.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NC_010634.1 RefSeq gene 4341544 4343466 . + . ID=gene3928;Name=YPTS_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19705;old_locus_tag=YPTS_3908 NC_010634.1 Protein Homology CDS 4341544 4343466 . + 0 ID=cds3821;Parent=gene3928;Dbxref=Genbank:WP_002230378.1;Name=WP_002230378.1;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002230378.1;transl_table=11 NC_010634.1 RefSeq gene 4343601 4344590 . + . ID=gene3929;Name=YPTS_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19710;old_locus_tag=YPTS_3909 NC_010634.1 Protein Homology CDS 4343601 4344590 . + 0 ID=cds3822;Parent=gene3929;Dbxref=Genbank:WP_011193218.1;Name=WP_011193218.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_011193218.1;transl_table=11 NC_010634.1 RefSeq gene 4344683 4345663 . + . ID=gene3930;Name=YPTS_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19715;old_locus_tag=YPTS_3910 NC_010634.1 Protein Homology CDS 4344683 4345663 . + 0 ID=cds3823;Parent=gene3930;Dbxref=Genbank:WP_011193219.1;Name=WP_011193219.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_011193219.1;transl_table=11 NC_010634.1 RefSeq gene 4345676 4346524 . - . ID=gene3931;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YPTS_RS19720;old_locus_tag=YPTS_3911 NC_010634.1 Protein Homology CDS 4345676 4346524 . - 0 ID=cds3824;Parent=gene3931;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NC_010634.1 RefSeq gene 4346521 4347375 . - . ID=gene3932;Name=YPTS_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19725;old_locus_tag=YPTS_3912 NC_010634.1 Protein Homology CDS 4346521 4347375 . - 0 ID=cds3825;Parent=gene3932;Dbxref=Genbank:WP_002212309.1;Name=WP_002212309.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_002212309.1;transl_table=11 NC_010634.1 RefSeq gene 4347372 4348139 . - . ID=gene3933;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YPTS_RS19730;old_locus_tag=YPTS_3913 NC_010634.1 Protein Homology CDS 4347372 4348139 . - 0 ID=cds3826;Parent=gene3933;Dbxref=Genbank:WP_011193220.1;Name=WP_011193220.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_011193220.1;transl_table=11 NC_010634.1 RefSeq gene 4348148 4349191 . - . ID=gene3934;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YPTS_RS19735;old_locus_tag=YPTS_3914 NC_010634.1 Protein Homology CDS 4348148 4349191 . - 0 ID=cds3827;Parent=gene3934;Dbxref=Genbank:WP_012414073.1;Name=WP_012414073.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_012414073.1;transl_table=11 NC_010634.1 RefSeq gene 4349394 4349996 . - . ID=gene3935;Name=YPTS_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19740;old_locus_tag=YPTS_3915 NC_010634.1 Protein Homology CDS 4349394 4349996 . - 0 ID=cds3828;Parent=gene3935;Dbxref=Genbank:WP_011193221.1;Name=WP_011193221.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_011193221.1;transl_table=11 NC_010634.1 RefSeq gene 4350098 4351078 . + . ID=gene3936;Name=YPTS_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19745;old_locus_tag=YPTS_3916 NC_010634.1 Protein Homology CDS 4350098 4351078 . + 0 ID=cds3829;Parent=gene3936;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NC_010634.1 RefSeq gene 4351075 4351311 . + . ID=gene3937;Name=YPTS_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19750;old_locus_tag=YPTS_3917 NC_010634.1 Protein Homology CDS 4351075 4351311 . + 0 ID=cds3830;Parent=gene3937;Dbxref=Genbank:WP_011193222.1;Name=WP_011193222.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193222.1;transl_table=11 NC_010634.1 RefSeq gene 4351460 4352329 . + . ID=gene3938;Name=YPTS_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19755;old_locus_tag=YPTS_3918 NC_010634.1 Protein Homology CDS 4351460 4352329 . + 0 ID=cds3831;Parent=gene3938;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NC_010634.1 RefSeq gene 4352507 4352938 . - . ID=gene3939;Name=YPTS_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19760;old_locus_tag=YPTS_3919 NC_010634.1 Protein Homology CDS 4352507 4352938 . - 0 ID=cds3832;Parent=gene3939;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11 NC_010634.1 RefSeq gene 4353010 4353417 . - . ID=gene3940;Name=YPTS_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19765;old_locus_tag=YPTS_3920 NC_010634.1 Protein Homology CDS 4353010 4353417 . - 0 ID=cds3833;Parent=gene3940;Dbxref=Genbank:WP_012105874.1;Name=WP_012105874.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105874.1;transl_table=11 NC_010634.1 RefSeq gene 4353753 4354385 . + . ID=gene3941;Name=YPTS_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19770;old_locus_tag=YPTS_3921 NC_010634.1 Protein Homology CDS 4353753 4354385 . + 0 ID=cds3834;Parent=gene3941;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11 NC_010634.1 RefSeq gene 4354471 4356591 . + . ID=gene3942;Name=YPTS_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19775;old_locus_tag=YPTS_3922 NC_010634.1 Protein Homology CDS 4354471 4356591 . + 0 ID=cds3835;Parent=gene3942;Dbxref=Genbank:WP_011193223.1;Name=WP_011193223.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193223.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4356611 4356780 . + . ID=id301;gbkey=repeat_region NC_010634.1 RefSeq gene 4356817 4358034 . - . ID=gene3943;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YPTS_RS19780;old_locus_tag=YPTS_3924 NC_010634.1 Protein Homology CDS 4356817 4358034 . - 0 ID=cds3836;Parent=gene3943;Dbxref=Genbank:WP_011193224.1;Name=WP_011193224.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=succinyldiaminopimelate aminotransferase;protein_id=WP_011193224.1;transl_table=11 NC_010634.1 RefSeq gene 4358167 4358742 . - . ID=gene3944;Name=YPTS_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19785;old_locus_tag=YPTS_3925 NC_010634.1 Protein Homology CDS 4358167 4358742 . - 0 ID=cds3837;Parent=gene3944;Dbxref=Genbank:WP_011193225.1;Name=WP_011193225.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_011193225.1;transl_table=11 NC_010634.1 RefSeq gene 4358986 4360527 . - . ID=gene3945;Name=YPTS_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19790;old_locus_tag=YPTS_3926 NC_010634.1 Protein Homology CDS 4358986 4360527 . - 0 ID=cds3838;Parent=gene3945;Dbxref=Genbank:WP_011193226.1;Name=WP_011193226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193226.1;transl_table=11 NC_010634.1 RefSeq gene 4360853 4361422 . - . ID=gene3946;Name=YPTS_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19795;old_locus_tag=YPTS_3927 NC_010634.1 Protein Homology CDS 4360853 4361422 . - 0 ID=cds3839;Parent=gene3946;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11 NC_010634.1 RefSeq gene 4361937 4363250 . + . ID=gene3947;Name=YPTS_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19800;old_locus_tag=YPTS_3929 NC_010634.1 Protein Homology CDS 4361937 4363250 . + 0 ID=cds3840;Parent=gene3947;Dbxref=Genbank:WP_011193227.1;Name=WP_011193227.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_011193227.1;transl_table=11 NC_010634.1 RefSeq gene 4363499 4364485 . + . ID=gene3948;Name=YPTS_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19805;old_locus_tag=YPTS_3930 NC_010634.1 Protein Homology CDS 4363499 4364485 . + 0 ID=cds3841;Parent=gene3948;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NC_010634.1 RefSeq gene 4364570 4366615 . - . ID=gene3949;Name=YPTS_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19810;old_locus_tag=YPTS_3931 NC_010634.1 Protein Homology CDS 4364570 4366615 . - 0 ID=cds3842;Parent=gene3949;Dbxref=Genbank:WP_012105878.1;Name=WP_012105878.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_012105878.1;transl_table=11 NC_010634.1 RefSeq gene 4367101 4368285 . + . ID=gene3950;Name=YPTS_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19815;old_locus_tag=YPTS_3932 NC_010634.1 Protein Homology CDS 4367101 4368285 . + 0 ID=cds3843;Parent=gene3950;Dbxref=Genbank:WP_002215690.1;Name=WP_002215690.1;gbkey=CDS;product=protein TsgA;protein_id=WP_002215690.1;transl_table=11 NC_010634.1 RefSeq gene 4368370 4369668 . - . ID=gene3951;Name=YPTS_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19820;old_locus_tag=YPTS_3933 NC_010634.1 Protein Homology CDS 4368370 4369668 . - 0 ID=cds3844;Parent=gene3951;Dbxref=Genbank:WP_012414075.1;Name=WP_012414075.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_012414075.1;transl_table=11 NC_010634.1 RefSeq gene 4369990 4372536 . + . ID=gene3952;Name=YPTS_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19825;old_locus_tag=YPTS_3935 NC_010634.1 Protein Homology CDS 4369990 4372536 . + 0 ID=cds3845;Parent=gene3952;Dbxref=Genbank:WP_011193231.1;Name=WP_011193231.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_011193231.1;transl_table=11 NC_010634.1 RefSeq gene 4372533 4372859 . + . ID=gene3953;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YPTS_RS19830;old_locus_tag=YPTS_3936 NC_010634.1 Protein Homology CDS 4372533 4372859 . + 0 ID=cds3846;Parent=gene3953;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11 NC_010634.1 RefSeq gene 4373026 4373832 . + . ID=gene3954;Name=YPTS_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19835;old_locus_tag=YPTS_3937 NC_010634.1 Protein Homology CDS 4373026 4373832 . + 0 ID=cds3847;Parent=gene3954;Dbxref=Genbank:WP_002208888.1;Name=WP_002208888.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11 NC_010634.1 RefSeq gene 4373895 4375316 . + . ID=gene3955;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPTS_RS19840;old_locus_tag=YPTS_3938 NC_010634.1 Protein Homology CDS 4373895 4375316 . + 0 ID=cds3848;Parent=gene3955;Dbxref=Genbank:WP_012414077.1;Name=WP_012414077.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase;protein_id=WP_012414077.1;transl_table=11 NC_010634.1 RefSeq gene 4375453 4376493 . - . ID=gene3956;Name=YPTS_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19845;old_locus_tag=YPTS_3939 NC_010634.1 Protein Homology CDS 4375453 4376493 . - 0 ID=cds3849;Parent=gene3956;Dbxref=Genbank:WP_002208891.1;Name=WP_002208891.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_002208891.1;transl_table=11 NC_010634.1 RefSeq gene 4376495 4377193 . - . ID=gene3957;Name=YPTS_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19850;old_locus_tag=YPTS_3940 NC_010634.1 Protein Homology CDS 4376495 4377193 . - 0 ID=cds3850;Parent=gene3957;Dbxref=Genbank:WP_011193233.1;Name=WP_011193233.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_011193233.1;transl_table=11 NC_010634.1 RefSeq gene 4377186 4377863 . - . ID=gene3958;Name=YPTS_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19855;old_locus_tag=YPTS_3941 NC_010634.1 Protein Homology CDS 4377186 4377863 . - 0 ID=cds3851;Parent=gene3958;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NC_010634.1 RefSeq gene 4378166 4378981 . - . ID=gene3959;Name=YPTS_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19860;old_locus_tag=YPTS_3942 NC_010634.1 Protein Homology CDS 4378166 4378981 . - 0 ID=cds3852;Parent=gene3959;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11 NC_010634.1 RefSeq gene 4379065 4380054 . - . ID=gene3960;Name=YPTS_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19865;old_locus_tag=YPTS_3943 NC_010634.1 Protein Homology CDS 4379065 4380054 . - 0 ID=cds3853;Parent=gene3960;Dbxref=Genbank:WP_011193234.1;Name=WP_011193234.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193234.1;transl_table=11 NC_010634.1 RefSeq gene 4380308 4381396 . - . ID=gene3961;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YPTS_RS19870;old_locus_tag=YPTS_3944 NC_010634.1 Protein Homology CDS 4380308 4381396 . - 0 ID=cds3854;Parent=gene3961;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NC_010634.1 RefSeq gene 4381453 4381974 . - . ID=gene3962;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YPTS_RS19875;old_locus_tag=YPTS_3945 NC_010634.1 Protein Homology CDS 4381453 4381974 . - 0 ID=cds3855;Parent=gene3962;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11 NC_010634.1 RefSeq gene 4382323 4383447 . - . ID=gene3963;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=YPTS_RS19880 NC_010634.1 Protein Homology CDS 4382323 4383447 . - 0 ID=cds3856;Parent=gene3963;Dbxref=Genbank:WP_002228144.1;Name=WP_002228144.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_002228144.1;transl_table=11 NC_010634.1 RefSeq gene 4383874 4384233 . - . ID=gene3964;Name=YPTS_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19885;old_locus_tag=YPTS_3947 NC_010634.1 Protein Homology CDS 4383874 4384233 . - 0 ID=cds3857;Parent=gene3964;Dbxref=Genbank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223837.1;transl_table=11 NC_010634.1 RefSeq gene 4384253 4384834 . - . ID=gene3965;Name=YPTS_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19890;old_locus_tag=YPTS_3948 NC_010634.1 Protein Homology CDS 4384253 4384834 . - 0 ID=cds3858;Parent=gene3965;Dbxref=Genbank:WP_011193235.1;Name=WP_011193235.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193235.1;transl_table=11 NC_010634.1 RefSeq gene 4384827 4385432 . - . ID=gene3966;Name=YPTS_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19895;old_locus_tag=YPTS_3949 NC_010634.1 Protein Homology CDS 4384827 4385432 . - 0 ID=cds3859;Parent=gene3966;Dbxref=Genbank:WP_011193236.1;Name=WP_011193236.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_011193236.1;transl_table=11 NC_010634.1 RefSeq gene 4385432 4386328 . - . ID=gene3967;Name=YPTS_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19900;old_locus_tag=YPTS_3950 NC_010634.1 Protein Homology CDS 4385432 4386328 . - 0 ID=cds3860;Parent=gene3967;Dbxref=Genbank:WP_011193237.1;Name=WP_011193237.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_011193237.1;transl_table=11 NC_010634.1 RefSeq gene 4386448 4389003 . + . ID=gene3968;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YPTS_RS19905;old_locus_tag=YPTS_3951 NC_010634.1 Protein Homology CDS 4386448 4389003 . + 0 ID=cds3861;Parent=gene3968;Dbxref=Genbank:WP_011193238.1;Name=WP_011193238.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_011193238.1;transl_table=11 NC_010634.1 RefSeq gene 4389140 4389685 . - . ID=gene3969;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YPTS_RS19910;old_locus_tag=YPTS_3952 NC_010634.1 Protein Homology CDS 4389140 4389685 . - 0 ID=cds3862;Parent=gene3969;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4389797 4390156 . + . ID=id302;gbkey=repeat_region NC_010634.1 RefSeq gene 4390044 4390238 . - . ID=gene3970;Name=YPTS_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19915;old_locus_tag=YPTS_3953 NC_010634.1 Protein Homology CDS 4390044 4390238 . - 0 ID=cds3863;Parent=gene3970;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11 NC_010634.1 RefSeq gene 4390518 4392665 . + . ID=gene3971;Name=YPTS_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19920;old_locus_tag=YPTS_3954 NC_010634.1 Protein Homology CDS 4390518 4392665 . + 0 ID=cds3864;Parent=gene3971;Dbxref=Genbank:WP_011193239.1;Name=WP_011193239.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_011193239.1;transl_table=11 NC_010634.1 RefSeq gene 4392809 4393489 . + . ID=gene3972;Name=YPTS_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19925;old_locus_tag=YPTS_3955 NC_010634.1 Protein Homology CDS 4392809 4393489 . + 0 ID=cds3865;Parent=gene3972;Dbxref=Genbank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;product=nucleotidase;protein_id=WP_002208909.1;transl_table=11 NC_010634.1 RefSeq gene 4393518 4393925 . + . ID=gene3973;Name=YPTS_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19930;old_locus_tag=YPTS_3956 NC_010634.1 Protein Homology CDS 4393518 4393925 . + 0 ID=cds3866;Parent=gene3973;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NC_010634.1 RefSeq gene 4394088 4394969 . + . ID=gene3974;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YPTS_RS19935;old_locus_tag=YPTS_3957 NC_010634.1 Protein Homology CDS 4394088 4394969 . + 0 ID=cds3867;Parent=gene3974;Dbxref=Genbank:WP_002208911.1;Name=WP_002208911.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_002208911.1;transl_table=11 NC_010634.1 RefSeq gene 4395166 4396785 . + . ID=gene3975;Name=YPTS_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19940;old_locus_tag=YPTS_3958 NC_010634.1 Protein Homology CDS 4395166 4396785 . + 0 ID=cds3868;Parent=gene3975;Dbxref=Genbank:WP_011193240.1;Name=WP_011193240.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_011193240.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4396936 4397110 . + . ID=id303;gbkey=repeat_region NC_010634.1 RefSeq gene 4397104 4398456 . - . ID=gene3976;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=YPTS_RS19945;old_locus_tag=YPTS_3959 NC_010634.1 Protein Homology CDS 4397104 4398456 . - 0 ID=cds3869;Parent=gene3976;Dbxref=Genbank:WP_002208913.1;Name=WP_002208913.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_002208913.1;transl_table=11 NC_010634.1 RefSeq gene 4398453 4399172 . - . ID=gene3977;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YPTS_RS19950;old_locus_tag=YPTS_3960 NC_010634.1 Protein Homology CDS 4398453 4399172 . - 0 ID=cds3870;Parent=gene3977;Dbxref=Genbank:WP_002208914.1;Name=WP_002208914.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_002208914.1;transl_table=11 NC_010634.1 RefSeq gene 4399308 4399823 . - . ID=gene3978;Name=YPTS_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19955;old_locus_tag=YPTS_3961 NC_010634.1 Protein Homology CDS 4399308 4399823 . - 0 ID=cds3871;Parent=gene3978;Dbxref=Genbank:WP_002208915.1;Name=WP_002208915.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NC_010634.1 RefSeq gene 4400342 4402717 . + . ID=gene3979;Name=YPTS_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19960;old_locus_tag=YPTS_3962 NC_010634.1 Protein Homology CDS 4400342 4402717 . + 0 ID=cds3872;Parent=gene3979;Dbxref=Genbank:WP_011193241.1;Name=WP_011193241.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_011193241.1;transl_table=11 NC_010634.1 RefSeq gene 4403100 4403246 . - . ID=gene3980;Name=YPTS_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19965 NC_010634.1 Protein Homology CDS 4403100 4403246 . - 0 ID=cds3873;Parent=gene3980;Dbxref=Genbank:WP_002215925.1;Name=WP_002215925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215925.1;transl_table=11 NC_010634.1 RefSeq gene 4403241 4403468 . + . ID=gene3981;Name=YPTS_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19970;old_locus_tag=YPTS_3963 NC_010634.1 Protein Homology CDS 4403241 4403468 . + 0 ID=cds3874;Parent=gene3981;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11 NC_010634.1 RefSeq gene 4403560 4405875 . + . ID=gene3982;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YPTS_RS19975;old_locus_tag=YPTS_3964 NC_010634.1 Protein Homology CDS 4403560 4405875 . + 0 ID=cds3875;Parent=gene3982;Dbxref=Genbank:WP_011193242.1;Name=WP_011193242.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_011193242.1;transl_table=11 NC_010634.1 RefSeq gene 4405911 4406168 . + . ID=gene3983;Name=YPTS_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19980;old_locus_tag=YPTS_3965 NC_010634.1 Protein Homology CDS 4405911 4406168 . + 0 ID=cds3876;Parent=gene3983;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11 NC_010634.1 RefSeq gene 4406320 4406589 . - . ID=gene3984;Name=YPTS_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19985;old_locus_tag=YPTS_3966 NC_010634.1 Protein Homology CDS 4406320 4406589 . - 0 ID=cds3877;Parent=gene3984;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11 NC_010634.1 RefSeq gene 4406759 4407535 . - . ID=gene3985;Name=YPTS_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19990;old_locus_tag=YPTS_3967 NC_010634.1 Protein Homology CDS 4406759 4407535 . - 0 ID=cds3878;Parent=gene3985;Dbxref=Genbank:WP_011193243.1;Name=WP_011193243.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_011193243.1;transl_table=11 NC_010634.1 RefSeq gene 4407622 4408323 . + . ID=gene3986;Name=YPTS_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS19995;old_locus_tag=YPTS_3968 NC_010634.1 Protein Homology CDS 4407622 4408323 . + 0 ID=cds3879;Parent=gene3986;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11 NC_010634.1 RefSeq gene 4408383 4408958 . + . ID=gene3987;Name=YPTS_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20000;old_locus_tag=YPTS_3969 NC_010634.1 Protein Homology CDS 4408383 4408958 . + 0 ID=cds3880;Parent=gene3987;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11 NC_010634.1 RefSeq gene 4409143 4411239 . - . ID=gene3988;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YPTS_RS20005;old_locus_tag=YPTS_3970 NC_010634.1 Protein Homology CDS 4409143 4411239 . - 0 ID=cds3881;Parent=gene3988;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NC_010634.1 RefSeq gene 4411252 4413657 . - . ID=gene3989;Name=YPTS_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20010;old_locus_tag=YPTS_3971 NC_010634.1 Protein Homology CDS 4411252 4413657 . - 0 ID=cds3882;Parent=gene3989;Dbxref=Genbank:WP_011193244.1;Name=WP_011193244.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_011193244.1;transl_table=11 NC_010634.1 RefSeq gene 4413975 4416686 . + . ID=gene3990;Name=YPTS_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20015;old_locus_tag=YPTS_3972 NC_010634.1 Protein Homology CDS 4413975 4416686 . + 0 ID=cds3883;Parent=gene3990;Dbxref=Genbank:WP_002208926.1;Name=WP_002208926.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208926.1;transl_table=11 NC_010634.1 RefSeq gene 4417061 4417390 . + . ID=gene3991;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YPTS_RS20020;old_locus_tag=YPTS_3973 NC_010634.1 Protein Homology CDS 4417061 4417390 . + 0 ID=cds3884;Parent=gene3991;Dbxref=Genbank:WP_002218928.1;Name=WP_002218928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002218928.1;transl_table=11 NC_010634.1 RefSeq gene 4417408 4418244 . + . ID=gene3992;Name=YPTS_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20025;old_locus_tag=YPTS_3974 NC_010634.1 Protein Homology CDS 4417408 4418244 . + 0 ID=cds3885;Parent=gene3992;Dbxref=Genbank:WP_002216348.1;Name=WP_002216348.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_002216348.1;transl_table=11 NC_010634.1 RefSeq gene 4418279 4419037 . + . ID=gene3993;Name=YPTS_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20030;old_locus_tag=YPTS_3975 NC_010634.1 Protein Homology CDS 4418279 4419037 . + 0 ID=cds3886;Parent=gene3993;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NC_010634.1 RefSeq gene 4419041 4419253 . + . ID=gene3994;Name=YPTS_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20035 NC_010634.1 Protein Homology CDS 4419041 4419253 . + 0 ID=cds3887;Parent=gene3994;Dbxref=Genbank:WP_041175478.1;Name=WP_041175478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175478.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4419100 4419381 . + . ID=id304;gbkey=repeat_region NC_010634.1 RefSeq gene 4419506 4419775 . - . ID=gene3995;Name=YPTS_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20040 NC_010634.1 Protein Homology CDS 4419506 4419775 . - 0 ID=cds3888;Parent=gene3995;Dbxref=Genbank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11 NC_010634.1 RefSeq gene 4419940 4420404 . - . ID=gene3996;Name=YPTS_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20045;old_locus_tag=YPTS_3977 NC_010634.1 Protein Homology CDS 4419940 4420404 . - 0 ID=cds3889;Parent=gene3996;Dbxref=Genbank:WP_011193247.1;Name=WP_011193247.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193247.1;transl_table=11 NC_010634.1 RefSeq gene 4420713 4421091 . - . ID=gene3997;Name=YPTS_RS20050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS20050;pseudo=true NC_010634.1 Protein Homology CDS 4420713 4421091 . - 0 ID=cds3890;Parent=gene3997;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4421490 4423004 . + . ID=gene3998;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=YPTS_RS20055;old_locus_tag=YPTS_3979 NC_010634.1 Protein Homology CDS 4421490 4423004 . + 0 ID=cds3891;Parent=gene3998;Dbxref=Genbank:WP_002220236.1;Name=WP_002220236.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002220236.1;transl_table=11 NC_010634.1 RefSeq gene 4423166 4425613 . - . ID=gene3999;Name=YPTS_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20060;old_locus_tag=YPTS_3980 NC_010634.1 Protein Homology CDS 4423166 4425613 . - 0 ID=cds3892;Parent=gene3999;Dbxref=Genbank:WP_011193248.1;Name=WP_011193248.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_011193248.1;transl_table=11 NC_010634.1 RefSeq gene 4425750 4427180 . - . ID=gene4000;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YPTS_RS20065;old_locus_tag=YPTS_3981 NC_010634.1 Protein Homology CDS 4425750 4427180 . - 0 ID=cds3893;Parent=gene4000;Dbxref=Genbank:WP_012414083.1;Name=WP_012414083.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_012414083.1;transl_table=11 NC_010634.1 RefSeq gene 4427391 4428677 . - . ID=gene4001;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YPTS_RS20070;old_locus_tag=YPTS_3982 NC_010634.1 Protein Homology CDS 4427391 4428677 . - 0 ID=cds3894;Parent=gene4001;Dbxref=Genbank:WP_011193249.1;Name=WP_011193249.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_011193249.1;transl_table=11 NC_010634.1 RefSeq gene 4428687 4430675 . - . ID=gene4002;Name=YPTS_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20075;old_locus_tag=YPTS_3983 NC_010634.1 Protein Homology CDS 4428687 4430675 . - 0 ID=cds3895;Parent=gene4002;Dbxref=Genbank:WP_012414084.1;Name=WP_012414084.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_012414084.1;transl_table=11 NC_010634.1 RefSeq gene 4430677 4432860 . - . ID=gene4003;Name=YPTS_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20080;old_locus_tag=YPTS_3984 NC_010634.1 Protein Homology CDS 4430677 4432860 . - 0 ID=cds3896;Parent=gene4003;Dbxref=Genbank:WP_011193251.1;Name=WP_011193251.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=WP_011193251.1;transl_table=11 NC_010634.1 RefSeq gene 4433366 4435063 . + . ID=gene4004;Name=YPTS_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20085;old_locus_tag=YPTS_3985 NC_010634.1 Protein Homology CDS 4433366 4435063 . + 0 ID=cds3897;Parent=gene4004;Dbxref=Genbank:WP_011193252.1;Name=WP_011193252.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_011193252.1;transl_table=11 NC_010634.1 RefSeq gene 4435258 4446966 . - . ID=gene4005;Name=YPTS_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20090;old_locus_tag=YPTS_3986 NC_010634.1 Protein Homology CDS 4435258 4446966 . - 0 ID=cds3898;Parent=gene4005;Dbxref=Genbank:WP_049772371.1;Name=WP_049772371.1;gbkey=CDS;product=invasin;protein_id=WP_049772371.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4439744 4439871 . + . ID=id305;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 4439879 4440738 . + . ID=id306;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 4441819 4442151 . + . ID=id307;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 4442300 4442487 . + . ID=id308;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 4443170 4443285 . + . ID=id309;gbkey=repeat_region NC_010634.1 RefSeq repeat_region 4443850 4444123 . + . ID=id310;gbkey=repeat_region NC_010634.1 RefSeq gene 4448512 4448736 . + . ID=gene4006;Name=YPTS_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20095 NC_010634.1 Protein Homology CDS 4448512 4448736 . + 0 ID=cds3899;Parent=gene4006;Dbxref=Genbank:WP_032466826.1;Name=WP_032466826.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466826.1;transl_table=11 NC_010634.1 RefSeq gene 4449050 4449433 . - . ID=gene4007;Name=YPTS_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20100;old_locus_tag=YPTS_3987 NC_010634.1 Protein Homology CDS 4449050 4449433 . - 0 ID=cds3900;Parent=gene4007;Dbxref=Genbank:WP_012414086.1;Name=WP_012414086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414086.1;transl_table=11 NC_010634.1 RefSeq gene 4449641 4449928 . - . ID=gene4008;Name=YPTS_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20105;old_locus_tag=YPTS_3988 NC_010634.1 Protein Homology CDS 4449641 4449928 . - 0 ID=cds3901;Parent=gene4008;Dbxref=Genbank:WP_012414087.1;Name=WP_012414087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414087.1;transl_table=11 NC_010634.1 RefSeq gene 4449935 4450234 . - . ID=gene4009;Name=YPTS_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20110;old_locus_tag=YPTS_3989 NC_010634.1 Protein Homology CDS 4449935 4450234 . - 0 ID=cds3902;Parent=gene4009;Dbxref=Genbank:WP_032466825.1;Name=WP_032466825.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466825.1;transl_table=11 NC_010634.1 RefSeq gene 4450254 4450730 . - . ID=gene4010;Name=YPTS_RS20115;end_range=4450730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS20115;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 4450254 4450730 . - 0 ID=cds3903;Parent=gene4010;end_range=4450730,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4450988 4452091 . - . ID=gene4011;Name=YPTS_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20120;old_locus_tag=YPTS_3990 NC_010634.1 Protein Homology CDS 4450988 4452091 . - 0 ID=cds3904;Parent=gene4011;Dbxref=Genbank:WP_002209507.1;Name=WP_002209507.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NC_010634.1 RefSeq gene 4452450 4453043 . + . ID=gene4012;Name=YPTS_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20125;old_locus_tag=YPTS_3991 NC_010634.1 Protein Homology CDS 4452450 4453043 . + 0 ID=cds3905;Parent=gene4012;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11 NC_010634.1 RefSeq gene 4453229 4453618 . - . ID=gene4013;Name=YPTS_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20130;old_locus_tag=YPTS_3992 NC_010634.1 Protein Homology CDS 4453229 4453618 . - 0 ID=cds3906;Parent=gene4013;Dbxref=Genbank:WP_012414089.1;Name=WP_012414089.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414089.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4453361 4453674 . + . ID=id311;gbkey=repeat_region NC_010634.1 RefSeq gene 4453725 4454117 . - . ID=gene4014;Name=YPTS_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20135;old_locus_tag=YPTS_3993 NC_010634.1 Protein Homology CDS 4453725 4454117 . - 0 ID=cds3907;Parent=gene4014;Dbxref=Genbank:WP_011193256.1;Name=WP_011193256.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193256.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4453860 4454173 . + . ID=id312;gbkey=repeat_region NC_010634.1 RefSeq gene 4455131 4455361 . - . ID=gene4015;Name=YPTS_RS20150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS20150;partial=true;pseudo=true;start_range=.,4455131 NC_010634.1 Protein Homology CDS 4455131 4455361 . - 0 ID=cds3908;Parent=gene4015;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,4455131;transl_table=11 NC_010634.1 RefSeq gene 4455543 4456046 . - . ID=gene4016;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPTS_RS20155;old_locus_tag=YPTS_3995 NC_010634.1 Protein Homology CDS 4455543 4456046 . - 0 ID=cds3909;Parent=gene4016;Dbxref=Genbank:WP_012414091.1;Name=WP_012414091.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_012414091.1;transl_table=11 NC_010634.1 RefSeq gene 4456263 4457579 . + . ID=gene4017;Name=YPTS_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20160;old_locus_tag=YPTS_3996 NC_010634.1 Protein Homology CDS 4456263 4457579 . + 0 ID=cds3910;Parent=gene4017;Dbxref=Genbank:WP_011193259.1;Name=WP_011193259.1;gbkey=CDS;product=idonate transporter;protein_id=WP_011193259.1;transl_table=11 NC_010634.1 RefSeq gene 4457671 4458666 . - . ID=gene4018;Name=YPTS_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20165;old_locus_tag=YPTS_3997 NC_010634.1 Protein Homology CDS 4457671 4458666 . - 0 ID=cds3911;Parent=gene4018;Dbxref=Genbank:WP_012105911.1;Name=WP_012105911.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105911.1;transl_table=11 NC_010634.1 RefSeq gene 4458795 4459490 . - . ID=gene4019;Name=YPTS_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20170;old_locus_tag=YPTS_3998 NC_010634.1 Protein Homology CDS 4458795 4459490 . - 0 ID=cds3912;Parent=gene4019;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11 NC_010634.1 RefSeq gene 4459985 4460254 . + . ID=gene4020;Name=YPTS_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20175 NC_010634.1 Protein Homology CDS 4459985 4460254 . + 0 ID=cds3913;Parent=gene4020;Dbxref=Genbank:WP_011193261.1;Name=WP_011193261.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193261.1;transl_table=11 NC_010634.1 RefSeq gene 4460254 4460991 . + . ID=gene4021;Name=YPTS_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20180;old_locus_tag=YPTS_4000 NC_010634.1 Protein Homology CDS 4460254 4460991 . + 0 ID=cds3914;Parent=gene4021;Dbxref=Genbank:WP_002209516.1;Name=WP_002209516.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209516.1;transl_table=11 NC_010634.1 RefSeq gene 4461066 4462073 . - . ID=gene4022;Name=YPTS_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20185;old_locus_tag=YPTS_4001 NC_010634.1 Protein Homology CDS 4461066 4462073 . - 0 ID=cds3915;Parent=gene4022;Dbxref=Genbank:WP_011193262.1;Name=WP_011193262.1;gbkey=CDS;product=sugar kinase;protein_id=WP_011193262.1;transl_table=11 NC_010634.1 RefSeq gene 4462083 4462943 . - . ID=gene4023;Name=YPTS_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20190;old_locus_tag=YPTS_4002 NC_010634.1 Protein Homology CDS 4462083 4462943 . - 0 ID=cds3916;Parent=gene4023;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11 NC_010634.1 RefSeq gene 4462969 4463652 . - . ID=gene4024;Name=YPTS_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20195;old_locus_tag=YPTS_4003 NC_010634.1 Protein Homology CDS 4462969 4463652 . - 0 ID=cds3917;Parent=gene4024;Dbxref=Genbank:WP_012105913.1;Name=WP_012105913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105913.1;transl_table=11 NC_010634.1 RefSeq gene 4463727 4464671 . - . ID=gene4025;Name=YPTS_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20200;old_locus_tag=YPTS_4004 NC_010634.1 Protein Homology CDS 4463727 4464671 . - 0 ID=cds3918;Parent=gene4025;Dbxref=Genbank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NC_010634.1 RefSeq gene 4464702 4465694 . - . ID=gene4026;Name=YPTS_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20205;old_locus_tag=YPTS_4005 NC_010634.1 Protein Homology CDS 4464702 4465694 . - 0 ID=cds3919;Parent=gene4026;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11 NC_010634.1 RefSeq gene 4465687 4467210 . - . ID=gene4027;Name=YPTS_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20210;old_locus_tag=YPTS_4006 NC_010634.1 Protein Homology CDS 4465687 4467210 . - 0 ID=cds3920;Parent=gene4027;Dbxref=Genbank:WP_012414093.1;Name=WP_012414093.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=D-ribose transporter ATP-binding protein;protein_id=WP_012414093.1;transl_table=11 NC_010634.1 RefSeq gene 4467399 4469954 . + . ID=gene4028;Name=YPTS_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20215;old_locus_tag=YPTS_4007 NC_010634.1 Protein Homology CDS 4467399 4469954 . + 0 ID=cds3921;Parent=gene4028;Dbxref=Genbank:WP_012303369.1;Name=WP_012303369.1;gbkey=CDS;product=histidine kinase;protein_id=WP_012303369.1;transl_table=11 NC_010634.1 RefSeq gene 4470588 4472795 . - . ID=gene4029;Name=YPTS_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20220;old_locus_tag=YPTS_4009 NC_010634.1 Protein Homology CDS 4470588 4472795 . - 0 ID=cds3922;Parent=gene4029;Dbxref=Genbank:WP_012414095.1;Name=WP_012414095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414095.1;transl_table=11 NC_010634.1 RefSeq gene 4473031 4474338 . - . ID=gene4030;Name=YPTS_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20225;old_locus_tag=YPTS_4010 NC_010634.1 Protein Homology CDS 4473031 4474338 . - 0 ID=cds3923;Parent=gene4030;Dbxref=Genbank:WP_012414096.1;Name=WP_012414096.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414096.1;transl_table=11 NC_010634.1 RefSeq gene 4474769 4475149 . - . ID=gene4031;Name=YPTS_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20230;old_locus_tag=YPTS_4011 NC_010634.1 Protein Homology CDS 4474769 4475149 . - 0 ID=cds3924;Parent=gene4031;Dbxref=Genbank:WP_012414097.1;Name=WP_012414097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414097.1;transl_table=11 NC_010634.1 RefSeq gene 4475213 4475767 . - . ID=gene4032;Name=YPTS_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20235;old_locus_tag=YPTS_4012 NC_010634.1 Protein Homology CDS 4475213 4475767 . - 0 ID=cds3925;Parent=gene4032;Dbxref=Genbank:WP_012414098.1;Name=WP_012414098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414098.1;transl_table=11 NC_010634.1 RefSeq gene 4476084 4477124 . + . ID=gene4033;Name=YPTS_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20240;old_locus_tag=YPTS_4013 NC_010634.1 Protein Homology CDS 4476084 4477124 . + 0 ID=cds3926;Parent=gene4033;Dbxref=Genbank:WP_012414099.1;Name=WP_012414099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414099.1;transl_table=11 NC_010634.1 RefSeq gene 4477121 4478860 . + . ID=gene4034;Name=YPTS_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20245;old_locus_tag=YPTS_4014 NC_010634.1 Protein Homology CDS 4477121 4478860 . + 0 ID=cds3927;Parent=gene4034;Dbxref=Genbank:WP_012414100.1;Name=WP_012414100.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_012414100.1;transl_table=11 NC_010634.1 RefSeq gene 4478850 4479344 . + . ID=gene4035;Name=YPTS_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20250;old_locus_tag=YPTS_4015 NC_010634.1 Protein Homology CDS 4478850 4479344 . + 0 ID=cds3928;Parent=gene4035;Dbxref=Genbank:WP_012414101.1;Name=WP_012414101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414101.1;transl_table=11 NC_010634.1 RefSeq gene 4479341 4480930 . + . ID=gene4036;Name=YPTS_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20255;old_locus_tag=YPTS_4016 NC_010634.1 Protein Homology CDS 4479341 4480930 . + 0 ID=cds3929;Parent=gene4036;Dbxref=Genbank:WP_012414102.1;Name=WP_012414102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414102.1;transl_table=11 NC_010634.1 RefSeq gene 4480986 4481486 . + . ID=gene4037;Name=YPTS_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20260;old_locus_tag=YPTS_4017 NC_010634.1 Protein Homology CDS 4480986 4481486 . + 0 ID=cds3930;Parent=gene4037;Dbxref=Genbank:WP_012414103.1;Name=WP_012414103.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414103.1;transl_table=11 NC_010634.1 RefSeq gene 4481533 4482531 . - . ID=gene4038;Name=YPTS_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20265;old_locus_tag=YPTS_4018 NC_010634.1 Protein Homology CDS 4481533 4482531 . - 0 ID=cds3931;Parent=gene4038;Dbxref=Genbank:WP_012414104.1;Name=WP_012414104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414104.1;transl_table=11 NC_010634.1 RefSeq gene 4482542 4483951 . - . ID=gene4039;Name=YPTS_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20270;old_locus_tag=YPTS_4019 NC_010634.1 Protein Homology CDS 4482542 4483951 . - 0 ID=cds3932;Parent=gene4039;Dbxref=Genbank:WP_012414105.1;Name=WP_012414105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414105.1;transl_table=11 NC_010634.1 RefSeq gene 4483969 4485393 . - . ID=gene4040;Name=YPTS_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20275;old_locus_tag=YPTS_4020 NC_010634.1 Protein Homology CDS 4483969 4485393 . - 0 ID=cds3933;Parent=gene4040;Dbxref=Genbank:WP_012414106.1;Name=WP_012414106.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_012414106.1;transl_table=11 NC_010634.1 RefSeq gene 4485390 4487555 . - . ID=gene4041;Name=YPTS_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20280;old_locus_tag=YPTS_4021 NC_010634.1 Protein Homology CDS 4485390 4487555 . - 0 ID=cds3934;Parent=gene4041;Dbxref=Genbank:WP_012414107.1;Name=WP_012414107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414107.1;transl_table=11 NC_010634.1 RefSeq gene 4487545 4488366 . - . ID=gene4042;Name=YPTS_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20285;old_locus_tag=YPTS_4022 NC_010634.1 Protein Homology CDS 4487545 4488366 . - 0 ID=cds3935;Parent=gene4042;Dbxref=Genbank:WP_012414108.1;Name=WP_012414108.1;gbkey=CDS;product=transposase;protein_id=WP_012414108.1;transl_table=11 NC_010634.1 RefSeq gene 4488464 4489666 . - . ID=gene4043;Name=YPTS_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20290;old_locus_tag=YPTS_4023 NC_010634.1 Protein Homology CDS 4488464 4489666 . - 0 ID=cds3936;Parent=gene4043;Dbxref=Genbank:WP_032466898.1;Name=WP_032466898.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466898.1;transl_table=11 NC_010634.1 RefSeq gene 4489977 4491473 . + . ID=gene4044;Name=YPTS_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20295;old_locus_tag=YPTS_4024 NC_010634.1 Protein Homology CDS 4489977 4491473 . + 0 ID=cds3937;Parent=gene4044;Dbxref=Genbank:WP_011193267.1;Name=WP_011193267.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_011193267.1;transl_table=11 NC_010634.1 RefSeq gene 4491620 4491955 . - . ID=gene4045;Name=YPTS_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20300;old_locus_tag=YPTS_4025 NC_010634.1 Protein Homology CDS 4491620 4491955 . - 0 ID=cds3938;Parent=gene4045;Dbxref=Genbank:WP_002209527.1;Name=WP_002209527.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002209527.1;transl_table=11 NC_010634.1 RefSeq gene 4492680 4493126 . + . ID=gene4046;Name=YPTS_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20305;old_locus_tag=YPTS_4026 NC_010634.1 Protein Homology CDS 4492680 4493126 . + 0 ID=cds3939;Parent=gene4046;Dbxref=Genbank:WP_002209528.1;Name=WP_002209528.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_002209528.1;transl_table=11 NC_010634.1 RefSeq gene 4493373 4494716 . + . ID=gene4047;Name=YPTS_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20310;old_locus_tag=YPTS_4027 NC_010634.1 Protein Homology CDS 4493373 4494716 . + 0 ID=cds3940;Parent=gene4047;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NC_010634.1 RefSeq gene 4494963 4496297 . + . ID=gene4048;Name=YPTS_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20315;old_locus_tag=YPTS_4028 NC_010634.1 Protein Homology CDS 4494963 4496297 . + 0 ID=cds3941;Parent=gene4048;Dbxref=Genbank:WP_012414110.1;Name=WP_012414110.1;gbkey=CDS;product=peptidase M10;protein_id=WP_012414110.1;transl_table=11 NC_010634.1 RefSeq gene 4496362 4497132 . - . ID=gene4049;Name=YPTS_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20320;old_locus_tag=YPTS_4029 NC_010634.1 Protein Homology CDS 4496362 4497132 . - 0 ID=cds3942;Parent=gene4049;Dbxref=Genbank:WP_002215483.1;Name=WP_002215483.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_002215483.1;transl_table=11 NC_010634.1 RefSeq gene 4497136 4499178 . - . ID=gene4050;Name=YPTS_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20325;old_locus_tag=YPTS_4030 NC_010634.1 Protein Homology CDS 4497136 4499178 . - 0 ID=cds3943;Parent=gene4050;Dbxref=Genbank:WP_012303363.1;Name=WP_012303363.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_012303363.1;transl_table=11 NC_010634.1 RefSeq gene 4499507 4500349 . + . ID=gene4051;Name=YPTS_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20330;old_locus_tag=YPTS_4031 NC_010634.1 Protein Homology CDS 4499507 4500349 . + 0 ID=cds3944;Parent=gene4051;Dbxref=Genbank:WP_011193270.1;Name=WP_011193270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193270.1;transl_table=11 NC_010634.1 RefSeq gene 4500517 4501869 . + . ID=gene4052;Name=YPTS_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20335;old_locus_tag=YPTS_4032 NC_010634.1 Protein Homology CDS 4500517 4501869 . + 0 ID=cds3945;Parent=gene4052;Dbxref=Genbank:WP_012303362.1;Name=WP_012303362.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_012303362.1;transl_table=11 NC_010634.1 RefSeq gene 4502140 4503267 . + . ID=gene4053;Name=YPTS_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20340;old_locus_tag=YPTS_4033 NC_010634.1 Protein Homology CDS 4502140 4503267 . + 0 ID=cds3946;Parent=gene4053;Dbxref=Genbank:WP_011193272.1;Name=WP_011193272.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_011193272.1;transl_table=11 NC_010634.1 RefSeq gene 4503445 4504713 . + . ID=gene4054;Name=YPTS_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20345;old_locus_tag=YPTS_4034 NC_010634.1 Protein Homology CDS 4503445 4504713 . + 0 ID=cds3947;Parent=gene4054;Dbxref=Genbank:WP_012105926.1;Name=WP_012105926.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_012105926.1;transl_table=11 NC_010634.1 RefSeq gene 4504724 4505860 . + . ID=gene4055;Name=YPTS_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20350;old_locus_tag=YPTS_4035 NC_010634.1 Protein Homology CDS 4504724 4505860 . + 0 ID=cds3948;Parent=gene4055;Dbxref=Genbank:WP_012414111.1;Name=WP_012414111.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_012414111.1;transl_table=11 NC_010634.1 RefSeq gene 4506106 4506606 . - . ID=gene4056;Name=YPTS_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20355;old_locus_tag=YPTS_4036 NC_010634.1 Protein Homology CDS 4506106 4506606 . - 0 ID=cds3949;Parent=gene4056;Dbxref=Genbank:WP_012414112.1;Name=WP_012414112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414112.1;transl_table=11 NC_010634.1 RefSeq gene 4506688 4507194 . - . ID=gene4057;Name=YPTS_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20360;old_locus_tag=YPTS_4037 NC_010634.1 Protein Homology CDS 4506688 4507194 . - 0 ID=cds3950;Parent=gene4057;Dbxref=Genbank:WP_012414113.1;Name=WP_012414113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414113.1;transl_table=11 NC_010634.1 RefSeq gene 4507196 4507975 . - . ID=gene4058;Name=YPTS_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20365;old_locus_tag=YPTS_4038 NC_010634.1 Protein Homology CDS 4507196 4507975 . - 0 ID=cds3951;Parent=gene4058;Dbxref=Genbank:WP_041175612.1;Name=WP_041175612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175612.1;transl_table=11 NC_010634.1 RefSeq gene 4508153 4511356 . - . ID=gene4059;Name=YPTS_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20370;old_locus_tag=YPTS_4039 NC_010634.1 Protein Homology CDS 4508153 4511356 . - 0 ID=cds3952;Parent=gene4059;Dbxref=Genbank:WP_012414115.1;Name=WP_012414115.1;gbkey=CDS;product=autotransporter;protein_id=WP_012414115.1;transl_table=11 NC_010634.1 RefSeq gene 4512039 4513121 . + . ID=gene4060;Name=YPTS_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20375;old_locus_tag=YPTS_4040 NC_010634.1 Protein Homology CDS 4512039 4513121 . + 0 ID=cds3953;Parent=gene4060;Dbxref=Genbank:WP_012414116.1;Name=WP_012414116.1;gbkey=CDS;product=membrane protein;protein_id=WP_012414116.1;transl_table=11 NC_010634.1 RefSeq gene 4513125 4513922 . + . ID=gene4061;Name=YPTS_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20380;old_locus_tag=YPTS_4041 NC_010634.1 Protein Homology CDS 4513125 4513922 . + 0 ID=cds3954;Parent=gene4061;Dbxref=Genbank:WP_012414117.1;Name=WP_012414117.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_012414117.1;transl_table=11 NC_010634.1 RefSeq gene 4513927 4516152 . - . ID=gene4062;Name=YPTS_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20385;old_locus_tag=YPTS_4042 NC_010634.1 Protein Homology CDS 4513927 4516152 . - 0 ID=cds3955;Parent=gene4062;Dbxref=Genbank:WP_012414118.1;Name=WP_012414118.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414118.1;transl_table=11 NC_010634.1 RefSeq gene 4516457 4517302 . - . ID=gene4063;Name=YPTS_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20390;old_locus_tag=YPTS_4043 NC_010634.1 Protein Homology CDS 4516457 4517302 . - 0 ID=cds3956;Parent=gene4063;Dbxref=Genbank:WP_012414119.1;Name=WP_012414119.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=WP_012414119.1;transl_table=11 NC_010634.1 RefSeq gene 4517521 4517721 . + . ID=gene4064;Name=YPTS_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20395;old_locus_tag=YPTS_4044 NC_010634.1 Protein Homology CDS 4517521 4517721 . + 0 ID=cds3957;Parent=gene4064;Dbxref=Genbank:WP_002209548.1;Name=WP_002209548.1;gbkey=CDS;product=tautomerase;protein_id=WP_002209548.1;transl_table=11 NC_010634.1 RefSeq gene 4518000 4518944 . + . ID=gene4065;Name=YPTS_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20400;old_locus_tag=YPTS_4045 NC_010634.1 Protein Homology CDS 4518000 4518944 . + 0 ID=cds3958;Parent=gene4065;Dbxref=Genbank:WP_011193283.1;Name=WP_011193283.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=ketodeoxygluconokinase;protein_id=WP_011193283.1;transl_table=11 NC_010634.1 RefSeq gene 4519108 4520607 . - . ID=gene4066;Name=YPTS_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20405;old_locus_tag=YPTS_4046 NC_010634.1 Protein Homology CDS 4519108 4520607 . - 0 ID=cds3959;Parent=gene4066;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11 NC_010634.1 RefSeq gene 4520972 4522261 . - . ID=gene4067;Name=YPTS_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20410;old_locus_tag=YPTS_4048 NC_010634.1 Protein Homology CDS 4520972 4522261 . - 0 ID=cds3960;Parent=gene4067;Dbxref=Genbank:WP_002209553.1;Name=WP_002209553.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_002209553.1;transl_table=11 NC_010634.1 RefSeq gene 4522717 4523196 . - . ID=gene4068;Name=YPTS_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20415;old_locus_tag=YPTS_4049 NC_010634.1 Protein Homology CDS 4522717 4523196 . - 0 ID=cds3961;Parent=gene4068;Dbxref=Genbank:WP_012105939.1;Name=WP_012105939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105939.1;transl_table=11 NC_010634.1 RefSeq gene 4523321 4525039 . - . ID=gene4069;Name=YPTS_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20420;old_locus_tag=YPTS_4050 NC_010634.1 Protein Homology CDS 4523321 4525039 . - 0 ID=cds3962;Parent=gene4069;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NC_010634.1 RefSeq gene 4525285 4525989 . - . ID=gene4070;Name=YPTS_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20425;old_locus_tag=YPTS_4051 NC_010634.1 Protein Homology CDS 4525285 4525989 . - 0 ID=cds3963;Parent=gene4070;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11 NC_010634.1 RefSeq gene 4526630 4528612 . - . ID=gene4071;Name=YPTS_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20430;old_locus_tag=YPTS_4052 NC_010634.1 Protein Homology CDS 4526630 4528612 . - 0 ID=cds3964;Parent=gene4071;Dbxref=Genbank:WP_032466832.1;Name=WP_032466832.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_032466832.1;transl_table=11 NC_010634.1 RefSeq gene 4528959 4530074 . - . ID=gene4072;Name=YPTS_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20435;old_locus_tag=YPTS_4053 NC_010634.1 Protein Homology CDS 4528959 4530074 . - 0 ID=cds3965;Parent=gene4072;Dbxref=Genbank:WP_011193286.1;Name=WP_011193286.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endonuclease III;protein_id=WP_011193286.1;transl_table=11 NC_010634.1 RefSeq gene 4530178 4531185 . - . ID=gene4073;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YPTS_RS20440;old_locus_tag=YPTS_4054 NC_010634.1 Protein Homology CDS 4530178 4531185 . - 0 ID=cds3966;Parent=gene4073;Dbxref=Genbank:WP_002228160.1;Name=WP_002228160.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002228160.1;transl_table=11 NC_010634.1 RefSeq gene 4531251 4532231 . - . ID=gene4074;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YPTS_RS20445;old_locus_tag=YPTS_4055 NC_010634.1 Protein Homology CDS 4531251 4532231 . - 0 ID=cds3967;Parent=gene4074;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NC_010634.1 RefSeq gene 4532245 4533147 . - . ID=gene4075;Name=YPTS_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20450;old_locus_tag=YPTS_4056 NC_010634.1 Protein Homology CDS 4532245 4533147 . - 0 ID=cds3968;Parent=gene4075;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11 NC_010634.1 RefSeq gene 4533158 4534177 . - . ID=gene4076;Name=YPTS_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20455;old_locus_tag=YPTS_4057 NC_010634.1 Protein Homology CDS 4533158 4534177 . - 0 ID=cds3969;Parent=gene4076;Dbxref=Genbank:WP_012414122.1;Name=WP_012414122.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_012414122.1;transl_table=11 NC_010634.1 RefSeq gene 4534460 4536067 . - . ID=gene4077;Name=YPTS_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20460;old_locus_tag=YPTS_4058 NC_010634.1 Protein Homology CDS 4534460 4536067 . - 0 ID=cds3970;Parent=gene4077;Dbxref=Genbank:WP_011193287.1;Name=WP_011193287.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_011193287.1;transl_table=11 NC_010634.1 RefSeq gene 4536470 4536676 . - . ID=gene4078;Name=YPTS_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20465;old_locus_tag=YPTS_4059 NC_010634.1 Protein Homology CDS 4536470 4536676 . - 0 ID=cds3971;Parent=gene4078;Dbxref=Genbank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11 NC_010634.1 RefSeq gene 4536736 4538406 . - . ID=gene4079;Name=YPTS_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20470;old_locus_tag=YPTS_4060 NC_010634.1 Protein Homology CDS 4536736 4538406 . - 0 ID=cds3972;Parent=gene4079;Dbxref=Genbank:WP_041175521.1;Name=WP_041175521.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_041175521.1;transl_table=11 NC_010634.1 RefSeq gene 4538608 4539999 . - . ID=gene4080;Name=YPTS_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20475;old_locus_tag=YPTS_4061 NC_010634.1 Protein Homology CDS 4538608 4539999 . - 0 ID=cds3973;Parent=gene4080;Dbxref=Genbank:WP_011193289.1;Name=WP_011193289.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_011193289.1;transl_table=11 NC_010634.1 RefSeq gene 4540311 4540387 . - . ID=gene4081;Name=YPTS_RS20480;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS20480;old_locus_tag=YPTS_R0053 NC_010634.1 tRNAscan-SE tRNA 4540311 4540387 . - . ID=rna99;Parent=gene4081;anticodon=(pos:complement(4540351..4540353));gbkey=tRNA;product=tRNA-Pro NC_010634.1 tRNAscan-SE exon 4540311 4540387 . - . ID=id313;Parent=rna99;anticodon=(pos:complement(4540351..4540353));gbkey=tRNA;product=tRNA-Pro NC_010634.1 RefSeq gene 4540504 4541835 . - . ID=gene4082;Name=YPTS_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20485;old_locus_tag=YPTS_4063 NC_010634.1 Protein Homology CDS 4540504 4541835 . - 0 ID=cds3974;Parent=gene4082;Dbxref=Genbank:WP_011193290.1;Name=WP_011193290.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193290.1;transl_table=11 NC_010634.1 RefSeq gene 4541930 4543459 . - . ID=gene4083;Name=YPTS_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20490;old_locus_tag=YPTS_4064 NC_010634.1 Protein Homology CDS 4541930 4543459 . - 0 ID=cds3975;Parent=gene4083;Dbxref=Genbank:WP_012414123.1;Name=WP_012414123.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_012414123.1;transl_table=11 NC_010634.1 RefSeq gene 4543456 4544046 . - . ID=gene4084;Name=YPTS_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20495;old_locus_tag=YPTS_4065 NC_010634.1 Protein Homology CDS 4543456 4544046 . - 0 ID=cds3976;Parent=gene4084;Dbxref=Genbank:WP_002209570.1;Name=WP_002209570.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209570.1;transl_table=11 NC_010634.1 RefSeq gene 4544162 4545853 . - . ID=gene4085;Name=YPTS_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20500;old_locus_tag=YPTS_4066 NC_010634.1 Protein Homology CDS 4544162 4545853 . - 0 ID=cds3977;Parent=gene4085;Dbxref=Genbank:WP_011193291.1;Name=WP_011193291.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=WP_011193291.1;transl_table=11 NC_010634.1 RefSeq gene 4546391 4547854 . - . ID=gene4086;Name=YPTS_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20505;old_locus_tag=YPTS_4067 NC_010634.1 Protein Homology CDS 4546391 4547854 . - 0 ID=cds3978;Parent=gene4086;Dbxref=Genbank:WP_002209573.1;Name=WP_002209573.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209573.1;transl_table=11 NC_010634.1 RefSeq gene 4548344 4549747 . - . ID=gene4087;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPTS_RS20510;old_locus_tag=YPTS_4068 NC_010634.1 Protein Homology CDS 4548344 4549747 . - 0 ID=cds3979;Parent=gene4087;Dbxref=Genbank:WP_011193292.1;Name=WP_011193292.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_011193292.1;transl_table=11 NC_010634.1 RefSeq gene 4550114 4551646 . - . ID=gene4088;Name=YPTS_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20515;old_locus_tag=YPTS_4069 NC_010634.1 Protein Homology CDS 4550114 4551646 . - 0 ID=cds3980;Parent=gene4088;Dbxref=Genbank:WP_011193293.1;Name=WP_011193293.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=WP_011193293.1;transl_table=11 NC_010634.1 RefSeq gene 4551643 4553334 . - . ID=gene4089;Name=YPTS_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20520;old_locus_tag=YPTS_4070 NC_010634.1 Protein Homology CDS 4551643 4553334 . - 0 ID=cds3981;Parent=gene4089;Dbxref=Genbank:WP_002209576.1;Name=WP_002209576.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11 NC_010634.1 RefSeq gene 4553998 4554369 . + . ID=gene4090;Name=YPTS_RS20525;end_range=4554369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS20525;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 4553998 4554369 . + 0 ID=cds3982;Parent=gene4090;end_range=4554369,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=pyridoxal-5'-phosphate-dependent protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4554362 4554925 . + . ID=gene4091;Name=YPTS_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20530;old_locus_tag=YPTS_4072 NC_010634.1 Protein Homology CDS 4554362 4554925 . + 0 ID=cds3983;Parent=gene4091;Dbxref=Genbank:WP_032467108.1;Name=WP_032467108.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_032467108.1;transl_table=11 NC_010634.1 RefSeq gene 4555008 4555937 . + . ID=gene4092;Name=YPTS_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20535;old_locus_tag=YPTS_4073 NC_010634.1 Protein Homology CDS 4555008 4555937 . + 0 ID=cds3984;Parent=gene4092;Dbxref=Genbank:WP_002209579.1;Name=WP_002209579.1;gbkey=CDS;product=transporter;protein_id=WP_002209579.1;transl_table=11 NC_010634.1 RefSeq gene 4555939 4557183 . + . ID=gene4093;Name=YPTS_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20540;old_locus_tag=YPTS_4074 NC_010634.1 Protein Homology CDS 4555939 4557183 . + 0 ID=cds3985;Parent=gene4093;Dbxref=Genbank:WP_011193294.1;Name=WP_011193294.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193294.1;transl_table=11 NC_010634.1 RefSeq gene 4557706 4558659 . + . ID=gene4094;Name=YPTS_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20545;old_locus_tag=YPTS_4075 NC_010634.1 Protein Homology CDS 4557706 4558659 . + 0 ID=cds3986;Parent=gene4094;Dbxref=Genbank:WP_002209581.1;Name=WP_002209581.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NC_010634.1 RefSeq gene 4558669 4559628 . + . ID=gene4095;Name=YPTS_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20550;old_locus_tag=YPTS_4076 NC_010634.1 Protein Homology CDS 4558669 4559628 . + 0 ID=cds3987;Parent=gene4095;Dbxref=Genbank:WP_011193295.1;Name=WP_011193295.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_011193295.1;transl_table=11 NC_010634.1 RefSeq gene 4559618 4560625 . + . ID=gene4096;Name=YPTS_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20555;old_locus_tag=YPTS_4077 NC_010634.1 Protein Homology CDS 4559618 4560625 . + 0 ID=cds3988;Parent=gene4096;Dbxref=Genbank:WP_011193296.1;Name=WP_011193296.1;gbkey=CDS;product=enterobactin ABC transporter permease;protein_id=WP_011193296.1;transl_table=11 NC_010634.1 RefSeq gene 4560622 4561380 . + . ID=gene4097;Name=YPTS_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20560;old_locus_tag=YPTS_4078 NC_010634.1 Protein Homology CDS 4560622 4561380 . + 0 ID=cds3989;Parent=gene4097;Dbxref=Genbank:WP_011193297.1;Name=WP_011193297.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_011193297.1;transl_table=11 NC_010634.1 RefSeq gene 4561377 4561877 . - . ID=gene4098;Name=YPTS_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20565;old_locus_tag=YPTS_4079 NC_010634.1 Protein Homology CDS 4561377 4561877 . - 0 ID=cds3990;Parent=gene4098;Dbxref=Genbank:WP_002214364.1;Name=WP_002214364.1;gbkey=CDS;product=toxin Fic;protein_id=WP_002214364.1;transl_table=11 NC_010634.1 RefSeq gene 4561845 4562145 . - . ID=gene4099;Name=YPTS_RS20570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS20570;partial=true;pseudo=true;start_range=.,4561845 NC_010634.1 Protein Homology CDS 4561845 4562145 . - 0 ID=cds3991;Parent=gene4099;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4561845;transl_table=11 NC_010634.1 RefSeq gene 4562168 4562575 . - . ID=gene4100;Name=YPTS_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20575;old_locus_tag=YPTS_4081 NC_010634.1 Protein Homology CDS 4562168 4562575 . - 0 ID=cds3992;Parent=gene4100;Dbxref=Genbank:WP_011193299.1;Name=WP_011193299.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193299.1;transl_table=11 NC_010634.1 RefSeq gene 4563457 4564311 . - . ID=gene4101;Name=YPTS_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20580;old_locus_tag=YPTS_4083 NC_010634.1 Protein Homology CDS 4563457 4564311 . - 0 ID=cds3993;Parent=gene4101;Dbxref=Genbank:WP_032467109.1;Name=WP_032467109.1;gbkey=CDS;product=restriction methylase;protein_id=WP_032467109.1;transl_table=11 NC_010634.1 RefSeq gene 4564538 4564906 . - . ID=gene4102;Name=YPTS_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20585 NC_010634.1 Protein Homology CDS 4564538 4564906 . - 0 ID=cds3994;Parent=gene4102;Dbxref=Genbank:WP_032467110.1;Name=WP_032467110.1;gbkey=CDS;product=toxin YkfI;protein_id=WP_032467110.1;transl_table=11 NC_010634.1 RefSeq gene 4564959 4565294 . - . ID=gene4103;Name=YPTS_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20590;old_locus_tag=YPTS_4085 NC_010634.1 Protein Homology CDS 4564959 4565294 . - 0 ID=cds3995;Parent=gene4103;Dbxref=Genbank:WP_011193303.1;Name=WP_011193303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193303.1;transl_table=11 NC_010634.1 RefSeq gene 4565306 4565785 . - . ID=gene4104;Name=YPTS_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20595;old_locus_tag=YPTS_4086 NC_010634.1 Protein Homology CDS 4565306 4565785 . - 0 ID=cds3996;Parent=gene4104;Dbxref=Genbank:WP_011193304.1;Name=WP_011193304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193304.1;transl_table=11 NC_010634.1 RefSeq gene 4565968 4566588 . - . ID=gene4105;Name=YPTS_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20600;old_locus_tag=YPTS_4087 NC_010634.1 Protein Homology CDS 4565968 4566588 . - 0 ID=cds3997;Parent=gene4105;Dbxref=Genbank:WP_011193305.1;Name=WP_011193305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193305.1;transl_table=11 NC_010634.1 RefSeq gene 4566616 4567170 . - . ID=gene4106;Name=YPTS_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20605;old_locus_tag=YPTS_4088 NC_010634.1 Protein Homology CDS 4566616 4567170 . - 0 ID=cds3998;Parent=gene4106;Dbxref=Genbank:WP_011193306.1;Name=WP_011193306.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193306.1;transl_table=11 NC_010634.1 RefSeq gene 4567418 4568089 . - . ID=gene4107;Name=YPTS_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20610;old_locus_tag=YPTS_4089 NC_010634.1 Protein Homology CDS 4567418 4568089 . - 0 ID=cds3999;Parent=gene4107;Dbxref=Genbank:WP_012414124.1;Name=WP_012414124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414124.1;transl_table=11 NC_010634.1 RefSeq gene 4568143 4568472 . - . ID=gene4108;Name=YPTS_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20615;old_locus_tag=YPTS_4090 NC_010634.1 Protein Homology CDS 4568143 4568472 . - 0 ID=cds4000;Parent=gene4108;Dbxref=Genbank:WP_011193308.1;Name=WP_011193308.1;gbkey=CDS;product=transposase;protein_id=WP_011193308.1;transl_table=11 NC_010634.1 RefSeq gene 4569101 4569349 . + . ID=gene4109;Name=YPTS_RS20620;end_range=4569349,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS20620;old_locus_tag=YPTS_4091;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 4569101 4569349 . + 0 ID=cds4001;Parent=gene4109;end_range=4569349,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq repeat_region 4569336 4571292 . + . ID=id314;gbkey=repeat_region NC_010634.1 RefSeq gene 4569403 4570182 . - . ID=gene4110;Name=YPTS_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20625;old_locus_tag=YPTS_4092 NC_010634.1 Protein Homology CDS 4569403 4570182 . - 0 ID=cds4002;Parent=gene4110;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_010634.1 RefSeq gene 4570182 4571204 . - . ID=gene4111;Name=YPTS_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20630;old_locus_tag=YPTS_4093 NC_010634.1 Protein Homology CDS 4570182 4571204 . - 0 ID=cds4003;Parent=gene4111;Dbxref=Genbank:WP_012413427.1;Name=WP_012413427.1;gbkey=CDS;product=transposase;protein_id=WP_012413427.1;transl_table=11 NC_010634.1 RefSeq gene 4571863 4572777 . - . ID=gene4112;Name=YPTS_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20635;old_locus_tag=YPTS_4095 NC_010634.1 Protein Homology CDS 4571863 4572777 . - 0 ID=cds4004;Parent=gene4112;Dbxref=Genbank:WP_012414127.1;Name=WP_012414127.1;gbkey=CDS;product=restriction endonuclease;protein_id=WP_012414127.1;transl_table=11 NC_010634.1 RefSeq gene 4572913 4573635 . - . ID=gene4113;Name=YPTS_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20640;old_locus_tag=YPTS_4096 NC_010634.1 Protein Homology CDS 4572913 4573635 . - 0 ID=cds4005;Parent=gene4113;Dbxref=Genbank:WP_024063557.1;Name=WP_024063557.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063557.1;transl_table=11 NC_010634.1 RefSeq gene 4573654 4576932 . - . ID=gene4114;Name=YPTS_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20645;old_locus_tag=YPTS_4097 NC_010634.1 Protein Homology CDS 4573654 4576932 . - 0 ID=cds4006;Parent=gene4114;Dbxref=Genbank:WP_011193311.1;Name=WP_011193311.1;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=WP_011193311.1;transl_table=11 NC_010634.1 RefSeq gene 4576929 4577975 . - . ID=gene4115;Name=YPTS_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20650;old_locus_tag=YPTS_4098 NC_010634.1 Protein Homology CDS 4576929 4577975 . - 0 ID=cds4007;Parent=gene4115;Dbxref=Genbank:WP_011193312.1;Name=WP_011193312.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_011193312.1;transl_table=11 NC_010634.1 RefSeq gene 4577972 4579201 . - . ID=gene4116;Name=YPTS_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20655;old_locus_tag=YPTS_4099 NC_010634.1 Protein Homology CDS 4577972 4579201 . - 0 ID=cds4008;Parent=gene4116;Dbxref=Genbank:WP_011193313.1;Name=WP_011193313.1;gbkey=CDS;product=restriction endonuclease;protein_id=WP_011193313.1;transl_table=11 NC_010634.1 RefSeq gene 4579191 4580714 . - . ID=gene4117;Name=YPTS_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20660;old_locus_tag=YPTS_4100 NC_010634.1 Protein Homology CDS 4579191 4580714 . - 0 ID=cds4009;Parent=gene4117;Dbxref=Genbank:WP_011193314.1;Name=WP_011193314.1;gbkey=CDS;product=type I restriction-modification protein subunit M;protein_id=WP_011193314.1;transl_table=11 NC_010634.1 RefSeq gene 4580721 4581299 . - . ID=gene4118;Name=YPTS_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20665;old_locus_tag=YPTS_4101 NC_010634.1 Protein Homology CDS 4580721 4581299 . - 0 ID=cds4010;Parent=gene4118;Dbxref=Genbank:WP_011193315.1;Name=WP_011193315.1;gbkey=CDS;product=restriction endonuclease subunit S;protein_id=WP_011193315.1;transl_table=11 NC_010634.1 RefSeq gene 4581355 4581621 . - . ID=gene4119;Name=YPTS_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20670;old_locus_tag=YPTS_4102 NC_010634.1 Protein Homology CDS 4581355 4581621 . - 0 ID=cds4011;Parent=gene4119;Dbxref=Genbank:WP_012414128.1;Name=WP_012414128.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414128.1;transl_table=11 NC_010634.1 RefSeq gene 4581939 4583153 . - . ID=gene4120;Name=YPTS_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20675;old_locus_tag=YPTS_4103 NC_010634.1 Protein Homology CDS 4581939 4583153 . - 0 ID=cds4012;Parent=gene4120;Dbxref=Genbank:WP_011193318.1;Name=WP_011193318.1;gbkey=CDS;product=integrase;protein_id=WP_011193318.1;transl_table=11 NC_010634.1 RefSeq gene 4583622 4584815 . - . ID=gene4121;Name=YPTS_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20680;old_locus_tag=YPTS_4104 NC_010634.1 Protein Homology CDS 4583622 4584815 . - 0 ID=cds4013;Parent=gene4121;Dbxref=Genbank:WP_002209588.1;Name=WP_002209588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209588.1;transl_table=11 NC_010634.1 RefSeq gene 4584905 4586089 . - . ID=gene4122;Name=YPTS_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20685;old_locus_tag=YPTS_4105 NC_010634.1 Protein Homology CDS 4584905 4586089 . - 0 ID=cds4014;Parent=gene4122;Dbxref=Genbank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;product=xylose ABC transporter permease;protein_id=WP_002209589.1;transl_table=11 NC_010634.1 RefSeq gene 4586076 4587608 . - . ID=gene4123;Name=YPTS_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20690;old_locus_tag=YPTS_4106 NC_010634.1 Protein Homology CDS 4586076 4587608 . - 0 ID=cds4015;Parent=gene4123;Dbxref=Genbank:WP_002209590.1;Name=WP_002209590.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=WP_002209590.1;transl_table=11 NC_010634.1 RefSeq gene 4587816 4588811 . - . ID=gene4124;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=YPTS_RS20695;old_locus_tag=YPTS_4107 NC_010634.1 Protein Homology CDS 4587816 4588811 . - 0 ID=cds4016;Parent=gene4124;Dbxref=Genbank:WP_011193319.1;Name=WP_011193319.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;product=xylose ABC transporter substrate-binding protein;protein_id=WP_011193319.1;transl_table=11 NC_010634.1 RefSeq gene 4589274 4590593 . + . ID=gene4125;Name=YPTS_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20700;old_locus_tag=YPTS_4108 NC_010634.1 Protein Homology CDS 4589274 4590593 . + 0 ID=cds4017;Parent=gene4125;Dbxref=Genbank:WP_002209593.1;Name=WP_002209593.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NC_010634.1 RefSeq gene 4590717 4592171 . + . ID=gene4126;Name=YPTS_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20705;old_locus_tag=YPTS_4109 NC_010634.1 Protein Homology CDS 4590717 4592171 . + 0 ID=cds4018;Parent=gene4126;Dbxref=Genbank:WP_011193320.1;Name=WP_011193320.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulokinase;protein_id=WP_011193320.1;transl_table=11 NC_010634.1 RefSeq gene 4592270 4593256 . - . ID=gene4127;Name=YPTS_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20710;old_locus_tag=YPTS_4110 NC_010634.1 Protein Homology CDS 4592270 4593256 . - 0 ID=cds4019;Parent=gene4127;Dbxref=Genbank:WP_002209595.1;Name=WP_002209595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209595.1;transl_table=11 NC_010634.1 RefSeq gene 4593295 4594062 . - . ID=gene4128;Name=YPTS_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20715;old_locus_tag=YPTS_4111 NC_010634.1 Protein Homology CDS 4593295 4594062 . - 0 ID=cds4020;Parent=gene4128;Dbxref=Genbank:WP_002209596.1;Name=WP_002209596.1;gbkey=CDS;product=fimbrial chaperone protein StdC;protein_id=WP_002209596.1;transl_table=11 NC_010634.1 RefSeq gene 4594155 4596647 . - . ID=gene4129;Name=YPTS_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20720;old_locus_tag=YPTS_4112 NC_010634.1 Protein Homology CDS 4594155 4596647 . - 0 ID=cds4021;Parent=gene4129;Dbxref=Genbank:WP_012105957.1;Name=WP_012105957.1;gbkey=CDS;product=O-succinylbenzoate--CoA ligase;protein_id=WP_012105957.1;transl_table=11 NC_010634.1 RefSeq gene 4596723 4597280 . - . ID=gene4130;Name=YPTS_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20725;old_locus_tag=YPTS_4113 NC_010634.1 Protein Homology CDS 4596723 4597280 . - 0 ID=cds4022;Parent=gene4130;Dbxref=Genbank:WP_002209597.1;Name=WP_002209597.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209597.1;transl_table=11 NC_010634.1 RefSeq gene 4598162 4599154 . - . ID=gene4131;Name=YPTS_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20730;old_locus_tag=YPTS_4114 NC_010634.1 Protein Homology CDS 4598162 4599154 . - 0 ID=cds4023;Parent=gene4131;Dbxref=Genbank:WP_011193324.1;Name=WP_011193324.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=O-acetyltransferase;protein_id=WP_011193324.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4599458 4600899 . + . ID=id315;gbkey=repeat_region NC_010634.1 RefSeq gene 4599514 4600029 . + . ID=gene4132;Name=YPTS_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20735;old_locus_tag=YPTS_4115 NC_010634.1 Protein Homology CDS 4599514 4600029 . + 0 ID=cds4024;Parent=gene4132;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_010634.1 RefSeq gene 4600083 4600868 . + . ID=gene4133;Name=YPTS_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20740;old_locus_tag=YPTS_4116 NC_010634.1 Protein Homology CDS 4600083 4600868 . + 0 ID=cds4025;Parent=gene4133;Dbxref=Genbank:WP_011193326.1;Name=WP_011193326.1;gbkey=CDS;product=integrase;protein_id=WP_011193326.1;transl_table=11 NC_010634.1 RefSeq gene 4601027 4601980 . - . ID=gene4134;Name=YPTS_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20745;old_locus_tag=YPTS_4117 NC_010634.1 Protein Homology CDS 4601027 4601980 . - 0 ID=cds4026;Parent=gene4134;Dbxref=Genbank:WP_011193327.1;Name=WP_011193327.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_011193327.1;transl_table=11 NC_010634.1 RefSeq gene 4601974 4602936 . - . ID=gene4135;Name=YPTS_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20750;old_locus_tag=YPTS_4118 NC_010634.1 Protein Homology CDS 4601974 4602936 . - 0 ID=cds4027;Parent=gene4135;Dbxref=Genbank:WP_011193328.1;Name=WP_011193328.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193328.1;transl_table=11 NC_010634.1 RefSeq gene 4603144 4604445 . + . ID=gene4136;Name=YPTS_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20755;old_locus_tag=YPTS_4119 NC_010634.1 Protein Homology CDS 4603144 4604445 . + 0 ID=cds4028;Parent=gene4136;Dbxref=Genbank:WP_011193329.1;Name=WP_011193329.1;gbkey=CDS;product=biopolymer transporter Tol;protein_id=WP_011193329.1;transl_table=11 NC_010634.1 RefSeq gene 4604488 4604823 . - . ID=gene4137;Name=YPTS_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20760;old_locus_tag=YPTS_4120 NC_010634.1 Protein Homology CDS 4604488 4604823 . - 0 ID=cds4029;Parent=gene4137;Dbxref=Genbank:WP_011193330.1;Name=WP_011193330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193330.1;transl_table=11 NC_010634.1 RefSeq gene 4605191 4605604 . + . ID=gene4138;Name=YPTS_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20765;old_locus_tag=YPTS_4121 NC_010634.1 Protein Homology CDS 4605191 4605604 . + 0 ID=cds4030;Parent=gene4138;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11 NC_010634.1 RefSeq gene 4605885 4606349 . + . ID=gene4139;Name=YPTS_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20770;old_locus_tag=YPTS_4122 NC_010634.1 Protein Homology CDS 4605885 4606349 . + 0 ID=cds4031;Parent=gene4139;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11 NC_010634.1 RefSeq gene 4606722 4608380 . + . ID=gene4140;Name=YPTS_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20775;old_locus_tag=YPTS_4123 NC_010634.1 Protein Homology CDS 4606722 4608380 . + 0 ID=cds4032;Parent=gene4140;Dbxref=Genbank:WP_011193331.1;Name=WP_011193331.1;gbkey=CDS;product=transporter;protein_id=WP_011193331.1;transl_table=11 NC_010634.1 RefSeq gene 4608493 4609758 . - . ID=gene4141;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YPTS_RS20780;old_locus_tag=YPTS_4124 NC_010634.1 Protein Homology CDS 4608493 4609758 . - 0 ID=cds4033;Parent=gene4141;Dbxref=Genbank:WP_002228155.1;Name=WP_002228155.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_002228155.1;transl_table=11 NC_010634.1 RefSeq gene 4610214 4610657 . - . ID=gene4142;Name=YPTS_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20785;old_locus_tag=YPTS_4125 NC_010634.1 Protein Homology CDS 4610214 4610657 . - 0 ID=cds4034;Parent=gene4142;Dbxref=Genbank:WP_011193332.1;Name=WP_011193332.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193332.1;transl_table=11 NC_010634.1 RefSeq gene 4611062 4613125 . - . ID=gene4143;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YPTS_RS20790;old_locus_tag=YPTS_4126 NC_010634.1 Protein Homology CDS 4611062 4613125 . - 0 ID=cds4035;Parent=gene4143;Dbxref=Genbank:WP_011193333.1;Name=WP_011193333.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_011193333.1;transl_table=11 NC_010634.1 RefSeq gene 4613414 4614394 . - . ID=gene4144;Name=YPTS_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20795;old_locus_tag=YPTS_4127 NC_010634.1 Protein Homology CDS 4613414 4614394 . - 0 ID=cds4036;Parent=gene4144;Dbxref=Genbank:WP_002209630.1;Name=WP_002209630.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_002209630.1;transl_table=11 NC_010634.1 RefSeq gene 4614931 4615575 . + . ID=gene4145;Name=YPTS_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20800;old_locus_tag=YPTS_4128 NC_010634.1 Protein Homology CDS 4614931 4615575 . + 0 ID=cds4037;Parent=gene4145;Dbxref=Genbank:WP_011193334.1;Name=WP_011193334.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011193334.1;transl_table=11 NC_010634.1 RefSeq gene 4615706 4616365 . - . ID=gene4146;Name=YPTS_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20805;old_locus_tag=YPTS_4129 NC_010634.1 Protein Homology CDS 4615706 4616365 . - 0 ID=cds4038;Parent=gene4146;Dbxref=Genbank:WP_002209628.1;Name=WP_002209628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209628.1;transl_table=11 NC_010634.1 RefSeq gene 4616724 4617179 . - . ID=gene4147;Name=YPTS_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20810;old_locus_tag=YPTS_4131 NC_010634.1 Protein Homology CDS 4616724 4617179 . - 0 ID=cds4039;Parent=gene4147;Dbxref=Genbank:WP_011193335.1;Name=WP_011193335.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_011193335.1;transl_table=11 NC_010634.1 RefSeq gene 4617176 4617748 . - . ID=gene4148;Name=YPTS_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20815;old_locus_tag=YPTS_4132 NC_010634.1 Protein Homology CDS 4617176 4617748 . - 0 ID=cds4040;Parent=gene4148;Dbxref=Genbank:WP_002209626.1;Name=WP_002209626.1;gbkey=CDS;product=DNA-3-methyladenine glycosylase;protein_id=WP_002209626.1;transl_table=11 NC_010634.1 RefSeq gene 4618114 4619028 . + . ID=gene4149;Name=YPTS_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20820;old_locus_tag=YPTS_4133 NC_010634.1 Protein Homology CDS 4618114 4619028 . + 0 ID=cds4041;Parent=gene4149;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NC_010634.1 RefSeq gene 4619038 4621107 . + . ID=gene4150;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YPTS_RS20825;old_locus_tag=YPTS_4134 NC_010634.1 Protein Homology CDS 4619038 4621107 . + 0 ID=cds4042;Parent=gene4150;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4621154 4621328 . + . ID=id316;gbkey=repeat_region NC_010634.1 RefSeq gene 4621564 4622283 . + . ID=gene4151;Name=YPTS_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20830;old_locus_tag=YPTS_4136 NC_010634.1 Protein Homology CDS 4621564 4622283 . + 0 ID=cds4043;Parent=gene4151;Dbxref=Genbank:WP_012105968.1;Name=WP_012105968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105968.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4622317 4622491 . + . ID=id317;gbkey=repeat_region NC_010634.1 RefSeq gene 4622933 4624864 . + . ID=gene4152;Name=YPTS_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20835;old_locus_tag=YPTS_4138 NC_010634.1 Protein Homology CDS 4622933 4624864 . + 0 ID=cds4044;Parent=gene4152;Dbxref=Genbank:WP_011193337.1;Name=WP_011193337.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannitol transporter subunit IIABC;protein_id=WP_011193337.1;transl_table=11 NC_010634.1 RefSeq gene 4625001 4626164 . + . ID=gene4153;Name=YPTS_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20840;old_locus_tag=YPTS_4139 NC_010634.1 Protein Homology CDS 4625001 4626164 . + 0 ID=cds4045;Parent=gene4153;Dbxref=Genbank:WP_011193338.1;Name=WP_011193338.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_011193338.1;transl_table=11 NC_010634.1 RefSeq gene 4626371 4626925 . + . ID=gene4154;Name=YPTS_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20845;old_locus_tag=YPTS_4140 NC_010634.1 Protein Homology CDS 4626371 4626925 . + 0 ID=cds4046;Parent=gene4154;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11 NC_010634.1 RefSeq gene 4627174 4627530 . + . ID=gene4155;Name=YPTS_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20850;old_locus_tag=YPTS_4142 NC_010634.1 Protein Homology CDS 4627174 4627530 . + 0 ID=cds4047;Parent=gene4155;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11 NC_010634.1 RefSeq gene 4627695 4628171 . - . ID=gene4156;Name=YPTS_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20855;old_locus_tag=YPTS_4143 NC_010634.1 Protein Homology CDS 4627695 4628171 . - 0 ID=cds4048;Parent=gene4156;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11 NC_010634.1 RefSeq gene 4628705 4629037 . - . ID=gene4157;Name=YPTS_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20860;old_locus_tag=YPTS_4145 NC_010634.1 Protein Homology CDS 4628705 4629037 . - 0 ID=cds4049;Parent=gene4157;Dbxref=Genbank:WP_011193339.1;Name=WP_011193339.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193339.1;transl_table=11 NC_010634.1 RefSeq gene 4629227 4631176 . - . ID=gene4158;Name=YPTS_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20865;old_locus_tag=YPTS_4146 NC_010634.1 Protein Homology CDS 4629227 4631176 . - 0 ID=cds4050;Parent=gene4158;Dbxref=Genbank:WP_011193340.1;Name=WP_011193340.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_011193340.1;transl_table=11 NC_010634.1 RefSeq gene 4631520 4632143 . - . ID=gene4159;Name=YPTS_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20870;old_locus_tag=YPTS_4147 NC_010634.1 Protein Homology CDS 4631520 4632143 . - 0 ID=cds4051;Parent=gene4159;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11 NC_010634.1 RefSeq gene 4632577 4633401 . - . ID=gene4160;Name=YPTS_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20875;old_locus_tag=YPTS_4148 NC_010634.1 Protein Homology CDS 4632577 4633401 . - 0 ID=cds4052;Parent=gene4160;Dbxref=Genbank:WP_011193341.1;Name=WP_011193341.1;gbkey=CDS;product=protein FdhD;protein_id=WP_011193341.1;transl_table=11 NC_010634.1 RefSeq gene 4633598 4634185 . + . ID=gene4161;Name=YPTS_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20880;old_locus_tag=YPTS_4149 NC_010634.1 Protein Homology CDS 4633598 4634185 . + 0 ID=cds4053;Parent=gene4161;Dbxref=Genbank:WP_012303326.1;Name=WP_012303326.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_012303326.1;transl_table=11 NC_010634.1 RefSeq gene 4634234 4636645 . + . ID=gene4162;Name=YPTS_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20885;old_locus_tag=YPTS_4150 NC_010634.1 Protein Homology CDS 4634234 4636645 . + 0 ID=cds4054;Parent=gene4162;Dbxref=Genbank:WP_012414133.1;Name=WP_012414133.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_012414133.1;transl_table=11 NC_010634.1 RefSeq gene 4636658 4637629 . + . ID=gene4163;Name=YPTS_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20890;old_locus_tag=YPTS_4151 NC_010634.1 Protein Homology CDS 4636658 4637629 . + 0 ID=cds4055;Parent=gene4163;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11 NC_010634.1 RefSeq gene 4637626 4638300 . + . ID=gene4164;Name=YPTS_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20895;old_locus_tag=YPTS_4152 NC_010634.1 Protein Homology CDS 4637626 4638300 . + 0 ID=cds4056;Parent=gene4164;Dbxref=Genbank:WP_011193343.1;Name=WP_011193343.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_011193343.1;transl_table=11 NC_010634.1 RefSeq gene 4638300 4639229 . + . ID=gene4165;Name=YPTS_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20900;old_locus_tag=YPTS_4153 NC_010634.1 Protein Homology CDS 4638300 4639229 . + 0 ID=cds4057;Parent=gene4165;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11 NC_010634.1 RefSeq gene 4639425 4640813 . + . ID=gene4166;Name=YPTS_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20905;old_locus_tag=YPTS_4154 NC_010634.1 Protein Homology CDS 4639425 4640813 . + 0 ID=cds4058;Parent=gene4166;Dbxref=Genbank:WP_011193344.1;Name=WP_011193344.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_011193344.1;transl_table=11 NC_010634.1 RefSeq gene 4640810 4642783 . + . ID=gene4167;Name=YPTS_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20910;old_locus_tag=YPTS_4155 NC_010634.1 Protein Homology CDS 4640810 4642783 . + 0 ID=cds4059;Parent=gene4167;Dbxref=Genbank:WP_011193345.1;Name=WP_011193345.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_011193345.1;transl_table=11 NC_010634.1 RefSeq gene 4642790 4643254 . - . ID=gene4168;Name=YPTS_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20915 NC_010634.1 Protein Homology CDS 4642790 4643254 . - 0 ID=cds4060;Parent=gene4168;Dbxref=Genbank:WP_041175483.1;Name=WP_041175483.1;gbkey=CDS;product=transposase;protein_id=WP_041175483.1;transl_table=11 NC_010634.1 RefSeq gene 4643543 4643710 . + . ID=gene4169;Name=YPTS_RS20920;end_range=4643710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS20920;old_locus_tag=YPTS_4157;partial=true;pseudo=true NC_010634.1 Protein Homology CDS 4643543 4643710 . + 0 ID=cds4061;Parent=gene4169;end_range=4643710,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_010634.1 RefSeq gene 4643743 4643973 . - . ID=gene4170;Name=YPTS_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21655 NC_010634.1 Protein Homology CDS 4643743 4643973 . - 0 ID=cds4062;Parent=gene4170;Dbxref=Genbank:WP_049772374.1;Name=WP_049772374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049772374.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4643872 4649778 . + . ID=id318;gbkey=repeat_region NC_010634.1 RefSeq gene 4644190 4644305 . - . ID=gene4171;Name=YPTS_RS20925;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS20925;old_locus_tag=YPTS_R0105 NC_010634.1 cmsearch rRNA 4644190 4644305 . - . ID=rna100;Parent=gene4171;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 cmsearch exon 4644190 4644305 . - . ID=id319;Parent=rna100;gbkey=rRNA;product=5S ribosomal RNA NC_010634.1 RefSeq gene 4644398 4647331 . - . ID=gene4172;Name=YPTS_RS20930;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS20930;old_locus_tag=YPTS_R0095 NC_010634.1 RefSeq rRNA 4644398 4647331 . - . ID=rna101;Parent=gene4172;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq exon 4644398 4647331 . - . ID=id320;Parent=rna101;gbkey=rRNA;product=23S ribosomal RNA NC_010634.1 RefSeq gene 4647575 4647650 . - . ID=gene4173;Name=YPTS_RS20935;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPTS_RS20935;old_locus_tag=YPTS_R0051 NC_010634.1 tRNAscan-SE tRNA 4647575 4647650 . - . ID=rna102;Parent=gene4173;anticodon=(pos:complement(4647614..4647616));gbkey=tRNA;product=tRNA-Glu NC_010634.1 tRNAscan-SE exon 4647575 4647650 . - . ID=id321;Parent=rna102;anticodon=(pos:complement(4647614..4647616));gbkey=tRNA;product=tRNA-Glu NC_010634.1 RefSeq gene 4647784 4649332 . - . ID=gene4174;Name=YPTS_RS20940;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPTS_RS20940;old_locus_tag=YPTS_R0088 NC_010634.1 RefSeq rRNA 4647784 4649332 . - . ID=rna103;Parent=gene4174;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq exon 4647784 4649332 . - . ID=id322;Parent=rna103;gbkey=rRNA;product=16S ribosomal RNA NC_010634.1 RefSeq gene 4649889 4650578 . + . ID=gene4175;Name=YPTS_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20950;old_locus_tag=YPTS_4160 NC_010634.1 Protein Homology CDS 4649889 4650578 . + 0 ID=cds4063;Parent=gene4175;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NC_010634.1 RefSeq gene 4650658 4652082 . + . ID=gene4176;Name=YPTS_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20955;old_locus_tag=YPTS_4161 NC_010634.1 Protein Homology CDS 4650658 4652082 . + 0 ID=cds4064;Parent=gene4176;Dbxref=Genbank:WP_002212250.1;Name=WP_002212250.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002212250.1;transl_table=11 NC_010634.1 RefSeq gene 4652079 4652249 . - . ID=gene4177;Name=YPTS_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20960;old_locus_tag=YPTS_4162 NC_010634.1 Protein Homology CDS 4652079 4652249 . - 0 ID=cds4065;Parent=gene4177;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11 NC_010634.1 RefSeq gene 4652302 4653228 . - . ID=gene4178;Name=YPTS_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20965;old_locus_tag=YPTS_4163 NC_010634.1 Protein Homology CDS 4652302 4653228 . - 0 ID=cds4066;Parent=gene4178;Dbxref=Genbank:WP_011191441.1;Name=WP_011191441.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_011191441.1;transl_table=11 NC_010634.1 RefSeq gene 4653279 4653698 . - . ID=gene4179;Name=YPTS_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20970;old_locus_tag=YPTS_4164 NC_010634.1 Protein Homology CDS 4653279 4653698 . - 0 ID=cds4067;Parent=gene4179;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NC_010634.1 RefSeq gene 4653921 4655789 . - . ID=gene4180;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=YPTS_RS20975;old_locus_tag=YPTS_4165 NC_010634.1 Protein Homology CDS 4653921 4655789 . - 0 ID=cds4068;Parent=gene4180;Dbxref=Genbank:WP_011191440.1;Name=WP_011191440.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_011191440.1;transl_table=11 NC_010634.1 RefSeq gene 4656063 4657601 . + . ID=gene4181;Name=YPTS_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20980;old_locus_tag=YPTS_4166 NC_010634.1 Protein Homology CDS 4656063 4657601 . + 0 ID=cds4069;Parent=gene4181;Dbxref=Genbank:WP_011191439.1;Name=WP_011191439.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase RavA;protein_id=WP_011191439.1;transl_table=11 NC_010634.1 RefSeq gene 4657605 4659071 . + . ID=gene4182;Name=YPTS_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20985;old_locus_tag=YPTS_4167 NC_010634.1 Protein Homology CDS 4657605 4659071 . + 0 ID=cds4070;Parent=gene4182;Dbxref=Genbank:WP_002212255.1;Name=WP_002212255.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_002212255.1;transl_table=11 NC_010634.1 RefSeq gene 4659170 4660162 . - . ID=gene4183;Name=YPTS_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20990;old_locus_tag=YPTS_4168 NC_010634.1 Protein Homology CDS 4659170 4660162 . - 0 ID=cds4071;Parent=gene4183;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NC_010634.1 RefSeq gene 4660332 4660793 . + . ID=gene4184;Name=YPTS_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS20995;old_locus_tag=YPTS_4169 NC_010634.1 Protein Homology CDS 4660332 4660793 . + 0 ID=cds4072;Parent=gene4184;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11 NC_010634.1 RefSeq gene 4660886 4661326 . + . ID=gene4185;Name=YPTS_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21000;old_locus_tag=YPTS_4170 NC_010634.1 Protein Homology CDS 4660886 4661326 . + 0 ID=cds4073;Parent=gene4185;Dbxref=Genbank:WP_002212258.1;Name=WP_002212258.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NC_010634.1 RefSeq gene 4661707 4663596 . + . ID=gene4186;Name=YPTS_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21005;old_locus_tag=YPTS_4171 NC_010634.1 Protein Homology CDS 4661707 4663596 . + 0 ID=cds4074;Parent=gene4186;Dbxref=Genbank:WP_002212259.1;Name=WP_002212259.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 NC_010634.1 RefSeq gene 4663741 4664361 . + . ID=gene4187;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YPTS_RS21010;old_locus_tag=YPTS_4172 NC_010634.1 Protein Homology CDS 4663741 4664361 . + 0 ID=cds4075;Parent=gene4187;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11 NC_010634.1 RefSeq gene 4665028 4665411 . + . ID=gene4188;Name=YPTS_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21015;old_locus_tag=YPTS_4173 NC_010634.1 Protein Homology CDS 4665028 4665411 . + 0 ID=cds4076;Parent=gene4188;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NC_010634.1 RefSeq gene 4665451 4666275 . + . ID=gene4189;Name=YPTS_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21020;old_locus_tag=YPTS_4174 NC_010634.1 Protein Homology CDS 4665451 4666275 . + 0 ID=cds4077;Parent=gene4189;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11 NC_010634.1 RefSeq gene 4666325 4666564 . + . ID=gene4190;Name=YPTS_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21025;old_locus_tag=YPTS_4175 NC_010634.1 Protein Homology CDS 4666325 4666564 . + 0 ID=cds4078;Parent=gene4190;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NC_010634.1 RefSeq gene 4666626 4667096 . + . ID=gene4191;Name=YPTS_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21030;old_locus_tag=YPTS_4176 NC_010634.1 Protein Homology CDS 4666626 4667096 . + 0 ID=cds4079;Parent=gene4191;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11 NC_010634.1 RefSeq gene 4667111 4667644 . + . ID=gene4192;Name=YPTS_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21035;old_locus_tag=YPTS_4177 NC_010634.1 Protein Homology CDS 4667111 4667644 . + 0 ID=cds4080;Parent=gene4192;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NC_010634.1 RefSeq gene 4667659 4669200 . + . ID=gene4193;Name=YPTS_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21040;old_locus_tag=YPTS_4178 NC_010634.1 Protein Homology CDS 4667659 4669200 . + 0 ID=cds4081;Parent=gene4193;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NC_010634.1 RefSeq gene 4669262 4670125 . + . ID=gene4194;Name=YPTS_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21045;old_locus_tag=YPTS_4179 NC_010634.1 Protein Homology CDS 4669262 4670125 . + 0 ID=cds4082;Parent=gene4194;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NC_010634.1 RefSeq gene 4670281 4671663 . + . ID=gene4195;Name=YPTS_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21050;old_locus_tag=YPTS_4180 NC_010634.1 Protein Homology CDS 4670281 4671663 . + 0 ID=cds4083;Parent=gene4195;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NC_010634.1 RefSeq gene 4671685 4672107 . + . ID=gene4196;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=YPTS_RS21055;old_locus_tag=YPTS_4181 NC_010634.1 Protein Homology CDS 4671685 4672107 . + 0 ID=cds4084;Parent=gene4196;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11 NC_010634.1 RefSeq gene 4672726 4674096 . + . ID=gene4197;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YPTS_RS21060;old_locus_tag=YPTS_4182 NC_010634.1 Protein Homology CDS 4672726 4674096 . + 0 ID=cds4085;Parent=gene4197;Dbxref=Genbank:WP_002215550.1;Name=WP_002215550.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_002215550.1;transl_table=11 NC_010634.1 RefSeq gene 4674297 4676126 . + . ID=gene4198;Name=YPTS_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21065;old_locus_tag=YPTS_4184 NC_010634.1 Protein Homology CDS 4674297 4676126 . + 0 ID=cds4086;Parent=gene4198;Dbxref=Genbank:WP_002215552.1;Name=WP_002215552.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_002215552.1;transl_table=11 NC_010634.1 RefSeq gene 4676609 4677649 . + . ID=gene4199;Name=YPTS_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21070;old_locus_tag=YPTS_4186 NC_010634.1 Protein Homology CDS 4676609 4677649 . + 0 ID=cds4087;Parent=gene4199;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11 NC_010634.1 RefSeq gene 4677878 4678834 . + . ID=gene4200;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YPTS_RS21075;old_locus_tag=YPTS_4187 NC_010634.1 Protein Homology CDS 4677878 4678834 . + 0 ID=cds4088;Parent=gene4200;Dbxref=Genbank:WP_002215558.1;Name=WP_002215558.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002215558.1;transl_table=11 NC_010634.1 RefSeq gene 4678836 4679723 . + . ID=gene4201;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPTS_RS21080;old_locus_tag=YPTS_4188 NC_010634.1 Protein Homology CDS 4678836 4679723 . + 0 ID=cds4089;Parent=gene4201;Dbxref=Genbank:WP_002215560.1;Name=WP_002215560.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_002215560.1;transl_table=11 NC_010634.1 RefSeq gene 4679804 4680580 . + . ID=gene4202;Name=YPTS_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21085;old_locus_tag=YPTS_4189 NC_010634.1 Protein Homology CDS 4679804 4680580 . + 0 ID=cds4090;Parent=gene4202;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11 NC_010634.1 RefSeq gene 4680668 4681390 . + . ID=gene4203;Name=YPTS_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21090;old_locus_tag=YPTS_4190 NC_010634.1 Protein Homology CDS 4680668 4681390 . + 0 ID=cds4091;Parent=gene4203;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11 NC_010634.1 RefSeq gene 4681686 4682357 . + . ID=gene4204;Name=YPTS_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21095;old_locus_tag=YPTS_4191 NC_010634.1 Protein Homology CDS 4681686 4682357 . + 0 ID=cds4092;Parent=gene4204;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11 NC_010634.1 RefSeq gene 4682577 4683431 . + . ID=gene4205;Name=YPTS_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21100;old_locus_tag=YPTS_4192 NC_010634.1 Protein Homology CDS 4682577 4683431 . + 0 ID=cds4093;Parent=gene4205;Dbxref=Genbank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11 NC_010634.1 RefSeq gene 4683614 4684351 . + . ID=gene4206;Name=YPTS_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21105;old_locus_tag=YPTS_4193 NC_010634.1 Protein Homology CDS 4683614 4684351 . + 0 ID=cds4094;Parent=gene4206;Dbxref=Genbank:WP_002215571.1;Name=WP_002215571.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215571.1;transl_table=11 NC_010634.1 RefSeq gene 4684353 4685108 . + . ID=gene4207;Name=YPTS_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21110;old_locus_tag=YPTS_4194 NC_010634.1 Protein Homology CDS 4684353 4685108 . + 0 ID=cds4095;Parent=gene4207;Dbxref=Genbank:WP_011193355.1;Name=WP_011193355.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_011193355.1;transl_table=11 NC_010634.1 RefSeq gene 4685143 4685811 . - . ID=gene4208;Name=YPTS_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21115;old_locus_tag=YPTS_4195 NC_010634.1 Protein Homology CDS 4685143 4685811 . - 0 ID=cds4096;Parent=gene4208;Dbxref=Genbank:WP_011193354.1;Name=WP_011193354.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_011193354.1;transl_table=11 NC_010634.1 RefSeq repeat_region 4685913 4686085 . + . ID=id323;gbkey=repeat_region NC_010634.1 RefSeq gene 4686304 4687632 . + . ID=gene4209;Name=YPTS_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21120;old_locus_tag=YPTS_4196 NC_010634.1 Protein Homology CDS 4686304 4687632 . + 0 ID=cds4097;Parent=gene4209;Dbxref=Genbank:WP_002215577.1;Name=WP_002215577.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_002215577.1;transl_table=11 NC_010634.1 RefSeq gene 4688177 4688797 . + . ID=gene4210;Name=YPTS_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21125;old_locus_tag=YPTS_4197 NC_010634.1 Protein Homology CDS 4688177 4688797 . + 0 ID=cds4098;Parent=gene4210;Dbxref=Genbank:WP_011193352.1;Name=WP_011193352.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193352.1;transl_table=11 NC_010634.1 RefSeq gene 4688859 4689140 . + . ID=gene4211;Name=YPTS_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21130;old_locus_tag=YPTS_4198 NC_010634.1 Protein Homology CDS 4688859 4689140 . + 0 ID=cds4099;Parent=gene4211;Dbxref=Genbank:WP_011193351.1;Name=WP_011193351.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193351.1;transl_table=11 NC_010634.1 RefSeq gene 4689609 4690808 . - . ID=gene4212;Name=YPTS_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21135;old_locus_tag=YPTS_4200 NC_010634.1 Protein Homology CDS 4689609 4690808 . - 0 ID=cds4100;Parent=gene4212;Dbxref=Genbank:WP_002215588.1;Name=WP_002215588.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_002215588.1;transl_table=11 NC_010634.1 RefSeq gene 4691015 4692379 . - . ID=gene4213;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=YPTS_RS21140;old_locus_tag=YPTS_4201 NC_010634.1 Protein Homology CDS 4691015 4692379 . - 0 ID=cds4101;Parent=gene4213;Dbxref=Genbank:WP_011193350.1;Name=WP_011193350.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_011193350.1;transl_table=11 NC_010634.1 RefSeq gene 4692522 4694162 . - . ID=gene4214;Name=YPTS_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21145;old_locus_tag=YPTS_4202 NC_010634.1 Protein Homology CDS 4692522 4694162 . - 0 ID=cds4102;Parent=gene4214;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11 NC_010634.1 RefSeq gene 4694386 4694745 . - . ID=gene4215;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YPTS_RS21150;old_locus_tag=YPTS_4204 NC_010634.1 Protein Homology CDS 4694386 4694745 . - 0 ID=cds4103;Parent=gene4215;Dbxref=Genbank:WP_002228153.1;Name=WP_002228153.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NC_010634.1 RefSeq gene 4694764 4694904 . - . ID=gene4216;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YPTS_RS21155;old_locus_tag=YPTS_4205 NC_010634.1 Protein Homology CDS 4694764 4694904 . - 0 ID=cds4104;Parent=gene4216;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 ##sequence-region NC_010635.1 1 69812 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=502801 NC_010635.1 RefSeq region 1 69812 . + . ID=id324;Dbxref=taxon:502801;Is_circular=true;Name=pYPTS01;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pYPTS01;strain=PB1/+ NC_010635.1 RefSeq gene 69046 69861 . + . ID=gene4217;Name=YPTS_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21165 NC_010635.1 Protein Homology CDS 69046 69861 . + 0 ID=cds4105;Parent=gene4217;Dbxref=Genbank:WP_002212931.1;Name=WP_002212931.1;gbkey=CDS;product=thermoregulatory protein LcrF;protein_id=WP_002212931.1;transl_table=11 NC_010635.1 RefSeq gene 128 226 . + . ID=gene4218;Name=YPTS_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21170 NC_010635.1 Protein Homology CDS 128 226 . + 0 ID=cds4106;Parent=gene4218;Dbxref=Genbank:WP_011191387.1;Name=WP_011191387.1;gbkey=CDS;product=translocation protein YopA;protein_id=WP_011191387.1;transl_table=11 NC_010635.1 RefSeq gene 452 865 . + . ID=gene4219;Name=YPTS_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21175;old_locus_tag=YPTS_4207 NC_010635.1 Protein Homology CDS 452 865 . + 0 ID=cds4107;Parent=gene4219;Dbxref=Genbank:WP_002212925.1;Name=WP_002212925.1;gbkey=CDS;product=chaperone protein YscB;protein_id=WP_002212925.1;transl_table=11 NC_010635.1 RefSeq gene 871 2694 . + . ID=gene4220;Name=YPTS_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21180;old_locus_tag=YPTS_4208 NC_010635.1 Protein Homology CDS 871 2694 . + 0 ID=cds4108;Parent=gene4220;Dbxref=Genbank:WP_012414136.1;Name=WP_012414136.1;gbkey=CDS;product=secretin;protein_id=WP_012414136.1;transl_table=11 NC_010635.1 RefSeq gene 2691 3950 . + . ID=gene4221;Name=YPTS_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21185;old_locus_tag=YPTS_4209 NC_010635.1 Protein Homology CDS 2691 3950 . + 0 ID=cds4109;Parent=gene4221;Dbxref=Genbank:WP_002212919.1;Name=WP_002212919.1;gbkey=CDS;product=preprotein translocase D;protein_id=WP_002212919.1;transl_table=11 NC_010635.1 RefSeq gene 3947 4147 . + . ID=gene4222;Name=YPTS_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21190;old_locus_tag=YPTS_4210 NC_010635.1 Protein Homology CDS 3947 4147 . + 0 ID=cds4110;Parent=gene4222;Dbxref=Genbank:WP_002212917.1;Name=WP_002212917.1;gbkey=CDS;product=preprotein translocase SecE;protein_id=WP_002212917.1;transl_table=11 NC_010635.1 RefSeq gene 4148 4411 . + . ID=gene4223;Name=YPTS_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21195;old_locus_tag=YPTS_4211 NC_010635.1 Protein Homology CDS 4148 4411 . + 0 ID=cds4111;Parent=gene4223;Dbxref=Genbank:WP_002212916.1;Name=WP_002212916.1;gbkey=CDS;product=type III export protein pscF;protein_id=WP_002212916.1;transl_table=11 NC_010635.1 RefSeq gene 4413 4760 . + . ID=gene4224;Name=YPTS_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21200;old_locus_tag=YPTS_4212 NC_010635.1 Protein Homology CDS 4413 4760 . + 0 ID=cds4112;Parent=gene4224;Dbxref=Genbank:WP_011191389.1;Name=WP_011191389.1;gbkey=CDS;product=preprotein translocase G;protein_id=WP_011191389.1;transl_table=11 NC_010635.1 RefSeq gene 4757 5254 . + . ID=gene4225;Name=YPTS_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21205;old_locus_tag=YPTS_4213 NC_010635.1 Protein Homology CDS 4757 5254 . + 0 ID=cds4113;Parent=gene4225;Dbxref=Genbank:WP_011191390.1;Name=WP_011191390.1;gbkey=CDS;product=translocation protein YopH;protein_id=WP_011191390.1;transl_table=11 NC_010635.1 RefSeq gene 5264 5602 . + . ID=gene4226;Name=YPTS_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21210;old_locus_tag=YPTS_4214 NC_010635.1 Protein Homology CDS 5264 5602 . + 0 ID=cds4114;Parent=gene4226;Dbxref=Genbank:WP_032465675.1;Name=WP_032465675.1;gbkey=CDS;product=preprotein translocase I;protein_id=WP_032465675.1;transl_table=11 NC_010635.1 RefSeq gene 5609 6343 . + . ID=gene4227;Name=YPTS_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21215;old_locus_tag=YPTS_4215 NC_010635.1 Protein Homology CDS 5609 6343 . + 0 ID=cds4115;Parent=gene4227;Dbxref=Genbank:WP_002212912.1;Name=WP_002212912.1;gbkey=CDS;product=translocation protein YopJ;protein_id=WP_002212912.1;transl_table=11 NC_010635.1 RefSeq gene 6346 6972 . + . ID=gene4228;Name=YPTS_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21220;old_locus_tag=YPTS_4216 NC_010635.1 Protein Homology CDS 6346 6972 . + 0 ID=cds4116;Parent=gene4228;Dbxref=Genbank:WP_002212911.1;Name=WP_002212911.1;gbkey=CDS;product=preprotein translocase K;protein_id=WP_002212911.1;transl_table=11 NC_010635.1 RefSeq gene 6951 7583 . + . ID=gene4229;Name=YPTS_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21225;old_locus_tag=YPTS_4217 NC_010635.1 Protein Homology CDS 6951 7583 . + 0 ID=cds4117;Parent=gene4229;Dbxref=Genbank:WP_002212909.1;Name=WP_002212909.1;gbkey=CDS;product=type III secretion system protein;protein_id=WP_002212909.1;transl_table=11 NC_010635.1 RefSeq gene 7808 8155 . + . ID=gene4230;Name=YPTS_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21230;old_locus_tag=YPTS_4218 NC_010635.1 Protein Homology CDS 7808 8155 . + 0 ID=cds4118;Parent=gene4230;Dbxref=Genbank:WP_002212907.1;Name=WP_002212907.1;gbkey=CDS;product=translocation protein YopM;protein_id=WP_002212907.1;transl_table=11 NC_010635.1 RefSeq gene 8703 8969 . + . ID=gene4231;Name=YPTS_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21235;old_locus_tag=YPTS_4219 NC_010635.1 Protein Homology CDS 8703 8969 . + 0 ID=cds4119;Parent=gene4231;Dbxref=Genbank:WP_002212900.1;Name=WP_002212900.1;gbkey=CDS;product=low calcium response locus protein S;protein_id=WP_002212900.1;transl_table=11 NC_010635.1 RefSeq gene 9005 9427 . + . ID=gene4232;Name=YPTS_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21240;old_locus_tag=YPTS_4220 NC_010635.1 Protein Homology CDS 9005 9427 . + 0 ID=cds4120;Parent=gene4232;Dbxref=Genbank:WP_011191391.1;Name=WP_011191391.1;gbkey=CDS;product=low calcium response locus protein T;protein_id=WP_011191391.1;transl_table=11 NC_010635.1 RefSeq gene 9424 9719 . + . ID=gene4233;Name=YPTS_RS21245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS21245;pseudo=true NC_010635.1 Protein Homology CDS 9424 9719 . + 0 ID=cds4121;Parent=gene4233;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_table=11 NC_010635.1 RefSeq gene 10231 11637 . - . ID=gene4234;Name=YPTS_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21250;old_locus_tag=YPTS_4221 NC_010635.1 Protein Homology CDS 10231 11637 . - 0 ID=cds4122;Parent=gene4234;Dbxref=Genbank:WP_002213278.1;Name=WP_002213278.1;gbkey=CDS;product=tyrosine-protein phosphatase YopH;protein_id=WP_002213278.1;transl_table=11 NC_010635.1 RefSeq repeat_region 11975 12586 . + . ID=id325;gbkey=repeat_region NC_010635.1 RefSeq gene 12078 12554 . + . ID=gene4235;Name=YPTS_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21255;old_locus_tag=YPTS_4222 NC_010635.1 Protein Homology CDS 12078 12554 . + 0 ID=cds4123;Parent=gene4235;Dbxref=Genbank:WP_012414137.1;Name=WP_012414137.1;gbkey=CDS;product=integrase;protein_id=WP_012414137.1;transl_table=11 NC_010635.1 RefSeq gene 13140 14006 . - . ID=gene4236;Name=YPTS_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21260;old_locus_tag=YPTS_4223 NC_010635.1 Protein Homology CDS 13140 14006 . - 0 ID=cds4124;Parent=gene4236;Dbxref=Genbank:WP_002225474.1;Name=WP_002225474.1;gbkey=CDS;product=effector protein YopJ;protein_id=WP_002225474.1;transl_table=11 NC_010635.1 RefSeq gene 14402 16600 . - . ID=gene4237;Name=YPTS_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21265;old_locus_tag=YPTS_4224 NC_010635.1 Protein Homology CDS 14402 16600 . - 0 ID=cds4125;Parent=gene4237;Dbxref=Genbank:WP_011191359.1;Name=WP_011191359.1;gbkey=CDS;product=protein kinase YpkA;protein_id=WP_011191359.1;transl_table=11 NC_010635.1 RefSeq gene 16608 17057 . - . ID=gene4238;Name=YPTS_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21270;old_locus_tag=YPTS_4225 NC_010635.1 Protein Homology CDS 16608 17057 . - 0 ID=cds4126;Parent=gene4238;Dbxref=Genbank:WP_002229809.1;Name=WP_002229809.1;gbkey=CDS;product=molecular chaperone Tir;protein_id=WP_002229809.1;transl_table=11 NC_010635.1 RefSeq repeat_region 17291 17626 . + . ID=id326;gbkey=repeat_region NC_010635.1 RefSeq gene 17309 17545 . - . ID=gene4239;Name=YPTS_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21275;old_locus_tag=YPTS_4227 NC_010635.1 Protein Homology CDS 17309 17545 . - 0 ID=cds4127;Parent=gene4239;Dbxref=Genbank:WP_012414138.1;Name=WP_012414138.1;gbkey=CDS;product=integrase;protein_id=WP_012414138.1;transl_table=11 NC_010635.1 RefSeq gene 19213 20079 . - . ID=gene4240;Name=YPTS_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21280;old_locus_tag=YPTS_4230 NC_010635.1 Protein Homology CDS 19213 20079 . - 0 ID=cds4128;Parent=gene4240;Dbxref=Genbank:WP_002225475.1;Name=WP_002225475.1;gbkey=CDS;product=replication protein;protein_id=WP_002225475.1;transl_table=11 NC_010635.1 RefSeq gene 20072 20146 . - . ID=gene4241;Name=YPTS_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21285 NC_010635.1 Protein Homology CDS 20072 20146 . - 0 ID=cds4129;Parent=gene4241;Dbxref=Genbank:WP_002233140.1;Name=WP_002233140.1;Note=acts to regulate the expression of the plasmid replication protein RepA in the IncFII plasmid group;gbkey=CDS;product=RepA leader peptide Tap-containing protein;protein_id=WP_002233140.1;transl_table=11 NC_010635.1 RefSeq gene 20388 20642 . - . ID=gene4242;Name=YPTS_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21290;old_locus_tag=YPTS_4231 NC_010635.1 Protein Homology CDS 20388 20642 . - 0 ID=cds4130;Parent=gene4242;Dbxref=Genbank:WP_002229817.1;Name=WP_002229817.1;gbkey=CDS;product=replication protein;protein_id=WP_002229817.1;transl_table=11 NC_010635.1 RefSeq gene 20780 21028 . - . ID=gene4243;Name=YPTS_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21295;old_locus_tag=YPTS_4232 NC_010635.1 Protein Homology CDS 20780 21028 . - 0 ID=cds4131;Parent=gene4243;Dbxref=Genbank:WP_032466929.1;Name=WP_032466929.1;gbkey=CDS;product=phospholipase;protein_id=WP_032466929.1;transl_table=11 NC_010635.1 RefSeq repeat_region 21030 22269 . + . ID=id327;gbkey=repeat_region NC_010635.1 RefSeq gene 21445 21852 . - . ID=gene4244;Name=YPTS_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21300;old_locus_tag=YPTS_4234 NC_010635.1 Protein Homology CDS 21445 21852 . - 0 ID=cds4132;Parent=gene4244;Dbxref=Genbank:WP_012414142.1;Name=WP_012414142.1;gbkey=CDS;product=transposase;protein_id=WP_012414142.1;transl_table=11 NC_010635.1 RefSeq gene 21879 22196 . - . ID=gene4245;Name=YPTS_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21305;old_locus_tag=YPTS_4235 NC_010635.1 Protein Homology CDS 21879 22196 . - 0 ID=cds4133;Parent=gene4245;Dbxref=Genbank:WP_002213244.1;Name=WP_002213244.1;gbkey=CDS;product=transposase;protein_id=WP_002213244.1;transl_table=11 NC_010635.1 RefSeq gene 22368 22826 . - . ID=gene4246;Name=YPTS_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21310;old_locus_tag=YPTS_4236 NC_010635.1 Protein Homology CDS 22368 22826 . - 0 ID=cds4134;Parent=gene4246;Dbxref=Genbank:WP_002213246.1;Name=WP_002213246.1;gbkey=CDS;product=DNA helicase TraI;protein_id=WP_002213246.1;transl_table=11 NC_010635.1 RefSeq repeat_region 22869 23266 . + . ID=id328;gbkey=repeat_region NC_010635.1 RefSeq gene 22895 23164 . + . ID=gene4247;Name=YPTS_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21315;old_locus_tag=YPTS_4237 NC_010635.1 Protein Homology CDS 22895 23164 . + 0 ID=cds4135;Parent=gene4247;Dbxref=Genbank:WP_042469136.1;Name=WP_042469136.1;gbkey=CDS;product=transposase;protein_id=WP_042469136.1;transl_table=11 NC_010635.1 RefSeq gene 23161 23370 . - . ID=gene4248;Name=YPTS_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21320 NC_010635.1 Protein Homology CDS 23161 23370 . - 0 ID=cds4136;Parent=gene4248;Dbxref=Genbank:WP_011191361.1;Name=WP_011191361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191361.1;transl_table=11 NC_010635.1 RefSeq gene 23493 24791 . - . ID=gene4249;Name=YPTS_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21325;old_locus_tag=YPTS_4238 NC_010635.1 Protein Homology CDS 23493 24791 . - 0 ID=cds4137;Parent=gene4249;Dbxref=Genbank:WP_011191362.1;Name=WP_011191362.1;gbkey=CDS;product=adhesin YadA;protein_id=WP_011191362.1;transl_table=11 NC_010635.1 RefSeq gene 25400 25780 . + . ID=gene4250;Name=YPTS_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21330;old_locus_tag=YPTS_4239 NC_010635.1 Protein Homology CDS 25400 25780 . + 0 ID=cds4138;Parent=gene4250;Dbxref=Genbank:WP_002213254.1;Name=WP_002213254.1;gbkey=CDS;product=transposase;protein_id=WP_002213254.1;transl_table=11 NC_010635.1 RefSeq repeat_region 25477 25622 . + . ID=id329;gbkey=repeat_region NC_010635.1 RefSeq gene 25777 28092 . - . ID=gene4251;Name=YPTS_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21335;old_locus_tag=YPTS_4240 NC_010635.1 Protein Homology CDS 25777 28092 . - 0 ID=cds4139;Parent=gene4251;Dbxref=Genbank:WP_002213256.1;Name=WP_002213256.1;gbkey=CDS;product=transposase;protein_id=WP_002213256.1;transl_table=11 NC_010635.1 RefSeq gene 28256 28807 . + . ID=gene4252;Name=YPTS_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21340;old_locus_tag=YPTS_4241 NC_010635.1 Protein Homology CDS 28256 28807 . + 0 ID=cds4140;Parent=gene4252;Dbxref=Genbank:WP_002213258.1;Name=WP_002213258.1;gbkey=CDS;product=recombinase;protein_id=WP_002213258.1;transl_table=11 NC_010635.1 RefSeq gene 28826 29290 . + . ID=gene4253;Name=YPTS_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21345;old_locus_tag=YPTS_4242 NC_010635.1 Protein Homology CDS 28826 29290 . + 0 ID=cds4141;Parent=gene4253;Dbxref=Genbank:WP_012414143.1;Name=WP_012414143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414143.1;transl_table=11 NC_010635.1 RefSeq gene 29429 29758 . + . ID=gene4254;Name=YPTS_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21350;old_locus_tag=YPTS_4243 NC_010635.1 Protein Homology CDS 29429 29758 . + 0 ID=cds4142;Parent=gene4254;Dbxref=Genbank:WP_002229829.1;Name=WP_002229829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229829.1;transl_table=11 NC_010635.1 RefSeq gene 29858 30124 . + . ID=gene4255;Name=YPTS_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21355;old_locus_tag=YPTS_4244 NC_010635.1 Protein Homology CDS 29858 30124 . + 0 ID=cds4143;Parent=gene4255;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_010635.1 RefSeq repeat_region 30378 30989 . + . ID=id330;gbkey=repeat_region NC_010635.1 RefSeq gene 30481 30957 . + . ID=gene4256;Name=YPTS_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21360 NC_010635.1 Protein Homology CDS 30481 30957 . + 0 ID=cds4144;Parent=gene4256;Dbxref=Genbank:WP_041175525.1;Name=WP_041175525.1;gbkey=CDS;product=integrase;protein_id=WP_041175525.1;transl_table=11 NC_010635.1 RefSeq gene 31105 31530 . - . ID=gene4257;Name=YPTS_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21365;old_locus_tag=YPTS_4246 NC_010635.1 Protein Homology CDS 31105 31530 . - 0 ID=cds4145;Parent=gene4257;Dbxref=Genbank:WP_002213267.1;Name=WP_002213267.1;gbkey=CDS;product=yopH targeting protein;protein_id=WP_002213267.1;transl_table=11 NC_010635.1 RefSeq gene 31905 32303 . - . ID=gene4258;Name=YPTS_RS21370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPTS_RS21370;old_locus_tag=YPTS_4247;partial=true;pseudo=true;start_range=.,31905 NC_010635.1 Protein Homology CDS 31905 32303 . - 0 ID=cds4146;Parent=gene4258;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,31905;transl_table=11 NC_010635.1 RefSeq gene 32303 33475 . - . ID=gene4259;Name=YPTS_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21375;old_locus_tag=YPTS_4248 NC_010635.1 Protein Homology CDS 32303 33475 . - 0 ID=cds4147;Parent=gene4259;Dbxref=Genbank:WP_011191364.1;Name=WP_011191364.1;gbkey=CDS;product=integrase;protein_id=WP_011191364.1;transl_table=11 NC_010635.1 RefSeq gene 33725 34027 . + . ID=gene4260;Name=YPTS_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21385;old_locus_tag=YPTS_4250 NC_010635.1 Protein Homology CDS 33725 34027 . + 0 ID=cds4148;Parent=gene4260;Dbxref=Genbank:WP_041175613.1;Name=WP_041175613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175613.1;transl_table=11 NC_010635.1 RefSeq gene 34090 34482 . - . ID=gene4261;Name=YPTS_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21390;old_locus_tag=YPTS_4251 NC_010635.1 Protein Homology CDS 34090 34482 . - 0 ID=cds4149;Parent=gene4261;Dbxref=Genbank:WP_002213403.1;Name=WP_002213403.1;gbkey=CDS;product=YopE regulator;protein_id=WP_002213403.1;transl_table=11 NC_010635.1 RefSeq gene 34751 35335 . + . ID=gene4262;Name=YPTS_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21395;old_locus_tag=YPTS_4252 NC_010635.1 Protein Homology CDS 34751 35335 . + 0 ID=cds4150;Parent=gene4262;Dbxref=Genbank:WP_002353311.1;Name=WP_002353311.1;gbkey=CDS;product=virulence protein YopE;protein_id=WP_002353311.1;transl_table=11 NC_010635.1 RefSeq gene 35475 35774 . - . ID=gene4263;Name=YPTS_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21400;old_locus_tag=YPTS_4253 NC_010635.1 Protein Homology CDS 35475 35774 . - 0 ID=cds4151;Parent=gene4263;Dbxref=Genbank:WP_002213360.1;Name=WP_002213360.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002213360.1;transl_table=11 NC_010635.1 RefSeq gene 35767 36009 . - . ID=gene4264;Name=YPTS_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21405;old_locus_tag=YPTS_4254 NC_010635.1 Protein Homology CDS 35767 36009 . - 0 ID=cds4152;Parent=gene4264;Dbxref=Genbank:WP_012414146.1;Name=WP_012414146.1;gbkey=CDS;product=antitoxin;protein_id=WP_012414146.1;transl_table=11 NC_010635.1 RefSeq gene 36854 37282 . - . ID=gene4265;Name=YPTS_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21410 NC_010635.1 Protein Homology CDS 36854 37282 . - 0 ID=cds4153;Parent=gene4265;Dbxref=Genbank:WP_041175614.1;Name=WP_041175614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175614.1;transl_table=11 NC_010635.1 RefSeq repeat_region 36905 37322 . + . ID=id331;gbkey=repeat_region NC_010635.1 RefSeq gene 37450 38415 . - . ID=gene4266;Name=YPTS_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21415;old_locus_tag=YPTS_4257 NC_010635.1 Protein Homology CDS 37450 38415 . - 0 ID=cds4154;Parent=gene4266;Dbxref=Genbank:WP_002213354.1;Name=WP_002213354.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002213354.1;transl_table=11 NC_010635.1 RefSeq gene 38412 39578 . - . ID=gene4267;Name=YPTS_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21420;old_locus_tag=YPTS_4258 NC_010635.1 Protein Homology CDS 38412 39578 . - 0 ID=cds4155;Parent=gene4267;Dbxref=Genbank:WP_002220902.1;Name=WP_002220902.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002220902.1;transl_table=11 NC_010635.1 RefSeq repeat_region 40320 41557 . + . ID=id332;gbkey=repeat_region NC_010635.1 RefSeq gene 40377 40571 . - . ID=gene4268;Name=YPTS_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21425;old_locus_tag=YPTS_4260 NC_010635.1 Protein Homology CDS 40377 40571 . - 0 ID=cds4156;Parent=gene4268;Dbxref=Genbank:WP_011191370.1;Name=WP_011191370.1;gbkey=CDS;product=transposase;protein_id=WP_011191370.1;transl_table=11 NC_010635.1 RefSeq gene 40683 41141 . - . ID=gene4269;Name=YPTS_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21430;old_locus_tag=YPTS_4261 NC_010635.1 Protein Homology CDS 40683 41141 . - 0 ID=cds4157;Parent=gene4269;Dbxref=Genbank:WP_002229768.1;Name=WP_002229768.1;gbkey=CDS;product=transposase;protein_id=WP_002229768.1;transl_table=11 NC_010635.1 RefSeq gene 41168 41485 . - . ID=gene4270;Name=YPTS_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21435;old_locus_tag=YPTS_4262 NC_010635.1 Protein Homology CDS 41168 41485 . - 0 ID=cds4158;Parent=gene4270;Dbxref=Genbank:WP_002213244.1;Name=WP_002213244.1;gbkey=CDS;product=transposase;protein_id=WP_002213244.1;transl_table=11 NC_010635.1 RefSeq gene 41592 42209 . - . ID=gene4271;Name=YPTS_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21440;old_locus_tag=YPTS_4263 NC_010635.1 Protein Homology CDS 41592 42209 . - 0 ID=cds4159;Parent=gene4271;Dbxref=Genbank:WP_012414150.1;Name=WP_012414150.1;gbkey=CDS;product=conjugal transfer protein TraT;protein_id=WP_012414150.1;transl_table=11 NC_010635.1 RefSeq repeat_region 42516 42661 . + . ID=id333;gbkey=repeat_region NC_010635.1 RefSeq gene 42819 43367 . - . ID=gene4272;Name=YPTS_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21445;old_locus_tag=YPTS_4264 NC_010635.1 Protein Homology CDS 42819 43367 . - 0 ID=cds4160;Parent=gene4272;Dbxref=Genbank:WP_011191373.1;Name=WP_011191373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191373.1;transl_table=11 NC_010635.1 RefSeq gene 43867 44835 . + . ID=gene4273;Name=YPTS_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21450;old_locus_tag=YPTS_4265 NC_010635.1 Protein Homology CDS 43867 44835 . + 0 ID=cds4161;Parent=gene4273;Dbxref=Genbank:WP_011191374.1;Name=WP_011191374.1;gbkey=CDS;product=cysteine protease;protein_id=WP_011191374.1;transl_table=11 NC_010635.1 RefSeq gene 44835 45227 . + . ID=gene4274;Name=YPTS_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21455;old_locus_tag=YPTS_4266 NC_010635.1 Protein Homology CDS 44835 45227 . + 0 ID=cds4162;Parent=gene4274;Dbxref=Genbank:WP_011191375.1;Name=WP_011191375.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_011191375.1;transl_table=11 NC_010635.1 RefSeq gene 45271 45582 . - . ID=gene4275;Name=YPTS_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21460;old_locus_tag=YPTS_4267 NC_010635.1 Protein Homology CDS 45271 45582 . - 0 ID=cds4163;Parent=gene4275;Dbxref=Genbank:WP_012414151.1;Name=WP_012414151.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414151.1;transl_table=11 NC_010635.1 RefSeq repeat_region 45630 45968 . + . ID=id334;gbkey=repeat_region NC_010635.1 RefSeq gene 45931 46350 . + . ID=gene4276;Name=YPTS_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21465;old_locus_tag=YPTS_4268 NC_010635.1 Protein Homology CDS 45931 46350 . + 0 ID=cds4164;Parent=gene4276;Dbxref=Genbank:WP_011191376.1;Name=WP_011191376.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191376.1;transl_table=11 NC_010635.1 RefSeq repeat_region 46824 47097 . + . ID=id335;gbkey=repeat_region NC_010635.1 RefSeq gene 47328 47543 . + . ID=gene4277;Name=YPTS_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21470;old_locus_tag=YPTS_4269 NC_010635.1 Protein Homology CDS 47328 47543 . + 0 ID=cds4165;Parent=gene4277;Dbxref=Genbank:WP_012414152.1;Name=WP_012414152.1;gbkey=CDS;product=transposase;protein_id=WP_012414152.1;transl_table=11 NC_010635.1 RefSeq gene 47586 49175 . - . ID=gene4278;Name=YPTS_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21475;old_locus_tag=YPTS_4270 NC_010635.1 Protein Homology CDS 47586 49175 . - 0 ID=cds4166;Parent=gene4278;Dbxref=Genbank:WP_012414153.1;Name=WP_012414153.1;gbkey=CDS;product=YopM%3B targeted effector protein;protein_id=WP_012414153.1;transl_table=11 NC_010635.1 RefSeq repeat_region 47983 48236 . + . ID=id336;gbkey=repeat_region NC_010635.1 RefSeq repeat_region 48292 48802 . + . ID=id337;gbkey=repeat_region NC_010635.1 RefSeq gene 49563 49778 . - . ID=gene4279;Name=YPTS_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21480;old_locus_tag=YPTS_4271 NC_010635.1 Protein Homology CDS 49563 49778 . - 0 ID=cds4167;Parent=gene4279;Dbxref=Genbank:WP_011191379.1;Name=WP_011191379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191379.1;transl_table=11 NC_010635.1 RefSeq repeat_region 50212 50417 . + . ID=id338;gbkey=repeat_region NC_010635.1 RefSeq gene 50528 51736 . + . ID=gene4280;Name=YPTS_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21485;old_locus_tag=YPTS_4272 NC_010635.1 Protein Homology CDS 50528 51736 . + 0 ID=cds4168;Parent=gene4280;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_010635.1 RefSeq gene 52228 53148 . - . ID=gene4281;Name=YPTS_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21490;old_locus_tag=YPTS_4273 NC_010635.1 Protein Homology CDS 52228 53148 . - 0 ID=cds4169;Parent=gene4281;Dbxref=Genbank:WP_002212987.1;Name=WP_002212987.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212987.1;transl_table=11 NC_010635.1 RefSeq gene 53167 54372 . - . ID=gene4282;Name=YPTS_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21495;old_locus_tag=YPTS_4274 NC_010635.1 Protein Homology CDS 53167 54372 . - 0 ID=cds4170;Parent=gene4282;Dbxref=Genbank:WP_011191382.1;Name=WP_011191382.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191382.1;transl_table=11 NC_010635.1 RefSeq gene 54350 54856 . - . ID=gene4283;Name=YPTS_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21500;old_locus_tag=YPTS_4275 NC_010635.1 Protein Homology CDS 54350 54856 . - 0 ID=cds4171;Parent=gene4283;Dbxref=Genbank:WP_011117633.1;Name=WP_011117633.1;gbkey=CDS;product=low calcium response locus protein H;protein_id=WP_011117633.1;transl_table=11 NC_010635.1 RefSeq gene 54869 55849 . - . ID=gene4284;Name=YPTS_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21505;old_locus_tag=YPTS_4276 NC_010635.1 Protein Homology CDS 54869 55849 . - 0 ID=cds4172;Parent=gene4284;Dbxref=Genbank:WP_011191383.1;Name=WP_011191383.1;gbkey=CDS;product=Virulence-associated V antigen;protein_id=WP_011191383.1;transl_table=11 NC_010635.1 RefSeq gene 55851 56138 . - . ID=gene4285;Name=YPTS_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21510;old_locus_tag=YPTS_4277 NC_010635.1 Protein Homology CDS 55851 56138 . - 0 ID=cds4173;Parent=gene4285;Dbxref=Genbank:WP_002212973.1;Name=WP_002212973.1;gbkey=CDS;product=low calcium response locus protein G;protein_id=WP_002212973.1;transl_table=11 NC_010635.1 RefSeq gene 56180 56620 . - . ID=gene4286;Name=YPTS_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21515;old_locus_tag=YPTS_4278 NC_010635.1 Protein Homology CDS 56180 56620 . - 0 ID=cds4174;Parent=gene4286;Dbxref=Genbank:WP_002220918.1;Name=WP_002220918.1;gbkey=CDS;product=low calcium response locus protein R;protein_id=WP_002220918.1;transl_table=11 NC_010635.1 RefSeq gene 56617 58731 . - . ID=gene4287;Name=YPTS_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21520;old_locus_tag=YPTS_4279 NC_010635.1 Protein Homology CDS 56617 58731 . - 0 ID=cds4175;Parent=gene4287;Dbxref=Genbank:WP_002212971.1;Name=WP_002212971.1;gbkey=CDS;product=low calcium response locus protein D;protein_id=WP_002212971.1;transl_table=11 NC_010635.1 RefSeq gene 58718 59056 . - . ID=gene4288;Name=YPTS_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21525;old_locus_tag=YPTS_4280 NC_010635.1 Protein Homology CDS 58718 59056 . - 0 ID=cds4176;Parent=gene4288;Dbxref=Genbank:WP_032465674.1;Name=WP_032465674.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_032465674.1;transl_table=11 NC_010635.1 RefSeq gene 59059 59427 . - . ID=gene4289;Name=YPTS_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21530;old_locus_tag=YPTS_4281 NC_010635.1 Protein Homology CDS 59059 59427 . - 0 ID=cds4177;Parent=gene4289;Dbxref=Genbank:WP_002212969.1;Name=WP_002212969.1;gbkey=CDS;product=translocation protein YopX;protein_id=WP_002212969.1;transl_table=11 NC_010635.1 RefSeq gene 59424 59795 . - . ID=gene4290;Name=YPTS_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21535;old_locus_tag=YPTS_4282 NC_010635.1 Protein Homology CDS 59424 59795 . - 0 ID=cds4178;Parent=gene4290;Dbxref=Genbank:WP_002229794.1;Name=WP_002229794.1;gbkey=CDS;product=chaperone protein SycN;protein_id=WP_002229794.1;transl_table=11 NC_010635.1 RefSeq gene 59782 60060 . - . ID=gene4291;Name=YPTS_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21540;old_locus_tag=YPTS_4283 NC_010635.1 Protein Homology CDS 59782 60060 . - 0 ID=cds4179;Parent=gene4291;Dbxref=Genbank:WP_002212965.1;Name=WP_002212965.1;gbkey=CDS;product=protein TyeA;protein_id=WP_002212965.1;transl_table=11 NC_010635.1 RefSeq gene 60041 60922 . - . ID=gene4292;Name=YPTS_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21545;old_locus_tag=YPTS_4284 NC_010635.1 Protein Homology CDS 60041 60922 . - 0 ID=cds4180;Parent=gene4292;Dbxref=Genbank:WP_011191384.1;Name=WP_011191384.1;gbkey=CDS;product=outer membrane protein YopN;protein_id=WP_011191384.1;transl_table=11 NC_010635.1 RefSeq gene 61120 62439 . + . ID=gene4293;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPTS_RS21550;old_locus_tag=YPTS_4285 NC_010635.1 Protein Homology CDS 61120 62439 . + 0 ID=cds4181;Parent=gene4293;Dbxref=Genbank:WP_002212955.1;Name=WP_002212955.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_002212955.1;transl_table=11 NC_010635.1 RefSeq gene 62436 62900 . + . ID=gene4294;Name=YPTS_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21555;old_locus_tag=YPTS_4286 NC_010635.1 Protein Homology CDS 62436 62900 . + 0 ID=cds4182;Parent=gene4294;Dbxref=Genbank:WP_012414154.1;Name=WP_012414154.1;gbkey=CDS;product=translocation protein YopO;protein_id=WP_012414154.1;transl_table=11 NC_010635.1 RefSeq gene 62900 64267 . + . ID=gene4295;Name=YPTS_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21560;old_locus_tag=YPTS_4287 NC_010635.1 Protein Homology CDS 62900 64267 . + 0 ID=cds4183;Parent=gene4295;Dbxref=Genbank:WP_011191386.1;Name=WP_011191386.1;gbkey=CDS;product=translocation protein YopP;protein_id=WP_011191386.1;transl_table=11 NC_010635.1 RefSeq gene 64264 65187 . + . ID=gene4296;Name=YPTS_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21565;old_locus_tag=YPTS_4288 NC_010635.1 Protein Homology CDS 64264 65187 . + 0 ID=cds4184;Parent=gene4296;Dbxref=Genbank:WP_002212948.1;Name=WP_002212948.1;gbkey=CDS;product=translocation protein YopQ;protein_id=WP_002212948.1;transl_table=11 NC_010635.1 RefSeq gene 65184 65837 . + . ID=gene4297;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPTS_RS21570;old_locus_tag=YPTS_4289 NC_010635.1 Protein Homology CDS 65184 65837 . + 0 ID=cds4185;Parent=gene4297;Dbxref=Genbank:WP_002212947.1;Name=WP_002212947.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=translocation protein YopR;protein_id=WP_002212947.1;transl_table=11 NC_010635.1 RefSeq gene 65839 66105 . + . ID=gene4298;Name=YPTS_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21575;old_locus_tag=YPTS_4290 NC_010635.1 Protein Homology CDS 65839 66105 . + 0 ID=cds4186;Parent=gene4298;Dbxref=Genbank:WP_002212945.1;Name=WP_002212945.1;gbkey=CDS;product=translocation protein YopS;protein_id=WP_002212945.1;transl_table=11 NC_010635.1 RefSeq gene 66102 66887 . + . ID=gene4299;Name=YPTS_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21580;old_locus_tag=YPTS_4291 NC_010635.1 Protein Homology CDS 66102 66887 . + 0 ID=cds4187;Parent=gene4299;Dbxref=Genbank:WP_002212938.1;Name=WP_002212938.1;gbkey=CDS;product=translocation protein YopT;protein_id=WP_002212938.1;transl_table=11 NC_010635.1 RefSeq gene 66887 67951 . + . ID=gene4300;Name=YPTS_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21585;old_locus_tag=YPTS_4292 NC_010635.1 Protein Homology CDS 66887 67951 . + 0 ID=cds4188;Parent=gene4300;Dbxref=Genbank:WP_002212936.1;Name=WP_002212936.1;gbkey=CDS;product=translocation protein YopU;protein_id=WP_002212936.1;transl_table=11 NC_010635.1 RefSeq gene 68527 68922 . + . ID=gene4301;Name=YPTS_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPTS_RS21590;old_locus_tag=YPTS_4293 NC_010635.1 Protein Homology CDS 68527 68922 . + 0 ID=cds4189;Parent=gene4301;Dbxref=Genbank:WP_002222527.1;Name=WP_002222527.1;gbkey=CDS;product=type III secretion system chaperone VirG;protein_id=WP_002222527.1;transl_table=11 ###