locus-tag class description UGYR_RS00010 PF01433 Peptidase family M1 domain UGYR_RS00010 PF17432 Domain of unknown function (DUF3458_C) ARM repeats UGYR_RS00010 PF11940 Domain of unknown function (DUF3458) Ig-like fold UGYR_RS00015 PF01180 Dihydroorotate dehydrogenase UGYR_RS00020 PF07126 Cell-division protein ZapC UGYR_RS00025 PF00111 2Fe-2S iron-sulfur cluster binding domain UGYR_RS00025 PF03476 MOSC N-terminal beta barrel domain UGYR_RS00025 PF03473 MOSC domain UGYR_RS00030 PF01170 Putative RNA methylase family UPF0020 UGYR_RS00030 PF02926 THUMP domain UGYR_RS00030 PF10672 S-adenosylmethionine-dependent methyltransferase UGYR_RS00035 PF00005 ABC transporter UGYR_RS00035 PF12848 ABC transporter UGYR_RS00035 PF16326 ABC transporter C-terminal domain UGYR_RS00040 PF04403 Paraquat-inducible protein A UGYR_RS00045 PF02470 MlaD protein UGYR_RS00050 PF03886 ABC-type transport auxiliary lipoprotein component UGYR_RS00055 PF07977 FabA-like domain UGYR_RS00060 PF13654 AAA domain UGYR_RS00060 PF05362 Lon protease (S16) C-terminal proteolytic domain UGYR_RS00065 PF06303 MatP N-terminal domain UGYR_RS00065 PF17414 MatP C-terminal ribbon-helix-helix domain UGYR_RS00070 PF01389 OmpA-like transmembrane domain UGYR_RS00070 PF00691 OmpA family UGYR_RS00075 PF03846 Cell division inhibitor SulA UGYR_RS00080 PF04993 TfoX N-terminal domain UGYR_RS00080 PF04994 TfoX C-terminal domain UGYR_RS00085 PF12805 FUSC-like inner membrane protein yccS UGYR_RS00090 PF03733 Inner membrane component domain UGYR_RS00095 PF13361 UvrD-like helicase C-terminal domain UGYR_RS00095 PF12462 DNA helicase IV / RNA helicase N terminal UGYR_RS00095 PF00580 UvrD/REP helicase N-terminal domain UGYR_RS00100 PF02142 MGS-like domain UGYR_RS00105 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) UGYR_RS00110 PF13380 CoA binding domain UGYR_RS00115 PF08755 Hemimethylated DNA-binding protein YccV like UGYR_RS00120 PF17785 PUA-like domain UGYR_RS00120 PF10672 S-adenosylmethionine-dependent methyltransferase UGYR_RS00125 PF00708 Acylphosphatase UGYR_RS00130 PF04358 DsrC like protein UGYR_RS00140 PF00484 Carbonic anhydrase UGYR_RS00145 PF00999 Sodium/hydrogen exchanger family UGYR_RS00145 PF03471 Transporter associated domain UGYR_RS00145 PF02080 TrkA-C domain UGYR_RS00155 PF01757 Acyltransferase family UGYR_RS00160 PF04349 Periplasmic glucan biosynthesis protein, MdoG UGYR_RS00165 PF00535 Glycosyl transferase family 2 UGYR_RS00175 PF00854 POT family UGYR_RS00185 PF03279 Bacterial lipid A biosynthesis acyltransferase UGYR_RS00190 PF00581 Rhodanese-like domain UGYR_RS00190 PF12368 Rhodanase C-terminal UGYR_RS00190 PF17773 UPF0176 acylphosphatase like domain UGYR_RS00195 PF01594 AI-2E family transporter UGYR_RS00200 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS00205 PF01266 FAD dependent oxidoreductase UGYR_RS00210 PF13991 BssS protein family UGYR_RS00215 PF06183 DinI-like family UGYR_RS00220 PF01979 Amidohydrolase family UGYR_RS00225 PF03992 Antibiotic biosynthesis monooxygenase UGYR_RS00235 PF10150 Ribonuclease E/G family UGYR_RS00235 PF00575 S1 RNA binding domain UGYR_RS00235 PF12111 Polyribonucleotide phosphorylase C terminal UGYR_RS00240 PF01479 S4 domain UGYR_RS00240 PF00849 RNA pseudouridylate synthase UGYR_RS00245 PF02545 Maf-like protein UGYR_RS00250 PF02620 Large ribosomal RNA subunit accumulation protein YceD UGYR_RS00255 PF01783 Ribosomal L32p protein family UGYR_RS00260 PF02504 Fatty acid synthesis protein UGYR_RS00265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UGYR_RS00265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UGYR_RS00270 PF00698 Acyl transferase domain UGYR_RS00280 PF00550 Phosphopantetheine attachment site UGYR_RS00285 PF00109 Beta-ketoacyl synthase, N-terminal domain UGYR_RS00285 PF02801 Beta-ketoacyl synthase, C-terminal domain UGYR_RS00290 PF01063 Amino-transferase class IV UGYR_RS00295 PF02618 YceG-like family UGYR_RS00300 PF02223 Thymidylate kinase UGYR_RS00305 PF09115 DNA polymerase III, delta subunit, C terminal UGYR_RS00310 PF01026 TatD related DNase UGYR_RS00315 PF00367 phosphotransferase system, EIIB UGYR_RS00315 PF02378 Phosphotransferase system, EIIC UGYR_RS00320 PF01230 HIT domain UGYR_RS00325 PF07233 Protein of unknown function (DUF1425) UGYR_RS00330 PF08139 Prokaryotic membrane lipoprotein lipid attachment site UGYR_RS00330 PF13036 Peptidoglycan-synthase activator LpoB UGYR_RS00335 PF01636 Phosphotransferase enzyme family UGYR_RS00340 PF00933 Glycosyl hydrolase family 3 N terminal domain UGYR_RS00345 PF05728 Uncharacterised protein family (UPF0227) UGYR_RS00350 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS00355 PF05433 Glycine zipper 2TM domain UGYR_RS00360 PF03461 TRCF domain UGYR_RS00360 PF02559 CarD-like/TRCF domain UGYR_RS00360 PF00270 DEAD/DEAH box helicase UGYR_RS00360 PF00271 Helicase conserved C-terminal domain UGYR_RS00360 PF17757 UvrB interaction domain UGYR_RS00365 PF02687 FtsX-like permease family UGYR_RS00365 PF12704 MacB-like periplasmic core domain UGYR_RS00370 PF00005 ABC transporter UGYR_RS00375 PF02687 FtsX-like permease family UGYR_RS00375 PF12704 MacB-like periplasmic core domain UGYR_RS00380 PF00480 ROK family UGYR_RS00385 PF02146 Sir2 family UGYR_RS00390 PF07687 Peptidase dimerisation domain UGYR_RS00390 PF01546 Peptidase family M20/M25/M40 UGYR_RS00395 PF08007 Cupin superfamily protein UGYR_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS00400 PF08918 PhoQ Sensor UGYR_RS00405 PF00072 Response regulator receiver domain UGYR_RS00405 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS00415 PF08328 Adenylosuccinate lyase C-terminal UGYR_RS00415 PF00206 Lyase UGYR_RS00420 PF04356 Protein of unknown function (DUF489) UGYR_RS00430 PF00293 NUDIX domain UGYR_RS00435 PF00849 RNA pseudouridylate synthase UGYR_RS00440 PF00180 Isocitrate/isopropylmalate dehydrogenase UGYR_RS00445 PF03472 Autoinducer binding domain UGYR_RS00445 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS00450 PF00765 Autoinducer synthase UGYR_RS00455 PF00232 Glycosyl hydrolase family 1 UGYR_RS00460 PF01432 Peptidase family M3 UGYR_RS00465 PF00672 HAMP domain UGYR_RS00465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS00465 PF02203 Tar ligand binding domain homologue UGYR_RS00470 PF03390 2-hydroxycarboxylate transporter family UGYR_RS00475 PF00072 Response regulator receiver domain UGYR_RS00480 PF00989 PAS fold UGYR_RS00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS00480 PF17203 Single cache domain 3 UGYR_RS00480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UGYR_RS00485 PF00939 Sodium:sulfate symporter transmembrane region UGYR_RS00490 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) UGYR_RS00490 PF00413 Matrixin UGYR_RS00490 PF08548 Peptidase M10 serralysin C terminal UGYR_RS00495 PF02974 Protease inhibitor Inh UGYR_RS00500 PF00005 ABC transporter UGYR_RS00500 PF00664 ABC transporter transmembrane region UGYR_RS00505 PF00529 HlyD membrane-fusion protein of T1SS UGYR_RS00510 PF02321 Outer membrane efflux protein UGYR_RS00525 PF02311 AraC-like ligand binding domain UGYR_RS00525 PF12833 Helix-turn-helix domain UGYR_RS00530 PF02562 PhoH-like protein UGYR_RS00535 PF01699 Sodium/calcium exchanger protein UGYR_RS00540 PF08021 Siderophore-interacting FAD-binding domain UGYR_RS00540 PF04954 Siderophore-interacting protein UGYR_RS00545 PF00672 HAMP domain UGYR_RS00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS00545 PF07730 Histidine kinase UGYR_RS00545 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term UGYR_RS00550 PF02322 Cytochrome bd terminal oxidase subunit II UGYR_RS00555 PF01654 Cytochrome bd terminal oxidase subunit I UGYR_RS00560 PF00392 Bacterial regulatory proteins, gntR family UGYR_RS00560 PF00155 Aminotransferase class I and II UGYR_RS00565 PF00202 Aminotransferase class-III UGYR_RS00570 PF04958 Arginine N-succinyltransferase beta subunit UGYR_RS00575 PF00171 Aldehyde dehydrogenase family UGYR_RS00580 PF04996 Succinylarginine dihydrolase UGYR_RS00585 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family UGYR_RS00590 PF00267 Gram-negative porin UGYR_RS00600 PF01979 Amidohydrolase family UGYR_RS00605 PF07702 UTRA domain UGYR_RS00605 PF00392 Bacterial regulatory proteins, gntR family UGYR_RS00610 PF01979 Amidohydrolase family UGYR_RS00615 PF05962 HutD UGYR_RS00620 PF03466 LysR substrate binding domain UGYR_RS00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS00630 PF03824 High-affinity nickel-transport protein UGYR_RS00635 PF01300 Telomere recombination UGYR_RS00635 PF17788 HypF Kae1-like domain UGYR_RS00635 PF00708 Acylphosphatase UGYR_RS00635 PF07503 HypF finger UGYR_RS00640 PF00384 Molybdopterin oxidoreductase UGYR_RS00640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UGYR_RS00640 PF01568 Molydopterin dinucleotide binding domain UGYR_RS00645 PF12800 4Fe-4S binding domain UGYR_RS00645 PF13247 4Fe-4S dicluster domain UGYR_RS00650 PF01750 Hydrogenase maturation protease UGYR_RS00655 PF07450 Formate hydrogenlyase maturation protein HycH UGYR_RS00660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UGYR_RS00665 PF12838 4Fe-4S dicluster domain UGYR_RS00670 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UGYR_RS00670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UGYR_RS00670 PF00374 Nickel-dependent hydrogenase UGYR_RS00675 PF00146 NADH dehydrogenase UGYR_RS00680 PF00361 Proton-conducting membrane transporter UGYR_RS00685 PF13247 4Fe-4S dicluster domain UGYR_RS00690 PF11046 Transcriptional repressor of hyc and hyp operons UGYR_RS00695 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA UGYR_RS00700 PF02492 CobW/HypB/UreG, nucleotide-binding domain UGYR_RS00705 PF01455 HupF/HypC family UGYR_RS00710 PF01924 Hydrogenase formation hypA family UGYR_RS00715 PF02769 AIR synthase related protein, C-terminal domain UGYR_RS00715 PF00586 AIR synthase related protein, N-terminal domain UGYR_RS00720 PF01590 GAF domain UGYR_RS00720 PF02954 Bacterial regulatory protein, Fis family UGYR_RS00720 PF00158 Sigma-54 interaction domain UGYR_RS00735 PF00577 Outer membrane usher protein UGYR_RS00735 PF13954 PapC N-terminal domain UGYR_RS00740 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS00740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS00755 PF12833 Helix-turn-helix domain UGYR_RS00760 PF01926 50S ribosome-binding GTPase UGYR_RS00760 PF06071 Protein of unknown function (DUF933) UGYR_RS00770 PF01195 Peptidyl-tRNA hydrolase UGYR_RS00775 PF10762 Protein of unknown function (DUF2583) UGYR_RS00780 PF14572 Phosphoribosyl synthetase-associated domain UGYR_RS00780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UGYR_RS00785 PF00288 GHMP kinases N terminal domain UGYR_RS00785 PF08544 GHMP kinases C terminal UGYR_RS00790 PF03550 Outer membrane lipoprotein LolB UGYR_RS00795 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UGYR_RS00795 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UGYR_RS00795 PF01488 Shikimate / quinate 5-dehydrogenase UGYR_RS00800 PF00472 RF-1 domain UGYR_RS00800 PF03462 PCRF domain UGYR_RS00805 PF13847 Methyltransferase domain UGYR_RS00805 PF17827 PrmC N-terminal domain UGYR_RS00810 PF04247 Invasion gene expression up-regulator, SirB UGYR_RS00815 PF13369 Transglutaminase-like superfamily UGYR_RS00820 PF00793 DAHP synthetase I family UGYR_RS00825 PF00916 Sulfate permease family UGYR_RS00825 PF01740 STAS domain UGYR_RS00830 PF01527 Transposase UGYR_RS00840 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS00850 PF03009 Glycerophosphoryl diester phosphodiesterase family UGYR_RS00860 PF00854 POT family UGYR_RS00865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UGYR_RS00870 PF02811 PHP domain UGYR_RS00875 PF02613 Nitrate reductase delta subunit UGYR_RS00880 PF07273 Protein of unknown function (DUF1439) UGYR_RS00890 PF07690 Major Facilitator Superfamily UGYR_RS00895 PF13302 Acetyltransferase (GNAT) domain UGYR_RS00900 PF04337 Protein of unknown function, DUF480 UGYR_RS00905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UGYR_RS00910 PF03023 Lipid II flippase MurJ UGYR_RS00915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB UGYR_RS00915 PF17287 POTRA domain UGYR_RS00915 PF08479 POTRA domain, ShlB-type UGYR_RS00920 PF05860 haemagglutination activity domain UGYR_RS00920 PF13332 Hemagglutinin repeat UGYR_RS00930 PF03485 Arginyl tRNA synthetase N terminal domain UGYR_RS00930 PF00750 tRNA synthetases class I (R) UGYR_RS00930 PF05746 DALR anticodon binding domain UGYR_RS00935 PF06185 YecM protein UGYR_RS00940 PF03932 CutC family UGYR_RS00945 PF08003 Protein of unknown function (DUF1698) UGYR_RS00950 PF13649 Methyltransferase domain UGYR_RS00955 PF01124 MAPEG family UGYR_RS00960 PF01904 Protein of unknown function DUF72 UGYR_RS00970 PF02938 GAD domain UGYR_RS00970 PF00152 tRNA synthetases class II (D, K and N) UGYR_RS00970 PF01336 OB-fold nucleic acid binding domain UGYR_RS00975 PF00293 NUDIX domain UGYR_RS00980 PF01709 Transcriptional regulator UGYR_RS00985 PF02075 Crossover junction endodeoxyribonuclease RuvC UGYR_RS00990 PF07499 RuvA, C-terminal domain UGYR_RS00990 PF01330 RuvA N terminal domain UGYR_RS00995 PF17864 RuvB AAA lid domain UGYR_RS00995 PF05491 RuvB C-terminal winged helix domain UGYR_RS00995 PF05496 Holliday junction DNA helicase RuvB P-loop domain UGYR_RS01000 PF00854 POT family UGYR_RS01005 PF00950 ABC 3 transport family UGYR_RS01010 PF00005 ABC transporter UGYR_RS01015 PF01297 Zinc-uptake complex component A periplasmic UGYR_RS01020 PF08525 Opacity-associated protein A N-terminal motif UGYR_RS01020 PF01476 LysM domain UGYR_RS01020 PF01551 Peptidase family M23 UGYR_RS01025 PF03279 Bacterial lipid A biosynthesis acyltransferase UGYR_RS01030 PF00224 Pyruvate kinase, barrel domain UGYR_RS01030 PF02887 Pyruvate kinase, alpha/beta domain UGYR_RS01035 PF01380 SIS domain UGYR_RS01035 PF01418 Helix-turn-helix domain, rpiR family UGYR_RS01040 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UGYR_RS01040 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UGYR_RS01045 PF01081 KDPG and KHG aldolase UGYR_RS01050 PF00893 Small Multidrug Resistance protein UGYR_RS01055 PF00893 Small Multidrug Resistance protein UGYR_RS01060 PF01042 Endoribonuclease L-PSP UGYR_RS01065 PF13307 Helicase C-terminal domain UGYR_RS01065 PF04851 Type III restriction enzyme, res subunit UGYR_RS01070 PF00814 Glycoprotease family UGYR_RS01075 PF03843 Outer membrane lipoprotein Slp family UGYR_RS01080 PF00501 AMP-binding enzyme UGYR_RS01080 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS01085 PF01612 3'-5' exonuclease UGYR_RS01085 PF00570 HRDC domain UGYR_RS01090 PF03776 Septum formation topological specificity factor MinE UGYR_RS01095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UGYR_RS01100 PF05209 Septum formation inhibitor MinC, N-terminal domain UGYR_RS01100 PF03775 Septum formation inhibitor MinC, C-terminal domain UGYR_RS01105 PF05166 YcgL domain UGYR_RS01110 PF01557 Fumarylacetoacetate (FAA) hydrolase family UGYR_RS01115 PF03692 Putative zinc- or iron-chelating domain UGYR_RS01125 PF02600 Disulfide bond formation protein DsbB UGYR_RS01130 PF06450 Bacterial Na+/H+ antiporter B (NhaB) UGYR_RS01135 PF00392 Bacterial regulatory proteins, gntR family UGYR_RS01135 PF07840 FadR C-terminal domain UGYR_RS01140 PF04293 SpoVR like protein UGYR_RS01145 PF01266 FAD dependent oxidoreductase UGYR_RS01150 PF01168 Alanine racemase, N-terminal domain UGYR_RS01150 PF00842 Alanine racemase, C-terminal domain UGYR_RS01155 PF07690 Major Facilitator Superfamily UGYR_RS01165 PF13426 PAS domain UGYR_RS01165 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS01165 PF00563 EAL domain UGYR_RS01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS01170 PF03466 LysR substrate binding domain UGYR_RS01175 PF03306 Alpha-acetolactate decarboxylase UGYR_RS01180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UGYR_RS01180 PF00205 Thiamine pyrophosphate enzyme, central domain UGYR_RS01180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UGYR_RS01185 PF04285 Protein of unknown function (DUF444) UGYR_RS01190 PF08298 PrkA AAA domain UGYR_RS01190 PF06798 PrkA serine protein kinase C-terminal domain UGYR_RS01195 PF06629 MltA-interacting protein MipA UGYR_RS01200 PF00884 Sulfatase UGYR_RS01205 PF01263 Aldose 1-epimerase UGYR_RS01210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UGYR_RS01210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UGYR_RS01215 PF01641 SelR domain UGYR_RS01220 PF07023 Protein of unknown function (DUF1315) UGYR_RS01225 PF00857 Isochorismatase family UGYR_RS01230 PF17763 Glutaminase/Asparaginase C-terminal domain UGYR_RS01230 PF00710 Asparaginase, N-terminal UGYR_RS01235 PF01343 Peptidase family S49 UGYR_RS01240 PF00881 Nitroreductase family UGYR_RS01245 PF02769 AIR synthase related protein, C-terminal domain UGYR_RS01245 PF00586 AIR synthase related protein, N-terminal domain UGYR_RS01250 PF01131 DNA topoisomerase UGYR_RS01250 PF01751 Toprim domain UGYR_RS01255 PF07383 Protein of unknown function (DUF1496) UGYR_RS01260 PF00293 NUDIX domain UGYR_RS01265 PF03372 Endonuclease/Exonuclease/phosphatase family UGYR_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS01280 PF03466 LysR substrate binding domain UGYR_RS01295 PF01842 ACT domain UGYR_RS01295 PF00551 Formyl transferase UGYR_RS01300 PF02810 SEC-C motif UGYR_RS01305 PF01734 Patatin-like phospholipase UGYR_RS01310 PF00072 Response regulator receiver domain UGYR_RS01315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UGYR_RS01315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UGYR_RS01315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UGYR_RS01320 PF00816 H-NS histone family UGYR_RS01325 PF00265 Thymidine kinase UGYR_RS01330 PF00171 Aldehyde dehydrogenase family UGYR_RS01330 PF00465 Iron-containing alcohol dehydrogenase UGYR_RS01335 PF01914 MarC family integral membrane protein UGYR_RS01345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS01350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS01360 PF12911 N-terminal TM domain of oligopeptide transport permease C UGYR_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS01365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UGYR_RS01365 PF00005 ABC transporter UGYR_RS01370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UGYR_RS01370 PF00005 ABC transporter UGYR_RS01375 PF04269 Protein of unknown function, DUF440 UGYR_RS01380 PF13091 PLD-like domain UGYR_RS01380 PF13396 Phospholipase_D-nuclease N-terminal UGYR_RS01400 PF03795 YCII-related domain UGYR_RS01425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS01425 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS01430 PF13953 PapC C-terminal domain UGYR_RS01430 PF13954 PapC N-terminal domain UGYR_RS01430 PF00577 Outer membrane usher protein UGYR_RS01450 PF03544 Gram-negative bacterial TonB protein C-terminal UGYR_RS01455 PF03061 Thioesterase superfamily UGYR_RS01460 PF04279 Intracellular septation protein A UGYR_RS01465 PF01740 STAS domain UGYR_RS01465 PF00916 Sulfate permease family UGYR_RS01475 PF03692 Putative zinc- or iron-chelating domain UGYR_RS01480 PF03922 OmpW family UGYR_RS01490 PF00290 Tryptophan synthase alpha chain UGYR_RS01495 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS01500 PF00218 Indole-3-glycerol phosphate synthase UGYR_RS01500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UGYR_RS01505 PF00591 Glycosyl transferase family, a/b domain UGYR_RS01505 PF02885 Glycosyl transferase family, helical bundle domain UGYR_RS01510 PF00117 Glutamine amidotransferase class-I UGYR_RS01515 PF04715 Anthranilate synthase component I, N terminal region UGYR_RS01515 PF00425 chorismate binding enzyme UGYR_RS01520 PF02811 PHP domain UGYR_RS01525 PF01300 Telomere recombination UGYR_RS01530 PF01479 S4 domain UGYR_RS01530 PF00849 RNA pseudouridylate synthase UGYR_RS01535 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP UGYR_RS01540 PF00106 short chain dehydrogenase UGYR_RS01545 PF01343 Peptidase family S49 UGYR_RS01545 PF08496 Peptidase family S49 N-terminal UGYR_RS01550 PF10692 Protein of unknown function (DUF2498) UGYR_RS01555 PF08272 Topoisomerase I zinc-ribbon-like UGYR_RS01555 PF01131 DNA topoisomerase UGYR_RS01555 PF01396 Topoisomerase DNA binding C4 zinc finger UGYR_RS01555 PF01751 Toprim domain UGYR_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS01560 PF03466 LysR substrate binding domain UGYR_RS01575 PF00330 Aconitase family (aconitate hydratase) UGYR_RS01575 PF00694 Aconitase C-terminal domain UGYR_RS01580 PF00925 GTP cyclohydrolase II UGYR_RS01585 PF01569 PAP2 superfamily UGYR_RS01590 PF06305 Lipopolysaccharide assembly protein A domain UGYR_RS01595 PF18073 Rubredoxin metal binding domain UGYR_RS01605 PF07338 Protein of unknown function (DUF1471) UGYR_RS01610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UGYR_RS01615 PF01253 Translation initiation factor SUI1 UGYR_RS01620 PF05433 Glycine zipper 2TM domain UGYR_RS01625 PF00923 Transaldolase/Fructose-6-phosphate aldolase UGYR_RS01630 PF08448 PAS fold UGYR_RS01630 PF00563 EAL domain UGYR_RS01630 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS01630 PF05231 MASE1 UGYR_RS01630 PF13426 PAS domain UGYR_RS01630 PF08447 PAS fold UGYR_RS01635 PF00575 S1 RNA binding domain UGYR_RS01635 PF00773 RNB domain UGYR_RS01635 PF08206 Ribonuclease B OB domain UGYR_RS01640 PF00730 HhH-GPD superfamily base excision DNA repair protein UGYR_RS01640 PF00633 Helix-hairpin-helix motif UGYR_RS01640 PF10576 Iron-sulfur binding domain of endonuclease III UGYR_RS01645 PF02508 Rnf-Nqr subunit, membrane protein UGYR_RS01650 PF04205 FMN-binding domain UGYR_RS01655 PF03116 NQR2, RnfD, RnfE family UGYR_RS01660 PF12833 Helix-turn-helix domain UGYR_RS01660 PF06445 GyrI-like small molecule binding domain UGYR_RS01665 PF10531 SLBB domain UGYR_RS01665 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit UGYR_RS01665 PF13375 RnfC Barrel sandwich hybrid domain UGYR_RS01665 PF13237 4Fe-4S dicluster domain UGYR_RS01670 PF04060 Putative Fe-S cluster UGYR_RS01675 PF02508 Rnf-Nqr subunit, membrane protein UGYR_RS01680 PF10754 Protein of unknown function (DUF2569) UGYR_RS01685 PF01268 Formate--tetrahydrofolate ligase UGYR_RS01690 PF09313 Domain of unknown function (DUF1971) UGYR_RS01690 PF03848 Tellurite resistance protein TehB UGYR_RS01695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UGYR_RS01695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UGYR_RS01700 PF13593 SBF-like CPA transporter family (DUF4137) UGYR_RS01705 PF00962 Adenosine/AMP deaminase UGYR_RS01710 PF06097 Bacterial protein of unknown function (DUF945) UGYR_RS01715 PF01238 Phosphomannose isomerase type I UGYR_RS01720 PF10415 Fumarase C C-terminus UGYR_RS01720 PF00206 Lyase UGYR_RS01725 PF05472 DNA replication terminus site-binding protein (Ter protein) UGYR_RS01730 PF00480 ROK family UGYR_RS01740 PF00654 Voltage gated chloride channel UGYR_RS01745 PF06649 Protein of unknown function (DUF1161) UGYR_RS01750 PF06932 Protein of unknown function (DUF1283) UGYR_RS01755 PF02694 Uncharacterised BCR, YnfA/UPF0060 family UGYR_RS01760 PF00106 short chain dehydrogenase UGYR_RS01765 PF01510 N-acetylmuramoyl-L-alanine amidase UGYR_RS01785 PF01048 Phosphorylase superfamily UGYR_RS01785 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus UGYR_RS01825 PF13419 Haloacid dehalogenase-like hydrolase UGYR_RS01835 PF06445 GyrI-like small molecule binding domain UGYR_RS01840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UGYR_RS01840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UGYR_RS01845 PF13545 Crp-like helix-turn-helix domain UGYR_RS01845 PF00027 Cyclic nucleotide-binding domain UGYR_RS01850 PF00582 Universal stress protein family UGYR_RS01860 PF00455 DeoR C terminal sensor domain UGYR_RS01860 PF08220 DeoR-like helix-turn-helix domain UGYR_RS01865 PF03611 PTS system sugar-specific permease component UGYR_RS01870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UGYR_RS01875 PF00596 Class II Aldolase and Adducin N-terminal domain UGYR_RS01880 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UGYR_RS01885 PF01261 Xylose isomerase-like TIM barrel UGYR_RS01890 PF02233 NAD(P) transhydrogenase beta subunit UGYR_RS01895 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch UGYR_RS01895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UGYR_RS01895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain UGYR_RS01900 PF07338 Protein of unknown function (DUF1471) UGYR_RS01905 PF13520 Amino acid permease UGYR_RS01915 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS01915 PF00072 Response regulator receiver domain UGYR_RS01920 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS01920 PF00672 HAMP domain UGYR_RS01925 PF00080 Copper/zinc superoxide dismutase (SODC) UGYR_RS01935 PF12833 Helix-turn-helix domain UGYR_RS01940 PF01161 Phosphatidylethanolamine-binding protein UGYR_RS01950 PF00089 Trypsin UGYR_RS01955 PF00270 DEAD/DEAH box helicase UGYR_RS01955 PF11898 Domain of unknown function (DUF3418) UGYR_RS01955 PF04408 Helicase associated domain (HA2) UGYR_RS01955 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold UGYR_RS01955 PF00271 Helicase conserved C-terminal domain UGYR_RS01965 PF02525 Flavodoxin-like fold UGYR_RS01970 PF07027 Protein of unknown function (DUF1318) UGYR_RS01975 PF13617 YnbE-like lipoprotein UGYR_RS01985 PF11739 Dicarboxylate transport UGYR_RS01990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UGYR_RS01990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UGYR_RS01995 PF03724 META domain UGYR_RS02000 PF03891 Domain of unknown function (DUF333) UGYR_RS02005 PF02308 MgtC family UGYR_RS02010 PF00893 Small Multidrug Resistance protein UGYR_RS02015 PF10371 Domain of unknown function UGYR_RS02015 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II UGYR_RS02015 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase UGYR_RS02015 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg UGYR_RS02015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UGYR_RS02020 PF01171 PP-loop family UGYR_RS02025 PF01544 CorA-like Mg2+ transporter protein UGYR_RS02030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS02035 PF00246 Zinc carboxypeptidase UGYR_RS02040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UGYR_RS02040 PF13378 Enolase C-terminal domain-like UGYR_RS02045 PF08534 Redoxin UGYR_RS02050 PF18024 Helix-turn-helix domain UGYR_RS02050 PF00158 Sigma-54 interaction domain UGYR_RS02055 PF09722 Protein of unknown function (DUF2384) UGYR_RS02065 PF05128 Domain of unknown function (DUF697) UGYR_RS02070 PF04317 YcjX-like family, DUF463 UGYR_RS02075 PF09584 Phage shock protein PspD (Phageshock_PspD) UGYR_RS02080 PF04024 PspC domain UGYR_RS02085 PF06667 Phage shock protein B UGYR_RS02090 PF04012 PspA/IM30 family UGYR_RS02095 PF02954 Bacterial regulatory protein, Fis family UGYR_RS02095 PF00158 Sigma-54 interaction domain UGYR_RS02105 PF02917 Pertussis toxin, subunit 1 UGYR_RS02115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS02120 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS02125 PF12911 N-terminal TM domain of oligopeptide transport permease C UGYR_RS02125 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS02130 PF00005 ABC transporter UGYR_RS02130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UGYR_RS02135 PF00005 ABC transporter UGYR_RS02145 PF00854 POT family UGYR_RS02155 PF00226 DnaJ domain UGYR_RS02155 PF01556 DnaJ C terminal domain UGYR_RS02165 PF04893 Yip1 domain UGYR_RS02175 PF11656 YjbD family (DUF3811) UGYR_RS02180 PF02798 Glutathione S-transferase, N-terminal domain UGYR_RS02180 PF00043 Glutathione S-transferase, C-terminal domain UGYR_RS02185 PF08543 Phosphomethylpyrimidine kinase UGYR_RS02190 PF00579 tRNA synthetases class I (W and Y) UGYR_RS02190 PF01479 S4 domain UGYR_RS02195 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region UGYR_RS02195 PF01243 Pyridoxamine 5'-phosphate oxidase UGYR_RS02200 PF03702 Anhydro-N-acetylmuramic acid kinase UGYR_RS02205 PF05433 Glycine zipper 2TM domain UGYR_RS02210 PF01047 MarR family UGYR_RS02215 PF00248 Aldo/keto reductase family UGYR_RS02220 PF06945 Protein of unknown function (DUF1289) UGYR_RS02225 PF00884 Sulfatase UGYR_RS02225 PF08019 Phosphoethanolamine transferase EptA/EptB UGYR_RS02230 PF00440 Bacterial regulatory proteins, tetR family UGYR_RS02230 PF16925 Tetracyclin repressor-like, C-terminal domain UGYR_RS02235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UGYR_RS02240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UGYR_RS02245 PF00929 Exonuclease UGYR_RS02250 PF00462 Glutaredoxin UGYR_RS02255 PF00877 NlpC/P60 family UGYR_RS02260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UGYR_RS02260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UGYR_RS02265 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS02270 PF03466 LysR substrate binding domain UGYR_RS02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS02275 PF07690 Major Facilitator Superfamily UGYR_RS02285 PF00677 Lumazine binding domain UGYR_RS02290 PF01554 MatE UGYR_RS02315 PF02887 Pyruvate kinase, alpha/beta domain UGYR_RS02315 PF00224 Pyruvate kinase, barrel domain UGYR_RS02320 PF04728 Lipoprotein leucine-zipper UGYR_RS02325 PF17969 L,D-transpeptidase C-terminal domain UGYR_RS02325 PF01476 LysM domain UGYR_RS02325 PF03734 L,D-transpeptidase catalytic domain UGYR_RS02330 PF02657 Fe-S metabolism associated domain UGYR_RS02335 PF00266 Aminotransferase class-V UGYR_RS02340 PF01458 Uncharacterized protein family (UPF0051) UGYR_RS02345 PF00005 ABC transporter UGYR_RS02350 PF01458 Uncharacterized protein family (UPF0051) UGYR_RS02355 PF01521 Iron-sulphur cluster biosynthesis UGYR_RS02360 PF03061 Thioesterase superfamily UGYR_RS02365 PF02913 FAD linked oxidases, C-terminal domain UGYR_RS02365 PF01565 FAD binding domain UGYR_RS02365 PF13183 4Fe-4S dicluster domain UGYR_RS02370 PF01594 AI-2E family transporter UGYR_RS02375 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain UGYR_RS02375 PF00391 PEP-utilising enzyme, mobile domain UGYR_RS02375 PF02896 PEP-utilising enzyme, TIM barrel domain UGYR_RS02380 PF03618 Kinase/pyrophosphorylase UGYR_RS02385 PF00793 DAHP synthetase I family UGYR_RS02390 PF00593 TonB dependent receptor UGYR_RS02390 PF07715 TonB-dependent Receptor Plug Domain UGYR_RS02395 PF05171 Haemin-degrading HemS.ChuX domain UGYR_RS02400 PF01497 Periplasmic binding protein UGYR_RS02405 PF01032 FecCD transport family UGYR_RS02410 PF00005 ABC transporter UGYR_RS02415 PF02696 Uncharacterized ACR, YdiU/UPF0061 family UGYR_RS02420 PF10437 Bacterial lipoate protein ligase C-terminus UGYR_RS02420 PF03099 Biotin/lipoate A/B protein ligase family UGYR_RS02425 PF00877 NlpC/P60 family UGYR_RS02435 PF00892 EamA-like transporter family UGYR_RS02440 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase UGYR_RS02445 PF01522 Polysaccharide deacetylase UGYR_RS02450 PF01370 NAD dependent epimerase/dehydratase family UGYR_RS02450 PF00551 Formyl transferase UGYR_RS02450 PF02911 Formyl transferase, C-terminal domain UGYR_RS02455 PF00535 Glycosyl transferase family 2 UGYR_RS02460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UGYR_RS02465 PF00005 ABC transporter UGYR_RS02470 PF01032 FecCD transport family UGYR_RS02480 PF02899 Phage integrase, N-terminal SAM-like domain UGYR_RS02480 PF00589 Phage integrase family UGYR_RS02510 PF04606 Ogr/Delta-like zinc finger UGYR_RS02515 PF05154 TM2 domain UGYR_RS02520 PF00216 Bacterial DNA-binding protein UGYR_RS02525 PF03483 B3/4 domain UGYR_RS02525 PF03147 Ferredoxin-fold anticodon binding domain UGYR_RS02525 PF01588 Putative tRNA binding domain UGYR_RS02525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UGYR_RS02525 PF03484 tRNA synthetase B5 domain UGYR_RS02530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UGYR_RS02530 PF01409 tRNA synthetases class II core domain (F) UGYR_RS02535 PF00453 Ribosomal protein L20 UGYR_RS02540 PF01632 Ribosomal protein L35 UGYR_RS02545 PF05198 Translation initiation factor IF-3, N-terminal domain UGYR_RS02545 PF00707 Translation initiation factor IF-3, C-terminal domain UGYR_RS02550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UGYR_RS02550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UGYR_RS02550 PF02824 TGS domain UGYR_RS02550 PF03129 Anticodon binding domain UGYR_RS02585 PF01914 MarC family integral membrane protein UGYR_RS02590 PF01464 Transglycosylase SLT domain UGYR_RS02595 PF01297 Zinc-uptake complex component A periplasmic UGYR_RS02600 PF00005 ABC transporter UGYR_RS02605 PF00950 ABC 3 transport family UGYR_RS02610 PF00950 ABC 3 transport family UGYR_RS02615 PF03881 Fructosamine kinase UGYR_RS02620 PF14002 YniB-like protein UGYR_RS02625 PF13419 Haloacid dehalogenase-like hydrolase UGYR_RS02630 PF04307 LexA-binding, inner membrane-associated putative hydrolase UGYR_RS02635 PF00375 Sodium:dicarboxylate symporter family UGYR_RS02640 PF01510 N-acetylmuramoyl-L-alanine amidase UGYR_RS02645 PF09339 IclR helix-turn-helix domain UGYR_RS02645 PF01614 Bacterial transcriptional regulator UGYR_RS02650 PF07690 Major Facilitator Superfamily UGYR_RS02655 PF01435 Peptidase family M48 UGYR_RS02660 PF03572 Peptidase family S41 UGYR_RS02660 PF11818 C-terminal domain of tail specific protease (DUF3340) UGYR_RS02660 PF00595 PDZ domain UGYR_RS02660 PF17804 Tail specific protease N-terminal domain UGYR_RS02665 PF04352 ProQ/FINO family UGYR_RS02665 PF17516 ProQ C-terminal domain UGYR_RS02670 PF13185 GAF domain UGYR_RS02675 PF04403 Paraquat-inducible protein A UGYR_RS02680 PF02470 MlaD protein UGYR_RS02685 PF00563 EAL domain UGYR_RS02685 PF00360 Phytochrome region UGYR_RS02685 PF01590 GAF domain UGYR_RS02685 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS02690 PF07351 Protein of unknown function (DUF1480) UGYR_RS02705 PF05643 Putative bacterial lipoprotein (DUF799) UGYR_RS02715 PF03783 Curli production assembly/transport component CsgG UGYR_RS02720 PF10753 Toxin GhoT_OrtT UGYR_RS02740 PF00144 Beta-lactamase UGYR_RS02755 PF07022 Bacteriophage CI repressor helix-turn-helix domain UGYR_RS02755 PF16452 Bacteriophage CI repressor C-terminal domain UGYR_RS02785 PF05840 Bacteriophage replication gene A protein (GPA) UGYR_RS02890 PF07484 Phage Tail Collar Domain UGYR_RS02895 PF02413 Caudovirales tail fibre assembly protein, lambda gpK UGYR_RS02935 PF04606 Ogr/Delta-like zinc finger UGYR_RS02940 PF02899 Phage integrase, N-terminal SAM-like domain UGYR_RS02940 PF00589 Phage integrase family UGYR_RS02945 PF10709 Protein of unknown function (DUF2511) UGYR_RS02950 PF05425 Copper resistance protein D UGYR_RS02955 PF04234 CopC domain UGYR_RS02960 PF00210 Ferritin-like domain UGYR_RS02965 PF06440 DNA polymerase III, theta subunit UGYR_RS02970 PF00561 alpha/beta hydrolase fold UGYR_RS02975 PF00929 Exonuclease UGYR_RS02980 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain UGYR_RS02980 PF00326 Prolyl oligopeptidase family UGYR_RS02985 PF13995 YebF-like protein UGYR_RS02990 PF04266 ASCH domain UGYR_RS02995 PF07130 YebG protein UGYR_RS03000 PF00271 Helicase conserved C-terminal domain UGYR_RS03000 PF00270 DEAD/DEAH box helicase UGYR_RS03000 PF03880 DbpA RNA binding domain UGYR_RS03005 PF02222 ATP-grasp domain UGYR_RS03010 PF03701 Uncharacterised protein family (UPF0181) UGYR_RS03015 PF00425 chorismate binding enzyme UGYR_RS03015 PF04715 Anthranilate synthase component I, N terminal region UGYR_RS03020 PF00293 NUDIX domain UGYR_RS03025 PF03313 Serine dehydratase alpha chain UGYR_RS03025 PF03315 Serine dehydratase beta chain UGYR_RS03030 PF03741 Integral membrane protein TerC family UGYR_RS03030 PF03471 Transporter associated domain UGYR_RS03035 PF03610 PTS system fructose IIA component UGYR_RS03035 PF03830 PTS system sorbose subfamily IIB component UGYR_RS03040 PF03609 PTS system sorbose-specific iic component UGYR_RS03045 PF03613 PTS system mannose/fructose/sorbose family IID component UGYR_RS03050 PF06173 Protein of unknown function (DUF986) UGYR_RS03055 PF02659 Putative manganese efflux pump UGYR_RS03060 PF02441 Flavoprotein UGYR_RS03075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UGYR_RS03075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UGYR_RS03075 PF02770 Acyl-CoA dehydrogenase, middle domain UGYR_RS03085 PF05199 GMC oxidoreductase UGYR_RS03085 PF00732 GMC oxidoreductase UGYR_RS03090 PF00550 Phosphopantetheine attachment site UGYR_RS03090 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS03090 PF00501 AMP-binding enzyme UGYR_RS03090 PF00668 Condensation domain UGYR_RS03095 PF07690 Major Facilitator Superfamily UGYR_RS03115 PF13847 Methyltransferase domain UGYR_RS03120 PF03717 Penicillin-binding Protein dimerisation domain UGYR_RS03120 PF00905 Penicillin binding protein transpeptidase domain UGYR_RS03125 PF02578 Multi-copper polyphenol oxidoreductase laccase UGYR_RS03130 PF00313 'Cold-shock' DNA-binding domain UGYR_RS03135 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP UGYR_RS03140 PF00324 Amino acid permease UGYR_RS03155 PF13974 YebO-like protein UGYR_RS03160 PF13998 MgrB protein UGYR_RS03165 PF13996 YobH-like protein UGYR_RS03170 PF10964 Protein of unknown function (DUF2766) UGYR_RS03180 PF12833 Helix-turn-helix domain UGYR_RS03190 PF13520 Amino acid permease UGYR_RS03195 PF00664 ABC transporter transmembrane region UGYR_RS03195 PF00005 ABC transporter UGYR_RS03205 PF00563 EAL domain UGYR_RS03205 PF01590 GAF domain UGYR_RS03205 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS03205 PF00360 Phytochrome region UGYR_RS03210 PF03372 Endonuclease/Exonuclease/phosphatase family UGYR_RS03220 PF06411 HdeA/HdeB family UGYR_RS03225 PF07478 D-ala D-ala ligase C-terminus UGYR_RS03225 PF01820 D-ala D-ala ligase N-terminus UGYR_RS03240 PF08241 Methyltransferase domain UGYR_RS03245 PF00313 'Cold-shock' DNA-binding domain UGYR_RS03250 PF00313 'Cold-shock' DNA-binding domain UGYR_RS03260 PF04794 YdjC-like protein UGYR_RS03265 PF07883 Cupin domain UGYR_RS03265 PF12833 Helix-turn-helix domain UGYR_RS03270 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UGYR_RS03275 PF00232 Glycosyl hydrolase family 1 UGYR_RS03280 PF02378 Phosphotransferase system, EIIC UGYR_RS03285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UGYR_RS03295 PF00849 RNA pseudouridylate synthase UGYR_RS03295 PF01479 S4 domain UGYR_RS03305 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) UGYR_RS03310 PF03553 Na+/H+ antiporter family UGYR_RS03320 PF13520 Amino acid permease UGYR_RS03335 PF00849 RNA pseudouridylate synthase UGYR_RS03340 PF00282 Pyridoxal-dependent decarboxylase conserved domain UGYR_RS03345 PF13520 Amino acid permease UGYR_RS03350 PF04960 Glutaminase UGYR_RS03380 PF13673 Acetyltransferase (GNAT) domain UGYR_RS03395 PF00034 Cytochrome c UGYR_RS03395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UGYR_RS03410 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS03415 PF00005 ABC transporter UGYR_RS03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS03425 PF02203 Tar ligand binding domain homologue UGYR_RS03425 PF00672 HAMP domain UGYR_RS03450 PF01066 CDP-alcohol phosphatidyltransferase UGYR_RS03455 PF02151 UvrB/uvrC motif UGYR_RS03455 PF01541 GIY-YIG catalytic domain UGYR_RS03455 PF08459 UvrC Helix-hairpin-helix N-terminal UGYR_RS03460 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS03460 PF00072 Response regulator receiver domain UGYR_RS03465 PF10769 Protein of unknown function (DUF2594) UGYR_RS03480 PF00324 Amino acid permease UGYR_RS03485 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UGYR_RS03485 PF01276 Orn/Lys/Arg decarboxylase, major domain UGYR_RS03485 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain UGYR_RS03490 PF13520 Amino acid permease UGYR_RS03495 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS03495 PF18500 CadC C-terminal domain 1 UGYR_RS03500 PF00474 Sodium:solute symporter family UGYR_RS03505 PF00171 Aldehyde dehydrogenase family UGYR_RS03505 PF18327 Proline utilization A proline dehydrogenase N-terminal domain UGYR_RS03505 PF01619 Proline dehydrogenase UGYR_RS03505 PF14850 DNA-binding domain of Proline dehydrogenase UGYR_RS03510 PF00005 ABC transporter UGYR_RS03515 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS03520 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS03525 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS03530 PF02899 Phage integrase, N-terminal SAM-like domain UGYR_RS03535 PF04542 Sigma-70 region 2 UGYR_RS03535 PF04539 Sigma-70 region 3 UGYR_RS03535 PF04545 Sigma-70, region 4 UGYR_RS03540 PF00669 Bacterial flagellin N-terminal helical region UGYR_RS03540 PF08884 Flagellin D3 domain UGYR_RS03540 PF00700 Bacterial flagellin C-terminal helical region UGYR_RS03545 PF00700 Bacterial flagellin C-terminal helical region UGYR_RS03545 PF00669 Bacterial flagellin N-terminal helical region UGYR_RS03545 PF08884 Flagellin D3 domain UGYR_RS03550 PF00669 Bacterial flagellin N-terminal helical region UGYR_RS03550 PF08884 Flagellin D3 domain UGYR_RS03550 PF00700 Bacterial flagellin C-terminal helical region UGYR_RS03555 PF02465 Flagellar hook-associated protein 2 N-terminus UGYR_RS03555 PF07196 Flagellin hook IN motif UGYR_RS03555 PF07195 Flagellar hook-associated protein 2 C-terminus UGYR_RS03560 PF02561 Flagellar protein FliS UGYR_RS03565 PF05400 Flagellar protein FliT UGYR_RS03570 PF12833 Helix-turn-helix domain UGYR_RS03575 PF01966 HD domain UGYR_RS03580 PF02254 TrkA-N domain UGYR_RS03580 PF07885 Ion channel UGYR_RS03585 PF01223 DNA/RNA non-specific endonuclease UGYR_RS03595 PF02049 Flagellar hook-basal body complex protein FliE UGYR_RS03600 PF01514 Secretory protein of YscJ/FliF family UGYR_RS03600 PF08345 Flagellar M-ring protein C-terminal UGYR_RS03605 PF14841 FliG middle domain UGYR_RS03605 PF01706 FliG C-terminal domain UGYR_RS03605 PF14842 FliG N-terminal domain UGYR_RS03610 PF02108 Flagellar assembly protein FliH UGYR_RS03615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UGYR_RS03615 PF18269 T3SS EscN ATPase C-terminal domain UGYR_RS03620 PF02050 Flagellar FliJ protein UGYR_RS03625 PF02120 Flagellar hook-length control protein FliK UGYR_RS03630 PF03748 Flagellar basal body-associated protein FliL UGYR_RS03635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UGYR_RS03635 PF02154 Flagellar motor switch protein FliM UGYR_RS03640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UGYR_RS03640 PF16973 Flagellar motor switch protein FliN N-terminal UGYR_RS03645 PF04347 Flagellar biosynthesis protein, FliO UGYR_RS03650 PF00813 FliP family UGYR_RS03655 PF01313 Bacterial export proteins, family 3 UGYR_RS03660 PF01311 Bacterial export proteins, family 1 UGYR_RS03665 PF00669 Bacterial flagellin N-terminal helical region UGYR_RS03670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UGYR_RS03670 PF00460 Flagella basal body rod protein UGYR_RS03675 PF10135 Rod binding protein UGYR_RS03675 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UGYR_RS03680 PF02119 Flagellar P-ring protein UGYR_RS03685 PF02107 Flagellar L-ring protein UGYR_RS03690 PF00460 Flagella basal body rod protein UGYR_RS03690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UGYR_RS03695 PF00460 Flagella basal body rod protein UGYR_RS03695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UGYR_RS03700 PF00460 Flagella basal body rod protein UGYR_RS03700 PF07559 Flagellar basal body protein FlaE UGYR_RS03700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UGYR_RS03705 PF03963 Flagellar hook capping protein - N-terminal region UGYR_RS03705 PF13860 FlgD Ig-like domain UGYR_RS03705 PF13861 FlgD Tudor-like domain UGYR_RS03710 PF00460 Flagella basal body rod protein UGYR_RS03710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UGYR_RS03715 PF00460 Flagella basal body rod protein UGYR_RS03720 PF17656 FlgA N-terminal domain UGYR_RS03720 PF13144 Chaperone for flagella basal body P-ring formation UGYR_RS03725 PF04316 Anti-sigma-28 factor, FlgM UGYR_RS03730 PF05130 FlgN protein UGYR_RS03740 PF06366 Flagellar protein FlhE UGYR_RS03745 PF00771 FHIPEP family UGYR_RS03750 PF01312 FlhB HrpN YscU SpaS Family UGYR_RS03755 PF01483 Proprotein convertase P-domain UGYR_RS03755 PF00082 Subtilase family UGYR_RS03760 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS03770 PF00419 Fimbrial protein UGYR_RS03780 PF13953 PapC C-terminal domain UGYR_RS03780 PF13954 PapC N-terminal domain UGYR_RS03780 PF00577 Outer membrane usher protein UGYR_RS03785 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS03785 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS03795 PF00419 Fimbrial protein UGYR_RS03825 PF04344 Chemotaxis phosphatase, CheZ UGYR_RS03830 PF00072 Response regulator receiver domain UGYR_RS03835 PF01339 CheB methylesterase UGYR_RS03835 PF00072 Response regulator receiver domain UGYR_RS03840 PF01739 CheR methyltransferase, SAM binding domain UGYR_RS03840 PF03705 CheR methyltransferase, all-alpha domain UGYR_RS03845 PF00672 HAMP domain UGYR_RS03845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS03845 PF02203 Tar ligand binding domain homologue UGYR_RS03850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS03850 PF02203 Tar ligand binding domain homologue UGYR_RS03850 PF00672 HAMP domain UGYR_RS03855 PF01584 CheW-like domain UGYR_RS03860 PF02895 Signal transducing histidine kinase, homodimeric domain UGYR_RS03860 PF01584 CheW-like domain UGYR_RS03860 PF01627 Hpt domain UGYR_RS03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS03860 PF09078 CheY binding UGYR_RS03865 PF00691 OmpA family UGYR_RS03865 PF13677 Membrane MotB of proton-channel complex MotA/MotB UGYR_RS03870 PF01618 MotA/TolQ/ExbB proton channel family UGYR_RS03875 PF05280 Flagellar transcriptional activator (FlhC) UGYR_RS03880 PF05247 Flagellar transcriptional activator (FlhD) UGYR_RS03890 PF00582 Universal stress protein family UGYR_RS03895 PF02308 MgtC family UGYR_RS03900 PF00672 HAMP domain UGYR_RS03900 PF02203 Tar ligand binding domain homologue UGYR_RS03900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS03905 PF10781 Dextransucrase DSRB UGYR_RS03910 PF00313 'Cold-shock' DNA-binding domain UGYR_RS03920 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS03925 PF16353 Domain of unknown function(DUF4981) UGYR_RS03925 PF02837 Glycosyl hydrolases family 2, sugar binding domain UGYR_RS03925 PF00703 Glycosyl hydrolases family 2 UGYR_RS03925 PF02929 Beta galactosidase small chain UGYR_RS03925 PF02836 Glycosyl hydrolases family 2, TIM barrel domain UGYR_RS03930 PF14765 Polyketide synthase dehydratase UGYR_RS03930 PF08240 Alcohol dehydrogenase GroES-like domain UGYR_RS03930 PF00107 Zinc-binding dehydrogenase UGYR_RS03930 PF00698 Acyl transferase domain UGYR_RS03930 PF00550 Phosphopantetheine attachment site UGYR_RS03930 PF08659 KR domain UGYR_RS03930 PF02801 Beta-ketoacyl synthase, C-terminal domain UGYR_RS03930 PF16197 Ketoacyl-synthetase C-terminal extension UGYR_RS03930 PF00109 Beta-ketoacyl synthase, N-terminal domain UGYR_RS03935 PF10777 Inner membrane protein YlaC UGYR_RS03945 PF14001 YdfZ protein UGYR_RS03955 PF06167 Glucose-regulated metallo-peptidase M90 UGYR_RS03970 PF17837 4'-phosphopantetheinyl transferase N-terminal domain UGYR_RS03970 PF01648 4'-phosphopantetheinyl transferase superfamily UGYR_RS03975 PF00939 Sodium:sulfate symporter transmembrane region UGYR_RS03980 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase UGYR_RS03985 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase UGYR_RS03990 PF04223 Citrate lyase, alpha subunit (CitF) UGYR_RS03995 PF03328 HpcH/HpaI aldolase/citrate lyase family UGYR_RS04000 PF06857 Malonate decarboxylase delta subunit (MdcD) UGYR_RS04005 PF08218 Citrate lyase ligase C-terminal domain UGYR_RS04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS04010 PF00989 PAS fold UGYR_RS04010 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UGYR_RS04010 PF17203 Single cache domain 3 UGYR_RS04015 PF12431 Transcriptional regulator UGYR_RS04015 PF00072 Response regulator receiver domain UGYR_RS04020 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS04020 PF00072 Response regulator receiver domain UGYR_RS04025 PF05231 MASE1 UGYR_RS04025 PF07730 Histidine kinase UGYR_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS04030 PF07690 Major Facilitator Superfamily UGYR_RS04040 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS04045 PF08402 TOBE domain UGYR_RS04045 PF00005 ABC transporter UGYR_RS04060 PF04363 Protein of unknown function (DUF496) UGYR_RS04065 PF04632 Fusaric acid resistance protein family UGYR_RS04075 PF00929 Exonuclease UGYR_RS04075 PF08411 Exonuclease C-terminal UGYR_RS04080 PF13520 Amino acid permease UGYR_RS04085 PF00593 TonB dependent receptor UGYR_RS04085 PF07715 TonB-dependent Receptor Plug Domain UGYR_RS04090 PF00005 ABC transporter UGYR_RS04095 PF01032 FecCD transport family UGYR_RS04105 PF00324 Amino acid permease UGYR_RS04110 PF03466 LysR substrate binding domain UGYR_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS04125 PF03601 Conserved hypothetical protein 698 UGYR_RS04130 PF01261 Xylose isomerase-like TIM barrel UGYR_RS04135 PF02378 Phosphotransferase system, EIIC UGYR_RS04135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UGYR_RS04140 PF00294 pfkB family carbohydrate kinase UGYR_RS04145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UGYR_RS04145 PF00381 PTS HPr component phosphorylation site UGYR_RS04150 PF00293 NUDIX domain UGYR_RS04155 PF03264 NapC/NirT cytochrome c family, N-terminal region UGYR_RS04160 PF01568 Molydopterin dinucleotide binding domain UGYR_RS04160 PF00384 Molybdopterin oxidoreductase UGYR_RS04160 PF18364 Molybdopterin oxidoreductase N-terminal domain UGYR_RS04165 PF03692 Putative zinc- or iron-chelating domain UGYR_RS04170 PF03222 Tryptophan/tyrosine permease family UGYR_RS04175 PF01132 Elongation factor P (EF-P) OB domain UGYR_RS04175 PF09285 Elongation factor P, C-terminal UGYR_RS04175 PF08207 Elongation factor P (EF-P) KOW-like domain UGYR_RS04180 PF03786 D-mannonate dehydratase (UxuA) UGYR_RS04185 PF01232 Mannitol dehydrogenase Rossmann domain UGYR_RS04185 PF08125 Mannitol dehydrogenase C-terminal domain UGYR_RS04195 PF02492 CobW/HypB/UreG, nucleotide-binding domain UGYR_RS04195 PF07683 Cobalamin synthesis protein cobW C-terminal domain UGYR_RS04200 PF01569 PAP2 superfamily UGYR_RS04205 PF00877 NlpC/P60 family UGYR_RS04210 PF12792 CSS motif domain associated with EAL UGYR_RS04210 PF00563 EAL domain UGYR_RS04215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS04220 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS04225 PF12911 N-terminal TM domain of oligopeptide transport permease C UGYR_RS04225 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS04230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UGYR_RS04230 PF00005 ABC transporter UGYR_RS04235 PF13989 YejG-like protein UGYR_RS04240 PF07690 Major Facilitator Superfamily UGYR_RS04245 PF01479 S4 domain UGYR_RS04245 PF00849 RNA pseudouridylate synthase UGYR_RS04255 PF01386 Ribosomal L25p family UGYR_RS04265 PF07208 Protein of unknown function (DUF1414) UGYR_RS04275 PF00884 Sulfatase UGYR_RS04275 PF11893 Domain of unknown function (DUF3413) UGYR_RS04280 PF00884 Sulfatase UGYR_RS04280 PF11893 Domain of unknown function (DUF3413) UGYR_RS04295 PF00239 Resolvase, N terminal domain UGYR_RS04295 PF02796 Helix-turn-helix domain of resolvase UGYR_RS04300 PF02413 Caudovirales tail fibre assembly protein, lambda gpK UGYR_RS04305 PF02413 Caudovirales tail fibre assembly protein, lambda gpK UGYR_RS04315 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) UGYR_RS04320 PF04865 Baseplate J-like protein UGYR_RS04365 PF04984 Phage tail sheath protein subtilisin-like domain UGYR_RS04365 PF17482 Phage tail sheath C-terminal domain UGYR_RS04405 PF00574 Clp protease UGYR_RS04415 PF03354 Phage Terminase UGYR_RS04430 PF10549 ORF11CD3 domain UGYR_RS04430 PF09669 Phage regulatory protein Rha (Phage_pRha) UGYR_RS04435 PF03245 Bacteriophage Rz lysis protein UGYR_RS04465 PF06147 Protein of unknown function (DUF968) UGYR_RS04490 PF00145 C-5 cytosine-specific DNA methylase UGYR_RS04495 PF03354 Phage Terminase UGYR_RS04520 PF00717 Peptidase S24-like UGYR_RS04520 PF01381 Helix-turn-helix UGYR_RS04545 PF10065 Uncharacterized conserved protein (DUF2303) UGYR_RS04575 PF06183 DinI-like family UGYR_RS04580 PF12706 Beta-lactamase superfamily domain UGYR_RS04585 PF00144 Beta-lactamase UGYR_RS04590 PF13302 Acetyltransferase (GNAT) domain UGYR_RS04605 PF00267 Gram-negative porin UGYR_RS04610 PF07690 Major Facilitator Superfamily UGYR_RS04615 PF16359 RcsD-ABL domain UGYR_RS04615 PF01627 Hpt domain UGYR_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS04620 PF00072 Response regulator receiver domain UGYR_RS04620 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS04625 PF00072 Response regulator receiver domain UGYR_RS04625 PF09456 RcsC Alpha-Beta-Loop (ABL) UGYR_RS04625 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS04625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS04630 PF03989 DNA gyrase C-terminal domain, beta-propeller UGYR_RS04630 PF00521 DNA gyrase/topoisomerase IV, subunit A UGYR_RS04640 PF00317 Ribonucleotide reductase, all-alpha domain UGYR_RS04640 PF02867 Ribonucleotide reductase, barrel domain UGYR_RS04640 PF03477 ATP cone domain UGYR_RS04645 PF00268 Ribonucleotide reductase, small chain UGYR_RS04650 PF00111 2Fe-2S iron-sulfur cluster binding domain UGYR_RS04660 PF03974 Ecotin UGYR_RS04665 PF00994 Probable molybdopterin binding domain UGYR_RS04670 PF04138 GtrA-like protein UGYR_RS04675 PF00535 Glycosyl transferase family 2 UGYR_RS04685 PF03222 Tryptophan/tyrosine permease family UGYR_RS04690 PF07437 YfaZ precursor UGYR_RS04695 PF06628 Catalase-related immune-responsive UGYR_RS04695 PF00199 Catalase UGYR_RS04700 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS04700 PF00501 AMP-binding enzyme UGYR_RS04705 PF13378 Enolase C-terminal domain-like UGYR_RS04710 PF00378 Enoyl-CoA hydratase/isomerase UGYR_RS04715 PF12697 Alpha/beta hydrolase family UGYR_RS04720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UGYR_RS04720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UGYR_RS04720 PF16582 Middle domain of thiamine pyrophosphate UGYR_RS04725 PF00425 chorismate binding enzyme UGYR_RS04730 PF05957 Bacterial protein of unknown function (DUF883) UGYR_RS04735 PF06496 Protein of unknown function (DUF1097) UGYR_RS04740 PF00361 Proton-conducting membrane transporter UGYR_RS04745 PF00361 Proton-conducting membrane transporter UGYR_RS04750 PF00361 Proton-conducting membrane transporter UGYR_RS04750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UGYR_RS04755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UGYR_RS04760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 UGYR_RS04765 PF12838 4Fe-4S dicluster domain UGYR_RS04770 PF00146 NADH dehydrogenase UGYR_RS04775 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UGYR_RS04775 PF01568 Molydopterin dinucleotide binding domain UGYR_RS04775 PF00384 Molybdopterin oxidoreductase UGYR_RS04775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UGYR_RS04780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region UGYR_RS04780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit UGYR_RS04780 PF10531 SLBB domain UGYR_RS04790 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UGYR_RS04790 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UGYR_RS04795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UGYR_RS04800 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 UGYR_RS04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS04805 PF03466 LysR substrate binding domain UGYR_RS04815 PF00155 Aminotransferase class I and II UGYR_RS04825 PF03600 Citrate transporter UGYR_RS04825 PF02080 TrkA-C domain UGYR_RS04835 PF03887 YfbU domain UGYR_RS04840 PF04217 Protein of unknown function, DUF412 UGYR_RS04845 PF00871 Acetokinase family UGYR_RS04850 PF01515 Phosphate acetyl/butaryl transferase UGYR_RS04850 PF07085 DRTGG domain UGYR_RS04855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UGYR_RS04855 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS04860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UGYR_RS04870 PF03611 PTS system sugar-specific permease component UGYR_RS04875 PF00293 NUDIX domain UGYR_RS04880 PF12850 Calcineurin-like phosphoesterase superfamily domain UGYR_RS04890 PF00043 Glutathione S-transferase, C-terminal domain UGYR_RS04890 PF02798 Glutathione S-transferase, N-terminal domain UGYR_RS04895 PF08338 Domain of unknown function (DUF1731) UGYR_RS04895 PF01370 NAD dependent epimerase/dehydratase family UGYR_RS04900 PF00005 ABC transporter UGYR_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS04915 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS04920 PF02441 Flavoprotein UGYR_RS04925 PF00156 Phosphoribosyl transferase domain UGYR_RS04930 PF02674 Colicin V production protein UGYR_RS04935 PF05036 Sporulation related domain UGYR_RS04940 PF02875 Mur ligase family, glutamate ligase domain UGYR_RS04940 PF08245 Mur ligase middle domain UGYR_RS04945 PF17848 Acetyl-coA carboxylase zinc finger domain UGYR_RS04945 PF01039 Carboxyl transferase domain UGYR_RS04950 PF09335 SNARE associated Golgi protein UGYR_RS04955 PF01416 tRNA pseudouridine synthase UGYR_RS04960 PF01118 Semialdehyde dehydrogenase, NAD binding domain UGYR_RS04960 PF02774 Semialdehyde dehydrogenase, dimerisation domain UGYR_RS04965 PF11890 Domain of unknown function (DUF3410) UGYR_RS04965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UGYR_RS04965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UGYR_RS04985 PF00155 Aminotransferase class I and II UGYR_RS04990 PF00578 AhpC/TSA family UGYR_RS05010 PF01527 Transposase UGYR_RS05030 PF00109 Beta-ketoacyl synthase, N-terminal domain UGYR_RS05030 PF02801 Beta-ketoacyl synthase, C-terminal domain UGYR_RS05035 PF05430 S-adenosyl-L-methionine-dependent methyltransferase UGYR_RS05035 PF01266 FAD dependent oxidoreductase UGYR_RS05040 PF08891 YfcL protein UGYR_RS05045 PF04315 Elongation factor P hydroxylase UGYR_RS05050 PF01925 Sulfite exporter TauE/SafE UGYR_RS05055 PF03411 Penicillin-insensitive murein endopeptidase UGYR_RS05060 PF01264 Chorismate synthase UGYR_RS05065 PF05175 Methyltransferase small domain UGYR_RS05070 PF01713 Smr domain UGYR_RS05075 PF00300 Histidine phosphatase superfamily (branch 1) UGYR_RS05080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UGYR_RS05080 PF00378 Enoyl-CoA hydratase/isomerase UGYR_RS05080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UGYR_RS05085 PF02803 Thiolase, C-terminal domain UGYR_RS05085 PF00108 Thiolase, N-terminal domain UGYR_RS05090 PF04175 Protein of unknown function (DUF406) UGYR_RS05095 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) UGYR_RS05100 PF04333 MlaA lipoprotein UGYR_RS05105 PF03918 Cytochrome C biogenesis protein UGYR_RS05110 PF03918 Cytochrome C biogenesis protein UGYR_RS05115 PF08534 Redoxin UGYR_RS05120 PF01578 Cytochrome C assembly protein UGYR_RS05120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal UGYR_RS05125 PF03100 CcmE UGYR_RS05130 PF04995 Heme exporter protein D (CcmD) UGYR_RS05135 PF01578 Cytochrome C assembly protein UGYR_RS05140 PF03379 CcmB protein UGYR_RS05145 PF00005 ABC transporter UGYR_RS05160 PF03831 PhnA domain UGYR_RS05160 PF08274 PhnA Zinc-Ribbon UGYR_RS05165 PF13406 Transglycosylase SLT domain UGYR_RS05175 PF01292 Prokaryotic cytochrome b561 UGYR_RS05180 PF00155 Aminotransferase class I and II UGYR_RS05185 PF07350 Protein of unknown function (DUF1479) UGYR_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS05190 PF07694 5TMR of 5TMR-LYT UGYR_RS05190 PF06580 Histidine kinase UGYR_RS05195 PF04397 LytTr DNA-binding domain UGYR_RS05195 PF00072 Response regulator receiver domain UGYR_RS05200 PF07690 Major Facilitator Superfamily UGYR_RS05205 PF02685 Glucokinase UGYR_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS05215 PF03466 LysR substrate binding domain UGYR_RS05225 PF01566 Natural resistance-associated macrophage protein UGYR_RS05230 PF01773 Na+ dependent nucleoside transporter N-terminus UGYR_RS05230 PF07662 Na+ dependent nucleoside transporter C-terminus UGYR_RS05230 PF07670 Nucleoside recognition UGYR_RS05265 PF00749 tRNA synthetases class I (E and Q), catalytic domain UGYR_RS05295 PF12843 Putative quorum-sensing-regulated virulence factor UGYR_RS05300 PF03120 NAD-dependent DNA ligase OB-fold domain UGYR_RS05300 PF01653 NAD-dependent DNA ligase adenylation domain UGYR_RS05300 PF00533 BRCA1 C Terminus (BRCT) domain UGYR_RS05300 PF12826 Helix-hairpin-helix motif UGYR_RS05300 PF03119 NAD-dependent DNA ligase C4 zinc finger domain UGYR_RS05305 PF04354 ZipA, C-terminal FtsZ-binding domain UGYR_RS05315 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS05320 PF00381 PTS HPr component phosphorylation site UGYR_RS05325 PF00391 PEP-utilising enzyme, mobile domain UGYR_RS05325 PF05524 PEP-utilising enzyme, N-terminal UGYR_RS05325 PF02896 PEP-utilising enzyme, TIM barrel domain UGYR_RS05330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UGYR_RS05335 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS05340 PF00005 ABC transporter UGYR_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS05350 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS05360 PF07690 Major Facilitator Superfamily UGYR_RS05365 PF01380 SIS domain UGYR_RS05365 PF01418 Helix-turn-helix domain, rpiR family UGYR_RS05370 PF04074 YhcH/YjgK/YiaL UGYR_RS05375 PF00480 ROK family UGYR_RS05380 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase UGYR_RS05385 PF00701 Dihydrodipicolinate synthetase family UGYR_RS05390 PF04261 Dyp-type peroxidase family UGYR_RS05395 PF06572 Protein of unknown function (DUF1131) UGYR_RS05400 PF04076 Bacterial OB fold (BOF) protein UGYR_RS05405 PF00583 Acetyltransferase (GNAT) family UGYR_RS05410 PF01218 Coproporphyrinogen III oxidase UGYR_RS05415 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 UGYR_RS05420 PF00390 Malic enzyme, N-terminal domain UGYR_RS05420 PF01515 Phosphate acetyl/butaryl transferase UGYR_RS05420 PF03949 Malic enzyme, NAD binding domain UGYR_RS05425 PF00293 NUDIX domain UGYR_RS05430 PF03264 NapC/NirT cytochrome c family, N-terminal region UGYR_RS05435 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) UGYR_RS05440 PF01568 Molydopterin dinucleotide binding domain UGYR_RS05440 PF00384 Molybdopterin oxidoreductase UGYR_RS05440 PF10518 TAT (twin-arginine translocation) pathway signal sequence UGYR_RS05440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UGYR_RS05445 PF03927 NapD protein UGYR_RS05450 PF13187 4Fe-4S dicluster domain UGYR_RS05450 PF12800 4Fe-4S binding domain UGYR_RS05450 PF00037 4Fe-4S binding domain UGYR_RS05460 PF00072 Response regulator receiver domain UGYR_RS05460 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS05470 PF00873 AcrB/AcrD/AcrF family UGYR_RS05480 PF01817 Chorismate mutase type II UGYR_RS05485 PF03960 ArsC family UGYR_RS05490 PF01546 Peptidase family M20/M25/M40 UGYR_RS05490 PF07687 Peptidase dimerisation domain UGYR_RS05495 PF02557 D-alanyl-D-alanine carboxypeptidase UGYR_RS05500 PF13980 Uncharacterised protein family (UPF0370) UGYR_RS05505 PF02230 Phospholipase/Carboxylesterase UGYR_RS05510 PF08351 Domain of unknown function (DUF1726) UGYR_RS05510 PF13718 GNAT acetyltransferase 2 UGYR_RS05510 PF05127 Helicase UGYR_RS05510 PF17176 tRNA-binding domain UGYR_RS05515 PF04284 Protein of unknown function (DUF441) UGYR_RS05520 PF01259 SAICAR synthetase UGYR_RS05525 PF06804 NlpB/DapX lipoprotein UGYR_RS05530 PF00701 Dihydrodipicolinate synthetase family UGYR_RS05535 PF01842 ACT domain UGYR_RS05540 PF00578 AhpC/TSA family UGYR_RS05545 PF01594 AI-2E family transporter UGYR_RS05550 PF07720 Tetratricopeptide repeat UGYR_RS05550 PF01435 Peptidase family M48 UGYR_RS05555 PF03960 ArsC family UGYR_RS05560 PF00308 Bacterial dnaA protein UGYR_RS05565 PF00860 Permease family UGYR_RS05575 PF00586 AIR synthase related protein, N-terminal domain UGYR_RS05575 PF02769 AIR synthase related protein, C-terminal domain UGYR_RS05580 PF00551 Formyl transferase UGYR_RS05585 PF13302 Acetyltransferase (GNAT) domain UGYR_RS05590 PF00005 ABC transporter UGYR_RS05595 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS05600 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS05610 PF13090 Polyphosphate kinase C-terminal domain 2 UGYR_RS05610 PF13089 Polyphosphate kinase N-terminal domain UGYR_RS05610 PF17941 Polyphosphate kinase C-terminal domain 1 UGYR_RS05610 PF02503 Polyphosphate kinase middle domain UGYR_RS05615 PF02541 Ppx/GppA phosphatase family UGYR_RS05625 PF03448 MgtE intracellular N domain UGYR_RS05625 PF01769 Divalent cation transporter UGYR_RS05625 PF00571 CBS domain UGYR_RS05630 PF00012 Hsp70 protein UGYR_RS05640 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS05640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS05645 PF13953 PapC C-terminal domain UGYR_RS05645 PF00577 Outer membrane usher protein UGYR_RS05645 PF13954 PapC N-terminal domain UGYR_RS05660 PF13533 Biotin-lipoyl like UGYR_RS05665 PF00873 AcrB/AcrD/AcrF family UGYR_RS05670 PF00873 AcrB/AcrD/AcrF family UGYR_RS05675 PF07690 Major Facilitator Superfamily UGYR_RS05680 PF00672 HAMP domain UGYR_RS05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS05680 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS05685 PF00072 Response regulator receiver domain UGYR_RS05685 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS05690 PF07411 Domain of unknown function (DUF1508) UGYR_RS05695 PF01136 Peptidase family U32 UGYR_RS05695 PF16325 Peptidase family U32 C-terminal domain UGYR_RS05700 PF00781 Diacylglycerol kinase catalytic domain UGYR_RS05715 PF08543 Phosphomethylpyrimidine kinase UGYR_RS05775 PF01527 Transposase UGYR_RS05785 PF00239 Resolvase, N terminal domain UGYR_RS05785 PF02796 Helix-turn-helix domain of resolvase UGYR_RS05800 PF02540 NAD synthase UGYR_RS05800 PF00958 GMP synthase C terminal domain UGYR_RS05800 PF00117 Glutamine amidotransferase class-I UGYR_RS05805 PF00478 IMP dehydrogenase / GMP reductase domain UGYR_RS05805 PF00571 CBS domain UGYR_RS05810 PF02601 Exonuclease VII, large subunit UGYR_RS05810 PF13742 OB-fold nucleic acid binding domain UGYR_RS05815 PF01926 50S ribosome-binding GTPase UGYR_RS05815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UGYR_RS05820 PF13360 PQQ-like domain UGYR_RS05825 PF09976 Tetratricopeptide repeat-like domain UGYR_RS05830 PF03129 Anticodon binding domain UGYR_RS05830 PF13393 Histidyl-tRNA synthetase UGYR_RS05835 PF04551 GcpE protein UGYR_RS05840 PF13464 Domain of unknown function (DUF4115) UGYR_RS05850 PF04055 Radical SAM superfamily UGYR_RS05855 PF00334 Nucleoside diphosphate kinase UGYR_RS05865 PF00905 Penicillin binding protein transpeptidase domain UGYR_RS05865 PF06832 Penicillin-Binding Protein C-terminus Family UGYR_RS05865 PF00912 Transglycosylase UGYR_RS05870 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain UGYR_RS05870 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain UGYR_RS05870 PF00207 Alpha-2-macroglobulin family UGYR_RS05870 PF11974 Bacterial alpha-2-macroglobulin MG3 domain UGYR_RS05870 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain UGYR_RS05870 PF07678 A-macroglobulin TED domain UGYR_RS05870 PF01835 MG2 domain UGYR_RS05870 PF17962 Bacterial macroglobulin domain 6 UGYR_RS05870 PF07703 Alpha-2-macroglobulin bait region domain UGYR_RS05875 PF07179 SseB protein N-terminal domain UGYR_RS05875 PF14581 SseB protein C-terminal domain UGYR_RS05880 PF12404 Peptidase UGYR_RS05880 PF00883 Cytosol aminopeptidase family, catalytic domain UGYR_RS05885 PF04384 Iron-sulphur cluster assembly UGYR_RS05890 PF00111 2Fe-2S iron-sulfur cluster binding domain UGYR_RS05895 PF00012 Hsp70 protein UGYR_RS05900 PF07743 HSCB C-terminal oligomerisation domain UGYR_RS05900 PF00226 DnaJ domain UGYR_RS05905 PF01521 Iron-sulphur cluster biosynthesis UGYR_RS05910 PF01592 NifU-like N terminal domain UGYR_RS05915 PF00266 Aminotransferase class-V UGYR_RS05920 PF02082 Transcriptional regulator UGYR_RS05925 PF00588 SpoU rRNA Methylase family UGYR_RS05930 PF00459 Inositol monophosphatase family UGYR_RS05935 PF03824 High-affinity nickel-transport protein UGYR_RS05940 PF06226 Protein of unknown function (DUF1007) UGYR_RS05945 PF00874 PRD domain UGYR_RS05950 PF12832 MFS_1 like family UGYR_RS05955 PF00464 Serine hydroxymethyltransferase UGYR_RS05960 PF00970 Oxidoreductase FAD-binding domain UGYR_RS05960 PF00175 Oxidoreductase NAD-binding domain UGYR_RS05960 PF00042 Globin UGYR_RS05965 PF14503 YhfZ C-terminal domain UGYR_RS05965 PF14502 Helix-turn-helix domain UGYR_RS05975 PF01168 Alanine racemase, N-terminal domain UGYR_RS05980 PF02126 Phosphotriesterase family UGYR_RS05985 PF10941 Protein of unknown function DUF2620 UGYR_RS05990 PF10797 Protein of unknown function UGYR_RS05995 PF00543 Nitrogen regulatory protein P-II UGYR_RS06000 PF00795 Carbon-nitrogen hydrolase UGYR_RS06000 PF02540 NAD synthase UGYR_RS06005 PF00072 Response regulator receiver domain UGYR_RS06005 PF00158 Sigma-54 interaction domain UGYR_RS06010 PF13942 YfhG lipoprotein UGYR_RS06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS06015 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS06030 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal UGYR_RS06030 PF02769 AIR synthase related protein, C-terminal domain UGYR_RS06030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UGYR_RS06035 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS06035 PF01464 Transglycosylase SLT domain UGYR_RS06040 PF14437 MafB19-like deaminase UGYR_RS06050 PF00367 phosphotransferase system, EIIB UGYR_RS06050 PF02378 Phosphotransferase system, EIIC UGYR_RS06055 PF01380 SIS domain UGYR_RS06060 PF01380 SIS domain UGYR_RS06060 PF01418 Helix-turn-helix domain, rpiR family UGYR_RS06065 PF12838 4Fe-4S dicluster domain UGYR_RS06070 PF01648 4'-phosphopantetheinyl transferase superfamily UGYR_RS06075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ UGYR_RS06080 PF11967 Recombination protein O N terminal UGYR_RS06080 PF02565 Recombination protein O C terminal UGYR_RS06085 PF01926 50S ribosome-binding GTPase UGYR_RS06085 PF07650 KH domain UGYR_RS06090 PF00035 Double-stranded RNA binding motif UGYR_RS06090 PF14622 Ribonuclease-III-like UGYR_RS06095 PF10502 Signal peptidase, peptidase S26 UGYR_RS06100 PF06421 GTP-binding protein LepA C-terminus UGYR_RS06100 PF03144 Elongation factor Tu domain 2 UGYR_RS06100 PF00679 Elongation factor G C-terminus UGYR_RS06100 PF00009 Elongation factor Tu GTP binding domain UGYR_RS06110 PF17188 MucB/RseB C-terminal domain UGYR_RS06110 PF03888 MucB/RseB N-terminal domain UGYR_RS06115 PF03872 Anti sigma-E protein RseA, N-terminal domain UGYR_RS06115 PF03873 Anti sigma-E protein RseA, C-terminal domain UGYR_RS06120 PF08281 Sigma-70, region 4 UGYR_RS06120 PF04542 Sigma-70 region 2 UGYR_RS06125 PF02910 Fumarate reductase flavoprotein C-term UGYR_RS06125 PF00890 FAD binding domain UGYR_RS06130 PF05175 Methyltransferase small domain UGYR_RS06135 PF00270 DEAD/DEAH box helicase UGYR_RS06135 PF00271 Helicase conserved C-terminal domain UGYR_RS06140 PF12796 Ankyrin repeats (3 copies) UGYR_RS06150 PF01228 Glycine radical UGYR_RS06155 PF03167 Uracil DNA glycosylase superfamily UGYR_RS06160 PF01025 GrpE UGYR_RS06165 PF01513 ATP-NAD kinase UGYR_RS06170 PF02463 RecF/RecN/SMC N terminal domain UGYR_RS06175 PF04355 SmpA / OmlA family UGYR_RS06180 PF03658 RnfH family Ubiquitin UGYR_RS06185 PF03364 Polyketide cyclase / dehydrase and lipid transport UGYR_RS06190 PF01668 SmpB protein UGYR_RS06195 PF13356 Arm DNA-binding domain UGYR_RS06195 PF00589 Phage integrase family UGYR_RS06200 PF00665 Integrase core domain UGYR_RS06200 PF13276 HTH-like domain UGYR_RS06200 PF13333 Integrase core domain UGYR_RS06205 PF01527 Transposase UGYR_RS06225 PF06114 IrrE N-terminal-like domain UGYR_RS06235 PF01926 50S ribosome-binding GTPase UGYR_RS06240 PF08220 DeoR-like helix-turn-helix domain UGYR_RS06240 PF13280 WYL domain UGYR_RS06245 PF01527 Transposase UGYR_RS06255 PF00271 Helicase conserved C-terminal domain UGYR_RS06265 PF00589 Phage integrase family UGYR_RS06265 PF13356 Arm DNA-binding domain UGYR_RS06270 PF13276 HTH-like domain UGYR_RS06270 PF00665 Integrase core domain UGYR_RS06270 PF13333 Integrase core domain UGYR_RS06280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS06280 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS06285 PF13954 PapC N-terminal domain UGYR_RS06285 PF00577 Outer membrane usher protein UGYR_RS06285 PF13953 PapC C-terminal domain UGYR_RS06300 PF03466 LysR substrate binding domain UGYR_RS06300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS06315 PF18413 Neuraminidase-like domain UGYR_RS06315 PF18413 Neuraminidase-like domain UGYR_RS06315 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain UGYR_RS06315 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain UGYR_RS06325 PF12255 Insecticide toxin TcdB middle/C-terminal region UGYR_RS06325 PF03534 Salmonella virulence plasmid 65kDa B protein UGYR_RS06325 PF12256 Insecticide toxin TcdB middle/N-terminal region UGYR_RS06330 PF18807 Tripartite Tc toxins repeat UGYR_RS06330 PF14431 YwqJ-like deaminase UGYR_RS06340 PF01527 Transposase UGYR_RS06345 PF00571 CBS domain UGYR_RS06345 PF01380 SIS domain UGYR_RS06350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UGYR_RS06350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UGYR_RS06360 PF02653 Branched-chain amino acid transport system / permease component UGYR_RS06365 PF00005 ABC transporter UGYR_RS06375 PF00561 alpha/beta hydrolase fold UGYR_RS06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS06380 PF03466 LysR substrate binding domain UGYR_RS06385 PF02652 L-lactate permease UGYR_RS06390 PF01070 FMN-dependent dehydrogenase UGYR_RS06395 PF06039 Malate:quinone oxidoreductase (Mqo) UGYR_RS06400 PF00313 'Cold-shock' DNA-binding domain UGYR_RS06410 PF06711 Protein of unknown function (DUF1198) UGYR_RS06415 PF09400 Protein of unknown function (DUF2002) UGYR_RS06430 PF07972 NrdI Flavodoxin like UGYR_RS06435 PF08343 Ribonucleotide reductase N-terminal UGYR_RS06435 PF00317 Ribonucleotide reductase, all-alpha domain UGYR_RS06435 PF02867 Ribonucleotide reductase, barrel domain UGYR_RS06440 PF00268 Ribonucleotide reductase, small chain UGYR_RS06445 PF00005 ABC transporter UGYR_RS06445 PF00571 CBS domain UGYR_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS06455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UGYR_RS06465 PF07690 Major Facilitator Superfamily UGYR_RS06470 PF01047 MarR family UGYR_RS06480 PF00529 HlyD membrane-fusion protein of T1SS UGYR_RS06480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UGYR_RS06485 PF07690 Major Facilitator Superfamily UGYR_RS06490 PF08032 RNA 2'-O ribose methyltransferase substrate binding UGYR_RS06490 PF00588 SpoU rRNA Methylase family UGYR_RS06495 PF00085 Thioredoxin UGYR_RS06500 PF03942 DTW domain UGYR_RS06505 PF13607 Succinyl-CoA ligase like flavodoxin domain UGYR_RS06505 PF00583 Acetyltransferase (GNAT) family UGYR_RS06505 PF13380 CoA binding domain UGYR_RS06510 PF13091 PLD-like domain UGYR_RS06515 PF10043 Predicted periplasmic lipoprotein (DUF2279) UGYR_RS06545 PF00005 ABC transporter UGYR_RS06545 PF09383 NIL domain UGYR_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS06555 PF03180 NLPA lipoprotein UGYR_RS06560 PF16358 RcsF lipoprotein UGYR_RS06565 PF01980 tRNA-methyltransferase O UGYR_RS06565 PF18389 TrmO C-terminal domain UGYR_RS06570 PF03129 Anticodon binding domain UGYR_RS06570 PF04073 Aminoacyl-tRNA editing domain UGYR_RS06570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UGYR_RS06575 PF04170 NlpE N-terminal domain UGYR_RS06575 PF17185 NlpE C-terminal OB domain UGYR_RS06580 PF00472 RF-1 domain UGYR_RS06585 PF07152 YaeQ protein UGYR_RS06590 PF06786 Uncharacterised protein family (UPF0253) UGYR_RS06595 PF07073 Modulator of Rho-dependent transcription termination (ROF) UGYR_RS06600 PF00034 Cytochrome c UGYR_RS06605 PF09179 TilS substrate binding domain UGYR_RS06605 PF11734 TilS substrate C-terminal domain UGYR_RS06605 PF01171 PP-loop family UGYR_RS06610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UGYR_RS06625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UGYR_RS06630 PF14579 Helix-hairpin-helix motif UGYR_RS06630 PF02811 PHP domain UGYR_RS06630 PF01336 OB-fold nucleic acid binding domain UGYR_RS06630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UGYR_RS06630 PF07733 Bacterial DNA polymerase III alpha NTPase domain UGYR_RS06635 PF01351 Ribonuclease HII UGYR_RS06640 PF02684 Lipid-A-disaccharide synthetase UGYR_RS06645 PF00132 Bacterial transferase hexapeptide (six repeats) UGYR_RS06645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 UGYR_RS06650 PF07977 FabA-like domain UGYR_RS06655 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD UGYR_RS06655 PF00132 Bacterial transferase hexapeptide (six repeats) UGYR_RS06660 PF03938 Outer membrane protein (OmpH-like) UGYR_RS06665 PF01103 Surface antigen UGYR_RS06665 PF07244 Surface antigen variable number repeat UGYR_RS06670 PF02163 Peptidase family M50 UGYR_RS06670 PF17820 PDZ domain UGYR_RS06680 PF01255 Putative undecaprenyl diphosphate synthase UGYR_RS06685 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UGYR_RS06685 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UGYR_RS06685 PF13288 DXP reductoisomerase C-terminal domain UGYR_RS06690 PF01765 Ribosome recycling factor UGYR_RS06695 PF00696 Amino acid kinase family UGYR_RS06700 PF00889 Elongation factor TS UGYR_RS06705 PF00318 Ribosomal protein S2 UGYR_RS06710 PF00557 Metallopeptidase family M24 UGYR_RS06715 PF08335 GlnD PII-uridylyltransferase UGYR_RS06715 PF01966 HD domain UGYR_RS06715 PF01909 Nucleotidyltransferase domain UGYR_RS06715 PF01842 ACT domain UGYR_RS06720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal UGYR_RS06720 PF00132 Bacterial transferase hexapeptide (six repeats) UGYR_RS06720 PF14602 Hexapeptide repeat of succinyl-transferase UGYR_RS06725 PF11944 Protein of unknown function (DUF3461) UGYR_RS06730 PF00258 Flavodoxin UGYR_RS06735 PF00849 RNA pseudouridylate synthase UGYR_RS06740 PF04287 tRNA pseudouridine synthase C UGYR_RS06745 PF07348 Syd protein (SUKH-2) UGYR_RS06750 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term UGYR_RS06750 PF14489 QueF-like protein UGYR_RS06755 PF03641 Possible lysine decarboxylase UGYR_RS06755 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases UGYR_RS06755 PF11892 Domain of unknown function (DUF3412) UGYR_RS06760 PF01367 5'-3' exonuclease, C-terminal SAM fold UGYR_RS06760 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UGYR_RS06765 PF18125 RlmM ferredoxin-like domain UGYR_RS06765 PF01728 FtsJ-like methyltransferase UGYR_RS06770 PF04241 Protein of unknown function (DUF423) UGYR_RS06775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS06775 PF03466 LysR substrate binding domain UGYR_RS06780 PF06004 Bacterial protein of unknown function (DUF903) UGYR_RS06785 PF00266 Aminotransferase class-V UGYR_RS06790 PF02657 Fe-S metabolism associated domain UGYR_RS06795 PF00899 ThiF family UGYR_RS06800 PF06725 3D domain UGYR_RS06800 PF03562 MltA specific insert domain UGYR_RS06820 PF01520 N-acetylmuramoyl-L-alanine amidase UGYR_RS06820 PF11741 AMIN domain UGYR_RS06825 PF00696 Amino acid kinase family UGYR_RS06825 PF00583 Acetyltransferase (GNAT) family UGYR_RS06830 PF13538 UvrD-like helicase C-terminal domain UGYR_RS06835 PF13361 UvrD-like helicase C-terminal domain UGYR_RS06835 PF12705 PD-(D/E)XK nuclease superfamily UGYR_RS06835 PF00580 UvrD/REP helicase N-terminal domain UGYR_RS06840 PF05193 Peptidase M16 inactive domain UGYR_RS06840 PF00675 Insulinase (Peptidase family M16) UGYR_RS06840 PF16187 Middle or third domain of peptidase_M16 UGYR_RS06845 PF17946 RecC C-terminal domain UGYR_RS06850 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS06850 PF12528 Type II secretion prepilin peptidase dependent protein C UGYR_RS06865 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS06865 PF00114 Pilin (bacterial filament) UGYR_RS06875 PF00303 Thymidylate synthase UGYR_RS06880 PF01790 Prolipoprotein diacylglyceryl transferase UGYR_RS06885 PF01590 GAF domain UGYR_RS06885 PF05524 PEP-utilising enzyme, N-terminal UGYR_RS06885 PF02896 PEP-utilising enzyme, TIM barrel domain UGYR_RS06885 PF00391 PEP-utilising enzyme, mobile domain UGYR_RS06890 PF00293 NUDIX domain UGYR_RS06895 PF02976 DNA mismatch repair enzyme MutH UGYR_RS06900 PF03741 Integral membrane protein TerC family UGYR_RS06905 PF00248 Aldo/keto reductase family UGYR_RS06910 PF07690 Major Facilitator Superfamily UGYR_RS06915 PF01553 Acyltransferase UGYR_RS06915 PF00501 AMP-binding enzyme UGYR_RS06915 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS06920 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS06925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UGYR_RS06925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UGYR_RS06930 PF03466 LysR substrate binding domain UGYR_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS06935 PF03466 LysR substrate binding domain UGYR_RS06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS06975 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS06975 PF11612 Type II secretion system (T2SS), protein J UGYR_RS06980 PF02501 Type II secretion system (T2SS), protein I UGYR_RS06980 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS06990 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS06990 PF08334 Type II secretion system (T2SS), protein G UGYR_RS06995 PF00482 Type II secretion system (T2SS), protein F UGYR_RS07000 PF00437 Type II/IV secretion system protein UGYR_RS07005 PF03958 Bacterial type II/III secretion system short domain UGYR_RS07005 PF00263 Bacterial type II and III secretion system protein UGYR_RS07030 PF00005 ABC transporter UGYR_RS07035 PF02405 Permease MlaE UGYR_RS07045 PF01336 OB-fold nucleic acid binding domain UGYR_RS07045 PF00152 tRNA synthetases class II (D, K and N) UGYR_RS07050 PF00472 RF-1 domain UGYR_RS07050 PF03462 PCRF domain UGYR_RS07055 PF01368 DHH family UGYR_RS07055 PF02272 DHHA1 domain UGYR_RS07055 PF17768 RecJ OB domain UGYR_RS07060 PF10411 Disulfide bond isomerase protein N-terminus UGYR_RS07060 PF13098 Thioredoxin-like domain UGYR_RS07065 PF02899 Phage integrase, N-terminal SAM-like domain UGYR_RS07065 PF00589 Phage integrase family UGYR_RS07070 PF00258 Flavodoxin UGYR_RS07075 PF07254 Membrane-bound toxin component of toxin-antitoxin system UGYR_RS07080 PF03937 Flavinator of succinate dehydrogenase UGYR_RS07085 PF01571 Aminomethyltransferase folate-binding domain UGYR_RS07090 PF03006 Haemolysin-III related UGYR_RS07095 PF02347 Glycine cleavage system P-protein UGYR_RS07100 PF01597 Glycine cleavage H-protein UGYR_RS07105 PF08669 Glycine cleavage T-protein C-terminal barrel domain UGYR_RS07105 PF01571 Aminomethyltransferase folate-binding domain UGYR_RS07110 PF01494 FAD binding domain UGYR_RS07115 PF01494 FAD binding domain UGYR_RS07120 PF00557 Metallopeptidase family M24 UGYR_RS07120 PF05195 Aminopeptidase P, N-terminal domain UGYR_RS07125 PF03695 Uncharacterised protein family (UPF0149) UGYR_RS07130 PF05164 Cell division protein ZapA UGYR_RS07135 PF01812 5-formyltetrahydrofolate cyclo-ligase family UGYR_RS07140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UGYR_RS07140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UGYR_RS07140 PF01842 ACT domain UGYR_RS07145 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) UGYR_RS07150 PF03466 LysR substrate binding domain UGYR_RS07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS07155 PF04402 Protein of unknown function (DUF541) UGYR_RS07160 PF01810 LysE type translocator UGYR_RS07165 PF00924 Mechanosensitive ion channel UGYR_RS07165 PF05552 Conserved TM helix UGYR_RS07170 PF01116 Fructose-bisphosphate aldolase class-II UGYR_RS07175 PF00162 Phosphoglycerate kinase UGYR_RS07180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UGYR_RS07180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UGYR_RS07185 PF02779 Transketolase, pyrimidine binding domain UGYR_RS07185 PF00456 Transketolase, thiamine diphosphate binding domain UGYR_RS07185 PF02780 Transketolase, C-terminal domain UGYR_RS07195 PF17810 Arginine decarboxylase helical bundle domain UGYR_RS07195 PF17944 Arginine decarboxylase C-terminal helical extension UGYR_RS07195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UGYR_RS07200 PF02773 S-adenosylmethionine synthetase, C-terminal domain UGYR_RS07200 PF02772 S-adenosylmethionine synthetase, central domain UGYR_RS07200 PF00438 S-adenosylmethionine synthetase, N-terminal domain UGYR_RS07210 PF04143 Sulphur transport UGYR_RS07220 PF17283 SprT-like zinc ribbon domain UGYR_RS07220 PF10263 SprT-like family UGYR_RS07225 PF04231 Endonuclease I UGYR_RS07230 PF04452 RNA methyltransferase UGYR_RS07235 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain UGYR_RS07235 PF02951 Prokaryotic glutathione synthetase, N-terminal domain UGYR_RS07240 PF02622 Uncharacterized ACR, COG1678 UGYR_RS07245 PF03652 Holliday junction resolvase UGYR_RS07250 PF00795 Carbon-nitrogen hydrolase UGYR_RS07255 PF04371 Porphyromonas-type peptidyl-arginine deiminase UGYR_RS07260 PF00437 Type II/IV secretion system protein UGYR_RS07265 PF01168 Alanine racemase, N-terminal domain UGYR_RS07270 PF14748 Pyrroline-5-carboxylate reductase dimerisation UGYR_RS07270 PF03807 NADP oxidoreductase coenzyme F420-dependent UGYR_RS07275 PF02325 YGGT family UGYR_RS07280 PF02594 Uncharacterised ACR, YggU family COG1872 UGYR_RS07285 PF01725 Ham1 family UGYR_RS07290 PF04055 Radical SAM superfamily UGYR_RS07290 PF06969 HemN C-terminal domain UGYR_RS07295 PF11101 Protein of unknown function (DUF2884) UGYR_RS07300 PF04960 Glutaminase UGYR_RS07305 PF04320 Protein with unknown function (DUF469) UGYR_RS07310 PF02390 Putative methyltransferase UGYR_RS07315 PF10576 Iron-sulfur binding domain of endonuclease III UGYR_RS07315 PF00633 Helix-hairpin-helix motif UGYR_RS07315 PF00730 HhH-GPD superfamily base excision DNA repair protein UGYR_RS07315 PF14815 NUDIX domain UGYR_RS07320 PF04362 Bacterial Fe(2+) trafficking UGYR_RS07325 PF01464 Transglycosylase SLT domain UGYR_RS07325 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain UGYR_RS07340 PF16456 YmgD protein UGYR_RS07350 PF03608 PTS system enzyme II sorbitol-specific factor UGYR_RS07355 PF07663 Sorbitol phosphotransferase enzyme II C-terminus UGYR_RS07355 PF03612 Sorbitol phosphotransferase enzyme II N-terminus UGYR_RS07360 PF03829 PTS system glucitol/sorbitol-specific IIA component UGYR_RS07365 PF00106 short chain dehydrogenase UGYR_RS07370 PF06923 Glucitol operon activator protein (GutM) UGYR_RS07375 PF00455 DeoR C terminal sensor domain UGYR_RS07375 PF08220 DeoR-like helix-turn-helix domain UGYR_RS07380 PF00571 CBS domain UGYR_RS07380 PF01380 SIS domain UGYR_RS07385 PF00294 pfkB family carbohydrate kinase UGYR_RS07390 PF01228 Glycine radical UGYR_RS07390 PF02901 Pyruvate formate lyase-like UGYR_RS07395 PF00871 Acetokinase family UGYR_RS07400 PF01490 Transmembrane amino acid transporter protein UGYR_RS07405 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS07410 PF00668 Condensation domain UGYR_RS07410 PF00550 Phosphopantetheine attachment site UGYR_RS07410 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS07410 PF00501 AMP-binding enzyme UGYR_RS07410 PF00975 Thioesterase domain UGYR_RS07420 PF00857 Isochorismatase family UGYR_RS07420 PF00550 Phosphopantetheine attachment site UGYR_RS07425 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS07425 PF00501 AMP-binding enzyme UGYR_RS07430 PF00425 chorismate binding enzyme UGYR_RS07435 PF01497 Periplasmic binding protein UGYR_RS07440 PF05977 Transmembrane secretion effector UGYR_RS07445 PF01032 FecCD transport family UGYR_RS07450 PF01032 FecCD transport family UGYR_RS07455 PF00005 ABC transporter UGYR_RS07465 PF00501 AMP-binding enzyme UGYR_RS07465 PF00668 Condensation domain UGYR_RS07465 PF00550 Phosphopantetheine attachment site UGYR_RS07465 PF00975 Thioesterase domain UGYR_RS07465 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS07470 PF03621 MbtH-like protein UGYR_RS07475 PF11806 Domain of unknown function (DUF3327) UGYR_RS07475 PF00756 Putative esterase UGYR_RS07480 PF00593 TonB dependent receptor UGYR_RS07480 PF07715 TonB-dependent Receptor Plug Domain UGYR_RS07485 PF08501 Shikimate dehydrogenase substrate binding domain UGYR_RS07510 PF13629 Pilus formation protein N terminal region UGYR_RS07510 PF00263 Bacterial type II and III secretion system protein UGYR_RS07510 PF04972 BON domain UGYR_RS07525 PF00437 Type II/IV secretion system protein UGYR_RS07560 PF02472 Biopolymer transport protein ExbD/TolR UGYR_RS07565 PF01618 MotA/TolQ/ExbB proton channel family UGYR_RS07570 PF01053 Cys/Met metabolism PLP-dependent enzyme UGYR_RS07575 PF09335 SNARE associated Golgi protein UGYR_RS07580 PF12833 Helix-turn-helix domain UGYR_RS07580 PF06719 AraC-type transcriptional regulator N-terminus UGYR_RS07585 PF00465 Iron-containing alcohol dehydrogenase UGYR_RS07590 PF00248 Aldo/keto reductase family UGYR_RS07595 PF08497 Radical SAM N-terminal UGYR_RS07595 PF11842 Domain of unknown function (DUF3362) UGYR_RS07595 PF04055 Radical SAM superfamily UGYR_RS07600 PF07731 Multicopper oxidase UGYR_RS07600 PF07732 Multicopper oxidase UGYR_RS07605 PF01553 Acyltransferase UGYR_RS07610 PF03989 DNA gyrase C-terminal domain, beta-propeller UGYR_RS07610 PF00521 DNA gyrase/topoisomerase IV, subunit A UGYR_RS07615 PF02525 Flavodoxin-like fold UGYR_RS07620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS07620 PF03466 LysR substrate binding domain UGYR_RS07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS07625 PF00986 DNA gyrase B subunit, carboxyl terminus UGYR_RS07625 PF00204 DNA gyrase B UGYR_RS07625 PF01751 Toprim domain UGYR_RS07630 PF05728 Uncharacterised protein family (UPF0227) UGYR_RS07640 PF06853 Protein of unknown function (DUF1249) UGYR_RS07645 PF00293 NUDIX domain UGYR_RS07650 PF02321 Outer membrane efflux protein UGYR_RS07655 PF06693 Protein of unknown function (DUF1190) UGYR_RS07660 PF03738 Glutathionylspermidine synthase preATP-grasp UGYR_RS07665 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase UGYR_RS07670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UGYR_RS07675 PF04380 Membrane fusogenic activity UGYR_RS07680 PF01467 Cytidylyltransferase-like UGYR_RS07680 PF00294 pfkB family carbohydrate kinase UGYR_RS07685 PF08335 GlnD PII-uridylyltransferase UGYR_RS07685 PF03710 Glutamate-ammonia ligase adenylyltransferase UGYR_RS07690 PF01928 CYTH domain UGYR_RS07695 PF08239 Bacterial SH3 domain UGYR_RS07700 PF01743 Poly A polymerase head domain UGYR_RS07700 PF12627 Probable RNA and SrmB- binding site of polymerase A UGYR_RS07700 PF01966 HD domain UGYR_RS07705 PF02673 Bacitracin resistance protein BacA UGYR_RS07710 PF02152 Dihydroneopterin aldolase UGYR_RS07715 PF02660 Glycerol-3-phosphate acyltransferase UGYR_RS07720 PF00814 Glycoprotease family UGYR_RS07725 PF01165 Ribosomal protein S21 UGYR_RS07730 PF01807 CHC2 zinc finger UGYR_RS07730 PF08275 DNA primase catalytic core, N-terminal domain UGYR_RS07730 PF10410 DnaB-helicase binding domain of primase UGYR_RS07730 PF08278 DNA primase DnaG DnaB-binding UGYR_RS07735 PF00140 Sigma-70 factor, region 1.2 UGYR_RS07735 PF04546 Sigma-70, non-essential region UGYR_RS07735 PF04542 Sigma-70 region 2 UGYR_RS07735 PF03979 Sigma-70 factor, region 1.1 UGYR_RS07735 PF04545 Sigma-70, region 4 UGYR_RS07735 PF04539 Sigma-70 region 3 UGYR_RS07755 PF00106 short chain dehydrogenase UGYR_RS07785 PF13332 Hemagglutinin repeat UGYR_RS07785 PF04829 Pre-toxin domain with VENN motif UGYR_RS07805 PF13332 Hemagglutinin repeat UGYR_RS07805 PF04829 Pre-toxin domain with VENN motif UGYR_RS07815 PF01527 Transposase UGYR_RS07825 PF13332 Hemagglutinin repeat UGYR_RS07825 PF05860 haemagglutination activity domain UGYR_RS07825 PF13018 Extended Signal Peptide of Type V secretion system UGYR_RS07825 PF04829 Pre-toxin domain with VENN motif UGYR_RS07830 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB UGYR_RS07830 PF08479 POTRA domain, ShlB-type UGYR_RS07830 PF17287 POTRA domain UGYR_RS07835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UGYR_RS07835 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS07840 PF05175 Methyltransferase small domain UGYR_RS07850 PF01863 Protein of unknown function DUF45 UGYR_RS07855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UGYR_RS07860 PF03741 Integral membrane protein TerC family UGYR_RS07865 PF00375 Sodium:dicarboxylate symporter family UGYR_RS07875 PF08666 SAF domain UGYR_RS07875 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus UGYR_RS07880 PF08125 Mannitol dehydrogenase C-terminal domain UGYR_RS07880 PF01232 Mannitol dehydrogenase Rossmann domain UGYR_RS07885 PF02614 Glucuronate isomerase UGYR_RS07890 PF07690 Major Facilitator Superfamily UGYR_RS07895 PF00392 Bacterial regulatory proteins, gntR family UGYR_RS07895 PF07729 FCD domain UGYR_RS07905 PF09335 SNARE associated Golgi protein UGYR_RS07910 PF13721 SecD export protein N-terminal TM region UGYR_RS07920 PF05957 Bacterial protein of unknown function (DUF883) UGYR_RS07925 PF07332 Putative Actinobacterial Holin-X, holin superfamily III UGYR_RS07930 PF13997 YqjK-like protein UGYR_RS07935 PF07681 DoxX UGYR_RS07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS07940 PF03466 LysR substrate binding domain UGYR_RS07945 PF17954 Quercetinase C-terminal cupin domain UGYR_RS07945 PF02678 Pirin UGYR_RS07950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UGYR_RS07955 PF04348 LppC putative lipoprotein UGYR_RS07960 PF02021 Uncharacterised protein family UPF0102 UGYR_RS07965 PF13580 SIS domain UGYR_RS07970 PF04972 BON domain UGYR_RS07975 PF00912 Transglycosylase UGYR_RS07985 PF18415 Histidine kinase receptor ArcB trans-membrane domain UGYR_RS07985 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS07985 PF01627 Hpt domain UGYR_RS07985 PF00989 PAS fold UGYR_RS07985 PF00072 Response regulator receiver domain UGYR_RS07985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS07990 PF04055 Radical SAM superfamily UGYR_RS07990 PF16199 Radical_SAM C-terminal domain UGYR_RS07995 PF00310 Glutamine amidotransferases class-II UGYR_RS07995 PF01493 GXGXG motif UGYR_RS07995 PF01645 Conserved region in glutamate synthase UGYR_RS07995 PF04898 Glutamate synthase central domain UGYR_RS08000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UGYR_RS08000 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS08010 PF04386 Stringent starvation protein B UGYR_RS08015 PF00043 Glutathione S-transferase, C-terminal domain UGYR_RS08015 PF02798 Glutathione S-transferase, N-terminal domain UGYR_RS08020 PF00380 Ribosomal protein S9/S16 UGYR_RS08025 PF00572 Ribosomal protein L13 UGYR_RS08030 PF03969 AFG1-like ATPase UGYR_RS08035 PF06295 Protein of unknown function (DUF1043) UGYR_RS08040 PF00595 PDZ domain UGYR_RS08040 PF13180 PDZ domain UGYR_RS08045 PF13180 PDZ domain UGYR_RS08050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UGYR_RS08055 PF01722 BolA-like protein UGYR_RS08060 PF13466 STAS domain UGYR_RS08065 PF05494 MlaC protein UGYR_RS08070 PF02470 MlaD protein UGYR_RS08075 PF02405 Permease MlaE UGYR_RS08080 PF00005 ABC transporter UGYR_RS08085 PF01699 Sodium/calcium exchanger protein UGYR_RS08090 PF00571 CBS domain UGYR_RS08090 PF01380 SIS domain UGYR_RS08100 PF06835 Lipopolysaccharide-assembly, LptC-related UGYR_RS08105 PF03968 OstA-like protein UGYR_RS08110 PF00005 ABC transporter UGYR_RS08110 PF12399 Branched-chain amino acid ATP-binding cassette transporter UGYR_RS08115 PF00309 Sigma-54 factor, Activator interacting domain (AID) UGYR_RS08115 PF04963 Sigma-54 factor, core binding domain UGYR_RS08115 PF04552 Sigma-54, DNA binding domain UGYR_RS08120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UGYR_RS08125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UGYR_RS08130 PF03668 P-loop ATPase protein family UGYR_RS08135 PF00381 PTS HPr component phosphorylation site UGYR_RS08140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UGYR_RS08140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UGYR_RS08145 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain UGYR_RS08145 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain UGYR_RS08150 PF01042 Endoribonuclease L-PSP UGYR_RS08155 PF00128 Alpha amylase, catalytic domain UGYR_RS08155 PF11941 Domain of unknown function (DUF3459) UGYR_RS08160 PF00367 phosphotransferase system, EIIB UGYR_RS08160 PF02378 Phosphotransferase system, EIIC UGYR_RS08165 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS08170 PF00689 Cation transporting ATPase, C-terminus UGYR_RS08170 PF00690 Cation transporter/ATPase, N-terminus UGYR_RS08185 PF14760 Rnk N-terminus UGYR_RS08185 PF01272 Transcription elongation factor, GreA/GreB, C-term UGYR_RS08190 PF07361 Cytochrome b562 UGYR_RS08195 PF01523 Putative modulator of DNA gyrase UGYR_RS08200 PF04751 Protein of unknown function (DUF615) UGYR_RS08205 PF01337 Barstar (barnase inhibitor) UGYR_RS08210 PF00545 ribonuclease UGYR_RS08215 PF00171 Aldehyde dehydrogenase family UGYR_RS08220 PF04632 Fusaric acid resistance protein family UGYR_RS08225 PF13533 Biotin-lipoyl like UGYR_RS08230 PF07869 Protein of unknown function (DUF1656) UGYR_RS08235 PF03466 LysR substrate binding domain UGYR_RS08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS08240 PF01523 Putative modulator of DNA gyrase UGYR_RS08245 PF00795 Carbon-nitrogen hydrolase UGYR_RS08250 PF13116 Protein of unknown function UGYR_RS08250 PF13502 AsmA-like C-terminal region UGYR_RS08255 PF10150 Ribonuclease E/G family UGYR_RS08255 PF00575 S1 RNA binding domain UGYR_RS08260 PF02545 Maf-like protein UGYR_RS08265 PF04093 rod shape-determining protein MreD UGYR_RS08270 PF04085 rod shape-determining protein MreC UGYR_RS08280 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS08280 PF00563 EAL domain UGYR_RS08280 PF17157 Gammaproteobacterial periplasmic sensor domain UGYR_RS08285 PF00107 Zinc-binding dehydrogenase UGYR_RS08285 PF08240 Alcohol dehydrogenase GroES-like domain UGYR_RS08290 PF00174 Oxidoreductase molybdopterin binding domain UGYR_RS08295 PF01794 Ferric reductase like transmembrane component UGYR_RS08300 PF01220 Dehydroquinase class II UGYR_RS08305 PF00364 Biotin-requiring enzyme UGYR_RS08310 PF02785 Biotin carboxylase C-terminal domain UGYR_RS08310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UGYR_RS08310 PF00289 Biotin carboxylase, N-terminal domain UGYR_RS08315 PF06196 Protein of unknown function (DUF997) UGYR_RS08320 PF00474 Sodium:solute symporter family UGYR_RS08330 PF01207 Dihydrouridine synthase (Dus) UGYR_RS08335 PF02954 Bacterial regulatory protein, Fis family UGYR_RS08345 PF03279 Bacterial lipid A biosynthesis acyltransferase UGYR_RS08350 PF00484 Carbonic anhydrase UGYR_RS08355 PF04172 LrgB-like family UGYR_RS08360 PF03788 LrgA family UGYR_RS08365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS08365 PF03466 LysR substrate binding domain UGYR_RS08370 PF00999 Sodium/hydrogen exchanger family UGYR_RS08375 PF00860 Permease family UGYR_RS08385 PF00436 Single-strand binding protein family UGYR_RS08390 PF17760 UvrA interaction domain UGYR_RS08390 PF00005 ABC transporter UGYR_RS08390 PF17755 UvrA DNA-binding domain UGYR_RS08395 PF04237 YjbR UGYR_RS08400 PF00155 Aminotransferase class I and II UGYR_RS08405 PF01168 Alanine racemase, N-terminal domain UGYR_RS08405 PF00842 Alanine racemase, C-terminal domain UGYR_RS08410 PF03796 DnaB-like helicase C terminal domain UGYR_RS08410 PF00772 DnaB-like helicase N terminal domain UGYR_RS08415 PF00107 Zinc-binding dehydrogenase UGYR_RS08415 PF08240 Alcohol dehydrogenase GroES-like domain UGYR_RS08420 PF09583 Phage shock protein G (Phageshock_PspG) UGYR_RS08425 PF01207 Dihydrouridine synthase (Dus) UGYR_RS08430 PF01475 Ferric uptake regulator family UGYR_RS08435 PF01726 LexA DNA binding domain UGYR_RS08435 PF00717 Peptidase S24-like UGYR_RS08440 PF01219 Prokaryotic diacylglycerol kinase UGYR_RS08445 PF01553 Acyltransferase UGYR_RS08450 PF01040 UbiA prenyltransferase family UGYR_RS08455 PF04345 Chorismate lyase UGYR_RS08460 PF07148 Maltose operon periplasmic protein precursor (MalM) UGYR_RS08465 PF02264 LamB porin UGYR_RS08470 PF17912 MalK OB fold domain UGYR_RS08470 PF00005 ABC transporter UGYR_RS08480 PF01547 Bacterial extracellular solute-binding protein UGYR_RS08485 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS08485 PF14785 Maltose transport system permease protein MalF P2 domain UGYR_RS08490 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS08495 PF06146 Phosphate-starvation-inducible E UGYR_RS08500 PF00342 Phosphoglucose isomerase UGYR_RS08505 PF01842 ACT domain UGYR_RS08505 PF00696 Amino acid kinase family UGYR_RS08510 PF08479 POTRA domain, ShlB-type UGYR_RS08510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB UGYR_RS08510 PF17287 POTRA domain UGYR_RS08515 PF13332 Hemagglutinin repeat UGYR_RS08515 PF05860 haemagglutination activity domain UGYR_RS08520 PF00872 Transposase, Mutator family UGYR_RS08525 PF09134 Invasin, domain 3 UGYR_RS08525 PF11924 Inverse autotransporter, beta-domain UGYR_RS08525 PF07979 Intimin C-type lectin domain UGYR_RS08525 PF02369 Bacterial Ig-like domain (group 1) UGYR_RS08535 PF04488 Glycosyltransferase sugar-binding region containing DXD motif UGYR_RS08545 PF16450 Proteasomal ATPase OB C-terminal domain UGYR_RS08545 PF00004 ATPase family associated with various cellular activities (AAA) UGYR_RS08545 PF17758 Proteasomal ATPase OB N-terminal domain UGYR_RS08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS08620 PF03466 LysR substrate binding domain UGYR_RS08635 PF02310 B12 binding domain UGYR_RS08635 PF02965 Vitamin B12 dependent methionine synthase, activation domain UGYR_RS08635 PF02607 B12 binding domain UGYR_RS08635 PF00809 Pterin binding enzyme UGYR_RS08635 PF02574 Homocysteine S-methyltransferase UGYR_RS08640 PF01614 Bacterial transcriptional regulator UGYR_RS08640 PF09339 IclR helix-turn-helix domain UGYR_RS08645 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) UGYR_RS08650 PF00463 Isocitrate lyase family UGYR_RS08655 PF01274 Malate synthase UGYR_RS08660 PF04204 Homoserine O-succinyltransferase UGYR_RS08695 PF02142 MGS-like domain UGYR_RS08695 PF01808 AICARFT/IMPCHase bienzyme UGYR_RS08700 PF02844 Phosphoribosylglycinamide synthetase, N domain UGYR_RS08700 PF02843 Phosphoribosylglycinamide synthetase, C domain UGYR_RS08700 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UGYR_RS08705 PF07356 Protein of unknown function (DUF1481) UGYR_RS08710 PF00216 Bacterial DNA-binding protein UGYR_RS08715 PF04222 Protein of unknown function (DUF416) UGYR_RS08720 PF04493 Endonuclease V UGYR_RS08725 PF01208 Uroporphyrinogen decarboxylase (URO-D) UGYR_RS08730 PF00293 NUDIX domain UGYR_RS08730 PF09297 NADH pyrophosphatase zinc ribbon domain UGYR_RS08735 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ UGYR_RS08740 PF01964 Radical SAM ThiC family UGYR_RS08740 PF13667 ThiC-associated domain UGYR_RS08745 PF02581 Thiamine monophosphate synthase UGYR_RS08750 PF00899 ThiF family UGYR_RS08755 PF02597 ThiS family UGYR_RS08760 PF05690 Thiazole biosynthesis protein ThiG UGYR_RS08765 PF06968 Biotin and Thiamin Synthesis associated domain UGYR_RS08765 PF04055 Radical SAM superfamily UGYR_RS08770 PF04997 RNA polymerase Rpb1, domain 1 UGYR_RS08770 PF00623 RNA polymerase Rpb1, domain 2 UGYR_RS08770 PF04983 RNA polymerase Rpb1, domain 3 UGYR_RS08770 PF05000 RNA polymerase Rpb1, domain 4 UGYR_RS08770 PF04998 RNA polymerase Rpb1, domain 5 UGYR_RS08775 PF04561 RNA polymerase Rpb2, domain 2 UGYR_RS08775 PF10385 RNA polymerase beta subunit external 1 domain UGYR_RS08775 PF00562 RNA polymerase Rpb2, domain 6 UGYR_RS08775 PF04563 RNA polymerase beta subunit UGYR_RS08775 PF04560 RNA polymerase Rpb2, domain 7 UGYR_RS08775 PF04565 RNA polymerase Rpb2, domain 3 UGYR_RS08780 PF16320 Ribosomal protein L7/L12 dimerisation domain UGYR_RS08780 PF00542 Ribosomal protein L7/L12 C-terminal domain UGYR_RS08785 PF00466 Ribosomal protein L10 UGYR_RS08790 PF00687 Ribosomal protein L1p/L10e family UGYR_RS08795 PF00298 Ribosomal protein L11, RNA binding domain UGYR_RS08795 PF03946 Ribosomal protein L11, N-terminal domain UGYR_RS08800 PF00467 KOW motif UGYR_RS08800 PF02357 Transcription termination factor nusG UGYR_RS08805 PF00584 SecE/Sec61-gamma subunits of protein translocation complex UGYR_RS08810 PF03143 Elongation factor Tu C-terminal domain UGYR_RS08810 PF00009 Elongation factor Tu GTP binding domain UGYR_RS08810 PF03144 Elongation factor Tu domain 2 UGYR_RS08835 PF00485 Phosphoribulokinase / Uridine kinase family UGYR_RS08840 PF02237 Biotin protein ligase C terminal domain UGYR_RS08840 PF08279 HTH domain UGYR_RS08840 PF03099 Biotin/lipoate A/B protein ligase family UGYR_RS08845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UGYR_RS08845 PF01565 FAD binding domain UGYR_RS08875 PF12724 Flavodoxin domain UGYR_RS08880 PF02386 Cation transport protein UGYR_RS08885 PF09186 Domain of unknown function (DUF1949) UGYR_RS08885 PF01205 Uncharacterized protein family UPF0029 UGYR_RS08890 PF00557 Metallopeptidase family M24 UGYR_RS08895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UGYR_RS08895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UGYR_RS08895 PF00378 Enoyl-CoA hydratase/isomerase UGYR_RS08900 PF02803 Thiolase, C-terminal domain UGYR_RS08900 PF00108 Thiolase, N-terminal domain UGYR_RS08905 PF00175 Oxidoreductase NAD-binding domain UGYR_RS08905 PF00970 Oxidoreductase FAD-binding domain UGYR_RS08910 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UGYR_RS08920 PF02357 Transcription termination factor nusG UGYR_RS08925 PF00490 Delta-aminolevulinic acid dehydratase UGYR_RS08930 PF01026 TatD related DNase UGYR_RS08935 PF00902 Sec-independent protein translocase protein (TatC) UGYR_RS08945 PF02416 mttA/Hcf106 family UGYR_RS08950 PF03109 ABC1 family UGYR_RS08955 PF02036 SCP-2 sterol transfer family UGYR_RS08960 PF01209 ubiE/COQ5 methyltransferase family UGYR_RS08965 PF02646 RmuC family UGYR_RS08970 PF09335 SNARE associated Golgi protein UGYR_RS08975 PF02554 Carbon starvation protein CstA UGYR_RS08975 PF13722 5TM C-terminal transporter carbon starvation CstA UGYR_RS08985 PF01048 Phosphorylase superfamily UGYR_RS08990 PF01738 Dienelactone hydrolase family UGYR_RS08995 PF01717 Cobalamin-independent synthase, Catalytic domain UGYR_RS08995 PF08267 Cobalamin-independent synthase, N-terminal domain UGYR_RS09000 PF03466 LysR substrate binding domain UGYR_RS09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS09005 PF00892 EamA-like transporter family UGYR_RS09015 PF03009 Glycerophosphoryl diester phosphodiesterase family UGYR_RS09020 PF17912 MalK OB fold domain UGYR_RS09020 PF00005 ABC transporter UGYR_RS09025 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS09030 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS09035 PF13416 Bacterial extracellular solute-binding protein UGYR_RS09070 PF00005 ABC transporter UGYR_RS09075 PF12399 Branched-chain amino acid ATP-binding cassette transporter UGYR_RS09075 PF00005 ABC transporter UGYR_RS09080 PF11862 Domain of unknown function (DUF3382) UGYR_RS09080 PF02653 Branched-chain amino acid transport system / permease component UGYR_RS09085 PF02653 Branched-chain amino acid transport system / permease component UGYR_RS09090 PF13458 Periplasmic binding protein UGYR_RS09095 PF12568 Acetyltransferase (GNAT) domain, PanZ UGYR_RS09100 PF02595 Glycerate kinase family UGYR_RS09105 PF02447 GntP family permease UGYR_RS09110 PF05651 Putative sugar diacid recognition UGYR_RS09110 PF17853 GGDEF-like domain UGYR_RS09110 PF13556 PucR C-terminal helix-turn-helix domain UGYR_RS09115 PF04545 Sigma-70, region 4 UGYR_RS09115 PF00140 Sigma-70 factor, region 1.2 UGYR_RS09115 PF04542 Sigma-70 region 2 UGYR_RS09120 PF02687 FtsX-like permease family UGYR_RS09120 PF18075 FtsX extracellular domain UGYR_RS09125 PF00005 ABC transporter UGYR_RS09130 PF00448 SRP54-type protein, GTPase domain UGYR_RS09130 PF00448 SRP54-type protein, GTPase domain UGYR_RS09130 PF02881 SRP54-type protein, helical bundle domain UGYR_RS09130 PF02881 SRP54-type protein, helical bundle domain UGYR_RS09140 PF06611 Protein of unknown function (DUF1145) UGYR_RS09155 PF07947 YhhN family UGYR_RS09160 PF00403 Heavy-metal-associated domain UGYR_RS09165 PF01206 Sulfurtransferase TusA UGYR_RS09170 PF02592 Putative vitamin uptake transporter UGYR_RS09175 PF08786 DcrB UGYR_RS09180 PF02754 Cysteine-rich domain UGYR_RS09180 PF13183 4Fe-4S dicluster domain UGYR_RS09185 PF00890 FAD binding domain UGYR_RS09190 PF04324 BFD-like [2Fe-2S] binding domain UGYR_RS09190 PF01266 FAD dependent oxidoreductase UGYR_RS09200 PF07690 Major Facilitator Superfamily UGYR_RS09205 PF03009 Glycerophosphoryl diester phosphodiesterase family UGYR_RS09215 PF12146 Serine aminopeptidase, S33 UGYR_RS09220 PF01810 LysE type translocator UGYR_RS09225 PF16124 RecQ zinc-binding UGYR_RS09225 PF09382 RQC domain UGYR_RS09225 PF00570 HRDC domain UGYR_RS09225 PF00271 Helicase conserved C-terminal domain UGYR_RS09225 PF00270 DEAD/DEAH box helicase UGYR_RS09230 PF02253 Phospholipase A1 UGYR_RS09235 PF03061 Thioesterase superfamily UGYR_RS09240 PF00892 EamA-like transporter family UGYR_RS09245 PF01544 CorA-like Mg2+ transporter protein UGYR_RS09255 PF09370 Phosphoenolpyruvate hydrolase-like UGYR_RS09270 PF00580 UvrD/REP helicase N-terminal domain UGYR_RS09270 PF13361 UvrD-like helicase C-terminal domain UGYR_RS09275 PF13419 Haloacid dehalogenase-like hydrolase UGYR_RS09280 PF02899 Phage integrase, N-terminal SAM-like domain UGYR_RS09280 PF00589 Phage integrase family UGYR_RS09285 PF04340 Protein of unknown function, DUF484 UGYR_RS09290 PF01678 Diaminopimelate epimerase UGYR_RS09295 PF13627 Prokaryotic lipoprotein-attachment site UGYR_RS09300 PF01491 Frataxin-like domain UGYR_RS09305 PF12633 Adenylate cyclase NT domain UGYR_RS09305 PF01295 Adenylate cyclase, class-I UGYR_RS09310 PF03900 Porphobilinogen deaminase, C-terminal domain UGYR_RS09310 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UGYR_RS09315 PF02602 Uroporphyrinogen-III synthase HemD UGYR_RS09320 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase UGYR_RS09325 PF07719 Tetratricopeptide repeat UGYR_RS09325 PF07219 HemY protein N-terminus UGYR_RS09355 PF00324 Amino acid permease UGYR_RS09360 PF03808 Glycosyl transferase WecB/TagA/CpsF family UGYR_RS09365 PF06899 WzyE protein, O-antigen assembly polymerase UGYR_RS09370 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 UGYR_RS09375 PF01943 Polysaccharide biosynthesis protein UGYR_RS09380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UGYR_RS09390 PF00483 Nucleotidyl transferase UGYR_RS09395 PF16363 GDP-mannose 4,6 dehydratase UGYR_RS09400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UGYR_RS09400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UGYR_RS09400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UGYR_RS09405 PF02350 UDP-N-acetylglucosamine 2-epimerase UGYR_RS09410 PF02706 Chain length determinant protein UGYR_RS09415 PF00953 Glycosyl transferase family 4 UGYR_RS09420 PF07497 Rho termination factor, RNA-binding domain UGYR_RS09420 PF07498 Rho termination factor, N-terminal domain UGYR_RS09420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UGYR_RS09425 PF00085 Thioredoxin UGYR_RS09430 PF00271 Helicase conserved C-terminal domain UGYR_RS09430 PF00270 DEAD/DEAH box helicase UGYR_RS09435 PF02541 Ppx/GppA phosphatase family UGYR_RS09440 PF13361 UvrD-like helicase C-terminal domain UGYR_RS09440 PF00580 UvrD/REP helicase N-terminal domain UGYR_RS09450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UGYR_RS09450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UGYR_RS09455 PF03466 LysR substrate binding domain UGYR_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS09460 PF18416 N-acetylglucosamine binding protein domain 2 UGYR_RS09460 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading UGYR_RS09465 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS09465 PF00585 C-terminal regulatory domain of Threonine dehydratase UGYR_RS09470 PF00920 Dehydratase family UGYR_RS09475 PF01063 Amino-transferase class IV UGYR_RS09485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UGYR_RS09485 PF00205 Thiamine pyrophosphate enzyme, central domain UGYR_RS09485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UGYR_RS09490 PF01078 Magnesium chelatase, subunit ChlI UGYR_RS09490 PF13335 Magnesium chelatase, subunit ChlI C-terminal UGYR_RS09495 PF04219 Protein of unknown function, DUF UGYR_RS09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS09500 PF03466 LysR substrate binding domain UGYR_RS09545 PF01177 Asp/Glu/Hydantoin racemase UGYR_RS09550 PF07715 TonB-dependent Receptor Plug Domain UGYR_RS09550 PF00593 TonB dependent receptor UGYR_RS09555 PF05958 tRNA (Uracil-5-)-methyltransferase UGYR_RS09560 PF07226 Protein of unknown function (DUF1422) UGYR_RS09565 PF00440 Bacterial regulatory proteins, tetR family UGYR_RS09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UGYR_RS09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS09575 PF03466 LysR substrate binding domain UGYR_RS09580 PF08534 Redoxin UGYR_RS09580 PF00462 Glutaredoxin UGYR_RS09585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UGYR_RS09585 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS09605 PF00529 HlyD membrane-fusion protein of T1SS UGYR_RS09610 PF00664 ABC transporter transmembrane region UGYR_RS09610 PF00005 ABC transporter UGYR_RS09620 PF00593 TonB dependent receptor UGYR_RS09620 PF07715 TonB-dependent Receptor Plug Domain UGYR_RS09625 PF14698 Argininosuccinate lyase C-terminal UGYR_RS09625 PF00206 Lyase UGYR_RS09630 PF00764 Arginosuccinate synthase UGYR_RS09635 PF00696 Amino acid kinase family UGYR_RS09640 PF02774 Semialdehyde dehydrogenase, dimerisation domain UGYR_RS09640 PF01118 Semialdehyde dehydrogenase, NAD binding domain UGYR_RS09645 PF01546 Peptidase family M20/M25/M40 UGYR_RS09645 PF07687 Peptidase dimerisation domain UGYR_RS09650 PF00311 Phosphoenolpyruvate carboxylase UGYR_RS09660 PF02219 Methylenetetrahydrofolate reductase UGYR_RS09675 PF00696 Amino acid kinase family UGYR_RS09675 PF00742 Homoserine dehydrogenase UGYR_RS09675 PF03447 Homoserine dehydrogenase, NAD binding domain UGYR_RS09680 PF01053 Cys/Met metabolism PLP-dependent enzyme UGYR_RS09685 PF01340 Met Apo-repressor, MetJ UGYR_RS09690 PF01197 Ribosomal protein L31 UGYR_RS09695 PF18074 Primosomal protein N C-terminal domain UGYR_RS09695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UGYR_RS09695 PF00270 DEAD/DEAH box helicase UGYR_RS09695 PF00271 Helicase conserved C-terminal domain UGYR_RS09695 PF17764 3′ DNA-binding domain (3′BD) UGYR_RS09700 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS09705 PF05036 Sporulation related domain UGYR_RS09710 PF00227 Proteasome subunit UGYR_RS09715 PF07724 AAA domain (Cdc48 subfamily) UGYR_RS09715 PF00004 ATPase family associated with various cellular activities (AAA) UGYR_RS09715 PF10431 C-terminal, D2-small domain, of ClpB protein UGYR_RS09720 PF01040 UbiA prenyltransferase family UGYR_RS09725 PF03737 Aldolase/RraA UGYR_RS09730 PF06005 Cell division protein ZapB UGYR_RS09735 PF00230 Major intrinsic protein UGYR_RS09740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UGYR_RS09740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UGYR_RS09745 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded UGYR_RS09750 PF07690 Major Facilitator Superfamily UGYR_RS09755 PF00970 Oxidoreductase FAD-binding domain UGYR_RS09755 PF00175 Oxidoreductase NAD-binding domain UGYR_RS09760 PF05656 Protein of unknown function (DUF805) UGYR_RS09765 PF07305 Protein of unknown function (DUF1454) UGYR_RS09770 PF00121 Triosephosphate isomerase UGYR_RS09780 PF00365 Phosphofructokinase UGYR_RS09785 PF16916 Dimerisation domain of Zinc Transporter UGYR_RS09785 PF01545 Cation efflux family UGYR_RS09790 PF07813 LTXXQ motif family protein UGYR_RS09795 PF00072 Response regulator receiver domain UGYR_RS09795 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS09800 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS09800 PF00672 HAMP domain UGYR_RS09800 PF16527 Two-component sensor protein CpxA, periplasmic domain UGYR_RS09805 PF00588 SpoU rRNA Methylase family UGYR_RS09810 PF00132 Bacterial transferase hexapeptide (six repeats) UGYR_RS09810 PF06426 Serine acetyltransferase, N-terminal UGYR_RS09815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UGYR_RS09815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UGYR_RS09820 PF02556 Preprotein translocase subunit SecB UGYR_RS09825 PF00462 Glutaredoxin UGYR_RS09830 PF00581 Rhodanese-like domain UGYR_RS09835 PF01676 Metalloenzyme superfamily UGYR_RS09835 PF06415 BPG-independent PGAM N-terminus (iPGM_N) UGYR_RS09840 PF01551 Peptidase family M23 UGYR_RS09845 PF04748 Divergent polysaccharide deacetylase UGYR_RS09850 PF08240 Alcohol dehydrogenase GroES-like domain UGYR_RS09850 PF00107 Zinc-binding dehydrogenase UGYR_RS09855 PF00155 Aminotransferase class I and II UGYR_RS09860 PF01370 NAD dependent epimerase/dehydratase family UGYR_RS09865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UGYR_RS09870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UGYR_RS09875 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) UGYR_RS09880 PF00535 Glycosyl transferase family 2 UGYR_RS09885 PF01467 Cytidylyltransferase-like UGYR_RS09890 PF06827 Zinc finger found in FPG and IleRS UGYR_RS09890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UGYR_RS09890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UGYR_RS09895 PF00471 Ribosomal protein L33 UGYR_RS09900 PF00830 Ribosomal L28 family UGYR_RS09905 PF04002 RadC-like JAB domain UGYR_RS09910 PF04127 DNA / pantothenate metabolism flavoprotein UGYR_RS09910 PF02441 Flavoprotein UGYR_RS09915 PF00692 dUTPase UGYR_RS09920 PF00440 Bacterial regulatory proteins, tetR family UGYR_RS09925 PF00156 Phosphoribosyl transferase domain UGYR_RS09930 PF03725 3' exoribonuclease family, domain 2 UGYR_RS09930 PF01138 3' exoribonuclease family, domain 1 UGYR_RS09935 PF08340 Domain of unknown function (DUF1732) UGYR_RS09935 PF03755 YicC-like family, N-terminal region UGYR_RS09945 PF03466 LysR substrate binding domain UGYR_RS09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS09950 PF13426 PAS domain UGYR_RS09950 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS09950 PF00563 EAL domain UGYR_RS09960 PF01527 Transposase UGYR_RS09965 PF13426 PAS domain UGYR_RS09965 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS09965 PF00563 EAL domain UGYR_RS09970 PF00378 Enoyl-CoA hydratase/isomerase UGYR_RS09975 PF01773 Na+ dependent nucleoside transporter N-terminus UGYR_RS09975 PF07662 Na+ dependent nucleoside transporter C-terminus UGYR_RS09975 PF07670 Nucleoside recognition UGYR_RS09985 PF03458 UPF0126 domain UGYR_RS09990 PF01653 NAD-dependent DNA ligase adenylation domain UGYR_RS09990 PF03120 NAD-dependent DNA ligase OB-fold domain UGYR_RS09995 PF00625 Guanylate kinase UGYR_RS10000 PF01192 RNA polymerase Rpb6 UGYR_RS10005 PF02824 TGS domain UGYR_RS10005 PF13291 ACT domain UGYR_RS10005 PF04607 Region found in RelA / SpoT proteins UGYR_RS10010 PF00588 SpoU rRNA Methylase family UGYR_RS10010 PF12105 SpoU, rRNA methylase, C-terminal UGYR_RS10015 PF00271 Helicase conserved C-terminal domain UGYR_RS10015 PF00270 DEAD/DEAH box helicase UGYR_RS10015 PF17191 RecG wedge domain UGYR_RS10020 PF03616 Sodium/glutamate symporter UGYR_RS10025 PF00860 Permease family UGYR_RS10030 PF05170 AsmA family UGYR_RS10035 PF00583 Acetyltransferase (GNAT) family UGYR_RS10035 PF09500 Putative thioesterase (yiiD_Cterm) UGYR_RS10040 PF02580 D-Tyr-tRNA(Tyr) deacylase UGYR_RS10045 PF03631 Virulence factor BrkB UGYR_RS10050 PF13419 Haloacid dehalogenase-like hydrolase UGYR_RS10055 PF00679 Elongation factor G C-terminus UGYR_RS10055 PF03144 Elongation factor Tu domain 2 UGYR_RS10055 PF00009 Elongation factor Tu GTP binding domain UGYR_RS10060 PF03951 Glutamine synthetase, beta-Grasp domain UGYR_RS10060 PF00120 Glutamine synthetase, catalytic domain UGYR_RS10065 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS10065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS10065 PF00989 PAS fold UGYR_RS10070 PF00072 Response regulator receiver domain UGYR_RS10070 PF02954 Bacterial regulatory protein, Fis family UGYR_RS10070 PF00158 Sigma-54 interaction domain UGYR_RS10075 PF06969 HemN C-terminal domain UGYR_RS10075 PF04055 Radical SAM superfamily UGYR_RS10080 PF04220 Der GTPase activator (YihI) UGYR_RS10085 PF01926 50S ribosome-binding GTPase UGYR_RS10090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UGYR_RS10090 PF00476 DNA polymerase family A UGYR_RS10090 PF01367 5'-3' exonuclease, C-terminal SAM fold UGYR_RS10090 PF01612 3'-5' exonuclease UGYR_RS10095 PF01323 DSBA-like thioredoxin domain UGYR_RS10100 PF01636 Phosphotransferase enzyme family UGYR_RS10105 PF06288 Protein of unknown function (DUF1040) UGYR_RS10110 PF12804 MobA-like NTP transferase domain UGYR_RS10115 PF03205 Molybdopterin guanine dinucleotide synthesis protein B UGYR_RS10140 PF07729 FCD domain UGYR_RS10140 PF00392 Bacterial regulatory proteins, gntR family UGYR_RS10145 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS10150 PF00294 pfkB family carbohydrate kinase UGYR_RS10155 PF13407 Periplasmic binding protein domain UGYR_RS10160 PF02653 Branched-chain amino acid transport system / permease component UGYR_RS10165 PF00005 ABC transporter UGYR_RS10170 PF05025 RbsD / FucU transport protein family UGYR_RS10175 PF02705 K+ potassium transporter UGYR_RS10180 PF07728 AAA domain (dynein-related subfamily) UGYR_RS10180 PF17868 AAA lid domain UGYR_RS10180 PF12592 Protein of unknown function (DUF3763) UGYR_RS10185 PF05762 VWA domain containing CoxE-like protein UGYR_RS10195 PF03590 Aspartate-ammonia ligase UGYR_RS10200 PF01037 Lrp/AsnC ligand binding domain UGYR_RS10205 PF00258 Flavodoxin UGYR_RS10210 PF01134 Glucose inhibited division protein A UGYR_RS10210 PF13932 GidA associated domain UGYR_RS10215 PF02527 rRNA small subunit methyltransferase G UGYR_RS10220 PF03899 ATP synthase I chain UGYR_RS10225 PF00119 ATP synthase A chain UGYR_RS10230 PF00137 ATP synthase subunit C UGYR_RS10235 PF00430 ATP synthase B/B' CF(0) UGYR_RS10240 PF00213 ATP synthase delta (OSCP) subunit UGYR_RS10245 PF00306 ATP synthase alpha/beta chain, C terminal domain UGYR_RS10245 PF02874 ATP synthase alpha/beta family, beta-barrel domain UGYR_RS10245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UGYR_RS10250 PF00231 ATP synthase UGYR_RS10255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UGYR_RS10255 PF02874 ATP synthase alpha/beta family, beta-barrel domain UGYR_RS10260 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UGYR_RS10260 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain UGYR_RS10265 PF12804 MobA-like NTP transferase domain UGYR_RS10265 PF00132 Bacterial transferase hexapeptide (six repeats) UGYR_RS10270 PF01380 SIS domain UGYR_RS10275 PF12849 PBP superfamily domain UGYR_RS10280 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS10290 PF00005 ABC transporter UGYR_RS10295 PF01895 PhoU domain UGYR_RS10300 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS10305 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS10310 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS10315 PF00860 Permease family UGYR_RS10320 PF02203 Tar ligand binding domain homologue UGYR_RS10320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS10320 PF00672 HAMP domain UGYR_RS10330 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS10330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS10335 PF13954 PapC N-terminal domain UGYR_RS10335 PF13953 PapC C-terminal domain UGYR_RS10335 PF00577 Outer membrane usher protein UGYR_RS10345 PF12631 MnmE helical domain UGYR_RS10345 PF10396 GTP-binding protein TrmE N-terminus UGYR_RS10345 PF01926 50S ribosome-binding GTPase UGYR_RS10350 PF14849 YidC periplasmic domain UGYR_RS10350 PF02096 60Kd inner membrane protein UGYR_RS10355 PF01809 Putative membrane protein insertion efficiency factor UGYR_RS10360 PF00825 Ribonuclease P UGYR_RS10365 PF00468 Ribosomal protein L34 UGYR_RS10370 PF11638 DnaA N-terminal domain UGYR_RS10370 PF08299 Bacterial dnaA protein helix-turn-helix UGYR_RS10370 PF00308 Bacterial dnaA protein UGYR_RS10375 PF02768 DNA polymerase III beta subunit, C-terminal domain UGYR_RS10375 PF02767 DNA polymerase III beta subunit, central domain UGYR_RS10375 PF00712 DNA polymerase III beta subunit, N-terminal domain UGYR_RS10380 PF02463 RecF/RecN/SMC N terminal domain UGYR_RS10385 PF01751 Toprim domain UGYR_RS10385 PF00204 DNA gyrase B UGYR_RS10385 PF00986 DNA gyrase B subunit, carboxyl terminus UGYR_RS10385 PF18053 DNA gyrase B subunit insert domain UGYR_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS10395 PF07676 WD40-like Beta Propeller Repeat UGYR_RS10395 PF12566 Protein of unknown function (DUF3748) UGYR_RS10400 PF07119 Protein of unknown function (DUF1375) UGYR_RS10405 PF00011 Hsp20/alpha crystallin family UGYR_RS10410 PF00011 Hsp20/alpha crystallin family UGYR_RS10415 PF02080 TrkA-C domain UGYR_RS10415 PF06826 Predicted Permease Membrane Region UGYR_RS10420 PF00155 Aminotransferase class I and II UGYR_RS10425 PF13488 Glycine zipper UGYR_RS10425 PF00691 OmpA family UGYR_RS10445 PF03352 Methyladenine glycosylase UGYR_RS10455 PF02091 Glycyl-tRNA synthetase alpha subunit UGYR_RS10460 PF05746 DALR anticodon binding domain UGYR_RS10460 PF02092 Glycyl-tRNA synthetase beta subunit UGYR_RS10465 PF11254 Protein of unknown function (DUF3053) UGYR_RS10495 PF02378 Phosphotransferase system, EIIC UGYR_RS10495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UGYR_RS10495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UGYR_RS10500 PF08125 Mannitol dehydrogenase C-terminal domain UGYR_RS10500 PF01232 Mannitol dehydrogenase Rossmann domain UGYR_RS10505 PF05068 Mannitol repressor UGYR_RS10510 PF10928 Protein of unknown function (DUF2810) UGYR_RS10515 PF03473 MOSC domain UGYR_RS10515 PF03475 3-alpha domain UGYR_RS10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS10520 PF02203 Tar ligand binding domain homologue UGYR_RS10520 PF00672 HAMP domain UGYR_RS10525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UGYR_RS10525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UGYR_RS10530 PF02634 FdhD/NarQ family UGYR_RS10535 PF01568 Molydopterin dinucleotide binding domain UGYR_RS10535 PF00384 Molybdopterin oxidoreductase UGYR_RS10535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UGYR_RS10540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UGYR_RS10540 PF00384 Molybdopterin oxidoreductase UGYR_RS10540 PF01568 Molydopterin dinucleotide binding domain UGYR_RS10545 PF09163 Formate dehydrogenase N, transmembrane UGYR_RS10545 PF13247 4Fe-4S dicluster domain UGYR_RS10550 PF01292 Prokaryotic cytochrome b561 UGYR_RS10555 PF04216 Protein involved in formate dehydrogenase formation UGYR_RS10560 PF03841 L-seryl-tRNA selenium transferase UGYR_RS10560 PF12390 Selenocysteine synthase N terminal UGYR_RS10565 PF09107 Elongation factor SelB, winged helix UGYR_RS10565 PF00009 Elongation factor Tu GTP binding domain UGYR_RS10565 PF03144 Elongation factor Tu domain 2 UGYR_RS10565 PF09106 Elongation factor SelB, winged helix UGYR_RS10570 PF01427 D-ala-D-ala dipeptidase UGYR_RS10575 PF07690 Major Facilitator Superfamily UGYR_RS10580 PF01757 Acyltransferase family UGYR_RS10585 PF13333 Integrase core domain UGYR_RS10585 PF13276 HTH-like domain UGYR_RS10585 PF00665 Integrase core domain UGYR_RS10590 PF01527 Transposase UGYR_RS10610 PF01175 Urocanase Rossmann-like domain UGYR_RS10610 PF17392 Urocanase C-terminal domain UGYR_RS10610 PF17391 Urocanase N-terminal domain UGYR_RS10615 PF00221 Aromatic amino acid lyase UGYR_RS10620 PF00324 Amino acid permease UGYR_RS10630 PF12146 Serine aminopeptidase, S33 UGYR_RS10635 PF00884 Sulfatase UGYR_RS10635 PF08019 Phosphoethanolamine transferase EptA/EptB UGYR_RS10640 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS10640 PF00072 Response regulator receiver domain UGYR_RS10645 PF07730 Histidine kinase UGYR_RS10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS10645 PF05231 MASE1 UGYR_RS10650 PF07690 Major Facilitator Superfamily UGYR_RS10660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS10665 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS10670 PF12911 N-terminal TM domain of oligopeptide transport permease C UGYR_RS10670 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS10675 PF00005 ABC transporter UGYR_RS10675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UGYR_RS10680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UGYR_RS10680 PF00005 ABC transporter UGYR_RS10685 PF11658 Cellulose biosynthesis protein BcsG UGYR_RS10690 PF11120 Cellulose biosynthesis protein BcsF UGYR_RS10695 PF10995 Cellulose biosynthesis GIL UGYR_RS10705 PF06564 Cellulose biosynthesis protein BcsQ UGYR_RS10710 PF07238 PilZ domain UGYR_RS10710 PF00535 Glycosyl transferase family 2 UGYR_RS10710 PF03552 Cellulose synthase UGYR_RS10715 PF03170 Bacterial cellulose synthase subunit UGYR_RS10720 PF01270 Glycosyl hydrolases family 8 UGYR_RS10725 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) UGYR_RS10730 PF17154 Gammaproteobacterial periplasmic sensor domain UGYR_RS10730 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS10730 PF00672 HAMP domain UGYR_RS10730 PF00563 EAL domain UGYR_RS10735 PF00375 Sodium:dicarboxylate symporter family UGYR_RS10740 PF00675 Insulinase (Peptidase family M16) UGYR_RS10740 PF05193 Peptidase M16 inactive domain UGYR_RS10745 PF00294 pfkB family carbohydrate kinase UGYR_RS10750 PF01361 Tautomerase enzyme UGYR_RS10755 PF00563 EAL domain UGYR_RS10760 PF02611 CDP-diacylglycerol pyrophosphatase UGYR_RS10765 PF03631 Virulence factor BrkB UGYR_RS10770 PF03466 LysR substrate binding domain UGYR_RS10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS10775 PF00375 Sodium:dicarboxylate symporter family UGYR_RS10780 PF01053 Cys/Met metabolism PLP-dependent enzyme UGYR_RS10785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UGYR_RS10785 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS10790 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ UGYR_RS10795 PF01432 Peptidase family M3 UGYR_RS10800 PF04445 Putative SAM-dependent methyltransferase UGYR_RS10805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UGYR_RS10805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UGYR_RS10810 PF00582 Universal stress protein family UGYR_RS10815 PF10625 Universal stress protein B (UspB) UGYR_RS10820 PF01384 Phosphate transporter family UGYR_RS10830 PF01810 LysE type translocator UGYR_RS10835 PF00583 Acetyltransferase (GNAT) family UGYR_RS10840 PF02678 Pirin UGYR_RS10840 PF17954 Quercetinase C-terminal cupin domain UGYR_RS10845 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS10845 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UGYR_RS10850 PF02447 GntP family permease UGYR_RS10855 PF01202 Shikimate kinase UGYR_RS10860 PF01914 MarC family integral membrane protein UGYR_RS10865 PF01118 Semialdehyde dehydrogenase, NAD binding domain UGYR_RS10865 PF02774 Semialdehyde dehydrogenase, dimerisation domain UGYR_RS10870 PF06580 Histidine kinase UGYR_RS10870 PF07694 5TMR of 5TMR-LYT UGYR_RS10875 PF00128 Alpha amylase, catalytic domain UGYR_RS10875 PF02806 Alpha amylase, C-terminal all-beta domain UGYR_RS10875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UGYR_RS10880 PF18390 Glycogen debranching enzyme C-terminal domain UGYR_RS10880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UGYR_RS10880 PF00128 Alpha amylase, catalytic domain UGYR_RS10885 PF00483 Nucleotidyl transferase UGYR_RS10890 PF00534 Glycosyl transferases group 1 UGYR_RS10890 PF08323 Starch synthase catalytic domain UGYR_RS10895 PF00343 Carbohydrate phosphorylase UGYR_RS10900 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UGYR_RS10900 PF01266 FAD dependent oxidoreductase UGYR_RS10905 PF08220 DeoR-like helix-turn-helix domain UGYR_RS10905 PF00455 DeoR C terminal sensor domain UGYR_RS10910 PF01694 Rhomboid family UGYR_RS10910 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease UGYR_RS10915 PF00581 Rhodanese-like domain UGYR_RS10920 PF17874 MalT-like TPR region UGYR_RS10920 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS10925 PF00343 Carbohydrate phosphorylase UGYR_RS10930 PF02446 4-alpha-glucanotransferase UGYR_RS10935 PF01521 Iron-sulphur cluster biosynthesis UGYR_RS10935 PF01106 NifU-like domain UGYR_RS10940 PF00156 Phosphoribosyl transferase domain UGYR_RS10945 PF00561 alpha/beta hydrolase fold UGYR_RS10955 PF09012 FeoC like transcriptional regulator UGYR_RS10960 PF07670 Nucleoside recognition UGYR_RS10960 PF02421 Ferrous iron transport protein B UGYR_RS10960 PF07664 Ferrous iron transport protein B C terminus UGYR_RS10960 PF17910 FeoB cytosolic helical domain UGYR_RS10965 PF04023 FeoA domain UGYR_RS10970 PF17674 HHH domain UGYR_RS10970 PF00575 S1 RNA binding domain UGYR_RS10970 PF16921 Tex protein YqgF-like domain UGYR_RS10970 PF09371 Tex-like protein N-terminal domain UGYR_RS10995 PF03449 Transcription elongation factor, N-terminal UGYR_RS10995 PF01272 Transcription elongation factor, GreA/GreB, C-term UGYR_RS11000 PF00072 Response regulator receiver domain UGYR_RS11000 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS11005 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS11005 PF00672 HAMP domain UGYR_RS11010 PF01293 Phosphoenolpyruvate carboxykinase UGYR_RS11015 PF01430 Hsp33 protein UGYR_RS11020 PF01479 S4 domain UGYR_RS11025 PF13419 Haloacid dehalogenase-like hydrolase UGYR_RS11030 PF07095 Intracellular growth attenuator protein IgaA UGYR_RS11035 PF00293 NUDIX domain UGYR_RS11040 PF00912 Transglycosylase UGYR_RS11040 PF17092 Penicillin-binding protein OB-like domain UGYR_RS11040 PF00905 Penicillin binding protein transpeptidase domain UGYR_RS11065 PF03958 Bacterial type II/III secretion system short domain UGYR_RS11065 PF00263 Bacterial type II and III secretion system protein UGYR_RS11070 PF01202 Shikimate kinase UGYR_RS11075 PF01761 3-dehydroquinate synthase UGYR_RS11080 PF05036 Sporulation related domain UGYR_RS11085 PF02086 D12 class N6 adenine-specific DNA methyltransferase UGYR_RS11090 PF00834 Ribulose-phosphate 3 epimerase family UGYR_RS11095 PF13419 Haloacid dehalogenase-like hydrolase UGYR_RS11100 PF00579 tRNA synthetases class I (W and Y) UGYR_RS11105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UGYR_RS11105 PF14824 Sirohaem biosynthesis protein central UGYR_RS11105 PF10414 Sirohaem synthase dimerisation region UGYR_RS11110 PF01226 Formate/nitrite transporter UGYR_RS11115 PF13806 Rieske-like [2Fe-2S] domain UGYR_RS11120 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UGYR_RS11120 PF18267 Rubredoxin NAD+ reductase C-terminal domain UGYR_RS11120 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS11120 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UGYR_RS11120 PF04324 BFD-like [2Fe-2S] binding domain UGYR_RS11125 PF07969 Amidohydrolase family UGYR_RS11130 PF07690 Major Facilitator Superfamily UGYR_RS11145 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS11150 PF11975 Family 4 glycosyl hydrolase C-terminal domain UGYR_RS11150 PF02056 Family 4 glycosyl hydrolase UGYR_RS11160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UGYR_RS11165 PF00117 Glutamine amidotransferase class-I UGYR_RS11170 PF00202 Aminotransferase class-III UGYR_RS11175 PF12805 FUSC-like inner membrane protein yccS UGYR_RS11180 PF00027 Cyclic nucleotide-binding domain UGYR_RS11180 PF13545 Crp-like helix-turn-helix domain UGYR_RS11185 PF02566 OsmC-like protein UGYR_RS11205 PF00156 Phosphoribosyl transferase domain UGYR_RS11210 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS11215 PF00485 Phosphoribulokinase / Uridine kinase family UGYR_RS11220 PF06794 Uncharacterised protein family (UPF0270) UGYR_RS11225 PF00561 alpha/beta hydrolase fold UGYR_RS11230 PF01810 LysE type translocator UGYR_RS11235 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UGYR_RS11240 PF00535 Glycosyl transferase family 2 UGYR_RS11245 PF00005 ABC transporter UGYR_RS11245 PF12848 ABC transporter UGYR_RS11250 PF02525 Flavodoxin-like fold UGYR_RS11255 PF02254 TrkA-N domain UGYR_RS11255 PF00999 Sodium/hydrogen exchanger family UGYR_RS11260 PF09526 Probable metal-binding protein (DUF2387) UGYR_RS11265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UGYR_RS11270 PF04102 SlyX UGYR_RS11275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase UGYR_RS11275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UGYR_RS11280 PF13309 HTH domain UGYR_RS11280 PF08348 YheO-like PAS domain UGYR_RS11285 PF02635 DsrE/DsrF-like family UGYR_RS11290 PF02635 DsrE/DsrF-like family UGYR_RS11295 PF04077 DsrH like protein UGYR_RS11300 PF00164 Ribosomal protein S12/S23 UGYR_RS11305 PF00177 Ribosomal protein S7p/S5e UGYR_RS11310 PF00679 Elongation factor G C-terminus UGYR_RS11310 PF14492 Elongation Factor G, domain II UGYR_RS11310 PF03144 Elongation factor Tu domain 2 UGYR_RS11310 PF00009 Elongation factor Tu GTP binding domain UGYR_RS11310 PF03764 Elongation factor G, domain IV UGYR_RS11315 PF00009 Elongation factor Tu GTP binding domain UGYR_RS11315 PF03144 Elongation factor Tu domain 2 UGYR_RS11315 PF03143 Elongation factor Tu C-terminal domain UGYR_RS11320 PF00210 Ferritin-like domain UGYR_RS11325 PF00338 Ribosomal protein S10p/S20e UGYR_RS11330 PF00297 Ribosomal protein L3 UGYR_RS11335 PF00573 Ribosomal protein L4/L1 family UGYR_RS11340 PF00276 Ribosomal protein L23 UGYR_RS11345 PF03947 Ribosomal Proteins L2, C-terminal domain UGYR_RS11345 PF00181 Ribosomal Proteins L2, RNA binding domain UGYR_RS11350 PF00203 Ribosomal protein S19 UGYR_RS11355 PF00237 Ribosomal protein L22p/L17e UGYR_RS11360 PF07650 KH domain UGYR_RS11360 PF00189 Ribosomal protein S3, C-terminal domain UGYR_RS11365 PF00252 Ribosomal protein L16p/L10e UGYR_RS11370 PF00831 Ribosomal L29 protein UGYR_RS11375 PF00366 Ribosomal protein S17 UGYR_RS11380 PF00238 Ribosomal protein L14p/L23e UGYR_RS11385 PF00467 KOW motif UGYR_RS11385 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UGYR_RS11390 PF00673 ribosomal L5P family C-terminus UGYR_RS11390 PF00281 Ribosomal protein L5 UGYR_RS11395 PF00253 Ribosomal protein S14p/S29e UGYR_RS11400 PF00410 Ribosomal protein S8 UGYR_RS11405 PF00347 Ribosomal protein L6 UGYR_RS11410 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UGYR_RS11415 PF03719 Ribosomal protein S5, C-terminal domain UGYR_RS11415 PF00333 Ribosomal protein S5, N-terminal domain UGYR_RS11420 PF00327 Ribosomal protein L30p/L7e UGYR_RS11425 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UGYR_RS11430 PF00344 SecY translocase UGYR_RS11435 PF00444 Ribosomal protein L36 UGYR_RS11440 PF00416 Ribosomal protein S13/S18 UGYR_RS11445 PF00411 Ribosomal protein S11 UGYR_RS11450 PF01479 S4 domain UGYR_RS11450 PF00163 Ribosomal protein S4/S9 N-terminal domain UGYR_RS11455 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UGYR_RS11455 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UGYR_RS11455 PF01000 RNA polymerase Rpb3/RpoA insert domain UGYR_RS11460 PF01196 Ribosomal protein L17 UGYR_RS11465 PF13411 MerR HTH family regulatory protein UGYR_RS11470 PF03889 Alternative ribosome-rescue factor A UGYR_RS11475 PF01741 Large-conductance mechanosensitive channel, MscL UGYR_RS11480 PF02080 TrkA-C domain UGYR_RS11480 PF02254 TrkA-N domain UGYR_RS11485 PF01029 NusB family UGYR_RS11485 PF01189 16S rRNA methyltransferase RsmB/F UGYR_RS11490 PF02911 Formyl transferase, C-terminal domain UGYR_RS11490 PF00551 Formyl transferase UGYR_RS11495 PF01327 Polypeptide deformylase UGYR_RS11500 PF02481 DNA recombination-mediator protein A UGYR_RS11500 PF17782 DprA winged helix domain UGYR_RS11505 PF04361 Protein of unknown function (DUF494) UGYR_RS11510 PF01300 Telomere recombination UGYR_RS11515 PF01488 Shikimate / quinate 5-dehydrogenase UGYR_RS11515 PF08501 Shikimate dehydrogenase substrate binding domain UGYR_RS11515 PF18317 Shikimate 5'-dehydrogenase C-terminal domain UGYR_RS11520 PF00132 Bacterial transferase hexapeptide (six repeats) UGYR_RS11550 PF00474 Sodium:solute symporter family UGYR_RS11555 PF04341 Protein of unknown function, DUF485 UGYR_RS11560 PF13193 AMP-binding enzyme C-terminal domain UGYR_RS11560 PF00501 AMP-binding enzyme UGYR_RS11560 PF16177 Acetyl-coenzyme A synthetase N-terminus UGYR_RS11565 PF00375 Sodium:dicarboxylate symporter family UGYR_RS11580 PF11412 Disulphide bond corrector protein DsbC UGYR_RS11580 PF02683 Cytochrome C biogenesis protein transmembrane region UGYR_RS11585 PF03091 CutA1 divalent ion tolerance protein UGYR_RS11590 PF03605 Anaerobic c4-dicarboxylate membrane transporter UGYR_RS11595 PF10415 Fumarase C C-terminus UGYR_RS11595 PF00206 Lyase UGYR_RS11600 PF04186 FxsA cytoplasmic membrane protein UGYR_RS11605 PF00166 Chaperonin 10 Kd subunit UGYR_RS11610 PF00118 TCP-1/cpn60 chaperonin family UGYR_RS11615 PF13698 Domain of unknown function (DUF4156) UGYR_RS11620 PF04055 Radical SAM superfamily UGYR_RS11625 PF09285 Elongation factor P, C-terminal UGYR_RS11625 PF01132 Elongation factor P (EF-P) OB domain UGYR_RS11625 PF08207 Elongation factor P (EF-P) KOW-like domain UGYR_RS11630 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading UGYR_RS11630 PF18416 N-acetylglucosamine binding protein domain 2 UGYR_RS11635 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS11645 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS11645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS11650 PF13953 PapC C-terminal domain UGYR_RS11650 PF00577 Outer membrane usher protein UGYR_RS11650 PF13954 PapC N-terminal domain UGYR_RS11655 PF00419 Fimbrial protein UGYR_RS11660 PF00893 Small Multidrug Resistance protein UGYR_RS11665 PF08212 Lipocalin-like domain UGYR_RS11670 PF02313 Fumarate reductase subunit D UGYR_RS11675 PF02300 Fumarate reductase subunit C UGYR_RS11680 PF13183 4Fe-4S dicluster domain UGYR_RS11680 PF13085 2Fe-2S iron-sulfur cluster binding domain UGYR_RS11685 PF00890 FAD binding domain UGYR_RS11685 PF02910 Fumarate reductase flavoprotein C-term UGYR_RS11690 PF00152 tRNA synthetases class II (D, K and N) UGYR_RS11695 PF12794 Mechanosensitive ion channel inner membrane domain 1 UGYR_RS11695 PF12795 Mechanosensitive ion channel porin domain UGYR_RS11695 PF00924 Mechanosensitive ion channel UGYR_RS11700 PF02666 Phosphatidylserine decarboxylase UGYR_RS11705 PF03193 RsgA GTPase UGYR_RS11710 PF00929 Exonuclease UGYR_RS11730 PF08331 Domain of unknown function (DUF1730) UGYR_RS11735 PF01256 Carbohydrate kinase UGYR_RS11735 PF03853 YjeF-related protein N-terminus UGYR_RS11740 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE UGYR_RS11745 PF01520 N-acetylmuramoyl-L-alanine amidase UGYR_RS11750 PF08676 MutL C terminal dimerisation domain UGYR_RS11750 PF01119 DNA mismatch repair protein, C-terminal domain UGYR_RS11760 PF17209 Hfq protein UGYR_RS11765 PF16360 GTP-binding GTPase Middle Region UGYR_RS11765 PF13167 GTP-binding GTPase N-terminal UGYR_RS11765 PF01926 50S ribosome-binding GTPase UGYR_RS11770 PF12221 Bacterial membrane protein N terminal UGYR_RS11770 PF01145 SPFH domain / Band 7 family UGYR_RS11775 PF01145 SPFH domain / Band 7 family UGYR_RS11780 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) UGYR_RS11785 PF00709 Adenylosuccinate synthetase UGYR_RS11790 PF02082 Transcriptional regulator UGYR_RS11795 PF08461 Ribonuclease R winged-helix domain UGYR_RS11795 PF17876 Cold shock domain UGYR_RS11795 PF08206 Ribonuclease B OB domain UGYR_RS11795 PF00773 RNB domain UGYR_RS11795 PF00575 S1 RNA binding domain UGYR_RS11800 PF08032 RNA 2'-O ribose methyltransferase substrate binding UGYR_RS11800 PF00588 SpoU rRNA Methylase family UGYR_RS11820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS11825 PF13954 PapC N-terminal domain UGYR_RS11825 PF13953 PapC C-terminal domain UGYR_RS11825 PF00577 Outer membrane usher protein UGYR_RS11845 PF00326 Prolyl oligopeptidase family UGYR_RS11855 PF01250 Ribosomal protein S6 UGYR_RS11860 PF00436 Single-strand binding protein family UGYR_RS11865 PF01084 Ribosomal protein S18 UGYR_RS11870 PF03948 Ribosomal protein L9, C-terminal domain UGYR_RS11870 PF01281 Ribosomal protein L9, N-terminal domain UGYR_RS11875 PF08525 Opacity-associated protein A N-terminal motif UGYR_RS11875 PF04225 Opacity-associated protein A LysM-like domain UGYR_RS11880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UGYR_RS11880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase UGYR_RS11885 PF01814 Hemerythrin HHE cation binding domain UGYR_RS11885 PF04405 Domain of Unknown function (DUF542) UGYR_RS11890 PF02872 5'-nucleotidase, C-terminal domain UGYR_RS11890 PF00149 Calcineurin-like phosphoesterase UGYR_RS11895 PF00459 Inositol monophosphatase family UGYR_RS11900 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) UGYR_RS11905 PF06526 Protein of unknown function (DUF1107) UGYR_RS11910 PF03471 Transporter associated domain UGYR_RS11910 PF01595 Cyclin M transmembrane N-terminal domain UGYR_RS11910 PF00571 CBS domain UGYR_RS11915 PF01625 Peptide methionine sulfoxide reductase UGYR_RS11920 PF17243 POTRA domain TamA domain 1 UGYR_RS11920 PF01103 Surface antigen UGYR_RS11920 PF07244 Surface antigen variable number repeat UGYR_RS11925 PF04357 TamB, inner membrane protein subunit of TAM complex UGYR_RS11930 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like UGYR_RS11935 PF00719 Inorganic pyrophosphatase UGYR_RS11940 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain UGYR_RS11945 PF02875 Mur ligase family, glutamate ligase domain UGYR_RS11945 PF01225 Mur ligase family, catalytic domain UGYR_RS11945 PF08245 Mur ligase middle domain UGYR_RS11950 PF01316 Arginine repressor, DNA binding domain UGYR_RS11950 PF02863 Arginine repressor, C-terminal domain UGYR_RS11955 PF00056 lactate/malate dehydrogenase, NAD binding domain UGYR_RS11955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UGYR_RS11960 PF13693 Winged helix-turn-helix DNA-binding UGYR_RS11975 PF00348 Polyprenyl synthetase UGYR_RS11980 PF00829 Ribosomal prokaryotic L21 protein UGYR_RS11985 PF01016 Ribosomal L27 protein UGYR_RS11990 PF00892 EamA-like transporter family UGYR_RS11995 PF01018 GTP1/OBG UGYR_RS11995 PF01926 50S ribosome-binding GTPase UGYR_RS12000 PF00672 HAMP domain UGYR_RS12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS12000 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS12005 PF00072 Response regulator receiver domain UGYR_RS12005 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS12010 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family UGYR_RS12015 PF01272 Transcription elongation factor, GreA/GreB, C-term UGYR_RS12015 PF03449 Transcription elongation factor, N-terminal UGYR_RS12020 PF01985 CRS1 / YhbY (CRM) domain UGYR_RS12025 PF01728 FtsJ-like methyltransferase UGYR_RS12030 PF01434 Peptidase family M41 UGYR_RS12030 PF06480 FtsH Extracellular UGYR_RS12030 PF17862 AAA+ lid domain UGYR_RS12030 PF00004 ATPase family associated with various cellular activities (AAA) UGYR_RS12035 PF00809 Pterin binding enzyme UGYR_RS12040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UGYR_RS12040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UGYR_RS12040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UGYR_RS12040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UGYR_RS12045 PF03840 Preprotein translocase SecG subunit UGYR_RS12060 PF17384 RimP C-terminal SH3 domain UGYR_RS12060 PF02576 RimP N-terminal domain UGYR_RS12065 PF13184 NusA-like KH domain UGYR_RS12065 PF00575 S1 RNA binding domain UGYR_RS12065 PF08529 NusA N-terminal domain UGYR_RS12070 PF08364 Bacterial translation initiation factor IF-2 associated region UGYR_RS12070 PF04760 Translation initiation factor IF-2, N-terminal region UGYR_RS12070 PF00009 Elongation factor Tu GTP binding domain UGYR_RS12070 PF03144 Elongation factor Tu domain 2 UGYR_RS12070 PF11987 Translation-initiation factor 2 UGYR_RS12075 PF02033 Ribosome-binding factor A UGYR_RS12080 PF09157 Pseudouridine synthase II TruB, C-terminal UGYR_RS12080 PF16198 tRNA pseudouridylate synthase B C-terminal domain UGYR_RS12080 PF01509 TruB family pseudouridylate synthase (N terminal domain) UGYR_RS12085 PF00312 Ribosomal protein S15 UGYR_RS12090 PF00013 KH domain UGYR_RS12090 PF00575 S1 RNA binding domain UGYR_RS12090 PF01138 3' exoribonuclease family, domain 1 UGYR_RS12090 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UGYR_RS12090 PF03725 3' exoribonuclease family, domain 2 UGYR_RS12095 PF13181 Tetratricopeptide repeat UGYR_RS12095 PF07719 Tetratricopeptide repeat UGYR_RS12100 PF03880 DbpA RNA binding domain UGYR_RS12100 PF00271 Helicase conserved C-terminal domain UGYR_RS12100 PF12343 Cold shock protein DEAD box A UGYR_RS12100 PF00270 DEAD/DEAH box helicase UGYR_RS12105 PF00296 Luciferase-like monooxygenase UGYR_RS12115 PF03313 Serine dehydratase alpha chain UGYR_RS12120 PF01136 Peptidase family U32 UGYR_RS12125 PF01136 Peptidase family U32 UGYR_RS12130 PF02036 SCP-2 sterol transfer family UGYR_RS12135 PF13508 Acetyltransferase (GNAT) domain UGYR_RS12140 PF01541 GIY-YIG catalytic domain UGYR_RS12145 PF13520 Amino acid permease UGYR_RS12150 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain UGYR_RS12150 PF01276 Orn/Lys/Arg decarboxylase, major domain UGYR_RS12150 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UGYR_RS12165 PF13460 NAD(P)H-binding UGYR_RS12170 PF12706 Beta-lactamase superfamily domain UGYR_RS12180 PF07969 Amidohydrolase family UGYR_RS12185 PF00005 ABC transporter UGYR_RS12190 PF00005 ABC transporter UGYR_RS12195 PF06007 Phosphonate metabolism protein PhnJ UGYR_RS12200 PF05861 Bacterial phosphonate metabolism protein (PhnI) UGYR_RS12205 PF05845 Bacterial phosphonate metabolism protein (PhnH) UGYR_RS12210 PF06754 Phosphonate metabolism protein PhnG UGYR_RS12220 PF13597 Anaerobic ribonucleoside-triphosphate reductase UGYR_RS12220 PF03477 ATP cone domain UGYR_RS12225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UGYR_RS12225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UGYR_RS12230 PF06877 Regulator of ribonuclease activity B UGYR_RS12235 PF00583 Acetyltransferase (GNAT) family UGYR_RS12240 PF08264 Anticodon-binding domain of tRNA UGYR_RS12240 PF00133 tRNA synthetases class I (I, L, M and V) UGYR_RS12240 PF10458 Valyl tRNA synthetase tRNA binding arm UGYR_RS12245 PF04364 DNA polymerase III chi subunit, HolC UGYR_RS12250 PF00883 Cytosol aminopeptidase family, catalytic domain UGYR_RS12250 PF02789 Cytosol aminopeptidase family, N-terminal domain UGYR_RS12255 PF03739 Lipopolysaccharide export system permease LptF/LptG UGYR_RS12260 PF03739 Lipopolysaccharide export system permease LptF/LptG UGYR_RS12270 PF13356 Arm DNA-binding domain UGYR_RS12270 PF00589 Phage integrase family UGYR_RS12275 PF00271 Helicase conserved C-terminal domain UGYR_RS12275 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UGYR_RS12275 PF04851 Type III restriction enzyme, res subunit UGYR_RS12275 PF08463 EcoEI R protein C-terminal UGYR_RS12280 PF02384 N-6 DNA Methylase UGYR_RS12285 PF01420 Type I restriction modification DNA specificity domain UGYR_RS12305 PF07728 AAA domain (dynein-related subfamily) UGYR_RS12305 PF12102 Domain of unknown function (DUF3578) UGYR_RS12350 PF06067 Domain of unknown function (DUF932) UGYR_RS12355 PF03230 Antirestriction protein UGYR_RS12360 PF06755 CbtA_toxin of type IV toxin-antitoxin system UGYR_RS12365 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A UGYR_RS12385 PF01527 Transposase UGYR_RS12390 PF00665 Integrase core domain UGYR_RS12390 PF13276 HTH-like domain UGYR_RS12390 PF13333 Integrase core domain UGYR_RS12420 PF00145 C-5 cytosine-specific DNA methylase UGYR_RS12440 PF01527 Transposase UGYR_RS12460 PF04221 RelB antitoxin UGYR_RS12465 PF05016 ParE toxin of type II toxin-antitoxin system, parDE UGYR_RS12490 PF13333 Integrase core domain UGYR_RS12490 PF00665 Integrase core domain UGYR_RS12490 PF13276 HTH-like domain UGYR_RS12510 PF03230 Antirestriction protein UGYR_RS12515 PF01344 Kelch motif UGYR_RS12520 PF06178 Oligogalacturonate-specific porin protein (KdgM) UGYR_RS12525 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain UGYR_RS12525 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain UGYR_RS12525 PF02278 Polysaccharide lyase family 8, super-sandwich domain UGYR_RS12540 PF02278 Polysaccharide lyase family 8, super-sandwich domain UGYR_RS12540 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain UGYR_RS12540 PF09092 Lyase, N terminal UGYR_RS12540 PF09093 Lyase, catalytic UGYR_RS12545 PF00884 Sulfatase UGYR_RS12555 PF08220 DeoR-like helix-turn-helix domain UGYR_RS12555 PF00455 DeoR C terminal sensor domain UGYR_RS12560 PF08013 Tagatose 6 phosphate kinase UGYR_RS12565 PF01380 SIS domain UGYR_RS12570 PF03830 PTS system sorbose subfamily IIB component UGYR_RS12575 PF03609 PTS system sorbose-specific iic component UGYR_RS12580 PF03613 PTS system mannose/fructose/sorbose family IID component UGYR_RS12590 PF01979 Amidohydrolase family UGYR_RS12595 PF04962 KduI/IolB family UGYR_RS12605 PF07470 Glycosyl Hydrolase Family 88 UGYR_RS12610 PF13186 Iron-sulfur cluster-binding domain UGYR_RS12610 PF04055 Radical SAM superfamily UGYR_RS12615 PF00884 Sulfatase UGYR_RS12625 PF01116 Fructose-bisphosphate aldolase class-II UGYR_RS12635 PF10696 Protein of unknown function (DUF2501) UGYR_RS12640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UGYR_RS12655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UGYR_RS12660 PF00873 AcrB/AcrD/AcrF family UGYR_RS12665 PF00465 Iron-containing alcohol dehydrogenase UGYR_RS12670 PF02733 Dak1 domain UGYR_RS12675 PF02734 DAK2 domain UGYR_RS12680 PF00391 PEP-utilising enzyme, mobile domain UGYR_RS12680 PF00381 PTS HPr component phosphorylation site UGYR_RS12680 PF05524 PEP-utilising enzyme, N-terminal UGYR_RS12680 PF03610 PTS system fructose IIA component UGYR_RS12685 PF00989 PAS fold UGYR_RS12685 PF00158 Sigma-54 interaction domain UGYR_RS12685 PF02954 Bacterial regulatory protein, Fis family UGYR_RS12690 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS12695 PF07256 Protein of unknown function (DUF1435) UGYR_RS12715 PF05175 Methyltransferase small domain UGYR_RS12715 PF08468 Methyltransferase small domain N-terminal UGYR_RS12720 PF03603 DNA polymerase III psi subunit UGYR_RS12725 PF00583 Acetyltransferase (GNAT) family UGYR_RS12730 PF00009 Elongation factor Tu GTP binding domain UGYR_RS12730 PF03144 Elongation factor Tu domain 2 UGYR_RS12730 PF16658 Class II release factor RF3, C-terminal domain UGYR_RS12735 PF04972 BON domain UGYR_RS12740 PF01734 Patatin-like phospholipase UGYR_RS12745 PF01026 TatD related DNase UGYR_RS12750 PF01773 Na+ dependent nucleoside transporter N-terminus UGYR_RS12750 PF07662 Na+ dependent nucleoside transporter C-terminus UGYR_RS12750 PF07670 Nucleoside recognition UGYR_RS12755 PF01791 DeoC/LacD family aldolase UGYR_RS12760 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain UGYR_RS12760 PF02885 Glycosyl transferase family, helical bundle domain UGYR_RS12760 PF00591 Glycosyl transferase family, a/b domain UGYR_RS12765 PF01676 Metalloenzyme superfamily UGYR_RS12770 PF01048 Phosphorylase superfamily UGYR_RS12775 PF10144 Bacterial virulence factor haemolysin UGYR_RS12780 PF18429 Domain of unknown function (DUF5609) UGYR_RS12785 PF18073 Rubredoxin metal binding domain UGYR_RS12790 PF13521 AAA domain UGYR_RS12790 PF01381 Helix-turn-helix UGYR_RS12795 PF12848 ABC transporter UGYR_RS12795 PF00005 ABC transporter UGYR_RS12800 PF00691 OmpA family UGYR_RS12810 PF00690 Cation transporter/ATPase, N-terminus UGYR_RS12810 PF00689 Cation transporting ATPase, C-terminus UGYR_RS12815 PF14718 Soluble lytic murein transglycosylase L domain UGYR_RS12815 PF01464 Transglycosylase SLT domain UGYR_RS12820 PF01371 Trp repressor protein UGYR_RS12825 PF01931 Protein of unknown function DUF84 UGYR_RS12830 PF00300 Histidine phosphatase superfamily (branch 1) UGYR_RS12835 PF12833 Helix-turn-helix domain UGYR_RS12835 PF06445 GyrI-like small molecule binding domain UGYR_RS12840 PF05981 CreA protein UGYR_RS12845 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS12845 PF00072 Response regulator receiver domain UGYR_RS12850 PF00742 Homoserine dehydrogenase UGYR_RS12850 PF03447 Homoserine dehydrogenase, NAD binding domain UGYR_RS12850 PF01842 ACT domain UGYR_RS12850 PF13840 ACT domain UGYR_RS12850 PF00696 Amino acid kinase family UGYR_RS12855 PF00288 GHMP kinases N terminal domain UGYR_RS12855 PF08544 GHMP kinases C terminal UGYR_RS12860 PF14821 Threonine synthase N terminus UGYR_RS12860 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS12865 PF03883 Peroxide stress protein YaaA UGYR_RS12870 PF00923 Transaldolase/Fructose-6-phosphate aldolase UGYR_RS12875 PF00994 Probable molybdopterin binding domain UGYR_RS12880 PF07690 Major Facilitator Superfamily UGYR_RS12890 PF01184 GPR1/FUN34/yaaH family UGYR_RS12895 PF00012 Hsp70 protein UGYR_RS12900 PF01556 DnaJ C terminal domain UGYR_RS12900 PF00684 DnaJ central domain UGYR_RS12900 PF00226 DnaJ domain UGYR_RS12905 PF06965 Na+/H+ antiporter 1 UGYR_RS12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS12910 PF03466 LysR substrate binding domain UGYR_RS12915 PF01649 Ribosomal protein S20 UGYR_RS12920 PF06574 FAD synthetase UGYR_RS12920 PF01687 Riboflavin kinase UGYR_RS12925 PF00133 tRNA synthetases class I (I, L, M and V) UGYR_RS12925 PF08264 Anticodon-binding domain of tRNA UGYR_RS12925 PF06827 Zinc finger found in FPG and IleRS UGYR_RS12930 PF01252 Signal peptidase (SPase) II UGYR_RS12935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UGYR_RS12940 PF02401 LytB protein UGYR_RS12945 PF05173 Dihydrodipicolinate reductase, C-terminus UGYR_RS12945 PF01113 Dihydrodipicolinate reductase, N-terminus UGYR_RS12950 PF00117 Glutamine amidotransferase class-I UGYR_RS12950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UGYR_RS12955 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UGYR_RS12955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UGYR_RS12955 PF02142 MGS-like domain UGYR_RS12960 PF01810 LysE type translocator UGYR_RS12965 PF06738 Putative threonine/serine exporter UGYR_RS12970 PF12821 Threonine/Serine exporter, ThrE UGYR_RS12975 PF00186 Dihydrofolate reductase UGYR_RS12985 PF00149 Calcineurin-like phosphoesterase UGYR_RS12990 PF04379 ApaG domain UGYR_RS12995 PF00398 Ribosomal RNA adenine dimethylase UGYR_RS13000 PF04166 Pyridoxal phosphate biosynthetic protein PdxA UGYR_RS13005 PF09312 SurA N-terminal domain UGYR_RS13005 PF00639 PPIC-type PPIASE domain UGYR_RS13010 PF04453 LPS transport system D UGYR_RS13010 PF03968 OstA-like protein UGYR_RS13015 PF05099 Tellurite resistance protein TerB UGYR_RS13015 PF00226 DnaJ domain UGYR_RS13020 PF00849 RNA pseudouridylate synthase UGYR_RS13025 PF00176 SNF2 family N-terminal domain UGYR_RS13025 PF12137 RNA polymerase recycling family C-terminal UGYR_RS13025 PF00271 Helicase conserved C-terminal domain UGYR_RS13025 PF18339 RapA N-terminal Tudor like domain 1 UGYR_RS13025 PF18337 RapA N-terminal Tudor like domain UGYR_RS13030 PF00136 DNA polymerase family B UGYR_RS13030 PF03104 DNA polymerase family B, exonuclease domain UGYR_RS13035 PF09335 SNARE associated Golgi protein UGYR_RS13040 PF00005 ABC transporter UGYR_RS13045 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS13055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS13055 PF12793 Sugar transport-related sRNA regulator N-term UGYR_RS13060 PF07690 Major Facilitator Superfamily UGYR_RS13065 PF00694 Aconitase C-terminal domain UGYR_RS13070 PF00330 Aconitase family (aconitate hydratase) UGYR_RS13075 PF00180 Isocitrate/isopropylmalate dehydrogenase UGYR_RS13080 PF08502 LeuA allosteric (dimerisation) domain UGYR_RS13080 PF00682 HMGL-like UGYR_RS13085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS13085 PF03466 LysR substrate binding domain UGYR_RS13090 PF00501 AMP-binding enzyme UGYR_RS13095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UGYR_RS13095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UGYR_RS13095 PF00205 Thiamine pyrophosphate enzyme, central domain UGYR_RS13100 PF10369 Small subunit of acetolactate synthase UGYR_RS13105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UGYR_RS13105 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS13110 PF01797 Transposase IS200 like UGYR_RS13115 PF07282 Putative transposase DNA-binding domain UGYR_RS13115 PF01385 Probable transposase UGYR_RS13115 PF12323 Helix-turn-helix domain UGYR_RS13120 PF06610 L-alanine exporter UGYR_RS13125 PF02381 MraZ protein, putative antitoxin-like UGYR_RS13130 PF01795 MraW methylase family UGYR_RS13135 PF04999 Cell division protein FtsL UGYR_RS13140 PF00905 Penicillin binding protein transpeptidase domain UGYR_RS13140 PF03717 Penicillin-binding Protein dimerisation domain UGYR_RS13145 PF08245 Mur ligase middle domain UGYR_RS13145 PF02875 Mur ligase family, glutamate ligase domain UGYR_RS13145 PF01225 Mur ligase family, catalytic domain UGYR_RS13150 PF02875 Mur ligase family, glutamate ligase domain UGYR_RS13150 PF08245 Mur ligase middle domain UGYR_RS13150 PF01225 Mur ligase family, catalytic domain UGYR_RS13155 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UGYR_RS13155 PF00953 Glycosyl transferase family 4 UGYR_RS13160 PF02875 Mur ligase family, glutamate ligase domain UGYR_RS13160 PF08245 Mur ligase middle domain UGYR_RS13165 PF01098 Cell cycle protein UGYR_RS13170 PF04101 Glycosyltransferase family 28 C-terminal domain UGYR_RS13170 PF03033 Glycosyltransferase family 28 N-terminal domain UGYR_RS13175 PF08245 Mur ligase middle domain UGYR_RS13175 PF02875 Mur ligase family, glutamate ligase domain UGYR_RS13175 PF01225 Mur ligase family, catalytic domain UGYR_RS13180 PF07478 D-ala D-ala ligase C-terminus UGYR_RS13180 PF01820 D-ala D-ala ligase N-terminus UGYR_RS13185 PF03799 Cell division protein FtsQ UGYR_RS13185 PF08478 POTRA domain, FtsQ-type UGYR_RS13190 PF02491 SHS2 domain inserted in FTSA UGYR_RS13195 PF00091 Tubulin/FtsZ family, GTPase domain UGYR_RS13195 PF12327 FtsZ family, C-terminal domain UGYR_RS13200 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase UGYR_RS13210 PF06558 Secretion monitor precursor protein (SecM) UGYR_RS13215 PF07517 SecA DEAD-like domain UGYR_RS13215 PF01043 SecA preprotein cross-linking domain UGYR_RS13215 PF07516 SecA Wing and Scaffold domain UGYR_RS13215 PF02810 SEC-C motif UGYR_RS13220 PF00293 NUDIX domain UGYR_RS13225 PF03884 DNA gyrase inhibitor YacG UGYR_RS13230 PF07072 Cell division protein UGYR_RS13235 PF01121 Dephospho-CoA kinase UGYR_RS13240 PF00478 IMP dehydrogenase / GMP reductase domain UGYR_RS13245 PF00482 Type II secretion system (T2SS), protein F UGYR_RS13250 PF00437 Type II/IV secretion system protein UGYR_RS13250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain UGYR_RS13255 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS13260 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UGYR_RS13260 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UGYR_RS13265 PF01510 N-acetylmuramoyl-L-alanine amidase UGYR_RS13270 PF17113 Regulatory signalling modulator protein AmpE UGYR_RS13275 PF00324 Amino acid permease UGYR_RS13280 PF07729 FCD domain UGYR_RS13280 PF00392 Bacterial regulatory proteins, gntR family UGYR_RS13285 PF00456 Transketolase, thiamine diphosphate binding domain UGYR_RS13285 PF17831 Pyruvate dehydrogenase E1 component middle domain UGYR_RS13290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UGYR_RS13290 PF00364 Biotin-requiring enzyme UGYR_RS13290 PF02817 e3 binding domain UGYR_RS13295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UGYR_RS13295 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS13305 PF11791 Aconitate B N-terminal domain UGYR_RS13305 PF00330 Aconitase family (aconitate hydratase) UGYR_RS13305 PF06434 Aconitate hydratase 2 N-terminus UGYR_RS13310 PF06062 Uncharacterised protein family (UPF0231) UGYR_RS13315 PF00892 EamA-like transporter family UGYR_RS13320 PF02675 S-adenosylmethionine decarboxylase UGYR_RS13325 PF17284 Spermidine synthase tetramerisation domain UGYR_RS13330 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) UGYR_RS13335 PF07731 Multicopper oxidase UGYR_RS13335 PF00394 Multicopper oxidase UGYR_RS13335 PF07732 Multicopper oxidase UGYR_RS13335 PF10518 TAT (twin-arginine translocation) pathway signal sequence UGYR_RS13340 PF00156 Phosphoribosyl transferase domain UGYR_RS13345 PF00484 Carbonic anhydrase UGYR_RS13350 PF00005 ABC transporter UGYR_RS13355 PF01061 ABC-2 type transporter UGYR_RS13360 PF01522 Polysaccharide deacetylase UGYR_RS13365 PF02261 Aspartate decarboxylase UGYR_RS13370 PF02569 Pantoate-beta-alanine ligase UGYR_RS13375 PF02548 Ketopantoate hydroxymethyltransferase UGYR_RS13380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UGYR_RS13385 PF12627 Probable RNA and SrmB- binding site of polymerase A UGYR_RS13385 PF12626 Polymerase A arginine-rich C-terminus UGYR_RS13385 PF01743 Poly A polymerase head domain UGYR_RS13390 PF00749 tRNA synthetases class I (E and Q), catalytic domain UGYR_RS13395 PF01258 Prokaryotic dksA/traR C4-type zinc finger UGYR_RS13400 PF03749 Sugar fermentation stimulation protein RE domain UGYR_RS13400 PF17746 SfsA N-terminal OB domain UGYR_RS13405 PF02834 LigT like Phosphoesterase UGYR_RS13410 PF08482 ATP-dependent helicase C-terminal UGYR_RS13410 PF00270 DEAD/DEAH box helicase UGYR_RS13410 PF04408 Helicase associated domain (HA2) UGYR_RS13410 PF00271 Helicase conserved C-terminal domain UGYR_RS13415 PF00905 Penicillin binding protein transpeptidase domain UGYR_RS13415 PF00912 Transglycosylase UGYR_RS13415 PF14814 Bifunctional transglycosylase second domain UGYR_RS13415 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal UGYR_RS13420 PF00202 Aminotransferase class-III UGYR_RS13425 PF00654 Voltage gated chloride channel UGYR_RS13430 PF01521 Iron-sulphur cluster biosynthesis UGYR_RS13435 PF03458 UPF0126 domain UGYR_RS13440 PF01497 Periplasmic binding protein UGYR_RS13445 PF01048 Phosphorylase superfamily UGYR_RS13450 PF13286 Phosphohydrolase-associated domain UGYR_RS13450 PF01966 HD domain UGYR_RS13455 PF00595 PDZ domain UGYR_RS13460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UGYR_RS13460 PF01627 Hpt domain UGYR_RS13460 PF00672 HAMP domain UGYR_RS13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS13460 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS13460 PF00072 Response regulator receiver domain UGYR_RS13465 PF01938 TRAM domain UGYR_RS13465 PF05958 tRNA (Uracil-5-)-methyltransferase UGYR_RS13470 PF13291 ACT domain UGYR_RS13470 PF04607 Region found in RelA / SpoT proteins UGYR_RS13470 PF02824 TGS domain UGYR_RS13475 PF03819 MazG nucleotide pyrophosphohydrolase domain UGYR_RS13480 PF06418 CTP synthase N-terminus UGYR_RS13480 PF00117 Glutamine amidotransferase class-I UGYR_RS13485 PF00113 Enolase, C-terminal TIM barrel domain UGYR_RS13485 PF03952 Enolase, N-terminal domain UGYR_RS13490 PF04055 Radical SAM superfamily UGYR_RS13495 PF01242 6-pyruvoyl tetrahydropterin synthase UGYR_RS13500 PF00175 Oxidoreductase NAD-binding domain UGYR_RS13500 PF00667 FAD binding domain UGYR_RS13500 PF00258 Flavodoxin UGYR_RS13505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UGYR_RS13505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UGYR_RS13510 PF01507 Phosphoadenosine phosphosulfate reductase family UGYR_RS13525 PF04389 Peptidase family M28 UGYR_RS13530 PF14824 Sirohaem biosynthesis protein central UGYR_RS13530 PF10414 Sirohaem synthase dimerisation region UGYR_RS13530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UGYR_RS13535 PF01507 Phosphoadenosine phosphosulfate reductase family UGYR_RS13540 PF00009 Elongation factor Tu GTP binding domain UGYR_RS13550 PF12084 Protein of unknown function (DUF3561) UGYR_RS13555 PF04977 Septum formation initiator UGYR_RS13560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UGYR_RS13565 PF02542 YgbB family UGYR_RS13570 PF01142 tRNA pseudouridine synthase D (TruD) UGYR_RS13575 PF01975 Survival protein SurE UGYR_RS13585 PF01476 LysM domain UGYR_RS13585 PF01551 Peptidase family M23 UGYR_RS13590 PF04545 Sigma-70, region 4 UGYR_RS13590 PF00140 Sigma-70 factor, region 1.2 UGYR_RS13590 PF04542 Sigma-70 region 2 UGYR_RS13590 PF04539 Sigma-70 region 3 UGYR_RS13595 PF05192 MutS domain III UGYR_RS13595 PF05190 MutS family domain IV UGYR_RS13595 PF05188 MutS domain II UGYR_RS13595 PF01624 MutS domain I UGYR_RS13595 PF00488 MutS domain V UGYR_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS13655 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS13655 PF00072 Response regulator receiver domain UGYR_RS13655 PF09308 LuxQ, periplasmic UGYR_RS13660 PF00072 Response regulator receiver domain UGYR_RS13660 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS13675 PF01464 Transglycosylase SLT domain UGYR_RS13695 PF01514 Secretory protein of YscJ/FliF family UGYR_RS13715 PF12833 Helix-turn-helix domain UGYR_RS13720 PF00263 Bacterial type II and III secretion system protein UGYR_RS13720 PF03958 Bacterial type II/III secretion system short domain UGYR_RS13725 PF07201 HrpJ-like domain UGYR_RS13730 PF00771 FHIPEP family UGYR_RS13740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UGYR_RS13740 PF02874 ATP synthase alpha/beta family, beta-barrel domain UGYR_RS13740 PF18269 T3SS EscN ATPase C-terminal domain UGYR_RS13755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UGYR_RS13760 PF00813 FliP family UGYR_RS13765 PF01313 Bacterial export proteins, family 3 UGYR_RS13770 PF01311 Bacterial export proteins, family 1 UGYR_RS13775 PF01312 FlhB HrpN YscU SpaS Family UGYR_RS13780 PF07720 Tetratricopeptide repeat UGYR_RS13805 PF00550 Phosphopantetheine attachment site UGYR_RS13825 PF18416 N-acetylglucosamine binding protein domain 2 UGYR_RS13825 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading UGYR_RS13830 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) UGYR_RS13835 PF06750 Bacterial Peptidase A24 N-terminal domain UGYR_RS13835 PF01478 Type IV leader peptidase family UGYR_RS13845 PF05134 Type II secretion system (T2SS), protein L UGYR_RS13845 PF12693 GspL periplasmic domain UGYR_RS13850 PF03934 Type II secretion system (T2SS), protein K UGYR_RS13855 PF11612 Type II secretion system (T2SS), protein J UGYR_RS13855 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS13860 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS13860 PF02501 Type II secretion system (T2SS), protein I UGYR_RS13865 PF12019 Type II transport protein GspH UGYR_RS13865 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS13870 PF08334 Type II secretion system (T2SS), protein G UGYR_RS13870 PF07963 Prokaryotic N-terminal methylation motif UGYR_RS13875 PF00482 Type II secretion system (T2SS), protein F UGYR_RS13880 PF00437 Type II/IV secretion system protein UGYR_RS13885 PF00263 Bacterial type II and III secretion system protein UGYR_RS13885 PF03958 Bacterial type II/III secretion system short domain UGYR_RS13890 PF11356 Type II secretion system protein C UGYR_RS13915 PF05681 Fumarate hydratase (Fumerase) UGYR_RS13915 PF05683 Fumarase C-terminus UGYR_RS13920 PF07690 Major Facilitator Superfamily UGYR_RS13925 PF02464 Competence-damaged protein UGYR_RS13930 PF00154 recA bacterial DNA recombination protein UGYR_RS13935 PF02631 RecX family UGYR_RS13940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UGYR_RS13940 PF02272 DHHA1 domain UGYR_RS13940 PF01411 tRNA synthetases class II (A) UGYR_RS13945 PF02599 Global regulator protein family UGYR_RS13970 PF13419 Haloacid dehalogenase-like hydrolase UGYR_RS13975 PF09335 SNARE associated Golgi protein UGYR_RS13980 PF04262 Glutamate-cysteine ligase UGYR_RS13985 PF02664 S-Ribosylhomocysteinase (LuxS) UGYR_RS13990 PF01595 Cyclin M transmembrane N-terminal domain UGYR_RS13990 PF03471 Transporter associated domain UGYR_RS13990 PF00571 CBS domain UGYR_RS13995 PF01578 Cytochrome C assembly protein UGYR_RS14000 PF00448 SRP54-type protein, GTPase domain UGYR_RS14000 PF02978 Signal peptide binding domain UGYR_RS14000 PF02881 SRP54-type protein, helical bundle domain UGYR_RS14005 PF00886 Ribosomal protein S16 UGYR_RS14010 PF05239 PRC-barrel domain UGYR_RS14010 PF01782 RimM N-terminal domain UGYR_RS14015 PF01746 tRNA (Guanine-1)-methyltransferase UGYR_RS14020 PF01245 Ribosomal protein L19 UGYR_RS14025 PF04338 Protein of unknown function, DUF481 UGYR_RS14030 PF03605 Anaerobic c4-dicarboxylate membrane transporter UGYR_RS14035 PF04397 LytTr DNA-binding domain UGYR_RS14035 PF00072 Response regulator receiver domain UGYR_RS14040 PF00793 DAHP synthetase I family UGYR_RS14045 PF01817 Chorismate mutase type II UGYR_RS14045 PF02153 Prephenate dehydrogenase UGYR_RS14050 PF01817 Chorismate mutase type II UGYR_RS14050 PF00800 Prephenate dehydratase UGYR_RS14055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UGYR_RS14060 PF13525 Outer membrane lipoprotein UGYR_RS14065 PF00849 RNA pseudouridylate synthase UGYR_RS14065 PF01479 S4 domain UGYR_RS14070 PF02578 Multi-copper polyphenol oxidoreductase laccase UGYR_RS14110 PF03372 Endonuclease/Exonuclease/phosphatase family UGYR_RS14115 PF01476 LysM domain UGYR_RS14115 PF01464 Transglycosylase SLT domain UGYR_RS14120 PF00753 Metallo-beta-lactamase superfamily UGYR_RS14120 PF16123 Hydroxyacylglutathione hydrolase C-terminus UGYR_RS14125 PF08241 Methyltransferase domain UGYR_RS14130 PF00075 RNase H UGYR_RS14135 PF00929 Exonuclease UGYR_RS14145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UGYR_RS14145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UGYR_RS14145 PF09317 Domain of unknown function (DUF1974) UGYR_RS14150 PF13580 SIS domain UGYR_RS14155 PF13230 Glutamine amidotransferases class-II UGYR_RS14160 PF03734 L,D-transpeptidase catalytic domain UGYR_RS14165 PF11973 NQRA C-terminal domain UGYR_RS14165 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) UGYR_RS14170 PF03116 NQR2, RnfD, RnfE family UGYR_RS14175 PF04205 FMN-binding domain UGYR_RS14180 PF02508 Rnf-Nqr subunit, membrane protein UGYR_RS14185 PF02508 Rnf-Nqr subunit, membrane protein UGYR_RS14190 PF00175 Oxidoreductase NAD-binding domain UGYR_RS14190 PF00111 2Fe-2S iron-sulfur cluster binding domain UGYR_RS14190 PF00970 Oxidoreductase FAD-binding domain UGYR_RS14195 PF02424 ApbE family UGYR_RS14200 PF04400 (Na+)-NQR maturation NqrM UGYR_RS14205 PF03009 Glycerophosphoryl diester phosphodiesterase family UGYR_RS14210 PF00817 impB/mucB/samB family UGYR_RS14210 PF11798 IMS family HHH motif UGYR_RS14210 PF11799 impB/mucB/samB family C-terminal domain UGYR_RS14215 PF07687 Peptidase dimerisation domain UGYR_RS14215 PF01546 Peptidase family M20/M25/M40 UGYR_RS14220 PF00156 Phosphoribosyl transferase domain UGYR_RS14225 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) UGYR_RS14230 PF07417 Sigma factor-binding transcriptional regulator Crl UGYR_RS14235 PF00696 Amino acid kinase family UGYR_RS14235 PF01472 PUA domain UGYR_RS14240 PF00171 Aldehyde dehydrogenase family UGYR_RS14245 PF07238 PilZ domain UGYR_RS14245 PF07317 Flagellar regulator YcgR UGYR_RS14270 PF07715 TonB-dependent Receptor Plug Domain UGYR_RS14270 PF00593 TonB dependent receptor UGYR_RS14275 PF01202 Shikimate kinase UGYR_RS14295 PF07302 AroM protein UGYR_RS14300 PF06865 Pyrimidine/purine nucleoside phosphorylase UGYR_RS14305 PF04381 Putative exonuclease, RdgC UGYR_RS14310 PF00480 ROK family UGYR_RS14315 PF13476 AAA domain UGYR_RS14325 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS14325 PF00072 Response regulator receiver domain UGYR_RS14330 PF00989 PAS fold UGYR_RS14330 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS14330 PF11808 Phosphate regulon sensor protein PhoR UGYR_RS14335 PF12849 PBP superfamily domain UGYR_RS14340 PF05525 Branched-chain amino acid transport protein UGYR_RS14345 PF00324 Amino acid permease UGYR_RS14350 PF00128 Alpha amylase, catalytic domain UGYR_RS14350 PF02903 Alpha amylase, N-terminal ig-like domain UGYR_RS14360 PF10417 C-terminal domain of 1-Cys peroxiredoxin UGYR_RS14360 PF00578 AhpC/TSA family UGYR_RS14365 PF04336 Acyl carrier protein phosphodiesterase UGYR_RS14370 PF02547 Queuosine biosynthesis protein UGYR_RS14375 PF01702 Queuine tRNA-ribosyltransferase UGYR_RS14380 PF02699 Preprotein translocase subunit UGYR_RS14385 PF07549 SecD/SecF GG Motif UGYR_RS14385 PF02355 Protein export membrane protein UGYR_RS14385 PF13721 SecD export protein N-terminal TM region UGYR_RS14390 PF02355 Protein export membrane protein UGYR_RS14390 PF07549 SecD/SecF GG Motif UGYR_RS14395 PF03477 ATP cone domain UGYR_RS14400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UGYR_RS14400 PF01872 RibD C-terminal domain UGYR_RS14405 PF00885 6,7-dimethyl-8-ribityllumazine synthase UGYR_RS14410 PF01029 NusB family UGYR_RS14415 PF00586 AIR synthase related protein, N-terminal domain UGYR_RS14415 PF02769 AIR synthase related protein, C-terminal domain UGYR_RS14420 PF04608 Phosphatidylglycerophosphatase A UGYR_RS14425 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UGYR_RS14425 PF02780 Transketolase, C-terminal domain UGYR_RS14425 PF02779 Transketolase, pyrimidine binding domain UGYR_RS14430 PF00348 Polyprenyl synthetase UGYR_RS14435 PF02609 Exonuclease VII small subunit UGYR_RS14440 PF02568 Thiamine biosynthesis protein (ThiI) UGYR_RS14440 PF02926 THUMP domain UGYR_RS14445 PF00072 Response regulator receiver domain UGYR_RS14445 PF14532 Sigma-54 interaction domain UGYR_RS14445 PF02954 Bacterial regulatory protein, Fis family UGYR_RS14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS14450 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS14450 PF00672 HAMP domain UGYR_RS14460 PF07690 Major Facilitator Superfamily UGYR_RS14465 PF01965 DJ-1/PfpI family UGYR_RS14470 PF02558 Ketopantoate reductase PanE/ApbA UGYR_RS14470 PF08546 Ketopantoate reductase PanE/ApbA C terminal UGYR_RS14475 PF04461 Protein of unknown function (DUF520) UGYR_RS14480 PF07690 Major Facilitator Superfamily UGYR_RS14485 PF01040 UbiA prenyltransferase family UGYR_RS14490 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UGYR_RS14495 PF00510 Cytochrome c oxidase subunit III UGYR_RS14500 PF00115 Cytochrome C and Quinol oxidase polypeptide I UGYR_RS14505 PF06481 COX Aromatic Rich Motif UGYR_RS14505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UGYR_RS14510 PF03502 Nucleoside-specific channel-forming protein, Tsx UGYR_RS14515 PF07690 Major Facilitator Superfamily UGYR_RS14520 PF08139 Prokaryotic membrane lipoprotein lipid attachment site UGYR_RS14520 PF03923 Uncharacterized lipoprotein UGYR_RS14525 PF01722 BolA-like protein UGYR_RS14530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UGYR_RS14530 PF05697 Bacterial trigger factor protein (TF) UGYR_RS14530 PF05698 Bacterial trigger factor protein (TF) C-terminus UGYR_RS14535 PF00574 Clp protease UGYR_RS14540 PF06689 ClpX C4-type zinc finger UGYR_RS14540 PF10431 C-terminal, D2-small domain, of ClpB protein UGYR_RS14540 PF07724 AAA domain (Cdc48 subfamily) UGYR_RS14545 PF02190 ATP-dependent protease La (LON) substrate-binding domain UGYR_RS14545 PF05362 Lon protease (S16) C-terminal proteolytic domain UGYR_RS14545 PF00004 ATPase family associated with various cellular activities (AAA) UGYR_RS14550 PF00216 Bacterial DNA-binding protein UGYR_RS14555 PF13145 PPIC-type PPIASE domain UGYR_RS14570 PF06508 Queuosine biosynthesis protein QueC UGYR_RS14575 PF12793 Sugar transport-related sRNA regulator N-term UGYR_RS14575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UGYR_RS14590 PF13404 AsnC-type helix-turn-helix domain UGYR_RS14590 PF01037 Lrp/AsnC ligand binding domain UGYR_RS14595 PF00664 ABC transporter transmembrane region UGYR_RS14595 PF00005 ABC transporter UGYR_RS14600 PF00005 ABC transporter UGYR_RS14600 PF00664 ABC transporter transmembrane region UGYR_RS14605 PF00543 Nitrogen regulatory protein P-II UGYR_RS14610 PF00909 Ammonium Transporter Family UGYR_RS14620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UGYR_RS14625 PF05321 Haemolysin expression modulating protein UGYR_RS14630 PF10757 Biofilm formation regulator YbaJ UGYR_RS14640 PF01197 Ribosomal protein L31 UGYR_RS14645 PF00873 AcrB/AcrD/AcrF family UGYR_RS14650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UGYR_RS14650 PF00529 HlyD membrane-fusion protein of T1SS UGYR_RS14655 PF00440 Bacterial regulatory proteins, tetR family UGYR_RS14655 PF08361 MAATS-type transcriptional repressor, C-terminal region UGYR_RS14660 PF02635 DsrE/DsrF-like family UGYR_RS14665 PF12794 Mechanosensitive ion channel inner membrane domain 1 UGYR_RS14665 PF12795 Mechanosensitive ion channel porin domain UGYR_RS14665 PF00924 Mechanosensitive ion channel UGYR_RS14675 PF04304 Protein of unknown function (DUF454) UGYR_RS14680 PF00156 Phosphoribosyl transferase domain UGYR_RS14685 PF01970 Tripartite tricarboxylate transporter TctA family UGYR_RS14700 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS14700 PF00072 Response regulator receiver domain UGYR_RS14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS14705 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS14710 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding UGYR_RS14710 PF12170 DNA polymerase III tau subunit V interacting with alpha UGYR_RS14710 PF12169 DNA polymerase III subunits gamma and tau domain III UGYR_RS14715 PF02575 YbaB/EbfC DNA-binding family UGYR_RS14720 PF13662 Toprim domain UGYR_RS14720 PF02132 RecR protein UGYR_RS14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS14725 PF00183 Hsp90 protein UGYR_RS14730 PF05191 Adenylate kinase, active site lid UGYR_RS14735 PF00762 Ferrochelatase UGYR_RS14740 PF02706 Chain length determinant protein UGYR_RS14745 PF00294 pfkB family carbohydrate kinase UGYR_RS14750 PF02254 TrkA-N domain UGYR_RS14750 PF00999 Sodium/hydrogen exchanger family UGYR_RS14755 PF02872 5'-nucleotidase, C-terminal domain UGYR_RS14755 PF00149 Calcineurin-like phosphoesterase UGYR_RS14770 PF08242 Methyltransferase domain UGYR_RS14785 PF02350 UDP-N-acetylglucosamine 2-epimerase UGYR_RS14795 PF02719 Polysaccharide biosynthesis protein UGYR_RS14795 PF08485 Polysaccharide biosynthesis protein C-terminal UGYR_RS14810 PF04073 Aminoacyl-tRNA editing domain UGYR_RS14815 PF01963 TraB family UGYR_RS14820 PF00403 Heavy-metal-associated domain UGYR_RS14825 PF13411 MerR HTH family regulatory protein UGYR_RS14830 PF01957 NfeD-like C-terminal, partner-binding UGYR_RS14835 PF01145 SPFH domain / Band 7 family UGYR_RS14835 PF16200 C-terminal region of band_7 UGYR_RS14840 PF00085 Thioredoxin UGYR_RS14845 PF00106 short chain dehydrogenase UGYR_RS14850 PF13472 GDSL-like Lipase/Acylhydrolase family UGYR_RS14855 PF00005 ABC transporter UGYR_RS14865 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain UGYR_RS14865 PF02222 ATP-grasp domain UGYR_RS14870 PF00731 AIR carboxylase UGYR_RS14875 PF00149 Calcineurin-like phosphoesterase UGYR_RS14880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UGYR_RS14885 PF09190 DALR domain UGYR_RS14885 PF01406 tRNA synthetases class I (C) catalytic domain UGYR_RS14900 PF00419 Fimbrial protein UGYR_RS14905 PF00577 Outer membrane usher protein UGYR_RS14905 PF13953 PapC C-terminal domain UGYR_RS14905 PF13954 PapC N-terminal domain UGYR_RS14910 PF02753 Pili assembly chaperone PapD, C-terminal domain UGYR_RS14910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain UGYR_RS14945 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UGYR_RS14945 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UGYR_RS14955 PF01022 Bacterial regulatory protein, arsR family UGYR_RS14960 PF02040 Arsenical pump membrane protein UGYR_RS14965 PF03960 ArsC family UGYR_RS14975 PF00501 AMP-binding enzyme UGYR_RS15000 PF01292 Prokaryotic cytochrome b561 UGYR_RS15010 PF00343 Carbohydrate phosphorylase UGYR_RS15020 PF00072 Response regulator receiver domain UGYR_RS15020 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS15030 PF00483 Nucleotidyl transferase UGYR_RS15040 PF00535 Glycosyl transferase family 2 UGYR_RS15040 PF07238 PilZ domain UGYR_RS15040 PF03552 Cellulose synthase UGYR_RS15060 PF02837 Glycosyl hydrolases family 2, sugar binding domain UGYR_RS15060 PF16355 Domain of unknown function (DUF4982) UGYR_RS15060 PF00703 Glycosyl hydrolases family 2 UGYR_RS15060 PF02836 Glycosyl hydrolases family 2, TIM barrel domain UGYR_RS15065 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS15065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS15065 PF00672 HAMP domain UGYR_RS15065 PF01627 Hpt domain UGYR_RS15065 PF00072 Response regulator receiver domain UGYR_RS15065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UGYR_RS15070 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS15070 PF00072 Response regulator receiver domain UGYR_RS15075 PF00440 Bacterial regulatory proteins, tetR family UGYR_RS15100 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS15105 PF00313 'Cold-shock' DNA-binding domain UGYR_RS15110 PF00313 'Cold-shock' DNA-binding domain UGYR_RS15115 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UGYR_RS15125 PF00990 Diguanylate cyclase, GGDEF domain UGYR_RS15125 PF05230 MASE2 domain UGYR_RS15130 PF02416 mttA/Hcf106 family UGYR_RS15135 PF04055 Radical SAM superfamily UGYR_RS15135 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family UGYR_RS15140 PF03099 Biotin/lipoate A/B protein ligase family UGYR_RS15145 PF04359 Protein of unknown function (DUF493) UGYR_RS15150 PF00768 D-alanyl-D-alanine carboxypeptidase UGYR_RS15150 PF07943 Penicillin-binding protein 5, C-terminal domain UGYR_RS15155 PF03330 Lytic transglycolase UGYR_RS15155 PF05036 Sporulation related domain UGYR_RS15160 PF01098 Cell cycle protein UGYR_RS15165 PF03717 Penicillin-binding Protein dimerisation domain UGYR_RS15165 PF00905 Penicillin binding protein transpeptidase domain UGYR_RS15170 PF02590 Predicted SPOUT methyltransferase UGYR_RS15180 PF01467 Cytidylyltransferase-like UGYR_RS15185 PF14840 Processivity clamp loader gamma complex DNA pol III C-term UGYR_RS15185 PF06144 DNA polymerase III, delta subunit UGYR_RS15190 PF04390 Lipopolysaccharide-assembly UGYR_RS15195 PF13603 Leucyl-tRNA synthetase, Domain 2 UGYR_RS15195 PF08264 Anticodon-binding domain of tRNA UGYR_RS15195 PF00133 tRNA synthetases class I (I, L, M and V) UGYR_RS15200 PF07295 Zinc-ribbon containing domain UGYR_RS15205 PF00005 ABC transporter UGYR_RS15210 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15215 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15220 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS15230 PF00795 Carbon-nitrogen hydrolase UGYR_RS15235 PF03471 Transporter associated domain UGYR_RS15235 PF00571 CBS domain UGYR_RS15240 PF02130 Uncharacterized protein family UPF0054 UGYR_RS15245 PF02562 PhoH-like protein UGYR_RS15250 PF01938 TRAM domain UGYR_RS15250 PF04055 Radical SAM superfamily UGYR_RS15250 PF00919 Uncharacterized protein family UPF0004 UGYR_RS15255 PF01494 FAD binding domain UGYR_RS15290 PF13537 Glutamine amidotransferase domain UGYR_RS15290 PF00733 Asparagine synthase UGYR_RS15295 PF13344 Haloacid dehalogenase-like hydrolase UGYR_RS15300 PF01047 MarR family UGYR_RS15300 PF00480 ROK family UGYR_RS15305 PF01979 Amidohydrolase family UGYR_RS15310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UGYR_RS15315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UGYR_RS15315 PF00367 phosphotransferase system, EIIB UGYR_RS15315 PF02378 Phosphotransferase system, EIIC UGYR_RS15320 PF00749 tRNA synthetases class I (E and Q), catalytic domain UGYR_RS15320 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain UGYR_RS15325 PF03573 outer membrane porin, OprD family UGYR_RS15330 PF13982 YbfN-like lipoprotein UGYR_RS15335 PF00728 Glycosyl hydrolase family 20, catalytic domain UGYR_RS15335 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain UGYR_RS15335 PF03173 Putative carbohydrate binding domain UGYR_RS15335 PF02838 Glycosyl hydrolase family 20, domain 2 UGYR_RS15340 PF01475 Ferric uptake regulator family UGYR_RS15345 PF00258 Flavodoxin UGYR_RS15350 PF02203 Tar ligand binding domain homologue UGYR_RS15350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UGYR_RS15350 PF00672 HAMP domain UGYR_RS15355 PF01402 Ribbon-helix-helix protein, copG family UGYR_RS15360 PF12697 Alpha/beta hydrolase family UGYR_RS15365 PF17206 SeqA protein N-terminal domain UGYR_RS15365 PF03925 SeqA protein C-terminal domain UGYR_RS15370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UGYR_RS15370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UGYR_RS15370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UGYR_RS15370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UGYR_RS15380 PF00486 Transcriptional regulatory protein, C terminal UGYR_RS15380 PF00072 Response regulator receiver domain UGYR_RS15385 PF13493 Domain of unknown function (DUF4118) UGYR_RS15385 PF13492 GAF domain UGYR_RS15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS15385 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS15385 PF02702 Osmosensitive K+ channel His kinase sensor domain UGYR_RS15390 PF02669 K+-transporting ATPase, c chain UGYR_RS15400 PF03814 Potassium-transporting ATPase A subunit UGYR_RS15405 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) UGYR_RS15410 PF10725 Protein of unknown function (DUF2517) UGYR_RS15415 PF08349 Protein of unknown function (DUF1722) UGYR_RS15420 PF00875 DNA photolyase UGYR_RS15420 PF03441 FAD binding domain of DNA photolyase UGYR_RS15425 PF02112 cAMP phosphodiesterases class-II UGYR_RS15430 PF01784 NIF3 (NGG1p interacting factor 3) UGYR_RS15435 PF02682 Carboxyltransferase domain, subdomain C and D UGYR_RS15440 PF02626 Carboxyltransferase domain, subdomain A and B UGYR_RS15445 PF03746 LamB/YcsF family UGYR_RS15460 PF01470 Pyroglutamyl peptidase UGYR_RS15470 PF00285 Citrate synthase, C-terminal domain UGYR_RS15475 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UGYR_RS15480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UGYR_RS15485 PF00890 FAD binding domain UGYR_RS15485 PF02910 Fumarate reductase flavoprotein C-term UGYR_RS15490 PF13085 2Fe-2S iron-sulfur cluster binding domain UGYR_RS15495 PF00676 Dehydrogenase E1 component UGYR_RS15495 PF02779 Transketolase, pyrimidine binding domain UGYR_RS15495 PF16078 2-oxoglutarate dehydrogenase N-terminus UGYR_RS15495 PF16870 2-oxoglutarate dehydrogenase C-terminal UGYR_RS15500 PF02817 e3 binding domain UGYR_RS15500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UGYR_RS15500 PF00364 Biotin-requiring enzyme UGYR_RS15505 PF08442 ATP-grasp domain UGYR_RS15505 PF00549 CoA-ligase UGYR_RS15510 PF02629 CoA binding domain UGYR_RS15510 PF00549 CoA-ligase UGYR_RS15515 PF02872 5'-nucleotidase, C-terminal domain UGYR_RS15515 PF00149 Calcineurin-like phosphoesterase UGYR_RS15520 PF01654 Cytochrome bd terminal oxidase subunit I UGYR_RS15525 PF02322 Cytochrome bd terminal oxidase subunit II UGYR_RS15530 PF08173 Membrane bound YbgT-like protein UGYR_RS15535 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) UGYR_RS15540 PF03061 Thioesterase superfamily UGYR_RS15545 PF01618 MotA/TolQ/ExbB proton channel family UGYR_RS15550 PF02472 Biopolymer transport protein ExbD/TolR UGYR_RS15555 PF06519 TolA C-terminal UGYR_RS15555 PF06519 TolA C-terminal UGYR_RS15560 PF04052 TolB amino-terminal domain UGYR_RS15560 PF07676 WD40-like Beta Propeller Repeat UGYR_RS15565 PF00691 OmpA family UGYR_RS15570 PF16331 TolA binding protein trimerisation UGYR_RS15570 PF13174 Tetratricopeptide repeat UGYR_RS15595 PF02445 Quinolinate synthetase A protein UGYR_RS15600 PF04973 Nicotinamide mononucleotide transporter UGYR_RS15605 PF01627 Hpt domain UGYR_RS15605 PF00072 Response regulator receiver domain UGYR_RS15605 PF00989 PAS fold UGYR_RS15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UGYR_RS15605 PF00512 His Kinase A (phospho-acceptor) domain UGYR_RS15605 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS15610 PF00072 Response regulator receiver domain UGYR_RS15610 PF00196 Bacterial regulatory proteins, luxR family UGYR_RS15615 PF00793 DAHP synthetase I family UGYR_RS15620 PF00300 Histidine phosphatase superfamily (branch 1) UGYR_RS15630 PF01263 Aldose 1-epimerase UGYR_RS15635 PF08544 GHMP kinases C terminal UGYR_RS15635 PF10509 Galactokinase galactose-binding signature UGYR_RS15635 PF00288 GHMP kinases N terminal domain UGYR_RS15640 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain UGYR_RS15640 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain UGYR_RS15645 PF16363 GDP-mannose 4,6 dehydratase UGYR_RS15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS15655 PF03459 TOBE domain UGYR_RS15670 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15675 PF03459 TOBE domain UGYR_RS15675 PF00005 ABC transporter UGYR_RS15685 PF10282 Lactonase, 7-bladed beta-propeller UGYR_RS15690 PF00202 Aminotransferase class-III UGYR_RS15695 PF06968 Biotin and Thiamin Synthesis associated domain UGYR_RS15695 PF04055 Radical SAM superfamily UGYR_RS15700 PF00155 Aminotransferase class I and II UGYR_RS15705 PF08241 Methyltransferase domain UGYR_RS15715 PF00005 ABC transporter UGYR_RS15720 PF04851 Type III restriction enzyme, res subunit UGYR_RS15720 PF02151 UvrB/uvrC motif UGYR_RS15720 PF17757 UvrB interaction domain UGYR_RS15720 PF12344 Ultra-violet resistance protein B UGYR_RS15720 PF00271 Helicase conserved C-terminal domain UGYR_RS15725 PF09905 DNA-binding protein VF530 UGYR_RS15740 PF01032 FecCD transport family UGYR_RS15745 PF00005 ABC transporter UGYR_RS15750 PF01933 Uncharacterised protein family UPF0052 UGYR_RS15755 PF06463 Molybdenum Cofactor Synthesis C UGYR_RS15755 PF04055 Radical SAM superfamily UGYR_RS15760 PF01967 MoaC family UGYR_RS15765 PF02597 ThiS family UGYR_RS15770 PF02391 MoaE protein UGYR_RS15775 PF01027 Inhibitor of apoptosis-promoting Bax1 UGYR_RS15790 PF00005 ABC transporter UGYR_RS15795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UGYR_RS15800 PF00440 Bacterial regulatory proteins, tetR family UGYR_RS15800 PF09209 Tetracyclin repressor-like, C-terminal domain UGYR_RS15805 PF00270 DEAD/DEAH box helicase UGYR_RS15805 PF00271 Helicase conserved C-terminal domain UGYR_RS15810 PF01207 Dihydrouridine synthase (Dus) UGYR_RS15820 PF00768 D-alanyl-D-alanine carboxypeptidase UGYR_RS15825 PF09330 D-lactate dehydrogenase, membrane binding UGYR_RS15825 PF01565 FAD binding domain UGYR_RS15830 PF01928 CYTH domain UGYR_RS15835 PF01844 HNH endonuclease UGYR_RS15845 PF04226 Transglycosylase associated protein UGYR_RS15850 PF00005 ABC transporter UGYR_RS15860 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15870 PF07308 Protein of unknown function (DUF1456) UGYR_RS15875 PF00581 Rhodanese-like domain UGYR_RS15880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UGYR_RS15885 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15890 PF00005 ABC transporter UGYR_RS15895 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15900 PF13520 Amino acid permease UGYR_RS15905 PF01276 Orn/Lys/Arg decarboxylase, major domain UGYR_RS15905 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UGYR_RS15905 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain UGYR_RS15915 PF00892 EamA-like transporter family UGYR_RS15920 PF00267 Gram-negative porin UGYR_RS15925 PF13307 Helicase C-terminal domain UGYR_RS15925 PF06733 DEAD_2 UGYR_RS15930 PF02885 Glycosyl transferase family, helical bundle domain UGYR_RS15935 PF05971 RNA methyltransferase UGYR_RS15940 PF00005 ABC transporter UGYR_RS15945 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS15950 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS15955 PF00210 Ferritin-like domain UGYR_RS15960 PF13649 Methyltransferase domain UGYR_RS15965 PF00892 EamA-like transporter family UGYR_RS15970 PF13505 Outer membrane protein beta-barrel domain UGYR_RS15975 PF01769 Divalent cation transporter UGYR_RS15975 PF00571 CBS domain UGYR_RS15975 PF03448 MgtE intracellular N domain UGYR_RS15985 PF16916 Dimerisation domain of Zinc Transporter UGYR_RS15985 PF01545 Cation efflux family UGYR_RS15990 PF12848 ABC transporter UGYR_RS15990 PF00005 ABC transporter UGYR_RS15995 PF00899 ThiF family UGYR_RS16000 PF03453 MoeA N-terminal region (domain I and II) UGYR_RS16000 PF03454 MoeA C-terminal region (domain IV) UGYR_RS16000 PF00994 Probable molybdopterin binding domain UGYR_RS16010 PF00756 Putative esterase UGYR_RS16015 PF08240 Alcohol dehydrogenase GroES-like domain UGYR_RS16015 PF00107 Zinc-binding dehydrogenase UGYR_RS16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS16020 PF03466 LysR substrate binding domain UGYR_RS16025 PF06779 Uncharacterised MFS-type transporter YbfB UGYR_RS16030 PF01227 GTP cyclohydrolase I UGYR_RS16035 PF04235 Protein of unknown function (DUF418) UGYR_RS16040 PF00356 Bacterial regulatory proteins, lacI family UGYR_RS16045 PF13407 Periplasmic binding protein domain UGYR_RS16050 PF00005 ABC transporter UGYR_RS16055 PF02653 Branched-chain amino acid transport system / permease component UGYR_RS16060 PF02698 DUF218 domain UGYR_RS16065 PF00390 Malic enzyme, N-terminal domain UGYR_RS16065 PF03949 Malic enzyme, NAD binding domain UGYR_RS16075 PF03466 LysR substrate binding domain UGYR_RS16075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UGYR_RS16080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UGYR_RS16080 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region UGYR_RS16085 PF04172 LrgB-like family UGYR_RS16090 PF03788 LrgA family UGYR_RS16100 PF01588 Putative tRNA binding domain UGYR_RS16100 PF09334 tRNA synthetases class I (M) UGYR_RS16105 PF10609 NUBPL iron-transfer P-loop NTPase UGYR_RS16110 PF00485 Phosphoribulokinase / Uridine kinase family UGYR_RS16115 PF00692 dUTPase UGYR_RS16120 PF05170 AsmA family UGYR_RS16125 PF03606 C4-dicarboxylate anaerobic carrier UGYR_RS16130 PF00571 CBS domain UGYR_RS16130 PF03471 Transporter associated domain UGYR_RS16130 PF03741 Integral membrane protein TerC family UGYR_RS16135 PF00483 Nucleotidyl transferase UGYR_RS16140 PF00483 Nucleotidyl transferase UGYR_RS16145 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain UGYR_RS16145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UGYR_RS16150 PF01502 Phosphoribosyl-AMP cyclohydrolase UGYR_RS16150 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UGYR_RS16155 PF00977 Histidine biosynthesis protein UGYR_RS16160 PF00977 Histidine biosynthesis protein UGYR_RS16165 PF00117 Glutamine amidotransferase class-I UGYR_RS16170 PF00475 Imidazoleglycerol-phosphate dehydratase UGYR_RS16175 PF00155 Aminotransferase class I and II UGYR_RS16180 PF00815 Histidinol dehydrogenase UGYR_RS16185 PF01634 ATP phosphoribosyltransferase UGYR_RS16185 PF08029 HisG, C-terminal domain UGYR_RS16190 PF01370 NAD dependent epimerase/dehydratase family UGYR_RS16195 PF00043 Glutathione S-transferase, C-terminal domain UGYR_RS16195 PF13417 Glutathione S-transferase, N-terminal domain UGYR_RS16210 PF01053 Cys/Met metabolism PLP-dependent enzyme UGYR_RS16215 PF00571 CBS domain UGYR_RS16215 PF00291 Pyridoxal-phosphate dependent enzyme UGYR_RS16220 PF07943 Penicillin-binding protein 5, C-terminal domain UGYR_RS16220 PF00768 D-alanyl-D-alanine carboxypeptidase UGYR_RS16225 PF03313 Serine dehydratase alpha chain UGYR_RS16225 PF03315 Serine dehydratase beta chain UGYR_RS16235 PF00455 DeoR C terminal sensor domain UGYR_RS16235 PF08220 DeoR-like helix-turn-helix domain UGYR_RS16240 PF01791 DeoC/LacD family aldolase UGYR_RS16245 PF01569 PAP2 superfamily UGYR_RS16255 PF02080 TrkA-C domain UGYR_RS16255 PF06826 Predicted Permease Membrane Region UGYR_RS16260 PF00462 Glutaredoxin UGYR_RS16265 PF07214 Protein of unknown function (DUF1418) UGYR_RS16270 PF10722 Putative bacterial sensory transduction regulator UGYR_RS16275 PF13416 Bacterial extracellular solute-binding protein UGYR_RS16280 PF08402 TOBE domain UGYR_RS16280 PF00005 ABC transporter UGYR_RS16285 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS16290 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS16295 PF10767 Protein of unknown function (DUF2593) UGYR_RS16300 PF05958 tRNA (Uracil-5-)-methyltransferase UGYR_RS16305 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS16310 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS16315 PF00528 Binding-protein-dependent transport system inner membrane component UGYR_RS16320 PF00497 Bacterial extracellular solute-binding proteins, family 3 UGYR_RS16325 PF00005 ABC transporter UGYR_RS16330 PF12883 Protein of unknown function (DUF3828) UGYR_RS16335 PF01906 Putative heavy-metal-binding UGYR_RS16340 PF01370 NAD dependent epimerase/dehydratase family UGYR_RS16345 PF11066 Protein of unknown function (DUF2867) UGYR_RS16345 PF13460 NAD(P)H-binding UGYR_RS16350 PF01212 Beta-eliminating lyase UGYR_RS16355 PF00111 2Fe-2S iron-sulfur cluster binding domain UGYR_RS16355 PF00970 Oxidoreductase FAD-binding domain UGYR_RS16355 PF00175 Oxidoreductase NAD-binding domain UGYR_RS16360 PF03063 Prismane/CO dehydrogenase family UGYR_RS16365 PF03956 Lysine exporter LysO UGYR_RS16370 PF11398 Protein of unknown function (DUF2813) UGYR_RS16375 PF04393 Protein of unknown function (DUF535) UGYR_RS16380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UGYR_RS16385 PF02687 FtsX-like permease family UGYR_RS16385 PF00005 ABC transporter UGYR_RS16385 PF12704 MacB-like periplasmic core domain UGYR_RS16390 PF00313 'Cold-shock' DNA-binding domain UGYR_RS16395 PF02617 ATP-dependent Clp protease adaptor protein ClpS UGYR_RS16400 PF10431 C-terminal, D2-small domain, of ClpB protein UGYR_RS16400 PF07724 AAA domain (Cdc48 subfamily) UGYR_RS16400 PF17871 AAA lid domain UGYR_RS16400 PF02861 Clp amino terminal domain, pathogenicity island component UGYR_RS16400 PF00004 ATPase family associated with various cellular activities (AAA) UGYR_RS16405 PF01176 Translation initiation factor 1A / IF-1 UGYR_RS16410 PF03588 Leucyl/phenylalanyl-tRNA protein transferase UGYR_RS16415 PF00664 ABC transporter transmembrane region UGYR_RS16415 PF00005 ABC transporter UGYR_RS16420 PF00664 ABC transporter transmembrane region UGYR_RS16420 PF00005 ABC transporter UGYR_RS16425 PF07992 Pyridine nucleotide-disulphide oxidoreductase UGYR_RS16430 PF01037 Lrp/AsnC ligand binding domain UGYR_RS16435 PF01580 FtsK/SpoIIIE family UGYR_RS16435 PF09397 Ftsk gamma domain UGYR_RS16435 PF17854 FtsK alpha domain UGYR_RS16435 PF13491 4TM region of DNA translocase FtsK/SpoIIIE UGYR_RS16440 PF03548 Outer membrane lipoprotein carrier protein LolA UGYR_RS16445 PF16193 AAA C-terminal domain UGYR_RS16445 PF00004 ATPase family associated with various cellular activities (AAA) UGYR_RS16445 PF12002 MgsA AAA+ ATPase C terminal UGYR_RS16450 PF02403 Seryl-tRNA synthetase N-terminal domain UGYR_RS16450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UGYR_RS16455 PF07690 Major Facilitator Superfamily UGYR_RS16460 PF04055 Radical SAM superfamily UGYR_RS16465 PF02901 Pyruvate formate lyase-like UGYR_RS16465 PF01228 Glycine radical UGYR_RS16470 PF01226 Formate/nitrite transporter UGYR_RS16475 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding UGYR_RS16475 PF18381 YcaO cyclodehydratase C-terminal domain UGYR_RS16480 PF00710 Asparaginase, N-terminal UGYR_RS16480 PF17763 Glutaminase/Asparaginase C-terminal domain UGYR_RS16485 PF00266 Aminotransferase class-V UGYR_RS16490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UGYR_RS16495 PF02224 Cytidylate kinase UGYR_RS16500 PF00575 S1 RNA binding domain UGYR_RS16505 PF00216 Bacterial DNA-binding protein UGYR_RS16510 PF00753 Metallo-beta-lactamase superfamily UGYR_RS16510 PF03772 Competence protein UGYR_RS16515 PF00664 ABC transporter transmembrane region UGYR_RS16515 PF00005 ABC transporter UGYR_RS16520 PF02606 Tetraacyldisaccharide-1-P 4'-kinase UGYR_RS16525 PF07063 Domain of unknown function (DUF1338) UGYR_RS16530 PF00313 'Cold-shock' DNA-binding domain UGYR_RS16535 PF00313 'Cold-shock' DNA-binding domain UGYR_RS16540 PF03966 Trm112p-like protein UGYR_RS16545 PF02348 Cytidylyltransferase UGYR_RS16550 PF01636 Phosphotransferase enzyme family UGYR_RS16555 PF02698 DUF218 domain UGYR_RS16560 PF13847 Methyltransferase domain UGYR_RS16565 PF03882 MukF winged-helix domain UGYR_RS16565 PF17193 MukF C-terminal domain UGYR_RS16565 PF17192 MukF middle domain UGYR_RS16570 PF04288 MukE-like family UGYR_RS16575 PF04310 MukB N-terminal UGYR_RS16575 PF16330 MukB hinge domain UGYR_RS16580 PF01471 Putative peptidoglycan binding domain UGYR_RS16580 PF03734 L,D-transpeptidase catalytic domain UGYR_RS16585 PF05951 Bacterial protein of unknown function (DUF882) UGYR_RS16590 PF00753 Metallo-beta-lactamase superfamily UGYR_RS16595 PF00155 Aminotransferase class I and II UGYR_RS16600 PF00267 Gram-negative porin UGYR_RS16605 PF01336 OB-fold nucleic acid binding domain UGYR_RS16605 PF00152 tRNA synthetases class II (D, K and N) UGYR_RS16625 PF00486 Transcriptional regulatory protein, C terminal