        metJ    3933 ..    3947 + -11.4   -4.8048   ACAGACATGAAAAAA               GGTGCC AAA GGCACC               TTTTTCGTCTGACGG 100 237
CLC90_RS00025    6790 ..    6800 +  -3.2  -3.60627   TGTCACCGCATCGTT                 CGGA ATA TCTG                 TTTAACCTGCGATAA  51 231
        cytR NONE
CLC90_RS17265 NONE
        ftsN    8903 ..    8937 + -18.1  -2.77182   TTATAACTTCAATAT    G-CCCCGTCTTGTGTT GAAC AACACAAGACGGGGAC     TCATTCCGTCTGCAA 100 62
        hslV NONE
        hslU   10874 ..   10896 +  -9.1  -4.82901   CTATGATCAATAAAA           GTAGGAGGC ATCTC GCCTCCCAC           TTTTTGTCGCCAGCA 100 60
CLC90_RS00050 NONE
        rraA NONE
CLC90_RS17280   12512 ..   12531 + -12.2  -4.35116   CGAACCACGTAGAAA            GGGCGATA TTGA TATCGCCC             TTTTGCTATGACATC 100 15
CLC90_RS00070 NONE
CLC90_RS17290 NONE
CLC90_RS17295 NONE
CLC90_RS17300 NONE
        glpK NONE
CLC90_RS17305 NONE
        glpX NONE
CLC90_RS17310   17412 ..   17422 +  -4.6  -3.05384   TAAACAAAATACTGA                 CGGT CAT GCCG                 TTCAATCCCAACACC  49 487
CLC90_RS00090 NONE
CLC90_RS17320 NONE
CLC90_RS17325 NONE
CLC90_RS00100 NONE
CLC90_RS17330 NONE
        pilP NONE
CLC90_RS00105   21403 ..   21416 +  -9.5  -5.26316   CGTAACACGCAAAAA               CCCCG GCAA CGGGG                TTTTTTATGGCCTAA 100 54
CLC90_RS17345   23829 ..   23841 +  -6.2  -3.65351   ATTACATTTCCCAAT                GCGC ATGAC GCGC                TTTCGGTACCACTGA  63 9
CLC90_RS17350   24473 ..   24486 +  -2.3  -3.59979   CTTTGTGCCAATGCG               GCCAA AGAC TCGGC                TTTACCGTGGCCAAA  49 22
CLC90_RS17355 NONE
CLC90_RS17360 NONE
        cpxR NONE
        pilV NONE
        cpxA NONE
CLC90_RS17370 NONE
        trmL NONE
CLC90_RS17375 NONE
        traJ NONE
CLC90_RS17385   30206 ..   30219 +  -3.1  -2.77899   CACCTTCGCCTTCAG               TTTGC TGTT GCAGA                TAGTTCATGAACAGG  43 12
CLC90_RS00170 NONE
CLC90_RS17390 NONE
        envC NONE
CLC90_RS17400 NONE
CLC90_RS00180 NONE
CLC90_RS17405 NONE
CLC90_RS17410 NONE
CLC90_RS17415 NONE
CLC90_RS17420 NONE
CLC90_RS17425 NONE
CLC90_RS00195 NONE
CLC90_RS17430 NONE
        rfaF NONE
        rfaC NONE
CLC90_RS17435 NONE
CLC90_RS00210 NONE
CLC90_RS00215 NONE
CLC90_RS17440 NONE
CLC90_RS00220 NONE
CLC90_RS17445 NONE
CLC90_RS17450 NONE
CLC90_RS17455 NONE
CLC90_RS17460 NONE
       coaBC NONE
CLC90_RS00255 NONE
        slmA   49302 ..   49328 + -14.5  -3.79071   ACGTCCTTGTCGGCT        CGTTCCGCGCCA TCCC TGGCGCGGA-CG         TTTGACTCTTCTACC 100 142
CLC90_RS17470   50358 ..   50370 +  -4.1  -3.04792   CACGTTCATATCGGT                TTCTG CTG CGGAA                TCTTCCACATACTCC  47 10
CLC90_RS00275 NONE
CLC90_RS17475   52722 ..   52733 +  -2.2  -2.79327   AGGAACAACACTCCC                TACC ACCG GGTG                 CTTTAAATCAGATAA  41 63
CLC90_RS17480 NONE
CLC90_RS00285   53971 ..   53983 +  -2.7  -3.78022   AGATAGAGGTTTGAT                GATGA ACT TTATC                TTTCATGCCTATCCC  52 27
CLC90_RS00290   56573 ..   56597 +  -4.2  -4.64676   CCCCACTCCATATAA          GCTGCTCTGC AACTC GCATACCAGC          TTTTCTTGCCACTAA  68 341
CLC90_RS00300   58722 ..   58753 + -17.5  -3.65046   ATGCTTTAGGTGGAA      GTTAGGCTCTTGG ATCACG CCAAGAGCCTAAC       TTCTTAAACTAAAAA 100 32
CLC90_RS00310 NONE
CLC90_RS17505   60912 ..   60925 +  -6.7  -3.84017   CTTTATCGGACTAAG               GTGCA AAAC TGCAC                TTATCTTTCCCGTTC  67 238
CLC90_RS00320   62839 ..   62854 +  -3.3  -2.78816   CAAATTATTGGCAGA              CTGAA CAGAGT TTCAG               TATCATGCCCAGTCA  43 22
CLC90_RS00325   63184 ..   63194 +  -5.4  -2.61374   TTAATTTAGTCACTA                 GACT GTG AGTC                 TGCCTTGTACCTGTT  49 37
CLC90_RS17525 NONE
CLC90_RS00330 NONE
        trmH NONE
        recG   68086 ..   68121 +  -3.4  -2.62026   CCAACGCTTAAAAAA   C-GATA-GGGAAAGCC TAGACT GGCTTTCCCTTAACCG    ATTGATGTTAACCTG  42 30
CLC90_RS00350   71015 ..   71039 +  -9.2  -5.48063   GTATCAACACTCAAT          GGCTGGCGCT TTCTT GGCTCCAGCC          TTTTTTATCTTCGAT 100 54
CLC90_RS17595 NONE
CLC90_RS00355 NONE
CLC90_RS17600   73473 ..   73492 +  -3.4  -2.62983   CAGAAAGTGGCGCAC            CGGCGTAG TTTG CGGTGCCG             TAATCTCCCCCTGGC  42 431
CLC90_RS17610 NONE
CLC90_RS17615   76923 ..   76935 +  -3.4   -3.6761   AACACGCAATGCCAC                GTTG TGGAT CAAC                TCTTTGTTCAGACGG  53 265
CLC90_RS17625 NONE
CLC90_RS17630 NONE
CLC90_RS17640 NONE
CLC90_RS00385   79881 ..   79898 + -11.3  -5.26316   CCGTGGAAACTTTTG             GCCCATC TTAC GATGGGC              TTTTTTCTCCACTGA 100 135
CLC90_RS00390 NONE
CLC90_RS00395 NONE
CLC90_RS00415   86004 ..   86030 + -11.7   -2.6127   GCAGGCACTTTTCTA         TGGGCGATAAC ATCAG GTTATCGTCCA         GTATCTTTACTTCTA  80 59
        mobA NONE
CLC90_RS00445   93253 ..   93274 + -12.9  -3.81089   CTGAAAACGCCAAAA           GCCCCCGGC GCAA GCAGGGGGC            TTCTTCATCTCTGTC 100 181
CLC90_RS00470  100330 ..  100351 +  -9.5  -3.07256   TGGTAAAGACCGCTT           CTGGCGGTTG TGG CAA-CGCCAG           TAATTGTTTCATTGC  69 473
        ravA NONE
        viaA  111572 ..  111589 +  -9.1  -3.09635   ATAAAAAAGAAACAA             CCCGACG ATGA TGTCGGG              TTGCCTGATAAAACT  69 296
        asnC NONE
        mioC  114030 ..  114049 +  -5.1  -4.32402   AAGATCTAATAAAGA            GATCTTT AAATAA AAAGATC             TTCTTTTAATTAAGG  68 275
        mnmG  116089 ..  116111 + -10.6  -3.20236   TTTGGTTCCCCGCTG           ACAGCCAACT GAT AGTTGGCTGA           TTAACTATTCGATTA  77 62
        rsmG  117069 ..  117083 +  -2.2  -4.10188   GGTAGATAAGTTGTT               TTAGAA AGG TTTTAA               TTTAATATTTTGATT  55 303
CLC90_RS00555 NONE
CLC90_RS00560 NONE
CLC90_RS00565  118975 ..  118985 +  -5.4  -2.63596   GCTGTCGCGTAAGTA                 GAGA TTT TCTC                 TACTGTGAACTACAC  49 29
CLC90_RS00570 NONE
CLC90_RS00575 NONE
        atpA NONE
CLC90_RS00585  122514 ..  122532 +  -4.5  -2.72263   GGAACTCACCGAGAT            CGTCGGGG GAGC CTCCG-CG             GTTTAACCAGGCTAT  48 1
        atpD NONE
CLC90_RS00595  124572 ..  124597 + -10.5  -5.64321   TATAGAGTAATAAGG         TGCCAGTTAGT GAAA GCTGACTGGCA          TTTTTCTTTTCTTCT 100 76
        glmU  126463 ..  126491 + -13.3  -2.84218   AAAATCTGATTGATA        TCCTTTCATGGTG TCA TGCCATGAAAGGA        ATGTTTTGCTCGGTG  93 32
        glmS  128537 ..  128562 +  -7.7  -5.88471   ATATTGCGCTAAAAA         TAGTCCGTTAT GAAA ATAATGGGCTA          TTTTTTTTAATGGTA 100 79
        pstS NONE
        pstC NONE
        pstA  131882 ..  131897 +  -6.8  -3.05384   CCAAATTCAAAAAAG              CGTAGC TTAG GCTGCG               TTGGCTAAAAGAGAG  58 49
        pstB  132744 ..  132756 +  -5.5  -4.55128   CTGTAGATTTGCCTG                GCTGA AAG TCGGC                TTTTGGTTTAGGCAT  70 72
        phoU  133568 ..  133586 +  -8.8  -4.66609   AAAATAATTTCTAAT             GCCCGG TTTTTTT CCGGGC             TTTTTCCCTCCGCTC 100 34
CLC90_RS00635  134628 ..  134654 + -10.9  -3.81557   CTTAAACGGTTAAAA         CCCCTGCATTG CCAGC CAATGTGGGGG         TGTTTGTTTGAAGGA  88 62
CLC90_RS00640 NONE
CLC90_RS00645  136376 ..  136390 +  -4.2  -3.44325   CGCTTTGAGTTTAAT               GACTGA AAT TCAGAC               TTGATTGTCAGGCAT  52 161
CLC90_RS00650  137902 ..  137932 + -19.8  -4.54727   GCCTAATGGTCATCA       CGGCCACCGCATCG ACC TGATGTGGTGGCCG       TTTTCCTTTCCAGGC 100 54
CLC90_RS00655  140014 ..  140035 +  -8.8   -5.4756   GTAATTTGTTTTAAA           TCCCTTCT CTAAAC AGAAGGGA            TTTTTTATTGCCGTT 100 55
CLC90_RS00660  141159 ..  141191 + -10.8  -2.55484   ATAAATAAATAGTTA      ATCTTGGCTTTTAT CATGA ATAAAAGCCAAGAG      ATATTCTGGGTACTT  76 33
CLC90_RS00665 NONE
CLC90_RS00670  144458 ..  144471 +  -2.5  -2.79158   AGAGAATTGTCACGA               TTAAA AGGA TTTAA                GTATGTTTTTGTTAG  42 22
CLC90_RS00675  145549 ..  145566 + -12.7  -2.68434   TTTTTATGCTGTGTA             GCGCCTC AAGT GAGGCGC              TAATATGATGTAAAA  88 174
        dnaA NONE
CLC90_RS00715 NONE
        recF NONE
        gyrB  156359 ..  156381 +  -9.9  -5.76633   TTTGCGTGAAAAAAA          CCGGAG-CAG GTGA CTGTCTCCGG           TTTTTTTATGTCTAA 100 44
CLC90_RS00730  157424 ..  157443 +  -8.6  -2.92157   ATATAGATTTAAAGC            GT-GCTGGC GGA GCCAGCGAC            TCTGTGAGGTTAATG  65 45
CLC90_RS00735  158804 ..  158825 +  -9.5  -2.70528   TATTTACGGTTGAAG           CCGGTTAGT GATG ATTAACCGG            TAATCTCTGGATAAT  68 18
        ibpA  159964 ..  159988 +  -2.9  -2.87564   TTATTATTTAATATT         TTGGCTTGCC GTAATA GG-GAGCCAA          TCTGTCACGGGCTAA  42 68
        ibpB  160627 ..  160655 + -12.6  -3.31175   CAATAATTGTCTTTC       GCGCCAGA-AACA TTCC TGTTCTCTGGCGC        ATTTTGTGGTGTATC  95 108
CLC90_RS00755  162465 ..  162487 + -10.6  -4.37886   GCTAAAAATAAAAAA           GGACAACGGG AGA TCTGTTGTCC           TTTTCTCGAGAATAA 100 58
CLC90_RS00790  172098 ..  172140 +  -2.7  -4.71418   TACCTAAATAAGGTC GCTGAACAGGCCTTGTC AGCAAACAA GATGAGGTAAGTTCAGC TTTATTTTACATATT  64 101
        glyQ NONE
CLC90_RS00800  175338 ..  175367 +  -7.2  -3.60112   CCAGTTTTCGGCCAA       G-GCAAAGGGGGA TAAAT TACCCCTTTGCAC       TATTCTTATTGATTC  68 42
CLC90_RS00805  176324 ..  176342 +  -3.1   -4.7497   TTGTCCAGATAAGAT             CTGTGCC GAATA GGTATAG             TTTTTGGTGACTAAA  68 185
CLC90_RS00835 NONE
CLC90_RS00840  185504 ..  185525 +  -7.9  -2.54896   TACCTACTTTTTTAC           TCTCCCGGC ATGA GTCGGGAGC            TGAATTCCGTGGCGG  60 60
CLC90_RS00845  186608 ..  186628 +  -2.5  -2.76009   CATCCTGATACACTA            TAGGTGATA TCC TATCCCCAA            CTTTAGCGAATTTTC  42 314
CLC90_RS00850  187057 ..  187084 +  -7.8  -5.95449   GCGGTAAAACAGAAA        CCGGGTTGATG CTAGTGC CATCA-CCCGG        TTTTTTCTTTTCTTT 100 50
CLC90_RS00875 NONE
        fdnG NONE
        fdxH NONE
CLC90_RS00890 NONE
        fdhE  197678 ..  197694 +    -3  -3.32536   TCCATTCCTGTTCCC             TGGCGAG TAAC CTC-CCA              TTATCAGCCTGATTT  47 16
CLC90_RS00900  199082 ..  199092 +  -6.8  -3.00353   TGACGAAGACGCATT                 GCTC AGG GAGC                 TAGTTTCATGATTAT  58 4
        selB  200973 ..  200983 +  -3.2  -2.91264   TCAGTTAACTGTTTG                 CCTG CGT TAGG                 TATATCCATAGCAAG  44 33
CLC90_RS00910 NONE
CLC90_RS00920  204844 ..  204864 +  -5.5  -4.64766   TTGTGTATAGTAAAG            GGTATAG AATTACC CTATACC            TTTTTGAGCTATACA  73 425
CLC90_RS00925 NONE
CLC90_RS00930  207787 ..  207805 +  -4.5  -3.64703   ATAAATAGCGGCTGG             CACGCGT ATGAG ACGCATG             TTTACATACCGGACA  57 501
CLC90_RS00945  208642 ..  208655 +  -4.5  -3.73534   ATTTCTGGCATACTA               CGTTG ATTA CAGCG                TTGTTAGTCAGATTA  57 71
CLC90_RS00950  209996 ..  210013 +  -3.5  -4.29187   GTATTGAAGAAGGTA             TGACATT CGAA AATGTTA              TCTTTTTTAGTTATC  63 309
CLC90_RS00955  212463 ..  212482 +  -9.3  -5.86061   TCCATTCGTAAAAAA            GCGGCAA TTTTAT TTGCCGC             TTTTTTTTGATGAAG 100 80
        hutU NONE
        hutH  216144 ..  216170 +  -9.4  -2.87344   AATAACAGACTATAT         GGGTGATTCCGT TGT GTGGCATCACCC         TCTCTGCCCCCCCTG  70 44
CLC90_RS00970  217627 ..  217671 + -12.3  -2.99097   AAAAGCTTATCGCAA TAGGTATCCAGCAGGTGGT CAGCGCT ACTGCCTGCTGGGTGTCTA TGTAATATTATTATT  93 39
CLC90_RS00980  220207 ..  220220 +  -2.3  -6.02914   GTCATTCACCTCAGC               CTCCT TTTC AGGCG                TTTTTTTTATGTAGA  90 223
CLC90_RS00985  222195 ..  222206 +  -5.8  -2.83964   TCCGGTTTCCTCTCC                GCAG TTTA CTGC                 TGCTGTTGTATACTC  53 76
        uhpA NONE
        uhpB  224391 ..  224407 +  -2.9  -4.15044   TTCCCGATTCATGCA              GGAAAGG TGC CCGTTTC              TTTCTTACGCGCGCG  57 47
CLC90_RS01000 NONE
CLC90_RS01005  226015 ..  226034 +   -10  -5.48825   GACCACATTTAAGAA            CCCTGGCT TTTT AGTCAGGG             TTTTTTTCGATCATC 100 36
CLC90_RS01010  228259 ..  228280 +  -6.5  -3.32727   AACGCCGTTTATGGA           TGAGGGGGC TACG GTACCCTCA            TTGATCTGGTGTTCC  59 47
        dppB NONE
        dppC NONE
CLC90_RS01025 NONE
CLC90_RS01030  232424 ..  232448 +  -8.6  -5.60993   ATAAGAGCTAAAAAA          GCACCGATGA GTTAA TAATCGGTGC          TTTTTTTATAACCCA 100 67
CLC90_RS01050 NONE
        yhjQ NONE
CLC90_RS01060 NONE
        bcsB NONE
CLC90_RS01070 NONE
        bcsC  246841 ..  246854 +  -5.2  -4.61527   TAATGCGGGCTTTAT               CGGC AAATAA GCCG                TTTTTCGGCAATTTT  73 44
        hmsP  249066 ..  249077 +  -4.4  -4.18948   TTTTTCGGTCGAAAA                GAAG TCAC CTTC                 TTTCATTATTTCTCT  61 46
CLC90_RS01085  250688 ..  250714 + -14.5  -3.93695   CAGATAATTAATCAG         CCACCGGTAGC TTGTC GTTACCGGTGG         TTTCTGCATAATGAA 100 58
CLC90_RS01090  252488 ..  252516 + -15.4  -3.76224   CGCACAGTAAATTGA       CTCAATCGGGGCC TTTG GGCCCCGAT-GAG        TTTCCTACGTAAAAC 100 31
CLC90_RS01105  255490 ..  255503 +  -4.5  -3.55444   AGGTTGCCACCTTGG               GCGGA AAGC TTCGC                TTTGAGCGATCAGCG  55 444
CLC90_RS01125 NONE
CLC90_RS01130  261032 ..  261053 + -11.6  -2.80935   TTTATGTATCAAACA           GCCGGAAG AAATAA CTTCCGGC            TGTGATAGATCCCAT  81 73
CLC90_RS01135  262520 ..  262541 +  -2.4   -3.6471   TTTAAAAAATAAAGT           TGAAAATG TCATTT CATTTTTA            TTATATGATTTAGCA  49 279
CLC90_RS01140  265468 ..  265489 + -11.6  -2.80816   TTTTTAATCAACTCA           GCCGGAAG AAATAA CTTCCGGC            TGTGATAGATCCGAC  81 394
CLC90_RS01155 NONE
        rsmJ  271021 ..  271076 + -11.4  -3.09327   TTACCTTAATCGCGA CTTTCTCTAAT-AAACCCCGCTATTCC AGA GGAATAGCGTGAAATGATTAGAGAAAG TGTTCGCTGGGCTGA  84 32
        uspB  274254 ..  274273 + -10.7  -4.41609   TAGCCAACTAAAAAA            GGCGACC CGATAA GGTCGCC             TTTCTATTTGTAGTC 100 60
CLC90_RS01185  277467 ..  277491 + -11.5  -3.73402   GATTGTTGGACAAGT          CATGGCGTC TGATTAT GACGCCATG          TTTACTGGCAGATAT  90 170
CLC90_RS01200  279810 ..  279833 +  -8.2  -6.09888   TTTCTCGGCTAAAAA          GGGTATG-CGC ATC GCGTTATACCC          TTTTTTTTGTTAAAA 100 101
        gntR  280959 ..  280973 +  -3.4  -4.07568   CTGACAAACCTCGCT               CCTGCG ATC TGCCGG               TTTTCACCGCGGCGA  56 105
CLC90_RS01215  283369 ..  283384 +  -7.5  -4.43173   TGTTATTAACCTCAA              GGGCC AATACC GGCCC               TTTTGCATTATTTTT  78 128
         asd  285390 ..  285414 +  -7.1  -4.91712   CGCTCAGAATGATGA          GAGGTTGTCGT GTA GCGGCAACCTG          TTTTTATACGTTGAA  89 63
        glgB NONE
        glgX NONE
        glgC  293057 ..  293086 +  -4.1  -2.66733   AAGCTATAACAACAT       CCTGGGTTGGCGT GAAA ACGGCAGCCCCGA        TCGTGTCGCTTAAAC  45 32
        glgA NONE
CLC90_RS01255  297080 ..  297111 +   -14  -4.15066   TATTCTCTGTCCACT      TAATAAACCCTTTC ATTT GAAAGGGTTTATTG       TTTGGTTTGTCGATG 100 48
CLC90_RS01285 NONE
CLC90_RS01290  308956 ..  308984 + -11.7  -4.23781   CAAGAAAGCATAAAA        AGGGGAGCCGATG GGT TATTGGCTCCCCG        TTTGGTTTTCATCAC 100 81
        bioH  311258 ..  311268 +  -2.4  -2.57211   TCGCCGTTGGGGGAG                 GGGG TAT CCGC                 GTTATCCCCAACGGT  40 48
CLC90_RS01310  311808 ..  311835 + -11.4  -5.40474   ATTTTAGATGACAGA        AAGGTGATGTCA TTGC TGACATCACCTC         TTTTTTTAGCAAAAT 100 44
        greB NONE
        ompR NONE
        envZ  325064 ..  325086 + -13.5  -4.74504   GTTATTAACCGGAAA           GGGCACGAA TAGAT TTCGTGCCC           TTTTTGCATTAGCGT 100 78
        nudE  332264 ..  332287 + -12.4  -3.96624   TAACCGCATAAAAAA          CGGGCCAATC GTTA GACTGGCCCG           TTTCTGATGGCAGTG 100 30
CLC90_RS01405  335843 ..  335854 +  -4.4  -2.95177   TTCGCCCGGTAGATG                CTGA TGTA TCAG                 GTTAATTTTTTGCCG  47 9
CLC90_RS01410 NONE
CLC90_RS01415 NONE
CLC90_RS01420 NONE
        hofQ  338894 ..  338922 +  -4.6  -3.51032   GGTTTCAGTTTAGGT       CCCGCC--GCTGAT TTG ATTGGCGGGGCGGG       TTATCATTAACGAAT  55 308
        aroK  339464 ..  339475 +  -4.4  -2.80939   ACCAGATCATTAACA                TGCT GGAA AGCA                 ATTGATTTTGGCATT  46 9
CLC90_RS01435  340731 ..  340759 +    -6  -4.67011   CAGTCAACTTAATCT       GCCGAATCGTTGC TGAA GCAACGG-TAGGC        TTTTTGCCTCGAGTT  75 118
CLC90_RS01440  341782 ..  341793 +  -3.6  -3.34517   ATCATTCTTATCTGT                GCGC TGAT GTGC                 TGTTTGAAACAGAGT  49 41
CLC90_RS01445 NONE
CLC90_RS01450 NONE
CLC90_RS01455 NONE
        trpS  345187 ..  345211 +  -8.6  -3.53091   CCATTGCCAGCAAAA          CCAGGGAC ATGTATTGC GTCCCTGG          TTTCAGACGGCGGAT  71 69
CLC90_RS01485  352285 ..  352296 +  -7.2  -4.83169   TGCTGTCGCCAGCGC                GGCG TGAA CGCC                 TTTTTCTGCCACGAT  83 181
CLC90_RS01495 NONE
CLC90_RS01500  356303 ..  356330 +   -12  -4.43909   TACGTGCTAAACAGG        GGCGTGGCAGGT TGAA ATCTGCGACGCC         TTATTTTCTTGGGGT 100 52
CLC90_RS01515  359940 ..  359953 +  -3.8  -3.96148   AGTTTTACCTTAATT               GACG AACATC CGTC                TTTGTAATAAGCAGA  58 28
CLC90_RS01520  360881 ..  360904 +  -2.5  -3.29251   AGGTCATCAATTATT          GGATAATTT CCTTAA AAATTAGCC           TGTTGTGAATGTTTC  46 4
CLC90_RS01525  362298 ..  362314 +  -9.4  -5.15634   AATCGGAAGATTGAA              GGGAGG TGGTT CCTCCC              TTTTTTAATCAGCTA 100 70
CLC90_RS01540  366227 ..  366243 +  -2.1  -4.64657   TTTGACGTTTCGTCC              GTGCTGC TCT GCCGTGC              TTTTTGCCGATTTCG  63 396
CLC90_RS01585  373724 ..  373748 +  -4.9  -3.89614   GGCGACACTATTGGG          TAACAGACCGG TTA TCGGTCTGAGA          TTTCTGAAGATTAAC  59 96
        kefG NONE
        kefB NONE
CLC90_RS01615 NONE
CLC90_RS01620  381460 ..  381477 + -12.7   -3.9392   ACGCGTCAATAAAAA             GCCAGCC GCAA GGCTGGC              TTCTTTGCAATACCA 100 47
CLC90_RS01630  382847 ..  382871 + -13.6  -4.96848   TCTGACCATTAAAAA          CCGCTGCGAA TTATT TTCGCGGCGG          TTTTTGTATCCAGCA 100 55
CLC90_RS01635  383785 ..  383797 +  -4.7  -3.91332   CTGATAGGACATGAA                CGCTG ATG CTGCG                TTATTGTCTACTGGT  61 20
        tusD  384154 ..  384165 +  -2.2  -3.42366   CTGAAGCGGCGCTGA                CATG CGAC CGTG                 TTGTACAATTTTAGG  47 0
        tusC NONE
        tusB NONE
CLC90_RS01655 NONE
CLC90_RS01660  385925 ..  385941 +    -3  -2.83715   CGTTCGCCCACTACC             GC-TGGT AATC ACCACGC              TGTAGTCATGCTAAC  43 18
        fusA NONE
         tuf  389417 ..  389432 + -11.8  -5.71712   CTGATTAAGTTAGAA              GGGCGC TCAG GCGCCC               TTTTTTTATATAAAA 100 49
CLC90_RS01680 NONE
CLC90_RS01685  390290 ..  390313 +  -9.7  -3.39327   GTACCGCACGAATAA          GTGAGTATC AAATTG GATACTCAC           TTATGGCTATAACAA  76 49
CLC90_RS01690  391096 ..  391110 +  -3.5  -2.72379   AGACGTGCAGATCAG               CCTGG GTTAA TCAGG               TCATTGAGCGATTGA  44 16
CLC90_RS01695 NONE
CLC90_RS01700 NONE
CLC90_RS01705  392697 ..  392708 +    -3  -3.12668   AGTCGGAGGAGTAAA                CAAT GGCA ATTG                 TTAAATGTAAACCTA  46 40
CLC90_RS01710 NONE
CLC90_RS01715 NONE
        rplV NONE
CLC90_RS01725 NONE
CLC90_RS01730 NONE
CLC90_RS01735 NONE
CLC90_RS01740  395771 ..  395797 + -13.9    -5.252   CCAACTCGCATAGAA         TAAACGGCTCA GAAAG TGAGCCGTTTA         TTTTTTCTACCCATA 100 49
CLC90_RS01745 NONE
CLC90_RS01750 NONE
CLC90_RS01755 NONE
CLC90_RS01760 NONE
CLC90_RS01765  397892 ..  397902 +  -3.2  -2.60075   TGGTGGCGAGATTAT                 CTGC TAC GTAG                 CTTAATTCGGGAGGA  42 10
CLC90_RS01770 NONE
CLC90_RS01775  398802 ..  398812 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  47 9
CLC90_RS01780 NONE
CLC90_RS01785 NONE
CLC90_RS01790 NONE
        secY NONE
CLC90_RS01800  401475 ..  401504 + -12.3  -4.60797   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTGACAG 100 55
CLC90_RS01805 NONE
CLC90_RS01810  402344 ..  402360 +  -4.3  -4.42851   GTCCGCCGAAAAAGC              GCCGCGT ATA ACGTTGC              TTTTAGGTTTGTTGG  66 15
CLC90_RS01815  402990 ..  403008 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  77 10
CLC90_RS01820 NONE
        rplQ  404468 ..  404481 +  -9.5  -5.42862   AAACGCGTAAAAAAA               CCGGG CTTG CCCGG                TTTTTTTACGCCTAT 100 46
CLC90_RS01830  405431 ..  405449 +    -3  -4.57569   TCATTGTTCGGAGGA             CAGCAGTA TCA TTCGGCTG             TTTTTCAAACAATAC  63 60
CLC90_RS01835  405833 ..  405846 +  -4.5  -4.56775   GGTGCCGGTGGCACC               GCAGG TTCT TCTGC                TTTTTCACGACGCAT  71 166
        dprA NONE
CLC90_RS01870  412295 ..  412311 +  -5.1  -2.62184   TGAAGTGAATGAGGG              CTACCTG CAC TAGGTGG              TAGTATGAGAGCAGA  49 13
CLC90_RS01875 NONE
        tsaC NONE
CLC90_RS01885  414621 ..  414635 +   -10  -3.85817   ATTTCCTATCGTGCA               GCCATG AAG CATGGC               TTTATGCCCGACGGT  79 354
CLC90_RS01895  417060 ..  417083 +  -5.2  -3.81929   TAACGAGCAAATAAG          GCCGGACTGA GAAA TTGGTCGGGC           TTTAGTACCTTGTTG  61 82
CLC90_RS01900  417206 ..  417223 +  -2.7  -2.66291   CGTTGCAGCGGCATT             CGTTTAT CACC ATCAACG              TCATGTCACTGTGTG  41 57
CLC90_RS01905  417372 ..  417420 +  -9.2  -3.45839   ACCATATAAAAAAAC TATTTCAAAACGTATTGCT-ACC GCAA GGTGAGCAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  76 37
CLC90_RS01910  420620 ..  420630 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGTGTTTGAGAG  82 12
         rrf  420860 ..  420880 + -10.4  -4.84527   CAAATCAAGCCGAAA            CCCCATGC CCAAA GCGTGGGG            TTTTTGCTATGTGCG 100 43
        gltP  427479 ..  427508 + -10.8   -5.3236   ATAGTTTGGGCTGAA       CCCGTTATTTGC CAGAGC GCGAGTAACGGG        TTTTTTATACATTAT 100 47
CLC90_RS01945 NONE
        yedF  430778 ..  430790 +  -4.8  -3.41807   ATTGATAAAACAGCA                TGCC GCTTG GGCA                TTCACTTTGTTTCGG  55 401
CLC90_RS01955 NONE
CLC90_RS01960 NONE
        neuC NONE
        neuB  436040 ..  436050 +  -5.4  -3.09516   AAGTTATGCCGCTGG                 GGAT TTA ATCC                 TTGAGTAGTAAGCCA  53 7
CLC90_RS01975  436664 ..  436675 +  -5.8  -2.76263   GGAAGAGATGCTATG                CGGT GAAA ACCG                 TAATTAAATAGTCAC  53 3
CLC90_RS01980 NONE
CLC90_RS01985 NONE
CLC90_RS01990 NONE
CLC90_RS01995  440167 ..  440179 +  -5.5  -5.38958   CTGGACAGAATATCG                TCGTC GAT GACGG                TTTTTCTTTATAAGT  84 0
CLC90_RS02000 NONE
CLC90_RS02005 NONE
CLC90_RS02010 NONE
CLC90_RS02015 NONE
        hisH NONE
CLC90_RS02025 NONE
        fnlA NONE
CLC90_RS02035 NONE
CLC90_RS02040 NONE
CLC90_RS02045 NONE
CLC90_RS02050  451531 ..  451554 + -11.7   -3.2964   ATTGTACGTGAAAAA          TCCCGCTCG CATTAA CGGGCGGGA           TTGTCAAGAGCCTTT  86 91
        fxsA  458538 ..  458559 +  -2.4    -3.794   TTTGTCTCATTTAGG           CAGAAAAA TTAAAT TTTTTTTG            TTTGCTCCCTTGAAG  51 128
CLC90_RS02090 NONE
        groL  460714 ..  460735 + -10.1  -5.69793   AGCTATAAACCTAAA           GCGAGTGGG GAAA CCTGCTCGC            TTTTTTCTTTCCTGT 100 76
CLC90_RS02100  461457 ..  461489 +    -5  -4.88736   GCTGAATAAGATCAA     TA-ATCAGGAGATGC CAAG GTATCTCCTGACCTA      TTTTTATGGCTAATC  74 62
         efp  463200 ..  463238 + -10.4  -3.85567   CAGTTAATAAATAAA   GAACCCCAATAATTGAGT GGC ATTCGAATATTGGGGCTC   TTTACGTTTCCCATT  86 90
        sugE  470884 ..  470902 +  -2.4  -3.89346   GTAATGAGTGTGGCT             CTTGATTG ACC CAAATAAG             TTTATCCACTGGGAA  51 151
CLC90_RS02175  476428 ..  476455 +   -15  -3.86822   TGTCAGCAGTCTGAA        GAGCCTGATTCT TTAG GGAATCAGGCTC         TTTGTCCAAAAATTC 100 99
CLC90_RS02195  482661 ..  482679 +    -6  -3.17392   GGCAAAAAGCACACA             TTGCTGAT TTA ATCAGCAC             TTGAATTAAAAAATG  55 161
CLC90_RS02200  482909 ..  482930 +  -3.7  -2.94099   GGCAGAAGCTAACAA           TGTCGGTGA GCAC TCACTAACA            TATGTGATGCGGGAA  46 57
CLC90_RS02205 NONE
CLC90_RS02210  483314 ..  483326 +  -2.7  -4.50122   TCAATTTTAACCATT                TGTTT TAA AAGCA                TATTTTTTTATGTGA  61 190
CLC90_RS02220 NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA  491280 ..  491293 +  -4.5  -3.33696   ACGCAGTTTATTTTC               GAGCC AATA GGTTC                TTAGTTAAAAACAAC  53 91
CLC90_RS02245  491696 ..  491707 +  -7.2  -4.64657   ATGGCCTTATGTTCT                CCGC ACTC GCGG                 TTTTTACCCGTTTGA  81 85
        hflX  493000 ..  493010 +  -6.8  -3.90112   AGAGCAGGAGCTGGT                 CGAC TAC GTCG                 TTTAATTGACCCGCG  67 10
        hflK NONE
        hflC  495434 ..  495451 + -10.5  -4.78848   GAACGTTTGATACAA             GGCCCGT TAAC GCGGGCC              TTTTCTATTTGAGGA 100 48
CLC90_RS02265 NONE
CLC90_RS02270  497110 ..  497133 + -16.8  -3.81146   CGCTATCAAAACACT          CAAACCGGGC TAAT GCCCGGTTTG           TTGTTCCTTCGGCAA 100 65
        nsrR NONE
CLC90_RS02280  500371 ..  500381 +  -3.2  -4.61868   TAATTTAATCAACGG                 CAGG TAA TCTG                 TTTTATCTGTCGATA  65 93
        rlmB  501190 ..  501207 + -11.3  -5.96219   TAAGAATGTAAAAAG             CCAGCTC TGAT GAGCTGG              TTTTTTTTGTCGGTA 100 55
CLC90_RS02290  502178 ..  502189 +    -3  -3.93256   AGTATTTCTAAAAAC                TGAT TAAA ATCA                 TTGTTTGCCGCTATC  56 30
CLC90_RS02295  503462 ..  503477 +  -6.2  -4.84359   TTTAACGTTGGGTTA              CAACAT AAGG ATGTTG               TTTTTATGGAAGTGA  80 485
CLC90_RS02300  504187 ..  504215 +  -3.2  -4.01564   CAATCAATAACAAAG       GCCATC-TGAGAT TGTC ATGTCATGGTGGC        TTTATACATATTTTA  56 106
CLC90_RS02305 NONE
CLC90_RS02310 NONE
CLC90_RS02315 NONE
CLC90_RS02320  508835 ..  508864 +  -2.7  -3.36878   ATAATAGTGCGCACC       GCTGGCATTGGCC TGAC GGCGGATCTCGGC        TTCTGCATCCATCGG  47 256
CLC90_RS02330  510143 ..  510170 +  -2.7  -4.32049   ATGGCAACGATCCGG        TAGGCGGTC-GC TCCAC GCTGATCGGCTA        TTTTGCTGACTTGTG  62 177
CLC90_RS02345 NONE
        priB  511478 ..  511490 +  -2.7  -3.68351   TTCTGGAGACTAGCC                TAATG GCA CGTTA                TTTCCGTCGTCGCAA  50 28
        rpsR NONE
CLC90_RS02360  512220 ..  512250 + -14.1  -4.11394   GCGGCTGTTAACCCG       TCAAAACGCCAGC CTCGT GCTGGCGTTTTGC       TTTTAAGGGTACAGT 100 46
CLC90_RS02370  514113 ..  514131 +   -11  -5.25799   TTTTTTGAAAAAAAA             GAGCGGTC AGT GATCGCTC             TTTTTCTATTATTTT 100 52
        cysQ  518450 ..  518464 +   -10   -3.8505   TGGCATCATCGGTGT               CGACGA TCG TCGTCG               TTTGGTAATGTTCGT  79 279
CLC90_RS02395  519318 ..  519348 +   -14  -4.63527   GCAGTCACGCCAAAT       TAATTGCGGCCCCA TAT TGGGGCCGCTAATA       TTTTTAAGCTAGTCA 100 52
CLC90_RS02410 NONE
CLC90_RS02415 NONE
CLC90_RS02420  527680 ..  527698 + -14.6  -5.60993   TTGAAAATGAAAAAA             CACCGCTC ATT GAGCGGTG             TTTTTTTGTCGAGCC 100 52
         mpl  531594 ..  531605 +  -4.4  -2.57132   ATGGGCTGCTGGTTG                TTGG CACG CCAA                 GTTCTGCGGGAAGAC  44 449
CLC90_RS02445  533290 ..  533313 + -19.6  -5.60993   TCCTGTATTGATGAA          CCGCCGGTGG TTGC CCACCGGCGG           TTTTTTTATGACGGC 100 92
CLC90_RS02455  534164 ..  534178 +  -3.5  -3.06796   ATTCAGATAGCGTTT               CGGGT GCCCG ACCTG               TTGAGTAAAGTAGAG  46 58
CLC90_RS02460  534835 ..  534845 +  -2.4  -3.73088   TCATTGCCGCTTGCT                 CAGC AGT GCCG                 TTGTTCATGGCATGT  50 310
        rplU NONE
CLC90_RS02475  536459 ..  536481 +   -12  -4.84529   TGCTAATAGATGTAA           GCCCTGCAAT TTT GTTGCGGGGC           TTTTTACATTTCTGG 100 54
CLC90_RS02480 NONE
        cgtA  538853 ..  538883 + -13.4   -4.9041   ACTTTGTCATTAACC       CCAAAAAGGCTGCC TAT GGCAGCTTTTTTTG       TTATTTTTTTATGCT 100 199
        greA  542857 ..  542870 +  -9.5  -4.36914   AAAGAAAAGAAAAAA               GGCCG CAAG CGGCC                TTTTATCGGAACAAA  88 79
        rlmE NONE
        ftsH  546080 ..  546097 + -10.5  -5.69262   TTGTGATGAATCTAA             CCCCGGG CTTG CTCGGGG              TTTTTCTTTTTGTCG 100 124
CLC90_RS02525 NONE
CLC90_RS02530  548353 ..  548365 +  -3.4  -3.53224   AATGACTCTATGCGG                GGAA TATAT TTCC                TTTCCCCGCAAAATC  49 39
        secG NONE
CLC90_RS02540  549104 ..  549114 +  -3.2  -2.84504   AACTTGCTTTTTTAT                 CGTT ATC GACG                 TAGTATTTGCCACGT  43 52
CLC90_RS02545  549212 ..  549226 +  -7.2  -5.78622   TCCGGCCCCCGCAAC               CACTTT CCT AAAGTG               TTTTTTTTCAAATAG 100 24
        rimP NONE
        nusA NONE
CLC90_RS02560  554117 ..  554140 + -12.4  -3.48924   ATCTGCTTATATCCA          TTTGGGGGGC CTTG GCCCCCCAAC           TTGTCTGGAGAATCC 100 50
        rbfA NONE
        truB  555510 ..  555526 +  -5.1  -3.09671   GTGGAATACACAGAG              TAAGCCA CCG TGGCCTA              TCTTGCGATTCCGCT  53 23
CLC90_RS02575  555922 ..  555947 + -14.8  -3.31461   TGCGAGTTTCAAGTA         GAAAGGGGCC TATTTT GGCCCCTTTC          TTCTAAGAATCGATG 100 44
         pnp  558296 ..  558328 + -13.6  -2.68823   GTAATTAAGCATTTT      TACCACTCTTTACC AACCA GGTAGGGAGTGGTA      CTTATCTCGAGGGCA  93 37
        nlpI  559342 ..  559367 +  -2.5  -5.28166   TGGTTTTTTGCCAAT         GTTTATCACCT TAAC GGGTGATGGCC          TTTTTGTTCGTTTTA  76 71
        yrbN NONE
CLC90_RS02595  561487 ..  561502 + -10.4  -5.42862   GATGAGTAATAAAAA              CCAGCC TTCG GGCTGG               TTTTTTTACGCCTAT 100 58
CLC90_RS02610  566065 ..  566090 +  -9.7  -2.57018   AGTAAAATATAAAAA         AGGGAGAGGCA GCGA TGTCTCTCCCG          ATATATTCTGTTATA  71 50
CLC90_RS02625  568785 ..  568795 +  -3.2  -2.93348   CACGGAAAAAGTTTC                 CCGT GTC ATGG                 TGTCGTGTTGATCCG  44 4
CLC90_RS02630  569344 ..  569370 + -10.9  -4.93595   TAAATCTGCCACACT         GGAGGGCTGGT CGTGT ACCAGCCTTTC         TTTTTGCATTTTTGT 100 66
CLC90_RS02655  574808 ..  574818 +  -2.4  -4.87389   GCGATCCGGCATGAG                 CGTC ACC GTCG                 TTTATTTTTAAGCTG  66 27
CLC90_RS02660  575635 ..  575654 +    -7  -2.71011   ATAAGCCATTTCCAT            GCCGCCCG GCAG CGAGTGGC             TGATTAGCCAGCAAT  56 54
        rraB  587714 ..  587735 + -11.6  -5.54894   GTTTGGTCTCATAAG           CCCGCACT TTCTAC AGTGCGGG            TTTTTTTAATGGGTT 100 65
        lptF NONE
        lptG NONE
CLC90_RS02760  596145 ..  596160 +  -6.8  -6.11644   TAGTATGAAAATCAA              GTCACC GCAA GGTGGC               TTTTTTTTTGCCTAA 100 42
CLC90_RS02780  602040 ..  602064 + -13.7  -4.39426   ACCTTGCTTTGATAG          CCATACCAGTG TTG TACTGGTATGG          TTTTGTGCCCATCTG 100 230
CLC90_RS02800 NONE
CLC90_RS02805  606469 ..  606479 +  -6.8  -3.29739   GCATTATGACGGCTA                 TGGG TAA CCCA                 TTAATATCGATTAAA  61 68
CLC90_RS02810  607058 ..  607083 +  -6.1  -3.15841   AACCAAAAAAAACAA         TCAGCCATTGC CAAA GCATTGACTGA          TATTGATACCCTTAT  57 4
CLC90_RS02815 NONE
CLC90_RS02820 NONE
CLC90_RS02825  609815 ..  609853 +  -6.2  -2.80195   CAGTAATACCGGACA  CCTCAATA-GCCTGTTA ATTTAA TGACAGCCATATTGAGG   TAATTGATAATGACT  55 339
CLC90_RS02835 NONE
CLC90_RS02855  613467 ..  613479 +  -4.8   -3.7732   TTCATGCAGGCAAGG                CGGT AAACC ACCG                TTGTTCGTATGAGGG  59 241
CLC90_RS02870 NONE
CLC90_RS02875  615578 ..  615590 +  -7.7  -2.72144   AGTTATTACGATTGC                TCCAG CCT CTGGA                CTTTGACACGCATCA  60 124
CLC90_RS02885 NONE
CLC90_RS02890  617389 ..  617413 +  -5.7  -3.72576   TATGTCGGCTTTACT          GATGAACAAGA GCC TCATGTGCATC          TTTCATCAGAGCCGA  61 209
CLC90_RS02895  618856 ..  618872 +  -2.4  -4.14243   TATACGTGATGGAAA              TTTATT AATGC AATAAA              TTTTCAAATACAATA  55 10
CLC90_RS02900  619798 ..  619808 +  -2.6  -3.59979   TCTAACTTAGGATGA                 TATA CCA TATA                 TTTCCGCTCGACAGC  50 212
CLC90_RS02905  622698 ..  622720 +   -10  -4.04752   CGATGGACTCTTCCT           GAACATCAAT TCT ATTGGTGTTC           TTTATCCTCTGCTTT  86 117
CLC90_RS02910  624057 ..  624072 +  -3.4  -4.81685   AGATAGGCAAGATGA              TAAAAA TATA TTTTTA               TTTTTCCTGCTTGGT  68 62
CLC90_RS02915  626312 ..  626325 +  -5.3  -3.29263   GATATATTGGCCTGA               GTGTT TCCA AACAC                TTCTAACCCACGTAT  55 6
CLC90_RS02920  629643 ..  629665 + -12.1  -5.10665   TTAAGTTAATAACAA           CAGGACACA ATTTA TGTGTCCTG           TTTTATTTGTTAGGT 100 103
CLC90_RS02930  632966 ..  633007 +  -8.3  -3.19389   AAGAGAAATAACACC CTAACTCCATGGT-GACATT ATC AATGTTAATTGTGGAGTTAG TTAATGCATCCGTTA  67 30
        kbaZ NONE
CLC90_RS02940 NONE
CLC90_RS02945  635967 ..  635985 +  -8.8  -2.56914   CCCAGTGAATGTGAT             TGAGCTGG CTG CCAGCGCA             TGAATTCATGAAGTA  66 4
CLC90_RS02950 NONE
CLC90_RS02955  637719 ..  637758 +  -9.2   -3.0263   GCGTCATTCTGCATG  CCGTATCCGTTCAGTGGT GATC ACATCAGACCGGATACGG   TGTTAGCAGAATGCT  71 58
CLC90_RS02960 NONE
        nagA NONE
CLC90_RS02970 NONE
        kduD NONE
CLC90_RS02980  642519 ..  642540 + -15.9  -3.80174   TCCTTGTCGGCTCGT           TCCGCGCCA TCTC TGGCGCGGA            TTCTTCTCCCGCTAT 100 170
CLC90_RS02985 NONE
CLC90_RS02990  645607 ..  645634 +  -5.6  -4.57073   ATTCTGGAAGAATCT        GCGAAAAGCTGA GTCT TTAGTTATTCGC         TTTTTAAAAAAAGTC  73 14
CLC90_RS02995  647287 ..  647303 +  -2.9  -5.06223   GCTACGTTTGTTTTC              GATATGC GAT GCTTGTC              TTTTATTTGATTTCT  70 40
CLC90_RS03000 NONE
CLC90_RS03005  648939 ..  648958 +   -15  -6.14618   TGTGTCATTTATTTT            CAGCGCCG TTTT CGGCGCTG             TTTTTTTATTTTATG 100 124
        rfaQ NONE
CLC90_RS03020  652242 ..  652255 +  -8.1  -2.71712   AAAACCGGTGCTCAA               GAGCG ATGC CGCTC                GTTTAACAACGAGCG  60 65
CLC90_RS03025  652775 ..  652791 +  -7.3  -3.83717   ATAGCACCGTAGCTT              TGATGGC CAT GTCATCA              TATTTTCACTTTTTA  70 164
CLC90_RS03030 NONE
CLC90_RS03035  657062 ..  657086 +  -4.9  -5.79526   TTTTTTACTGAAAAA          CCGTCCAGTCA CTT TAGTTGGGCGG          TTTTTTTTCGCGTAT  95 47
CLC90_RS03040  658490 ..  658513 + -10.2  -3.35679   TTTTTGTGATACGAA          CCGGGTTGCC AGTC GGTCACCCGG           TTGTGGATGCCACCC  78 47
        dhaK NONE
CLC90_RS03050 NONE
        dhaM  661796 ..  661813 +  -8.4  -4.86001   ACGCTATCTCAATAG             GGAGCC TTATCT GGCTCC              TTTTTATCGCATCCT 100 49
CLC90_RS03070  666285 ..  666297 +  -2.7  -2.99704   GCATGTGCTGTGTAA                CATAA ATC TTGTG                ATTGTTTGGTGCGAA  43 377
CLC90_RS03095 NONE
CLC90_RS03100  668720 ..  668734 +  -4.2  -3.74158   ATGATGGCGTTACCT               TTGGCT TAA AGCCGG               TTTCGCTGTCGTTGC  57 17
        prfC  670496 ..  670516 + -11.2  -4.25231   TGTCAGCCTGACTCA            TCGGGGTA TTCAT TACCCCGA            TTATTTAATTTTATT 100 48
        osmY  671585 ..  671607 +  -5.5  -5.52384   TCAATAGGTCATCAA          CGGCCAGCAC GTTT GTGA-GGCCG           TTTTTTTAATACGAA  87 141
CLC90_RS03115  671911 ..  671922 +  -2.2   -2.7035   GACTGGAGGGTTTAA                TCGC GATG GTGA                 TGGTATATGACTGAC  40 137
CLC90_RS03120 NONE
CLC90_RS03125 NONE
CLC90_RS03130  675620 ..  675658 + -10.2  -3.15861   ACGATTTTGTCATCT   CCGAGCTGGTGGGGTG TCTCTTT CACCTCGCCAGCCCGC   TTCCTCGCCATACTG  77 46
CLC90_RS03135  676901 ..  676920 + -10.6  -3.26531   ACCATTATTGACAGG            CGACGGGC AAAA GCCCGCCG             TATTGCTATTGCTGA  78 40
        deoA  678300 ..  678310 +  -2.6  -2.63784   TGGTTTATCGTCGGA                 TTAT CGA ATAA                 GCTTTATTTATTCAT  41 15
        deoB  679624 ..  679654 +  -6.7  -3.24745   CATGCTTTGATTACC       CATACCGGATCGC ATCGC GCGCTCCGGTCAG       TAATTTATTATTTTA  61 31
        deoD  680432 ..  680461 + -11.5  -3.22476   GCATAAACTATTTTG       CCAGAGTCGCA TTGTTCGC TGCGGCTCTGG        TTAATCGTGACTGAT  84 35
CLC90_RS03160  682668 ..  682680 +  -2.6    -3.767   CTGATGTAAGCTCAT                CGGG ATTTG CTCG                TTTGCTGCCTAGCTG  52 100
        radA  684237 ..  684264 +    -2  -3.83066   AACTGGCGGATGCGT        TGGCGGTTTTAGA CGA TCTGTAGC-GCCA        TTTAGTCGTGTCGTT  51 3
        nadR  685723 ..  685740 +  -4.1  -4.84492   ATAGTCATAACTTTA             TGGCCGA TTAC TTGGTCA              TTTTCTTATACTTGA  71 129
CLC90_RS03195  692977 ..  692994 +  -4.1  -3.75437   TTCATTAAGCATAAG             CAGGTAG TTAA CTAACTG              TTTAATAAAATCATT  57 191
CLC90_RS03200 NONE
CLC90_RS03205  695996 ..  696011 +  -6.8  -3.70902   GTGGTCACTCGCTGA              CGCGCA CCGG TGCGTG               TTTCGGTATCGCCGA  63 437
        gpmB  696943 ..  696953 +    -4  -2.72144   CGGGAAGAAACGTTC                 GATA TCG TATC                 CTTTCCGGCGAGTCA  44 106
        creA  698456 ..  698473 +  -6.9  -5.50499   ATGGATAAAAAAAAA             CCAGCAC TTCC GCGCTGG              TTTTTTTGCCTATCA  91 50
        thrL  700240 ..  700262 +   -12  -5.76949   GAAACACAGAAAAAA           GCCCGCAC CTAAACA GTGCGGGC           TTTTTTTTCGGCATA 100 44
CLC90_RS03240  702737 ..  702751 +  -4.2  -2.84013   TTATTACGCACATTA               TCCTGG AAG CTGGGA               GTTTAAATATGGTTA  46 5
CLC90_RS03245 NONE
CLC90_RS03250  705022 ..  705045 + -15.4  -3.17229   GACATCGCAAAAGCA          GAAAAGGGCC GGTT GGCCCTTTTC           TATTAATGATGACGT 100 65
         tal  707165 ..  707180 +  -4.6  -5.60993   CGATTGAAAGAAAAA              GGTGGC GTAA GCTGCC               TTTTTTTATGGAAAA  91 58
CLC90_RS03265  707972 ..  707982 +    -4  -3.59583   AATTTGTACGGTATA                 GTAA CTT TTAC                 TTTACAAATGGTTGT  54 87
CLC90_RS03270  709385 ..  709405 + -14.1  -3.76837   TCTTTTCTCAATAAA            TAGCCCATG CAT CATGGGCTA            TTCTTAACTTATCTA 100 59
        dnaK  715047 ..  715088 +  -8.5  -3.04144   CATACTGTTGCTGGA AACCAGCACGGGCGTCGAG GCAA CTCTACGCCCGTGCACGCA  TGTTAAGGGTAGGAA  65 72
        dnaJ  716281 ..  716300 +   -10  -5.52384   TTATTGAAAATAAAA            TCCTCGGT TGAT ACCGGGGA             TTTTTTTCGTCAGGA 100 61
        nhaA  717711 ..  717726 +  -2.5  -3.26844   GTCGATGCGGTGTAA              TGCTG TGATAT CGGCA               GTTTTGCTTGATGGG  46 75
        nhaR  718836 ..  718849 +  -9.5  -3.98256   GTGAATATAAAAAAA               CCGGC CTAA GCCGG                TCTTTTTACTAAGCA  83 125
CLC90_RS03310 NONE
CLC90_RS03315 NONE
CLC90_RS03320 NONE
CLC90_RS03325 NONE
CLC90_RS03330 NONE
CLC90_RS03335 NONE
CLC90_RS03340  725279 ..  725295 +  -9.4  -5.60993   CGGAATAGAGTAAAA              GCAGCC CAAAA GGCTGC              TTTTTTTATGCCGAA 100 46
CLC90_RS03345  726493 ..  726526 +  -4.7  -6.34616   ATATTTATAAGTCAC     TGATAGCATGGTGATA TTT TATCGCCTTGCT-TTA     TTTTTTTTATTTTAA 100 71
CLC90_RS03350 NONE
CLC90_RS03355  731834 ..  731845 +  -4.4   -3.9901   TTGCAAAGGTAGCCT                TGCA AGAA TGCA                 TTCTTCATTTTGATT  60 521
CLC90_RS03365 NONE
CLC90_RS03370  733603 ..  733616 +  -3.9  -2.91681   TCTCTATCCTGGTAT               TAAGA GCTA TCTTA                TATGTGCGATTAGCA  46 58
CLC90_RS03375  734391 ..  734411 +    -9  -5.61881   TATCATTAACCTCAA            TGGAGGCA TCAAC TGCCTCCG            TTTTTATTTTTACAA 100 213
CLC90_RS03380  735454 ..  735494 +    -2  -5.43866   TGGCACAAATTGATT CCGTGCCATTTA-ATCTCGT TAG AC-AGATTTAGACTGCACGG TTTTTTTGAGCGTTG  78 453
        djlA  743404 ..  743415 +  -5.8  -4.05678   TCTTTTTGACCGCGT                TCCC GTTC GGGA                 TATTTTGTTTGAAAA  66 154
CLC90_RS03435  751058 ..  751076 +    -6   -3.6682   CGACGTTGGCAGACT             TGATTCAG CAA CTGAAGCA             TTTCGGTGCGTAAGG  61 203
        sgrT  756360 ..  756381 + -10.1  -5.55769   TGGTGTTTTTCACCA           GCCAGTGGG GCGA CCTGCTGGC            TTTTTTATTCTCCGA 100 108
CLC90_RS03465  758070 ..  758082 +  -9.1  -3.01712   TCCGTAATCCGTCAG                TGCCC AAG GGGCA                TGTTCACGGGAGGAG  66 419
        leuO  764508 ..  764536 + -16.1   -4.3586   CTACAGGTACTGTTA        CTACTGGGGTGCT TTC GGTACCCCAGTAG        TTTTGCTGTCAGTCA 100 54
CLC90_RS03500  766740 ..  766750 +  -2.4  -4.44608   TATCATCCTCTCCAG                 CCTC ATC GCGG                 TTCTTTTTGCATAAA  60 127
        ilvI NONE
        ilvN  769325 ..  769344 + -11.4  -6.17292   GCTGCATAATTTAAG            GCTCTGCG TTGA CGCAGGGC             TTTTTTTTTACATTT 100 60
CLC90_RS03515  770545 ..  770570 + -13.3  -3.58726   TGAATCATGAATGCA         ATCGGGCACCT AAAT AGGTGCCCGAA          TTCTATCTAAAACGC 100 46
        mraZ NONE
        rsmH NONE
        ftsL NONE
        ftsI NONE
CLC90_RS03545 NONE
CLC90_RS03550 NONE
CLC90_RS03555 NONE
CLC90_RS03560 NONE
        ftsW NONE
        murG NONE
CLC90_RS03575 NONE
CLC90_RS03580 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ  788814 ..  788824 +  -3.2  -2.74122   TAATTTCCGAAAATT                 TGGA ATC TCCG                 CTCTTTGTGCTAAAC  43 38
CLC90_RS03600  790251 ..  790268 +  -5.5  -3.45054   ACGATTGAGTTTTAA             CAGTGCG ACAG CGCGTTG              TTGTACGTTGTGCAG  56 455
        secM  790956 ..  790974 +  -8.8  -3.30771   TTTAACGAAACCTTT             GACCGCCG GTT TGGTGGTC             TTGTAAGAGATATAA  71 61
        secA  793750 ..  793776 +  -9.3  -4.90013   TTTAAACAGTAAATT         GCAGGGCGGCC GAATA GACCGCCCTTC         TTTTTGCTTAAATTC 100 62
        mutT  794240 ..  794264 +  -7.2  -3.31263   GTAAAGCCTCTTGGA          TAGGAGCAGT CTCTC GTTGCTCCTA          TTATCACAATGGGAT  64 37
CLC90_RS03640  797429 ..  797448 +  -5.7   -4.8622   CTGAATATTATGAAA            GGACACT GATTGA GGTGTCC             TTTTTCGTTGCCCGC  78 88
        ampD NONE
        ampE  803638 ..  803665 +  -8.5  -3.54771   CAGCGGTTTGGCTCG        CGCATCAGC TTATTCCGCT GCTGATGCG         TTGTGGTGTTATCAG  71 140
CLC90_RS03685  805645 ..  805657 +  -6.3  -3.05816   GTCACGTTTTTGAAA                TTGGT ATT ACCAA                TTGACTCCGCGCTAC  56 9
        pdhR  806496 ..  806508 +  -7.7  -2.65145   AGGATTAAGGGCTTG                TCCTC ATA GAGGA                TCGGTTCTATGTGCT  60 33
        aceE NONE
CLC90_RS03700  811225 ..  811250 +  -9.7  -3.83675   TGGTTATGTAATCCA         TGAGGCCGGCG TTTG TGTCGGCCTTA          TTATTACTTGGCTTA  84 30
        lpdA  812938 ..  812958 + -12.6   -4.7373   AGAAAGAACATCAAA            CGGCTCCT TATTC AGGAGCCG            TTTTTACTGAAATAA 100 55
        acnB  817822 ..  817838 + -11.5  -5.87996   GAGTTAATGATTGAA              GGGGGCC AAT GGCCTCC              TTTTTTTATTGGTTA 100 65
CLC90_RS03720  818653 ..  818678 +  -6.1  -4.72986   GTGTGAAATAAGACA         GGGCAGCAACCA AGG TGGC-GTTGCCC         TTTTTCATGGCGCTG  78 189
        cueO  823606 ..  823630 + -11.4   -3.3217   GAGTGCCTAACCGAC          TCCCCGAGCC TAACT GGCTCGGGAA          ATTTTATCGTTCCAG  86 31
CLC90_RS03750  824574 ..  824585 +  -2.2   -3.8709   GCCATAAACCCAACC                GTGA ATCA TCGC                 TTTCTGCCCACGTTT  52 305
CLC90_RS03760 NONE
CLC90_RS03765  827172 ..  827187 +  -3.2  -3.76815   TAGCATCTTATGCTA              TGCTGG CGCA CCAGAA               TTTCCCCTTTTCACT  53 164
CLC90_RS03770  828571 ..  828588 + -11.3  -5.29782   GTCAAAAAATAAAAA             GGAGCCA AAAA TGGCTCC              TTTTTTATGAATATC 100 54
        hrpB  838904 ..  838916 +  -3.4  -2.72568   CAAGAAGTATCAAAG                CTGA TGAAT TCAG                ATGTTTCCTCTTCCC  42 22
CLC90_RS03830  841698 ..  841716 +  -8.1  -5.24129   GTTCGATAATAAAAA             CCCGCAG CGTCA TTGCGGG             TTTTTTATACGAAAA  95 245
        clcA  844734 ..  844766 +  -2.8  -2.76263   AATATAACATTGAAT      GCCAATACTTGA ACCAATTAC TCAGGTATTGGA      TAATTGGCTCATAGA  42 41
        erpA  845210 ..  845230 +    -9  -5.90981   TTGAGGCATAAAAAA           CCGCG-ACC TACA GGTTCGCGG            TTTTTTTTAATCTGG 100 55
CLC90_RS03865  849174 ..  849191 +  -2.7  -3.55946   TAAGCATTAATGAAC             TTAACGG AATG CAGTTAA              TCTTATTTCACATGG  48 119
        degP  850730 ..  850752 + -11.3  -4.61747   GTCTGTTAGCGAGGA           GGGCAGGGT GATGA ATCCTGCCC           TTTTGTGATTGTTCA 100 47
        rlmD NONE
CLC90_RS03885  857220 ..  857232 +  -4.8  -4.32034   TCACTTTAATGATAA                TGGC TTCTT GCCA                TTTTAATCGTGGTCA  66 45
CLC90_RS03890 NONE
        pyrG  860043 ..  860066 + -13.1  -3.02109   TAAAATATTTGATAG          GGGGGCGGC TGAGAT GTCGCCCCC           TCTGTCTGGAGTTTT  95 38
CLC90_RS03900  861432 ..  861445 +  -9.5  -6.44931   ATATTTATTAAAGAA               CCCGC TTCG GCGGG                TTTTTTTTTGTTCTT 100 53
        queE  862305 ..  862317 +  -9.1  -4.68655   CCGCGATAAATGCAG                CCTGC CGA GCAGG                TTTCTTTTACCATTA 100 101
CLC90_RS03915 NONE
        cysI NONE
CLC90_RS03925  867327 ..  867354 +  -6.2  -2.65354   ATCGGGAATCGGGTT        ACACGAGGG-CAG CTG CCGTCCCTCGTGG        TGAGTTTACAATAAC  54 85
        cobA NONE
        cysD NONE
        cysN NONE
        cysC NONE
CLC90_RS03965  874634 ..  874648 +  -6.4  -3.65603   ATAGTGATGGAAATT               GCGTAA TGA TTGCGC               TTATTGCCACTGTTT  63 278
        ftsB NONE
CLC90_RS03975 NONE
CLC90_RS03980 NONE
        truD NONE
        surE NONE
CLC90_RS03995  878859 ..  878875 +  -7.3  -4.43624   GGTGCTAACAACACC              CAAGGTG CTG CATCTTG              TTTCTTCTGTGCTTT  78 147
        nlpD NONE
        rpoS  881184 ..  881204 +  -9.7  -5.69379   GAAATTAAATAAAAA            CGGTGAGCA TTT TGCTCACCA            TTTTTTTGCTTATAT 100 160
CLC90_RS04015  884358 ..  884409 +  -7.3  -2.81464   GCAAGGATATGAAAA TCTGGACCTCGGTGGACAGTTAG TGTTTT CTAACTGTAGCCGGAGGTCTGGA TATGATGAATGCTAA  59 29
CLC90_RS04040 NONE
CLC90_RS04045 NONE
CLC90_RS04050 NONE
CLC90_RS04055 NONE
CLC90_RS04060  891231 ..  891247 +  -5.9   -4.1721   AAAATCATAAATACC              TAGTGAG TAG CTCATTA              TTTTAGACTGTAAAT  68 61
CLC90_RS04145 NONE
CLC90_RS04150 NONE
CLC90_RS04155 NONE
CLC90_RS04160 NONE
CLC90_RS04165 NONE
CLC90_RS04170 NONE
CLC90_RS04175 NONE
CLC90_RS04180 NONE
CLC90_RS04185 NONE
CLC90_RS04190 NONE
CLC90_RS04195 NONE
CLC90_RS04200 NONE
CLC90_RS04205 NONE
        sicA NONE
CLC90_RS04215 NONE
CLC90_RS04220  921398 ..  921411 +  -2.3  -2.52933   AAATGCCACTATTAG               GGCGA TGAT TCGCG                GTTAATCCGTTACGA  39 7
CLC90_RS04225 NONE
CLC90_RS04230  922567 ..  922595 + -10.5  -4.07618   GTTACGCCATATATT        TATTACCCAGA TGATTTT TCTGGGTAATA        TTTCATTATTGCCAG  91 55
CLC90_RS04235 NONE
CLC90_RS04240  925318 ..  925345 + -18.6  -2.80966   AGCCAGTTAGGTAGT        CAGCAGGAAGGA TGTT TCCTTCCTGCTG         TGATCTTCATTAAAT 100 27
CLC90_RS04245  925972 ..  925985 +  -2.5  -3.69094   TATTATAAATGGAGT               TTTTA TGGA TAAAA                TTTCAATGGTCACTT  50 33
CLC90_RS04250  927357 ..  927377 + -11.1  -5.09685   TGGCTTGTTTGTAAA            CGCCCTGCT AAT AACAGGGCG            TTTTTCTGTCTGTTA 100 102
CLC90_RS04265  931282 ..  931292 +  -4.6  -3.11768   GAGAAACGGCCCGAA                 TGGC AGT GCCG                 TATTCAGTGGTCTGC  50 102
CLC90_RS04340  944456 ..  944494 + -12.4  -3.43689   AAGTAGAAGTATTAA   CTCGGCGTCTGGCCGTGG TTA TTAGAGCCAGACGCTGAG   TTATCCTACCGTTTT 100 99
CLC90_RS04360  950372 ..  950391 +  -5.8  -2.71263   AAAAAATAGGCTTGA            TACTGTAT GATT GTACAGTA             TAATTGAGCGCAATT  52 32
        recA  951562 ..  951592 +  -2.7  -2.66326   TATTGAACCTGAAAC      TCGGG-CTATATTA GGAA TAATATGTCCCCGA       TAGATTTCGAGTTGC  41 43
        recX  952317 ..  952337 +  -2.6  -4.34263   GAATGCACGCGGTAT            TTTACTTC CCTCC GAAGAAAA            TTTATCTTATTCCCA  59 39
        alaS  955096 ..  955123 +  -6.2   -4.7339   CGTGTAAAATAAATA        CGCCATACCCCA AAAA TAGAGTGTGGCG         TTTTTCAAGTTTCTT  77 53
        csrA  955514 ..  955548 + -12.8   -3.9373   CGACTTACTGATATT     GAAGCAGCGTCTCGCG ATA TGCGAGGCGCTACTGC     TTTACCTTTTCCCTC 100 30
CLC90_RS04385 NONE
CLC90_RS04390  956035 ..  956062 +    -2  -2.75183   TTCGAATCTTCCTGG        GTGCACCATATT TTGC AGTATGGTGAAA         TAGTTAAATGAACGT  41 18
CLC90_RS04395  956169 ..  956179 +  -3.2  -4.54323   GTTCGAATCTTCCTG                 GGTG CAC CATC                 TTTGTTGTTATAGTT  63 17
CLC90_RS04400  956318 ..  956333 +  -8.2  -4.67635   CACCATATTAAGAAA              CCTCGC TTCT GCGGGG               TTTTCTGCTTTTAGC  91 36
CLC90_RS04405  956486 ..  956501 +  -8.2  -4.67635   CACCATATTAAGAAA              CCTCGC TTCT GCGGGG               TTTTCTGCTTTTAGC  91 36
CLC90_RS04410  956654 ..  956669 +  -8.2  -4.67635   CACCATATTAAGAAA              CCTCGC TTCT GCGGGG               TTTTCTGCTTTTAGC  91 36
CLC90_RS04415  956822 ..  956837 +  -8.2  -4.64846   CACCATATTAAGAAA              CCTCGC TTCT GCGGGG               TTTTCTGCTTTATGA  91 36
CLC90_RS04420  957989 ..  958000 +  -3.6   -3.2794   GCGAATATGGACGTG                GTGG ATGT CCGC                 TTGCTGTGAGTAGCA  49 5
CLC90_RS04425 NONE
        gshA  960207 ..  960217 +    -4  -2.69257   TTCGAAAAAAAATTC                 TTCT ATA AGAA                 ATAATTTTTTTGAGG  45 158
CLC90_RS04435  960783 ..  960796 +  -8.1   -5.4833   CATTAGCGGAAAAAA               GACGC GAGA GCGTC                TTTTTTATTGGCTGA 100 50
CLC90_RS04450  964678 ..  964711 + -18.3  -4.67982   GGGCTTTTTATATTG     CAACGGAACCCCGTT CCCC GATGGGGTTCCGTTG      TTTTATTAACTAAAG 100 196
CLC90_RS04455 NONE
        rimM  965590 ..  965601 +    -3  -2.64313   GCGAGTGGAACAAAA                CAAT GTGG ATTG                 GTGTTATTAGCCTGT  42 62
        trmD  966377 ..  966388 +  -4.4  -3.65902   CTTGTGCTAACGATC                CTGA TATA TCAG                 TTTACCTAGGGTAAG  54 55
        rplS  966810 ..  966832 + -15.6  -5.96894   GTTAATAGTTATGAA           GGGGTTAGCC ATT GGCTGACCCC           TTTTTTTATTTGAGT 100 66
CLC90_RS04490 NONE
CLC90_RS04495  973199 ..  973220 +  -7.3    -5.252   GAGGCTGGTGATAAA           GTCATCCTG TTGC TGGGATGAC            TTTTTTATGGGGGTA  91 56
        rluD NONE
        pgeF  978108 ..  978122 +  -5.7  -3.83998   ACAACCTTGAAAACT               TGAGG GGTGA CCTCA               TTTAATCTCCAGTAG  63 100
        clpB  980747 ..  980776 + -10.7  -4.38748   CAGTAAATCGTGGAA       TGGAACGGGGCAA TATT TCGCCCCGTTCTG        TTGTTTATTTATCCA 100 35
CLC90_RS04535  982848 ..  982871 +  -5.2  -3.81929   TAACGAGCAAATAAG          GCCGGACTGA GAAA TTGGTCGGGC           TTTAGTACCTTGTTG  61 82
CLC90_RS04540  982994 ..  983011 +  -2.7  -2.66291   CGTTGCAGCGGCATT             CGTTTAT CACC ATCAACG              TCATGTCACTGTGTG  41 57
CLC90_RS04545  983160 ..  983208 +  -9.2  -3.45839   ACCATATAAAAAAAC TATTTCAAAACGTATTGCT-ACC GCAA GGTGAGCAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  76 37
CLC90_RS04550  986408 ..  986418 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGTGTTTGAGAG  82 12
         rrf NONE
CLC90_RS04560  986819 ..  986839 + -14.1  -5.20154   CCACTTATTGCATAA            CCCTGAATC CTA GATTCAGGG            TTTTTTGCATTCTAT 100 38
CLC90_RS04565  988389 ..  988404 + -10.4  -4.63542   TAAGCATAAAAAAAA              GCACCC CGTA GGGTGC               TTTTTAGCAGTTATC 100 60
CLC90_RS04580  991442 ..  991491 +  -4.4  -4.42386   TGTAGCCAGTATCCT CTAGCGTTG-G-CGCGTTAGC-CGC ATC GCGGGCTAATACGTCGCAACGTTCG TTTTCTGGATGCCCG  65 61
CLC90_RS04590  992813 ..  992833 +  -5.3  -2.76189   TTACCTCGTTCTTAA            CCGGAACAC AGC GTGGTGCGG            TAGTTCAGTCGGTTA  50 123
CLC90_RS04595  992909 ..  992946 + -11.6  -3.95219   CGCACCGCCAATATT  C-A-GAAGCCCTGAGTTA GCAA TAACTCAGGGCTTCGTCG   TTTCTGCGCTTTACC 100 31
CLC90_RS04605  996472 ..  996490 + -10.2  -3.37142   GATATAGCCCGATCA             CGCCGTGA CTT TCCCGGCG             TATTATGCTGTTTTC  78 55
CLC90_RS04610  997522 ..  997536 +  -4.2    -3.745   TAATATATGTCGAAT               TGCGGT GAC GCTGCA               TGTTTTGCTCGGTCA  55 163
CLC90_RS04620 NONE
CLC90_RS04625 NONE
CLC90_RS04630 NONE
CLC90_RS04635 NONE
        nqrE NONE
        nqrF 1004482 .. 1004498 +  -6.7  -2.87564   TCTGACAGCGTTCAA              CAATAAT AGG ATTATTG              TGTATAAAAAGATAA  57 48
CLC90_RS04650 1005515 .. 1005525 +  -3.2  -3.11292   TTCCTGAGAAATCGA                 TCCT AGG GGGA                 GTTTATGTTGACGGT  46 20
        nqrM 1005763 .. 1005786 + -15.3   -2.7556   TATTCTTTGACATGA          CAGCCCGGC GCTATG GCCGGGCTG           TACTTACCTAGACTT 100 31
CLC90_RS04665 1008063 .. 1008085 + -11.3  -3.01119   ATCACCATAAAAAAA          CGGCG-TGCC CACA GGCAACGCCG           TCTATATCACTCAAT  83 48
CLC90_RS04675 1010338 .. 1010366 + -12.5  -3.97388   ATAATTTACATAGCT        TTAAACGTCCGAC GTC GTCGGGCGTTTCA        TTTCTCCTACGGTAT 100 37
        frsA NONE
CLC90_RS04685 1012192 .. 1012217 + -11.9  -2.96216   ATAAACCTGTGATTT         CGCGTTATGCC TGTT GGCATAACGCC          TCTCTCCTGCTACAA  86 56
CLC90_RS04690 NONE
        proA 1014762 .. 1014783 + -10.1  -2.60776   ATTTAAGCTGTCTAA           CGGGCATCT ATTC AGTTGCCCG            CGTTTTTAGCCAGTT  71 140
CLC90_RS04700 1015660 .. 1015695 +  -4.1   -3.4252   GAAGAAATATAGTGA    TCGAGGTTGGCA-CTT AGGAC GAGATGCTAGCTTCGA    TTCTGCTGAATGAGA  52 29
CLC90_RS04705 1016314 .. 1016324 +  -3.2  -4.65895   TGACGAACGCCAATT                 GTTC ATA GAGC                 TTTTTGGCTCGAGGG  66 267
CLC90_RS04715 1017304 .. 1017356 +  -7.2   -4.3467   TAGATGCAGTACATT GGGTTTCGATTGGAGTCA-TCAG ATTAATCA CTGACTGATTTCGTTCGGAACCC TTTTGCTATCCAGAT  75 67
CLC90_RS04720 NONE
CLC90_RS04725 1021002 .. 1021024 +  -2.7  -5.14563   ATGACTTTTACAGGA           CCGGTCA ACGCAATAA TGATCGG           TTTTTTAATGCAAGA  73 171
        aroL 1021947 .. 1021969 +  -8.5  -3.76884   CTAAACCTGAGTTTA           TGCCTTCAG CTTAT CTGAAGGTA           TTATTGATGGTCTCT  75 368
CLC90_RS04735 1023267 .. 1023291 +  -6.5  -4.10179   AAGTCAATGGAGTGA          TATTAGCACGA TTG TCGTGATGATA          TTTCTCTCCATTGTG  69 274
CLC90_RS04740 NONE
CLC90_RS04745 NONE
CLC90_RS04750 1026514 .. 1026532 +  -9.5  -5.57054   CTGTTGTTATCGTCA             CCGGGGC ATTTG GCTCCGG             TTTTTTTGCATTATT 100 62
        ppnP 1026973 .. 1027003 +  -7.6  -3.35679   CTCAGCTAATCAAGA       TATTGCCCTCTC CATGCCA GAGGGGGCAACA       TTATCCATGAGCCAA  66 32
CLC90_RS04765 1029550 .. 1029560 +  -2.4   -3.5518   ATAGCTAAGTCTATA                 CCGG TTT CCCG                 TTATGTCACTATTGC  47 185
        phoB 1035585 .. 1035596 +  -2.2  -2.52516   TACCGTTTCTCAACG                CGCT ATTA AGTG                 GTTAGTGCTGGAGAA  39 17
        phoR NONE
CLC90_RS04790 1038040 .. 1038051 +  -2.2   -3.7511   AAAGAAACTCTCCCC                GTGG TAAA TCAC                 TTATGTTGTAACGGC  51 165
        brnQ 1039750 .. 1039771 + -15.9  -4.72272   AAATAAGTATGTTGA           GCCACGAGC TTTT GCTCGTGGC            TTTTTGCTGAAAGAA 100 49
        proY 1041227 .. 1041243 + -10.8  -5.24129   AATAGACAAGAAGAA              CCGGGC TAAGC GCCCGG              TTTTTTATCCAGCAA 100 60
CLC90_RS04805 1043312 .. 1043327 +    -4  -4.64861   ACTGTTTGGAAGGGC              GTTGGT AAGT ACTAAC               TTTCTTTTGGGCGCG  68 11
CLC90_RS04810 1044318 .. 1044343 + -13.4  -3.84992   AGACGAAGCAAAAAA         GACCAGTCAG CATGAA CTGACTGGTC          TTGTCTTATTCGGTT 100 124
        queA NONE
CLC90_RS04830 NONE
        yajC NONE
        secD NONE
        secF 1051525 .. 1051540 +    -9  -4.93316   GTAACTTAATAAAAA              GCCTCA TTTT TGAGGC               TTTTTGCTATTATTA 100 83
        nrdR 1052244 .. 1052255 +  -4.4  -2.73124   GATTGCAGGACTAGC                TCTG CCCA CAGA                 ATTTAAGGAATAGCA  45 27
        ribD 1053386 .. 1053404 +  -3.8  -4.44461   ACCAAAGTATTAATT             TTTTGGCT TCA GGCCAATA             TTTTCTCCGCTTATT  65 28
CLC90_RS04860 NONE
        nusB NONE
CLC90_RS04870 NONE
CLC90_RS04875 1056213 .. 1056232 +  -4.2   -4.0616   CTTGACGATCTGCCT            GTTTTCGC CGCT GCGAGCAC             TTTGTCATTAACCTC  59 244
        thiI 1061266 .. 1061293 +   -12  -3.14564   TGGCGGTATTCAGAG        GCTCAAGGGCGC TTAT GCGCTCTTGAGG         TTAATGACAAAGTGC  86 44
CLC90_RS04915 1067787 .. 1067817 +  -4.7  -4.22927   TAAATATGCCCGGCG       GCAGAATGAGTTG GCGGG CAACTTCTTCAGC       TTTCTCTCTTCCTAG  64 99
CLC90_RS04930 1069924 .. 1069956 +  -3.6   -5.4505   AAGTCAACCAGCAAA     GAGGAACAGCAACC CCATACC GGT-G-TGTTCCTC     TTTTTTATTCGCCAA  84 39
        bolA 1080614 .. 1080636 +   -12  -5.08824   TAGTAGCGAAATAGA           CGAACGGCCT CTG GGGCCGTTTG           TTTTTTAACTAGCGA 100 95
CLC90_RS04990 1082313 .. 1082335 + -14.8  -5.64873   CGTTTTGACTTTTAA           GCCCGTCGCC TTT GGCAACGGGC           TTTTTTCTTATTGGA 100 79
        clpP 1083334 .. 1083346 +  -4.9  -3.57615   CGTATTTCTGTGTGC                CTATA GGC TATAG                TTTAAGCAGTATTGC  57 44
        clpX 1084778 .. 1084796 + -13.2  -4.91852   CAGTTAGTAAGATAA             TGGGGGAT TTT ATCCCCCA             TTTCTTTTTCCTCGC 100 59
CLC90_RS05005 1087325 .. 1087355 +  -4.8    -5.252   TATTGATAAAACTGA      T-GCTGGTAAGCG AAATCC TGCTTGCCAGCCA       TTTTTTGTGCCGCTA  82 58
CLC90_RS05010 1087869 .. 1087888 +   -10  -5.86332   AAGGTAAGATATAAG            GCGCATCG CTAT TGATGCGC             TTTTTTTTCGCTTGG 100 112
CLC90_RS05015 1089991 .. 1090006 + -11.8  -3.65425   GATGTAACAACGAAA              GGCCGC TTTA GCGGCC               TTTCGCATATCTAGA  93 63
CLC90_RS05020 1090506 .. 1090526 +  -8.3  -3.15758   ACTCAGAGATATCGG            CTCATGTAG TAA CAACATGAG            TTCATCGACAGTTAT  67 41
CLC90_RS05025 1091437 .. 1091455 +  -3.1  -5.26119   CCTGATCATTAACTT             CTGGTTT AGCGC AAACCCG             TTTTATTTTTGAGGC  79 247
         cof 1094927 .. 1094944 + -11.3  -6.06529   TAGCTATTAGCCAGA             GCCGGAT AATT ATCCGGC              TTTTTTTTGTCTATG 100 46
CLC90_RS05050 1096736 .. 1096748 +  -6.3  -3.15544   GATAGCTTATTTCAG                TATCC ATA GGATA                TTGATGGGCGTCGCC  57 133
CLC90_RS05055 NONE
CLC90_RS05060 1100331 .. 1100342 +  -5.8  -2.63079   GATCAGGAGGAAGTT                TCCG TTAG CGGA                 TAAATTGTGTCAGGG  52 11
CLC90_RS05065 NONE
        amtB 1102357 .. 1102386 + -10.7  -2.94411   AAATAAAGATGATAG       CGAAGGGGCGATA ACAA TATCGCCCCTGCA        ATTATTTCAACACAT  79 58
         ffs 1104744 .. 1104774 +  -3.3  -3.82084   GTAAACCATTACCAC      CATTGAGGCCGATA TGTT TACCGGC-TCAACG       TTGTTCGTCTTAACC  53 471
        acrR NONE
CLC90_RS05130 1112879 .. 1112895 +  -6.7  -2.68079   TAGAATTGCCCAATA              TTTTCAT GGA ATGAAAA              ACTTTTCTTATCATC  56 42
        mscK 1116430 .. 1116452 +  -9.9  -5.40072   AGATAAACGAATGAG           GGCGAAACC AATGC GGTTTCGTC           TTTTTTTGGGCGCGA 100 90
CLC90_RS05150 1118092 .. 1118105 +  -3.7  -3.28785   TTGAGCGTTTTCGTA               CGCGG ATTG CCTCG                TTGGCTCTTTTCAGA  49 83
CLC90_RS05155 1118801 .. 1118827 +    -8  -5.56673   CCATTCGAAAAAGTG        CGGCCTC-GCC GATATA GGTAGAGGCCG         TTTTTTGTTATCAAT 100 44
        tctD NONE
CLC90_RS05180 1124181 .. 1124192 +  -4.4  -3.83026   ATTATGCCGGTATAA                GCAT TCCC ATGC                 TTTGGTATAGAACGC  57 193
CLC90_RS05185 NONE
CLC90_RS05190 1126613 .. 1126626 +  -2.3  -2.64099   ATGCAATTGCCACCG               GGCTT CAAG ATGCC                ATTCTGATGCAAACC  40 5
        recR NONE
        htpG 1129299 .. 1129328 + -12.9  -3.53224   AATTTGTAATGCTAT       CGCCCCTGACCAA AGGC TTGGTTAGGGGCA        TTTAGCCACGCAATC 100 39
CLC90_RS05205 1130183 .. 1130199 + -11.5  -4.67968   GGGTATACCAGAGAG              GGCGGCC ATG GGTCGCC              TTTCTTATTTGTTAA 100 47
CLC90_RS05210 1131239 .. 1131251 +  -3.5  -4.45723   GAGTTGATTGTTGGA                TATAT ATA ATATA                TTTTAATATATTCTT  65 17
CLC90_RS05215 1132535 .. 1132562 +  -7.6  -5.64274   CACTGATTGATTTAA        CGGCCAGGCAGG TTTT TCTTCCTGGCCA         TTTTTTTATAAATCA 100 55
CLC90_RS05220 1134055 .. 1134087 + -11.4   -4.1673   AGTGAAAACCATATC     GACAAAAGGCCTGCA ATTT TGCTGGCC-TTTGTC      TTTGTTAGCACGTTA 100 54
CLC90_RS05230 1138157 .. 1138187 + -14.9  -4.64144   GTTTTCTTTCGTTTA       TAGGCATGACGAT TCTTT ATCGTCGTGCCTA       TTTTTACCCGTTATT 100 51
        cueR 1143289 .. 1143322 +  -6.7   -3.3482   ATCATAAGAGGATAA     CTGCCCATCAACAGCA AAG TGCCAT-GATGGGCGG     TTAATTAACGAGTTA  61 34
CLC90_RS05280 NONE
CLC90_RS05285 1150437 .. 1150459 +  -7.7   -4.8667   GCATCAACAATAAAA           CAGCGGC ATTCAGGTG GCCGCTG           TTTTTATCCGATGTA  91 66
        cysS 1155255 .. 1155285 +  -6.9  -5.50499   CATTAATTTAATTCA      TTGCGGT-TCTGGT TTTG GCCAGTCACCGCAA       TTTTTTTGCCTGTAG  91 70
CLC90_RS05315 NONE
CLC90_RS05320 1158311 .. 1158324 +  -3.9  -3.78329   TCGAGATGTGTCGGG               TTGAA TAAT TTCAA                TTTCGATTGATGACG  56 492
CLC90_RS05325 1159024 .. 1159046 + -10.6  -4.68103   TGTCGTGAATATAAA           GCATGCGG AATATAC CCGCATGC           TTTTATTAAAATTCA 100 52
CLC90_RS05330 NONE
CLC90_RS05335 NONE
CLC90_RS05340 NONE
CLC90_RS05345 1163500 .. 1163510 +  -2.6  -3.54146   ATAAAATGAGATAAA                 TAAT GAA ATTA                 TTAATTTCAACTATT  48 37
CLC90_RS05350 1164030 .. 1164042 +  -4.9  -4.70511   AGCATCTCTTATAAC                TGAAT GAC ATTCA                TTATTTTATTTTTGC  71 23
CLC90_RS05355 1164945 .. 1164968 +  -2.4  -3.31537   AAACAGCTCCTTATA          TAAGTAAGGG GTTA CCCTTAAATA           TTGATATGATATGCT  45 64
CLC90_RS05360 1166836 .. 1166866 +  -9.1  -5.00884   CATTAAAACTAAAAA      ATGCGGTT-CTGAC GTAG GTCAGTAACCGCAA       TTTTTTAGCCAGAAT 100 168
CLC90_RS05375 1168609 .. 1168637 +  -6.1  -3.34192   GAGTGAAATAGTAAA        TTGAGAGCC ACTTTCATTAC GGCTCTCAA        TTAATTAAAAACATT  59 333
CLC90_RS05380 NONE
CLC90_RS05385 NONE
        arsC 1171404 .. 1171432 +  -6.7  -5.10656   TGGGAAGTCAGGAAT        TGCCTAATCCATC TTG GATGGCTTAGTCG        TTTTGTTATTTTAAT  88 171
CLC90_RS05395 NONE
CLC90_RS05400 NONE
CLC90_RS05405 NONE
CLC90_RS05410 NONE
CLC90_RS05415 NONE
CLC90_RS05420 NONE
CLC90_RS05425 1177451 .. 1177467 +  -8.7  -2.92777   GTGATTGTTGTGGGG              GCGTGGA TGA TTCACGC              ATTTGCTGTATCGGA  68 435
CLC90_RS05430 NONE
CLC90_RS05435 NONE
CLC90_RS05440 1182136 .. 1182148 +  -4.1  -4.25104   TATAAAAAGGTCAGG                GATGT TGG GCATC                TTTTACTGGGAACGA  63 114
CLC90_RS05445 NONE
CLC90_RS05450 NONE
CLC90_RS05455 NONE
CLC90_RS05460 1185495 .. 1185509 +  -7.2  -3.89524   ATAGAAGATAAAACG               TGAATG TTA CATTCA               TTTATAAAGTAACAT  70 23
CLC90_RS05465 NONE
CLC90_RS05470 1188821 .. 1188851 +  -4.1  -4.98436   TCAGTTTTGATAAGA       TCAAGCACC ATGATGAAGGTGG GGTGCTTGA       TTTTTATGCTCTTGG  74 65
CLC90_RS05475 NONE
CLC90_RS05480 NONE
CLC90_RS05485 NONE
CLC90_RS05490 NONE
CLC90_RS05495 1199625 .. 1199641 +  -5.1  -3.08471   TAAGGGGAATTTCCC              CGTTTTC AAC GGGAACG              TTAAGTAGAATTATG  53 1
CLC90_RS05505 NONE
CLC90_RS05510 1201460 .. 1201476 +  -7.3    -5.252   TTTTACAATAAAAAA              GGATCTT CTT GAGATCC              TTTTTTCTGCACGTA  91 65
CLC90_RS05515 1202813 .. 1202829 + -12.3  -3.76393   TGCTTGATAATCATG              GCACGGT AAG ACCGTGC              TTTAAATTAACATCT 100 34
CLC90_RS05530 1205370 .. 1205386 +  -2.9  -4.56597   AGTTACATTTTGGTG              TGTCGTC ACT GACAGCA              TTTTTAACGGAACGG  65 262
        cspE 1206288 .. 1206307 +  -7.8   -5.4505   CAATATTCTTAAAAA            CCCGCC TCAACACT GGCGGG             TTTTTTATTGCCCGA 100 46
CLC90_RS05550 1207903 .. 1207923 +  -5.3  -3.27298   TAAACTCTATTTCAG            CCAGTTTCC CCT GGATTCTGG            TTAATACTTCACGCG  54 217
        tatE 1209250 .. 1209272 +  -5.5  -4.77036   CGGTTGAATAAGAAA           CGGATATCC CAAAA GGAGGTCCG           TTTTTGCTGGTCAGC  75 76
CLC90_RS05630 1224227 .. 1224257 +  -7.6  -3.72051   TCGATTAGTGCAGAA       TCTTGGCGAGAAAA TCT TTTGCTCGCTCAGA       TTTAGGATTATTGAA  70 133
CLC90_RS05680 1235613 .. 1235651 + -11.7  -2.53911   TGTATGGCTGGGATA   CCAGGATTCGAACCTGG GAATG CCAGGATCAAAACCTGG   TGCCTTACCGCTTGG  79 370
CLC90_RS05740 1244920 .. 1244945 + -17.7  -4.91109   ATTACAAACAAATCA         GCGGGAAGAGA GTGA TCTCTTCCCGC          TTTTTATCGTGAAAC 100 70
        glnS 1246798 .. 1246826 + -10.2  -5.03715   GTTAAGTCTTTGAAG        GTGGCTGCAGCG GATAA CGTTGCGGCCTC        TTTTTTGCCCATAAT 100 93
CLC90_RS05750 NONE
CLC90_RS05755 NONE
CLC90_RS05760 1252183 .. 1252199 + -10.8  -5.77853   AGTAGAGAGTCATTT              CCCCGG TGCTC CCGGGG              TTTTTTTTGCCGGTT 100 131
CLC90_RS05775 1256384 .. 1256408 +  -7.3  -3.90286   ATTCGGTTAACACGT          TTCAGGTTA CAACCGC TAACCTGAA          TTTGCATTTGTCCTC  70 458
        seqA 1258206 .. 1258240 +  -2.1  -4.78149   TCTGGCGGGTAATAG    GCCTCCTTCATTGGGC TGGA GCCTGTTGAA-GATGC     TTTTTAGCTTATAGG  66 97
CLC90_RS05795 1259945 .. 1259967 +  -9.1  -5.46657   AAGGTGTGAATAACA           GGCAGTCCT ATGGC GGGGCTGCC           TTTTTTATTCGGCTA 100 61
CLC90_RS05835 1269229 .. 1269254 + -11.1  -4.56978   CCGTTATGAAATCAA         TGCCGGTCAGC GTTC GCTGGGCGGCA          TTTGTTATTTCAACG 100 61
CLC90_RS05840 1270507 .. 1270523 +  -3.6  -2.76261   GGTCACTAGGTGATC              GGCTAC TGCGC GTCGCC              ATTTCGGGATTACGC  45 32
CLC90_RS05845 NONE
CLC90_RS05850 NONE
CLC90_RS05855 1274011 .. 1274039 +  -8.9  -2.79273   TGAGCATTGAATATT        TCACGCCATCC TATCAGC GGATGGCATGA        CTTATCTTGGCGAAA  67 38
        pxpB NONE
CLC90_RS05865 NONE
        pxpA 1276705 .. 1276720 +  -7.6  -3.14132   TCATCCAGCACAATA              TCAGCA TCAG TGCTGA               TTAATAGGGCACCAA  63 6
CLC90_RS05875 NONE
CLC90_RS05880 NONE
         pcp 1279223 .. 1279250 +  -9.2  -3.93782   ATGAAAATATCACAA        GGAAAAGTGAGC GTTA GCCCATTTTTCC         TTTAATATTCAGTGA  83 48
CLC90_RS05900 NONE
CLC90_RS05905 NONE
CLC90_RS05910 NONE
CLC90_RS05915 1285372 .. 1285391 + -12.2  -2.62396   TATGAGTTTATGTCG            CCTGGGAA TTTC TTCCCAGG             TGATATAAAAAGGTA  83 41
        sucA NONE
        odhB 1289655 .. 1289667 +  -4.1  -3.09878   ATAAAAAAGATAACT                GGTAA AGG TTGCC                TGTTGACTGGGTGAA  49 37
CLC90_RS05930 NONE
        sucD 1291982 .. 1292002 + -10.4  -4.87318   ATCTCGACATCCTAT            GGCCACCT TTTTT GGGTGGCC            TTTTTACGTTTTGAG 100 162
        cydA NONE
CLC90_RS05950 1297290 .. 1297302 +  -2.7  -2.81476   CACTGTACTAAGGAG                CATAT AGC ATGTG                GTATTTTGCCTGGAT  42 30
        cydX NONE
        ybgE 1297728 .. 1297749 + -11.7  -4.35682   TGCAGCTAATTTGCC           TTATGGGTC GTCC GACCCATAA            TTATTTTCGTTCTCA 100 44
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
CLC90_RS05990 NONE
        cpoB 1303394 .. 1303428 + -11.5  -3.21099   CTTTAGTCTTTTTAA     GCCCAGTAATTGGTC TGATT GGCTAATTTCTGGGC     TTGATCGTGCGAAGA  84 35
CLC90_RS06000 1303634 .. 1303653 +  -3.5  -3.29144   GGTTCGAATCCCGCA            CGACCCA CCATTA TGTGTCG             TTGTAAAGAAAGTAA  49 16
CLC90_RS06005 NONE
CLC90_RS06010 NONE
CLC90_RS06015 NONE
CLC90_RS06020 NONE
CLC90_RS06025 NONE
CLC90_RS06030 1304855 .. 1304878 +  -2.6  -3.77278   TTCATATCTTGGGTA          TTTTGTTT AGGATAAA AAACAAAA           TTACTTATTTTTATG  52 370
        nadA 1306031 .. 1306045 +  -4.2  -3.05597   AAATCTGGATTGATA               GGGCTA CAG TAGGCC               GTTTTGGCGGATAAC  47 46
        pnuC 1306927 .. 1306939 +  -7.7  -3.03124   TTGTTGGCACAACGC                TGCAC CCT GTGCA                TGTTGCAGAATCAGG  60 151
CLC90_RS06055 1312032 .. 1312055 + -15.4  -3.92373   GAGTACTGAAAATAA          TAAACCCCGG CTTG CCGGGGTTTA           TTTATGGATACAATC 100 63
CLC90_RS06100 1320737 .. 1320758 +  -5.8  -4.67563   TACGAATTTTCAGAA           CGTCTGGC TACTAT GCTGGACG            TTTTCGTTTCTGTTA  75 156
CLC90_RS06105 NONE
CLC90_RS06110 NONE
        modC 1323607 .. 1323618 +  -3.6  -3.34125   GTGCTGGCGAATCAC                GGCG GCAA TGCC                 TGGTTTTTCGTTGTC  48 201
CLC90_RS06125 1326001 .. 1326016 +  -6.8  -4.15565   TTCAATTTGTTGAAC              CTGCTG CTGC CAGCGG               TTTTCGGCTAATAAA  71 400
CLC90_RS06135 NONE
        bioF NONE
        bioC NONE
        bioD 1331038 .. 1331049 +  -4.4  -3.51232   TGCGCGAGCCAGCGC                CAAC TGTT GTTG                 TTGATTTCGGGACAA  52 350
        uvrB 1334733 .. 1334766 +  -5.3  -3.41878   CAGGAATTTCTTCTT     GTCGCATCCGTAAAT CCTG ATTAATGTGTGCGAC      TTATAAATTAGCCAC  57 186
CLC90_RS06165 1335068 .. 1335095 + -12.8  -3.63092   AGTGTTTATGCTACT        CATTCAGGCTCGC AAT GCGGGCCTGA-TG        TCTTTCTGTCAATGT 100 44
CLC90_RS06170 1337650 .. 1337664 +  -4.2  -5.19275   AATGAAGAAGGTTTA               TCGCCT GTT AGGCTA               TTTTATTTTATCGAT  78 143
CLC90_RS06175 1338732 .. 1338745 +  -3.1  -3.53224   AGGATGGTTTATGAG               CACTG GGCA TAGTG                TTTACGGAGGAAATA  49 27
CLC90_RS06180 NONE
CLC90_RS06185 1340635 .. 1340647 +  -3.3  -3.14211   GATAAGGAATATCGA                CCGCT TCC AACGG                TTGCTGAACCACGAT  46 148
        moaC NONE
CLC90_RS06205 NONE
        moaE 1344153 .. 1344174 +  -8.7   -3.3516   AATCTTAGAATCAGG           TGGGCTATC GTCG GATGGCCCG            TATTCATTGTTCATA  71 104
CLC90_RS06215 1344998 .. 1345019 + -13.1   -5.4251   CTAAGCAACCTGAAA           GGACACGAT TTTA ATCGTGTCC            TTTTTTATGTCTGAG 100 106
        rhlE 1352562 .. 1352583 + -10.9  -5.78622   AGTATTGACTGGAAA           CCGCCTTTA GGTA TAAGGGCGG            TTTTTTTTCGACTAA 100 47
        dusC 1354088 .. 1354100 +  -7.7  -3.83502   TTATTCTTCATCAAA                TGCAG CTC CTGCA                TTTGCTGTAAGCGTC  70 450
CLC90_RS06260 1355885 .. 1355897 +  -4.8  -3.14878   GTTTGGCTCTGGTAT                CCGA GTAAG TCGG                TATTGAGTTAAAGGA  51 18
CLC90_RS06270 1358612 .. 1358622 +  -6.8  -2.84693   ACCGCGTTCTTACCG                 CCAG TTA CTGG                 GTTATTAATCGTCAG  57 7
CLC90_RS06280 1360481 .. 1360491 +  -2.6  -5.06414   CGTATTTTTCCTGAA                 TAAA TTT TTTA                 TTTTTATTCGGGAAA  70 53
CLC90_RS06285 1360914 .. 1360941 + -10.7  -2.78596   TCTATCTTCTTTCAA        GAAAGGTGGCA AAGTCA TGTCACCTTTC         TCTCATAAAACCATC  77 54
        phnC NONE
        phnD 1362844 .. 1362878 +  -8.8  -4.58395   TTGATGTGATGAACA    G-GATAGCTCTGGAA CGCCAT TTCTAGAGCTATCGC     TTTTTAGGCGGTAAG 100 46
        phnE 1363753 .. 1363764 +    -3   -3.1876   ACGGGTTGTGGAGGG                CATT GCCT AATG                 TTAATGAATACACTT  46 16
        phnE 1364706 .. 1364728 +  -5.7  -2.54655   TACCAGATTAACCTG          GTCAGGA-TA AATA TATTCCTGAC           TGGGTTGGCGGTTTT  52 52
CLC90_RS06310 1365538 .. 1365557 +   -10  -3.28712   TGCGGGAAAAGAGAA            GCGTGGCA CTAT TGTCACGC             TTGTCAACAAGCAGG  76 118
CLC90_RS06320 NONE
CLC90_RS06325 1369282 .. 1369299 +  -2.7  -2.85657   TTTATAGTTACTTTT             TTGGACGT GGC ACG-CCGA             TGATTCAGTTTTATC  42 5
CLC90_RS06330 NONE
CLC90_RS06335 1371250 .. 1371260 +  -2.6  -5.00616   TCAGTTCGTACTGAT                 TAAA AAG TTTA                 TTTTTTCACAGGCGC  70 259
CLC90_RS06340 1373289 .. 1373334 +  -4.1  -2.87875   GATAAAAGCAATTAA TTCATTTAT-CTCCCCCCGC AGCCAAA GCGCGGGGAGAATGAATCAG ATGTTTTAGTCTATT  46 26
CLC90_RS06345 1375710 .. 1375740 +  -8.3  -5.03314   GCTGCGAAAATAAAA       GGGTTAAGGACGT TTTGC GCGTTCTTGGCCC       TTTTTTACGCCTACC 100 60
        dinG 1381005 .. 1381025 +  -3.9  -2.52464   ATTCTAACAAAAATA            GCGAGAAGG AAG CCTTGTCGA            TGGATTACCGCAAAA  44 84
        ybiB 1382040 .. 1382050 +  -5.4  -3.06696   GGCCTGTTCTTATTG                 GCAT TTT ATGC                 TATCTTACGCGCCAG  52 84
        rlmF 1383171 .. 1383203 + -14.2  -3.01422   AAAACAGAGCGAAAT     ACCTTGCGGGAGGCA TGAT TGCC-CCCGCAAGGC      TAATTTATCAGGATA 100 143
        ompX 1389579 .. 1389594 +  -6.1   -5.1861   CCAATCCAATAAAAA              TCCGC CTCCGT GCGGA               TTTTTTCGTAATGGA  87 84
CLC90_RS06415 1391341 .. 1391352 +  -2.2  -3.44517   TAACCCTCAGTTTTA                CCAG TATA TTGG                 TCTTCTTCGCTATTG  47 270
CLC90_RS06420 1393251 .. 1393266 +  -6.8  -3.18118   GTATTGTGCAAACGA              GAGGCG ATTC TGCCTC               TATCTTGTGGCATAA  59 77
CLC90_RS06425 1394952 .. 1394980 +   -11  -3.21726   AGTCTTAATCGACTC       TCGTTCCGCGCCA TCCC TGGCGCGGA-CGC        TTGACTCTTCTCCCC  79 33
CLC90_RS06440 1397468 .. 1397497 +  -9.3  -2.83899   TCAGATTAAATAAAC       CAGGTGCTCTTTA GTCA TACTGAGCACCTG        ATTTAATCGCGGGTT  70 12
CLC90_RS06460 1401935 .. 1401946 +    -3  -2.61695   CACAAAATCCGGACG                TGAT CTGC ATCA                 ATGTTTACGCCTGCC  42 153
        folE 1402630 .. 1402646 +  -2.1  -2.65832   CCAGGAATTCCTGCG              CGCGGTG CGT CACAGCA              GTTAATCCTTTTTTG  40 4
CLC90_RS06470 NONE
        galS 1405107 .. 1405126 +  -7.2  -3.62046   TGTAACCGTTTTCAA            TCTGTGAG AAAA TTCACAGA             TTATTAACAAGCTCC  68 54
        mglB 1406577 .. 1406604 +  -2.8   -5.0133   GTTCTTATTTTAAAG        TGGTTTTG-ATCA CCA TGATGCAGAACCC        TTTTTTAGCCAGGTG  70 110
        mglA NONE
        mglC 1409204 .. 1409229 +  -7.7  -5.08367   GTTTACGGTAAAAAA         GCCAGTTGG-AT TGA ATGCTAACTGGC         TTTTTACTTTATATT  95 53
CLC90_RS06510 1413610 .. 1413634 +  -2.8  -2.81584   TTGTTAATTTAACCG          CCGGATCA CAAAGTTCA TGCTCCGG          GGTTTTTATTCTGAC  42 34
CLC90_RS06530 1417365 .. 1417396 +  -8.6  -2.84684   AGTGCTAAATCCAGA      TCATGCCGGTAAGG TTTT CCCTACCGGCAAGC       GATTTTTATTTGACC  64 114
        apbC 1420926 .. 1420937 +  -5.8  -3.57144   ATTGGCGCGTTCTTA                GCAC CCGC GTGC                 TTTGCCCCTCCACAC  59 193
CLC90_RS06545 1421654 .. 1421668 +  -3.6  -3.66095   TTTTCTATGGCAGTT               TTTGTA ACA TACGAA               TTTAAATGGAGATTT  53 62
CLC90_RS06550 1422265 .. 1422282 +  -2.7   -2.7169   AGTCGAATTGATAAA             GACTG ATTCGTGC CAGTC              TGCTCTCCTGTTTAG  41 20
        asmA 1424168 .. 1424209 + -10.2  -3.76837   GATAAATTATAATAT TACG-TCAGGCTGGCGGGA GTGAG TTCTGCCAGCCTGATCGAG TTATTGAATTGTGTC  86 29
        dcuC 1426138 .. 1426148 +  -8.2  -2.52543   GCATCGGGGACTTCA                 CCGG CCT CCGG                 TAGATTACCGGCAAT  60 370
        galU NONE
CLC90_RS06575 1429997 .. 1430014 +  -7.7  -5.26119   TTGTCATCAGTCTTA             GGCAACT TTTG GGTTGCC              TTTTCTTTTTGGCAG 100 257
        gndA NONE
CLC90_RS06585 1431811 .. 1431835 +  -5.6  -5.45802   TATCTCAATAAAAAA          CGCTCGCGAT GATCA GTCGGGGGCG          TTTTTCTTTTGCCAG  90 46
CLC90_RS06635 1440803 .. 1440818 +  -8.2  -3.12999   AATCCATCCATTTTT              CGGCGC TGGC GCGCTG               TTGGATATCAGATAG  64 467
CLC90_RS06650 1443815 .. 1443827 +  -6.9  -3.34715   AAGACGTAATAACTG                CGGCG TGA TGCCG                TGTTTAAGGCGGATC  59 359
CLC90_RS06665 1447897 .. 1447922 + -14.7  -4.96468   TCGTTAAATGAACAA         CAGGGCCGTTG ATAA CTACGGCCCTG          TTTTATTTCAGTTTG 100 56
CLC90_RS06710 NONE
CLC90_RS06715 1459008 .. 1459037 +  -9.9  -3.43187   GGTTATCCATTAATT       TAGCTGGCCGCCA CCCT TGGCGGCATGCTG        TTACTCATTTTTCTC  78 28
        potF 1460577 .. 1460592 +    -9  -3.26814   TGCTGCCTATTTTCG              CCGCAT ATTA ATGCGG               TCTGTTCTGCTTTTA  71 94
        potG NONE
        potH NONE
        potI NONE
CLC90_RS06740 1464132 .. 1464146 +  -2.8  -3.84246   CAACGTTTTTTCCGC               CAGTCA AAA TGAGTG               TTTAGTCGTTGGGGG  52 14
        rlmC 1465466 .. 1465482 +  -2.3  -4.42653   CGCTTATTGCGGGAA              CCATT TGTCGTT AATGG              TTTTATAGCTGCCGT  60 115
CLC90_RS06780 1471071 .. 1471085 +  -3.5  -2.57136   AATGCTGCACAATAG               TGCGT AAAGG ACGCG               GTTGCTGGTTGGTAA  42 362
CLC90_RS06815 1480929 .. 1480943 +  -3.5  -4.29738   TTGTCTTTTTTCTGT              C-GGCG ATAA CGCCAG               TTTTGGTAAATATGG  63 259
        macA NONE
        macB 1485015 .. 1485037 + -11.3  -4.18494   GTATAAAAACAAAAA           TGCCAGTCG AATAG CGGCTGGCA           TTTTGAATCGCAGTG 100 90
        clpS NONE
        clpA 1488329 .. 1488346 +  -9.9  -5.71295   TTGAATAAATGGAAG             GGCGATA GCGA TATCGCC              TTTTTATTTTTCTGT 100 87
CLC90_RS06875 1496003 .. 1496029 + -17.4  -3.26947   TTATTCATACAGTTT         CAGCGCCGAGAA GGC TTCTCGGCGTTG         TTGCTATACCAATTC 100 83
CLC90_RS06880 1499676 .. 1499692 + -15.1  -3.28712   TCATCACGTTATAAA              GGGCCGC ATC GCGGCCC              TTGTGCAAAGAAGCG 100 59
        lolA NONE
CLC90_RS06890 1501826 .. 1501839 +  -3.9  -2.78018   GGTCATTGCGGTAAG               GTTAT CTTT ATAAC                TACTTGGTAAGCGGT  45 44
CLC90_RS06895 1503254 .. 1503270 +  -9.4  -5.47431   GTTAGATGGTAAAAA              GCCTCG AAATA CGAGGC              TTTTTTATGTCTTCA 100 57
CLC90_RS06900 1504880 .. 1504900 +    -9  -4.00782   CATATTCTGAGTGAA            TTCGCCCA GCATA TGGGCGGA            TTTATCGTCATCTGA  78 255
CLC90_RS06925 1512748 .. 1512760 +  -4.1  -4.68384   ACGATGGTCACTGTG                CGAGA CAC TTTCG                TTTTCTTGGATGAAT  68 237
        serC 1513988 .. 1514010 + -11.3  -3.18264   TACTACGCCTTAAAA           TAACCCCGG CATGT CCGGGGTTG           TTGATGAATAAAAGA  84 68
        aroA 1515493 .. 1515523 + -10.4   -3.5774   TAGGGTAACAGTTCT       CGCAGATGCGGCGT ATA ATGTCGCACCTGTG       TTTGCCCGCTTGGGT  82 188
CLC90_RS06940 NONE
CLC90_RS06945 NONE
        ihfB 1518481 .. 1518499 + -11.7  -5.50723   TGTGAAAATACGAAA             CGGTGCC TTTAT GGCACCG             TTTTTCTTTTACTAA 100 69
CLC90_RS06955 NONE
        msbA NONE
CLC90_RS06965 1523871 .. 1523910 +  -3.5  -4.24342   AGGAGCGCAGGCAGA  TTCAGCGCCTGCGCAC AGTCCACGA GTGAGC-GGCGCTGCG  TTTCTTGATACAACG  60 61
CLC90_RS06975 1526034 .. 1526048 + -11.4  -5.32565   TTAAAAATTATAAAA               CCCGCA TTA TGCGGG               TTTTTTCATTAATTC 100 118
CLC90_RS06980 1526374 .. 1526403 + -11.5  -4.13282   GTGATCGCTTTCTAA       AGCAAACGGCTAC CTCG GTAGCCGTTTGTA        TTTTAGCGATGTAAT 100 26
CLC90_RS06985 NONE
CLC90_RS06990 1527764 .. 1527788 +  -4.8  -2.95007   CTTATTTATTCTAAA          CGCCGGGTTG CCAGT CCTCTCGGCG          TCGTTATATTGACTG  50 68
CLC90_RS06995 1528935 .. 1528954 +  -9.4  -3.33162   AAAGAGCATTAGCGC            TTGGGAAA ATTC TTTCCCAA             TTGTGCAGTGGCGTA  69 158
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 1537117 .. 1537136 +  -7.8  -4.77036   GGGAATAAATCAAAA            TGGTCGCT TTCG GGCGGCCA             TTTTTAATGGTGCAA  91 62
CLC90_RS07025 NONE
CLC90_RS07030 1539955 .. 1539975 +  -4.7  -3.35438   ACCGTTTCAGACGGC            GGCTTCA CTGGAGT TGGAGCC            TTATGAAATATCATA  53 66
CLC90_RS07035 1540838 .. 1540854 + -13.7  -4.29106   TGTCATTAACCCCAA              GGGTGCC TTA GGCACCC              TTTATTCATGTGCGA 100 238
CLC90_RS07060 1549829 .. 1549871 +  -4.3  -4.26871   GAGTATTTATCGCCG TCATACCGAAGTAAAAGACA AGGA TGTCTTTCTCTTCGG-ATAA TTTATTAGTGAGTTA  63 52
CLC90_RS07065 1551267 .. 1551298 +    -8  -3.30825   TATTTGTATTGTTTT      CGGCCTAGGGGT TTATTTCT ACCCCTAGCTCG       TCTATATTTTATCCG  66 42
CLC90_RS07070 1552326 .. 1552350 +  -5.7  -2.52623   GGCATGATAAGGACG          TGAGGGTTTAG TCG CCAAAACCTCA          ATATTATCACCGACG  50 380
        rlmL NONE
CLC90_RS07085 1557326 .. 1557373 + -12.2  -5.03314   ACTCAAAACCGCTAA AACCGTTCTGCTGC-CAAAACGT AAA GCGTTTTATGTAGCAGAACGGTA TTTTTTGGCGCTGAA 100 81
        pqiA NONE
CLC90_RS07095 NONE
        pqiC 1561111 .. 1561131 +  -4.7  -4.54026   TCTATTTCTTAATCG            TGGTTGTAT GCA AAGCAACCA            TTGTTTTCTTTCCAG  68 232
CLC90_RS07105 1561367 .. 1561385 + -12.4  -4.54727   TTCGACAGAGGATAA             CCTCCGCT TTA GGCGGAGG             TTTTCATTTCGGGCA 100 52
        matP 1564704 .. 1564718 + -12.8  -5.24129   GGCAGCAAAAAAAAA               CCCCGC AAA GCGGGG               TTTTTTATGAAGAAG 100 83
CLC90_RS07135 1567651 .. 1567663 +  -4.1  -4.42386   AACTTGCTGCAACAC                CAAGG GTT CTTTG                TTTTCTGGATCGGGA  65 143
CLC90_RS07150 1572731 .. 1572751 +  -6.1  -3.96068   CAGATAGCGTTGATA            GTCGGGAAT GGT AATCTCGAC            TTCTTGTTCAAATAG  64 190
CLC90_RS07165 1574826 .. 1574843 +  -2.6  -4.59511   AAACCAATAAAAAAA             CCTGAC GCCAAA GCCAGG              TTTTTCCGCGGTATT  64 141
CLC90_RS07180 1577142 .. 1577173 +  -5.8  -5.07486   TTCGCAGGGCCTTTC      GGGAAAAGGCGATA CAGG TAGCGGCTGTTCCC       TTTTTCTTCGCCGTA  85 134
CLC90_RS07190 1578064 .. 1578076 +  -3.4  -3.69395   TGTTCATTGGCAATA                TCAG CGGTA CTGA                TTGTTAGCTGATAAA  51 350
CLC90_RS07215 NONE
        mdoH 1587140 .. 1587166 + -13.8  -4.36729   CTTCAGTCATTATCA         TGGGCAATGTGT TCT GCACATTGCCCG         TTTTACGTTATTCAT 100 55
CLC90_RS07225 1587758 .. 1587801 + -10.2  -3.06694   GGTGGTGTTACCCAG TGTGCCGTAAAGCCCCGTCC TTCA GGGTGGGGATATAAGGCACG GTTTTCCACCTAACT  76 16
CLC90_RS07235 1589541 .. 1589562 +  -3.6  -3.91506   ACGAGCATAAAAAAA           GCCAACCT AACATC GGGCTGGC            TATTTTTCCGCATCA  58 107
CLC90_RS07255 1594626 .. 1594659 +  -2.5  -5.33785   TAAATTAAGTTTAAT     TTGAGGAATCG CTCTGTTATTTT CGATTCCTCAC      TTTTTTATCATCATT  76 92
CLC90_RS07260 1596001 .. 1596015 +  -2.8  -3.41554   ACCAACCAGCGAAAT               CTGCAA TAA TTACAG               TTAAATTTATTCTTG  48 268
CLC90_RS07295 1601164 .. 1601209 +  -9.9  -2.98665   TACCTCCATGTTCTA ATACTGTGTTATTTCGCGGAG TTTT TTTAGCGAAATAACACAGTGC TGATTGTCTTATCTT  73 41
CLC90_RS07300 1603131 .. 1603165 +   -15  -3.16492   AGGCAGGAAAAGAAA     AGGCCTGAGTTCTGTG AAG CACAGCGCTCAGGCCA     TATTAGTCACTCTAA 100 162
        rluC 1608462 .. 1608486 +  -6.5  -3.52164   CCCCGCACAATTCCA          CGGTTGTTCAA GGG TTAAATAACCG          TCTATTTCTTTATCA  61 298
        yceD NONE
CLC90_RS07330 1609760 .. 1609777 +    -2  -3.49475   ACTTGCTAATCATTA             G-CAAGG CGATA CCTTGAC             TTGTCTAACCCTAGC  47 46
        plsX NONE
CLC90_RS07340 1611743 .. 1611753 +  -2.4  -2.98982   CGGTGGCTTTACTTG                 GGGC TCT GCGC                 TGGTTCGTTTTTGAT  42 1
        fabD NONE
        fabG 1613600 .. 1613613 +  -2.3  -4.25848   TAAACTACGAAAACC               ATCGC GAAA GCGAG                TTTTGATAGGAAATT  58 144
CLC90_RS07355 1613883 .. 1613907 + -10.8  -5.40072   AGTAAGCGAACATAT         C-TAGGCGGTC ATTC GACCGCCTAAG          TTTTTTTGCCCCAAC 100 36
CLC90_RS07360 1615226 .. 1615239 +  -9.5  -5.65177   CAGATAATAAAAAAA               CCCGG TTAT CCGGG                TTTTTTTATGCCTCT 100 58
CLC90_RS07365 NONE
        mltG NONE
CLC90_RS07375 NONE
CLC90_RS07380 NONE
CLC90_RS07385 1619754 .. 1619777 +  -5.3  -2.91061   TAAACGAGTAATGTT          TCCACCC TATTTATAAC GGGTGGA           CGTTTTTTATTGACA  52 71
CLC90_RS07390 1621468 .. 1621483 + -10.4  -5.61824   CCGGGGAGTGCAAAA              GGAGGC GAAA GCCTCC               TTTTTTTGCGTTTTA 100 47
CLC90_RS07395 1622112 .. 1622122 +  -3.2  -3.40403   AATAGTTGGGTAGGC                 CGTC AGT GATG                 TTATCCTGCCCGACC  47 36
CLC90_RS07400 NONE
        lpoB 1623188 .. 1623218 +  -5.4  -4.09243   CGTGGATAAGTACCC      TGATA-CCGGCGG ATAATA CCGCCGGTTGCCA       TTTTAGCCCAGTATC  65 55
        thiK NONE
CLC90_RS07415 1625095 .. 1625113 +  -4.5  -2.72991   GGGAACTAAGTCACG             CATCGGG GAATA TCCGGTG             TGGTTGACCCTGTCG  48 32
CLC90_RS07420 1625707 .. 1625741 + -18.1  -5.27335   AACCTGATGACAAAG     GCCCAAAAAGATCGT TCACC GCGATCTTTTTGGGC     TTTTTCTTTCGCAAA 100 47
CLC90_RS07425 1627381 .. 1627416 + -14.2  -4.37092   ACACCTTCGGTAGCA    CAGAAAACCGTTGTCA TTCG TGGCAGCGGTTTTTTG     TTTTATCACGCCGAT 100 75
CLC90_RS07430 1628360 .. 1628377 +  -5.5  -3.90291   AACAGAAAGTAGGGA             CAACGGG CAAA CCGGTTG              TTTGGTTAAGCGAGT  61 106
        lolC NONE
        lolD NONE
        lolE 1635362 .. 1635372 +  -3.2  -3.35996   GGCAATAAATGACGA                 GTCA CCA TGGC                 TTATCAATACGAGTA  47 33
CLC90_RS07460 NONE
CLC90_RS07465 1637265 .. 1637279 +  -6.4  -4.52589   GCAGGGGCATCATTA               TGATGC CTC GCGTCA               TTTTATGTCAGCGGG  74 65
        pepT 1638703 .. 1638729 + -12.2  -3.09925   GCTTCAACAAAAAAA         CGCCCCTAAGGT AAA ACCAAAGGGGCG         TAGTTATTTCTATAT  86 63
CLC90_RS07520 1648849 .. 1648874 +  -7.5  -4.64598   ATAGTTTGATAAAAC         TTCACGGGGGC TTAT GCTTCCGTGGG          TTTTTCAACTAGTTA  81 46
CLC90_RS07525 1650666 .. 1650679 +  -5.3  -3.34902   CTCGATTCGATATAG               TTACC TTCC GGTAA                TATTATATCGTCGAA  54 373
CLC90_RS07540 1655734 .. 1655753 +  -7.8  -3.00825   AACCCATATGACAGA            GGGGCATG AATG TGTGCCCC             ATTATATTTTATGGA  62 39
CLC90_RS07545 1657117 .. 1657127 +    -4  -3.70104   AAATAAACTTGTCGA                 TTGT TTC ACAA                 TTATCTTACATGATT  54 373
CLC90_RS07570 1661473 .. 1661502 +  -9.3  -2.52635   ATGTATCCAATAGAA       GCCGCTATTGTGA CCAG TTGCCATAGCGGC        CTTGGTGGTACCGGT  68 90
CLC90_RS07590 1667047 .. 1667063 +  -5.9   -4.0641   GTAAGAAGAGTGAGC              GATCAGA TGT TTTGATC              TTTGTGTCAGTCCAA  66 496
CLC90_RS07595 1669045 .. 1669065 +  -7.6  -4.57482   TTAAATACCGCCACT            GGCTGATT AATTC GATCAGCC            TTTGTTTATCACTCG  82 51
CLC90_RS07600 1669721 .. 1669751 +  -4.1   -3.0873   GGTGTCATTGTGCTA      CGTCGAGTACAGGAG TGA TTTCTG-AC-CGACG      TATTCCCGTGATTTC  49 8
CLC90_RS07605 NONE
CLC90_RS07610 NONE
CLC90_RS07615 1674601 .. 1674637 +  -5.2  -2.61582   CCTAAGCAAAAATAA   GTCTTTGCGCCCTACTCG GTT CGAGT-GGG-GCAATCAC   CTTATGGGTCAAATA  49 327
CLC90_RS07620 1675587 .. 1675611 + -15.7  -4.24342   TCGTATTGATGGCAA          GCCGATCGGGC AAT GCGCGATCGGC          TTTATTCATGACAGG 100 32
CLC90_RS07630 1678008 .. 1678019 +  -2.2  -4.49939   AGTGTAGGTGAAAGT                C-GCG CTT CGCTG                TTTTCTAGGTTGTGT  60 389
        phoH 1679428 .. 1679448 + -13.3  -3.58726   AAATTAATGCCAAAA            GGGCAAGCG CTA TGCTTGCCC            TTGTCTATCCAAACG 100 61
CLC90_RS07670 1688083 .. 1688104 +  -5.7  -5.76949   TTCAGTAGCAAAGAA           CCGGGTGCC AAAA GTGACCCGG            TTTTTTTTGGCGATA 100 52
CLC90_RS07675 NONE
CLC90_RS07680 NONE
        astD NONE
        astB NONE
        astE 1695228 .. 1695244 +  -2.3  -3.09671   GTGGGCTAATAATTA              TTATCAA CAA TTGTTAA              TGTTAACCTTGCACT  43 228
CLC90_RS07700 1696897 .. 1696912 + -11.8  -5.26316   ATTGGTGCATAAAAA              GCGGGG ATAT CCCCGC               TTTTTTATCCACTAA 100 81
CLC90_RS07720 NONE
CLC90_RS07725 1702348 .. 1702363 +  -4.6  -4.74706   AAATATAGTCATAGC              GCGGCA AATC TGCCGG               TTTTTCAATATTGGG  73 415
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE NONE
        flhA 1725327 .. 1725342 +    -9  -4.09739   AACTGCCCCCTTAAT              CGTTGG GTAT CCAACG               TTTTGGGGCAGTTCA  83 310
CLC90_RS07835 NONE
        pefC NONE
CLC90_RS07845 NONE
CLC90_RS07850 1730613 .. 1730637 +  -6.3  -3.09273   GCGTAGAGCTTCAAC          CTGTGGAGCCG AAC TGGATCCCCAG          TGTGTATTCGGCGAC  57 418
CLC90_RS07855 1731356 .. 1731366 +  -2.6  -3.19668   TACAGTACGTAAAGT                 TATT TAC AATA                 TTGGGTTACATAATG  44 50
CLC90_RS07860 1732696 .. 1732713 + -11.3  -4.14013   ATATAAAAGGAAAAA             TCCACGC AATT GCGTGGA              TTTTAAAGAGTTTTA 100 303
CLC90_RS07870 1734617 .. 1734651 +   -10   -2.7644   TTATTGGCAATGATG     ACCGATTCTCCGGC TATTGGT GCCGGAGAATCGCA     ATTTAGGCGTTGGCT  72 51
CLC90_RS07880 1735941 .. 1735966 +  -8.9  -5.69262   CCCAAGAGTAGAAAG         CCCGTTGTTGC TCAC GCTTCAACGGG          TTTTTCTTTTTCTGC 100 145
CLC90_RS07900 1740200 .. 1740210 +  -6.8  -2.73969   ACGCGACAGCCTTGG                 GCTG GAT CAGC                 ATTAGTTTCCTCAAT  57 10
        prfA NONE
        prmC NONE
CLC90_RS07915 NONE
CLC90_RS07920 1743420 .. 1743431 +  -3.6  -2.82933   TACTGACTGGATACG                GCGT TGTG GCGC                 TGTCATGAATTCCGA  45 41
        kdsA 1744361 .. 1744389 + -11.7  -5.20216   AAACGGGTAAAAAAA        GGGCGATGTAGTG AAA TACTACGCCGCCC        TTTTTTCATGCTCTG 100 61
CLC90_RS07935 1747833 .. 1747853 + -16.9  -4.27617   GCGGCAAAAGCAAAA            GGCTCCGAC GTT GTCGGAGCC            TTTTGCTCGAATATG 100 57
CLC90_RS07955 1751364 .. 1751386 +  -4.1  -3.16177   ATTATTCAGATTTAG           GGCGGAG TTTATTTCT CTTCGCC           TTGCATCTCTCCGCT  49 50
        ghrA 1752424 .. 1752438 +  -3.5  -2.78384   TTTTGGCTCGGCTGG               GCGGA CGATT TCTGC               TATGCTGAGCGGACG  45 62
CLC90_RS07965 NONE
CLC90_RS07970 1753907 .. 1753929 + -14.9  -3.14218   GCTAATGTCTGAATA           TAGCCCGCC ATTTC GGCGGGCTA           TCGTTTTAGTCGGTA 100 55
CLC90_RS07990 NONE
CLC90_RS07995 NONE
CLC90_RS08000 1758813 .. 1758830 + -12.7  -3.53779   ATCGGGTTGCACTGA             CGCCTGC TTTT GCAGGCG              TTGATATTTTCAGCG 100 118
        murJ 1760455 .. 1760470 +    -9  -5.51402   GAGGTAATATTTCAA              CCCGAT AATG ATCGGG               TTTTTTTACGTCTAT 100 80
CLC90_RS08010 1762589 .. 1762605 +  -4.5  -3.12668   TATCAAAACGAATGG              GAAAAGA TGA TTTTTTC              TATTCAACTTTACCA  51 262
CLC90_RS08015 1767068 .. 1767100 + -14.3  -3.40299   TAAAATTTCTGAACC      TAAATGCCAGTCGAT GAT AACGGCTGGCATTTA      TTGTCGGTATCGTCA 100 56
CLC90_RS08020 1768028 .. 1768041 +  -9.5  -4.74801   TATCATTAACCTCAA               GGCCC ATTA GGGCC                TTTTTAGTCAAATTC 100 225
CLC90_RS08030 1770877 .. 1770889 +  -7.7  -3.47078   GTCAGGTCGTTGAAC                CCTGT TTT ACAGG                TTGTGATATGAGCTG  68 197
        cutC 1771703 .. 1771728 + -13.3  -2.71712   TCAGCCTGATATAAC         CAGCCCCGAAA ATGT TTCCGGGGCTG          ATTTACCGCCAGCAA  93 32
CLC90_RS08060 NONE
        aspS NONE
CLC90_RS08070 1778179 .. 1778192 +  -5.3  -2.71681   GTGAGTTCCGATAAA               CTTAC GTCA GTAAG                TGATTCGGCGAGTTG  49 37
CLC90_RS08075 1779049 .. 1779073 + -13.6  -4.44608   CAGCGCTGTGAAGTC          GCCGTGCTCA TTGAT TGGGCACGGC          TTGTTTTTAGGTGGA 100 57
        ruvC 1779699 .. 1779718 + -12.2   -5.5208   GGGTTTATCGCCGAG            GGCTGGAT ATCC ATCCAGCC             TTTTTTGTGTTATAA 100 76
        ruvA NONE
        ruvB 1781468 .. 1781493 + -13.3   -2.9856   CAGCGGTGATATAGC         GCGGAGCCAAG CAAT CTTGACTCCGC          ATTATTTACCCTTTA 100 65
        znuA NONE
        mepM 1787435 .. 1787451 +  -5.2  -3.75766   AACCTGATATCCGCT              TTATGC GATCA GCATAA              TTATTGCATTCTCAA  61 150
        msbB 1788514 .. 1788538 +   -10  -5.45652   ATAAATAAAGAAAAA          GCCAGTCAAC TTCTC GCTGACTGGC          TTTTTTATTAGCGAT 100 65
         zwf 1793105 .. 1793117 +  -3.3  -4.56597   TTCCTTGGGACTTCG                GCTGG GTG CCATC                TTTTTAACCAACGCC  63 232
         eda 1793899 .. 1793925 + -10.2  -5.44119   GCTTTAGTCGAAAAA         CAAAACCTCCAA ATT TAGGGGGTTTTG         TTTTTTTGAAATAAC 100 77
        mdtJ 1794819 .. 1794834 +  -3.2  -2.58579   CAAGTCAGGTGGGGA              TCATGC AGCA GCTTGA               GTTCTACCACATTGC  42 10
        mdtI 1795280 .. 1795301 +  -2.9  -6.25741   GCCAGCCGTCTGAAG           GTAGCCGGT CAAA ACGGGGTAC            TTTTTTTTATTCTTT  95 155
CLC90_RS08160 1797742 .. 1797753 +    -3  -4.72272   TGCGCGCCCTGTGTT                GAAT ATAG ATTC                 TTTTTCCTGCCGAGG  65 69
        tsaB NONE
CLC90_RS08170 1799148 .. 1799171 +   -11  -5.75342   ATATGAATCAATAAA          CGGATGCCGA GTTT TCGACATCCG           TTTTTTTTACGGCAA 100 57
        fadD 1801285 .. 1801314 + -20.9  -3.03214   TCACAGGCTCATCAT       CAACAACGCCGGT AAAC ACCGGCGTTGTTG        TGTCTGTCATAGGTT 100 50
CLC90_RS08180 1802651 .. 1802678 +  -8.5  -3.83502   CCAATAGAATTCAAG        CATCCCCTGTA AATAAA TACAGGGAATG         TTTGATATGCCGATA  75 204
CLC90_RS08200 1805545 .. 1805556 +    -3   -3.1247   TGGCGGATAGCATGA                CAAT GAGT ATTG                 TTGAATATCGGCACT  46 133
CLC90_RS08205 1806326 .. 1806343 +  -5.5  -2.51547   CATCCCAGACAGCGC             GCGGGTG GCAA CACTTGC              ATCTTCGTGTCAAAA  49 54
CLC90_RS08210 1807048 .. 1807063 +  -5.4  -2.69849   CGAGCTTAGTGCCCA              GCATGC AAAA GTATGC               CTCTTTGAATTCTTC  49 224
CLC90_RS08220 1807913 .. 1807942 + -18.1  -4.09685   ATATTATTCTGAAAA       TGATAAAGGTGCC ATTT GGCACCTTTATCA        TTTTCAGAACTCACC 100 76
        fadR 1811408 .. 1811422 + -11.4  -2.93703   TGTCAGCAGTCTGAA               GGAGCC GTT GGCTCC               TATCTCGATGGTTGT  83 188
CLC90_RS08245 1814803 .. 1814827 +    -7  -3.26471   CTTAATGACCTGCCA          GGAGGCCAGC CCAGT GCTGACCGCC          TTGGTGTGCGCCTGC  61 45
         alr NONE
        budA NONE
        alsS 1824925 .. 1824942 +    -7   -5.4505   AGAACCCACTAAAAA             CCGACT AACATC AGTCGG              TTTTTTATTAGGCAG  91 139
CLC90_RS08295 1828946 .. 1828976 +  -5.4  -3.66028   TATGAGCGAGTCATG       CCACTAAGATTTAC CTT GAAAATCATCGTGG       TTATTGCGAGTTATG  59 311
CLC90_RS08300 1830128 .. 1830140 +  -3.3  -3.86307   TAAAAGTGAATGATG                GCAGA GAT TCAGC                ATTTTTTGTTAAAAC  53 334
CLC90_RS08305 1831954 .. 1831970 +  -9.4   -5.1244   ATGTCAGCAATCTGA              TGGGGC GTAAA GCCCCA              TTTTTGTCTTGGTGC 100 205
        msrB 1834839 .. 1834862 +  -2.4  -3.66908   TGGCGATCAGGTGGC          CGGTTAATCA GTGA TGATAAAGCG           TTAATTTTCAGAAAA  49 19
CLC90_RS08325 1835372 .. 1835389 + -11.3  -4.33274   GTTATTACCGTTAAA             CCGAGCT AATT AGCTCGG              TTTTCGTGGTATCCC 100 207
CLC90_RS08345 1839775 .. 1839806 +  -3.8  -4.26622   TAAACTTTTCTTGAT      GCAGCTTAGGTCAAA GAT TGTGAA-TAAGCTGC      TTTTCCGTCTGCTTT  63 38
        selD NONE
        topB NONE
CLC90_RS08360 1843446 .. 1843460 +  -5.7  -3.76224   GTAAATAAATTCTGC               GTGAC GGTAA GTCAC               TTTGCTGGCTGGCAA  61 197
CLC90_RS08380 1847030 .. 1847045 +  -6.8  -4.32177   ACACCTTTAATACAA              CTCCTC GCAG GGGGAG               TTTCTTATAAGATGC  74 83
        rssA NONE
        rssB 1852342 .. 1852361 +  -3.6  -3.70051   TCTATTCCCGTATCT            TAAGGTTT TATT AATCCTTA             TCTTTTAGACTATTT  53 144
CLC90_RS08420 1854606 .. 1854624 +  -6.6    -3.922   ATTGATATTTAGCCG             GACGAGCG GCA CGCTTGGC             TTTGCTTGCAACTTT  66 505
CLC90_RS08430 1856450 .. 1856488 + -10.3  -2.66787   TGGGGGACACAAAAA   GAAACCCCCTCAATCAG GAAGG CTGATTGAGGGGGTGGA   TAATCTACCTATTAC  74 249
CLC90_RS08440 1859893 .. 1859905 +  -3.4   -3.0806   TGTGCGGAGTGATGT                GTGA GTCAA TCAC                TGTTGGACCTTTCGG  46 297
CLC90_RS08450 1860550 .. 1860580 + -10.4  -5.32944   TAACCATTCATTATA       CCGGTCAGCGGA TGATTGC TGCGCTGGCCGG       TTTTTTACTTGTGCA 100 38
CLC90_RS08455 1862992 .. 1863002 +  -4.6  -3.37493   ATAAGGTGTAATTTC                 CGGC TGA GTCG                 TTCCTCTGTTGGAAA  53 119
        oppA 1864747 .. 1864770 + -13.2  -4.39998   ACTAATCATCTTGAG          GGCAGTTTCC TACG GGAAGCTGCC           TTTATTATATCGATA 100 36
        oppB 1865723 .. 1865737 +  -2.8  -2.56715   ACGTGTTATATGCCG               TTATCG ATC CGAAAA               TCCGTTACTGACACT  41 0
        oppC NONE
CLC90_RS08475 NONE
CLC90_RS08480 1868710 .. 1868735 +  -8.9  -5.80727   TTTAATGGCAAAAAA         GCCCCGCCATT TTGC ACTGGCAGGGC          TTTTTTCTTATTTTT 100 52
CLC90_RS08495 1871197 .. 1871227 +  -6.3  -5.59879   AACGGAAGAGAATAA       TAAAAACAGTTCT GTAAA GGGGCTGTTTTTA       TTTTTTCTATTTATA 100 39
CLC90_RS08500 1872448 .. 1872475 + -14.3  -2.94527   CCGATAAGCATTTTA        TTGGCAGGAAC ATGCGC GTTCCTGCCAA         TCGTTATCTCTATTG 100 41
CLC90_RS08515 1874890 .. 1874900 +    -4   -4.5265   TTATCAAAAGTCATC                 TCAA CAT TTGA                 TTTTATGATGTAATT  68 448
CLC90_RS08530 1877561 .. 1877571 +    -4  -2.72639   CGTTTTGGACTAAAA                 TGAA TTT TTCA                 GGTTTTATTTAATAA  45 183
CLC90_RS08535 NONE
CLC90_RS08540 1880996 .. 1881008 +  -6.9  -3.25088   GCATAAAACAGCACG                CTGGC GAA GCCGG                TTGCTGCATTTGAGA  61 44
CLC90_RS08545 1881476 .. 1881494 +  -3.1  -4.20806   GCTGCGGTGTTATTA             CCCTG AAGGAATGA CAGGG             TTTCATTTTACAATA  58 20
CLC90_RS08550 NONE
CLC90_RS08555 1883252 .. 1883269 +  -3.3  -3.46647   TTATGCATTGAGTAT             GCTGCAT GGTT GTGCCGC              TATTTAGTGGATAAA  49 185
CLC90_RS08560 1884303 .. 1884330 +   -15  -4.39571   TCGGTTATTAAAAAA        GGGTCGCATGTGA ATT TCAC-TGCGACCC        TTTTACATTTGTCAC 100 80
CLC90_RS08575 NONE
        ompW 1889695 .. 1889715 +  -9.7  -4.78597   TCTGGTTAAAAAAGA            GGAGGCG CATTAGA CGCCTCC            TTTATTTATTGTTGA 100 57
CLC90_RS08630 NONE
CLC90_RS08635 1899235 .. 1899260 +    -4  -3.43553   TACAGGCAACAAAAA         GGCTCAC-CGA TTAAC TAGAGTGAGCC         TCTTCTATTAGATTC  52 372
CLC90_RS08645 1902094 .. 1902104 +  -2.4  -3.63569   TCAACCGGTATTCTT                 CCGG CGT CAGG                 TTATTCAGGGATTCA  50 261
        rluB 1904480 .. 1904507 +  -9.2  -4.53303   AAAGCGGTTAATCTG        ATTGCCGCAG-AC CGA GTGCTGCGGCAAA        TTTTCTCTCCGAATA  95 42
        sohB 1907385 .. 1907410 + -11.1  -4.39426   GCTATTAATAGAAGA         AAGCAGGGGGC TGAT GCCCCCTGTTA          TTTTATGACGCTCTG 100 74
        topA 1910788 .. 1910804 +  -5.8    -5.626   TCTCAGCATAAAAAA              CCAGTC TTAGT GGCTGG              TTTTTTTATGGGCTA  95 65
        cysB 1912424 .. 1912434 +  -4.6  -4.98531   TGATAAACCACTTTC                 CTCC TAC GGGG                 TTTTTCATTTAAAAA  77 353
CLC90_RS08695 1913409 .. 1913432 +  -3.2  -5.76633   CTAAATTATCCCAAA          CACTGGAG-AT GAT ATCCTTCGGTG          TTTTTTTATGTGTAC  91 227
CLC90_RS08705 1914695 .. 1914711 +  -6.5  -2.80988   AACAACGTACGCAGC              GCGGATG TTT CATCCAC              TGATTGATCATATGG  55 2
        acnA 1917638 .. 1917655 +  -8.3  -5.14563   ACACTGTAACGAAAA             GGGTGGG CTGG CCCCCCC              TTTTTTGCTGACAGA 100 48
CLC90_RS08720 1919409 .. 1919423 +  -3.5  -4.12841   TATCATACAAGTAGG               CTGTC ATAGC GGCAG               TTTCTCATTACTTTT  60 103
CLC90_RS08725 NONE
        lapB 1921540 .. 1921567 + -12.9  -3.18264   TCATATAAGCGAATG        CAAAAAGAGCG ACCAAG CGCTCTTTTTG         TTGATGCCTACCGGA  95 488
CLC90_RS08745 NONE
        yciH 1923332 .. 1923358 + -12.4  -4.34402   GTTGAATATTGACGT         CGGCCATATC CAGTGCA GATATGGCCG         TTTTGCTGTGACAGA 100 36
         fsa 1924904 .. 1924935 +    -8  -4.37886   TAAGTTCCTTTACCG      GCAGATTTCGCG CGATACAT CGCGGCATCTGC       TTTTGTCAACAATGC  78 209
CLC90_RS08795 1933901 .. 1933914 +  -9.5  -3.54424   ACCCGTGCAATGGCA               GCGGC AACC GCCGC                TTTACGCGGGTCGAC  74 183
        tehB NONE
CLC90_RS08830 1942334 .. 1942346 +  -4.1  -3.35349   TACTCCCGCGTTAAT                TCATC TCT GGTGA                TTATCCCGATTATTT  51 27
CLC90_RS08835 1943454 .. 1943503 +  -8.8  -4.65969   CAGGCGGATACATTG CC-GTGACTAAAACAGGATCGGA TAATT TACGATCCTGTTTTAGCTATTGG TTTTAGTTATTTGTT 100 20
        fumC 1949463 .. 1949489 +  -9.4  -3.78736   ATTCTGCATTTATTA         CACGCTGGCATT AGG ATTACCAGCGTG         TTTACTGCGTCTGTG  81 52
CLC90_RS08865 1952449 .. 1952459 +  -3.2  -4.19177   AAACGGCAAAATTGC                 GGAG TAA TTCC                 TTTATGTTAACGCGT  58 266
        bioD 1953502 .. 1953524 +  -4.8  -3.57263   GGTGCGCCGGAACCA           CTACTGGC TAATACC GCCAGCAG           TTTACAGATCAAAAT  55 396
CLC90_RS08890 1955967 .. 1956003 + -10.2  -3.14132   GAATACGTCCTTGTA   GGCTCGT-TCTGCGCCA TTTC TGGTGCGGATACGGGTC    TTCCTCCACCAGAAA  77 138
CLC90_RS08905 1959305 .. 1959332 +  -5.7  -4.74801   TTTAATGGCTGAGAA        TAAGCTAATAC AAAAGG GTGTTAGCTTG         TTTTTCATACCATTC  78 108
CLC90_RS08910 1960203 .. 1960217 +  -5.7  -3.55444   CTCTACTTTTAGCTC               TGGCA CTGAT TGCCA               TTTGCAGCGTCACGA  59 416
CLC90_RS08915 1961419 .. 1961431 +  -9.1  -3.28712   GGGCAGTTTAATTTC                GCCGT GTA ACGGC                TTATCAGAAACACAG  69 312
CLC90_RS08925 NONE
CLC90_RS08930 NONE
CLC90_RS08935 1969960 .. 1970002 +  -8.5  -3.73122   TATCACCGTGACTTA TTG-TCCATCAACGCCGCTA ACTT TGGCGGCCTTGATGGAACCG TTTGGGGTTATTCTC  73 63
CLC90_RS08955 1973931 .. 1973955 +  -7.3  -3.18681   CAGCGTTCGTGCTGA          CTGCTATTA ATCAGGC TAATAGCAG          TTGCTGCAATTCAGA  62 73
CLC90_RS08975 1979012 .. 1979032 +  -3.9  -3.29461   GAGGGTTATCTTTTA            GCGCGCTAA GTG TTGTTGCGC            TTATCAGACGCCTTA  49 17
CLC90_RS08980 1979854 .. 1979890 +    -6  -3.79482   CGCTGTAACATATGA    TGCCAGATTAATAACT CACTT ATTTATTGGTCTGGCG    TTCTCTTCTCCTGTT  63 33
        uspE 1981368 .. 1981378 +  -6.8  -3.60792   CAACACCTCGATCTC                 GCGA GTG TCGC                 TTTGGAAGTTGGCCC  61 459
CLC90_RS09000 NONE
CLC90_RS09005 NONE
CLC90_RS09010 1986442 .. 1986456 +  -8.6   -2.7083   GCAACGTTAGCCGCC               GACTGA CAA TCAGTC               TCGCTTTCTACACTC  63 31
CLC90_RS09015 NONE
CLC90_RS09020 1988099 .. 1988122 + -10.4  -5.98675   TTGTCGGCAAAAAAA          TCCGGAGGCAA AAG TTGC-TCCGGA          TTTTTTATTTTTATC 100 42
CLC90_RS09035 1992615 .. 1992637 + -15.6  -3.63991   TTCAAATAATTGTAT           TGGGGCAGCC TTC GGTTGCCCCA           TTCTTCCCACTGATG 100 32
CLC90_RS09040 1994369 .. 1994381 +  -4.7   -3.1855   GCGTTATTTTCCCTT                AGCGC ACC GCGCA                TTGAATATTAAAAAC  51 131
        rstA NONE
        rstB 1997947 .. 1997973 +  -2.9  -3.76411   ATCCGGATCAAAATG        TCCTCCGGCAGC TCCG GCTGC-GATGGA         TTTACCTCCTTTTAA  51 476
         asr 2001505 .. 2001523 + -11.7  -4.65895   ACCTGACTCACTCAA             CACCCGG TTATT CCGGGTG             TTTTTCCATCGGGGG 100 73
CLC90_RS09085 2002881 .. 2002901 + -11.9  -3.14344   ATCCTGTGACCGGTC            TGGTGGCAA TTT TTGCCGCCA            TTGCTGCCAAACCTG  79 288
CLC90_RS09095 2007568 .. 2007585 + -12.7  -5.28176   AGGTTATCTCTGATT             GCGCACC TTTA GGTGCGC              TTTTTTATCGCTAAC 100 93
CLC90_RS09110 2009352 .. 2009364 +    -2  -4.19238   GCATTCTTGCGCGTA                TTCA CACCA TGAA                TTTTCGACTTGAGCG  57 379
CLC90_RS09120 2013042 .. 2013068 +   -13  -4.28548   GCTGTCAGAGTGATC         ATCAGGGTGTGC TAT GCGCACCCTGAA         TTTTAGTCAATCGGT 100 51
        hslJ 2014201 .. 2014215 +  -5.6  -3.16742   ATCTGAGCCATTCCA               TCCGCG TCG CGCGAA               TTAATCAAGATTGGG  55 441
CLC90_RS09135 2015169 .. 2015183 +  -2.8  -4.33274   GTCATGCCAAGAATC               GCTG CCCAATC CAGC               TTTTGCTGATATAAA  62 146
        nifJ 2019429 .. 2019466 + -12.3  -4.77036   TGATGTGCTGAAATC   GATAAAGTGATCAGTCA GTGA TTATTGATCACTTTATC    TTTTTGGTACTAAAA 100 88
        mpaA 2024940 .. 2024959 +  -2.8  -3.62597   TTCAGTAAGGTTTCA            TCTTTACC CGCG GGTAACGG             TTGTTCCAACATCGC  51 382
CLC90_RS09175 2026244 .. 2026262 + -14.6  -3.83006   GTTGGTATAATGAAA             CGGCTGAC ATT GTCAGCCG             TTATTGATTGACTCT 100 48
CLC90_RS09185 2028625 .. 2028637 +  -6.3  -4.00782   CATGGGGTCTTTTCG                TGACA GGA TGTCA                TTTGTGATGCTCTAC  67 23
CLC90_RS09190 2029170 .. 2029180 +  -5.4  -3.97947   TGACGGCGAAAATCG                 CCAA GTT TTGG                 TTTATCATCACTCAG  64 96
CLC90_RS09225 2034811 .. 2034823 +  -4.9  -3.23018   CATTAATAACGTGAG                TATCA AAC TGATA                ATTTTCATGTATGCC  50 431
        sapA NONE
        sapB NONE
        sapC 2039861 .. 2039875 +  -4.2  -3.12327   GCGATTATTGAGGGA               GTGGAA TAA TGCCAC               TATTAGATATCCGCA  49 17
        sapD NONE
        sapF 2041720 .. 2041742 +  -9.1  -4.15044   AGCACCATATTCTGT           CCGGGCG TGCTAGAAT CGCCCGG           TTTATTAACGCAAAA  83 69
        fabI 2042705 .. 2042727 +   -12  -4.17701   CAAAGATTATTCGAA           TCCGCTGTGG TCA TCGCAGCGGA           TTTATCATTTCTCCC 100 95
        dtpA 2045190 .. 2045220 + -12.7  -4.19238   GTTTATCGTTAATCA       CCAAAGGCACC AACCTGACC GGTGCCTTTGG       TTTTACGATTAAACG 100 53
CLC90_RS09285 2047865 .. 2047881 + -13.7  -2.70932   GTAGCGCGGTTTAAC              CCGTCCG TAA CGGACGG              TCATTGACGGGCAAG  93 201
CLC90_RS09290 2048521 .. 2048559 + -14.6  -3.22943   TAAAACCCTTACCTC   AACACCGTTCTCCGTAGA TAT TCTACGGGGCGCGGTGTA   TCTCTATTTCATCTT 100 49
CLC90_RS09295 2049353 .. 2049366 +  -3.8  -3.93369   ATTCAACCATTATTT               GGCT ATTAGC AGCC                TTTGATTGAGATTAA  58 90
CLC90_RS09300 2049777 .. 2049794 + -12.7  -2.67055   CGCATTTATCAGGCA             GCGGAGG ATAT CCTCCGC              TACTATAACTATTAT  88 74
        gstA 2050651 .. 2050666 +  -3.2  -3.21218   CGATCTTGTCCTGCG              CAGCAA CCAC TTGCAG               TTCATACTCGCCCAT  46 139
CLC90_RS09330 2055860 .. 2055902 + -13.6   -4.3586   ATTTAAGTTGCGGAC GTAAAAAAACCGAGGCTC ACACGAC GAGCCTCGGTTTGTTTTC TTTTGCTGTGAATAG 100 40
        eptA 2060783 .. 2060794 +  -5.8  -3.12749   TTTGCTCTTGACCTA                GACC GATC GGTC                 TATTACGCTTCTTGG  55 125
CLC90_RS09360 2061465 .. 2061479 +  -4.3  -3.14881   GGTTTATACAAACAC               TAGAC GACTG GTCTA               TTAATACAGGAATTA  49 77
CLC90_RS09365 2062641 .. 2062665 + -10.7  -5.69068   GATGCTTTGCATCAG          GCCGGTTAGCC ATT GCCTAATCGGC          TTTTTTATATTTTTC 100 69
        gloA NONE
CLC90_RS09375 2064090 .. 2064119 + -12.3  -3.48276   TAGATTGCCCGTGAT       AAAAATAGGTGGC CGGA GCCACCTATTTTA        TTGTATCCACACCAA 100 91
CLC90_RS09385 2065906 .. 2065926 +  -2.5  -3.54256   GCTTCTCGCTAATCA            CTTAAACTC TGC GTGGTTAAG            TCTGTTTTTCCGCGT  48 119
        sodB 2066660 .. 2066680 + -11.1  -3.45768   AATCACCAAGATAAA            GGGCGGATA GAT TCTCCGCCC            TTCTCACTTATCGTC  83 47
        purR 2068459 .. 2068476 +  -6.2  -3.44325   TCCGGTTTGCCAATC             CGGTGC CACTAA GCGCCG              TTGGTTATCCAGCGT  59 323
CLC90_RS09410 2070759 .. 2070781 + -13.5  -3.00816   CTTATGGATGAGTCC           CCTTGGTGC CAAGC GCACCAAGG           CTTATTCTTAATCTT 100 190
CLC90_RS09415 2072081 .. 2072122 +   -11   -4.3014   CCGGTCGAGCCGCAA TAGTTAAAGGGATGCCAT TCATTC ATGGCATCCCTGTTGCTA  TTTTGCTCGCTATCT 100 41
CLC90_RS09425 2074687 .. 2074717 + -10.3  -3.28001   TGGTTGAGCAGAAAA       GGCCGCCGGCGTA ACAGC TGCACCGACGGCC       TTAAATTTGCCACTC  78 67
CLC90_RS09430 NONE
CLC90_RS09435 NONE
CLC90_RS09440 2075418 .. 2075432 +  -4.2   -3.6151   TACCGCCGCAGTTTG               CGCG ACATTTA CGCG               ATTTTTATCATTTCG  54 277
        pykF 2077203 .. 2077221 +  -8.8  -5.49568   CTGATAATATTAGAA             CGCCGC TATTACT GCGGCG             TTTTTCTTTTAACTT 100 61
CLC90_RS09450 2077742 .. 2077760 + -14.6  -5.75342   TACTTCAATGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCCCGA 100 44
        ydiK NONE
        rprA 2091156 .. 2091175 +  -7.8  -3.55622   AAGGATAATAAAAAA            TCCGCAAC CTGC GCTGCGGA             TTTCAGAACATTCCC  68 115
CLC90_RS09515 2094675 .. 2094688 +  -3.1  -2.64695   GCCGAATGTTTTAAA               GGTGT ATTC ACATC                ATTGATTGATACTCA  42 27
CLC90_RS09520 2095956 .. 2095986 + -16.3  -2.77899   TATCTGTTTTCTTTC      GCC-TTCAGGTGCC AAAC GGCACCTGAAGGGC       TCCTTGCTCACAGAG 100 106
        hemP 2096453 .. 2096468 +  -3.3  -4.07568   TTAACCAAATAATCC              GTATC CCTTCA GATAC               TTTTAGCAAGCCACC  56 29
CLC90_RS09530 2098668 .. 2098679 +  -5.8  -4.65895   GAGTTTAGCTGCAAC                TGGC TCAT GCCA                 TTTTTCCGTAGGAGA  75 79
CLC90_RS09535 NONE
CLC90_RS09540 NONE
CLC90_RS09545 NONE
CLC90_RS09550 2102401 .. 2102434 +  -8.9  -5.01732   CCCGTCGAATCCGAC     CCACGCGACATGA TCTTTACC TCATGCTGCGTGG      TTTTTTCCAGCGCTT 100 46
CLC90_RS09635 2119154 .. 2119169 +  -3.2  -3.01712   GGCTGACATCGCGCA              CAGCCA AAAA TGACTG               TGTTGGCCACAGACG  44 35
CLC90_RS09640 NONE
CLC90_RS09645 NONE
CLC90_RS09650 NONE
CLC90_RS09655 2121915 .. 2121955 +  -7.4  -2.53263   CGGGCAGCACGTCGC GCCGCTGCCGCGCGGTGGT CCAA ACTGCAACGCGGC-GCAGC  TGAATTCACCATGAC  58 487
CLC90_RS09665 2122915 .. 2122929 + -12.8  -5.60689   GCCACGTATATAGAA               CCCCGC AAT GCGGGG               TTTTTTCTTGTCTGG 100 64
CLC90_RS09710 2131620 .. 2131631 +  -2.2  -4.14392   ATTCTGTGAGTGGTG                CTTG AACG CAGG                 TTTTGGCAGTTAACC  55 367
CLC90_RS09715 2132083 .. 2132103 +  -6.9  -4.47284   TTAACTCAATTTGAC            CCAATGG CATTCCC CCATTGG            TTATTTATTTGTTTC  76 72
CLC90_RS09725 2133341 .. 2133368 + -13.4  -4.39568   TGGTTACTGGAACGC        CGCCTCGACTGT TTAT GCAGCCGAGGCG         TTTTCATCTATAAAT 100 195
CLC90_RS09735 2135424 .. 2135434 +  -5.4  -2.53911   CGATGAAATACTGCC                 TGCA AGA TGCA                 TCGGTTAGCGATTCA  49 138
CLC90_RS09745 NONE
CLC90_RS09750 NONE
CLC90_RS09755 2139258 .. 2139276 +  -6.6  -3.88029   GCATCCCACTGGCGA             TCGGAGCC TTT GTCTCCGG             TATTTTCTGTGCGGT  67 230
CLC90_RS09765 2141027 .. 2141053 +  -5.1   -4.0174   TGCCAAAATGAAAAA         GCCTGCCTC AAATCAACA GAGACAGGC         TTTATACGTTATGTT  63 55
        hxpB 2142868 .. 2142880 +  -3.3  -3.50853   CATCCGTTCATCACT                CCAGA TCA TCAGG                TTATCCTTGAACCCA  49 278
CLC90_RS09780 2143662 .. 2143676 +  -4.3  -3.54029   ACTAAATTGCCCAAA               TCATC ACCCA GATGA               TTATACTTCATACGA  52 45
CLC90_RS09785 2145687 .. 2145699 +  -4.8  -3.69068   CTGAATGGACTCAAC                CGAC GCCAG GTCG                TGTTTATTACGCTCG  57 479
CLC90_RS09800 2149318 .. 2149351 + -12.3  -4.27192   AGACACTCGAAAGCA     ATCTGAGGCCCCGCG TAAA TGCGGGGCCTCGGTG      TTTTCGTCAAAGTTT 100 251
CLC90_RS09830 NONE
CLC90_RS09835 2158122 .. 2158159 + -11.3   -2.9186   TTCCGCGTTTTTAAA   CCCTCTACCGGGTGGC AATCTGA GCCGCCCGGT-GAGGC   TCTCTACCATTGGCT  83 27
CLC90_RS09840 2160760 .. 2160776 +  -7.9  -4.85599   ACATACCGATTTAAT              GCGCCAG CCT CTGGCAC              TTTTTATCAGCTCGA  91 41
CLC90_RS09845 2161142 .. 2161152 +  -3.2  -4.48877   GTAACTTCGCGCTAA                 CCTA CGG TGGG                 TTTTCTCACTCTTTG  63 70
CLC90_RS09875 2166231 .. 2166266 + -13.4  -3.65522   ATTAAAAATACATGA    CCGATAAATACCGGTG TTTA CTCCGGTATTTATCGA     TTATTCACATGCCTA 100 517
CLC90_RS09885 2168560 .. 2168585 +  -7.7  -4.57569   CCTGGTTTAAGAAAA         CCAATCTGT AGTCAATG ACAGATTGG          TTTTTCGAAAACTGA  82 86
CLC90_RS09890 2169514 .. 2169525 +  -5.8  -2.63723   ATTAGCTTATCCCAA                CGGT TATC ACCG                 CTTACTTGCTGGCAG  52 147
        ampC 2171286 .. 2171303 + -10.5  -4.15565   TACAGTAAATAGCAT             GGCTCGC TTCA GCGGGCC              TTTTCAAATGCTGGG  91 33
CLC90_RS09900 2172016 .. 2172026 +    -4  -3.61268   AGGCCGAGTATAGGA                 TTTC GGG GAAA                 TTTCGGGATTGACTA  54 39
CLC90_RS10100 2218797 .. 2218839 +  -4.9  -2.73529   GCTTCGTATGAGCAT TCAAGCGCTTCGGCAG-CCT GGTA AGGACTGGAAAAGTGCTTGA TCACTTTCTCTGCAG  46 273
CLC90_RS10110 NONE
CLC90_RS10115 2220066 .. 2220079 +  -9.5  -5.52909   TACTTCTCCAACTAA               CCGGC TATG GCCGG                TTTTTTTACATCTTA 100 47
CLC90_RS10120 2220598 .. 2220621 + -13.2  -5.47218   CAAAATAAACCATCG          GAGCTACAGC TTAG GCTGTGGCTC           TTTTTTTACCTAAAA 100 60
CLC90_RS10125 NONE
CLC90_RS10130 NONE
CLC90_RS10135 2222006 .. 2222022 +  -5.8  -3.02024   CCTGAAATTCTTCTT              CGCCTG TGTTT TAGGCG              CTTTCATGTTTCTGG  54 264
         bet NONE
CLC90_RS10145 NONE
CLC90_RS10150 NONE
CLC90_RS10155 2226268 .. 2226286 +  -5.2  -3.01712   TTAGCCTTCGAGCAG             TCGCCGGA TTA TTCAGCGA             TGTTACAAAAACACG  52 180
CLC90_RS10160 2227112 .. 2227129 +  -3.3  -4.09923   TCATTAATTATATTC             CTGCCAG CAGG CTGGGGG              TTATTTCATTCAATT  58 123
CLC90_RS10170 2228366 .. 2228383 +  -6.9  -3.16564   CCCCTGTCCCAACTC             CTGCGGC TAAA GCCGAAG              TTAATACCGTAGCGA  59 229
CLC90_RS10200 2232834 .. 2232853 +  -4.4  -4.40561   GAACCTAAGGTAAAA            TAAAGCAGA AAT TC-GCTTTA            TTATTTTTCACGGCC  63 23
CLC90_RS10240 2241982 .. 2242005 +  -8.1  -3.39595   TGAAAGAAAATGGAA          GGCTTCGGC AAAGGC GCCGAAACC           TTCTGGATCGTTAGC  66 68
        pabB NONE
CLC90_RS10255 2244503 .. 2244513 +  -3.2  -4.57073   TCTACTCTATGCTCA                 CTGT GTC GCAG                 TTTTTAAAAAAACTG  63 116
CLC90_RS10260 2246259 .. 2246277 +   -16  -3.37464   AGATGAACGAAAGAA             CGGGAGCC ATT GGCTCCCG             TTCTCAGATTGATGA 100 70
CLC90_RS10270 2249631 .. 2249651 +  -3.2  -4.25658   ACAGAAAGGTTTATG            TCCGGTTC TGTTT GAACGGGG            TTATTTTACTCAGCT  61 61
CLC90_RS10275 NONE
CLC90_RS10280 2251387 .. 2251410 + -12.4   -5.0133   TCTGATGTCAGTATC          AAACCGGGGG TTCG CCCCCGGTTG           TTTTTTCCAGGAGTA 100 54
CLC90_RS10285 2252160 .. 2252171 +    -3  -3.03624   AATTCAGAAACGCCC                GTAT CAAC ATAC                 TCGTTTCATTCATCG  44 293
        mntP 2253162 .. 2253179 +  -4.9  -3.53224   CTGGCTGACGGAAGC             GAAGGATG ACT CA-CCTTC             TTTCCGAGCGCCGTA  55 318
CLC90_RS10330 2264215 .. 2264243 + -13.1   -4.1552   ACCCTGTTAATACTT        AGGCCATGGCCTG CCT CAGGCCATGGCGA        TTTATTACAGCACTG 100 31
CLC90_RS10340 2265661 .. 2265673 +  -4.9  -3.49938   AGAGTTCAAGCCATA                TATCA GTC TGATA                TTGTCGGTTATTTAG  55 107
CLC90_RS10345 2266381 .. 2266391 +  -2.4   -4.0942   CCAGTTCACCATCAC                 CACG TCA CGGG                 TTTCTCTGATAGCTC  55 325
        pgeF 2270016 .. 2270031 +  -7.5  -5.78622   ACACAGACGAAAAAA              CCCGC ACGTAG GCGGG               TTTTTTTTCAGCTAG 100 51
CLC90_RS10375 2272012 .. 2272027 +  -6.2  -3.02144   ATGCGATGGAGGTTC              TAACCA TTAT TGGTTA               TATTCGGGGGAGTCA  56 23
CLC90_RS10405 2275877 .. 2275898 +  -8.7  -4.68645   AGTCCGATTATAAAA           CCCGCAC CACGCACC GTGCGGG            TTTTAATTTTAACTC 100 39
CLC90_RS10415 NONE
CLC90_RS10425 NONE
CLC90_RS10430 2282456 .. 2282496 +  -6.3  -4.56314   CAGAATCCCGATTAA GTGTATGGGTAGAGCA TTTATCTCCC TGCTCTACCC-TACTC  TTTTGCTTCTCTTCA  74 26
        hdeB 2286635 .. 2286677 + -11.5  -2.62396   TGTAAGACGAAATAA GAAACTTCATGATGGCGAT ATATA ATGGCGATCATGGAGTTTC TAGTATCACGCCATC  80 36
CLC90_RS10465 NONE
CLC90_RS10470 2290380 .. 2290392 +  -6.9  -5.80951   CTCAAAATAAAAAAA                CCGCT CAA GGCGG                TTTTTTATTTTGACT 100 93
CLC90_RS10495 2292971 .. 2292987 +  -7.3  -2.55763   ACAACAGAACAGGAA              CGCTCTT ACC AAGAGTG              ATGGTTTTTCGCTGT  58 386
CLC90_RS10500 2293818 .. 2293829 +  -7.2  -2.61274   GATCCGGAAGGATAC                CCCG GAGC CGGG                 CTTCATTGCGGTCAA  56 477
CLC90_RS10545 2301939 .. 2301975 +  -3.2  -4.67608   ACCTGTTGCAGATAT   TTATGTATGAAAAGTCC TTCA GGGCTTTTCAT-TAAAA    TTTTATGTTCAACTG  65 44
CLC90_RS10550 2303827 .. 2303863 +  -4.5  -3.83155   CACACCTACCATCGC   CGGGCTGATAAACTCG ACCACA TGGG-TTATCAGCCGG    TTCTTAATATTAATA  59 161
CLC90_RS10560 NONE
        arcA 2308025 .. 2308047 + -13.5  -5.38839   CTAGGTTGAGCCAAA           GCCGGATAG CCTGT CTATCCGGC           TTTTCTTTTTGTCTA 100 61
CLC90_RS10580 2312729 .. 2312778 +  -3.6  -3.01261   TTTTATACATAATTG CCCTGAAATATCTGCGTTGCAGCC ATAT GGCTGTGGCGCGGATAA--CAGGC TATATATCACATTGT  46 57
CLC90_RS10585 2314435 .. 2314450 + -10.4  -3.10012   CTATTCTACTGACAA              GGGAGC CATC GCTCCC               TTGGCTCGTAACATT  77 45
CLC90_RS10590 NONE
CLC90_RS10595 2316340 .. 2316365 +   -12  -3.01924   TTAATTGTTATAGTT         CATCCCCTAT AACTCC ATAGGGGATG          TCTTGCACGGAAATA  86 42
CLC90_RS10625 NONE
CLC90_RS10630 2323623 .. 2323635 +  -9.1  -3.86015   GGCTGGTGATACAGC                GGCAC TGG GTGCC                TTTATCCGGGAGCTG  78 98
CLC90_RS10635 2325170 .. 2325192 +  -9.9  -2.71712   AATATTTAAACACCC          GCCGGTTCTG TCAC CAGA-CCGGC           ATTTAACCCACCGAG  71 63
CLC90_RS10640 NONE
CLC90_RS10645 2328006 .. 2328019 +  -3.1  -4.59109   CAATTTAGTTTTTAA               CACTT CATA AGGTG                TTTTTCCACCATGTA  65 177
CLC90_RS10655 2330849 .. 2330871 +  -4.1  -3.39803   TACGGTAAAAACTCG           CTCCCGT AGTGCGTGA ACGGGGG           TTATCCCTCTAACTG  51 309
CLC90_RS10660 2331370 .. 2331394 +  -3.6  -2.52529   CTGCGGGTTAAACAA         CCTG-CCCGTA CGCA TATGGGATAGG          ATGTTGCTAATTATA  44 2
CLC90_RS10665 2331606 .. 2331628 + -10.6  -3.12663   ATCCAGCCTCGTTTT           GCTGGGAC AGAAAAA GTCCCAGC           CTTTTACCTGATGAT  77 130
CLC90_RS10700 2336462 .. 2336485 + -11.8  -3.06037   GGCTAGGTATCTTCG          CAGGCCCGAGA GTG TCT-GGGCCTG          TCTATAATTTAGGGT  86 40
CLC90_RS10710 2338672 .. 2338682 +  -6.8  -2.74845   ATCGATTAATTATGC                 CGCA TGT TGCG                 ATTAATTGTTCTGGT  57 269
CLC90_RS10720 2340396 .. 2340426 +  -8.3  -5.77677   AGCCGTTAATAAAAA      GCGTGGCGTCAGGA TTAT TCCA-ACGTCACGC       TTTTTTATTATTTTA 100 46
CLC90_RS10745 2352326 .. 2352365 +  -7.9  -3.77413   CGTGAATACGTCCTT GTCGGCTCGTTCCGCGCTA TCCT TGGCGCGG-ACGC-TCGAC  TCTTTTGCTGGTCTT  72 146
        fliD NONE
        fliS NONE
        fliT 2364526 .. 2364537 +  -4.4  -4.14422   CGCCCTACTTGTCCT                GCTT CTGA AAGC                 TATTTTTGTGTGTCA  61 147
CLC90_RS10810 2365632 .. 2365643 +  -5.8  -3.50302   TCAGCAGTTTTCTTC                GCGA TTAA TCGC                 TGTATTTTATAATAA  59 110
CLC90_RS10815 2368660 .. 2368711 +  -6.1  -2.89028   CGCAGCCATCTTAAA CAAGCACAATAACCGAGGATAGAC GATAA GT-TATTCTCAGTTATTGTGCTGA TGATTAATTGGTTTT  55 48
        fliF NONE
        fliG NONE
        fliH NONE
        fliI 2377037 .. 2377061 +  -8.6  -4.53636   CTGCTTCCCGGCTAA         TCGGACGTCAG CATG CTGACG-CCGG          TTTTCATTCTGTAAT  87 26
        fliJ NONE
CLC90_RS10860 2378899 .. 2378910 +  -2.2  -4.57837   AATTGAACAAACGGG                CGAGC TAG GC-CG                TTTTTCCCCACCTAT  60 41
        fliL 2379526 .. 2379548 +  -3.4  -2.82623   TCAGCGACGTGCTGT           TTACCGCATT CAT ACTGCGATAA           TCATTATGGGCGACA  43 3
        fliM NONE
        fliN 2380953 .. 2380963 +  -2.4  -3.14132   TCTGAACGTATGCGT                 CGTC TGA GCCG                 TTAATGAGCGAAGCG  43 11
        fliO NONE
CLC90_RS10885 NONE
CLC90_RS10890 NONE
        fliR 2383777 .. 2383791 +  -3.4  -4.26079   TCACCGCATCTGATG               CTCCGG CCA TCGGCG               TTTTCAGTGATTTCA  60 514
        flgA 2394680 .. 2394695 +  -2.6  -3.47227   CGTGGGTGACGATGG              CGTAAT TCGC ATTATG               TTATAGTCGTTAAAG  48 4
        flgM NONE
CLC90_RS10965 NONE
CLC90_RS10985 2401693 .. 2401707 +  -2.8  -3.24976   ATTTAAAAATCGTCT               TGATGA CAT TCAGCA               TATATTTAAGCGATT  46 193
CLC90_RS10990 2402611 .. 2402630 + -12.2   -3.9392   TGAGTGCCTCTGGAA            CCATGCAG TGAT CTGCATGG             TTATTTAAAGTCGAG 100 89
CLC90_RS11000 2405311 .. 2405334 +    -6  -4.05902   AATCATTATTTTTCA          TGCATATGGG ATTT CTCACATGCA           TTTCGTTCTAATTTA  66 41
CLC90_RS11005 2408494 .. 2408520 +    -5   -2.7185   AGAAAGGGACATGAG         TGCAACGATGCC ACT GACAGCGATGCA         TGCTTCACCAGTAAT  48 27
CLC90_RS11010 2409406 .. 2409416 +    -4  -2.58579   CAGGATGCAGGTCGA                 TTGA GAT TCAA                 CTTATGACCCATTCC  45 103
CLC90_RS11015 NONE
CLC90_RS11020 NONE
CLC90_RS11025 2411375 .. 2411386 +  -7.2  -3.14132   GAATGCTATGAAGTT                CCCC AACG GGGG                 TTGGTGGAAAGAGAG  62 388
CLC90_RS11030 2412092 .. 2412117 +    -9  -3.57144   TGAAGTTGTTACACG         GAACCCGATG AGCGAC CACCGGGTTC          TTTGCCAATCCCCGA  73 94
CLC90_RS11040 NONE
CLC90_RS11045 2414585 .. 2414624 + -19.6  -4.25388   TTGAATGCTAAACAC  TG-GCTTTGCAGATGAGGG TAG CCCTCATCTGCAAAGTGCA  TTTACTTTTGGTCTA 100 261
        uspC 2428935 .. 2428965 +    -7  -2.77523   CCGTTATCTCCTCCG       TTAAAAATCGGG TGATTGC CCCGATCTTTAA       TAATATTGCTGAAAA  57 264
CLC90_RS11125 2432964 .. 2432993 + -12.1  -5.71712   GATAAAAGCAAAAAA       CCGGAGCAAGGTA ACCA TCCCCTGCTCCGG        TTTTTTTATATGCAG 100 239
CLC90_RS11140 2435478 .. 2435491 +  -3.8  -4.61916   CCAAAAAAAATAAAT               GCGA TCACTC TCGC                TTATTTATTTTTTGT  67 136
CLC90_RS11145 2438911 .. 2438928 +  -7.7  -6.14618   TATTGTATTTTTATA             CACCCAT TCTC GTGGGTG              TTTTTTTGTTTTATG 100 156
CLC90_RS11150 2440290 .. 2440300 +    -4  -2.78216   CATTCAACTATAACA                 GTTA ACC TAAC                 TAATTCATCAAACTG  46 181
CLC90_RS11155 2441043 .. 2441054 +  -2.2  -3.74397   TTATTGATGAGTAAT                CTCT TTTC AGGG                 CTTTTTTGTAACAAT  51 160
CLC90_RS11160 2442214 .. 2442231 +  -9.1  -4.99035   TGCAGCACCATCACA             GCTCCCA TTAC TGGGGGC              TTTTTATATCACTGC 100 100
        ydfZ 2442772 .. 2442788 +  -9.4  -3.17956   AGGTAAATACCTTAA              GGCCAC CTAGC GTGGCC              TTAATAGCGTGGTTT  72 79
        mtfA 2443903 .. 2443914 +  -3.6  -3.11289   AGATGCTGAGCAAAC                GCGC TTTT GTGC                 TGATTTTAGCGTTGA  48 127
CLC90_RS11180 NONE
CLC90_RS11185 2445501 .. 2445528 +  -3.4  -4.30014   AACTCTCAAGGTAAG        AGCAGATCCT GATAATAA GGGATCTGCA         TTTTAGCTTACTGAA  61 46
CLC90_RS11200 2447121 .. 2447135 + -12.8   -3.0701   ATCGTTTTCGAATTT               CGCCGC GTT GCGGCG               TTACCTCCCCCTTAT  95 287
CLC90_RS11210 2450531 .. 2450550 +  -3.6  -3.12327   TTCTGCACTGGAGGG            GTTTATGA CATC TCATCAAC             TATTACGTCTGAAAC  48 175
CLC90_RS11215 2450744 .. 2450761 +  -2.1  -2.85583   GAAGGAGATACAACA             TCA-TGAT CCC ATCACTGA             ATTTCACTGTGTTAA  41 43
CLC90_RS11220 NONE
CLC90_RS11225 2451545 .. 2451572 + -11.4  -5.60689   TAACAAGAAGACGCG        CGCGTAGA-AAGG TTA CCTTCTCTGCGCG        TTTTTTATTATCTGA 100 41
CLC90_RS11230 NONE
CLC90_RS11235 NONE
CLC90_RS11240 NONE
CLC90_RS11245 NONE
CLC90_RS11250 2457204 .. 2457231 +  -7.1  -3.66398   TCCATCATCTCCACA        TCGTGCC-GTAG CAACA CTACCGGTACGA        TATTTCTATATCCGT  68 52
CLC90_RS11255 NONE
       virB9 2458955 .. 2458967 +  -3.3   -2.8007   ATCATCCACCGTAAC                GCTGG AGG CCAGA                TGATTGATACATTAA  43 10
CLC90_RS11265 NONE
      virB11 2461225 .. 2461245 +  -6.2  -3.87925   ACAGTTAATCTGTTT            TAGCCAGT TCCAT ATTGGCTA            TTCTCTTTAGTAGTT  65 33
CLC90_RS11275 2462317 .. 2462330 +  -2.3  -3.11208   AGGGCGAATAGCTGA               CGAAG GAGG CATCG                TGATTTTAAATAAGC  43 39
CLC90_RS11280 NONE
CLC90_RS11285 2464973 .. 2465009 + -19.6  -5.46657   GGTCATCATGATGAC    TTACCCGGCTTGGCGG AATTG CCGTCAAGTCGGGTAA    TTTTTTATTCCACTG 100 51
CLC90_RS11335 2478063 .. 2478074 +  -5.8  -3.27298   AATCTCGCTTAGGAC                CCGT ATCC ACGG                 TTCGTGGTTAGGAGC  57 333
        dpiB NONE
CLC90_RS11385 2488554 .. 2488568 +  -4.3  -3.15861   TTCCATCAACAATTA               TTGCT CTATC AGCAA               TTGATCCGCATCATA  49 136
CLC90_RS11390 NONE
CLC90_RS11395 NONE
CLC90_RS11400 2492277 .. 2492288 +    -3  -3.60098   TAAATAAAACCGTAA                GTTA ATCA TAAC                 TTTACCCTACAACAT  51 97
CLC90_RS11405 NONE
CLC90_RS11410 NONE
CLC90_RS11415 2496682 .. 2496706 + -14.4  -3.32343   AATCTCTCCGCTGCC          GGCTGGTCAT CGCTA ATGACCAGCC          TTATCAAGCTATGAA 100 39
CLC90_RS11420 2497729 .. 2497739 +  -4.6   -2.7555   TTCCCAAACGCAGAC                 CGGG GTT CTCG                 TGGTATTCACCTATC  49 81
CLC90_RS11425 2498006 .. 2498029 + -11.8  -5.25893   GCCAAATTAGAAAAA          CCCGATTAAG GAAA CTTAGTCGGG           TTTTTTGCTATCTGT 100 37
CLC90_RS11445 2503324 .. 2503341 + -11.3   -4.7254   TCTCGCATAAAAAAA             CGGAGCT AATC AGCTCCG              TTTTTCATCACAAAT 100 48
CLC90_RS11495 2515242 .. 2515266 +   -10  -4.88407   AACCGACGTAATCTG          CCCTCTGCTG CCCAT CGGTAGAGGG          TTTTTCGTTCCCTCA 100 49
CLC90_RS11500 2516286 .. 2516303 + -11.3  -5.81412   CACGGGATAAAAAAA             CCGGAGT CTGC ACTCCGG              TTTTTTTTGGCTCAA 100 109
CLC90_RS11520 NONE
CLC90_RS11525 NONE
        torA 2524701 .. 2524719 + -11.8  -5.28176   TCACTGATAAATCAA             GGCGATAT CTA ATATCGCC             TTTTTTATGCCTGAA 100 54
CLC90_RS11540 2526555 .. 2526588 +  -8.8  -4.30995   TAAGTTCCTACACTT     CCTGCCATCGAGTC ATTTCC GTCTCGGTGGTGGG      TTCTTTTCTGGCAGA  86 38
        yeiP 2527343 .. 2527361 + -10.2  -3.12668   TGATTCAAACGTTAA             GAGCCGGT AAA ACCGGCCC             TTAACTGTCAACCTA  77 48
CLC90_RS11555 NONE
CLC90_RS11560 2530462 .. 2530491 + -12.9   -2.6078   TCATAGTATGCTTCA       CCACTGGTCTGAA CCCT TGCAGGCCAGTGG        TCACTTCCTCTTCGT  91 35
CLC90_RS11575 NONE
CLC90_RS11580 2533390 .. 2533405 +  -5.4  -4.21319   TAATCCAATAAAAAT              TGTGCG TTCC TGCACA               TTTATTCGGATTAGT  65 292
CLC90_RS11585 2534149 .. 2534166 +  -8.4  -5.80727   CGAAGAGATCAAAGA             CGCTGC CACATT GCAGCG              TTTTTTGTTGTTTTT 100 74
CLC90_RS11590 NONE
CLC90_RS11595 NONE
        yejB NONE
CLC90_RS11605 NONE
        yejF 2541895 .. 2541909 +  -2.8  -3.05844   CATTCAACAATGGCC               GAATCA ACC TGAATC               TCTTGCAGTGAAAGG  43 172
CLC90_RS11630 2546982 .. 2547009 +  -6.2  -2.88887   TAAACTGACTAACGA        ACCTGTTACTGG GTCG CCTGTAGCAGGG         TAAATTTTCTTTCGA  55 135
CLC90_RS11635 2547382 .. 2547407 + -11.9  -5.61913   TGATGCGATGAAAAA         TGCCAGCCAGT TCAT ACTGTCTGGCA          TTTTTTGTGTTTATT 100 87
CLC90_RS11645 NONE
CLC90_RS11650 NONE
CLC90_RS11655 2550993 .. 2551010 +    -7  -5.64274   ATAATCTCTTAAAAA             CCAACC CATTGC GGTTGG              TTTTTTTATGGGTGG 100 42
CLC90_RS11810 2573404 .. 2573423 +  -3.4  -4.77757   AAAACAAATAATTAA            GCCCCGAC ACCA GTCAGGAC             TTTTCGTTTTTGACG  68 49
CLC90_RS11880 2583495 .. 2583506 +  -7.2  -5.96219   CTAATCAATTAGAAC                CGGC CTTC GCCG                 TTTTTTTTATGCCTA 100 47
CLC90_RS11885 2584830 .. 2584847 +  -4.3  -3.65827   GCAAATTAAAAACTG             TTAATTA AACG TAATTAA              TTTAAATCCACATTC  54 18
CLC90_RS11890 2585754 .. 2585771 +  -6.3  -3.76379   TAGTACAACCTCAAA             TATCCCA GCGA TGGGGTA              TTTGGTGGAGTATTA  65 56
CLC90_RS11895 NONE
CLC90_RS11900 NONE
CLC90_RS11905 2587108 .. 2587126 + -10.2   -3.4072   AATAAAATTGTTCAT             GGCCCGTT TGC GGCGGGCC             TTCTAATAAACAGTG  80 36
CLC90_RS11910 2587349 .. 2587359 +    -4  -3.14931   AATCTCATCACTTGT                 TCAT CAA ATGA                 TTACTGAGGCGTAAA  49 1
CLC90_RS11915 2588751 .. 2588768 +    -7  -5.64274   ATAATCTCTTAAAAA             CCAACC CATTGC GGTTGG              TTTTTTTATGGGTGG 100 221
CLC90_RS11920 2589476 .. 2589492 +  -5.1  -2.76492   CCACAGGATGATCTC              GGGAGCA AAA TGTTTCC              ATTTGAAATCGCTAG  50 264
CLC90_RS11930 2590177 .. 2590205 +  -5.9  -2.74012   GCCAGCGCTAACTGT        TCCGGCGGTTCAT CTA ATGATTCGTCGGC        TAATTCAAATACTCC  51 226
        ampH 2592644 .. 2592662 +  -6.7  -4.82901   TCCTGGCGACCGAAA             GGACGTC TTGGC GATGTCC             TTTTTGTCAGCACCA  82 41
CLC90_RS11965 2597173 .. 2597186 +  -3.1   -2.8805   TAACGCGTTAATTAA               GGAAC CAGC GTTTC                TCTATGCAAAATAAT  43 30
        rcsD NONE
        rcsB 2600590 .. 2600617 + -12.1  -4.21812   AGCTGTACCATTCAA        TAAACCCGGCG AATCAC TGCCGGGTTTA         TTATTTTCAGTGCCA 100 50
        ubiG 2607492 .. 2607502 +  -2.6  -4.36914   TCAAATTTTTAAGAT                 TTTT AGT AAAA                 TTTTATCCCCCAGAC  59 228
CLC90_RS11995 2610089 .. 2610123 + -11.5  -3.37533   AGTTAAGGCCCTCTC    CCGCCGGGCAATC-CA TGCA TGCGATTGACTGGCGG     TTGATCATTTTGCAC  86 46
CLC90_RS12000 NONE
CLC90_RS12005 NONE
CLC90_RS12015 2613379 .. 2613400 +  -4.4  -2.87931   CTCGACGACATCATC           TCTGCTGG GGAAGA CTGGCAGA            TGTGTCAAGCGTCCA  46 72
CLC90_RS12025 NONE
CLC90_RS12030 NONE
CLC90_RS12035 2618188 .. 2618224 + -11.7  -3.46212   GCCCCTTTGATAACG   TCCTCAATCGCGCCAC CCCTGA GTGGCGCGAT-GAGCA    TTCCTTCTACCTGCT  89 126
        tyrP 2619688 .. 2619711 +  -6.7  -2.69471   GGGCCAGTTTATGCT          GCGCACC CATTTTATCA GGTGCGC           CTTATATCCCCGTCC  56 86
CLC90_RS12050 2622118 .. 2622138 + -11.1  -2.68071   TATTTTAGTCATCAG            CTCGGTTGC TAA GCATCCGAG            TCGGTTTCGGTTGAG  76 44
CLC90_RS12165 2650030 .. 2650047 + -10.5  -2.70932   CAATACTTGATTGTT             GGGGGGC GCAA GCCTCCC              TAATTCGCCGAGAGC  74 52
CLC90_RS12170 2651100 .. 2651110 +  -2.4  -3.04144   GGGCGCCATCAATAC                 CGCC GTT GCCG                 TATTGGAAATAAACA  42 391
CLC90_RS12180 2653900 .. 2653918 + -11.7  -3.55548   TTTTCGCTTGATATT             CCCTCGC ACTGG GCGAGGG             TTTACCGCGCTGTTG  89 116
CLC90_RS12195 2656666 .. 2656695 + -15.1  -4.07568   CTGCATAAGTCTCCT       CAATACCGTCAGC TAAA GCTGGCGGTGTTG        TTTTCACCCGACAGC 100 33
CLC90_RS12200 2658928 .. 2658947 + -10.7  -5.39721   GGTTTGTTGTAAAAA            CGCCAGC TTTCGC GCTGGCG             TTTTTTATCTGGTCG 100 51
CLC90_RS12210 NONE
CLC90_RS12215 NONE
CLC90_RS12220 2662383 .. 2662404 +  -7.2  -5.05228   ACCATCAATAAAAAA           GGCGCCGA GAATTA TCGGGGCC            TTTTTATCATTTACT  89 58
CLC90_RS12240 NONE
CLC90_RS12245 2666761 .. 2666778 +    -7  -4.64766   CAGCTAACGGATCTA             TACCCC ATTCTC GGGGTA              TTTTTCCCCTCTCAA  79 34
CLC90_RS12250 2668051 .. 2668079 + -11.1  -2.92667   ACCGATTTACTTTAA        TGCGCCTGAAA GGAACTG TTTCAGGCGCG        TGCTTTGCGGATTAC  79 49
CLC90_RS12330 2683637 .. 2683657 +  -6.7  -4.57569   AGTGGTCACACTCTC            GGGCTGGGG AAG CCGCGGCTC            TTTTTGCCGGAGTAA  77 73
CLC90_RS12340 2686656 .. 2686685 +  -9.9  -2.64155   TGACATTTTCCCCGT       CCGCGACCAGCGT GTTG ACGCTGGGCGTAG        TGAATTTGCACACCC  66 362
CLC90_RS12365 2691480 .. 2691490 +  -6.8  -2.75294   AACCGTCCGGTTCCA                 GGCT TTC AGCC                 GTTTACCCACTTTGC  54 211
        mnmC 2696512 .. 2696528 + -11.5  -3.21772   ATAAGGGAAGTGCTC              CGCCGCC AGC GGTGGCG              TATTGTAAAACGATT  79 425
        smrB 2701660 .. 2701692 + -15.8   -3.2327   ATTAACCGAATAAAT     TAAGGGCGTG-ACAG AAAA CTGTTCACGCCCTTA      TTGGTGATGCCTTGC 100 28
CLC90_RS12425 2702674 .. 2702688 +  -2.8  -3.86312   ACAGCAGGCATGTTA               CAGG ATTTTCG CCTG               TTCTTACTTATAGCT  52 177
        fadL 2708547 .. 2708574 + -15.8  -4.14392   ACGAACGCCAACCAA        TAAAAAAGCGCC TTCC GGCGCTTTTTTA         TTTTCAACATTCCCG 100 110
CLC90_RS12490 2715351 .. 2715362 +  -5.8  -3.14931   CCAAATAACCGTCAA                TGGG CATT CCCA                 TTGATGCGGCATCAA  55 138
CLC90_RS12505 NONE
CLC90_RS12510 2719064 .. 2719082 +  -8.9  -3.17184   CTCAAGTTCTTGGTC             GCCTAGT TTAAT ACTAGGC             CTTTTAAGTTCAATT  67 404
CLC90_RS12540 2725484 .. 2725505 + -11.6  -4.43576   GATAGTAGAGAACCA           TACCCGGC CCAGCA GCCGGGTA            TTTCTTATCTGTAAT 100 156
CLC90_RS12580 2732728 .. 2732741 +  -3.1  -2.84125   ATAATTTATAACACC               GTGAT TCCT GTCAC                ATTTCAATCTATCGA  43 89
        ypdK 2733121 .. 2733136 + -11.8  -4.27846   TATTCCAGCATTAGA              GGGCGC AAAT GCGCCC               TTTGTCATTTTATTT 100 53
CLC90_RS12600 NONE
CLC90_RS12605 2738564 .. 2738578 +  -3.5  -3.35679   TAATTTAACTTCCCC               CGTTC AACCG GAGCG               TTATCCATGAAAGCC  49 38
CLC90_RS12610 NONE
CLC90_RS12615 2740790 .. 2740811 +    -8  -5.52023   CTGTGACATAAAAAA           CCACGTCG TTAATC TGACGTGG            TTTTTTATTGCTCAT 100 55
CLC90_RS12630 NONE
CLC90_RS12635 2743933 .. 2743968 + -10.4  -2.64354   TCACGACGATTAAAA    CTGG-CTCCGGCGGTGA GCT TCGCCGCCGGGCATCAG    ATTCTCGCTATATCA  74 28
CLC90_RS12645 2746844 .. 2746857 +  -9.5  -5.36441   TGACTGTTGAAAAAA               GGCGC TGCG GCGCC                TTTTTTATCTCAACG 100 52
CLC90_RS12690 2750034 .. 2750050 +  -9.4  -5.19212   TAGCTTAATATCCGA              GCGGCT CCTGT AGCCGC              TTTTTTCATACTACT 100 51
CLC90_RS12700 2750308 .. 2750327 +  -7.2  -2.60723   CTCCACCAAACTTCG            CTTGATTG AATG CAGTCAAG             GTTGATTGGCGGTAC  58 33
CLC90_RS12705 2750467 .. 2750495 + -15.5  -2.83403   AGCTCCACCAACTTT        TAAAAAACCAGCC GAT GGCTGGTTTTTTG        CTTTCCTGCCCACGC 100 31
CLC90_RS12710 NONE
CLC90_RS12715 2751901 .. 2751918 + -12.7  -2.88536   CAGATCAGATGCACG             CCACCGC CGAA GCGGTGG              ATTTAGATTGATTCT  89 341
        cysZ 2755976 .. 2755994 + -13.1  -3.79906   ACGCTAGTCCAGCCA             GGGCGCG GCTTA CGCGCCC             TTCTTGTCAAGATGA 100 34
        cysK 2757118 .. 2757133 +  -6.1  -5.69473   CTAAATGCTAAAAAA              GCACC CTCTGT GGTGC               TTTTTTTGTGGTGTG 100 54
CLC90_RS12745 NONE
        ptsI NONE
CLC90_RS12755 2760105 .. 2760120 + -10.4  -5.80003   TGCGGATAAGAAAAA              CGACGC TTCG GCGTCG               TTTTTTATTTATTAG 100 47
CLC90_RS12805 NONE
CLC90_RS12810 2771653 .. 2771685 + -10.6   -5.1101   ACGCTGAAAATAATA     AAGGCCGGGTATGCT GAAT AGCG-ACCCGGCCTG      TTTTTTGCATAATAA 100 60
CLC90_RS12825 2774243 .. 2774275 +   -12  -2.98942   ACCATAATTCCTAAC      GCCCTATCTCTGCG TTCAT CACGGGGATAGGGC      TATGTCTGCCAGCCT  86 34
CLC90_RS12855 2777566 .. 2777588 +  -6.3  -5.68438   GATTATTCAGCAAAT           CCAGCGT AGCAATCAG ACGCTGG           TTTTTTATTTCGTAA 100 52
CLC90_RS12875 NONE
CLC90_RS12880 2781039 .. 2781069 + -11.8  -3.13403   TAACGCGCCCCCTCG       TTGCCCGATGCTGC CGA GCAGCGCAGGGCAA       TATTGATCAAAAAAG  86 38
CLC90_RS12920 2790586 .. 2790625 +  -5.2  -3.56036   AAAATCAGTCTATCT  GATGGTGAAAAAGAGCGAC CTT GT-GTTTTTTTACACTATC  TCCTTTTTTTCTCCA  57 367
        acrD 2793904 .. 2793941 +   -10  -4.57353   TATTTGAATACAAAA  C-ACGCCGTTAAACC-GC TCTG GCAGGTTTAACGGCGGCG   TTTTATATCGTGAAA 100 46
CLC90_RS12935 2795051 .. 2795063 +  -4.1   -3.1541   ATTTAGATCGTATTG                GCTAA TGG TTGGC                TGGTTTATTATCAAT  49 21
CLC90_RS12945 NONE
        dapE NONE
CLC90_RS12955 NONE
CLC90_RS12960 2798480 .. 2798494 +  -2.7  -3.93262   GCCTAACGCAGCCAA               ACGGC TCGCT GCCGC               TTTACTGTGTTCGAC  54 299
CLC90_RS12995 NONE
CLC90_RS13000 2806159 .. 2806174 + -10.4  -5.64274   TTTAATCAGCAAAAA              GAGCGC CAAA GCGCTC               TTTTTTTATGGGTGG 100 64
CLC90_RS13010 NONE
        arsC 2809733 .. 2809747 +  -7.2  -4.77036   TAGCTTGGCGCGCAA               TTGCAA AGC TTGCAA               TTTTTCGTCGTCAGA  83 256
CLC90_RS13035 2813772 .. 2813785 +  -5.3  -2.73681   ACGAATCCCGATGAG               CTTAC TCAG GTAAG                TGATTCGGGTGAGTC  50 86
CLC90_RS13040 2814619 .. 2814645 +  -8.8  -3.50047   AAACGTGTTCCTAAA        CAGGCCAGTAC AGGTAC GT-CTGGCCTG         TTATCGATTTCTGCG  73 39
        speG 2815360 .. 2815378 +   -16  -3.83026   CGCTTAATTATTGCG             CCGGAGCC ATC GGCTCCGG             TTTCATCTGACCGCG 100 34
        ppk1 NONE
         ppx 2824082 .. 2824121 +  -8.6  -3.59031   CTAATACCGTCGCCA  TCGGCGTTCAGGGTCA CATCCCCA TCAGCCTGAACGCCGG   TTAGTTATATTTAAT  73 37
CLC90_RS13075 2824427 .. 2824445 +  -5.3  -3.37354   TCCGGTGAATGTCAG             TGCGCAT GACTA ATGTGCA             TTATGAATCACTATG  55 104
        mgtE 2826372 .. 2826382 +  -5.4  -3.05993   CCGCGCGAAAAACCG                 CAGA CTC TCTG                 TATATCTGTCGGTAA  52 330
CLC90_RS13085 2828040 .. 2828053 +  -2.5  -3.83006   ATTTCCCTTTAAAAA               TAAAA TCTC TTTTA                TTATTAGTTAGATAT  52 240
CLC90_RS13090 2829092 .. 2829130 +  -5.4  -4.72473   TGTATATTTATGGTG   TATTCATCACCCCGAT TTTATTT ATCGGGGTTGTCAATA   TTATTTTTTCATTGC  73 96
CLC90_RS13095 NONE
CLC90_RS13100 2832422 .. 2832451 +  -5.1  -2.81208   TCGGTAAATACCATT       CTGGGAGATAA CAGATTAT TTATCTCCCAC        CTATTTTCAATAAAA  50 34
CLC90_RS13105 NONE
CLC90_RS13110 2835227 .. 2835239 +  -2.6  -3.76373   TACAGTCAGTTTGTC                GCCG CTAGC TGGC                TTTCCGTATTCCCAG  52 476
        mdtA NONE
        mdtB NONE
        mdtC NONE
CLC90_RS13130 NONE
        baeS NONE
        baeR NONE
CLC90_RS13145 2846902 .. 2846919 +  -7.7  -3.42354   AATCATCGGCTTTTG             CCAC-CCC TTT GGGCGTGG             TTCTGACTTGAACTC  68 168
CLC90_RS13150 2848469 .. 2848496 +  -5.5  -5.42198   AGGAACCACCTCCTT        CGCTGGCCCAA TCTCCC TTGGGCTGGCA         TTTTCTTTTTTAACC  87 179
        yegS 2849937 .. 2849947 +  -5.4  -4.12226   AAAGCTTCTGCTATT                 TCCA GTC TGGA                 TCTTTTTCTAGTTGT  65 246
CLC90_RS13165 2851716 .. 2851727 +  -4.4  -2.72344   CTGGGGGTAAATAAC                CAGT CGGG ACTG                 TCATTACCGGTCAGA  44 289
CLC90_RS13195 2860790 .. 2860831 +  -2.1  -4.88895   TTCAACCATCCGCCA GAAA-TGCGAAGGGCGCGGA ATA TCCGCGCCCCTCTAACTGAC TTTCTTTATTTCTTT  66 498
CLC90_RS13320 2891545 .. 2891570 +    -9  -5.28176   CCTCAAAAATTGCGA         TGCCAGTCCG TTAATT CTGACTGGCA          TTTTTTATGGCTGAG 100 56
        csiE NONE
CLC90_RS13350 2898865 .. 2898888 + -10.3  -2.98783   ACATCACCTACACCA          CTGGTCAGC CTCCTC GCTGGCCAG           ATTTCATTACCTTTT  76 52
CLC90_RS13355 NONE
CLC90_RS13360 2900467 .. 2900488 +  -2.3  -4.72386   AATATAATGACGCTG           AATGCGTCTG GAA CAGAC-CATG           TTTTTACATGCTTTA  63 118
CLC90_RS13365 NONE
CLC90_RS13370 NONE
CLC90_RS13375 NONE
CLC90_RS13380 2904418 .. 2904444 +  -7.3  -4.72272   TCAGGATAAGAAAAA        GCCCGTTTCATC TTTT GACGAA-CGGGC         TTTTTAGTCGGCAAC  81 63
CLC90_RS13410 2911969 .. 2911984 + -11.8  -2.94912   GATAATCCAAAATAA              GGGGGC ATCA GCCCCC               TCTATCGGTTAACCC  86 58
        mltF 2918086 .. 2918103 +  -6.3   -3.4252   CACCTCGCCCTCTTC             CTGCGCAC GCT GTGC-CAG             TTCTAATGCCTGACG  59 490
CLC90_RS13445 NONE
CLC90_RS13450 2923185 .. 2923198 +  -3.1  -3.41602   GGTTGCTGATGTTTC               TGGTA CTGC TGCCA                TTCTGATGGGCTGAG  47 357
CLC90_RS13510 2934794 .. 2934806 +  -7.7  -3.93695   TTGCGCAACGGCAAA                TGCTG ATG CAGCA                TTTCTCCGTCCTGAC  70 155
        srmB 2936940 .. 2936964 +    -5  -5.67063   GCACTCATGCAAAAA         GCCGCT-GAAT TCAC ACTCAAGCGGC          TTTTTTTATGGTGAA  91 58
CLC90_RS13540 2940771 .. 2940782 +  -4.4  -4.57073   TGATTCCGCAACCAC                TTCG ATAC CGAA                 TTTTTCCACAGCATC  68 253
CLC90_RS13550 2942212 .. 2942223 +  -4.4  -3.05844   TACTGTATATAAAAC                CAGT TTAT ACTG                 TATTCAAATACAGCC  47 59
        recN NONE
        bamE 2944506 .. 2944526 +  -7.5  -5.59502   GACGGTTGATAAAAA            TATGGCGCG TAA TGCGCCTTA            TTTTTTGGTTTTTTC 100 149
        smpB 2945875 .. 2945891 +  -5.9  -2.64061   GAAACATGCTAATCG              TTAAGTC ACT GGCTTAA              TAGGTTATAGTTCTG  52 22
        ssrA 2946354 .. 2946379 + -16.1  -5.31456   GATGAAGTCCTAAAA         GCCCGCATGGC GCAA GCCCTGCGGGC          TTTTTTGTACCTTCA 100 72
CLC90_RS13585 2947802 .. 2947814 +  -4.7  -3.55444   GTGCATTTGCTCAAA                CCAGC TCT GCAGG                TTTCGACGGTAGAGC  55 76
CLC90_RS13590 2948846 .. 2948859 +  -2.3   -3.2614   GTGATCAGGCTCCAA               GACGC AACG GAGTC                TTCATGTGGCACATA  45 37
CLC90_RS13620 2957920 .. 2957933 +  -3.1  -3.45817   TGTCGGTCGCCCGCG               CC-GTC TGG GACTGG               ATTTTCTTCTGACGA  49 0
CLC90_RS13625 NONE
CLC90_RS13630 2959400 .. 2959414 +  -5.6  -3.21747   TCTGGCTGAACTATG               TCGCCG CAC CGGCAA               TTGCTGATGCAATGG  55 4
CLC90_RS13635 2960372 .. 2960397 + -14.7   -5.0925   TGTCCGTTTAATTCA         GCCCCTGTCGC TCAT GCAACAGGGGC          TTTTTCGTTTTGAAG 100 485
CLC90_RS13650 NONE
CLC90_RS13655 NONE
        radC NONE
CLC90_RS13665 NONE
CLC90_RS13670 2963212 .. 2963226 +  -5.7  -3.67775   TGACCAGACTGAGCC               GCAGT AACTC ACTGC               TTATTCCCTGAACAT  61 19
CLC90_RS13675 2963834 .. 2963860 + -11.5   -5.4492   GGAGAAGTACGGAAA         GCCCGCACGCC ACCTA GGTTTGCGGGC         TTTTTTGTGTCTATA 100 273
CLC90_RS13685 2965760 .. 2965792 + -11.5  -3.41878   GGAATAGAGATGAAA      TTGCATTACAGTGCA ACT TGCATTATAATGCAA      TTCTAACTTGAGGAC  89 74
CLC90_RS13690 NONE
CLC90_RS13695 2966469 .. 2966491 + -13.4  -5.01845   TCCGGTCATTCGTCA           GGACTGCGCC TCC GGCGCGGTTC           TTTTTACTTCTTCTC 100 83
CLC90_RS13710 NONE
CLC90_RS13715 NONE
CLC90_RS13720 2972609 .. 2972635 +  -2.2   -3.8165   AATATCCCTCTAATG         CAGTTTCAGGGA AAT TGCCTGTGATTG         TGTTGTTTTATTCAA  51 2
CLC90_RS13725 2973279 .. 2973298 +  -2.9  -3.66356   CATATTCCAGCATCT            CTGTCGCT ATTGG AGCGA-AG            TTTCACATTGACGCT  50 62
CLC90_RS13730 2974281 .. 2974291 +  -2.6  -4.72272   AAGATTAATGCAACA                 TTAA CGA TTAA                 TTTTTCCTGAGAGAA  64 5
CLC90_RS13760 2977737 .. 2977758 +  -2.9  -3.05384   AAAAACTCTAAAGCT           GTGGCCAGT TTTT GTTGACCAC            TTCAATAGCGCCAGA  43 8
CLC90_RS13765 2978561 .. 2978605 +  -8.2    -3.492   ATATAAAATCTCGTT TTTGA-CATGACAGTACTAAT TTTT ATTGGCACTGTCATGATTAAA TATTTAAATTGATTT  71 68
CLC90_RS13770 NONE
CLC90_RS13775 2988432 .. 2988442 +  -4.6  -3.94409   GTGTCCCCCTCCGAC                 GTGG CCG CCGC                 TTTCTGGGTGCTGTA  61 475
CLC90_RS13785 2995517 .. 2995533 +  -5.8  -3.55563   GCTGATTGGGACGCT              CTGCCA CGAAC TGGCGG              TTTACCAGGTCCGCT  59 308
CLC90_RS13840 3005221 .. 3005242 +  -4.4   -4.2349   TTAGTGATGAGCAAA           GCGGTTGG TTTTAT TTAACCGC            TTTTCCCTCTGGAAC  61 51
CLC90_RS13845 3007285 .. 3007298 +  -3.7  -2.81725   TTGAATATGGTCTAT               GGCTG ATTT CTGCC                TAATTAATGTGACCT  45 100
CLC90_RS13850 NONE
CLC90_RS13855 3010370 .. 3010391 + -14.5  -2.78725   GCAGCACATATAAAA           GCCGGAGAA ACAT TTCTCCGGC            TCGTTACTCAGATAT 100 83
CLC90_RS13870 NONE
CLC90_RS13875 3014533 .. 3014544 +  -5.8  -2.64735   CTGGAACTGAAACCG                TGGC AAAT GCCA                 TAGTGTCCCTCGACT  51 145
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 3019851 .. 3019877 + -10.9  -2.98381   CGCTAAAACGATCGA         GGGTCTTTCAG ACTGG CAGAAAGACCC         TGCTTTGCTCACTTC  79 49
        proV NONE
        proW 3022807 .. 3022821 +  -7.8  -3.26471   ATAACCATCGCCCTG               CGGGTT GAT AGCCCG               TTGCTCTCAAGCTGC  66 40
        proX 3024053 .. 3024064 +  -4.4  -2.78384   ACGAAAACAAACCTC                GATC CTGC GATC                 TCTGATGGGGAAAAC  46 56
CLC90_RS13930 3026194 .. 3026207 +  -5.3  -2.97925   CCATTTACATTATTA               GTAAC TATC GTTAC                TGTATCGTCTGAAAT  52 401
        mprA NONE
CLC90_RS13940 NONE
        emrA NONE
        emrB 3029881 .. 3029907 + -13.8  -4.52589   TCGGATAAAATAAAA         GGGACGCTGA CATATCA TCAGCGTCCC         TTTTATATCGAACAA 100 52
        trxC 3031778 .. 3031808 + -11.2  -4.40601   CGCGGCTAACACCGC       CGCTCTTACCGA GTATTTA TCGGTAGGGGCG       TTTATTCTGTCACTT 100 79
CLC90_RS13965 3032619 .. 3032629 +  -3.2  -2.73994   CAGAAAACGGCTAAA                 GTCT GTC AGGC                 TACTCTTAGCAGGGT  43 27
CLC90_RS13970 NONE
CLC90_RS13975 3036973 .. 3037003 + -16.3  -5.10154   ATCAAGCGGTACAAG       GCCTGAGTTCTGT ATTCC ACGGAACTCAGGC       TTTTTAGTTTTAACT 100 91
CLC90_RS13980 3037899 .. 3037920 + -12.9  -3.81089   CTGAAAACGCCAAAA           GCCCCCGGC GCAA GCAGGGGGC            TTCTTCATCTCTGTC 100 160
        metN NONE
        metI 3046167 .. 3046184 +  -2.6  -3.06671   TAATCAGCCTGCGAT             AGCGCT CACAAC AGCGCA              TATTAAAATGAATGT  43 41
CLC90_RS14020 3047064 .. 3047087 + -16.8  -4.07877   TAGTCACTATATCTG          CAAGACGGGC TTCG GCCCGTCTTG           TTATTTGTGAGATAG 100 58
        rcsF NONE
        tsaA 3048352 .. 3048364 +  -4.1  -3.40403   CTACACGGCAGCCTG                TTGCA ATT TGCAG                TTCTAATGGAACCAA  51 116
        proS 3050130 .. 3050146 + -10.9  -5.11063   TCAGCGACAAAAAAA              GCCCTAT TAA ATAGGGC              TTTTTATTGCATCGT 100 51
CLC90_RS14055 NONE
CLC90_RS14060 3052754 .. 3052769 +  -3.2  -4.41241   ACTTCGGCCTGACCA              CCGG AACGCCCA CCGG               TTTTATAAGCCTTTA  63 185
CLC90_RS14085 3056241 .. 3056254 +  -3.9  -2.94924   TAAATAAAATATAAA               TTCAT CATA ATGAA                CTTTATACATGGAGG  46 34
CLC90_RS14090 3056649 .. 3056673 + -14.3  -4.65895   TTTGCCAATAAAAAA          CCCGGAGCCAA ATT TTGACTCCGGG          TTTTTAACTGAAAGA 100 55
         map 3077683 .. 3077698 + -11.8  -5.26316   GAGTAATCACGACCA              GCCGGC GATC GCCGGC               TTTTTTATGGGCTGC 100 35
        glnD NONE
        dapD 3081309 .. 3081329 +  -6.1  -5.84432   TGACTAACATTCAAT            TGGCGGG CTAATTA CCCGCTA            TTTTTTTGTCTTGTA 100 34
CLC90_RS14195 3081855 .. 3081880 +  -8.4  -5.80951   TATCGGATCAAAAAA         GTGGCG-ACAA GAATA TTGTTCGCCAC         TTTTTTATTTTCACT 100 57
        queF NONE
CLC90_RS14225 NONE
CLC90_RS14230 3088560 .. 3088576 +    -5  -3.75378   TGTCATTAACCTCAA              GGGAGC CGAAA GCCCCC              TTATATTATGCAAAT  59 202
        csdA NONE
        csdE 3093977 .. 3093993 +  -5.1  -2.52946   TGTCCGCCAGCACCA              CCGGT AGCAATC ACCGG              AATTTTATAGCGACG  48 388
CLC90_RS14275 NONE
CLC90_RS14280 NONE
CLC90_RS14285 3096316 .. 3096329 +  -8.1  -6.02919   CTTTCTTACTCAAGA               CACCC ATAT GGGTG                TTTTTTTGTTTCTGG 100 55
CLC90_RS14295 3099457 .. 3099470 +  -8.1  -4.98255   GGTCAGTGACCTGAA               GGAGC CTCT GCTCC                TTTTTCTGATTAGCA  95 234
        mutH 3119829 .. 3119840 +  -2.2  -2.64888   TGTGTTTCTTTAAGG                TGTG TAGG CGCA                 ATGTTTGAATGGATT  40 196
CLC90_RS14370 3120569 .. 3120600 +  -2.8  -3.11701   GATATAAGCAAAAAT      ACCTACGGGTGCGA CCTC TCGCACCCGTCTCA       CTCTTTTTTACTCAC  44 34
CLC90_RS14375 3121786 .. 3121806 +  -9.7  -4.41047   TCTCCAACGCCAAAA            GGCCGTTGA TAT TAAACGGCC            TTTTGGTTAAAAAAT  93 55
        galR 3127347 .. 3127358 +  -5.8  -3.05384   CAATCAGCGGCTCAT                GGGA AAGA TCCC                 TTCCATCCGCAGGCA  53 457
CLC90_RS14400 3129790 .. 3129802 +  -3.4  -3.19668   CGCGCCATTGCTCAT                TGGT GGCAA ACCA                TTCGATTAAATAATC  46 385
CLC90_RS14410 NONE
CLC90_RS14415 3132370 .. 3132400 +  -6.2   -3.6422   GATCGTTACAAAGAG       GGCTAATGACCT TAATTGT GGGTGATTAGCC       TCTTTTCAGAGAGTC  63 39
        fldB 3157689 .. 3157707 +  -5.8  -3.31792   GCCAAATACGTTTTC             GGCGGCGG CTG CCAGCGCC             TTGTAACGATAATAA  57 277
        ygfZ 3159553 .. 3159593 + -11.4  -2.91144   TAAGCTATCAGGTCA TCATGATATTTAGAGGCCG GTTC TGGCCTCTAAATATCC-GA  TAATTTGCCGAGTCG  83 38
        zapA NONE
        ssrS 3171339 .. 3171351 +  -4.8  -3.75153   CCGATTTGTAAAATA                GGCA GTTTA TGCC                TTTCAATTCCCAGCA  59 83
CLC90_RS14615 3172143 .. 3172157 +  -2.8  -3.61106   GCACTGGTTTGCAGA               TACTGC GCG GCAATA               TTGATGTTTTGTTCG  49 225
CLC90_RS14630 3175398 .. 3175421 +  -8.9  -2.91997   TCAAAGTGGATAGTT          TGCTGCTCA TAAGTT TGGGCAGCA           TCGTTCTGTCTCCCG  65 94
        metK 3189197 .. 3189208 +  -4.4  -2.97403   CAGGGGCGAGGTTTG                TCAG CAGT CTGA                 AATTTTTTTATGCCT  47 210
CLC90_RS14700 3191102 .. 3191115 +  -2.4  -3.38738   AAAAACTGCAATTTA               TGGT GACACA ACCA                TCTTAGTTATTTGAT  45 6
CLC90_RS14705 3191980 .. 3192013 +  -2.3  -2.93853   CCTGCGGTTATCCTT     TTATTTCGCGTCGTT AACC GGCGACGCGCTAAAA      CTTTCGTTACGGAAG  42 78
CLC90_RS14710 NONE
CLC90_RS14715 3193751 .. 3193788 +  -8.5  -2.85503   AAAGTCTGATTAAAA   TCACCGGTTATGGCA TTTTTACC TGCTGCAACCGGTGA    CTTTCGCTATTCCCA  64 32
CLC90_RS14720 NONE
        ruvX 3194921 .. 3194932 +    -3  -4.58724   TTTTCTAATTTTTCA                TCAA TATA TTGA                 TTTTAATTATATTTA  65 99
        aguB NONE
        aguA 3197264 .. 3197294 + -11.1  -3.14564   CCACGCATTCTGTAG       CACCAGCCCGGAT CTTGA ATCCGGGCTGAGG       TTAATGACAAAGTGC  79 51
CLC90_RS14745 NONE
CLC90_RS14750 3200127 .. 3200154 +  -3.4  -3.67188   AAAACAACACGTTAA        CCCCGAATCTTTA TTC TTGGGAT-CGGGG        TATTTTAAACTGACT  51 59
CLC90_RS14755 3200730 .. 3200743 +  -4.5  -2.64735   AATGGATCTGTTAGG               CGAGC TCTG GTTCG                TACTGTGAGTGCAGT  48 4
CLC90_RS14760 NONE
CLC90_RS14765 NONE
        hemW 3203039 .. 3203053 +  -5.6   -5.5074   GTCAGCGGTCTGAAA               CGGGTG TAA TGCCCG               TTTTTTATTCGATTG  90 209
CLC90_RS14795 NONE
CLC90_RS14800 3207538 .. 3207553 +  -6.8  -2.87003   ATCAGTGACACCCAA              GGGTCA GCAA TGGCCC               TCATGTTATTCCTCA  57 33
        mltC 3208691 .. 3208716 + -12.7  -5.75342   TGGCAATATAAAAAA         TGGCAC-AGCTC ATC GAGCTTGTGCCA         TTTTTTTTGCACCGC 100 52
CLC90_RS14810 3209070 .. 3209091 + -12.3  -5.12707   AAGGCTCTTGAAAGG           CCCGCATGT TGTA GCATGCGGG            TTTTTTCGCGTTTGA 100 172
CLC90_RS14820 3210662 .. 3210673 +  -2.2  -2.77192   TGTAAAAAAGGAGCA                TGCC ATGA GGTA                 ATTATTCAGACCATT  41 13
CLC90_RS14825 NONE
CLC90_RS14830 NONE
CLC90_RS14835 3213689 .. 3213740 +  -7.3  -2.81464   TTGAACTTATGAAAA TCTGGACCTCGGTGAACAGTTAG TGTTTT CTAACTGTAGCCGGAGGTCTGGA TATGATGAATGCTAA  59 45
CLC90_RS14895 3230189 .. 3230206 +    -7  -2.71364   CCATGGCCTAAACGA             TCCGTG CATTAA CACGGA              TCGTTACCCACATCG  56 92
CLC90_RS14905 NONE
CLC90_RS14910 NONE
CLC90_RS14915 3234635 .. 3234657 +  -4.9   -4.2679   GATTAGCCTGGTCAG          GGTGGTGAGT GATA ACTC-CCATC           TTTTGCTAGACGTTA  66 47
CLC90_RS14920 3235733 .. 3235760 +  -3.4  -2.61831   GACATCATGGTGATA        TGCGAAC-AATCC AAT GGATACGTGCGCA        GATTTTTCACATAAG  42 160
CLC90_RS14940 3247194 .. 3247221 + -13.4  -3.46068   TAATTTAGTCACTAT        GCCGCGCCGATC AAAC GATCGGTGCGGA         TCTTTAGGTTCCGAC 100 45
CLC90_RS14945 3248564 .. 3248585 + -15.9  -2.79694   TCCTTGTCGGCTCGT           TCCGCGCCA TCCT TGGCGCGGA            TGCTTGACTCTTCTA 100 142
CLC90_RS14950 3249782 .. 3249799 +  -2.7  -3.31232   TAGTTTGTAAAATAA             CCATTTA ACCT TAAAAGG              ATTTTATATGAAAAA  46 163
CLC90_RS14955 3250032 .. 3250051 + -13.6  -3.67597   TTTAACCATCAAAAA            CGCGGTGA ACAA TCACCGCG             TTCTTCCATAAAACC 100 53
CLC90_RS14965 NONE
CLC90_RS14970 NONE
CLC90_RS14975 3253160 .. 3253174 +  -2.8  -2.69073   ATGGCACACTTTACA               AATGGT GAC ACCATG               TAGCTTATTATCAAT  41 18
CLC90_RS14985 NONE
CLC90_RS14990 3256379 .. 3256393 +   -10  -2.84794   TTATTATAAAGCCAT               TGCCAC TGA GTGGCA               TAGTTCTGCAATTCA  68 138
CLC90_RS15005 NONE
CLC90_RS15010 NONE
CLC90_RS15015 NONE
CLC90_RS15020 3260330 .. 3260352 +  -2.7   -3.1211   TGCAATCCTCTGCCA           TCATGGTTG AAAGG TAACCCTGA           TTGACTAATGTAATA  44 9
CLC90_RS15025 3262031 .. 3262061 + -16.3  -3.53012   TTTGACGATCTACAG       GCAGATCGCCAAC AAACA GTTGGTGATCTGC       TTTAACCGACAGAAA 100 264
CLC90_RS15040 3264977 .. 3264996 +  -2.1  -4.09243   ATAAAGCGGCGAAGA            TGGCAGG CAACTC CTTGTCA             TTTTCACCGGCTATC  55 47
CLC90_RS15045 3265832 .. 3265865 +  -7.3  -3.18023   TAATACGACCAGACG     CACCGATCATGTCGC ATTC GCGCGGAGATCGGTG      TATTGGTCATACTGG  62 38
CLC90_RS15055 3268228 .. 3268249 +  -5.9  -4.49311   TAATTAAATAACAAA           GGGTAAG CGTAATTT CTTACCC            TTTTCTCATCATAGT  73 50
        dkgA 3269840 .. 3269856 +  -9.3  -3.03124   GATGCCGCGAAGCAC              GCCGCGC CTC GCGCTGC              TCTTCCAACGTAGGC  66 353
CLC90_RS15085 3278209 .. 3278230 +  -2.1  -3.55761   ACAATCCCTTCTCCT           CGTAGCGCC AGAT GCCGTAACG            TTTCACCGCTGGATG  47 333
        tolC 3285360 .. 3285391 + -14.5  -3.11569   TTTTGTCGGTTGTCG      TCTCCGGACGCAG TATCTT CTGCGTCCGGATA       ATTTATCTGTCTCTT 100 56
CLC90_RS15125 NONE
CLC90_RS15130 3287490 .. 3287509 +   -10  -4.67353   CCGTAATATGATCAA            GGGAAGGC GAAT GTCTTCCC             TTTTTACATCAATAA 100 48
CLC90_RS15145 3289995 .. 3290014 +  -4.9  -5.63236   AATATCGACAAAAAA            GGGGCTA AATAAA TCGCCCC             TTTTTCTTTTTAAAT  91 69
CLC90_RS15170 3297409 .. 3297429 + -14.7  -4.88918   TTAAATCGAACATTA            TCGGCTGCC ATC GGCGGCCGA            TTTTCTTTGCACTGC 100 53
CLC90_RS15175 3298838 .. 3298857 +  -4.9  -2.79878   GACGCAGAAACAAAA            AGCCCTG CAAATA CAGGGCC             ATTTAGGTGAGTCAC  49 92
        plsY NONE
CLC90_RS15200 3302977 .. 3303004 + -13.4  -3.94823   GTAGTTGCAACGAAG        GCCGTGCTTTCC GAAA GGAATGCGCGGC         TTATTCTCGTTTATG 100 98
CLC90_RS15205 NONE
        rpoD 3306834 .. 3306846 +  -7.7  -2.71011   AACTGTACCCCAAAA                GTTGG ACA CCAAC                TGATTAAGGCGCAGT  60 74
CLC90_RS15215 3307108 .. 3307131 +  -9.6  -3.57825   GCCACCAAATATCAA          GGGCTTACGT GAAA ACGTAGGCTC           TTAGTCTTTTCTAGG  78 34
CLC90_RS15220 3307966 .. 3307996 +  -7.7  -5.63517   CTATTTTATTACTAA       GGCTAGATGTC ACAGAATCC GACATTTAGCC       TTTTTTATTTAGCCA 100 53
CLC90_RS15230 NONE
CLC90_RS15235 3309548 .. 3309558 +  -6.8   -2.7814   TGCCATTATTGGTAG                 CGGA ATT TCCG                 GTTTGACCTGTGCAT  57 53
CLC90_RS15300 3320137 .. 3320156 + -10.6    -4.258   GTATAAAAGCAAAAA            ACCCGGCC AACT GGCCGGGG             TTTCTTAATCAGTAA 100 35
CLC90_RS15325 3336918 .. 3336934 +  -9.4  -3.14132   GCGAAATAAACAGAA              CCCCAC CCAAA GTGGGG              TTCGTCAACGGCAGG  72 88
CLC90_RS15335 3341082 .. 3341125 +  -7.5  -2.98035   CACTTTTAACACGGA TACCGATGCTGGCAAAGGTT GAATG AAGCGT-GCCTGCATCGGTA CATTTTTTGTTTAAT  61 32
CLC90_RS15340 3341790 .. 3341802 +  -5.5  -3.12327   ATCAATTCATTTTCG                CGACC GAT GGTTG                TCTTAACTGTCGGCC  53 60
CLC90_RS15345 3343204 .. 3343229 + -11.1   -5.8096   GCAGCTCAGACATAG         CGGCTGGCGTC TTCC GACGTTGGCCG          TTTTTGTTTTTTATG 100 386
CLC90_RS15350 3344273 .. 3344295 + -13.4  -4.47183   CCTGATAATCTATTA           CACGGGGTGC CAA GCACCCCGTC           TTTATTTGGCTGATA 100 56
        sstT 3345832 .. 3345849 + -10.5  -5.28315   TGATACTCGCAATAA             GGGCGGC GTAA GTCGCCC              TTTTTTACGTTTTCT 100 48
CLC90_RS15380 3352961 .. 3352981 +  -8.9  -5.04249   ATACTCTTTGAAAAA            CCCGGCTGA TAT TTTGCCGGG            TTTGTTTTTTCAAGC 100 57
        exuR 3353973 .. 3353986 +  -5.3  -2.58418   GCAAAATGACCTCCC               TTGCA GGGT TGCAA                ACTTTTCTCTGAGGG  49 41
CLC90_RS15390 3354733 .. 3354746 +  -3.9  -3.48593   AGATATTCCGTTTTC               GTTAT CATA ATAAC                TTATATAAAAAAATA  51 16
CLC90_RS15395 NONE
        mzrA 3355941 .. 3355966 +  -7.5  -3.05769   GCTAATACTTCTCTC         TACGGGGGAAT CATC ATTCCCCCGCC          TATCTGATTTGACCG  61 36
CLC90_RS15405 NONE
CLC90_RS15410 NONE
CLC90_RS15415 NONE
CLC90_RS15420 NONE
CLC90_RS15425 3358487 .. 3358508 + -14.5  -3.97307   GCGGTTAATCTCTAG           CGCCCTATC ATCA GATAGGGCG            TTGTTATTGGGTGGG 100 50
CLC90_RS15435 3360691 .. 3360703 +  -7.7  -2.81547   CCGGTAAGCCGGGTT                CTGTC GTG GACAG                TCATTCCTCTAGGCC  59 427
CLC90_RS15455 3364093 .. 3364112 +  -9.2  -3.10164   CCTAGGGGTTTTAGT            ACCCCGTC TCAG GACGGGGC             TTAAATAATGGATAA  72 48
CLC90_RS15460 3364492 .. 3364512 +  -7.5  -3.72073   GCGGATTGATCATTC            TTCTCCGGC AAA GCCGGGCAA            TTCATTTTACTGAGT  68 32
        diaA NONE
        yraP 3365727 .. 3365751 + -11.5   -6.2845   GTAAAATAAACACCA          GTGAGCCTGAT TTT GTTAGGCTCAC          TTTTTTTTTCTAGTT 100 32
CLC90_RS15500 NONE
CLC90_RS15505 3377560 .. 3377582 +  -3.4  -4.05033   AGCCGTGGATTTATC           GTTATGACTC ACC GATACATAAC           TTTCTCTAGCGTGAG  56 174
CLC90_RS15510 3378489 .. 3378533 +  -5.5  -3.04517   CAGGTCGGCCACTGC GGGAAGGCGGTGGAGGCTC ATCATCA GTGCCGCCATCGCTATCCG ATTTTGCCGAAGAAT  51 135
CLC90_RS15545 3382926 .. 3382955 + -13.7  -5.04868   ATATCAGTCCCTTAT       CCGGATAGCGT TCCTACTT ACGCTATCCGG        TTTTCTTTAATTTAC 100 47
        degQ 3384570 .. 3384596 +   -13  -3.11459   TAATTTGCAGAAAAA         TCGGACACAGTG CAA CGCTGTGTCCGC         TTAACTCGTGCTATT  95 38
        degS 3385750 .. 3385776 +  -7.3  -5.06414   AATTACAATAAAAAA        GCCAG-CCGGTT AAAG AACCTGACTGGC         TTTTTATTGGAGCGG  89 54
CLC90_RS15595 NONE
        kdsD NONE
        kdsC NONE
        lptC NONE
        lptA NONE
CLC90_RS15620 3395269 .. 3395284 +  -4.6  -2.94464   AAGCGCGTCTATTTA              GGCGAA GAAT TCCGCC               TCTGATATTAGTCTT  50 5
CLC90_RS15625 3396751 .. 3396767 +  -3.7  -3.53012   CATCCCGCCGTCTAA              CCAAC GTAAACA GTTGG              TTTGACCCGAACAGA  51 4
CLC90_RS15630 3397136 .. 3397154 +  -4.6  -3.05596   AGGTTCTTCACTCAC             TGTAGC CAGTCGC GCTACA             TTACCTGAACCGGTG  50 78
        ptsN 3397751 .. 3397780 +  -3.5  -3.05644   TATTATTTTCCAATG       ATGGATTCCGGCA AGTA TGCCGGAATAAAA        GTTTCTAATTGTGGC  46 66
        rapZ NONE
CLC90_RS15645 3399307 .. 3399323 + -13.7  -6.02914   AACCGATCTTATCAG              GCCCCTC ATT GAGGGGC              TTTTTTTTGTCTGCG 100 377
        pyrB NONE
CLC90_RS15655 3400882 .. 3400911 +  -2.7  -4.55287   CATTGCAGGATTTTA       TGCG-GCGGGGACT GTG AGGCACCGCACCCA       TTTTATGTCCCTGGG  61 59
CLC90_RS15660 3401433 .. 3401444 +  -4.4  -2.78384   CGGCTGAAAAACCTC                GATC CAGC GATC                 TCTGGTGGGGGAAAC  46 66
        mgtA 3409680 .. 3409692 +  -3.3  -4.01045   ACCTTGCTTCCGAAT                CCTGG AAC CCATG                TATTTTTCATAATAT  58 520
CLC90_RS15690 3411211 .. 3411237 + -10.8  -4.72029   CGATAAATCAGTAAA         GGGTGGCAGCTC GAC GAGCTGTTCCCC         TTTTATTCGCTTGGA 100 79
CLC90_RS15705 3414406 .. 3414417 +  -5.8  -3.56092   GTTTGAGAAACGATC                GCCA CCAA TGGC                 TTTCCCCGGTAATAC  59 511
        aaeR 3420833 .. 3420843 +  -2.4  -3.90744   CCCACCCCCACAGGC                 AGGC TTT GCCC                 TTCTTTGCCGCAGAC  52 130
CLC90_RS15790 NONE
        msrP NONE
        msrQ 3437066 .. 3437076 +    -4  -3.17941   TGATAAGACCAGTAT                 TTAG CTG CTAA                 TTGCTACGATATCAT  49 124
        aroQ NONE
CLC90_RS15810 3438162 .. 3438172 +  -3.2  -3.17688   TCATCGAATAACGAG                 GCGT TCC ATGC                 TTGATAAAATCGTTA  46 30
        accC 3439540 .. 3439557 + -12.7  -5.79595   TTCGCCTCATGTTAA             GGCCGGT TAAT ACCGGCC              TTTTTTATTTTACGG 100 47
CLC90_RS15820 NONE
CLC90_RS15825 NONE
CLC90_RS15830 3442335 .. 3442368 + -10.1  -3.65201   TCCTACCTTGCTTCT     CCCCGCCGACAGCAT CAAC AAGCCGCTGGCGGGG      TTATTCACCCTATTC  80 41
        dusB NONE
CLC90_RS15840 3444120 .. 3444143 + -12.4  -5.56673   GGTGTTGTTTAAAAA          GGCGTACTCC ACAC GGAGAACGCC           TTTTTTATTATGAGT 100 55
CLC90_RS15850 3446149 .. 3446176 +  -9.8  -3.21726   TACATCCTTGTCGGC        TTGTCCGCGCTA TCTC TGGCGCGGACGC         TTGACTCTTCTACCG  74 143
CLC90_RS15870 3449221 .. 3449231 +  -3.2  -4.09117   TCCGCCCGTCTAACC                 GGTT ATC AGCC                 TTCTTTCTCGATCAA  58 60
        uvrA 3457519 .. 3457545 + -13.1  -4.44046   GCAAGTCATAGGTTA         TTGGGGGCGAT AATAC ATCGCCTCCAA         TTTATTTCACATCCA 100 30
CLC90_RS15920 3463403 .. 3463424 + -10.2  -4.86033   TGACGCCAATAAAAA           TGGGTTCC GTTTCA GGAACCCA            TTTTTATAACGCTTT 100 54
CLC90_RS15935 3466104 .. 3466136 +  -9.8  -2.99874   GCATATTAATGCGTA      TACCACGCAGCACC GGTAA GGAGCCGTGTGGTA      TCTATGCTGGTTTCT  73 194
        plsB 3469968 .. 3469996 + -13.3  -3.18264   ACCAGAGCATAGCGA        CAAAAAAGGCCAG ATT CTGGCCTTTTTTA        TTGATCGCTGGCAAA 100 43
        malE NONE
        malF NONE
        malG 3480019 .. 3480037 + -13.1  -5.92399   GTAATGTGTCTTTAC             GGCGGCC TTTAT GGCCGCC             TTTTTTATTTTATTC 100 137
        lysC 3484363 .. 3484383 + -14.7  -2.70389   AATAAATAACAGTCA            GCCGGAGGG TTA CCTTCCGGC            GCTTTTTCATCTTGG 100 36
CLC90_RS16015 3486623 .. 3486633 +  -5.4  -3.31144   ATTAACCCACACAGC                 CGTT GTT AACG                 TTATCAAAATGGGAA  55 51
CLC90_RS16020 3491594 .. 3491619 +  -8.9  -5.42862   TCTTGAAAAACAAAA         CCGGTGCTGCC TGAT GGAAGTGCCGG          TTTTTTTGAGCCTGT 100 60
CLC90_RS16025 3492968 .. 3492984 +  -5.1  -3.93177   ATCACACAGAATTAT              GGACAGG CTC TTTGTCC              TTCTTGATGTTTTTT  63 51
CLC90_RS16035 3500921 .. 3500941 + -18.3  -4.45083   TTGGTTTTTGGGTTA            CCCGCGCCT TTG AGGCGCGGG            TTTTGTCCATCTCAG 100 94
CLC90_RS16130 NONE
CLC90_RS16135 NONE
CLC90_RS16140 NONE
CLC90_RS16145 3529641 .. 3529652 +  -4.4  -3.21276   AATAAGTCCCACTTC                TGCT TTGT AGCA                 TATTATCGGCCGAAC  49 296
CLC90_RS16150 3530869 .. 3530894 +  -5.3  -5.04385   TAAAACTCGTGAAAG         TAGGCACTGCC TGAT GGAAGTGCCGG          TTTTTTGACCCTGTA  78 85
        iclR 3536738 .. 3536754 +  -3.6  -2.60032   AAATACCACCCGTCC              ATGGCG CGTCA CGCCAA              AATTTTTAAACAACA  42 480
        purH 3551096 .. 3551107 +    -3  -2.92061   AACCGCTTAACGGAG                TCAT CCTG ATGA                 ATATTTTGATTATTG  44 44
        purD 3552415 .. 3552443 +  -4.5   -4.4768   GTTTTAGTCAGAATG        GCAGAGGGTGT CGCGTTT GCGCCCTCTTC        TTTATTATATTAGTG  68 53
CLC90_RS16265 3557771 .. 3557781 +  -6.8  -2.63164   TCCAACCGCGGCAGA                 TGGC CGC GCCA                 GTTAATTCAATCTGG  56 10
        thiC NONE
CLC90_RS16275 NONE
CLC90_RS16280 NONE
        thiS NONE
CLC90_RS16290 NONE
        thiH 3563745 .. 3563762 + -12.7  -3.61764   TTCAGACAAAAAAAA             CCGCTCC CAAA GGAGCGG              TTTGCAGGTTGGTGA 100 44
CLC90_RS16365 3579493 .. 3579513 + -11.9  -4.69214   TGAGAAAATAAAATA            TCGGGAGAT ATC GTCTCCCGA            TTTATTTATTAAATA 100 30
        fadB NONE
        fadA 3595668 .. 3595684 +  -7.9  -5.60993   GTTGCCGTTTTTCCC              GCCTGTC AGG GGCGGGC              TTTTTTTCTCCACCG 100 101
        rfaH 3600009 .. 3600032 +  -8.2  -2.77182   AAAGCTATTTAGCAA          GGCAAGTG CGATGCAA CACTTGCC           TCATTAGGTATCAGC  64 39
CLC90_RS16515 3614490 .. 3614506 +  -8.7  -3.09933   GGGATTCGCTGTGCC              GCTTTGC GCA GCAAGGC              TTCAATCCATTCGAC  64 399
        metR 3617695 .. 3617707 +  -3.4  -3.43042   CCGCCAATGATAAAA                CTCA GCCAG TGAG                GTTTTTCCTGCCAGA  49 31
CLC90_RS16535 3619067 .. 3619082 +  -3.2  -2.93585   CCAATTTAACAATTC              TCTGGC TTGC GCTGGA               TGGTTTACCGTGTAG  45 159
CLC90_RS16565 3625079 .. 3625098 +   -10   -4.3129   ATAAAGAGTGAATTA            GACGGGGT GAAA ACTCCGTC             TTTTAGTCATAAATA  93 47
CLC90_RS16570 NONE
CLC90_RS16575 NONE
CLC90_RS16580 NONE
CLC90_RS16585 NONE
CLC90_RS16590 3630531 .. 3630543 +  -4.1  -3.35996   GGACTTATTTCATTG                TCTGA GGC TCAGG                TTATACCTGAGCCTC  51 72
        panM 3636875 .. 3636885 +  -8.2  -4.82901   ATGCTGACCATCTCT                 GGCG TAG CGCC                 TTTTTGTGGCCCGAA  88 514
CLC90_RS16660 3645535 .. 3645547 +  -6.3  -2.63616   AATGCGGTACAGGAG                CAACA AGA TGTTG                ATTAATCTTGGTCGT  54 8
CLC90_RS16665 3645872 .. 3645895 +  -9.6  -3.08312   GAAATCAATATATCG          GGTACCTTGT AATT GCAAGGTGCC           TTGCGTACCTGGGTT  69 83
CLC90_RS16680 3647645 .. 3647672 +  -7.6  -5.54907   CCTTTACTTGTAACC        CCTACGCCCCAC GCTA GTGGGGTGTCGC         TTTTTATTTTGTCCG 100 28
CLC90_RS16685 3650138 .. 3650164 + -14.5  -3.74224   ACCTCCTTGTCGGCT        CGTTCCGCGCCA TCCC TGGCGCGGA-CG         TTTGACTCGTTTGCC 100 108
CLC90_RS16695 3651444 .. 3651469 +  -4.6  -2.80935   GGGTTAACTCGTAAG         GGTGGCCG-GC CTTGC GCATGGCCCCC         TGTCATGCATAGAAT  49 47
CLC90_RS16700 3652145 .. 3652172 +  -5.4  -2.85668   AACCGGTTAAGCGTT        AAGAGAGCGCGG ATCA CCGCGCTCTGAA         TATGCTATGCCAATG  50 40
CLC90_RS16720 3656667 .. 3656677 +  -5.4  -3.25204   ATGCCATTGGAGGCA                 CTCA TGT TGAG                 TATATTTAAGCCTAC  55 186
CLC90_RS16725 3658053 .. 3658082 + -12.1  -5.26316   AGTCTCTGTGTTTCA       GGCCGTGCCGTTA TATT TGGCGACACGGCC        TTTTTTGTACCCTAA 100 53
CLC90_RS16730 3659457 .. 3659476 + -12.2  -3.15197   TTGTCATTAACCTCA            GGGCGATA ACAC TATCGCCC             TGTTAACCTTTATTC  86 283
CLC90_RS16760 3665831 .. 3665844 +  -2.4  -3.32432   TCGGCACGCTAACTT               CAGT ACACTC ACTG                TCTCTCTTTTCTGTA  45 78
        rarD 3666779 .. 3666801 +  -6.9  -2.70932   TGTCCTGAAATATCA           TGCCCGTCG ATCGG TGTCGGGCA           TGATTAACCCGCCGG  56 45
CLC90_RS16775 3668709 .. 3668730 + -11.6   -3.6608   AACCACGTAAAAAAA           CCGGAGTC CCAAAA GACTCCGG            TTTGACTACCCTGCT  90 40
CLC90_RS16790 3672093 .. 3672115 + -12.8  -2.65906   TACCGTACAAACGGC           GACTTTCTGC ATA GCAGAGAGTC           AATTTTTGCATTGCG  81 372
        cyaY 3678004 .. 3678018 +  -4.2  -4.62441   GCAGTTGGAACTGTT               GTGCTG GCG CAGCAA               TTTCTTTCTCTGGCG  68 105
CLC90_RS16835 NONE
CLC90_RS16840 NONE
CLC90_RS16845 NONE
        hemY 3684891 .. 3684904 +  -8.1  -5.49579   CTATGCTTGAGATAG               GCTCC TGCG GGAGC                TTTTCTTTTTTCTGC 100 49
CLC90_RS16855 3685718 .. 3685732 +    -7  -4.65078   AAAGACGAAAAAAAA               CCCCGC AAT GCGAGG               TTTTCTTCGAAATGT  79 39
        rhlB NONE
         ppx 3706516 .. 3706533 + -11.3  -4.68424   TTGAGCACGAATGCT             GGCCAGA TGAC TCTGGCC              TTTTTGCATCCGTTC 100 204
CLC90_RS16970 3709002 .. 3709018 +  -6.5   -5.8187   GCAGACAATGAAAAA              CCGGC TATTCGC GCCGG              TTTTTTTATTCAGTC 100 57
        ilvY 3711637 .. 3711654 +  -6.9  -3.58037   ACTAAAAACAGAAAA             GGCAGAG TTTC CCCTGCC              TTTAACGAATTAATA  65 47
CLC90_RS17000 3718182 .. 3718204 +  -8.4  -3.75153   GCCGATGATGTGAAC           GGTGGGGTGT ACA ACACGCCATC           TTTCACTTCAAACAG  75 245
CLC90_RS17025 3722906 .. 3722933 + -17.2  -3.22774   CATAAAGCTCTGATA        TGAAAATGGGGC TCAC GCCCCATTTTCA         TTAATCATCGCTGTC 100 23
        hdfR 3724336 .. 3724356 +  -8.3  -3.14963   GATGCCAATGACCGT            CTTTGCCCA CTA TGGGCAAAC            TTAGCTAATTATCAA  67 142
        trmA 3737379 .. 3737397 + -10.3  -3.66349   TCGACCCAACAAAAA             GGGCAAC ATCAC GTTGCCC             TTGCTTATTTCATTT  82 41
CLC90_RS17110 3740310 .. 3740323 +  -3.8  -3.14602   TTTCTAAACTGGTAG               CACG GAAATG CGTG                TCTTCATCGGCTCCG  48 265
CLC90_RS17120 3741886 .. 3741905 +  -7.8  -5.80817   CAACGTGAAGTATTT            TGGTAGGC CTCG GCCTACCC             TTTTTTTCTGTTAGG 100 63
CLC90_RS17125 3743388 .. 3743420 + -11.4  -4.33274   ATAAGTTTCAATCTT      TAGCAAAACCGGGT CCAAA GCCCGGTTTTGTTG      TTTTCATGATCTGAC 100 37
CLC90_RS17130 NONE
CLC90_RS17135 3744460 .. 3744471 +  -2.2  -4.38748   AAACTTGATGATCGC                CGTG CCTT TACG                 TTGTTTATTTCTAAC  61 328
CLC90_RS17185 3758188 .. 3758213 +  -4.1  -4.19704   ATTGGAATTGAACGT         GGC-GAGATT CGTAATC AATCTCAGCC         TTTTGGGTGAAATTA  61 226
CLC90_RS17190 3761088 .. 3761116 +   -11  -3.21726   TACGTTCTTACCCGC       TCGTTCCGCGCCA TCCT TGGCGCGGA-CGC        TTGGCTCTTCTACCG  79 154
CLC90_RS17195 3761715 .. 3761750 + -14.1  -4.18197   TAATTGATTTATTGA    GACACAGAACCCACT CTAATC GGCGGGTTCTGTGTC     TTTTCGCTACGGCCT 100 38
CLC90_RS17205 3764528 .. 3764582 + -14.4  -4.62069   CAGTTAGAGGGTTAT CCTTCGGCATTTCCCGGTAATAACTG CCC CAGTTATCGCTGGGAAGTGCCAAGAG TTTTTAAAGTACGCA 100 224
CLC90_RS17215 3766405 .. 3766419 +  -3.5  -3.07227   AGCCCCATTTCATTG              GCGGCC TCAA GGC-GC               TGTATCATTTGCTGA   0 347
CLC90_RS17200 3761575 .. 3761590 -  -4.7  -5.60993   TGTTTGATAAAAAAA              TGGCT CCTATC AGCCA               ATTTATGACCGCAAT  93 192
CLC90_RS17180 3755588 .. 3755610 -  -2.1  -2.75844   TCTTTTATGGCAAAT          TTCGCAACCA TCCC TGGTTA-GAA           TAGAGCCTGAGTTTC  41 20
        argB NONE
CLC90_RS17170 3753443 .. 3753454 -  -3.6  -3.25942   ATGGGCGCAGACTAA                GCCG CACC CGAC                 AAATCACAACATTAC  49 37
CLC90_RS17165 3751960 .. 3751983 - -14.6  -3.96327   ATTCTTCATGATAAA          GCGGATGGCA GAAA TGCCACCCGC           GACGCGGAGGGAATC 100 43
CLC90_RS17160 3749150 .. 3749161 -    -3   -4.1964   CTGAAGACTTTAAAA                TTTG TATT CAAA                 GCCCCCCTGGATAGT  58 8
CLC90_RS17155 3748367 .. 3748405 -  -2.5   -4.3129   CAGCGACCAGTAAAA   TCACCACCACACC CGGTGTTCCTATT GATGCAGTGGTGA   ACTTTCTATGCGGCT  59 69
CLC90_RS17150 NONE
CLC90_RS17145 3745113 .. 3745126 -  -3.1  -3.34895   TTTATTTTCAATCAA               TGACA TAAC TGCCA                TTGAGTAACCCGCCA  47 42
CLC90_RS17140 3743964 .. 3743978 -  -8.5  -3.34962   CCCTAGACGGCATAA               CGGCG CTGGT CGCCG               ATGTCTTGGCAGAAA  66 291
        oxyR 3739739 .. 3739765 -  -5.3  -2.62616   CCATTCCTGAGATCA        GTT-CTG-TCGGT AAA ACCGAACAGGAAC        TGACAGCGATGAAAG  48 313
        fabR NONE
CLC90_RS17100 3737379 .. 3737397 -   -11  -5.10461   TCGACCCAACAAAAA             GGGCAACA TCA CGTTGCCC             TTGCTTATTTCATTT 100 58
        btuB NONE
CLC90_RS17085 3733126 .. 3733136 -  -5.4  -3.08046   TTTTTAGGCGAAAAC                 CGAT TAA ATCG                 CTAGTTTTTTCAGCG  53 18
CLC90_RS17080 3731054 .. 3731077 -  -5.2  -3.81929   CAACAAGGTACTAAA          GCCCGACCAA TTTC TCAGTCCGGC           CTTATTTGCTCGTTA  61 82
CLC90_RS17075 3730914 .. 3730931 -  -2.7  -2.66291   CACACAGTGACATGA             CGTTGAT GGTG ATAAACG              AATGCCGCTGCAACG  41 57
CLC90_RS17070 3730717 .. 3730765 -  -9.2  -3.45839   ATTGTTAAAGAGCAA TATTTCACAACACACTGCTCACC TTGC GGT-AGCAATACGTTTTGAAATA GTTTTTTTATATGGT  76 37
CLC90_RS17065 3727507 .. 3727517 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 12
         rrf NONE
CLC90_RS17055 3727081 .. 3727108 - -12.9  -3.08349   AAATAACGCTTAACA        TTATGCCTGCT AAGATA AGCAGGCATAA         TTTAGATAAGTGGCG  95 36
CLC90_RS17050 3726961 .. 3726980 - -11.4  -5.96894   ACGCAAATAAAAAAA            CCCCTCGC TTTC GCGAAGGG             TCATTTATATGGCAG 100 35
CLC90_RS17040 3724279 .. 3724289 -  -4.6  -3.36117   TGAATCATATAAAAT                 GCGC TTA ACGC                 CTTCTGGCGTGACGA  53 154
CLC90_RS17030 3722912 .. 3722927 - -10.4  -4.34402   GCTCTGATATGAAAA              TGGGGC TCAC GCCCCA               TTTTCATTAATCATC 100 32
CLC90_RS17020 3720831 .. 3720854 - -13.8  -5.45652   ACGGCCAATAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TTTTCTTGAGATTAA 100 51
CLC90_RS17015 NONE
        ilvM NONE
CLC90_RS17005 NONE
CLC90_RS16995 NONE
        ilvA 3714367 .. 3714385 - -11.7  -4.73105   AGTCACAAAAAATAA             GGGAGGC GATTA GCCTCCC             GATAATAGACATTGG 100 46
CLC90_RS16985 3711637 .. 3711654 -  -9.1  -5.00027   ACTAAAAACAGAAAA             GGCAGAG TTTC CCCTGCC              TTTAACGAATTAATA 100 56
CLC90_RS16975 3709002 .. 3709018 -  -6.5  -4.96646   GCAGACAATGAAAAA              CCGGC TATTCGC GCCGG              TTTTTTTATTCAGTC  84 88
CLC90_RS16965 3706177 .. 3706198 -  -5.7  -2.78384   GCCGCCGGGATGATA           CGTTGCCTG CAGT CAGGCTGCG            CGCCAACGGCGATAC  52 307
        trxA 3702798 .. 3702814 -  -2.1  -3.33922   AGCTTGCGCAAAAAT              CGCACTC AAC GACGGCG              TTAGATTGAAGGTAC  45 313
         rho 3701366 .. 3701385 - -10.7  -4.70879   TCCAAACGTGAAAAA            CGCCACG ACTGAG CGTGGCG             TTTTGTTCGTTTTAT 100 46
CLC90_RS16940 NONE
CLC90_RS16935 3698905 .. 3698923 -  -5.2  -3.06796   TTTTAGGTCAGTTAA             CCGCAGAC AAA GCCTGCAA             GTTGGGCGCTTATGC  52 54
CLC90_RS16930 NONE
CLC90_RS16925 NONE
CLC90_RS16920 3695357 .. 3695383 - -11.7  -3.63991   TATGACCTGCAACAA        CGCGCTG-TTCA AAAC TGAAGCAGCGCG         TTCGATGGTCTTGCA  90 68
        rfbA NONE
CLC90_RS16910 NONE
CLC90_RS16905 NONE
        wzxE NONE
CLC90_RS16895 NONE
CLC90_RS16890 NONE
CLC90_RS16885 3688012 .. 3688049 -  -3.6    -4.564   AACTGCAAATTAAAA   CCTTATGGAATATAAA AATAAA TTGATATTCCAAAAAG    AAATAAGAAACGATG  65 114
CLC90_RS16880 NONE
CLC90_RS16875 3686066 .. 3686082 -  -3.7  -2.56596   GGCTCTACCAACTGA              GCTATAG CCA CCATAAC              TTCTTACTACTTTAC  44 92
CLC90_RS16870 NONE
CLC90_RS16865 NONE
CLC90_RS16860 3685718 .. 3685732 -  -9.2   -5.9663   AAAGACGAAAAAAAA               CCCCGC AAT GCGAGG               TTTTCTTCGAAATGT 100 40
CLC90_RS16830 3677946 .. 3677965 -  -5.7  -3.37975   ACCCACTACGCAGAA            GGACACA AAACAA CGTGTCC             CTCATTTTGATAAAA  57 44
CLC90_RS16820 NONE
CLC90_RS16815 NONE
CLC90_RS16810 NONE
        xerC NONE
        yigB 3673975 .. 3673986 -  -7.2  -3.13906   GGTAAGGGAAAACCA                CCGG GTCG CCGG                 AGTGACCGGACGACC  62 82
CLC90_RS16795 3671749 .. 3671774 - -11.9   -3.0644   AGCTAACGGGTAATA         TGCGGCAGCAT TCTC ATGTTGCCGCA          CTCAGATTTACACAG  86 33
CLC90_RS16785 NONE
CLC90_RS16780 3668709 .. 3668730 - -12.3  -5.49729   AACCACGTAAAAAAA           CCGGAGTCC CAAA AGACTCCGG            TTTGACTACCCTGCT 100 104
        corA 3666776 .. 3666804 - -10.3  -3.34715   CACTGTCCTGAAATA        TCATGCCCGTC GATCGGT GTCGGGCATGA        TTAACCCGCCGGCTT  78 39
CLC90_RS16755 3664186 .. 3664201 - -11.8  -3.05844   TCTTGGATCTGAACA              GGCCGG TTAA CCGGCC               TGTGTATGATTCTGA  86 58
        recQ 3662232 .. 3662243 -  -4.4   -2.6078   ATTAACATGAAGGTA                TTCC GACA GGAA                 ATAAAGAAGAGGAAC  45 110
        rhtC 3661404 .. 3661416 -  -2.7  -3.41913   GGCACATCTAAAAAG                CAATA GCG CATTG                TGCCACAAATTTAAC  48 213
CLC90_RS16740 3660280 .. 3660290 -  -5.4  -3.82262   AATCGGAAGCAACAA                 CATG ATA CATG                 GCGGTGTTCTAACCT  61 34
        yigL 3659270 .. 3659289 - -12.2  -3.40052   ACAGTGGTAACAACA            GGGCGATA ACAC TATCGCCC             TCAGACTGCTGACAA  89 222
CLC90_RS16715 NONE
        glpB NONE
        glpC 3652149 .. 3652168 -   -15  -3.06261   GGTTAAGCGTTAAGA            GAGCGCGG ATCA CCGCGCTC             TGAATATGCTATGCC 100 34
        tusA 3650266 .. 3650278 -  -6.3  -3.64703   TTTCGTCTACGTAAA                TAGTC AGT GACTA                ACCCTGTATACCTTT  63 23
CLC90_RS16675 NONE
CLC90_RS16670 3645716 .. 3645732 -  -9.4  -2.81476   ACCCAGCCAAAAGAT              CAGCCG ATCAG CGGCTG              GCAGCAAGTCAGGAT  65 111
        ftsY 3643111 .. 3643121 -  -3.2  -2.72511   CTGACCTGTTCAAAG                 CGAA TCA TCCG                 TATTAATCCTCTCGG  42 28
        ftsE NONE
        ftsX 3641344 .. 3641356 -  -6.3  -4.46212   GCTTTCACCATAAAA                GTTCA ACG TGAAC                CAGAAGTTTTAGTTG  74 176
        rpoH 3640299 .. 3640331 - -10.1  -5.61824   GAAAATCGAAAAAAA     CA-AAAGGGCGATA TCTTAT TATCGCCCTTTCTG      GTGTTTACGCTTTAT 100 46
CLC90_RS16635 3638845 .. 3638856 -  -4.4  -2.91199   TAATTTTCAAGGAGA                TCTG ATAT CAGA                 TGGCCTCAAAATCGA  47 166
CLC90_RS16630 NONE
CLC90_RS16625 3635884 .. 3635894 -  -6.8  -4.14392   TTTTAACTCGGAAAA                 TGCG CAG CGCA                 AAAAACATTTTCCGC  71 486
CLC90_RS16615 3634381 .. 3634399 -   -11  -3.43773   CTGGATATGGAAACA             TCCCCCAA AAT CTGGGGGA             TACATTGCGGGTAAA  83 97
        livH NONE
        livM NONE
CLC90_RS16600 NONE
        livF 3630101 .. 3630114 -  -3.7  -5.56568   ATAGCAGCAAAAAAA               GCCGG ATTT CAGGC                CGAAATTATGGCGCC  89 524
        ugpB 3622584 .. 3622624 -  -5.6  -3.84961   TATTGAAGCATTAAA TCGCGCTC-CCT-CATTGCT ATC ATCAATACAAGAGAGCGCGA TCTTCCCCACATCAG  63 53
        ugpA NONE
        ugpE NONE
CLC90_RS16545 NONE
CLC90_RS16540 3618963 .. 3618994 - -11.6  -3.10622   TAGCGTCAAAATAAT      GACTGAGCTAACCG TCAT CAGGTAGCTCAGCC       GTTGGCAAAATCCAC  84 20
CLC90_RS16530 3617438 .. 3617450 - -10.5  -3.05844   GCGCGGATGGGAATA                GCGGC TTT GCCGC                ACTGGGTGGTGGAAA  76 152
CLC90_RS16520 3614154 .. 3614169 - -11.8  -4.60487   CATCAGCGTGAAAAA              GGGCGC TTAC GCGCCC               TGAGGTTTAATGACA 100 210
CLC90_RS16510 3612117 .. 3612137 - -10.4  -3.65446   GAAGGAAAGAATGAA            CGGGCTAC ATGAA GCAGCCCG            TCACAGGAATTACAG  82 35
CLC90_RS16505 3611199 .. 3611222 -  -8.8  -5.09204   AGACCTGAAGAAAAA          GCTGACGGGG AATT CACCGTCAAC           AACATGATATACATC 100 64
CLC90_RS16500 3609174 .. 3609201 - -13.5   -5.5074   TAACTCAACAAAAAA        CAAACGGCCGG TGAATG CCGGCCGTTTA         AATTAAGGTTAATGC 100 56
CLC90_RS16495 3608554 .. 3608564 -  -6.8  -3.37513   ACATCCCAACAGCAA                 CCGA CAA TCGG                 AGCTACCCTATCCAA  61 28
        rmuC 3606761 .. 3606776 -  -6.1  -2.64747   GGAGTGTACCAGAAC              TGGGG GGAAAG CCCCA               CTTCGCCTAACGTTG  54 94
        ubiE NONE
CLC90_RS16480 NONE
        ubiB 3603583 .. 3603593 -  -2.4  -3.14051   TCACCTTTATTAACA                 GGGG TTA CTCC                 AAAGATGGCCGCATT  43 121
        tatA 3603282 .. 3603297 -    -4   -2.8478   AGCAGTTCACTAAAT              CCGATGT CAA ACA-CGG              CTTACACCTGCTCTT  46 27
        tatB NONE
        tatC 3601888 .. 3601906 - -13.1  -2.94337   TATTCCAAAACAGCA             GCCGCCC GAAAA GGGCGGC             TTAAAGGAAACTGGC  95 45
        tatD 3601096 .. 3601108 -  -6.9  -3.57106   CCTAACTCAAACCAA                CCGGA AAA CCCGG                CGAGCGTTTTCAGCA  63 4
        hemB 3600009 .. 3600032 -  -8.9  -3.19656   AAAGCTATTTAGCAA          GGCAAGTGC GATGCA ACACTTGCC           TCATTAGGTATCAGC  69 43
CLC90_RS16440 3598061 .. 3598073 -    -2  -2.66257   TTAAAAATGAAAACG                TTGT TAGCG ACAA                ATGTCGCATAGCTCC  40 114
CLC90_RS16435 NONE
CLC90_RS16430 3595744 .. 3595758 -  -7.1  -4.49958   ACGCTATCAAATAAA               GGCGA AGGCA TCGCC               ATAGATATGCGTTTC  78 2
CLC90_RS16415 3590503 .. 3590515 -  -3.3  -3.54475   GCTGGTATGAGATAA                GGCTG CAT CAGGC                CAGATTCAGATCACG  49 20
CLC90_RS16410 NONE
        trkH NONE
CLC90_RS16400 3587449 .. 3587478 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TATGCATTCGAAC CGAA GTTCAAATGTGTA        CTGCTTTGGTCACTC  48 400
CLC90_RS16395 NONE
CLC90_RS16390 3585562 .. 3585599 - -10.9  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTT GTTA AAGTCATCTTTAAGATA    TTCAGGTGATAATGT  83 59
CLC90_RS16385 3582352 .. 3582362 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 12
         rrf 3582102 .. 3582122 - -10.4  -4.84527   CGCACATAGCAAAAA            CCCCACGC TTTTG GCATGGGG            TTTCGGCTTGATTTG 100 43
CLC90_RS16375 NONE
CLC90_RS16370 3579491 .. 3579515 -  -8.6  -5.19275   ATTGAGAAAATAAAA          TATCGGGAGA TATCG TCTCCCGATT          TATTTATTAAATATC 100 39
CLC90_RS16360 NONE
CLC90_RS16355 3577737 .. 3577756 -  -2.8   -4.3208   CTGCAGAATCTAAAA            GGAAG-GGC GTG GCCTCTTCA            CTCTTGAAAGGTTTT  59 106
CLC90_RS16350 3577603 .. 3577613 -  -3.2  -2.56596   CGCTCTACCAACTGA                 GCTA TAT CAGC                 ACATCTTGGAGCGGG  42 32
CLC90_RS16345 3577475 .. 3577488 -  -6.7  -2.57468   TTTCACCACATCAAC               CAAGC AAAT GCTTG                CTGAATCCATTACGC  56 75
         tuf 3576204 .. 3576221 - -11.3  -4.93318   CACAACGTAGAAAAA             GGGCATC AAAT GATGCCC              TTTTACCGCATGTCG 100 50
        secE NONE
        nusG 3575014 .. 3575042 - -10.4   -5.2853   CATCTAAAAACAAAA        GGCGCGAAATTA TATTT TAATTCCGCACC        TGATACAAGACTCAA 100 66
        rplK NONE
CLC90_RS16320 3573456 .. 3573474 - -14.6  -3.14132   TTGCTCCTGGATTAA             CCGGGGAA TAA TTCCCCGG             AACTCACATCACCCA 100 331
CLC90_RS16315 3572935 .. 3572945 -  -4.6   -3.1637   ACAGAGGGCGATTAA                 GCCG CTT CAGC                 TTCTTTCTGATCACG  51 11
CLC90_RS16310 3572433 .. 3572457 - -18.7  -4.64766   CCTACAGCGCAAAAA          GGCTGGTGACT AAA AGTCACCAGCC          ATCAGCCTATAAAGT 100 65
        rpoB 3568096 .. 3568111 -  -2.5  -2.83715   CGTACCACCAGCAGA              CTCCC GGCTGT GAGAG               CCTGCCGTCTGGAGA  42 45
        rpoC 3563745 .. 3563762 - -12.7  -6.02914   TTCAGACAAAAAAAA             CCGCTCC CAAA GGAGCGG              TTTGCAGGTTGGTGA 100 53
CLC90_RS16260 NONE
CLC90_RS16255 NONE
CLC90_RS16250 3554295 .. 3554308 -  -3.9  -4.07246   GTACCCGAAATTAAA               TCATA TACC TATGA                GAGAAAGCCGCCTCA  58 306
CLC90_RS16245 3553501 .. 3553514 -  -4.5  -2.72144   TTATCGTTTGCAAAG               CATCG AGTG CGACG                GATATGCCGATTGAC  48 165
CLC90_RS16240 3553146 .. 3553158 -  -4.7  -4.99043   GGCGCATAAACAAAA                GGGGC TTT GCCAC                CCCCTCGTTTATTAT  77 60
CLC90_RS16235 3551990 .. 3552008 -  -3.8  -3.57144   TTGGCGACCCGGAAA             CACAGC CAATCAT GCTGCG             GATGCGTTCTGATCT  52 501
CLC90_RS16220 3548766 .. 3548795 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TATGCATTCGAAC CGAA GTTCAAATGTGTA        CTGCTTTGGTCACTC  48 240
CLC90_RS16215 NONE
CLC90_RS16210 3546879 .. 3546916 - -10.9  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTT GTTA AAGTCATCTTTAAGATA    TTCAGGTGATAATGT  83 59
CLC90_RS16205 3543669 .. 3543679 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 12
         rrf NONE
CLC90_RS16195 NONE
         rrf 3543174 .. 3543193 - -13.6   -5.4251   TTCAGACACAAAAAA            GGCTACCC GTTA GGGTAGCC             TTTTTTGTTTGTTTG 100 43
CLC90_RS16185 3541502 .. 3541524 -  -4.8  -3.31183   AGAAGCTAAAGTGAA           TGGCGGCC TCGATTC AGCCACCA           ATATAGAAAAGAAAT  53 40
CLC90_RS16180 NONE
        aceA 3538164 .. 3538187 - -14.6  -3.86202   TCCCATCACACGAAA          CAGAGCCTGC ATTA GCAGGCTCCG           GTCAACTCTCTCAAG 100 56
CLC90_RS16170 3536315 .. 3536343 - -14.5  -3.41229   AGATCGGCAGCAGAA        GGGGTTTCCGCGC CCA GCGCGGAGAGCCC        CGGAGTGTACACGCA 100 96
CLC90_RS16160 3531468 .. 3531496 -  -4.5  -4.21194   CGCGATGACGCAAAA       CAGTCTGCCGCC CAAGCC AGCGGC-GACAG        GTGCTTTAATCATTC  63 44
CLC90_RS16155 3530871 .. 3530892 - -10.1  -2.91888   AAACTCGTGAAAGTA           GGCACTGCC TGAT GGAAGTGCC            GGTTTTTTGACCCTG  73 80
CLC90_RS16125 NONE
CLC90_RS16120 NONE
CLC90_RS16115 3524381 .. 3524395 -  -5.6  -2.88667   CTCCATAAAAAGTGA               GACAGG CAC CCTGAC               ACTGTGATGCCCGAT  53 57
CLC90_RS16110 NONE
CLC90_RS16105 NONE
CLC90_RS16100 NONE
CLC90_RS16095 3521560 .. 3521570 -  -6.8  -2.84325   CCCCGTTAAACAGTA                 CCGA TTT TCGG                 TTACCTGCATTCAGC  57 243
CLC90_RS16085 NONE
CLC90_RS16080 NONE
CLC90_RS16075 NONE
CLC90_RS16070 NONE
CLC90_RS16065 3513066 .. 3513087 -  -5.1  -2.89421   TGAAGAATTAGTAGA           TGAGCACTA TCCT TAGCGCTCT            CAGTCAAGATTCATT  50 57
CLC90_RS16060 NONE
CLC90_RS16055 3509331 .. 3509342 -    -3  -2.93737   ATCTAGAAAGAGAAC                CTAA AGCG TTAG                 TCGCCCCGTTTTGGC  44 14
CLC90_RS16050 3508188 .. 3508204 -  -2.4  -3.21395   AGCCTTCCTATAAGA              TATAAT GAATT ATTATA              TTAATTCCGTCGGGA  43 187
CLC90_RS16045 3501624 .. 3501646 -    -4  -5.38054   GTTGATAAAGAAAAA           CCAGACGCGT ATC ACGCAGATGG           ACAGCCAGATTTTAT  81 69
CLC90_RS16005 3480525 .. 3480548 - -13.2   -5.1287   TTCAGACCGAAAAAA          GGCCCCTTAC ACCA GTAAGAGGCC           AATTATAATCATGAT 100 65
        psiE 3479773 .. 3479802 -  -4.9   -2.5007   GGAATGCAGCAATAT       CTCAACCCACAGA ATTA CCTGTGGGGCGAC        TTCGCGGCGGCGGCC  46 270
        malK NONE
CLC90_RS15970 3472868 .. 3472889 - -15.9  -5.13722   TTCATCAAAACAAAA           CAGCCGTCC CGAA GGACGGCTG            TGTCACTGCTGTTAC 100 37
        malM 3471789 .. 3471806 - -12.7  -5.33848   ATCACAATGAAAAAA             GGTGCGC CACG GCGCACC              AATCATCCAGCCATA 100 59
CLC90_RS15960 NONE
CLC90_RS15955 3469975 .. 3469989 - -11.4  -5.29782   CATAGCGACAAAAAA               GGCCAG ATT CTGGCC               TTTTTTATTGATCGC 100 68
CLC90_RS15945 3466884 .. 3466911 -  -6.4  -2.87132   CTGTTTGTTTATACA        GTTTAGCTGT GAGTATAT ACAGCCAAAC         TGCTCTTGGGAACCA  55 107
        lexA 3466098 .. 3466112 -  -6.4  -3.25823   TTTCCCGCATATTAA               TGCGTA TAC CACGCA               GCACCGGTAAGGAGC  59 165
        dusA 3464071 .. 3464085 -  -2.9  -2.75514   TAGATAATAATTAAT               CATTT GAATT AAATG               GGAAATATGATTTTT  42 83
        pspG 3463403 .. 3463424 - -10.2  -5.08601   TGACGCCAATAAAAA           TGGGTTCC GTTTCA GGAACCCA            TTTTTATAACGCTTT 100 361
        dnaB NONE
         alr 3459625 .. 3459648 -  -9.6   -5.4505   CGGGGCAATAAAAAA          GCGCGACATCA TAT TG-TGCCGCGC          CCTTTATTAATATAA 100 61
CLC90_RS15905 3458178 .. 3458199 - -10.9  -5.54885   AATATCAATAAAAAA           GGAGCGATA TTGC TATCGCCCC            TGATGCGTTTTAACA 100 51
CLC90_RS15900 3457447 .. 3457464 -  -4.8  -3.89822   CAGGCACGCCAGAAA             CCGTCGC CGAGT GCG-CGG             CGTCCCACACAGCGC  59 125
CLC90_RS15890 3453790 .. 3453807 -  -4.8  -5.15969   GCTGAATGTAAAAAA             CCCAGC TATTAC ACTGGG              TTTGATTGATTTCTA  80 58
CLC90_RS15885 3452813 .. 3452836 - -10.4  -2.52234   AGAAAGGGGACGAAT          GACGGAAAAA ATAA CTTTTCCGTC           GCCAATAACCCTCGG  73 86
CLC90_RS15880 3451033 .. 3451064 - -16.7  -3.85864   TCAGGATGATAATAA      GGCTAAGGAGAGG CGAACT CCCCTCCTTAGCC       TAGTGATTATCATAC 100 45
CLC90_RS15875 3449190 .. 3449211 - -13.7  -2.94045   TCACGGGAATAAGTA           GGCGGAGCC CGAT AGCTCCGCC            CGTCTAACCGGTTAT 100 40
CLC90_RS15865 NONE
CLC90_RS15860 NONE
CLC90_RS15855 3446056 .. 3446071 -  -8.2  -3.75051   GATCAAGGCAAAAGA              CCCGGC TATA ACCGGG               TTGAGATTAATAACC  75 242
CLC90_RS15845 3444120 .. 3444143 - -12.4  -4.56597   GGTGTTGTTTAAAAA          GGCGTACTCC ACAC GGAGAACGCC           TTTTTTATTATGAGT 100 203
        csrD 3431838 .. 3431858 -  -3.3  -5.01732   AAGCCCTTGAAAAAA            GACTAAAAA TCC CCTTCAGTC            GATGCATCGAACGGC  71 172
CLC90_RS15780 3430559 .. 3430607 -  -3.3  -5.18726   CCTCGACAACAAAAA GGAGGCACTAAATCTGATGA GGCAATACTT TCATCTGATCCAGC-CCTCC TTTTGTGGCTGACTA  75 41
        mreC NONE
        mreD NONE
CLC90_RS15765 NONE
CLC90_RS15760 NONE
CLC90_RS15755 NONE
CLC90_RS15750 NONE
        tldD 3420735 .. 3420761 - -13.8  -3.51329   TACCGCTAATGACAA         TGGCCTTCCC ACCGATG GGGAAGGCCA         GTAACGGTTAAGCCG 100 33
CLC90_RS15735 NONE
        aaeA 3418389 .. 3418400 -  -2.2  -2.93853   TTCCCTTAACCAAAC                TCAC GCAG GCGA                 TGTATGAGTTGGATC  42 4
        aaeB NONE
CLC90_RS15720 3414758 .. 3414771 -  -8.1  -3.62275   ATTGATTAGGTTAAA               GCGTC GGCT GACGC                TCATTAGCGCCAACC  70 52
CLC90_RS15715 NONE
CLC90_RS15710 3413845 .. 3413859 -  -2.8  -4.99043   TGCCCAGAAAGAAAA               GGCT GCCAATA AGCC               ACCGAAAGCATTCCG  71 128
        pmbA 3411763 .. 3411788 -  -9.7  -4.91511   ATTTGAGCATAAAAA         TGGCTAGGGAC AATT GCCACTAGCCA          TTTAAATCATTTGTG 100 90
        cybC 3411211 .. 3411237 -  -6.4  -3.91197   CGATAAATCAGTAAA         GGGTGGCAGCTC GAC GAGCTGTTCCCC         TTTTATTCGCTTGGA  67 51
CLC90_RS15685 3409518 .. 3409539 -  -6.5  -4.87626   TTTGAATACTAAAAA           TAGGCTGGC AAAC ACCAGCCAA            CGGTGAGAATTCATT  80 138
        treR 3404905 .. 3404918 -  -6.7  -3.09015   TCTACACTTATGGAA               TGGGA ACGT TCCCA                TGCTGTGTTGAAGAT  59 99
        treB 3403343 .. 3403369 -  -3.6  -4.62783   TATTCATTTGAAAAA         TTGCCCCGCCAA ACG TCAACAGGGCAT         CACGCTAATCAAACC  67 34
        treC 3401475 .. 3401503 -   -11  -3.21993   AGGTAGAAGAGTCAA       GCG-TCCGCGCCA ATAA TGGCGCGGAACGA        GCCGACAAGGACGTA  79 171
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB 3387514 .. 3387542 -  -7.4  -5.04868   TTAAACTAAAGAAAA       GCCCCTGCGTCGT GATT ACGT-ACAGGGGC        CAAAATACCGTGATG  89 64
CLC90_RS15565 NONE
        murA 3385750 .. 3385776 -  -9.5  -5.59534   AATTACAATAAAAAA        GCCAGCC-GGTT AAAG AACCTGACTGGC         TTTTTATTGGAGCGG 100 115
        zapE 3380949 .. 3380965 -  -3.8  -3.96148   TGCTGGCACTATAAA              GTTTTT GGGAA AAAAAC              TTTATTGTAACGTGG  58 208
CLC90_RS15530 NONE
CLC90_RS15525 3379931 .. 3379947 - -13.7  -5.64274   TCAGGCATAAAAAAA              CCCGGTG AAA CACCGGG              TTTTTAGCATTAATC 100 62
CLC90_RS15520 NONE
CLC90_RS15515 3378405 .. 3378428 -   -16  -4.14627   GCTCGACAGAAACAA          CCAGGGCGGC CTAA GCCGCCCTGA           AGAATAATACGCAAA 100 51
CLC90_RS15495 3369802 .. 3369812 -  -3.2  -3.68292   ACCGGGAATAGATAA                 GGCA AGT TACC                 CAGAAGTGTGGAAAA  51 144
        arcB 3367251 .. 3367263 -  -6.3  -3.37053   ACATATTTTAATGAA                TCTTG TAA CAAGA                GCGCTTACATTTGCT  59 167
        elbB NONE
CLC90_RS15475 3365643 .. 3365658 - -10.4  -3.73647   GTTACTCAGCAAGAA              GGGCAG TCCG CTGCCC               AGATAGCCAGTAAAG  79 163
        rsmI 3361039 .. 3361051 -  -3.3  -3.05816   CGACTGTCTAGTCAA                CTCCG CGG CGGAT                TATAGTCACATTGAG  44 124
        rnpB 3360629 .. 3360652 - -14.6  -5.28983   CCTAAAAGAGAAAAA          CCCTGTGCGG CAAG CCACACAGGG           TCATCATTTATCGAG 100 37
CLC90_RS15440 3360177 .. 3360190 -  -5.2   -4.0098   CGGGAACCCAAACAA               CCGC ACCACA GCGG                CTCACCTGCGGCGAT  64 286
CLC90_RS15430 3358149 .. 3358161 -  -3.3  -4.13767   CCGGCTATGGGAAAA                TGGGC GAT GCCTA                TGCAGGAACTCAACA  58 443
CLC90_RS15375 3349606 .. 3349630 -   -10  -4.36729   ACCAAGAATTTAAAA         GCGAGAG-GCC AGTT GGCACTCCCGC          TTGGCGTATTACAGC  93 34
CLC90_RS15370 NONE
CLC90_RS15365 3346450 .. 3346481 -   -16  -3.10939   AAGTGTAAAACGACA      CGCTTACCGCCAGA AATT TCTGGCAGTAAGCA       ACCTGTAAAAATGAA 100 75
CLC90_RS15360 3345457 .. 3345471 - -11.4  -3.17051   GTGCCACCATTAATA               TGGCCG GTG CGGCCA               TTACTATTACCGTAC  79 408
        rlmG 3336913 .. 3336938 - -10.5  -4.41616   AGGTCGCGAAATAAA         CAGAACCCCACC CAA AGTGGGGTTC-G         TCAACGGCAGGGGAG 100 66
CLC90_RS15320 NONE
CLC90_RS15315 3329451 .. 3329465 -  -3.4  -2.62983   TGCAGTTGGAGATCA               CCCAGC GCA GCAAGG               GAACCGCTGTTGGCA  42 376
CLC90_RS15305 3320138 .. 3320155 - -14.1  -5.50313   TATAAAAGCAAAAAA             CCCGGCC AACT GGCCGGG              GTTTCTTAATCAGTA 100 52
CLC90_RS15295 NONE
CLC90_RS15290 3318140 .. 3318150 -  -2.6  -2.66452   ATTTTTATAATCAAC                 TAAT TTC ATTA                 CTTCACCTTTAAATC  41 23
CLC90_RS15285 3317809 .. 3317832 - -12.4  -4.19735   GGGCTTAAAAGCAAA          GATCCCGGCC TGTT GGCCGGGATT           TGTATTATTCGATGG 100 30
CLC90_RS15270 NONE
CLC90_RS15265 NONE
CLC90_RS15260 3313807 .. 3313820 -  -2.4  -3.63744   CTGTTCTCGAAAAGA               GTAC GGGAAT GTAC                AGGAGAATGAATATT  49 96
CLC90_RS15255 3312259 .. 3312279 -  -5.4  -2.80016   CGTGATCATGAACCA           GTGGCGACA TTTA TGCCGCC-C            AAAAAAGCTGTCGAC  50 231
        tsaD 3301024 .. 3301046 -  -2.6  -4.09628   TATTCGAAATAACAA           TGATCGCAGC CCT GCTCAGACCA           CAAAAACCGAATGAC  57 262
CLC90_RS15185 3299753 .. 3299777 -  -8.6  -5.77632   AAAACCACAAAAAAA          CGGCAATGTT GCAGA AACAATGCCG          TTTAAATTCAGTTAA 100 121
CLC90_RS15180 3298839 .. 3298856 -  -9.1  -5.38958   ACGCAGAAACAAAAA             GCCCTGC AAAT ACAGGGC              CATTTAGGTGAGTCA 100 56
CLC90_RS15165 3294934 .. 3294953 -  -3.4   -4.9725   ATTCCTATACAAAAA            CAGCCGGC AAAA GCAGGCTC             AGACGGCTGACAAAC  71 206
CLC90_RS15160 3292033 .. 3292049 - -10.8  -5.14645   ACAAGGCAAGAAAAA              GGGGCG ATTTA CGCCCC              AGAAACCCATATTAT 100 55
        hldE 3290306 .. 3290336 -  -9.8  -3.74077   GGCCAGATACTCAAA       CAGGTAAACTGGCA AAG CGTCAGTTTACCTA       CGTCCTTATCATAAC  84 54
        ribB 3288491 .. 3288527 -  -2.4   -5.9218   TACACAATAAAAAAA   CCGGG--CTACCTTCCAT TAA ACGGAAAATAAAACCCGG   TGAGTTCAGTCAGTT  90 77
        ygiD 3287490 .. 3287509 -  -7.8  -3.27923   CCGTAATATGATCAA            GGGAAGGC GAAT GTCTTCCC             TTTTTACATCAATAA  66 50
CLC90_RS15115 NONE
CLC90_RS15110 NONE
CLC90_RS15105 NONE
        yqiA NONE
        parE 3278988 .. 3279017 - -10.8  -3.56837   CGCCAAAGATGACAA      CGCCCGGTTCTGCA AAGG TGCAG--CCGGGCG       CGGTTTGGCAGCGAG  83 59
CLC90_RS15090 3277885 .. 3277897 -  -3.3   -2.7898   GCCAACATTTAACGA                CGCAG TTT CTTCG                ATAATCGCTGGCCAT  43 120
        parC 3274456 .. 3274468 -  -7.7   -2.6027   TGAAAACCTAATCGA                CGCTA GTA TAGCG                GCTGCGATGCAAAAC  60 210
CLC90_RS15075 3273585 .. 3273623 -  -3.1  -4.67011   AACCGTATGCAAAAA   TTTTGCCCACCGACACC ACGGG GATACAGGAGAGCAAAA   CACTAACGACCAGAG  65 98
        ftsP 3272073 .. 3272096 - -13.2  -3.50553   TAAGAGGATTAAATA          CAGGTTCGAC GAAG GCCGAACCTG           ATTAGAGGCAAGTAT 100 40
CLC90_RS15065 3269563 .. 3269591 -  -5.1  -3.29874   TGAAAAACAAAGAAT        TGGGCGATCCCGC ACC GCTGGCTCATCCA        TCACCTCAGTGATGG  55 107
CLC90_RS15050 3265820 .. 3265876 -  -4.4  -3.62775   AGTATCGCCGAATAA TACGACCAGACGCACCGATCATGTCGC ATTC GCGCGGAGATCGGTGTAT-TGGTCATA CTGGGTTGCTACGTA  54 21
        exbB NONE
        exbD 3261801 .. 3261836 -  -9.8  -2.57721   TAACTGATGAAGGGA    TGACTGGCGCGGCAA TTGTATT TTGTCGCGCCAG-CA    AGGTTATTATTGTGC  71 32
CLC90_RS14995 3256023 .. 3256033 -  -2.6  -5.77856   AACAAAGCAAAAAAA                 TAAA CAC TTTA                 ATGAAAGTTTTCCTG  90 292
CLC90_RS14935 NONE
CLC90_RS14930 3242834 .. 3242846 -  -6.2  -2.86151   GCAAGTATCAAGAAT                CCGG TGATT CCGG                TATCTGTCCGTCGAT  55 68
CLC90_RS14925 3235599 .. 3235633 -  -8.6  -3.24423   CTCAAGAACAGTTAA     TTATCTGAGGCCGATA AAT CACCGGCCTCAATCAA     TCGGTTTAACCTCCT  69 31
        entS 3230186 .. 3230209 - -13.2  -3.55444   TGCCCATGGCCTAAA          CGATCCGTGC ATTA ACACGGATCG           TTACCCACATCGCGG 100 49
CLC90_RS14890 NONE
CLC90_RS14885 NONE
CLC90_RS14880 NONE
        dhbA 3224441 .. 3224457 -  -6.5  -3.19463   CGGATCATCCATCAA              GCTGCCA GCG TGGCACC              ACCATCAACAACGAT  57 5
CLC90_RS14870 3222534 .. 3222548 -  -4.2  -5.14985   TTAAACATATAAAAA               TACCCG TAC CGAGCA               GAATCTATTTTTACA  78 409
        tdcB 3220906 .. 3220919 -  -2.5  -3.13899   AATTCCTTATTAAGA               TATTT TACG AAATA                CTGCCTAATCCCGTT  44 16
        tdcC NONE
CLC90_RS14855 NONE
        pflB 3215903 .. 3215924 - -10.1  -4.55887   GTTGAAAAATAGAAA           GCCCTCCGT CAAA AAGGAGGGC            TTGAGGGCAATATTA 100 38
        pfkB 3214613 .. 3214626 -  -3.1  -4.59109   CACATGGTGGAAAAA               CACCT TATG AAGTG                TTAAAAACTAAATTG  65 170
CLC90_RS14815 3208691 .. 3208716 - -12.7  -5.47159   TGGCAATATAAAAAA         TGGCAC-AGCTC ATC GAGCTTGTGCCA         TTTTTTTTGCACCGC 100 487
        trmB NONE
CLC90_RS14785 3204836 .. 3204861 - -12.7  -5.06414   TTTCCCTAATAAAAA         TAAAGGCACCA ATAA CGGTGCCTTTA          TTATCAAACAGTGGT 100 54
CLC90_RS14780 3203841 .. 3203864 -  -2.3  -2.83164   CCACTCATTATGACA          CTGCCAGAG TTTTAG CGCCGACAG           AAGTAGACTGATCCT  41 39
CLC90_RS14775 3202731 .. 3202745 -  -4.9  -4.15044   CCGGCCTGGAAGAAA               GCGAG ATCCG CCCGC               AACTGGATCAAGCCA  64 361
CLC90_RS14740 3197234 .. 3197247 -  -3.1  -2.76087   AACAGATTCCCAAAC               CTTAG TTAG CCAAG                TCCACGCATTCTGTA  43 279
CLC90_RS14695 NONE
CLC90_RS14690 NONE
CLC90_RS14685 3188952 .. 3188965 -  -6.7  -3.01712   CTTTGGTCGCGAACA               CTTCC CTTG GGAAG                CCACTGACAAAGCTG  55 276
        speA 3184853 .. 3184878 -  -9.7  -4.59846   AGGAGATAAAAATAA         CAAGGGCAAAC CGAA GTCTGCCCTAG          GGTAACAACCGATAA 100 53
CLC90_RS14670 3184113 .. 3184124 -  -4.4  -3.54027   TCACTAAAAACAAAT                GAAG GCAA CTTC                 CATGACGCTACAGCA  52 317
         tkt 3181957 .. 3181972 -  -8.2  -6.08563   AACAGACAAAAAAAA              GGCCGC AGAA GCGACC               TTTTAACATCGATAT 100 85
CLC90_RS14660 NONE
CLC90_RS14655 3179414 .. 3179433 - -10.6  -3.81539   AGCGAAATAGCGAAA            CGGGCGGC TTTC GCCCCCCG             TCATCTAAATTACTG  86 35
CLC90_RS14650 3178199 .. 3178214 -  -8.2  -5.75538   GCTAAAAAAGAAAAA              GGCCCC AACA GGGACC               TTTAAGCGGATGACA 100 52
        mscS 3177061 .. 3177079 -   -16   -3.6608   AGTAGCCGAGTCAAA             GCGGGTCG TTG CGACCCGC             GTAAACTGGATTAAG 100 54
        argO 3176138 .. 3176151 -  -2.4  -4.19704   TAATCTCACTCAAAA               GCAA CTTACT TTGC                AGTTAATTACGCTTA  55 146
CLC90_RS14635 3175283 .. 3175311 -   -14  -2.64803   CCATGCGGAAAGTGA       CTGACGCCC-TGT TATC ACATGGGCGTCAG        GTACTACGGCAGGAT  95 54
        rpiA 3173523 .. 3173548 - -11.9  -3.28552   AAAGGCAAAAATAAT         CGGGATAACGT CGAA ACGCCATCCCG          GTGACCGTATTAGCG  89 35
CLC90_RS14620 3171970 .. 3172015 -  -5.3   -3.9392   GGTTAGGCCAAATAA TCGTGCAGATTTCCCGGAGTC AGAA GACACCGGGAAAATCGGACTA ATACAGCAGACGGGC  63 23
CLC90_RS14600 3169882 .. 3169917 -  -5.4  -4.92314   ATCAATCTAGAAAAA    TATCAGCCTGTCGCAGT AAA AC-ACGCCAGGCCGATG    GCGGGTTGTATAACC  78 66
CLC90_RS14595 NONE
CLC90_RS14590 3167288 .. 3167315 -    -7   -4.4267   CGTGAAAACTGAAAA        GAGCCGGTCCACC ACG GATGGAA-GGCTC        TAAATGCACGCTTAA  76 37
CLC90_RS14585 3165911 .. 3165926 -    -4  -4.28597   ATAATTAACAAATAA              TCAGTA AAGT TACCGA               TGTTATATAACCAAA  63 140
        gcvT 3164454 .. 3164471 -  -4.1  -3.31232   GTTTTTAGATAAAAT             TACAGCG CGAC CGCTTTA              CCCGCTCGCACAAAA  51 7
        gcvH 3163984 .. 3164012 - -14.6  -5.58454   GCGATAGCAAAAAAA        CGCCCCGATTCA GTGAA TGAAACGGGGCG        GAAGTCTTATTCGTC 100 32
CLC90_RS14570 3161004 .. 3161021 - -10.5  -4.68593   CTTACCACGTAAAAA             GGGCCAC TTTC GCGGCCC              TCTATACAGATTTCG 100 49
CLC90_RS14560 3159561 .. 3159586 -   -12  -2.82834   CAGGTCATCATGATA         TTTAGAGGCC GGTTCT GGCCTCTAAA          TATCCGATAATTTGC  83 118
        sdhE 3157991 .. 3158008 -  -3.3  -2.64107   GAAACCCGCAGATCA             CATCGCC ACTG GGCCACG              GGCTTTATTTCGTGT  42 5
CLC90_RS14545 3157453 .. 3157480 -  -5.7  -3.55444   TCGCTATGCTGGAAA       GCCGTTG-T-GCA ATGC TGCCAGCAACGGC        TCGCCACGCTCAAAC  59 130
        xerD NONE
        dsbC NONE
        recJ 3153358 .. 3153391 -  -4.7  -2.83012   AATTGTATTATTATA     TTTATGGTGCTATATC GGC GA-ATAGCACCATTAG     CCGTAGCATTTAACG  49 58
        prfB NONE
        lysS 3150591 .. 3150606 -  -8.2   -5.1287   TTTAGACGTAAAAAA              GGGCAC CGAA GCGCCC               TCTTATCAATGTCGT 100 46
CLC90_RS14510 3150122 .. 3150136 -  -4.2  -3.05596   GATGGTGGTATTTAA               CGATGG GTG CAATCG               CTTCCAGTTTTAATT  47 279
CLC90_RS14505 NONE
CLC90_RS14500 NONE
CLC90_RS14495 NONE
CLC90_RS14490 3146375 .. 3146407 -  -2.6  -3.75461   TAAATCGGTAGGAAA      GCCCCGACCTGC TGAATACTG GTACATCGGGGC      GATAACAATGCGGTT  52 59
CLC90_RS14485 3144423 .. 3144466 -  -2.7   -3.0161   ACTGATAATAAGAAG GTGGTCATGCTT-ACTTT AATTTTTAA AAAGTCAAACATCACCAC ACCCTTATGAATATT  43 72
CLC90_RS14480 NONE
        gspD NONE
        gspE NONE
CLC90_RS14465 NONE
        gspG NONE
CLC90_RS14455 NONE
        gspI NONE
        gspJ NONE
CLC90_RS14440 NONE
CLC90_RS14435 NONE
CLC90_RS14430 3134264 .. 3134274 -    -4  -4.20118   AATAGTCAAAAAATA                 TACT TAA AGTA                 ATGAGTGAGGAGTAA  61 286
CLC90_RS14425 NONE
CLC90_RS14420 3132289 .. 3132300 -  -5.8   -4.1523   GGGAAGTAGAAATAA                TCCC TGCA GGGA                 AATATTTAGGTGACC  69 251
CLC90_RS14405 3129502 .. 3129514 -  -9.1  -3.30338   ATAATCTGGGCACAA                CCAGC TAT GCTGG                CAACCAAAGACAGCA  71 272
CLC90_RS14395 3127075 .. 3127085 -    -4   -4.2558   TATTCTGTATTAAAA                 CATT TCC AATG                 CGACCAACTCTTCAA  63 9
CLC90_RS14385 NONE
        lplT 3121786 .. 3121806 -  -9.7  -4.19238   TCTCCAACGCCAAAA            GGCCGTTGA TAT TAAACGGCC            TTTTGGTTAAAAAAT  88 48
CLC90_RS14360 NONE
CLC90_RS14355 3117754 .. 3117775 -  -2.9  -3.24166   ATTGAATTAACTTAA           CCTCTTTTC CGGC GATAAGCGG            GTGGTGTCCGAGGCA  46 0
        ptsP 3115456 .. 3115475 -  -7.8  -3.54488   GTTCTGTAAACAATA            GCGACGAA TATT TCCGCCGC             CCGATGACTATTAAG  68 41
CLC90_RS14345 NONE
CLC90_RS14340 3113530 .. 3113549 - -10.7  -5.58522   TACAGAAAACAAAAA            CCGGAGC GTTTAG GCTCCGG             TTTGGGGTTAATAAC 100 145
CLC90_RS14335 NONE
CLC90_RS14330 NONE
CLC90_RS14325 NONE
CLC90_RS14320 3111272 .. 3111302 -  -9.8  -2.63257   AGCGCATATAATCTA       CTGGTTAATCAGGA GAA TCCTGATTAACCCC       TTTTAGCACGCAGTA  71 101
CLC90_RS14315 3107844 .. 3107855 -    -3  -3.33261   CCTTAACCCTCAGAA                TTTG ATAC CAAA                 TAATTTATATTGCTC  47 41
CLC90_RS14310 NONE
CLC90_RS14305 NONE
CLC90_RS14300 3099364 .. 3099377 -  -8.1   -2.8806   AAATCCGTCCATATA               GGCTC GAGC GAGCC                GTCCGTGGCACCGAT  61 157
CLC90_RS14290 3096316 .. 3096329 -  -8.1  -3.08679   CTTTCTTACTCAAGA               CACCC ATAT GGGTG                TTTTTTTGTTTCTGG  63 134
CLC90_RS14270 3094494 .. 3094509 - -11.8  -4.71186   ATTACGAATACAAAA              GCGGCC CGGC GGCCGC               TTGGAGTCATCTGAC 100 62
        tcdA 3093472 .. 3093488 -  -2.2  -4.89009   ATATCGAAGGAAAAA              CAGCGA AAGAA TTGCTG              GCGATCGATCCTTTA  70 156
CLC90_RS14250 3091333 .. 3091345 -  -7.7  -3.00022   GGTATGCCAGACATA                GTAGC TAA GCTAC                TGTTTTTTCACTTCC  62 216
        gcvA 3090145 .. 3090163 -  -2.4  -3.07135   TTTTATAAATAATTA             CTGTTGAA AAA TTCAGCAA             CTTAGCATTTTTCAC  43 43
CLC90_RS14240 NONE
        rlmM 3088163 .. 3088180 -  -6.3  -4.32034   TTAGCAGTAGCAAAA             TACCCGGC GTT GCCGG-TA             TTGGGGCAAAAACGG  74 469
CLC90_RS14215 3084078 .. 3084088 -    -4  -4.10161   AGATAAAAAAATGAA                 TGTT TAT AACA                 AAGTGATTTTATTGA  61 138
CLC90_RS14210 NONE
        truC NONE
CLC90_RS14200 3081855 .. 3081880 -  -8.4  -5.15634   TATCGGATCAAAAAA         GTGGCG-ACAA GAATA TTGTTCGCCAC         TTTTTTATTTTCACT 100 36
        rpsB 3075695 .. 3075715 -   -14  -4.04174   CTGTAGATAAGCAAA            GGGGGCCT ATAAA AGGCCCCC            TAACCAACATATTTC 100 81
CLC90_RS14170 3074750 .. 3074773 - -14.6  -3.74693   CTTGATTGGATGAAA          TGGAACCGCC TGTT GGCGGCTCCA           TTTTTAAGCATTAAG 100 36
CLC90_RS14165 3073869 .. 3073900 -  -6.6  -3.53761   CAATTGCTGGTTAAA      GGCG-ACTCAGCGCA CAT TACGCCAAGTTCACC      CTGATTAGAACGGCG  63 42
CLC90_RS14160 3073181 .. 3073206 - -11.1  -5.48303   ATAACGGTAAAAAAA         CAAAGCGCCGC CTAA GCGACGCCCTG          GAACATCTGACCAAA 100 43
CLC90_RS14155 3071637 .. 3071656 -  -6.4  -5.68039   AAACGCACAAAAAAA            GCCGTG TACTAAAT CACGGC             TTCTTATATGACAGC 100 161
CLC90_RS14150 NONE
CLC90_RS14145 NONE
        rseP 3068556 .. 3068579 -  -2.3  -2.52464   GTTCTTCCTAACCTA          TCCCCAGCC GTTAAA AGCGGGAGA           AATCATTGAAAAGTG  39 12
        bamA NONE
CLC90_RS14130 NONE
        lpxD 3064323 .. 3064363 -  -5.5  -2.93901   ATGCTATCAACGACA CGGCCTGC-T-TTGACCCC AAAAG GAGATCATCATGCAGGCCG CAAATTAGGAACTCT  52 105
        fabZ NONE
CLC90_RS14115 NONE
CLC90_RS14110 NONE
CLC90_RS14105 3061181 .. 3061208 -  -6.2  -2.75382   TAGTGGATTGAATCA        CGCCCACAGGACA GGG CGTCC-GAGGGCA        TCATAGCTAAGTGTG  55 59
CLC90_RS14100 NONE
        accA 3056649 .. 3056673 - -16.5   -5.4505   TTTGCCAATAAAAAA          CCCGGAGCCAA ATT TTGACTCCGGG          TTTTTAACTGAAAGA 100 46
CLC90_RS14080 3054775 .. 3054802 -  -2.7  -3.31269   TCCATATGATATCAA        TCCGCTTAAAT ATCGCG ACCTCAGCGGA         TATTGGCGACCACTT  46 18
CLC90_RS14075 NONE
        tilS 3052962 .. 3052980 -  -2.4  -4.26076   TCATTGCCACCAAAA             GTACTGAT TTC ATCACCAC             TCCTCAATATCACTC  58 45
CLC90_RS14065 3052613 .. 3052636 -  -4.5  -5.31275   TTCCAGCATAAAAAA          GGGCCGC AATTTAAAAA ACGGCCC           ATTTTTATTGGCTCC  82 49
CLC90_RS14050 NONE
CLC90_RS14045 NONE
        nlpE 3050130 .. 3050146 - -10.9  -5.64274   TCAGCGACAAAAAAA              GCCCTAT TAA ATAGGGC              TTTTTATTGCATCGT 100 83
CLC90_RS14005 3043350 .. 3043379 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TATGCATTCGAAC CGAA GTTCAAATGTGTA        CTGCTTTGGTCACTC  48 367
CLC90_RS14000 NONE
CLC90_RS13995 3041463 .. 3041500 - -10.9  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTT GTTA AAGTCATCTTTAAGATA    TTCAGGTGATAATGT  83 59
CLC90_RS13990 3038253 .. 3038263 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 12
         rrf 3038003 .. 3038023 - -10.4  -4.84527   CGCACATAGCAAAAA            CCCCACGC TTTTG GCATGGGG            TTTCGGCTTGATTTG 100 43
CLC90_RS13955 3029876 .. 3029912 - -19.7  -4.40804   CACCATCGGATAAAA    TAAAAGGGACGCTGACA TAT CATCAGCGTCCCTTTTA    TATCGAACAAAGGTT 100 42
         asr 3015173 .. 3015192 - -13.6  -5.58454   GTCACATTAAAAAAA            CACCCGGT AAAA ACCGGGTG             TTGAGGTTTGGCAAA 100 69
CLC90_RS13880 3014218 .. 3014268 - -10.5  -3.47762   AACATTTATTAAAGA TGCGACCGATG-AGAATATCGCAC AATG GCGCAATATTCTGCTACGGGCGCA CATTCCGCCGACATT  77 235
CLC90_RS13865 3012786 .. 3012801 -  -8.2  -5.69262   TGATAAAAATAAAAA              CCCCGC CGTA GCGAGG               TTTTATGGTCGTTGG 100 133
         mqo 3010370 .. 3010391 - -14.5  -4.62984   GCAGCACATATAAAA           GCCGGAGAA ACAT TTCTCCGGC            TCGTTACTCAGATAT 100 55
CLC90_RS13835 NONE
CLC90_RS13830 NONE
CLC90_RS13825 NONE
CLC90_RS13820 NONE
CLC90_RS13815 NONE
CLC90_RS13810 2996741 .. 2996778 -  -7.8  -2.80195   AGTCATTATCAATTA   CCTCAATTGTCTGTCA TTAAAT TAACAGGCTATTGAGG    TGTCCGGTATTACTG  61 69
CLC90_RS13745 2974847 .. 2974859 -  -4.8   -3.1085   CGAAGTGATCGAAGA                GCTG CCACT CAGC                GCATAACAGGCACAT  51 194
CLC90_RS13740 2974176 .. 2974189 -  -3.1    -5.252   GATGGTGATAAAAAA               TATCC AGTC GGACA                GATGGATGGGCAAAC  77 505
CLC90_RS13605 NONE
CLC90_RS13600 2949184 .. 2949198 -  -5.6  -2.52464   CTTTTCGCCAATCGA               CAGGGT ATG ACCCAG               CAACTCATCCAAATC  52 437
CLC90_RS13570 NONE
CLC90_RS13565 2944506 .. 2944526 -  -6.8  -4.83615   GACGGTTGATAAAAA            TATGGCGC GTAAT GCGCCTTA            TTTTTTGGTTTTTTC  82 23
        grpE 2940560 .. 2940576 -  -9.4   -5.4492   GACACAGAGAAAAAA              GGCACC ATAAA GGTGCC              TTCAGACTCGCTGGA 100 46
        grcA 2939076 .. 2939093 -  -9.1  -4.91573   AAAAGACAGTAAAAA             GGGGAAC CGAA GCTCCCC              TTGACGTGATTAACG 100 57
CLC90_RS13530 NONE
CLC90_RS13525 2936940 .. 2936964 -  -7.2  -4.67353   GCACTCATGCAAAAA         GCCGC-TGAAT TCAC ACTCAAGCGGC          TTTTTTTATGGTGAA  81 244
CLC90_RS13515 2934669 .. 2934715 - -13.9  -2.55074   TGCAACCGTAATTTA TCCCTATCACTGCAAGGGCACA CACT TG-GCCCTTGTAGTGATAAGGT CAGTAATGAAGATAA  93 25
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 2930064 .. 2930083 -  -2.8  -2.77182   TTTTATATTCAATTA            GCTATTCA CATC TGATCAGC             ACTGATTTGTTTATT  42 110
CLC90_RS13485 NONE
CLC90_RS13480 2926766 .. 2926789 -  -3.8  -3.97139   GAACCGCAATAATAA          CGTCAATAAC GTTG GCTATCGTCG           AATTAGTGAATGCCA  58 28
CLC90_RS13475 NONE
CLC90_RS13470 NONE
        recO 2924143 .. 2924153 -    -4  -3.23219   AATAGCCCTAGAATA                 GATT AAA AATC                 AGTGAATTCAGGAAG  49 42
CLC90_RS13460 NONE
CLC90_RS13455 2922875 .. 2922892 -  -3.3  -4.80417   GATAAAAACAATAAA             GAGCGGA TCAA TACGCCC              GCCCGATCGCCAGTA  68 59
        murQ NONE
CLC90_RS13435 NONE
        yfhb 2918296 .. 2918308 -  -3.3  -3.37344   CCGCGAGCGAATTAA                GCCGG CAA CCAAC                ACTGCGGTGGCGTTC  47 56
        tadA 2917541 .. 2917557 - -10.1  -5.59879   GATAAAGAGAAAAAA              GCCGCAC AAC ATGCGGC              GATTGAATCTGAATT 100 104
CLC90_RS13415 2911969 .. 2911984 - -11.8  -4.27465   GATAATCCAAAATAA              GGGGGC ATCA GCCCCC               TCTATCGGTTAACCC 100 34
CLC90_RS13405 NONE
        qseG NONE
        glrR NONE
CLC90_RS13390 NONE
CLC90_RS13385 2904418 .. 2904444 -  -9.5  -5.22006   TCAGGATAAGAAAAA        GCCCGTTTCATC TTTT GACGA-ACGGGC         TTTTTAGTCGGCAAC 100 63
CLC90_RS13345 2895998 .. 2896014 -  -6.5  -5.71712   GTCGACATAAAAAAA              CCCACGT TAA ATGTGGG              TTCTTGTGACATCAA 100 57
CLC90_RS13340 2894436 .. 2894459 -  -3.8  -3.42699   ACTGACCCAGCAGAA          TCGGCGTC TGGAAAGT GACGTCGA           GCGACAACTGCGGGA  50 236
CLC90_RS13330 NONE
CLC90_RS13325 2891590 .. 2891609 -  -7.1  -2.62616   TTATGGCTGAGATCA            GCGTCCA AATGGA CGGACGC             CGCCCATCATGGCTG  58 3
        trmJ 2889792 .. 2889816 - -13.1  -2.89881   TATTTAGGTCATAGA          CAGATATATCA ATA TGATATATCTG          TCTATTCTTTATCTT  91 27
        iscR NONE
CLC90_RS13305 NONE
        iscU 2887427 .. 2887447 -  -9.7  -3.33261   CCTCAACTCTGAGAA            CCCACCTGA AGC TCAGGCAGG            TTATTTATACTGATT  76 46
        iscA 2887075 .. 2887087 -  -3.3  -5.28683   ATCAAGAGGAAAAAA                CGCCC GTT AGACG                TTAAAACTCTCGCCA  79 19
        hscB 2886339 .. 2886354 -  -3.2  -2.79718   GAATTTTTAAAAGAT              GCGTTT GGCC AATCGC               TATCATTAGCATTCT  43 83
        hscA NONE
         fdx NONE
        iscX 2883705 .. 2883727 - -13.4  -4.85653   TAGATAGAAAAGAAA           CGGGGCCGCT ATC AGCGACCCCA           GAGATATTTACTCGA 100 33
        pepB 2882182 .. 2882201 -   -15  -4.07306   ATAGCGAACGATAAA            GGGGCACC TACA GGTGCCCC             AGAATAGGCGAGAAT 100 91
        sseB 2881213 .. 2881242 - -10.9  -4.33997   CATTAAAAATAAGAA       TAGGACGGAAACAG TAG CCGTTTCCGTC-TA       TAACGCAGCTTATGC 100 35
CLC90_RS13260 2875996 .. 2876006 -  -6.8  -3.06711   TATTCATAAAGGATA                 GAGG TGG CCTC                 TTGATCACTGAAAAC  58 65
CLC90_RS13255 2873635 .. 2873646 -  -4.4  -3.40403   CTTTTTTCATTACAA                CAAC TCTA GTTG                 TACATTATTTTAATA  51 30
CLC90_RS13250 2870905 .. 2870944 -  -2.2  -3.53343   AATGGGTTCGCTAAA  TGAAGCTACTGCG-CAG TGAGATC CCGCCACACCAGCTTCA  TCTAATCAAAGGCTA  47 65
CLC90_RS13245 2870093 .. 2870121 - -12.4  -3.37303   GAATAAATAATGGAA       CGCCCCGG-GGAG CAGG CTCATCCGGGGCG        CGGCATTGTACAAAT  95 137
        rlmN 2868782 .. 2868797 -  -7.6  -3.10255   ATAACAGTCAGTTAA              GACGAT TTTT ATCGTC               CTGTAAGGTTCAGAC  63 35
        pilW NONE
        rodZ NONE
CLC90_RS13225 2865722 .. 2865736 - -12.8  -4.27117   TGGGCACAATATAAA               GCGGGC CTC GCCCGC               TTGCTCAATACCAGT 100 55
CLC90_RS13220 NONE
CLC90_RS13215 NONE
        bamB 2862404 .. 2862438 -   -18    -3.224   GAAGTTTTTAGAATA     CGAAACGGCCCCTGAA CTA TTCAGGAGCCGTTTGG     GGACTCATATCAAGA 100 104
         der 2860794 .. 2860826 - -14.1  -3.87075   ACCATCCGCCAGAAA      TGCGAAGGGCGCGGA ATA TCCGCGCCCCTCTAA      CTGACTTTCTTTATT 100 36
CLC90_RS13200 2860229 .. 2860240 -  -3.6  -4.26188   GCGACACATTGAAAA                CCCG CTTG CAGG                 ACGGTTGGGTAGAAA  60 169
        guaB 2857132 .. 2857158 -  -9.5  -2.95933   AAAAAAGAAAACTCA         GTCATCCGGTA GTCGA TACCCGATGAC         CTGCTAGTCAATTCT  71 172
CLC90_RS13185 2855449 .. 2855469 - -12.7  -6.25578   ATTAAATAAAAAAAA            GCCTTCAAA TAA TTTGAAGGC            CTGATGCAGTAACTA 100 65
CLC90_RS13180 NONE
CLC90_RS13175 2852598 .. 2852610 -  -3.3  -4.30995   TTCTCTACAAAAGAA                CGCGG GTA CCACA                CAATAATTATCCATA  61 283
        thiD 2851310 .. 2851339 -  -9.3  -3.06815   ATGTGGTTGAAGATA       TGCAAGGTGAGCG CCGT CTGTCACCTTGCA        TCAGGCCGCGTAAGG  66 164
CLC90_RS13160 2849858 .. 2849874 -  -9.4  -3.66356   ATCTTTAACGTGAAA              TGGCGC TTTAT GCGCCA              TCAGGTTAAAGATCA  78 83
CLC90_RS13060 NONE
        pstA NONE
        pstB 2815423 .. 2815440 -  -7.7  -3.01712   CTGTCTGGCGGAATA             GGCACTA GCCA TAGCGCC              CGGTAATATAATCCT  62 12
CLC90_RS13030 2811776 .. 2811793 - -11.3  -5.90981   GCAGAGCAAAAAAAA             GCCGACT TCTT AGTCGGC              TATCAACATCATTTA 100 38
CLC90_RS13025 2810288 .. 2810302 -    -5  -3.15592   AACGGGCAGGAAAAC               CGGTAA AGC TTACCA               CAAAAATCAAAAGCT  51 156
CLC90_RS13020 2809458 .. 2809474 -  -9.3  -3.61178   GTTATTCAGGGGAAA              GCGCGGC TTG GCCGCCC              ACCAGAGCAGGTTCT  71 107
CLC90_RS13005 2806159 .. 2806174 - -10.4  -4.81083   TTTAATCAGCAAAAA              GAGCGC CAAA GCGCTC               TTTTTTTATGGGTGG 100 89
CLC90_RS12990 NONE
        bamC 2802965 .. 2802978 -  -9.5  -4.49311   AGCACCATGACAAAA               GGGGC CGAA GCCCC                TTTATTTAGTTTGCG  95 31
CLC90_RS12980 2801765 .. 2801787 -  -5.5  -5.27709   TGATAAAAAAACAAA          TGCCGGTCGC AAAA GCC-CCGGCA           AGAATCGAAAGATTA  84 358
CLC90_RS12975 NONE
CLC90_RS12970 NONE
CLC90_RS12965 2798261 .. 2798291 -  -9.1  -4.34402   CTTCGCATATCAAAA      GGGCAAAGAC-CGA GTTA TCGCACCTTTGCCC       TGCTTTGTTATCGGT  86 43
CLC90_RS12940 2794938 .. 2794959 - -13.1  -2.72461   TAACCTGGGTGAAAC           CAAGGATGC AGTG GCATCCTTG            CTATTATTACTGGCA  81 118
CLC90_RS12925 2790251 .. 2790266 - -11.8   -3.2794   CGTCACTGAGATTAA              CCCCGG AAAA CCGGGG               CTACTCAATGGCCGC  89 26
        napF NONE
        napD NONE
        napA 2785621 .. 2785637 -  -2.9  -2.82516   GCCCGCAGTATCAGA              GCCTGCG GGC CACAAAC              CAGCAATCAGGGTTA  42 38
CLC90_RS12900 2785118 .. 2785130 -  -4.7  -3.55444   CGGTTATTTGCCAAA                GCCAG GAG CAGGC                TGGAAGGTATTTTCC  55 1
        napC 2784436 .. 2784463 -   -12  -5.63517   TTTGCAAATAAAAAA        CACCCTGCCAGC CTAC GCTCACAGGGTG         TTTGCAAATAAATTA 100 57
        nudK NONE
CLC90_RS12885 2781084 .. 2781107 -  -9.6  -5.17353   ATATTGATCAAAAAA          GCCTCTGTCC CACG GAACAAAGGC           TCAGACGGCTGACAA 100 249
CLC90_RS12870 2778820 .. 2778858 -  -2.5  -4.03978   AATTTTTGAGATAAA   GGCCAAAATCACC TTATCTATTGCTC GGTCATTTCGGCC   AGTGGTGCTATTGAA  54 91
CLC90_RS12860 2777329 .. 2777345 -  -5.1  -2.80338   ACAACCCATCAAGCA              GGTTGAA AAT TTCATCC              CCTTTTTAAATGAGT  49 187
CLC90_RS12845 NONE
CLC90_RS12840 NONE
CLC90_RS12835 2774184 .. 2774204 -  -2.5  -3.95219   GGGAAAGTGGATAAA            GACTGGAAC TCT GTTGAAGTC            GATGTGAAAAGCATT  52 434
CLC90_RS12820 2772782 .. 2772798 - -10.1  -4.49316   ACCATCAATAATAAA              GGCTCCC AAT AGGAGCC              TAGGCAATGTGAGTC 100 60
CLC90_RS12815 2771655 .. 2771683 -   -11  -4.67697   GCTGAAAATAATAAA       GGCCGGGTATGCT GAAT AGCG-ACCCGGCC        TGTTTTTTGCATAAT 100 61
CLC90_RS12800 2768806 .. 2768816 -    -4  -3.31726   TCCTTCCAGATAATA                 CTAA TCA TTAG                 CCTATGACAGCACCG  51 27
CLC90_RS12795 2768239 .. 2768254 - -11.8  -5.66229   AGCAACAATAAAAAA              CCCCGG GGGG CCGGGG               AAAATGTCAAAGATA 100 65
CLC90_RS12790 2767060 .. 2767072 -  -7.7  -3.74137   AAATCAACACAAAGA                GGAGT AAA ACTCC                AATTGAGTGTATAAG  72 202
CLC90_RS12785 2765349 .. 2765370 -   -13   -3.9941   CGCCCCATAAGCAAA           GCCCGGCT GAGATA AGCCGGGC            GGGAAGAAACCGTAT 100 53
CLC90_RS12780 NONE
        cysT NONE
        cysW NONE
        cysA 2761168 .. 2761185 - -10.5  -5.25735   GTAAAAAAGTAAAAA             GGCGGCC TGTA GGCCACC              TCAGACTGCTGACAA 100 188
        cysM 2760105 .. 2760120 - -10.4  -5.18726   TGCGGATAAGAAAAA              CGACGC TTCG GCGTCG               TTTTTTATTTATTAG 100 118
        zipA 2753969 .. 2753985 - -10.8   -5.5762   ATCAAAGATAAAAAA              CCCCCG GCATG CGGGGG              TTCGGGTTAATTCGT 100 58
        ligA NONE
CLC90_RS12720 2751490 .. 2751505 -  -4.7  -4.68506   AAGGAAGCGGAAAAA              TCGCA ACAAAA TGCGA               GTACCACCAGCCAAA  73 176
CLC90_RS12685 NONE
CLC90_RS12680 NONE
CLC90_RS12675 NONE
CLC90_RS12670 NONE
CLC90_RS12665 NONE
CLC90_RS12660 NONE
CLC90_RS12655 NONE
CLC90_RS12650 2746844 .. 2746857 -  -9.5  -5.02074   TGACTGTTGAAAAAA               GGCGC TGCG GCGCC                TTTTTTATCTCAACG 100 387
CLC90_RS12640 2743933 .. 2743968 -  -6.9  -4.32034   TCACGACGATTAAAA   CTG--GCTCCGGCGGTGA GCT TCGCCGCCGG-GCATCAG   ATTCTCGCTATATCA  74 76
CLC90_RS12625 2741927 .. 2741949 -  -2.6  -5.31877   ATCGATCACAAAAAA           CGTTTCAGCC GTG GGAAAAAACG           TTTGAGTTGCGTTTT  76 61
CLC90_RS12620 2740790 .. 2740811 -  -7.3  -5.36441   CTGTGACATAAAAAA           CCACGTC GTTAATCT GACGTGG            TTTTTTATTGCTCAT  91 56
CLC90_RS12595 NONE
CLC90_RS12590 2733121 .. 2733136 - -11.8  -2.82834   TATTCCAGCATTAGA              GGGCGC AAAT GCGCCC               TTTGTCATTTTATTT  83 35
CLC90_RS12575 2730846 .. 2730863 -  -9.1  -5.04265   AAAAAAGATCAAAAA             GGGCCAC ATAA GTGACCC              GAAAATAGGATAAAA 100 67
CLC90_RS12570 2730005 .. 2730015 -  -5.4  -3.60316   ATGCTTTTAAAAAAC                 GCTT ATT AAGC                 CTTATCAATAAGGTA  59 339
CLC90_RS12565 2728620 .. 2728630 -  -5.4  -4.14739   TTAGTCATGTGAAAA                 CTGA TTA TCAG                 TCATATCGCTATAAA  65 149
CLC90_RS12560 NONE
CLC90_RS12555 NONE
CLC90_RS12550 NONE
CLC90_RS12545 2725484 .. 2725505 - -12.3  -2.91334   GATAGTAGAGAACCA           TACCCGGCC CAGC AGCCGGGTA            TTTCTTATCTGTAAT  93 48
CLC90_RS12535 NONE
CLC90_RS12530 NONE
CLC90_RS12525 2721754 .. 2721764 -  -6.8  -3.22476   ACTAGGCATTATCAA                 CTGG TAA CCAG                 TGGTAACAGGCTGAT  59 161
CLC90_RS12520 2720847 .. 2720865 -  -6.7  -4.22375   ATATTACTGAAGAAA             CGTCTCC CCCAC GGAAACG             GCACTACACCGCACC  71 401
CLC90_RS12515 2718236 .. 2718248 -  -4.7  -3.64831   GTAAGAACTATAGAA                CTGCG GGC CGCTG                AATGGTCTGAATTTG  57 490
        ccmA NONE
        ccmB NONE
CLC90_RS12485 NONE
        ccmD NONE
        ccmE NONE
CLC90_RS12470 NONE
CLC90_RS12465 NONE
CLC90_RS12460 NONE
        ccmI NONE
        mlaA 2708547 .. 2708574 - -15.8  -3.37879   ACGAACGCCAACCAA        TAAAAAAGCGCC TTCC GGCGCTTTTTTA         TTTTCAACATTCCCG 100 49
CLC90_RS12440 2706234 .. 2706253 - -10.8  -4.60797   TCCTGAGAGATAAAA            TGGCATTC ACCC GAATGCCA             GGTTAACAGGTCTGA 100 254
        fadI NONE
        fadJ 2702616 .. 2702628 -  -2.7  -4.91873   TACAGGAAGCAAAAA                TGCTA AAA TAACA                GGCGGTGATCGCGCT  70 93
        sixA 2701659 .. 2701693 - -12.3  -4.26953   AATTAACCGAATAAA    TTAAGGGCGTG-ACAG AAAA CTGTTCACGCCCTTAT     TGGTGATGCCTTGCC 100 120
CLC90_RS12410 2699966 .. 2699979 -  -8.1  -3.72241   CAGGAATTACGGAAA               GGCAC CGCG GTGCC                TGCCGCTTAGTCGCG  70 32
CLC90_RS12405 NONE
CLC90_RS12400 NONE
CLC90_RS12395 2697138 .. 2697150 -  -4.1  -3.88498   CCCTTACATATGAAA                TGGAA TTA TCCCA                TTAAGTCCGGCAACT  57 39
CLC90_RS12390 2696484 .. 2696495 -  -2.2  -3.01745   CTGGCAACAATTAGA                CGAA ATCT TCCG                 GATAAGGGAAGTGCT  42 9
CLC90_RS12385 2696117 .. 2696151 - -12.9  -3.92075   ACCCTGAGTGACAAA    TC-GCTGCCGTGGTGC ATTA ACGCCACGGCAGCAGA     AGAACTTAGTGAGCC 100 31
CLC90_RS12375 2692612 .. 2692636 - -15.1  -5.80817   TCGAAGATAAAAAAA          TCCCGAACTGA AAA TCAGTCCGGGA          TTTGAGTCACTATTG 100 75
        lpxO 2691039 .. 2691064 -  -5.3  -3.04792   CGATTATTGCCAACA         GCGTTTTCAGG CTAG CCCGACCACGC          CGCTGACTCAAACTC  51 363
CLC90_RS12360 NONE
CLC90_RS12355 NONE
CLC90_RS12350 NONE
CLC90_RS12345 2686146 .. 2686160 -  -4.2  -3.61715   CAGGCCTGGCAACAA               GGCG TGACCTT CGCC               CGCGGTAGCTGTTTT  55 276
CLC90_RS12335 2683114 .. 2683130 -  -6.6  -2.56046   GTAAAGGTGAATTGA              TGATGC TGGCT GCATCA              ATCTCTTACGCCTTG  52 499
CLC90_RS12325 2681674 .. 2681687 -  -3.8  -4.13437   CAATGAAAAAGATAA               TGGC TATTTT GCCA                CTGAATGACTCTGAA  60 74
        pdxB 2680443 .. 2680459 - -12.3  -3.77188   ATTCAAATACAAAGA              GGCGGTA AAT TACCGCC              TTGATAATCATCGGT 100 60
CLC90_RS12315 2679402 .. 2679415 -  -4.5  -3.81951   TCGGACATCAGTAAA               GCTGC TCCT GCAAC                AGACGCTCAGCCGTT  59 4
        truA 2678542 .. 2678559 -  -4.1  -3.78329   CGCTACCAACTTAAA             GCCA-GCG ATC CACCTGGC             ATCAATCATCGGCTA  57 27
CLC90_RS12305 2677648 .. 2677659 -  -5.8  -5.12068   CACACCCAATAAAAA                GTGC CTGA GCAC                 CACACCAACAGGGCG  85 162
        accD 2676619 .. 2676648 -   -13  -2.76815   ACGCGGGGTAATAAT       CGGGTATCACTC GATGAA AAGTGATACCCG        TTGACCCACTTAGTC  91 35
CLC90_RS12295 NONE
        dedD 2674379 .. 2674411 - -12.2  -4.55295   CCCCGGATAAATAAA     GTGCGGCGATT-TTA AAAA CAACAATCGCCGCAC      AAACTTAGCTTAATC 100 88
CLC90_RS12285 2673773 .. 2673786 -  -2.3  -2.57132   GTCTTTCCTCATAAG               CCGCT CCGA ATCGG                TAATTGATTCGGCAA  40 5
CLC90_RS12280 2672105 .. 2672134 -  -6.5  -5.35459   AGATATGACAAAAAA      GGTGCA-CC-GCG AAAGAA CGCCGGTTGCACC       TTTTTGATTCATTTT  89 129
CLC90_RS12275 2671294 .. 2671306 -  -7.7   -2.6993   ATAAACCGAAAGGCA                GCACA GCC TGTGC                CGGGGCAGAATACGA  60 146
        hisJ 2670289 .. 2670316 - -15.6  -3.85698   GCGGGTTGTCAGAAA        CGGCCTCTGCCA ATGC TGGCAGAGGCTG         AGCAACCTGTCGGTT 100 51
        hisQ NONE
        hisM NONE
        hisP 2667556 .. 2667573 -  -5.5  -4.09739   CCAACGCTGGGAAAA             TCTGGCG CTGG CGGCAGA              AAGTCCACAAACCCG  64 494
CLC90_RS12235 2663877 .. 2663893 -  -5.7  -3.90318   CTATTACTGCATAAA              CCGAGGC GAG GCCCCTG              TCAGGTCACAAACTG  63 26
CLC90_RS12230 2663047 .. 2663063 -  -2.3  -3.13522   ATTTGTTGATCAATA              GTGTTTT TCA AAAACAA              CGTTATAAGTATGTG  43 74
        yfcD 2662383 .. 2662404 -  -7.2  -5.52023   ACCATCAATAAAAAA           GGCGCCGA GAATTA TCGGGGCC            TTTTTATCATTTACT  95 65
CLC90_RS12205 2658928 .. 2658947 - -10.7  -4.56597   GGTTTGTTGTAAAAA            CGCCAGC TTTCGC GCTGGCG             TTTTTTATCTGGTCG 100 60
CLC90_RS12190 2654574 .. 2654605 -  -2.8  -2.94144   GGTTTAGTGAAAGGA      TTCACCGAGAGTCG CTGC CGCCCCTCGGCTTA       GGGCTGATTTATCGT  43 50
CLC90_RS12185 2653576 .. 2653594 -  -5.2  -2.64794   TGGAATCGCATACCA             CCAGCAGC ATG GATGCTGA             TGAGCCTTATTGCGA  48 402
CLC90_RS12175 2650631 .. 2650649 -    -3   -4.3739   CACGGTTGGAGAAAA             CCCTCGCG ATG CGCCAAAG             CCCGGAAATGGATTA  62 230
        lrhA 2646935 .. 2646960 - -12.7  -4.43307   TTGCTAAGAAAATAA         TAATCCCCTGC TATA ACAGGGGATTA          CGGACGAAGCATGAT 100 55
CLC90_RS12155 NONE
CLC90_RS12150 2645134 .. 2645148 -  -4.3  -3.14132   TCGCTGTCGTACCAA               GATTG GCTGT CAATC               GACAGAATCAAATCT  49 33
CLC90_RS12145 NONE
        nuoE NONE
        nuoF 2641231 .. 2641261 -  -4.1  -3.01712   GCTTGTGGCTGAACA       GAGTCAATGTC TGTCACCGC GACATTGAATC       GGTTGGTTTACAAGC  47 89
        nuoG 2638477 .. 2638489 -  -4.8  -3.24137   AACCAGCTCATAATA                CTGC CTCCC GCAG                GTTCTCAACGCGGGT  53 5
        nuoH NONE
        nuoI NONE
CLC90_RS12115 NONE
        nuoK NONE
CLC90_RS12105 2634224 .. 2634235 -  -5.8  -3.54146   GTCCCTAATTAAAGA                GCCT ATTC AGGC                 TTCTAAACGAAAAGC  59 28
CLC90_RS12100 NONE
        nuoN 2631137 .. 2631164 - -15.6  -4.87291   GACGGTAATGAAAAA        CCCCCTGCCAGC TCAT GCTAACAGGGGG         TTTTTCATCAACACA 100 72
CLC90_RS12090 NONE
CLC90_RS12085 2629837 .. 2629878 -  -4.5  -3.92522   GCTGAACCGGATAAA TAGCCTGACCTGATTTTTT AGAT AAATAACCAAGAGAGGCTA  ACTTCTGCGCGACGA  61 64
        menF 2627979 .. 2627993 -  -5.6  -5.06414   GGTGGCGAAGAAAAA               GCCCTG CGC CAGGCC               AAAGTTTTGTCGTTC  82 351
CLC90_RS12075 2626241 .. 2626259 -    -3  -2.82516   CTGGCCAGTATCACA             GTTCAGCG ACC CGTTGCAC             CAAATGTTGCAGGGT  43 2
CLC90_RS12070 NONE
        menB NONE
CLC90_RS12060 NONE
CLC90_RS12055 2622194 .. 2622215 -  -5.1  -3.33815   AGTCGCTTCAACCAA           GCAGGAG-GG TCG CCTCTTCTGC           TCGGTTGAAGCTAAA  55 85
CLC90_RS12045 2619670 .. 2619696 -  -2.2  -3.73042   TGGGGTAGGAAAAGA        CGGGGGC-CAG TTTATG CTGCGCACCCA         TTTTATCAGGTGCGC  49 80
        cinA 2613310 .. 2613322 -  -4.7   -3.0082   AAGCCAGTAAAGAAG                TCCGC AGT GCGGT                AGAAAAATAATCTAT  50 263
CLC90_RS12010 2611380 .. 2611402 - -13.5  -3.23984   TAAAGCGATCATCAA           CCTGCGTAC TTCAG GTACGCAGG           TACCCTATTCTGACA  88 331
        gyrA 2603583 .. 2603600 -  -8.4   -5.3236   ATAACCCATAAAAAA             GCCAGC ACGCTG GCTGGC              TTGAGTTTTCATCAT 100 83
        rcsC 2600476 .. 2600488 -  -7.7  -5.28778   AGTAGCCAGAAAAAA                TCAGC CAT GCTGA                AACTGGGTGTAGATA  93 197
        ompC 2593894 .. 2593919 - -15.5  -3.43288   TAAAGCCGAGCATAA         GAAACGCGACC CAAA GGCCGCGTTTC          TTCATCAGAACGTTC 100 56
CLC90_RS11955 NONE
CLC90_RS11950 2593495 .. 2593510 -  -7.6  -6.32216   ACAGACAAAAAAAAA              GACATC CGAA GATGTC               TTTTTCTACTTCTGG 100 38
CLC90_RS11945 2592687 .. 2592736 -  -7.7  -2.81951   GCACCAAGATATAAC TGCCGCTCTTGCGAGCCAAGACG CTAA CGCACTGGCAGACAAGAGCAGCT TATATCCCACCTGAC  61 100
CLC90_RS11935 2589777 .. 2589791 -  -2.8  -4.46233   GGAACGTGAAAGAAA               TACCGG GAG CCAATA               GTCTGATCCTGGCTG  62 320
CLC90_RS11875 NONE
CLC90_RS11870 NONE
CLC90_RS11865 2581674 .. 2581694 -  -6.1   -3.2794   GCTCAGTCATATCAA            GCCGCCT TAGGCGC AGGCAGC            GCCAGATAACGAAAT  59 1
CLC90_RS11860 NONE
CLC90_RS11855 NONE
CLC90_RS11850 NONE
CLC90_RS11845 2579373 .. 2579383 -  -3.2  -3.94773   TGCCAAGACAAAATA                 CAGC AGC ACTG                 AGTTTTTATCCAGCA  56 31
CLC90_RS11840 NONE
CLC90_RS11835 2577567 .. 2577579 -  -2.6  -2.52896   CCACTGTTTAACCGA                CCCG CGTGC CGGA                TGCCTATACACAACA  41 45
CLC90_RS11830 2576581 .. 2576598 -  -6.2   -5.4387   ATATAAACGAAAAAA             CCCCGC ACAATG GCGAGG              TCTTTGATATGGAGT  91 150
CLC90_RS11825 2575057 .. 2575081 -  -3.6  -3.08046   CCGCCACTTTAAAAT          GGAACGAT AAGCATACA ATCGCTCC          TGATAAGCGTCCATG  48 211
CLC90_RS11820 NONE
CLC90_RS11815 2573502 .. 2573519 - -11.3   -4.4874   CTTAAAAATGCAAAA             GGCTCAC CGAA GTGAGCC              TGAAGTTATTATTTA 100 47
CLC90_RS11805 2572635 .. 2572654 -  -9.2  -5.46698   GCTAAAACGAAAAAA            GGCCACGC AATA GCGCAGCC             TCATAATTATTTACC 100 79
CLC90_RS11800 NONE
CLC90_RS11795 NONE
CLC90_RS11790 2571290 .. 2571307 -  -9.1    -5.626   TACTGCATAAAAAAA             GCCCGAC CTAA GTCGAGC              CTTCTGTTTTCTTTG 100 51
CLC90_RS11785 NONE
CLC90_RS11780 2569965 .. 2569986 -  -5.9  -2.55019   AATGTTAAAAATTAT           CGAAAAAAG ATTT CTTATTTCG            GACGTATAAAAATCT  52 114
CLC90_RS11775 NONE
CLC90_RS11770 2567716 .. 2567728 -  -2.6  -3.87551   ATGAGTAAACCGAAA                CCGG CTACC CCGA                TAATGTCGATAATCA  52 47
CLC90_RS11765 NONE
CLC90_RS11760 NONE
CLC90_RS11755 2564502 .. 2564513 -  -7.2  -5.60993   GCGGGCATAAAAAAA                CCGC GAAA GCGG                 CATGTTTTAAGTCCG 100 48
CLC90_RS11750 NONE
CLC90_RS11745 NONE
CLC90_RS11740 NONE
CLC90_RS11735 NONE
CLC90_RS11730 NONE
CLC90_RS11725 NONE
CLC90_RS11720 NONE
CLC90_RS11715 2560297 .. 2560307 -    -4  -2.73799   GCCAGAAATAAGCGA                 TGTT ATA AACA                 CGAGTAGTGAGATCC  46 42
CLC90_RS11710 NONE
CLC90_RS11705 2557773 .. 2557786 -  -9.5  -5.14563   CCGGGCATTAAAAAA               CCCGC CGAA GCGGG                TTAATTATTTATTGG 100 49
CLC90_RS11700 NONE
CLC90_RS11695 NONE
CLC90_RS11690 NONE
CLC90_RS11685 NONE
CLC90_RS11680 NONE
CLC90_RS11675 NONE
CLC90_RS11670 NONE
CLC90_RS11665 2550993 .. 2551010 -    -7  -4.60255   ATAATCTCTTAAAAA             CCAACC CATTGC GGTTGG              TTTTTTTATGGGTGG  79 491
        yejK 2547382 .. 2547407 - -11.9   -4.7373   TGATGCGATGAAAAA         TGCCAGCCAGT TCAT ACTGTCTGGCA          TTTTTTGTGTTTATT 100 191
        rsuA 2543990 .. 2544027 -  -6.3  -3.03338   ATAACTCCTTCAATA   GCCTAGGTTCTCAGAAT TTTC ACCCTGAGAACGCAGGA    AAAAACCAGTAACCT  56 79
CLC90_RS11620 2542736 .. 2542761 -  -7.5  -2.63922   CAGCAGGCAAAAAGC         GTGCTGCCAGT CATC ACTGGCAGCGT          TATGTATTCACGAAT  58 40
CLC90_RS11615 2541341 .. 2541368 -    -4  -4.72986   GAGGTTCATCAAAAA        CTCACCGTTGCC GAGC GGGAACAGCGCG         TCATCACCGCAATGG  71 422
CLC90_RS11570 2530542 .. 2530559 -  -2.7  -4.34285   GATTCAAACAAAGAA             CCATC AAAGTCAG GATGG              TCTGCATCAGATATT  59 203
        uxuA 2527337 .. 2527367 - -14.8  -3.64703   TCTCGCTGATTCAAA       CGTTAAGAGCCGGT AAA ACCGGCCCTTAACT       GTCAACCTATTGAAT 100 46
CLC90_RS11535 2524701 .. 2524719 - -11.8  -3.61988   TCACTGATAAATCAA             GGCGATAT CTA ATATCGCC             TTTTTTATGCCTGAA  93 55
CLC90_RS11515 NONE
CLC90_RS11510 NONE
CLC90_RS11505 2516286 .. 2516303 - -11.3    -5.626   CACGGGATAAAAAAA             CCGGAGT CTGC ACTCCGG              TTTTTTTTGGCTCAA 100 50
CLC90_RS11490 2513535 .. 2513546 -  -2.2  -4.07568   TTTGCGTGCCGAAAA                CGAA AATA TCCG                 ATGATGTGGGCTACG  53 142
CLC90_RS11485 2512414 .. 2512445 -  -8.7  -5.40072   TCTGCTCTAAAAAAA      TCGAGGCGGGATT GTAACA AATCCCGCCACCA       TGGGTAGTCTGAATG 100 170
CLC90_RS11480 2510819 .. 2510838 - -12.2  -5.14563   TTTCTCATTAAAAAA            GGGCGATT AAAT AATCGCCC             TTTTTTACACTCACT 100 80
CLC90_RS11475 2509442 .. 2509466 -  -4.3  -2.87931   GTTACCTGTTACAGA          CTATTTCGTTG AAT CAACCCAATAG          GTTCCGGTTGGCTCA  46 1
CLC90_RS11470 NONE
CLC90_RS11465 2507504 .. 2507538 -  -7.3  -4.28069   ATATAACTTAATAAA     CCACCATATTTATCT GGAAT ATATAAATACGGCGG     CCTGAATTTTAAATT  75 39
CLC90_RS11460 2505078 .. 2505106 -  -3.9  -5.54192   ACGAATGCAAAAAAA        TAACCGACG AGTGATTAAAA CGTCGGCTA        TTTCTTGGCGCGTAT  84 306
CLC90_RS11455 2504743 .. 2504767 -  -4.3  -3.05844   GTGCCGACCTGAACA          GTTGAATTATG CGA CATGATTCAGC          CTCCCCATACCTTCG  47 7
CLC90_RS11450 2503324 .. 2503341 - -11.3  -5.60993   TCTCGCATAAAAAAA             CGGAGCT AATC AGCTCCG              TTTTTCATCACAAAT 100 55
CLC90_RS11440 NONE
CLC90_RS11435 2499234 .. 2499245 -  -3.6  -2.99704   TTGGCAGTAAATAAC                CGAC TATC GCCG                 CATAGTCATATGAAT  46 17
CLC90_RS11430 2498681 .. 2498700 -   -15  -3.23598   GAACCAATGCACTAA            GGCCAGGC AATC GCCTGGCC             TTCTTGTTTTGCCCG 100 53
        citC NONE
        citD NONE
CLC90_RS11365 NONE
        citF NONE
        citX 2481378 .. 2481394 -  -2.9   -4.1964   GCCAACAGTGCAAAA              TAGGCCA TCT CGGCATA              ATCCTGCACCTGAGC  57 57
        citG 2480531 .. 2480543 -    -2  -3.10761   ACTTCAACATAGAGA                TACT CCTGT AGTA                TTGTTATTATTGTGT  43 1
CLC90_RS11345 2478861 .. 2478871 -  -2.4  -3.08638   ATAATCAAACCAAAT                 CGCC AAG GGGG                 TTTTATAGTAGAGGT  43 216
CLC90_RS11340 2478096 .. 2478110 -  -5.8  -2.83715   GTTAGGAGCACTAGA               TAATCA ACA TGATTA               ATAAGCGATAAAAGT  53 23
CLC90_RS11330 NONE
CLC90_RS11325 NONE
CLC90_RS11320 NONE
CLC90_RS11315 2470738 .. 2470763 -  -7.7  -3.48276   CCTTCTTGTAGATAA         GAACTGGAT AGTTATTG ATCCAGTTC          TTATCTGATGACTAT  68 54
CLC90_RS11295 2466471 .. 2466487 -  -5.9  -3.96148   CTTGTTTATCAGAAA              GGTTAAT CTG ATCAACC              TAACATAGACATACA  66 122
CLC90_RS11290 2464686 .. 2464698 -  -3.3  -3.11738   TATTGCAATAGAAAC                CGAGC GGC GCTTG                AAGACTCGAGCACGC  46 466
CLC90_RS11205 2446940 .. 2446982 -  -7.3  -3.37236   AATTCAACCGTACAA CATCATCAATTGGTTCGATA TAGC TAACGAATCAATTGAT-ATG TCTGATTTATCCATT  64 239
CLC90_RS11195 2445943 .. 2445956 -  -8.1  -2.91912   TCACTGATTTACATA               GGCCA AGTA TGGCC                GTTCTAGGTACGCCA  62 196
CLC90_RS11190 2445104 .. 2445138 -  -3.5  -4.32678   TTCTGAAACAAATAA     GGGAAATATCTGGGC ATCAG GTACTGATATTCCCC     GGTGACCATAACCCA  63 515
CLC90_RS11170 2442766 .. 2442794 -  -8.2  -3.41073   TACTCTAGGTAAATA        CCTTAAGGCCAC CTAGC GTGGCCTTAATA        GCGTGGTTTAGGTCA  71 72
CLC90_RS11135 2433425 .. 2433438 -  -9.5   -5.4833   TCAGGCAATAAAAAA               CCCGC CTAA GCGGG                TTTTCTCAATAATTA 100 53
        dsrB 2432964 .. 2432993 - -14.3  -5.50313   GATAAAAGCAAAAAA       CCGGAGCAAGGTA ACCA TCCCCTGCTCCGG        TTTTTTTATATGCAG 100 44
CLC90_RS11120 2429323 .. 2429361 - -13.5  -3.35996   GATGTTCATCCATAA   TAACTACTTACTCTC CGACGGGGT GAGAGTAAGTAGTTA   TTGACGACCTGATAG 100 85
CLC90_RS11110 2427520 .. 2427535 -  -6.2  -3.00946   TTTTCTTACAAAGGA              TTAGGA ATAT TCCTAA               AGAGGGGCAACTCTA  56 182
        flhD NONE
        flhC NONE
        motA NONE
        motB NONE
        cheA 2422052 .. 2422064 -  -7.7  -4.07568   GTCGCTCGGCGAAAA                CTGTC ATT GACAG                TACGCCGGTGAAATA  74 106
        cheW 2421217 .. 2421233 - -11.5  -5.00616   TGCTGTTGTAAAAAA              GGCGGGG TAT CCCCACC              ACAAACTGCTGACAA 100 220
CLC90_RS11075 NONE
CLC90_RS11070 2417710 .. 2417722 -  -5.5  -3.34716   TCACCCTTTAAAAAT                GACGT ATT ACGCC                GTTTAACAATCTGAA  55 28
        cheR NONE
CLC90_RS11060 2415726 .. 2415739 -  -4.5  -4.37711   CGATTAAATGCAAAA               CCGAT TATC ACCGG                AATGTTTAAATCTGA  66 50
        cheY NONE
        cheZ 2414584 .. 2414625 - -13.9   -3.4149   ATTGAATGCTAAACA CTG-GCTTTGCAGATGAGGG TAG CCCTCATCTGCAAAGTGCAT TTACTTTTGGTCTAA 100 37
CLC90_RS11035 2412047 .. 2412058 -  -5.8  -5.03314   GGTAGGGCGAAAAAA                CCAC CTAA GTGG                 TGTACTCGAGAATCC  82 177
CLC90_RS10995 2402614 .. 2402627 -  -6.7  -2.70932   GTGCCTCTGGAACCA               TGCAG TGAT CTGCA                TGGTTATTTAAAGTC  56 49
        flhB NONE
        flhA NONE
CLC90_RS10970 2395321 .. 2395333 -  -5.5  -3.73953   ATTATCTGGATCAAA                GCCGT TTG ACGAC                CGAAACTGCGGTCAG  59 476
        flgB NONE
        flgC NONE
        flgD 2392283 .. 2392304 -  -2.9  -3.64822   ACTGCTTTAGCTAAA           CTGCTTTCC GTGC GCGAAGCAG            CGGACTTACAGGATC  50 31
CLC90_RS10935 NONE
CLC90_RS10930 2390085 .. 2390101 -  -4.5  -2.52464   GGTTTTGGCAATCCA              TAATGAT CGG ATCATCA              GTGTATTCCTCTGCG  47 50
        flgG 2389285 .. 2389308 - -14.6  -3.05463   ATCGGCTTCACGCAA          TCAGGGGGCA ATCC TGCCCCCCGA           AAACGGTCTTATAGC 100 34
        flgH NONE
        flgI NONE
        flgJ 2386374 .. 2386399 - -11.9  -5.44721   ATGAGTGTAAAAAAA         CCGCCCACAGA CAAG TCTATGAGCGG          TGGGTAGATTGAACA 100 60
        flgK NONE
        flgL 2383361 .. 2383401 -  -6.8  -4.72201   GCGGATAAAAAAGAA  GGTATGCCATCCCAAACC TTAGT GGGAAAAGATGGCATACC  GAAAAGTGTACCCGG  79 96
        fliE 2371127 .. 2371147 -    -4  -5.36441   CCGCCAGATAAAAAA            CATCATTC CACCC GCATGATG            AAATCGTTTTATTAA  81 521
CLC90_RS10825 2370032 .. 2370053 -  -5.9  -4.08706   TCTCTATCAGATAAA           TATCAGGCT GAAT AACCCGATA            ATTTACTTCAAGCCT  68 33
CLC90_RS10820 2368663 .. 2368708 - -12.2  -3.94188   AGCCATCTTAAACAA GCACAATAACCGAGGATAGAC GATAA GT-TATTCTCAGTTATTGTGC TGATGATTAATTGGT 100 32
CLC90_RS10790 2360588 .. 2360607 - -12.8   -5.4251   CGCAGAGACAAAAAA            GCCCCCGC CAAA GCGGAGGC             TTGATAGCATTGCCA 100 49
CLC90_RS10785 2359100 .. 2359119 - -12.8  -5.49569   TACCAAGACAAAAAA            GCCCCCGC CAAG GCGGAGGC             TTGATAGCATTGCCA 100 49
CLC90_RS10780 2357619 .. 2357635 -  -7.2  -4.74285   ACCGATAAGATAAAA              GGCGGC GAAAT ACCGCC              TTTTGTTATTTAAAA  81 51
CLC90_RS10775 NONE
        fliZ 2355912 .. 2355942 -  -6.2  -5.30616   GGATGTAAATAAAAA      TGCCCAACAG-GA CATATT TCACCGTCGGGCA       TTAATCAATATTTAA  89 47
CLC90_RS10765 NONE
CLC90_RS10760 NONE
CLC90_RS10755 NONE
        yecC 2352236 .. 2352253 -  -7.7  -4.13767   TTCTGTATTTGAAAA             GAGGC-CC TTC GGCGCCTC             TGAGGCTCATAACCA  76 239
        putP 2346215 .. 2346248 - -11.7  -3.02946   GGGGGAATCAGAAAG     GCGCTCACTGCCGGT TGGT ACGGACAGTGAGCGG      ATTAAGACCATTTAG  83 37
        cadC 2344298 .. 2344342 -  -5.2  -5.28561   AATACACAATAAAAA CATGACGTTACATTTGTTAT TTTAT ATAACAAATGTAAAGTGTCG GGAGTAACTCACCAA  84 126
CLC90_RS10730 2342661 .. 2342674 -  -2.3  -3.64822   ATTTCTCCAGGTAAA               GCGAG GCCC CTTGC                CATCACGGATGGCAA  49 85
CLC90_RS10725 2340396 .. 2340426 -  -8.3  -5.06816   AGCCGTTAATAAAAA      GCGTGGCGTCAGGA TTAT TCC-AACGTCACGC       TTTTTTATTATTTTA 100 99
CLC90_RS10715 2338373 .. 2338401 -    -7  -3.81027   GGGAATCAATTGAAA       TGGTGAAAAGATA TGTG TAT-TTTTCACCA        AATCATTTAAATGAA  69 141
CLC90_RS10705 2336807 .. 2336819 -  -5.5  -4.57073   TATTTCCGTCAAAAA                TCAGC AGA GCCGA                ACCGTGATAATCCAA  70 88
        uvrY NONE
        uvrC NONE
CLC90_RS10685 2332261 .. 2332274 -  -2.4  -3.02511   GCTATTCCCGCAACA               TCAG AACTTA CTGA                TTTCTTTTGCTATCT  42 152
CLC90_RS10680 2332156 .. 2332169 -  -4.5  -3.68351   GCCTTACTACTCAAA               CTCGC TATT GCAAG                CTTTATAAATTTGGA  57 37
CLC90_RS10675 NONE
CLC90_RS10670 2331899 .. 2331912 -  -9.5  -6.23317   ATAAAAACAAAAAAA               CCGCC TCTC GGCGG                TTAACGACATACTCA 100 72
CLC90_RS10620 2319205 .. 2319225 -  -3.3  -5.06585   TAAATCACATAAAAA            CGACATTAA TAC TGAATGTCA            GTTTATTATTCGACT  71 507
CLC90_RS10610 NONE
CLC90_RS10605 2317901 .. 2317922 - -10.1   -5.4251   TCTACAGATAAAAAA           CGCAGCTAG CTTC CTGGCTGCG            TTGCCATAAGGCGAA 100 52
CLC90_RS10600 2316108 .. 2316127 -  -2.8  -3.53444   CCAGGTTCTTTTAAA            GGCGTTTC TAGC GAAATACC             CTTTCTAATGAATGA  49 463
CLC90_RS10575 2309568 .. 2309584 -  -6.7  -2.81815   GGGAATGAGTAACGA              GAAAATA TAA TATTTTC              ATTTTTAATACCGTC  57 165
CLC90_RS10570 2308091 .. 2308105 -  -8.5  -5.06414   CGCTGTTAACAAAAA               GCCCC TTATC GGGGC               TTCAGACTGGCGATT 100 43
CLC90_RS10555 2303296 .. 2303308 -  -2.6  -3.64703   CTGCTGCGAGCCAAA                GGCA TTACC CGCC                TGTTTGCCTCTGTTG  51 367
CLC90_RS10540 2300309 .. 2300323 -  -3.6  -2.78596   GAGTGGGTCACCATA               GTTCTT CCG AAAAAC               GCAAACTATACCTGA  45 297
        rluF 2299374 .. 2299398 -  -7.9  -4.25104   CCGTGTGCAGTAAAA         CCCCGTCCTT CATTGC AAGG-CGGGG          AATCATCATACGGCG  79 62
CLC90_RS10530 NONE
CLC90_RS10525 NONE
CLC90_RS10520 NONE
CLC90_RS10515 2295219 .. 2295235 -  -5.1  -2.55021   AAATAACCGACGAAT              CTGAGCC ATA AGCTCAA              TGTTATCTGGATCAA  49 37
        chbR 2294320 .. 2294335 -  -5.4  -2.52676   TACCTTGTTAATGTA              TTCCGC TGTG GCGAAA               TGAGCGGAAAACTAA  49 37
CLC90_RS10505 NONE
        cspA 2291313 .. 2291332 -  -2.1  -3.60475   AACTTTTACGGTAAA            CCGTTAA CACTAT TTTACGG             GAGAGAAATATTCAC  49 96
        cspA 2290845 .. 2290864 -  -2.1  -3.60475   AACTTTTACGGTAAA            CCGTTAA CACTAT TTTACGG             GAGAGAAATATTCAC  49 96
        cspA 2290380 .. 2290392 -  -6.2  -6.09196   CTCAAAATAAAAAAA                CCGC TCAAG GCGG                TTTTTTATTTTGACT 100 100
CLC90_RS10460 2288119 .. 2288136 -  -4.9  -3.57239   ACCGAAATATTATAA             TACAATG CTCT CATTGCA              GGCATATCACACTAA  55 325
CLC90_RS10455 2286827 .. 2286844 -  -8.4  -4.60041   ATGCATCGGCAAAAA             GGCTGC GATCAG GCAGCC              TTCGACAAGAATCCA  91 48
CLC90_RS10445 NONE
CLC90_RS10440 2283965 .. 2283997 -  -8.6  -4.90266   TTGATTAACCAAAAA      CCCCATTGCATTAA AAAAA TTAATGTAATGAGG      AGCAAATGATAACAT 100 395
CLC90_RS10435 2282423 .. 2282436 -  -8.1  -3.36452   ATTGCCGAAGAGGAA               GAGCG TCTG CGCTC                GATTCAGAATCCCGA  66 115
CLC90_RS10420 2277714 .. 2277724 -  -2.4  -4.32804   ACAACCAATGCAAAA                 TGCG CGT CGCC                 AATGCCGGACTGATA  58 365
CLC90_RS10410 2275877 .. 2275898 -  -8.7   -4.4648   AGTCCGATTATAAAA           CCCGCAC CACGCACC GTGCGGG            TTTTAATTTTAACTC  93 34
        mgrB 2275184 .. 2275196 -  -2.6  -3.49866   CGATAAACAGAAAAC                CGCC CTTTC AGCG                ATACAACCATAGCTT  48 55
CLC90_RS10395 NONE
CLC90_RS10390 2274269 .. 2274285 -    -8  -2.71712   GCCCTGTCTCGAAAT              TGGCAG CGGTT CTGCCA              GCTTGTTACATGGCG  60 31
CLC90_RS10385 2273782 .. 2273792 -  -8.2  -4.41348   CTGTCCGTAAATAAA                 GCCG CGG CGGC                 TTTTTAACATTTAAA  87 192
CLC90_RS10380 2272314 .. 2272329 - -11.8  -5.71983   TCAACCATAAAAAAA              CCCGCC GATA GGCGGG               CTGAAACTACCGAAA 100 55
CLC90_RS10370 NONE
        cspC 2270016 .. 2270031 -  -7.5  -5.25893   ACACAGACGAAAAAA              CCCGC ACGTAG GCGGG               TTTTTTTTCAGCTAG  91 48
        ftsI NONE
CLC90_RS10350 2266145 .. 2266178 -  -6.8  -3.44146   CTTGCTGACAATCAA    GCCAGATAGCGCCAAC TTAT GTTTGCGC--TCTGGC     TAGCAGATTAATTAT  63 224
CLC90_RS10335 2263911 .. 2263926 -  -6.8  -2.67708   AAACGGATTACATGA              CCGGAT TACT ACCCGG               GCTTTTCATTCTCCC  53 365
CLC90_RS10325 NONE
CLC90_RS10320 NONE
CLC90_RS10315 NONE
CLC90_RS10310 NONE
CLC90_RS10305 NONE
CLC90_RS10300 2253688 .. 2253710 -  -7.7  -3.14132   TTCGTGTGGCAGTAA           GGGGTGAAC GCAAG GTTCACCCA           CTGATGGACTTAAGG  63 35
CLC90_RS10295 2253073 .. 2253103 -  -6.8  -2.67441   GAATCGATGATATGA       CACCAAAGGGCGAT ATC ATTACCCTCCGGCG       TAGGGGCCATCAAAG  56 35
CLC90_RS10265 2246256 .. 2246280 - -20.1  -4.00469   TGAAGATGAACGAAA          GAACGGGAGCC ATT GGCTCCCGTTC          TCAGATTGATGACAA 100 225
CLC90_RS10245 2241979 .. 2242008 - -15.1  -2.70452   TGGTGAAAGAAAATG       GAAGGCTTCGGCA AAGG CGCCGAAACCTTC        TGGATCGTTAGCCTT 100 33
        dbpA 2238950 .. 2238986 -  -8.8   -2.6583   TACAGTGTAAAGTGA    TTTGACGGGATGATGC AACCG ACATCATCCCGTGAAG    CTATTTTTGCCGTTT  66 81
CLC90_RS10230 NONE
CLC90_RS10225 2238230 .. 2238250 -  -3.3  -2.81471   GAGAATTCCATTACA            GAACTAACA CTG TGTAAATTC            GATCGCGTAAAACTG  43 8
CLC90_RS10220 2237685 .. 2237716 - -13.1  -3.02639   AGCGGGAAATAATCA      GTGCAGAACGCCA TCGGTC TGACGCTCTGCAC       TATCAGCCAAAATAG  95 93
CLC90_RS10215 2235335 .. 2235364 - -10.8  -3.32832   GGGAAAAATATTGAA       CAGATAGCCCGA CAGGAT CCGGACTATCTG        CGCTGGATGTTGAAA  81 106
         pip 2232834 .. 2232853 -  -4.4  -4.29845   GAACCTAAGGTAAAA            TAAAGCAGA AAT TC-GCTTTA            TTATTTTTCACGGCC  63 131
CLC90_RS10195 2231632 .. 2231664 -  -2.6  -5.32608   AAAAAAGCGAAAAAA     CCGCAGTTTCTGCCA AGAA CAGC-GTCACTGCGG      TTGATATTGATAACT  76 49
        yobA NONE
CLC90_RS10185 NONE
CLC90_RS10180 2229330 .. 2229356 -  -7.4  -5.86465   AATAAGATAAAAAAA         GACCGAATAC GAATCCT ATATTCGGTC         CAGGGAAATGGCTCT 100 244
CLC90_RS10105 2218483 .. 2218495 -  -4.1  -3.41325   GATACGCCAAGAAGA                TCCAG ATC CTGAA                AAGTCACACTCCTCC  50 161
CLC90_RS10095 NONE
CLC90_RS10090 NONE
CLC90_RS10085 NONE
CLC90_RS10080 NONE
        rdgC NONE
CLC90_RS10070 NONE
CLC90_RS10065 NONE
CLC90_RS10060 NONE
CLC90_RS10055 NONE
CLC90_RS10050 NONE
CLC90_RS10045 NONE
CLC90_RS10040 2209696 .. 2209706 -  -2.6  -3.71991   CATAAATCGCAACAA                 TAAT GAA ATTA                 TTGCACAAAATAAAA  50 41
CLC90_RS10035 2208748 .. 2208774 -  -9.5   -5.5112   CTGACCAATAAAAAA        CCGGAGCA-GCT TTTA AGCATACTCCGG         CATCTTTCGGAAATT 100 73
CLC90_RS10030 NONE
CLC90_RS10025 2207857 .. 2207878 -  -4.4  -3.70443   TTACTATGAAAAAAG           CTGGGGTA ATGGCA TACACCAG            TGATTCAGATTTCAC  54 96
CLC90_RS10020 NONE
CLC90_RS10015 NONE
CLC90_RS10010 NONE
CLC90_RS10005 NONE
CLC90_RS10000 2202098 .. 2202117 -  -8.5  -5.04601   GCCAGAAAGCAAAAA            GCCCCGC GATTAG GCGAGGC             TTAATTTGATGCTAA 100 90
CLC90_RS09995 2200821 .. 2200834 -  -5.9  -4.64846   CCATAAACGAGAAAA               CCCGC CGTA GCAGG                TCGAGAATTAAGTGT  75 50
CLC90_RS09990 2199538 .. 2199553 - -10.4  -5.01422   CCAGACAAAAAGAAA              GCAGGC CGAA GCCTGC               CTGTTGGGGGGAATG 100 47
CLC90_RS09985 2199097 .. 2199110 -  -9.5  -5.93252   TCCAAAAATAAAAAA               CCCGC CGAA GCGGG                AATGGGGATTCAGGA 100 44
CLC90_RS09980 NONE
CLC90_RS09975 NONE
CLC90_RS09970 NONE
CLC90_RS09965 2194982 .. 2194998 -  -2.3  -4.40561   TCCTTTTAAAAACAA              GTATCTA TGT TAGATAA              ACGTAGTCGTTCGCT  58 52
CLC90_RS09955 NONE
CLC90_RS09950 NONE
CLC90_RS09945 NONE
CLC90_RS09940 2189277 .. 2189312 - -17.8   -3.0169   AAGGTGCAGAAAGTA    GAAAGCCCCG-ACTGCT GCT AACAGTTCGGGGCTTTC    GCTTATCTACTCGTG 100 45
CLC90_RS09935 NONE
CLC90_RS09930 NONE
CLC90_RS09925 2187767 .. 2187779 -  -2.7  -2.98545   CGCCCATAATAATGA                TCCTT TAG AAGAA                ACTACTTGCCAGCAA  43 17
CLC90_RS09920 2186020 .. 2186043 -  -4.5  -5.80364   ACTGGAATAAAAAAA          CCTCAGCAG GCGAAT CTGTCGAGG           CTGGATTTTAGATAC  95 352
CLC90_RS09915 2177489 .. 2177522 - -14.9  -3.19522   TTACCCAATAGTTAA     TAAATTAGGGAGTTC TTTC AAACTCCCTAATTTA      CTTATTAAAATACGG 100 23
CLC90_RS09910 2175448 .. 2175481 - -11.2  -3.35996   CACCGTGAGCGACAA     GCGGACATCTAA GACTAGATAT TTAGATGTCCGC      TACTATATTGATTAT  81 92
CLC90_RS09905 2172659 .. 2172674 -  -2.4  -3.44362   AGAGAATATTCATAA              CGAAGC GTTT GCACCG               GCGGTAGTGCTTATA  47 124
CLC90_RS09880 2166224 .. 2166273 - -10.9  -4.88228   ATTTAACATTAAAAA TACATGACCGATAAATACCGGTG TTTA CTCCGGTATTTATCGATTATTCA CATGCCTATTGACAC 100 31
CLC90_RS09870 NONE
CLC90_RS09865 NONE
CLC90_RS09860 2162983 .. 2163006 -   -11  -4.17023   CTAATCACCCCAAAA          CAGCCCCCAC TAAT ATGGAGGCTG           TGAAGTTTTATCGGA  93 64
CLC90_RS09855 2162176 .. 2162191 -  -3.2  -4.30987   ATCGGCCAGAAGAAA              CGGTTA AAGC TAGCCG               TTGGAAGCAAGAAGA  61 119
CLC90_RS09850 2160750 .. 2160786 -  -6.5   -3.4214   ACCGGAATAAACATA    CCGATTTAATGCGCCAG CCT CTGGCACTTTTTATCAG    CTCGACTATTCTCAA  61 456
CLC90_RS09825 2153390 .. 2153409 - -12.2   -3.1552   GCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCC             TCCAGCAATTGCCAC  86 53
        proQ NONE
CLC90_RS09815 2150523 .. 2150546 -  -9.6  -5.02074   TCATGGCGTAAAAAA          TCCGAAGCCT CGAA AGACTCCGGA           TTGTTAAAGGTGACG 100 48
        htpX 2149319 .. 2149350 - -12.9  -3.53745   GACACTCGAAAGCAA      TCTGAGGCCCCGC GTAAAT GCGGGGCCTCGGT       GTTTTCGTCAAAGTT 100 49
        kdgR 2146534 .. 2146554 - -14.7  -4.18197   ATGCTGCATGGAAAA            CGGCCCCTG AAT CAGGAGCCG            TTGAGATACGCGGGT 100 93
CLC90_RS09790 2145263 .. 2145289 - -12.2  -5.20333   CATTCATAACAAAAA         GGCCGGGCAGCT TAA ACCTGTCCGGCC         TCAGACTGCTGACAG 100 234
CLC90_RS09770 2141027 .. 2141053 -  -7.3   -5.0925   TGCCAAAATGAAAAA         GCCTGCCTC AAATCAACA GAGACAGGC         TTTATACGTTATGTT  90 65
CLC90_RS09740 2135402 .. 2135444 -  -9.3  -5.01422   CTAGATAAAAATAAA CGCTAACCGATGAAATACTG CCTG CAAGATG-CATCGGTTAGCG ATTCAAAACCGTTAT 100 37
CLC90_RS09730 2133728 .. 2133747 -  -2.2  -5.45652   ATGGGGAACAAAAAA            TAAAATCT TATC AGTTTTTA             TTCATCATTTTATTT  78 386
CLC90_RS09720 2132265 .. 2132307 -  -2.7  -3.30007   AACACTGCGGGAGAA TGCCAGTATCGCTCCGGTGG ATAT CCACCGGAAAAACACCT-CA AATATTGGCAATGCT  46 39
        thrS NONE
CLC90_RS09700 2127919 .. 2127937 -  -5.2  -2.79327   TCATTTTACGTAAAT             GCAACGTG AAA CCCGTTAC             TTGTATGCCTTACTG  50 35
CLC90_RS09695 NONE
CLC90_RS09690 2127218 .. 2127252 - -12.3  -3.71527   CTGCAATCAGGCAAA     GATTAAAAGAGGGAG ACAAG CTCCCTCTTTCATTC     TGACTTACGCCAGCG 100 30
CLC90_RS09680 NONE
CLC90_RS09675 NONE
        ihfA 2123055 .. 2123070 - -11.8   -4.5464   TACAGACAAGGAAAA              GGCCGC TTGC GCGGCC               TTTTTTTTTGTCGGA 100 45
CLC90_RS09620 2116918 .. 2116930 -  -4.1    -4.053   ACTACTGTATATAAA                CATAG TAA CCATG                TCAAACGTTATTCAA  59 50
         dcm 2115495 .. 2115510 - -11.8  -4.57516   AGACGCAAAGGAAAA              GGCCGC TTGC GCGGCC               AATATCACTTTTTAA 100 138
        btuC 2114162 .. 2114175 -  -6.7  -2.59564   TCGTTAGCTGATAAT               CAGCA TAAA TGCTG                GCTTGTTGGTAGCGG  56 149
        btuD 2113297 .. 2113320 -  -2.6  -4.90778   CCCAGTCAAAGAAAA          GATACCTTATT GGC AATA-GATATC          GGTATGAAGTTAATT  67 80
CLC90_RS09600 NONE
CLC90_RS09595 NONE
        arnA NONE
CLC90_RS09585 NONE
CLC90_RS09580 NONE
        arnE NONE
        arnF 2105500 .. 2105517 -  -4.1  -4.43669   AGGGAAAAAACGAAA             CACCAAG CTAT CTTGCTG              TATTTATCGGACTAA  66 96
CLC90_RS09565 NONE
CLC90_RS09560 NONE
CLC90_RS09555 2101965 .. 2101991 - -10.1  -4.21631   AAGTGATGGAACAAA         CCGGTTGCACC CCACT GGCGCAACGGG         ATTATCGGCAGTTAT  85 492
CLC90_RS09510 2091156 .. 2091175 -   -10  -5.59534   AAGGATAATAAAAAA            TCCGCAAC CTGC GCTGCGGA             TTTCAGAACATTCCC 100 56
CLC90_RS09495 NONE
CLC90_RS09490 2085575 .. 2085599 - -12.2  -2.91099   CAGATTAGAAAAGAT          TCGGAACCCG ATCAA CAGGTTCCGA          TAGCGTGGTCGTAGC  86 70
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS 2079858 .. 2079879 -  -5.1   -4.5187   CTGAAAAAAAGTAAA           GCCGACCAT AAAA ATAGCCAGC            TTTGATAACGATAAT  70 61
        sufE 2079220 .. 2079234 - -12.8  -3.62864   TAAAGGTAGTTGAAA               GGCGGC CAA GCCGCC               TCAGATTGCTGACAA 100 202
CLC90_RS09455 2077742 .. 2077760 - -14.6  -4.87291   TACTTCAATGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCCCGA 100 157
CLC90_RS09420 2072089 .. 2072114 - -13.4  -3.76373   GCCGCAATAGTTAAA         GGGATGCCAT TCATTC ATGGCATCCC          TGTTGCTATTTTGCT 100 114
CLC90_RS09405 2068173 .. 2068191 -  -6.7   -2.9627   TTAAGCCATCAGACA             GAAGTCG GAAAA CGACTCC             GCTGACTTCTGTCTT  58 47
        ynhF 2066660 .. 2066680 - -11.1  -4.25347   AATCACCAAGATAAA            GGGCGGATA GAT TCTCCGCCC            TTCTCACTTATCGTC 100 62
CLC90_RS09380 2064095 .. 2064114 - -12.2  -4.82901   TGCCCGTGATAAAAA            TAGGTGGC CGGA GCCACCTA             TTTTATTGTATCCAC 100 57
CLC90_RS09350 2058554 .. 2058566 -  -4.1  -2.94412   GGCAAGGTTAAATCA                TCCTG ATG CAAGA                AAATGGCCGTTAATC  47 59
CLC90_RS09345 2057124 .. 2057148 -  -5.1  -4.44608   TTTACCGAAAAATAA         CCTAT-CAGG GGAAGA CCTGAATAGG          GTTAATTTACCCACT  70 473
        slyA 2055869 .. 2055893 - -14.3  -5.47218   GCGGACGTAAAAAAA          CCGAGGCTCAC ACG ACGAGCCTCGG          TTTGTTTTCTTTTGC 100 70
CLC90_RS09325 2053800 .. 2053810 -  -8.2  -3.02144   TTAGCCTTTTTAACA                 GCGG CAA CCGC                 AGTCATCACCGATTT  65 86
CLC90_RS09315 2051550 .. 2051570 -  -9.8  -3.78953   ATCTTGACCATTAAA            TAAGGGAC CTAAT GTCCCTTA            TTTAATACACCGTTT  84 40
        pdxY 2050554 .. 2050591 - -11.3  -3.08996   TATTCTGACTGAAGA   CTGCCCGGCAATCG-GCC ACT GTCGCGATTGCCGGGAAA   AGAGTATTACAGTTT  84 32
CLC90_RS09280 NONE
        cbpM 2045190 .. 2045220 - -14.8  -2.72344   GTTTATCGTTAATCA       CCAAAGGCACCAAC CTG ACCGGTGCCTTTGG       TTTTACGATTAAACG 100 170
CLC90_RS09235 NONE
CLC90_RS09230 2034435 .. 2034469 - -10.1  -2.73334   AGCAATCATACACTA     TCCATCTGCACCTGA TGATT TCAGATGCAGATGAC     ATCCTGACGGCAACT  71 46
        pspA NONE
        pspB NONE
        pspC NONE
        pspD NONE
CLC90_RS09200 NONE
CLC90_RS09195 2028884 .. 2028923 - -15.7  -2.54723   CTGCAACAGCAAGAT  TGGCCACGTGGATGGCG AGATGA CCCCACCCCCGTGGCCA   CCATGGACATCGGCA  95 205
        tyrR 2026244 .. 2026262 - -14.6   -3.9941   GTTGGTATAATGAAA             CGGCTGAC ATT GTCAGCCG             TTATTGATTGACTCT 100 19
CLC90_RS09170 2024320 .. 2024330 -  -5.4   -3.1994   CAGATCATTGAGGAA                 TTGG CGC CCAA                 CTGGGTGGTTTCTTT  52 289
CLC90_RS09160 2021873 .. 2021901 - -10.3  -2.97408   CCGGAGCGAAATAAG        CGACAGAGCTGGA TTT TTCAGCCCTGTCA        TAACCGATTTAATGT  76 34
        zntB 2020586 .. 2020610 - -12.2  -5.64274   TGATGGATAAAAAAA          TGCCGGTGTC TATTC AACACCGGCA          TCGTAACAATTAATG 100 226
        ttcA 2019428 .. 2019467 -  -6.6   -2.7263   ATGATGTGCTGAAAT  CGATAAAGTGATCAGTCA GTGA TTATTGATCACTTTATCT   TTTTGGTACTAAAAA  56 41
CLC90_RS09140 2014857 .. 2014869 -  -7.7  -2.82623   CTGTTGCCAGAATCA                GTACC GCC GGTAC                TAGTGACATTACAGA  59 252
CLC90_RS09130 2013507 .. 2013517 -  -6.8   -3.4158   CCGAAAAATCAGCAA                 GGCA ATA TGCC                 GAACATTGAGTTCGG  59 363
CLC90_RS09115 2008920 .. 2008934 -  -2.8  -2.98582   ACAACATCCAGAAAT               GAAAAG ACG CTTTGC               TACTGACTTCGAGTC  43 241
CLC90_RS09105 NONE
CLC90_RS09100 2007276 .. 2007287 -  -5.8  -3.33009   GAAAATGGCCCAGAA                GGTC TGGT GACC                 GGCAAACGTGCAATT  57 409
        hrpA 2002696 .. 2002725 - -12.2  -4.56775   ACGTCTGGCTAAAAA       TCACCGCGTAGC GAATAG ACCACGCGGTGA        ACCGTTCTGGTTTAC 100 37
CLC90_RS09075 NONE
CLC90_RS09070 1999124 .. 1999137 -  -2.3  -4.68528   AAAGGGAAAAAATAA               TGTGC TATG GCACT                TCTATTTTGTGCTGA  63 198
CLC90_RS09065 1998243 .. 1998266 -  -7.6  -3.17325   ATTTTTCAGAATATA          GTTATGATCA GAAA TAATCATAAC           CTACCTTTCATTTTT  63 190
CLC90_RS09060 1997642 .. 1997664 -  -5.5  -3.60627   TCACCTTACCTTAAA           CCACTCAGC TGCTC ACTGTGTGG           TTCCAACGATGCTGA  59 59
CLC90_RS09045 1994666 .. 1994677 -    -3  -3.92324   TTCGGCAAGACTAAA                TAAC CGAT GTTA                 TTACCAATGAAATTA  56 166
        pntA NONE
CLC90_RS09025 1988150 .. 1988168 - -14.6  -2.62263   ATCGGCTTGATATCA             GGGCCAGT TTG ACTGGCCC             GTTCTTCCGCCTAAA 100 44
        ulaR 1982257 .. 1982271 -  -3.6  -2.96274   TTGCTCATAATCAGA               CCTTTA GGA TAAAGA               AATCAGACCAAAATG  46 28
CLC90_RS08990 1981129 .. 1981158 -   -10  -4.27297   AATAGAACAGATAAA       GCAGACGAGGAA TTAACT TCCCGCGTCTGC        GCACCATCAATGTCC  93 49
        sbmC 1977486 .. 1977511 -  -2.5  -3.78953   AGGTTTACGATCAAA         GTCGTGCG-GGT AAA ACCACGGATGAC         TTTGGTGGCCCCCAT  52 40
CLC90_RS08965 1974748 .. 1974764 -  -4.4  -4.83615   TATCCGTTATAAAAA              CAACCG CTAGC CGGTTA              CCGACCTCAGAAACC  71 43
CLC90_RS08960 1973952 .. 1973962 -  -6.8  -3.08015   TTAATCAGGCTAATA                 GCAG TTG CTGC                 AATTCAGACAAAGAA  59 4
CLC90_RS08950 1972308 .. 1972324 -  -2.3  -3.06815   ATTGTCCGCAATAGA              TATATCA GGT TGATTTA              GCACCAGAAATAGAA  42 23
CLC90_RS08945 1970827 .. 1970850 - -13.9  -4.09685   CTTCATGCTCCAAAA          GGAGCCAGC CGAAAC GCTGGCTCC           TTACCTATTTTAACG 100 41
CLC90_RS08940 1969725 .. 1969738 -  -3.8  -3.10134   AAACCAGCTGAAAAT               TGGG GTTCTG CCCA                GCGTCTGACACGGTT  48 334
CLC90_RS08920 1960771 .. 1960783 -    -2   -4.0056   ACAAAGAGCGAGAAA                TTGA GCTAA TCAA                CAAGTATAACTCTTT  55 505
CLC90_RS08900 1957122 .. 1957137 -    -4  -4.27001   TAATAAAAAATAGAA              TTGATG CTGG CACCAA               AAAACACGGGTGCCA  63 175
        ydfG 1956022 .. 1956036 -  -2.8  -3.04122   CTCCACCAGAAATCA               CAAAAC CGC GGTTTG               TCAGCAGCCTGAGCG  43 69
CLC90_RS08885 1954940 .. 1954954 -  -4.3  -3.84825   CTTATGTAGAGTAAA               TAGGT TATAT ACCTA               ATAAACCGTTCAGCC  57 84
CLC90_RS08880 1954622 .. 1954638 -  -5.8  -5.59534   AAGGATAAGAAAAAA              GGCACC ACCTG GATGCC              TGAAATCGGAAATCA  95 57
        clcB 1952915 .. 1952930 -  -6.8  -2.77899   CGGTTGTATTAATCA              CGCGAT ATTA ACCGCG               CAGGCAATTATTAAC  54 266
         tus 1949084 .. 1949102 -  -7.4  -3.67877   ATGTGGCAATAAATA             TTGGCGGA GCC TCCGGCAA             CTTTGAACTGAATGT  67 507
CLC90_RS08850 1946330 .. 1946343 -  -3.7  -3.79906   TCACGGGCACAATAA               CGCCC CAAA GCGCG                CTATTGTGAAGGTAA  56 87
CLC90_RS08845 1944705 .. 1944726 - -10.9  -5.73339   ATAACGATAAAAAAA           GCCAGTCAC TTTT ATGACTGGC            TTGTTAATGTAACGA 100 49
CLC90_RS08840 1943466 .. 1943490 -  -8.6  -4.25104   TTGCCGTGACTAAAA          CAGGATCGGA TAATT TACGATCCTG          TTTTAGCTATTGGTT  82 67
CLC90_RS08820 1937745 .. 1937763 -  -8.1  -4.00066   TTCATAATTCATAAA             TGGCCGA ATAAA CCGGCCA             GCAGGGTATTAGCTT  74 34
CLC90_RS08815 1937171 .. 1937196 -    -9  -5.55855   CCTAAAAAAATAAAA         GCCGCCTATT ATCCAA AATTGGCGGC          CGAACGACAACAGAT 100 99
        rsxA NONE
        rsxB 1935949 .. 1935962 -  -4.5  -3.89435   GGTAAATAACTTAAA               CATGG TGCT CCACG                TCGATCAATTTCACT  59 7
        rsxC 1933789 .. 1933816 - -12.8  -2.78384   TTCGTCGCCATGATA        TTCACCACCCTG ATAG CAGGGCGGTAAA         TGGGAACTCATAGCC  91 40
        rsxD NONE
        rsxG NONE
CLC90_RS08780 NONE
CLC90_RS08775 1929108 .. 1929124 -  -4.4  -4.05678   CCCCTAAATAAAACA              GGACAT ACGGG ATGCCC              ACGATAAGCCAAATA  59 176
CLC90_RS08770 1927005 .. 1927033 -  -8.3  -5.84432   TATAACACAAAAAAA       CCGTG-AGATAG TTGGGG CTATCTGCACGG        TTTTTTGACAATTTA 100 50
CLC90_RS08765 1924752 .. 1924774 - -11.3  -4.66938   ACGTCGAAGACAAAA           CGCCTCACG GACAA CATGAGGCG           TTACGGTGTCACTTG 100 127
        osmB 1922939 .. 1922949 -  -4.6  -2.77235   CCAATCACCCAATCA                 GCCG ATC CAGC                 GCAAACCCTGCGTGA  47 485
CLC90_RS08740 1921546 .. 1921561 -  -6.1  -4.75776   AAGCGAATGCAAAAA              GAGCG ACCAAG CGCTC               TTTTTGTTGATGCCT  80 84
CLC90_RS08735 1920985 .. 1920999 -   -10  -3.86015   TATCGTTGCCATAAA               TGCGGT TTT ACCGCA               CATTCATTGTATTGG  79 166
        ribA 1917638 .. 1917655 -  -8.3  -4.42639   ACACTGTAACGAAAA             GGGTGGG CTGG CCCCCCC              TTTTTTGCTGACAGA  87 55
CLC90_RS08700 1913220 .. 1913230 -  -6.8  -3.41581   TAACGGATGAATTAA                 TCGC CAA GCGA                 TCTGTTTAGCAATTT  63 109
CLC90_RS08675 1907387 .. 1907408 - -11.5   -4.4768   TATTAATAGAAGAAA           GCAGGGGGC TGAT GCCCCCTGT            TATTTTATGACGCTC 100 79
CLC90_RS08665 NONE
        cobO 1904246 .. 1904263 -  -6.9  -3.92075   AGCTGGATGTAGAAA             CCGTCAG CAAA CTGCCGG              TTGAAAAAGATCGTC  66 339
CLC90_RS08650 1901765 .. 1901779 -   -10  -2.84794   TGAATTGCAGAACTA               TGCCAC TCA GTGGCA               ATGGCTTTATAATAA  68 284
CLC90_RS08640 1899235 .. 1899260 -    -4  -5.12068   TACAGGCAACAAAAA         GGCTCAC-CGA TTAAC TAGAGTGAGCC         TCTTCTATTAGATTC  78 232
CLC90_RS08625 NONE
CLC90_RS08620 NONE
        trpD NONE
        trpF 1892413 .. 1892423 -  -5.4  -3.14344   TATCGGGTTCACCAA                 TAGC AAA GCTA                 TTCTGATTAATACGC  53 32
        trpB NONE
CLC90_RS08600 1890307 .. 1890335 - -10.2   -5.2189   CGAATCAGGAAAAAA        CCGCGCCGGAGT GATTG AGTCGGGCGCGG        TGACGTGTCTGCGTG 100 67
CLC90_RS08595 1889693 .. 1889717 -  -7.8   -5.0133   TATCTGGTTAAAAAA          GAGGAGGCGC ATTAG ACGCCTCCTT          TATTTATTGTTGACG  95 66
CLC90_RS08585 NONE
CLC90_RS08580 1887401 .. 1887421 -  -3.3  -2.79694   TAGAAGAGCCAAGCA           TGGTACGG AAGCCG CCG-ACCA            GGACGAATCCACGAC  43 101
CLC90_RS08570 1884827 .. 1884847 -  -3.9  -2.83822   TTCACGCCATAATGA            GTCGCCC TGAAGGT GGGCGAG            TATCAAATCAATCCT  45 33
        yciA 1884303 .. 1884330 -   -15  -5.14563   TCGGTTATTAAAAAA        GGGTCGCATGTGA ATT TCAC-TGCGACCC        TTTTACATTTGTCAC 100 57
CLC90_RS08525 NONE
CLC90_RS08520 1874562 .. 1874574 -  -3.4  -2.59564   GTTTGATTTGATAAC                GGAT TAGTG ATCC                TATTTATCGTCAGTA  42 25
CLC90_RS08510 NONE
CLC90_RS08505 1872556 .. 1872567 -  -2.2  -4.19817   GCGAGCGAGTCAAAA                CGCA TGGG TACG                 CATTGCAGACGGCTT  55 56
         cls NONE
CLC90_RS08485 1868710 .. 1868735 - -11.1  -5.09426   TTTAATGGCAAAAAA         GCCCCGCCATT TTGC ACTGGCAGGGC          TTTTTTCTTATTTTT 100 82
CLC90_RS08445 1859250 .. 1859263 -  -4.5  -4.00042   TCTTTTAGTAAATAA               GCTGC TGAA GCAAC                TAGTATAGACAGGCT  61 408
CLC90_RS08435 1856454 .. 1856484 - -19.9  -5.01422   GGACACAAAAAGAAA       CCCCCTCAATCAG GAAGG CTGATTGAGGGGG       TGGATAATCTACCTA 100 79
CLC90_RS08425 1854422 .. 1854445 -  -5.2   -5.4756   AAGCTTAATAAAAAA          TACCCTCAAC ATAA GAAGAGGGTA           TTTCTCGGATAATAG  87 58
CLC90_RS08405 1848806 .. 1848820 -  -4.2  -2.60392   TATTGCGTAATTAAT               GGCG TTTTACG CGCC               GATTATCCGCAACAT  45 28
        purU 1847871 .. 1847890 -  -2.2  -3.53091   AGGTGTTTCTTCAAA            CAAAAAAT AACG ATTTATTG             AGCAGTTACAGAATG  47 31
CLC90_RS08395 NONE
CLC90_RS08390 NONE
CLC90_RS08385 1847008 .. 1847028 -  -5.6  -4.23298   GAAATTGAAAAAATA            TGTATTAA CACCT TTAATACA            ACTCCTCGCAGGGGG  68 309
CLC90_RS08375 1844807 .. 1844831 -  -4.4  -2.78715   AAGTGGGGGATCATA          CGTCTAAT GGCTAAAAA ATTAGACG          TGTTCAATACGACTT  46 55
CLC90_RS08370 1843886 .. 1843922 -  -7.9  -3.03159   CGAAGTTTGTCAACA    GTCTGAGCCCGTGCTGT TTT ACAGCGAGAACTCCGAC    CACACCGGCGCATGA  62 7
CLC90_RS08365 1842779 .. 1842796 -  -7.7  -3.06183   CGCACTGGGAGTCAA             CGCTGAC CCAA ATCAGCG              AAAAAAACTGCCGCT  60 454
        sppA 1837151 .. 1837168 - -10.5  -5.84381   GGACGAATAAAAAAA             GCCCGAC GGGT GCCGGGC              GGGATATTTATCTAT 100 56
CLC90_RS08335 NONE
CLC90_RS08330 1835372 .. 1835389 - -11.3  -3.58343   GTTATTACCGTTAAA             CCGAGCT AATT AGCTCGG              TTTTCGTGGTATCCC  90 49
CLC90_RS08315 1833050 .. 1833063 -  -9.5  -6.02919   GCAGAAATAAAAAAA               CCGCC CGGA GGCGG                TTTTTACTGATTTCT 100 52
CLC90_RS08310 1831680 .. 1831698 -  -3.2  -4.70772   ATACACCGAATAAAA             TCATTAAA GTA TTTAATGG             TTCGGATATGGTGGA  69 328
CLC90_RS08290 1826460 .. 1826484 -  -3.6  -3.64682   CAGTAAATCGGCAAA         CGGGTTATGAA GATT TTCTTA-CCCG          CAGATACCATTCACA  53 5
CLC90_RS08285 1824925 .. 1824942 -  -7.7  -4.77759   AGAACCCACTAAAAA             CCGACTA ACAT CAGTCGG              TTTTTTATTAGGCAG  91 46
CLC90_RS08270 1820888 .. 1820898 -  -5.4  -4.99972   ATAAAATAGGAAAAA                 TGAC AAA GTCA                 TTAAATTGAGAGAAG  78 426
CLC90_RS08265 1818007 .. 1818051 -    -4  -3.92542   GGTAGTGGTAAATAA TTTCAATGCTAATTAATTA TCCATTTT CAATTAATC-GCATTGAAA GGCGAGCCTCCAGTG  59 166
CLC90_RS08260 1817315 .. 1817333 -  -8.2   -2.5937   ATAGATTGCTACAAC             CTAGATTG CTA CAACCTAG             ATTGCTATGGCCTAG  63 257
CLC90_RS08255 1815967 .. 1816001 -  -3.5  -2.83071   AACTGAGATGGAAAG    TG-TTAATGCTGGCCG CAAC CGGCCAGCGAAAATCA     GGCAATCTTATTGAT  45 23
CLC90_RS08240 1811268 .. 1811282 - -12.8  -4.36595   CAGTTAAACGCAAAA               GGGGCC GTT GGCCCC               TAGAGGTTAATGACA 100 227
        nhaB 1808628 .. 1808646 -  -3.2  -3.50877   TTAGCGGATAAAAAT             TCATCT TTAATTC AGATGA             TGGCATTCTCAGCCA  49 88
        dsbB 1807901 .. 1807955 - -21.3  -3.05963   AGTTTGACGGTAATA TTA-TTCTGAAAATGATAAAGGTGCC ATTT GGCACCTTTATCATTTTCAGAACTCA CCGTTTCTTATCGAT 100 33
        minC NONE
        minD NONE
        minE 1802646 .. 1802683 - -12.2  -2.81072   TCCAGCCAATAGAAT   TCAAGCATCCCCTGTA AATAAA TACAGGGAATGTTTGA    TATGCCGATATCATT  83 36
CLC90_RS08155 1795143 .. 1795156 -  -4.5  -4.30576   TGGTTATGATCAAAA               TGGCA TAAC CGCCA                ACAGACAGAAAGCGC  66 185
CLC90_RS08130 NONE
         pyk 1788504 .. 1788548 - -12.4  -3.87869   TTAATGGTGTATAAA TAAAGAAAAAGCCAGTCAAC TTCTC GCTGACTGGCTTTTTTATTA GCGATGAAAAGTTAT 100 37
        znuC NONE
        znuB 1783346 .. 1783372 -  -8.7  -4.60797   CGCGGATAGACAAAA         CAACGGGAGCC TTTTC AGCCCCCATTG         CACAACATTAACCTT 100 33
        dtpB 1781466 .. 1781495 - -10.7  -2.88249   TACAGCGGTGATATA       GCGCGGAGCCAAG CAAT CTTGACTCCGCAT        TATTTACCCTTTATT  77 66
CLC90_RS08055 1774177 .. 1774196 -  -4.2  -2.76171   CGGAATAATGATAAC            CGTCAATG TCGA CACTGTCG             CTAGAAAAATAGCAG  46 220
CLC90_RS08050 1773659 .. 1773675 -  -9.4  -3.38786   GAGAGGCAACATGAA              GGCGGT GATAA ACCGCC              CTAACTAACTGTTGT  74 87
        cmoA NONE
        cmoB 1771702 .. 1771729 - -14.2  -3.49475   CTCAGCCTGATATAA        CCAGCCCCGAAA ATGT TTCCGGGGCTGA         TTTACCGCCAGCAAC 100 46
CLC90_RS08025 1767845 .. 1767858 -  -9.5  -5.66229   AGTAATAATAAAAAA               GGCCC GTTA GGGCC                TTCAGACTGCGGACA 100 243
        mdtH 1755048 .. 1755061 -  -2.3    -2.702   ATTATGTCAGACAAC               GGGCA ATAG TGCCT                CTGTAGCGAATTTCG  40 54
CLC90_RS07980 NONE
CLC90_RS07975 1753907 .. 1753929 - -15.6  -3.04322   GCTAATGTCTGAATA           TAGCCCGCCA TTT CGGCGGGCTA           TCGTTTTAGTCGGTA 100 31
CLC90_RS07950 1749035 .. 1749047 -  -7.7  -3.15579   TTAATGGTGTATTAA                GCCAT AGG ATGGC                TTGGCTGTTTTAGCA  63 283
CLC90_RS07945 1748078 .. 1748090 -  -4.8   -3.5362   CAATTTGCAGAAATA                CCCT GCAAT AGGG                TGTTATTTTTGCCAG  55 28
CLC90_RS07940 1747827 .. 1747859 - -25.1  -4.07568   TGCTTGGCGGCAAAA      GCAAAAGGCTCCGAC GTT GTCGGAGCCTTTTGC      TCGAATATGGCGGTG 100 33
        dauA 1744361 .. 1744389 -   -11   -5.4477   AAACGGGTAAAAAAA        GGGCGATGTAGT GAAAT ACTACGCCGCCC        TTTTTTCATGCTCTG 100 44
        lolB NONE
CLC90_RS07890 NONE
CLC90_RS07885 1736038 .. 1736062 - -10.8  -3.59315   GCAACCATCGGCAAA         CT-TGCAGCGC CAAG GCGCTGCAGAG          AGTGATTAATGCTCA  84 31
CLC90_RS07875 1734615 .. 1734651 -  -8.2  -2.72839   AATTATTGGCAATGA   TGACCGATTCTCCGGC TATTGGT GCCGGAGAATC-G-CA   ATTTAGGCGTTGGCT  63 28
        ychF 1732696 .. 1732713 - -11.3  -5.15526   ATATAAAAGGAAAAA             TCCACGC AATT GCGTGGA              TTTTAAAGAGTTTTA 100 88
CLC90_RS07800 1718324 .. 1718343 -    -5  -3.11281   GTACTTAAAATGACA            TTTCGACA TTTA TGTCGGAA             TTGGTTTCAGTCGAT  51 95
CLC90_RS07795 NONE
CLC90_RS07790 NONE
        hycD 1714788 .. 1714802 -  -2.1  -3.95873   GCGGGATAAAAAAAG              GTCAGG TCAG CCTG-C               GACCAGCCAGGATAC  53 17
CLC90_RS07780 1713003 .. 1713020 -  -2.7  -2.71364   GCACTTTTTTAATCA             GCTTTAT CATG ATGAAGC              GTTCCTTAAAGTGGC  41 31
CLC90_RS07775 NONE
        nuoB NONE
        hycH NONE
        hycI NONE
        hydN NONE
CLC90_RS07750 1707681 .. 1707691 -  -5.4  -3.46068   GCGCGAATCCAAACA                 CATG ACT CATG                 TCAGCACTTACTGAC  57 115
        hypF NONE
CLC90_RS07740 1704153 .. 1704190 - -11.9  -4.16016   TGATGGCTGAATAAA   TCGCGATCCGGTGGCTG ATTC CTACCACCGGATCGCTG    GATAGGTAAACAAGA 100 91
CLC90_RS07735 1703054 .. 1703068 -    -2  -3.44334   GGAAATTAATAGTAA               TCGCCG TGG CGGTAA               TCCCAGGTAGTGAAA  47 1
CLC90_RS07730 1701531 .. 1701544 -  -5.9  -2.63702   CTATCGAACAAAATG               GGCCA TTTT CGGCC                TTCCCGGGTGTTGAT  51 488
        hutC NONE
CLC90_RS07710 NONE
        hutG 1696883 .. 1696927 - -12.4  -3.53012   TTTCTGTGTCGGAAA TTGGTGCAT-AAAAAGCGGGG ATAT CCCCGCTTTTTTATCCACTAA AATTCGTGAAATACA 100 43
CLC90_RS07665 NONE
        cydB 1683851 .. 1683875 -  -6.3  -3.28368   ACTCAAGCGAGAAGA          TGTGGGCTGGC ATC ACCAGCCCGTA          GAAAATCAGTGATAG  59 31
CLC90_RS07655 NONE
        narX NONE
CLC90_RS07645 1680761 .. 1680785 - -12.3  -2.76189   CAACTCATTTAAGGA          TGGACATATCA GGG CGATATGTCCA          AGACCGGGCAGAAAT  89 53
        chaA 1679428 .. 1679448 - -12.6   -4.2237   AAATTAATGCCAAAA            GGGCAAGC GCTAT GCTTGCCC            TTGTCTATCCAAACG 100 50
CLC90_RS07625 1675634 .. 1675645 -  -4.4  -3.91412   ATGACAGGCGATAAA                TGTG GTGT CACA                 CGCGATTATTTGCAC  59 62
        dcuS NONE
        dcuR 1661421 .. 1661442 - -11.5  -3.15579   TGAACGCTGTAGGAA           TCCTCGCCC TTTA GGGCGGGGA            GGATGTCAACTGAAT  84 322
        tnpA 1659720 .. 1659737 -  -8.3  -2.71924   CAGTGTGCCGTAAAG             CCCGTCC TTCA GGGCGGG              GATATAAGGCACGGT  63 48
CLC90_RS07555 1657175 .. 1657198 -  -3.2  -3.53811   TTCATTTTTTTTAAA          TGTTAGTTTA CTTG TAAGCCAACA           CCAATGACACTTTTC  49 472
CLC90_RS07535 1651489 .. 1651511 -  -8.6  -3.41962   GGTTAACACATAACA           TACTCTCATT AAG AATGAGAATA           CTATTTTCGCAAGCT  71 411
CLC90_RS07530 1650112 .. 1650124 -  -7.7  -3.70863   GATACATCAGGCAAA                GGGAT TTT ATCCC                CGAGAGAAAATGAAG  68 200
        rluE NONE
CLC90_RS07510 1646277 .. 1646293 -  -5.1  -4.41348   TGCGCGGCAAACAAA              GCATGAT AAA ATCAAGC              GCCGGATTTTATCAC  70 110
        mnmA NONE
        hflD NONE
CLC90_RS07495 1643013 .. 1643035 - -13.4  -2.75844   CTGGGCAGGTGAAAG           GCAGGCGGAA AAA TACCGCCTGC           GGATAATGCTTATTT  93 35
CLC90_RS07490 1642230 .. 1642240 -    -4   -2.9162   GAACCGGGTAAAGTA                 TTAC CCG GTAA                 AATAAGGGCGAAATT  47 47
        phoP NONE
        phoQ NONE
CLC90_RS07475 1638703 .. 1638729 - -12.2   -5.7946   GCTTCAACAAAAAAA         CGCCCCTAAGGT AAA ACCAAAGGGGCG         TAGTTATTTCTATAT 100 56
CLC90_RS07440 NONE
CLC90_RS07435 1628500 .. 1628513 -  -6.7  -3.94877   ACTTTCTAATAATAA               TGGCT GCCT AGCCA                TGCTATGGCTAGGCC  69 69
CLC90_RS07320 1608197 .. 1608219 -   -12  -3.36965   CAAAATAATCATCAA           TCGGCGTGGT TTT AACACGCCGA           CGTTCAACTATGATT  89 115
CLC90_RS07305 1603132 .. 1603164 - -16.3  -5.13722   GGCAGGAAAAGAAAA      GGCCTGAGTTCTGTG AAG CACAGCGCTCAGGCC      ATATTAGTCACTCTA 100 71
CLC90_RS07290 1599550 .. 1599570 -  -9.8  -3.46534   GAATTGCAGGAAATA            GGGAAGAA ATGCG TTCTTCCC            GTGGAGAATACTTAA  78 37
CLC90_RS07285 1599182 .. 1599202 - -12.5  -5.28315   ATAAAAGGCAAAAAA            GCCGAGGAG CGA CCCCCCGGC            AAAAACAGCATGACA 100 46
        bssS 1598603 .. 1598629 - -10.3  -5.07486   GAGGGCGAATAAAAA        GGCACCGAATGA GGAG TCATT-GGTGCC         TAAAGTTTTTACCCT 100 49
CLC90_RS07275 1597230 .. 1597242 -  -2.7  -4.18782   ATAAATTAAACTAAA                TGTCA GGA TAACA                TCTCCCATGACATCC  57 90
CLC90_RS07270 1596406 .. 1596420 -  -4.3  -3.57119   TAGATAGTGTGTAAA               GATAG TTTGC CTATC               TGACCCTTTTCTGGC  52 66
CLC90_RS07265 1595886 .. 1595898 -  -5.5  -3.23541   ACAAAGAAGTCAATA                TCCCG CCG CAGGA                GGATCAACTATAGAC  53 30
        lpxL 1592053 .. 1592065 -  -7.7  -2.61264   TGGCTGATTGACAAC                CCTTG TAG CAAGG                TTTTTGTTTGTAGAC  60 116
CLC90_RS07245 1591514 .. 1591529 -  -4.8  -2.66321   TTCAGTAAAAGAGAG              TAAAAC GTCG GTTTTA               GGCGAATTGGGCAGG  48 204
CLC90_RS07240 1589541 .. 1589562 -  -5.1  -5.67967   ACGAGCATAAAAAAA           GCCAACC TAACATCG GGCTGGC            TATTTTTCCGCATCA  91 48
        tnpA 1587770 .. 1587784 -  -4.9  -2.71924   CAGTGTGCCGTAAAG               CCCCG TCCTT CAGGG               TGGGGATATAAGGCA  48 52
        mdoC 1581467 .. 1581484 -  -6.3  -3.21099   GCTTCTCAGTACCAA             TGCCCAGT TTA AC-GGGCA             TACAGTGAGTGTTTT  57 113
CLC90_RS07205 1581115 .. 1581126 -  -3.6  -2.85545   GCGGGAAGAATACGA                GGGC ATTC ACCC                 ACACCACCCATGACG  45 66
CLC90_RS07200 1579141 .. 1579167 -  -9.5  -2.58544   GGCGATTGGGAGAAT         CCACAGGCA GAGTGCAAT TGCCTGTGG         CAGAGATTAGGCTTT  68 32
CLC90_RS07195 1577692 .. 1577716 -  -2.8  -4.08692   CAACGGTCTTGAAAA         CCGTCG-ACGG GAAA CCGTTCGAGAG          TTCGAATCTCTCCTC  57 389
        tusE 1577035 .. 1577058 -  -8.9  -3.73402   AGATTCGTTATTAAA          CCGACTGGCC GCAGG GGCCAGT-GG          TAGTATGGGAATAAT  75 45
        rlmI 1575218 .. 1575243 - -11.9  -3.01831   TCCTGAAAAACATTA         CACTGCCTTCA TATA TGAGGGCAGTG          CAGAACATTTCAAGT  86 40
        hspQ 1574826 .. 1574843 -  -4.8   -5.9003   AAACCAATAAAAAAA             CCTGAC GCCAAA GCCAGG              TTTTTCCGCGGTATT  95 60
CLC90_RS07160 1573196 .. 1573212 -  -9.5   -2.7535   TTTCCCAACAGATTA              CTGAAAC TGG GTTTCAG              TTCATAGCGGTAACG  70 101
CLC90_RS07155 1572611 .. 1572625 -  -4.2  -4.04474   ACACTGGGACATAAA               CTTACC CGA GGTGAG               CTAGACTCTGGTCTG  59 98
CLC90_RS07145 NONE
        yccS 1567535 .. 1567562 -  -8.4   -3.2534   AGTATGATAATTGAA        TTCGGACCGGAT TTTG AACCAGCCCGAA         TGGAGGATTAACCCT  69 33
        sulA 1565840 .. 1565852 -  -6.3  -2.80438   CCAAATAGGCAATGA                GCTTT TAT AAAGC                CAAGCCCTTGGTTAA  55 340
        ompA 1564704 .. 1564718 - -12.8  -6.15828   GGCAGCAAAAAAAAA               CCCCGC AAA GCGGGG               TTTTTTATGAAGAAG 100 46
CLC90_RS07115 1562201 .. 1562216 -    -9  -2.62933   GAAGGTCGCAGATTA              GCGTAC ACTT GTACGC               TGAACAAGTCCGATC  66 39
CLC90_RS07110 1561367 .. 1561385 - -11.7  -3.49777   TTCGACAGAGGATAA             CCTCCGC TTTAG GCGGAGG             TTTTCATTTCGGGCA  89 283
CLC90_RS07075 1551935 .. 1551948 -  -3.9  -4.55295   GCCGTTAGAAATAAA               GAATA CGGA TATTC                AAGCTTTCGATCGGG  65 97
        pncB 1545353 .. 1545379 -  -9.4   -3.3879   AAGGTATGGGAAAGA         GACCGGGAGA GGGAAAT TCGCCCGGTC         TGAATATGGCTAACT  74 35
CLC90_RS07050 1543676 .. 1543691 - -10.4  -4.76171   TAAAAAATGACAAAA              GCCAGC ATGC GCTGGC               TTTTTTTTATACAAC 100 69
CLC90_RS07045 1542274 .. 1542293 - -11.4  -4.29845   CAACCCAATGCAAAA            GGCAGAGC CGAA GCCCTGCC             TTTTTTACTTACGCC 100 68
CLC90_RS07040 1540732 .. 1540760 -   -11  -3.26717   AGGTAGAGAAGTCAA       GCG-TCCGCGCCA GGGA TGGCGCGGAACGA        GCCGACAAGGACGTA  81 145
        elyC 1528411 .. 1528446 -  -4.6  -2.72463   ATTCACCGTTAATCA    CACGGGA-CGATCGCGC GGT GCTTTACCGTTCCCGTG    CTTGCTTATCCCAGT  46 413
CLC90_RS06970 1523742 .. 1523779 -    -5  -3.17194   ATTTGCTCAACCGAA  CTGGTGGTA-TT-TACCG GTAA CGGCAGAATTCCCACCAG   AACAGGCTGAGCAAT  50 83
CLC90_RS06920 1509525 .. 1509546 - -12.3  -4.91712   CTGAATCGATAAAAA           CAGCGATCC GTTA GGATCGCCG            TGGGTGTCAGATAAA 100 64
        focA 1508191 .. 1508201 -  -2.4  -2.90496   TTTCTTCGTAAACCA                 GACG TAG CGGC                 CACACTTTAGTGTTG  42 32
        pflB 1505690 .. 1505717 -   -15  -2.57344   GATGGTTTTGATAAG        TAAAGGCCCCAC AGTC GTGGAGCCTTTA         AGTTTATACCCTTAG 100 177
CLC90_RS06905 1504655 .. 1504683 - -11.7   -5.0133   CAGCGGTGTAAAAAA        CCGCCAGTCTG TACAGGT CAGCCTGGCGG        GATAAGACGGTAATC 100 39
CLC90_RS06870 1493646 .. 1493671 - -11.9  -4.25538   AATAACAAATAAGAA         GGCGGCC-AACC TGA GGTTAAGCCGCC         AGTAAAAATGGCCGA 100 79
        cydD NONE
        cydC 1489667 .. 1489688 -  -5.1  -3.36327   GTAGGGTATTGATAA           TGCCGCC GTTGTTCT AGCGGCA            TTCGATAACATTAGC  55 52
CLC90_RS06855 1488816 .. 1488832 -  -2.2  -3.98075   ACATTATGTAAAGAA              GTGTTG GCAGT CATCAC              ACCATTTCTGCAAAA  53 98
CLC90_RS06850 1488441 .. 1488467 -  -7.9  -4.99665   CAAAAAAAAGCAAAA         CGCCCTAGCCA ATAAA TGGTAAGGGCG         TCGGAGGGGGACTAC  95 81
        cspD 1485015 .. 1485037 -  -9.1  -5.69262   GTATAAAAACAAAAA           TGCCAGTCG AATAG CGGCTGGCA           TTTTGAATCGCAGTG 100 50
CLC90_RS06820 1480407 .. 1480424 -  -4.1   -4.0371   TATGGCGGATAGAAA             TCGCG AAAGTGAG CGCGA              CCGTCTCACCATGCT  60 187
CLC90_RS06810 1477860 .. 1477890 - -17.8  -3.21747   GCACTTTATCATGAA       TCTCAGTGGGTTAT AAA ACAACCCACTGAGA       TTAAATCAAGAGAAG 100 31
CLC90_RS06805 1475926 .. 1475947 - -17.3  -4.25104   TGGTGTCGAGTAAAA           GCGGCCAGC AGGT GCTGGCCGC            ATGACCTTTTAGGCC 100 34
CLC90_RS06800 1474809 .. 1474835 - -13.7  -2.77135   GTTGATAAATAATAT         CTGGCAGGGAG AATCG CACCCTGCCAG         TATTGGTTGCTTCAT  93 82
CLC90_RS06795 1473478 .. 1473494 -  -3.7  -3.18657   TCAAACAGCGAAAAT              CATTACT TTC AGTTATG              TGCAGCAAGAAACTC  48 17
CLC90_RS06790 1471801 .. 1471816 -    -4  -3.44622   TACCTTCATAACGAA              TTCGGT TCCC ACCAAA               AATCAGAGTGCTGCG  52 158
CLC90_RS06785 1470736 .. 1470785 -  -7.9  -3.60475   AAGTGTCACGTTAAA GGCC-GCGGGTGCAGCGGGTAGA GAGGAT TCCA-CCGCTGCACCAACCGGTC AGAAGCCGCGCAGTT  70 24
CLC90_RS06775 NONE
        artP 1468668 .. 1468680 -  -2.7   -3.2632   AAATTCCCAAATAGA                TATCA ATG TGACA                GATAGCTGGCAAAAG  46 15
CLC90_RS06765 NONE
        artQ NONE
        artM 1466475 .. 1466500 - -15.5  -3.14218   CATTCACCAAAATTA         GAAACCCCGGC AGAT ACCGGGGTTTC          AGAGCAGGCATGATT 100 47
CLC90_RS06750 1465341 .. 1465377 - -12.3  -2.80195   AGCCACTACGAAGTA    CTGACGCTGTTAGTGCG ACG CGAACTGACAGCGTAAG    CGTTTATCCATTAAA  89 102
CLC90_RS06705 1457484 .. 1457499 - -10.4  -4.62783   CATCGAGGTGAAAAA              GGGTGC AGAA GCACCC               TCTATTCATCTCGTC 100 75
CLC90_RS06700 1455479 .. 1455493 -  -4.3  -4.41348   TTTTCGCGAAATAAA               TTAGG GTTAT CCTAA               AATCCCCGGCCAGAT  66 17
CLC90_RS06695 NONE
CLC90_RS06690 1453717 .. 1453739 - -14.2  -2.56596   TTTCGCAGGAAGCGA           CACCGACAGA GAA TCTGCCGGTG           AGAGGATGGCCGAAA  93 42
CLC90_RS06685 1452816 .. 1452831 - -11.8  -4.21141   TCCCAATAAAGTAAA              CCCGGC CTTA GCCGGG               TTAATAATCATTTAG 100 37
        deoR 1451659 .. 1451680 -    -3   -3.7347   CTGAACATTTAATAA           GCAGTTCT AAAAAG AGAAGTGC            TTTTTTTATAAGCAA  51 374
CLC90_RS06675 1449403 .. 1449422 - -11.4  -3.40522   ACCGTGGTAGTAGAA            GCCGGTAC GATC GCACCGGC             TTTTGATGCATTAAT  86 104
CLC90_RS06670 1447897 .. 1447922 - -14.7  -3.89354   TCGTTAAATGAACAA         CAGGGCCGTTG ATAA CTACGGCCCTG          TTTTATTTCAGTTTG 100 73
CLC90_RS06660 1444909 .. 1444921 -  -9.1  -3.72621   TGAAATATAAATTAA                GCCAG AGC CTGGC                GGCGGACATTTAGCA  75 9
CLC90_RS06655 1443685 .. 1443708 - -10.3  -2.63357   AATGACGTCAAAGAT          CAACGACCC AATGCA GGGCCGTTG           CAGGATTTCAACATT  74 54
CLC90_RS06645 1441146 .. 1441161 -  -3.9  -2.79183   GTCAGTGCCACTATA              GGCCG GTTTCT CAGCC               TAAAAAAGAGGGATT  45 20
CLC90_RS06640 1440327 .. 1440346 -  -2.8  -3.06696   TGGGTTTTGAATATA            TCTATCCG GATC CAGAGAGA             ATGCCGGTAAGTTGA  43 144
CLC90_RS06630 1439041 .. 1439067 -   -21  -5.55769   TTGGACAACAAAAAA         GCCCTCGGAAGA TTA TCTTCCGAGGGC         TCTCTTTATGCGTTC 100 70
CLC90_RS06625 NONE
        hisD NONE
CLC90_RS06615 NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
CLC90_RS06590 1431811 .. 1431835 -  -2.7  -5.46657   TATCTCAATAAAAAA          CGCTCGCGA TGATCAG TCGGGGGCG          TTTTTCTTTTGCCAG  80 60
CLC90_RS06565 1425801 .. 1425832 - -14.6  -2.83903   TGCGTTAAAAATGCA      TTGCCGTCAGGT GCGATAAT ACCTGACGGCAA       CAATGGCAGTTTACA 100 36
CLC90_RS06535 1417368 .. 1417393 - -15.5  -2.68532   GCTAAATCCAGATCA         TGCCGGTAAGG TTTT CCCTACCGGCA          AGCGATTTTTATTTG 100 34
CLC90_RS06525 NONE
CLC90_RS06520 1414652 .. 1414667 -  -3.3  -4.20024   ATAAAAAACATTAAA              TGAGA GATATA TCTCA               AACTTATGCCATCTT  58 70
CLC90_RS06515 1413607 .. 1413636 -  -5.7  -3.17571   AAGTTGTTAATTTAA       CCGCCGGATCACAA AGT TCATGCTCCGG-GG       TTTTTATTCTGACAT  55 48
CLC90_RS06505 1412020 .. 1412032 -  -4.1  -4.87318   GTTAAAAGGCAAAAA                TGGAC GAT ATCCA                CTGAGGAAACTCATG  71 135
CLC90_RS06500 1410142 .. 1410168 -  -6.6  -3.35197   CTGGATAGAGATTAA         CCTGCCCACA GGTTTGA TATGGGCAGA         TTATAAGCGACTTAG  61 50
        sanA 1409204 .. 1409229 -  -5.5   -5.0538   GTTTACGGTAAAAAA         GCCAGTTGG-AT TGA ATGCTAACTGGC         TTTTTACTTTATATT  78 61
CLC90_RS06455 1399661 .. 1399671 -  -2.4  -3.65902   GGGACTGCACTTAAA                 CGGC TCA GGCG                 GCTTCAATTTGCTCA  49 19
CLC90_RS06450 NONE
        fghA 1397463 .. 1397502 - -11.6  -3.84712   TAACCTCAGATTAAA  TAAACCAGGTGCTCTTTA GTCA TACTGAGCACCTGATTTA   ATCGCGGGTTTGCAT  95 78
CLC90_RS06435 NONE
        moeB 1394949 .. 1394983 -  -6.3  -2.53263   TTCAGTCTTAATCGA    CTCTCGTTCCGCGCCA TCCC TGGCGCGGA-CGCTTG     ACTCTTCTCCCCGTC  53 124
        rhtA 1387643 .. 1387658 -  -3.2  -3.19175   GGCCAAGAGAGTGAA              GTTGCT CGCT AGCAGC               CAGATTTCATTGTGT  46 83
CLC90_RS06400 1386631 .. 1386677 - -12.7  -3.14978   TAATAGGAATAGATA TCTTCTACTCCGTTAATTTTCA CTGT TTAAAATCAACGGAGTAGA-GA CGCTATCTACCGACT  93 28
CLC90_RS06395 1385751 .. 1385769 - -10.2   -3.4158   GGGAAAAATGACGAA             GGGCCAGC GTT GCCAGCCC             CAATCATTTAATCTG  80 66
        glnH NONE
        glnP NONE
        glnQ 1383170 .. 1383205 - -13.5  -3.80569   TAAAACAGAGCGAAA   TA-CCTTGCGGGAGGCA TGAT TGCC-CCCGCAAGGCTA    ATTTATCAGGATACG 100 31
        ompC 1377315 .. 1377330 - -10.4  -5.61596   ATTGTCATAAAAAAA              CCGGGA ATAA TCCCGG               CGAATGATTTGAAAA 100 78
        yedA NONE
CLC90_RS06350 1375352 .. 1375364 -  -4.1  -4.02534   AGTGAAATGGATAAA                CTCCA GTC TGAAG                CGTTCAGCAACTTAC  60 472
        sseA 1365533 .. 1365562 -  -9.3  -4.13343   ATAAATGCGGGAAAA       GAGAAGCGTGGCA CTAT TGTCACGCTTGTC        AACAAGCAGGAGTAT  85 232
CLC90_RS06275 1358663 .. 1358683 - -11.9  -3.68222   CTCCAACGCTAATAA            CCGGTGAAT GAC ACTCACCGG            CCCAAAGTGGCTTAT  93 37
CLC90_RS06265 1355939 .. 1355967 - -13.3  -2.74322   TGTAATGGCTTAAAG        TGAATTCGCGG TGAGATG CCGCGAATTCA        GCCAGAGTTTAAAAG  93 140
CLC90_RS06255 1353457 .. 1353471 -  -2.7   -3.5002   GTGAAGTATAACGAA               CCGCG TATGC CGTGG               CCGGAAGTGGTAAAA  49 287
CLC90_RS06240 NONE
        hlyD 1349103 .. 1349130 -    -2   -2.5474   CTTCACGCATAATAT        CGCCTCTC GATTAAGGTTGT GAGAAGCG         TATGGTGACCGGCAT  39 8
CLC90_RS06230 NONE
CLC90_RS06225 NONE
CLC90_RS06220 1344998 .. 1345019 - -13.1  -3.69434   CTAAGCAACCTGAAA           GGACACGAT TTTA ATCGTGTCC            TTTTTTATGTCTGAG 100 73
        yvcK 1340198 .. 1340216 -  -4.6  -3.05816   GCATTGGCGAGTGAA             CCAGAA ATCTTGA TTCTGG             ACGAGCCGGCTGCCG  49 370
CLC90_RS06155 NONE
CLC90_RS06130 1325688 .. 1325719 -  -9.3  -2.54171   ACGCGTAAAAAGTAG      CCGCCACCGCCAG TCTATT CTGGTCGCGGCGG       TATCAATGCTTTCTT  68 40
CLC90_RS06120 1323489 .. 1323500 -  -4.4  -3.61654   GATACCCAGCTCAAA                TAGG GTGA CCTA                 CTCCAGGAATCCTTT  54 105
CLC90_RS06095 1319325 .. 1319349 -  -2.1  -3.63515   GGGTAGCGTTAAGAA          TGTCCAATCGG TAT CGGATTGAATA          CGCCGTTGTGGCCGA  49 157
CLC90_RS06090 1318227 .. 1318246 - -13.6  -3.07816   GTTTCAGCCATCTAA            CCAGCAGG AATC CCTGCTGG             TTGATAAAGATTGTC 100 54
        galE NONE
        galT NONE
CLC90_RS06075 NONE
        galM 1313506 .. 1313525 -  -3.4  -3.18264   CTTTTGAGTCAGTAA            GCGGAAGG ATTG CAATCCGC             CAGCGGCAACTAGCA  46 271
CLC90_RS06065 1312869 .. 1312883 -  -5.8  -3.10409   GACTAACTTATTCAA               TGATAA CTA TTATCA               TTATATTGCGGGATG  55 304
CLC90_RS06060 1312032 .. 1312055 - -15.4  -4.22883   GAGTACTGAAAATAA          TAAACCCCGG CTTG CCGGGGTTTA           TTTATGGATACAATC 100 53
CLC90_RS06050 NONE
CLC90_RS06045 1306488 .. 1306511 -    -3  -3.31144   GGCTGACGGGTATAA          CCGTCGCCCTG ATG CAGG-CGCTGG          GTGCCAATGTGCAGG  47 312
CLC90_RS05940 1291552 .. 1291576 -  -9.3   -3.5944   ATCGATATCCTGAAA          CTGTTCGAGGA AGA TCCACAAACAG          AAGTGATTGTGATGA  71 516
CLC90_RS05895 1280118 .. 1280150 - -12.1  -5.48028   TAAATAAAAATAAAA      GGTCTGAGTTCCGTA ACG TATTGAACTCAGACC      AAAAACTAGCAGCCG 100 43
CLC90_RS05890 1279223 .. 1279250 -  -9.2  -3.61486   ATGAAAATATCACAA        GGAAAAGTGAGC GTTA GCCCATTTTTCC         TTTAATATTCAGTGA  78 66
CLC90_RS05830 NONE
        kdpA NONE
        kdpB 1264571 .. 1264591 -  -5.4  -3.51924   TCGTTATTCATACAA           GCCGGA-CA ACAC TGACCCGGC            ATTAATTAGTGGATA  57 43
        kdpC NONE
        kdbD NONE
        kdpE 1260421 .. 1260433 -  -2.7  -2.66963   CATGATGAATAAGAC                CCATT AGC AATAG                AAAACCCGATGCTAC  41 150
CLC90_RS05800 1259945 .. 1259967 -  -6.2  -3.39556   AAGGTGTGAATAACA           GGCAGTCC TATGGCG GGGCTGCC           TTTTTTATTCGGCTA  59 38
CLC90_RS05785 1256463 .. 1256478 -  -2.6  -4.08064   AACGCGGTGGCAAAA              TTATAG CGCG CCATAA               TACCCTAGCCGGTGA  57 166
CLC90_RS05780 1255979 .. 1256008 - -17.3  -3.56811   TAAAGAGAGTAAATA       TGGAGTGGCGTAA TGGA CTACGCCACTCCA        GCATGGTAACCGATG 100 44
        fldA 1253207 .. 1253240 - -13.9  -2.87962   GTTACAGAAAAAATT     CATGCCCTGAGTTTG AAAC CGGACTCAGGGCATG      TCGGCCAGATTAACC  95 35
CLC90_RS05765 1252424 .. 1252437 -  -3.1  -4.13767   TGGCCTATGTTAAAA               CCTGA TTAA TCAGA                TTTTATTTTTTGTCA  58 28
CLC90_RS05735 NONE
CLC90_RS05730 NONE
CLC90_RS05725 NONE
CLC90_RS05720 1238272 .. 1238290 - -11.8   -2.8352   CGTTAATGCAAGAAC             TTTGGTGC AGC GCACCAAA             AAAGGGAATCCTCGA  83 201
CLC90_RS05715 1236257 .. 1236282 -  -4.5  -4.30719   GTTTCTGATAATAAA         GCAGGGCGGCC CGAA GGTAGCCCTGA          TTAAGCTTATTTACC  66 78
CLC90_RS05710 NONE
CLC90_RS05705 NONE
CLC90_RS05700 NONE
CLC90_RS05695 NONE
CLC90_RS05690 NONE
CLC90_RS05685 1235387 .. 1235402 -  -8.2  -5.25735   GCAAAAAAGCAAAAA              GCCCGC CGAA GCGAGC               TTTTCTAAATATGGC 100 36
        miaB 1232439 .. 1232457 -  -3.1  -3.92185   ATACATAAAAAGCAA             CCATTAG AAAGG CTATTGG             TCAAAATTAAGGCTG  56 32
CLC90_RS05670 1231131 .. 1231147 -  -2.1  -2.65774   TAGATCGAGTATAAC              CTGGCTC ACG GAGCCTC              CTGCTCTGAAGGGGT  40 14
        ybeY NONE
        corC 1229690 .. 1229709 -  -2.2  -2.53164   CCACTGACGATTAAG            CAATGA AACGATAG TCATTG             AGGATTTATTCTTCC  39 31
CLC90_RS05655 1228143 .. 1228167 - -12.2  -3.31144   GTTTCACTGTCATAA         TGCGGGCG-CA GAAA TGACGCCCGCA          TTGATCAGCGGTTAC  89 30
CLC90_RS05650 1226444 .. 1226470 - -11.6  -6.09196   GGGAAAATAAAAAAA         TGCGGAGTGG GGAACGG CCACCCCGCA         TCCTGTCTACCAAGC 100 89
CLC90_RS05645 NONE
        gltK NONE
CLC90_RS05635 1224128 .. 1224151 - -14.6  -4.62069   GCCGTAGCCTAAAAA          GGCACGCCAC CCGC ATGGCGTGCC           TTCCACCCATTGACC 100 90
        leuS NONE
        lptE NONE
CLC90_RS05615 NONE
CLC90_RS05610 NONE
CLC90_RS05605 NONE
        rlmH NONE
CLC90_RS05595 1215541 .. 1215557 -  -2.1  -2.73681   GATGTACCCTAATCA              CCTTCAG TGC CGGGAGG              CGTCGGTGCCGCATC  41 2
        rodA NONE
        rlpA NONE
CLC90_RS05580 1211808 .. 1211825 - -12.7  -3.72405   GCTATAAAAGTATAA             CTCCCGC CTGA GCGGGAG              ATTCATATTAATTAT 100 79
CLC90_RS05575 1211191 .. 1211202 -  -4.4  -2.71322   GCAAGCGAGACATCA                TCTG GTTA CAGA                 AATGGTGGTGCCAGT  45 296
        lipB 1210407 .. 1210417 -  -2.6  -4.58395   GGCATTCGTTAAAAA                 TTTT TTG AAAA                 TTGTTTAAAAATTAT  64 125
        lipA 1209329 .. 1209361 -  -4.3  -4.41114   GGACGACATAATAAA     TG-ATCAGCCTGAA ACTGAA TTCAGGCTTATTCA      ATTATTTGACTTCTT  66 27
CLC90_RS05555 1207239 .. 1207257 -  -4.6  -2.90496   CCTGTTTTTAAATGA             CACTGTAT CAA ATACATTG             AGGAAAAAAAGTGAA  50 504
        crcB 1206288 .. 1206307 -  -7.8  -4.62302   CAATATTCTTAAAAA            CCCGCC TCAACACT GGCGGG             TTTTTTATTGCCCGA  86 371
CLC90_RS05535 1205245 .. 1205273 - -12.6   -4.1673   TAACTGTTGAAGAAA       CTCAGTCCCCATA GTGC TATGGGG-CTGAG        TAGGCACAGAAGGCA 100 44
CLC90_RS05525 NONE
CLC90_RS05520 1202808 .. 1202834 -  -5.8   -3.2964   AAACTTGCTTGATAA         TCATGGCACGGT AAG ACCGTGCTTTAA         ATTAACATCTTAGAA  57 155
CLC90_RS05500 1199742 .. 1199753 -  -2.2  -4.91712   CTCAAGGCACAAAAA                CTCCC GAA GGG-G                CTTCCAGACGGTAAG  68 62
        folD NONE
        ybcJ 1166837 .. 1166865 - -12.6  -5.48054   ATTAAAACTAAAAAA       TGCGGTT-CTGAC GTAG GTCAGTAACCGCA        ATTTTTTAGCCAGAA 100 88
CLC90_RS05305 1152992 .. 1153003 -  -2.2  -3.21099   CGTGCGCATTACGAA                GCAA TTAT TCGC                 TAATGGTAACGCTTT  43 18
CLC90_RS05300 NONE
        purE NONE
CLC90_RS05290 1150437 .. 1150459 -  -7.7  -4.92757   GCATCAACAATAAAA           CAGCGGC ATTCAGGTG GCCGCTG           TTTTTATCCGATGTA  95 81
CLC90_RS05275 1146632 .. 1146643 -  -4.4  -2.75669   TAATAAACGATATTA                TCAG CTCA CTGA                 TATCCTGAATGAATA  46 51
CLC90_RS05270 NONE
CLC90_RS05265 1144817 .. 1144838 - -11.5  -2.73159   GTAAGTGCTGGAAAG           TGCGCGGGA AAAT TCCCGCGCG            GTGATCATTAATCAG  80 46
CLC90_RS05260 NONE
CLC90_RS05255 1143286 .. 1143325 - -11.6  -2.81872   CGGATCATAAGAGGA  TAACTGCCCATCAACAGCA AAG TGCCAT-GATGGGCGGTTA  ATTAACGAGTTATTG  81 27
        copA 1139878 .. 1139904 - -13.8  -3.71917   ATGCTAAACGCTAAA         TGGCGCACAAGA AAG TGTTGTGCGCCA         TTAGGTTATCGCTTT 100 43
CLC90_RS05240 1138829 .. 1138846 -  -3.5  -5.30155   TTAGTAAGCAAAAAA             TTAATTC AATA GAATCAA              AATTATGACGTGATA  80 202
        ybaK 1138234 .. 1138244 -    -4  -2.87881   TAACGGGTGGATAGA                 GATT ATT AATC                 TCGTTTGGCAATATC  46 20
CLC90_RS05225 1134062 .. 1134081 -  -9.2  -4.45485   ACCATATCGACAAAA            GGCCTGCA ATTT TGCTGGCC             TTTGTCTTTGTTAGC  95 49
CLC90_RS05170 1120827 .. 1120842 -    -4  -2.70932   CTTTCCCCTTAATTA              CTT-GGC TAG GCCGAAG              GTTTTAGCCTGCTCA  45 7
CLC90_RS05165 NONE
CLC90_RS05160 1118800 .. 1118812 -  -4.7  -2.61831   CCCATTCGAAAAAGT                GCGGC CTC GCCGA                TATAGGTAGAGGCCG  48 65
CLC90_RS05145 1116897 .. 1116918 - -10.3  -3.94067   CATTATAGATAATAA           CTGATGATT ACGT AATCATCAG            TTGTGCAAATGTGAC  89 47
CLC90_RS05140 1116429 .. 1116453 -  -4.9  -2.93941   AAGATAAACGAATGA          GGGCGAAACCA ATG CGGTTTCGTCT          TTTTTTGGGCGCGAC  50 68
CLC90_RS05120 NONE
CLC90_RS05115 1107307 .. 1107320 -  -9.5  -5.60993   TGGGGCATAAAAAAA               GCCGC GAGT GCGGC                TTTTTAAGAAGGTGA 100 56
CLC90_RS05110 1106922 .. 1106935 -  -3.9  -3.17075   CTCGCGTTAATTTAA               TTCTT ATTG AAGAA                ACGGCCAAAACGTTG  48 8
CLC90_RS05105 1106554 .. 1106565 -  -3.6  -3.41798   GCTTAAAAGAAGATA                CCAG TTTA CCGG                 CTTCTATCCTGGTTA  51 215
CLC90_RS05100 1105496 .. 1105509 -  -2.3  -2.68755   ATAATCATTATACGA               GCAGT AAAA ACAGC                TAGGAACTAAATAAG  40 102
        tomB 1105041 .. 1105060 -  -2.8  -4.84602   ATATAAATAAAGAAA            CATAGGGT AACG ACCCTTTA             ATTTTTCATCAGGGC  67 23
CLC90_RS05090 1104681 .. 1104691 -  -6.8  -3.64703   TTTGCGTGAGGCAAA                 CAGC CAT GCTG                 GTTGGCGTGAAAATG  65 137
CLC90_RS05080 1103633 .. 1103654 - -10.3  -3.38072   GTCAGGCAACATCAA           GGTAATACA TGAG TGTATTACC            CACGCTGTTCCAGCT  78 51
CLC90_RS05075 1102361 .. 1102382 - -14.5  -3.16556   AAAGATGATAGCGAA           GGGGCGATA ACAA TATCGCCCC            TGCAATTATTTCAAC 100 82
CLC90_RS05045 1094837 .. 1094852 -  -4.6  -3.04144   TGGCCACTGTGAACA              GCAGGC CGTA GCCCAC               TATTTGCAACATTGG  49 174
CLC90_RS05035 NONE
        queC 1091334 .. 1091361 -  -5.4   -3.1855   TGGCGGAAGAGTCAA        GCGTCCGCGCCA TATA TGGCGCGGAATA         AGACGACAAGGTTCT  53 106
CLC90_RS04975 1079275 .. 1079304 - -10.1  -2.83846   GACATATAAAACCTA       TATGCTCTGCTCCA ATT TGGGGCAGAGCA-A       CGTTAAGCAACTAAC  72 44
        ampG 1077751 .. 1077769 - -13.2  -5.80248   GAACATATAAAAAAA             GCCGGTAT GGG ATACCGGC             TTTTTAAAGTCTCTG 100 42
CLC90_RS04965 1076706 .. 1076738 - -10.6  -2.70017   GGTAAATTTAAATAT      CTTCCGGGGTGACT TAAAT AGTTACCCCGGAAT      TATTTAGTTAGAAAT  74 33
CLC90_RS04960 NONE
CLC90_RS04955 NONE
CLC90_RS04950 NONE
CLC90_RS04945 1072510 .. 1072524 -  -2.8  -3.05596   CAGCTCTTTAGTCAA               CCATCA TAT TGATGT               TGAGGTTGTACATAA  43 3
CLC90_RS04940 1071551 .. 1071580 -  -7.7  -3.28472   GGGTAGGAAAAATGA       CGCGGCCAAGAGG AAAT CCGTCTGGCCGCA        GTATAAATTTTTCGG  66 46
CLC90_RS04935 1069773 .. 1069784 -  -4.4  -3.97911   ATCAAAGACAGCAAA                CTGA AGGT TCAG                 GCTCAGATCCAGGGT  60 213
CLC90_RS04925 NONE
        yajL NONE
CLC90_RS04910 NONE
CLC90_RS04905 NONE
CLC90_RS04900 1061482 .. 1061499 -  -4.2  -3.88097   TCATATAACTAATAA             CGATAA TCTTTT TTATCG              ATACCGTATTTTTTC  57 1
CLC90_RS04890 NONE
CLC90_RS04885 1058188 .. 1058207 -  -3.4  -2.77899   CGGTTTCAGGAATCA            CCTGAGCA CCGG TGCGCTGG             TTGCAGATAAACATT  43 74
CLC90_RS04880 1056144 .. 1056170 - -13.1  -3.16475   CAGGCAGAGAGTCAA        GTGTCCGCGCCA GGAA TGGCGCGGA-AC         GAGCCGACAAGGACG  95 105
CLC90_RS04820 1045164 .. 1045174 -  -5.4  -2.81182   CTTTAATACAAAGAG                 CAAG TGG CTTG                 AGTCAAATAATCGTT  50 60
CLC90_RS04815 1044318 .. 1044343 - -14.1  -5.31059   AGACGAAGCAAAAAA         GACCAGTCAGC ATGA ACTGACTGGTC          TTGTCTTATTCGGTT 100 65
        sbcD NONE
CLC90_RS04770 1029440 .. 1029453 -  -3.1  -4.14511   AACTGCACTCTAAAA               GTTGA ACAC CCAAC                GGAGTAAGGCGCATT  58 301
        rdgC 1026647 .. 1026661 -  -2.8  -5.09762   ACCCTAATATAAAAA               CTCATC AAT GATTAG               GATGCGGGTGCCAAA  73 384
CLC90_RS04710 1015843 .. 1015888 -  -5.6  -2.81223   GCGAAGAAGAGAGTA TCCGCCGTCTGACGAAT-GAA AAGAA TTCTATTGGTCATACGGCAAA ATGGGTCGCAATCAT  49 395
        pepD 1008063 .. 1008085 - -11.3  -5.67967   ATCACCATAAAAAAA          CGGCG-TGCC CACA GGCAACGCCG           TCTATATCACTCAAT 100 53
CLC90_RS04660 1005763 .. 1005786 - -15.3  -2.62396   TATTCTTTGACATGA          CAGCCCGGC GCTATG GCCGGGCTG           TACTTACCTAGACTT 100 33
CLC90_RS04615  997323 ..  997344 - -12.3  -3.91084   TGACGGCCAATGAAA           CCTGGCACA AAAT TGCGCCAGG            TGAATTCGCTCTATT  91 36
CLC90_RS04600  992914 ..  992939 - -16.3  -3.42503   CGCCAATATTCAGAA         GCCCTGAGTTA GCAA TAACTCAGGGC          TTCGTCGTTTCTGCG 100 265
CLC90_RS04585  991240 ..  991262 -  -8.4   -3.0353   CTTGGCATAAACAAG           GTGGGCGC TTTCTTG GCACCCAC           TTACATGCATTGGGC  63 179
        gloB  989887 ..  989897 -  -5.4  -4.57218   ATAACACAACTAAAA                 GCTT CAG AAGC                 TATCTTTCCTGGCCC  70 18
CLC90_RS04570  988389 ..  988404 - -10.4  -6.02345   TAAGCATAAAAAAAA              GCACCC CGTA GGGTGC               TTTTTAGCAGTTATC 100 52
        bamD  975409 ..  975432 - -15.4  -5.29445   GGGCAAGAACAAAAA          CGGCAGCTTA ACTT TAAGCTGCCG           TTTATTTTATATTGG 100 54
        raiA  974629 ..  974644 - -11.8   -5.4505   GGCGTCAATAAAAAA              CGCGCC CGAA GGCGCG               TTAGATCCTCAATAA 100 54
CLC90_RS04500  973199 ..  973220 -  -5.9  -3.86015   GAGGCTGGTGATAAA           GTCATCC TGTTGCTG GGATGAC            TTTTTTATGGGGGTA  63 50
        yehT  969564 ..  969574 -  -6.8  -3.73042   TTCGGTATTAAAAGA                 GGCT ATT AGCC                 AATCCTGGTTTTAAA  65 468
CLC90_RS04480  968163 ..  968181 -  -5.9  -5.40072   TTTTTTTTAAAAAAA             GGGGCCA TCTTT CAGCCCC             TTACTTTTACATGAA  86 32
CLC90_RS04475  967045 ..  967072 - -12.8  -3.63589   GAAAAGAGGTGCAAA        TATTAGCGTGGC CAGT GCCACGCTAAGA         GTATTTATTCACTAT 100 49
CLC90_RS04445  962147 ..  962171 - -11.5  -3.33261   ATAGCGATAGATGAA          GGTTCCTGTCA GGG CAACAGGAACC          TCGCTGACGGTTGCT  86 39
CLC90_RS04440  960783 ..  960796 -  -8.1  -5.06451   CATTAGCGGAAAAAA               GACGC GAGA GCGTC                TTTTTTATTGGCTGA  95 58
CLC90_RS04355  948026 ..  948036 -  -3.2  -4.53777   CGTAATCAAAAATAA                 GCTG TTT CAAC                 GTAGCATTACTGAAG  63 249
CLC90_RS04350  946146 ..  946170 -  -7.9  -5.49729   AAGGACTTAAAAAAA          CTCCCAACAAA TAT CTTGTCAGGAG          TCAGTTAACGCTCGG 100 60
CLC90_RS04345  944456 ..  944494 -   -11  -3.31589   AAGTAGAAGTATTAA   CTCGGCGTCTGGCCGT GGTTATT AGAGCCAGACGCTGAG   TTATCCTACCGTTTT  81 41
CLC90_RS04335  942799 ..  942813 -  -2.9  -2.57067   TTAACATTCAATTCA               TCTTA ATCCG TAAGA               GAGTCTTAGTGATAA  41 52
CLC90_RS04330 NONE
CLC90_RS04325 NONE
        gspD NONE
        gspE NONE
        gspF NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
CLC90_RS04285  933711 ..  933722 -  -5.8   -4.3534   TTTCAATCACCAAAA                CCGT ATTG ACGG                 GAAAGGACGCTAATA  70 1
        gspL NONE
CLC90_RS04275  932025 ..  932037 -  -5.5  -2.56747   CATCCATCATAATAT                TGCCG CCT CAGCA                CGTTGTAATACCAAG  49 4
CLC90_RS04270  931127 ..  931138 -  -4.4  -4.03586   GGTGAAAGAGAACAA                TGCT GATC AGCA                 GTTGTGTACAGAACT  60 112
        gbpA  928833 ..  928845 -  -2.7  -2.71712   CCGTTTTCTCCAAAT                TTTGC CGT ACAAA                CGGGTGAGGCAGGGT  41 83
CLC90_RS04140 NONE
CLC90_RS04135  902366 ..  902388 - -11.3  -3.41222   CCTCAACGTTAAATA           GCGGCTGAC TGACT ATCAGCCGC           AGAGATATTAGGTAT  89 33
CLC90_RS04130 NONE
CLC90_RS04125 NONE
CLC90_RS04120 NONE
CLC90_RS04115 NONE
CLC90_RS04110 NONE
CLC90_RS04105  899202 ..  899217 -  -6.2  -4.81814   ACTAGGATAAGAAAA              GGAATT TTAT AATTCC               ACACCAAAAATACGC  80 16
CLC90_RS04100 NONE
CLC90_RS04095 NONE
CLC90_RS04090 NONE
CLC90_RS04085 NONE
CLC90_RS04080 NONE
CLC90_RS04075  893251 ..  893263 -  -4.8   -3.7732   CCCTCATACGAACAA                CGGT GGTTT ACCG                CCTTGCCTGCATGAA  59 296
CLC90_RS04025  884822 ..  884833 -  -5.8  -3.96892   AAGCGCCATGAGAAA                CAGG TTGA CCTG                 CCCCCAGGATTAGAT  66 48
        mutS  881184 ..  881204 - -11.9  -5.41941   GAAATTAAATAAAAA            CGGTGAGCA TTT TGCTCACCA            TTTTTTTGCTTATAT 100 163
CLC90_RS03940  868145 ..  868165 - -15.5  -5.07971   GAAAAGAACGAAAAA            GGGCGATCA TAG TGATCGCCC            ATCGCTGTATTTACG 100 83
CLC90_RS03935 NONE
CLC90_RS03930  867246 ..  867258 -  -4.8  -3.09823   CGGCCTAAAACGAGA                GTGC GGATT GCAC                GAAGGTTAAGGTACG  51 165
        queD  862035 ..  862048 -  -4.5  -4.93877   GCTGACGAAATAAAA               CATCC GGTC GGACG                GATAAGAGACATTGA  77 263
        barA  850272 ..  850293 -  -6.5  -2.94597   AAGCCGGAATTAAAG           CCGGTGACG TGAT CGTCACCAT            GAACGGTAAGGCCAT  55 497
        mtnN NONE
        btuF  845866 ..  845879 -  -3.8  -2.80779   CCAACATCAAGATGA               CTCC GAGACA GGAG                AGGGAACGCTGGCCA  45 3
CLC90_RS03850  845210 ..  845230 -    -9  -5.28176   TTGAGGCATAAAAAA           CCGCG-ACC TACA GGTTCGCGG            TTTTTTTTAATCTGG 100 44
        hemL  841698 ..  841716 -  -7.4  -5.18726   GTTCGATAATAAAAA             CCCGCA GCGTCAT TGCGGG             TTTTTTATACGAAAA  90 53
CLC90_RS03820 NONE
        sfsA  834998 ..  835010 -  -7.7  -3.80625   CCGGTAGAACCTAAA                CCGTT AAT AACGG                CAAGCGAGCAGCGAG  72 8
        dksA  834295 ..  834320 - -14.7  -3.05844   CCCGTCATGTTAATA         CGGTGCCGGAG AAAA CTCAGGCACCG          TGTCACACGTTCTTG 100 46
CLC90_RS03800  833330 ..  833352 -  -2.7  -4.71382   AGAACTACGGAAAAA          CAGCG-GCTA ATCA TAGCTCACCG           AGGTTCCTTTGAGAA  64 20
CLC90_RS03795 NONE
        folK  831282 ..  831299 -  -2.6  -4.57341   AAGTGCGGGGAAAAA             CGACCC GAAAAT GAGCCG              AAGTTACCAGGGAGT  61 29
        panB  830206 ..  830223 -  -3.4  -3.27774   CACCCGAATCACTAA             CTGGGA TAAGCG TCCCAA              GATTCACTCGTTTGC  47 80
CLC90_RS03780  829064 ..  829080 -  -6.6  -3.16921   ATCAATTCGGATGAA              TAACGC AGATG GCGTTA              ACACTGAGGCATCCT  59 207
        panD  828565 ..  828594 - -12.3  -5.06103   ATAAGCGTCAAAAAA       TAAAAAGGAGCCA AAAA TGGCTCCTTTTTT        ATGAATATCAATATG 100 51
CLC90_RS03755  824389 ..  824401 -  -5.5  -3.14931   CGGATGGGGCATTAA                CGCAA AGA TCGCG                AGGTTTCCTTCGAAC  53 72
CLC90_RS03740  821375 ..  821411 -  -3.8  -3.16154   CAACATCATAGCCAA   CTCTGCCTGAGGTTGCA CGGT TG-AATTTCAGACAGAG    GTTATTGGGTAGGGT  48 42
CLC90_RS03735 NONE
CLC90_RS03730  819601 ..  819624 - -13.2  -3.54424   TCTTATGGTTTTAAA          CACAGGCAGG TTAA CCTGCCTGTA           GTCAATTACACTTCT 100 31
CLC90_RS03725  818286 ..  818296 -  -4.6  -3.05384   GTGGCGGGTAGTGAA                 CGCC AAT GGCA                 ATTGGTGGGGCATGA  49 224
CLC90_RS03710  812938 ..  812958 - -12.6  -4.05319   AGAAAGAACATCAAA            CGGCTCCT TATTC AGGAGCCG            TTTTTACTGAAATAA 100 46
CLC90_RS03680  803464 ..  803474 -    -4  -4.11216   TCTTTAGCGCGAAAA                 GTTA CAC TAAC                 AGTGATTGTCGTAGT  60 228
CLC90_RS03665  800940 ..  800961 -  -5.9   -5.0133   GAGCCTCGCAAAAAA           GAGCTCA TTACTTTC TGAGCTC            TTTTTTCTATCAGGG  82 48
CLC90_RS03660 NONE
        gspE NONE
CLC90_RS03650  797429 ..  797448 -    -5  -3.84648   CTGAATATTATGAAA            GGACAC TGATTGAG GTGTCC             TTTTTCGTTGCCCGC  59 199
CLC90_RS03635 NONE
        zapD NONE
        yacG  794166 ..  794187 -  -7.3   -2.8502   AAACAAAGCGAATTA           CAGGCAGAA GAGT TTCCACCTG            CGAATCTGTCGATTG  57 160
CLC90_RS03605  789778 ..  789788 -  -6.8  -3.68244   AGGACGAAGCCGAAA                 TGCC ATT GGCA                 TTTAAAGCACCGTCC  63 65
        alaE  770546 ..  770569 - -16.8  -3.22409   GAATCATGAATGCAA          TCGGGCACCT AAAT AGGTGCCCGA           ATTCTATCTAAAACG 100 62
CLC90_RS03490  762481 ..  762498 - -14.1  -6.24157   ACGGATAAAAAAAAA             CCCGCGC ATTT GCGCGGG              TTTCTGAATCTCGAT 100 48
CLC90_RS03485 NONE
        leuB NONE
        leuC NONE
        leuD  757326 ..  757339 -  -2.3   -3.6682   GGTTATTCAGTTAAA               CGCTT TGGC ATGCG                TAATATTATGTTGCT  50 426
        sgrR NONE
CLC90_RS03450 NONE
        thiP NONE
        thiQ  750723 ..  750736 -  -5.2  -2.76969   TAAGGCACGGTAAAC               GCGG GCCGGA CCGC                TTGAGCATCTGGTTG  49 166
CLC90_RS03430  747305 ..  747321 -  -9.5  -3.96841   CCGGAATAAACAGAA              CAACGTA CTT TACGTTG              GCAGGCAGAGTCCGT  83 145
        rapA  744183 ..  744203 - -15.5  -3.80858   TGAGAATGGATCAAA            GAGCCGGAT GCG ATCCGGCTC            TTCCTGGTTCAGGTG 100 43
        rluA  743477 ..  743487 -  -3.2  -3.42347   AAATCATTCAAAAAT                 CAGC TTC ACTG                 CGAAAGTGCATTGGT  49 7
        lptD  739850 ..  739863 -  -3.7  -3.09516   TTTTCCATTATGTAA               TCCGC AGTT GCGGG                TTTAAGTTCACTGAA  48 60
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH  735439 ..  735461 -  -6.3  -4.87291   GATCTGAATGAAAAA           TGGCACAAA TTGAT TCCGTGCCA           TTTAATCTCGTTAGA  80 46
CLC90_RS03360  731435 ..  731463 -   -11  -3.21726   CGGTAGAAGAGTCAA       GCG-TCCGCGCCA GGGA TGGCGCGGAACGA        GCCGACAAGGACGTA  79 128
CLC90_RS03305  718828 ..  718857 - -14.5   -3.0806   TTTAAACTGTGAATA       TAAAAAAACCGGC CTAA GCCGGTCTTTTTA        CTAAGCAGTCAACTT 100 47
CLC90_RS03280  712101 ..  712122 -  -8.1  -5.97979   ATAAGAATAAAAAAA           CTCCGAATA TGAA TATTCAGAG            TTTTTTGGGATGTGT 100 88
        yaaA  705019 ..  705048 - -11.5   -4.1721   ATCGACATCGCAAAA       GCAGAAAAGGGCC GGTT GGCCCTTTTCTAT        TAATGATGACGTATT 100 60
        arcA  698456 ..  698473 -  -9.1  -6.24157   ATGGATAAAAAAAAA             CCAGCAC TTCC GCGCTGG              TTTTTTTGCCTATCA 100 46
        robA  696774 ..  696786 -  -4.7  -3.80573   TGGATTATCAGCAAA                GCCTG TGG CTGGC                ATCAGGTTGGATTGT  59 98
CLC90_RS03210  695287 ..  695302 -  -6.2  -3.01791   ACTCTCCGCTGAAGA              TAACCA GAAC TGGTTA               AGCTTTGTTGCATTG  53 367
CLC90_RS03190  688641 ..  688664 - -12.4  -3.30124   TCTGAGGTTGGATAA          CCGCCCGG TTTTATTG CCGGGCGG           TAAAGTACCGTGAGG  95 43
CLC90_RS03185  687854 ..  687864 -  -3.2  -2.73994   AGTTTGCCAACATGA                 CTGC TGA ACAG                 TACTTTATCCGACAG  43 64
        ettA  685683 ..  685708 - -13.3  -4.17316   ACCGCCTGAAAATAA         TACTGCCCACC GAAT GGCGGGCAGCA          TAGTCATAACTTTAT 100 47
CLC90_RS03155  680126 ..  680146 -    -4  -3.54424   GCCGATGCCGCGAAA           GCGAA-AGG TATT CCTACTCGC            GTCGGTAACATTTTC  52 437
        rsmC  666497 ..  666510 -  -2.3  -5.00616   GGTTGCTGTAAAAAA               CAGCG TATC CGCTT                TGATTGTGCGGATTC  68 266
CLC90_RS03085 NONE
CLC90_RS03080 NONE
CLC90_RS03075  665994 ..  666009 -  -2.6  -4.77036   GGGGAGTATCAAAAA              CAAA-CG AAA CGATTTG              GGGATAGACTGAAAA  67 77
CLC90_RS03065 NONE
        dhaR  661563 ..  661581 -  -7.4  -3.90744   TTGCTGGCTAAAGAA             CTGATGCC ATC GGCATTAG             CCAGCTTGAATCGCC  69 271
CLC90_RS03010  648589 ..  648601 -  -4.8  -3.65351   TCATCCGGAGCCAAA                GTGC TGGCT GCAC                ATCAGCTACTGGCAG  57 424
CLC90_RS02850  611456 ..  611470 -    -5   -5.7946   CGCGGAACAAAAAAA               GATCTC AAG AAGATC               TGATTGTTTACTAAC  95 61
CLC90_RS02790  602735 ..  602745 -    -4  -3.27213   ACAAACAACACGTAA                 TCAA AAG TTGA                 AATGTTAATCGATAA  51 280
CLC90_RS02775 NONE
CLC90_RS02770  597162 ..  597178 -  -6.5  -3.53444   TCAGCGTGGTTCAAA              GATGCGG ACT CCTCATC              TTGTTCCTTTGTCGC  61 117
        pepA NONE
CLC90_RS02740 NONE
CLC90_RS02735  588387 ..  588427 - -11.2  -4.67234   ATGCAATGCTAAAAA  GCAGCGGGTCATGATAGT GAATA ATTATCATGACCCGCGGT  TATCCCATTATGTTG 100 123
CLC90_RS02730  587714 ..  587735 - -11.6  -2.57132   GTTTGGTCTCATAAG           CCCGCACT TTCTAC AGTGCGGG            TTTTTTTAATGGGTT  80 56
        argF  585957 ..  585971 -  -8.6  -3.59627   ATCAAATGGTGGAAA               CGTTCT AGC AGAACG               TCGGCATACGCCCGT  73 117
        nrdD  583545 ..  583559 -    -5  -4.16943   CCTGAGACGGTAAAA               GCTAAC CGG ATTAGC               CCAATTGGCCGCTAG  63 21
CLC90_RS02710  582971 ..  582995 -  -8.6  -5.07107   TAAAGGCGGAAAAAA         GCCTCCGCACA CGGT TG-GCGAAGGC          GAGATTTCACGGGAT 100 43
        phnG  582117 ..  582137 -  -2.6  -3.14848   TCGGGTGATTAAAAT            GACTGA GTAGTGTCA TCAGTC            TTCTCCCCGTACCAG  44 20
        phnH  581559 ..  581573 -  -2.7  -2.85874   ACATACATCAGCACA               CCTCC AGGTG GGTGG               TTCGGGGAATGGCCA  42 3
CLC90_RS02695 NONE
CLC90_RS02690 NONE
        phnK NONE
        phnL NONE
CLC90_RS02675  576917 ..  576941 -  -2.7  -3.43328   CATCAAATAGATTAA          GCGCGCCATTA GAA TACCCGCACGC          CTTGACGCCAAACAT  48 9
CLC90_RS02670 NONE
        phnP  575592 ..  575602 -    -4  -4.17132   AAAGTGGCGAATAAA                 TCTT TTA AAGA                 GTGACCACTTGATTG  61 19
CLC90_RS02650  573402 ..  573414 -  -3.4  -3.30006   AGCAATCCACATCAA                TGAC GAAAG GTCA                TTAATTATTGGAAAA  47 335
        speF  571079 ..  571102 - -15.4  -2.87931   TTTATCTTTCAGAGA          CTGCGGTGAT AAAT ATCACCGCAG           GTTTGAGTGTTATTT 100 66
CLC90_RS02640  569698 ..  569726 - -15.4  -4.24606   AAGGTAGAGGGAAAA        TGCGGACGGCAA GAAGA TTGCCGTCCACA        AAACGGTTTACTTTG 100 33
CLC90_RS02635  568768 ..  568791 -  -7.4  -2.68545   GCCGGACAACAAGAG          GGCACGGAAA AAGT TTCCCGTGTC           ATGGTGTCGTGTTGA  58 524
CLC90_RS02620 NONE
CLC90_RS02615  566066 ..  566089 -   -11  -5.63645   GTAAAATATAAAAAA          GGGAGAGGCA GCGA TGTCTCTCCC           GATATATTCTGTTAT 100 50
CLC90_RS02600  561487 ..  561502 - -10.4  -5.15167   GATGAGTAATAAAAA              CCAGCC TTCG GGCTGG               TTTTTTTACGCCTAT 100 56
        yhbY  542850 ..  542877 - -12.8  -4.86731   TTTTTGTAAAGAAAA        GAAAAAAGGCCG CAAG CGGCCTTTTATC         GGAACAAAGTGCATG 100 67
CLC90_RS02500 NONE
CLC90_RS02495 NONE
        pmrB  538860 ..  538876 -  -7.9  -4.67904   CATTAACCCCAAAAA              GGCTGCC TAT GGCAGCT              TTTTTTGTTATTTTT  86 47
CLC90_RS02465  534621 ..  534632 -  -5.8  -2.74784   ATTTCTTAAAATTGA                CGCT GTAC AGCG                 ATATGTGCCAACCCT  53 4
CLC90_RS02450  533290 ..  533313 - -19.6  -3.18264   TCCTGTATTGATGAA          CCGCCGGTGG TTGC CCACCGGCGG           TTTTTTTATGACGGC 100 31
        argR  531183 ..  531200 - -14.1  -3.65001   TAGATTAGATAAACA             GCCCCCG GCAG CGGGGGC              AACAGGGTTCGCTGG 100 177
CLC90_RS02430  528573 ..  528592 - -13.6  -5.94713   ATCGGATAAAAAAAA            CAGCGACC TGAT GGTCGCTG             TTTAATTGCATGGAT 100 53
CLC90_RS02425  527680 ..  527698 - -14.6  -5.46698   TTGAAAATGAAAAAA             CACCGCTC ATT GAGCGGTG             TTTTTTTGTCGAGCC 100 50
        msrA  520780 ..  520800 -    -4  -4.75518   CATATAAAATTAAAA           TGGCGAGCA GGAA CGCT-GCCA            TCGGGCTGAGTGAAC  71 83
CLC90_RS02400  519321 ..  519345 - -15.7  -3.53031   GTCACGCCAAATTAA          TTGCGGCCCCA TAT TGGGGCCGCTA          ATATTTTTAAGCTAG 100 59
CLC90_RS02390 NONE
CLC90_RS02380  514923 ..  514938 -  -4.6  -4.84539   GAATGAAAGATAAAA              GTGCTC GGCT GAGCGC               TTGAGGTTAATGACA  74 222
        ytfE  514113 ..  514131 -  -8.8  -5.75342   TTTTTTGAAAAAAAA             GAGCGGTC AGT GATCGCTC             TTTTTCTATTATTTT 100 49
CLC90_RS02365  512226 ..  512244 - -11.7  -4.11484   GTTAACCCGTCAAAA             CGCCAGC CTCGT GCTGGCG             TTTTGCTTTTAAGGG 100 223
CLC90_RS02335  509942 ..  509965 -  -5.8   -3.1733   TTGGTCATAAAATTA          CCCCGACGGC CTTG GCAGCCGGCG           CACGCTTCTTCAGCC  55 133
        bsmA  508398 ..  508426 -  -4.5  -2.78211   ATCGCGCGAAAACAT        GGCACTGGGTT GTCCATT AACCCCGTGAC        CTTTTTGCAACCAGA  47 350
        queG  483100 ..  483116 - -10.9  -2.62616   TCAGTTGGTAGAGCA              CGACCTT GCC AAGGTCG              GGGTCGCGAGTTCGA  72 379
        rsgA NONE
         psd NONE
        mscM  476430 ..  476453 - -11.1  -3.04792   TCAGCAGTCTGAAGA          GCCTGATTC TTTAGG GAATCAGGC           TCTTTGTCCAAAAAT  79 54
CLC90_RS02170 NONE
CLC90_RS02165 NONE
        frdC NONE
        frdD  471507 ..  471527 -  -8.2  -3.26841   TAAAGAAAGGGAATA            CGGCCCAC ATGGA GCAGGCCG            TTAAGAACGGAATTA  69 38
         blc  470784 ..  470804 -  -6.1  -4.80455   GATTTAAATAGAAAA            GGGCCAA CCAGTTT TCGGCCC            TTGTCGATCCTTACC  80 82
CLC90_RS02140  469201 ..  469217 -  -9.4  -3.35679   GCCCTGTATGTATAA              GGGGGA ATATA TCCCCC              CTTAATAGTAAAGCG  74 52
CLC90_RS02135  466756 ..  466774 -  -4.5  -2.91061   TTTTAATAAAAAACT             CCGCCGA TCGCG TCAGCGA             CACATCACCGATTGA  50 19
CLC90_RS02130  465941 ..  465954 -  -3.8  -3.70443   TGAGGACGAAAAAAT               GCTG AGAAAA CAGC                TTAAACAGAGCAGAG  53 56
CLC90_RS02125 NONE
CLC90_RS02120  464290 ..  464316 -  -7.2    -2.674   CTAATATGTAAAGAT         CAGCGGCAACGT ATC AGGTTGTCGCCG         CCGCTTTTACTTATA  58 36
CLC90_RS02115  463196 ..  463242 - -11.8  -4.21974   CTAGCAGTTAATAAA TAAAGAACCCCAATAATTGAGT GGC ATTCGAATATTGGGGCTCTTTA CGTTTCCCATTTTTA 100 104
        epmB  461460 ..  461485 - -10.5  -3.85878   GAATAAGATCAATAA         TCAGGAGATGC CAAG GTATCTCCTGA          CCTATTTTTATGGCT  86 39
        aspA  456071 ..  456099 -    -6  -5.04601   GCCAGAAAGTAAAAA       GGCACGCT-GTCC AGAG GAATTAGCGTGCC        TTTAAGGGCTACCGG  82 50
CLC90_RS02075  454675 ..  454693 -   -16  -3.23274   TGGGGGATAATTGAA             GGGGCGCA GTG TGCGCCCC             TGGAAAATGTTAGAG 100 35
        cutA NONE
        dsbD NONE
CLC90_RS02060  451900 ..  451918 -  -2.5  -3.72893   CATTTCCCCATCAAA             TAAATGA CAGAT TCATTCA             GCTAAGCGCACCATT  50 23
CLC90_RS02055  451531 ..  451554 - -10.2  -4.62336   ATTGTACGTGAAAAA          TCCCGCTCGC ATTA ACGGGCGGGA           TTGTCAAGAGCCTTT 100 170
         acs NONE
CLC90_RS01925 NONE
        actP  420963 ..  420984 - -12.9  -3.81089   GACAGAGATGAAGAA           GCCCCCTGC TTGC GCCGGGGGC            TTTTGGCGTTTTCAG 100 281
CLC90_RS01890  414307 ..  414335 -    -9  -2.87211   ATTGCGTCGGACATA        TATAGAGGGAGT TAATT ATTCCCTCTATA        TAGATAGAAATAGAA  67 59
CLC90_RS01860 NONE
CLC90_RS01855  409040 ..  409055 -    -9   -5.1287   TTCATAGCCAAAAAA              GCTGAC AAAA GTCAGC               AAAATAAAGGGAAAG 100 94
        rsmB NONE
        trkA NONE
        mscL  405381 ..  405391 -  -5.4  -3.08798   AGGTGCTACTGAAGA                 CTCT ACA AGAG                 GATGATTTTTTTCAT  53 388
CLC90_RS01670  387700 ..  387712 -  -7.7  -3.19656   AAAGGTATCCAGGAA                CAGCT GAA AGCTG                GTCCACTGGCAGGTT  63 372
CLC90_RS01625  381460 ..  381477 - -12.7  -5.06816   ACGCGTCAATAAAAA             GCCAGCC GCAA GGCTGGC              TTCTTTGCAATACCA 100 44
CLC90_RS01600 NONE
CLC90_RS01595  374835 ..  374846 -    -3  -3.05384   GCTCTGTTGAGGCAA                TAGA TTTA TCTA                 TGACATAGCTTTAAG  44 126
CLC90_RS01590  373729 ..  373743 -  -7.1  -3.03441   CACTATTGGGTAACA               GACCG GTTAT CGGTC               TGAGATTTCTGAAGA  61 90
CLC90_RS01580 NONE
CLC90_RS01575  371582 ..  371617 -  -4.2  -3.34522   ATATTCTTCAATTAA    CTATCGAT-TTTTTTAC CCT GTAAAAAAGAACGATGG    TCATGGCCGGAGAAA  51 143
CLC90_RS01570  370595 ..  370622 -   -10  -3.06302   ATCAGGTGGAGTGAA        CCAGAAGCTATT AATT AATAGCCTCTGA         GTGTATTAAATTGGA  73 64
CLC90_RS01565 NONE
CLC90_RS01560 NONE
CLC90_RS01555 NONE
CLC90_RS01550 NONE
CLC90_RS01535  364438 ..  364468 - -12.7  -5.45802   TTTTGAAAAGAAAAA       GCCGGTATTGTAT TAAGG ATACGATACCGGC       TTTGGGAGGAGTTAA 100 37
CLC90_RS01530  362298 ..  362314 -  -9.4  -3.19293   AATCGGAAGATTGAA              GGGAGG TGGTT CCTCCC              TTTTTTAATCAGCTA  72 34
CLC90_RS01510 NONE
CLC90_RS01505  355972 ..  355993 -  -5.1  -3.76224   GTCTGACTTACGAAA           GTGGTGGCTG GAG CAGC-ACCGC           TTTGTGGCGCTTGGT  59 326
        tsgA  352138 ..  352167 - -14.4  -5.26119   GCGTTAAAAATAAAA       TCGCCTTCCCGCC GTATT GG-GGGAAGGCGA       TAATCACGACGTCAG 100 41
CLC90_RS01480 NONE
        nirD NONE
        nirC  346777 ..  346797 - -13.3   -3.6336   CTATAGCAGACAGAA            CCAGCCCTA GTG CAGGGCTGG            CGGCCATAATTATGA 100 35
        cobA  345187 ..  345211 -  -9.3  -4.26076   CCATTGCCAGCAAAA          CCAGGGACA TGTATTG CGTCCCTGG          TTTCAGACGGCGGAT  88 139
CLC90_RS01400  332264 ..  332287 - -14.6  -5.27923   TAACCGCATAAAAAA          CGGGCCAATC GTTA GACTGGCCCG           TTTCTGATGGCAGTG 100 62
CLC90_RS01390  329032 ..  329050 -  -4.5  -3.16603   AGCATAGCAAAATGA             CAACCTC TGCGT GTGGTTG             ATGCGGTACCGCCGC  51 41
CLC90_RS01385 NONE
CLC90_RS01380  327819 ..  327842 -  -2.3  -3.53012   GTTTTCTCTCTTAAA          GGC-CGCCGG TTATT CCGACTCGCC          GTATTTAAATTTGAT  47 11
        hslO  326888 ..  326908 - -12.6  -2.68304   AAACAGCAGGAGAAT            CGGGCACA GAAGA TGTGCCCG            TAAAGGACAGAAAAA  88 41
        pckA  325064 ..  325086 - -13.5  -3.67976   GTTATTAACCGGAAA           GGGCACGAA TAGAT TTCGTGCCC           TTTTTGCATTAGCGT 100 47
CLC90_RS01350 NONE
CLC90_RS01345 NONE
CLC90_RS01340 NONE
CLC90_RS01335 NONE
CLC90_RS01330  315409 ..  315429 - -18.3  -5.64274   TGATGCAGAAAAAAA            GCGCCGCTG ATA CAGCGGCGC            AGCAGAACTAGCGTT 100 33
CLC90_RS01325 NONE
        feoB NONE
        feoC  311810 ..  311833 -   -14  -4.11404   TTTAGATGACAGAAA          GGTGATGTCA TTGC TGACATCACC           TCTTTTTTTAGCAAA 100 63
        gntX  309707 ..  309718 -  -3.6  -3.21593   TAGTCGGTTATAATA                CGCC CATT GACG                 TCGTGACTACAAGGT  48 32
        nfuA  308957 ..  308983 - -12.3   -5.0809   AAGAAAGCATAAAAA         GGGGAGCCGAT GGGTT ATTGGCTCCCC         GTTTGGTTTTCATCA 100 132
        malT NONE
        glpE  300917 ..  300938 - -11.6  -2.92175   GGGCAAGAGATCAGA           CAGAGGCC GGAAAT GGCCTCTG            CATAGGAAAAGAACG  83 45
        glpG NONE
CLC90_RS01265  298983 ..  299001 -  -3.3  -2.57423   AGATCGACGAAGCGA             TATTTAT TGGTG ATAAATA             GTGTCGAAATAATAG  42 117
CLC90_RS01260  297083 ..  297108 - -13.5  -3.05384   TCTCTGTCCACTTAA         TAAACCCTTTC ATTT GAAAGGGTTTA          TTGTTTGGTTTGTCG 100 156
CLC90_RS01230  285102 ..  285115 -  -6.7  -3.68677   AACTGAAAAAAGACA               TTCCG TTAC CGGAA                ATTGAACAATTATTG  63 341
CLC90_RS01220  283105 ..  283116 -  -2.2  -4.09864   ATGCAGCGTTTAAAA                GCTCG TGC CG-GC                CATTTTATGCCGACA  55 327
CLC90_RS01210  280793 ..  280805 -  -5.5  -3.30635   CAAATTGGGGCAGAA                CGGCT AAT AGCCA                AACTGCGTGGCGAGT  54 262
CLC90_RS01195  278157 ..  278167 -  -5.4  -2.57795   CTCATCATCAATTCA                 CACT GTG AGTG                 ACTATTTTGTCGGAC  49 224
        leuE  277469 ..  277489 -  -8.3  -2.59431   TTGTTGGACAAGTCA            TGGCGTC TGATTAT GACGCCA            TGTTTACTGGCAGAT  63 42
CLC90_RS01180  274254 ..  274273 - -11.4  -5.28481   TAGCCAACTAAAAAA            GGCGACCC GATA AGGTCGCC             TTTCTATTTGTAGTC 100 63
        uspA  272760 ..  272777 - -12.7  -4.26188   GTTATATATGTAAAA             CGCCTGC ATAG GCAGGCG              TTTTAAGTAAATACT 100 55
CLC90_RS01165  271035 ..  271061 - -11.6  -4.15222   ACTTTCTCTAATAAA         CCCCGCTATTCC AGA GGAATAGCGTGA         AATGATTAGAGAAAG 100 182
        rlmJ  267065 ..  267078 -  -3.9  -2.60512   TGGAAGACGAAGGGA               GTTTA GCGT TAAAC                GATGATGAAAAATGC  44 136
CLC90_RS01145  265464 ..  265493 - -13.6  -3.33815   ACTTTTTTTAATCAA       CTCAGCCGGAAG AAATAA CTTCCGGCTGTG        ATAGATCCGACTTTG 100 129
CLC90_RS01120 NONE
        yhjD  256101 ..  256119 -  -5.9  -3.44146   TGTGGTGAGAATCAA             TCGGCGC TATGC GCGCGGA             ACAGGTGGGTTTTTA  59 13
CLC90_RS01110  254965 ..  254983 -  -2.3  -2.68361   AAACCGATAAGGAAT             GGGCGCT GGTGA AACGCTC             TGATGCCTGTGCTGC  39 247
CLC90_RS01100  253625 ..  253651 -    -3  -2.94218   ATTTTTTATGACACA        GGTCGGGAAAC AGATAA GTTTCCCG-CT         ATTTCATTAGTCATT  44 39
CLC90_RS01095  252488 ..  252516 - -15.4  -2.69601   CGCACAGTAAATTGA       CTCAATCGGGGCC TTTG GGCCCCGAT-GAG        TTTCCTACGTAAAAC 100 64
        bcsE NONE
        bcsF NONE
        bcsG  232708 ..  232731 - -11.8  -4.68724   TCATTCAATATAAAA          CAGGAACGTA ATTA TACGCTCCTG           TTTATTGTAGATGAT 100 54
CLC90_RS00975  217386 ..  217398 -  -4.8  -3.78775   CGTGCCATGAGCAAA                GAGC AGGTG GCTC                GTTTAACCTTCCCGG  57 415
CLC90_RS00940 NONE
CLC90_RS00935  207505 ..  207523 -  -6.7  -4.99035   CTAGCCAGAGAAAAA             GCCCTTA AACGG CAAGGGC             GAAGTGGTGAGAGTC  86 86
CLC90_RS00915  201948 ..  201980 - -14.3  -3.14463   AAGCTGGGGTAGCAA     TGCGCTGGA-TCGC GGTGTG GCGACTCCAGCGCA      GGAATAGATTATTCA 100 34
        fdhD  191033 ..  191043 -    -4  -3.14888   AATGATATTGAAAAT                 GATT ATC AATC                 CCATATTAATAGTAA  49 45
CLC90_RS00865  190239 ..  190261 - -16.4  -4.96848   CGGCGGATATAAAAA           TGCCAGCAAG TCA CTTGCTGGCA           GGGTCTTTAGCAGTA 100 79
CLC90_RS00860  187919 ..  187943 - -13.6  -3.40073   ACGGTGATGAAGTAA          CGGGAGCGAC TGGAT ATCGCTCCCG          TTGTCGTTTGAGTAT 100 40
CLC90_RS00855  187057 ..  187084 -  -7.8  -4.45168   GCGGTAAAACAGAAA        CCGGGTTGATG CTAGTGC CATCA-CCCGG        TTTTTTCTTTTCTTT  82 66
CLC90_RS00830 NONE
CLC90_RS00825 NONE
CLC90_RS00820 NONE
CLC90_RS00815 NONE
CLC90_RS00810  175841 ..  175853 -  -2.7   -3.5944   ATTCAGACTGCCAAA                CATCA AGC TGATA                CCGCGCAGGCGGCAT  49 424
         tag NONE
CLC90_RS00780  169746 ..  169764 -    -6  -3.27744   AAAATAAATGCAAGA             CTGACTTT AAT AAAGGCAG             GGTTGATGATAGCAA  57 294
CLC90_RS00775  167478 ..  167492 -  -8.6  -4.19336   AACTATTTTAATAAA               CCTTCA TCA TGAAGG               ATCCTGAAATTGGAA  79 17
CLC90_RS00770  164888 ..  164901 -  -3.8  -2.81316   TTATCAGCGAATAAG               GCAC GGCAAT GTGC                AGAGTTGAGGGGGGC  45 81
CLC90_RS00765  163856 ..  163908 -  -3.7  -2.52676   TACCGGTGCAACGTA TCGTCA-ATTCTGCCTACTGCGTGA AAACA CCA-GCAATAGGCAGAATATCAGGA TAATACTTGGTATTG  44 146
CLC90_RS00760  162465 ..  162487 -  -7.7  -5.93252   GCTAAAAATAAAAAA           GGACAACGG GAGAT CTGTTGTCC           TTTTCTCGAGAATAA 100 71
CLC90_RS00740  158699 ..  158709 -  -8.2  -3.07935   AGCTGACGGAGCCAA                 CGGC AGA GCCG                 CCATCTGGCGATGCG  63 156
        rpmH  149268 ..  149290 -  -2.1  -2.66272   CCCTAGGGAAAGCGA          GCTTAACC-AC TCA GTCGGTTA-GC          TTTATTACTTAGAAA  40 30
CLC90_RS00695 NONE
        yidD NONE
        yidC  146996 ..  147025 - -10.7  -4.73388   AATTTCTACTAAAAA       GAATAAGGCGGTC AATT GACCGCCTTAGGC        TATTAATACAGATGA 100 54
        mnmE  145336 ..  145354 -    -3  -3.88442   CAAAATATTATCAAA             CCAGTGAC AGA GTCTCTGT             TGGTAGTATTAATGC  54 255
CLC90_RS00525  111565 ..  111596 -  -7.3  -5.63517   GGTTTAAATAAAAAA      GAAACAACCCGAC GATGAT GTCGGGTTGCCTG       ATAAAACTATCGGGT 100 55
CLC90_RS00505  105971 ..  105984 -  -6.7  -3.01712   TTTTTTGCTCCAACA               GCGAA ACGT TTCGC                TGACTAAGAGTTTAG  58 211
CLC90_RS00500 NONE
        rbsA NONE
CLC90_RS00490 NONE
        rbsB NONE
CLC90_RS00480 NONE
        rbsR   99614 ..   99626 -  -7.7  -3.58037   TATTAATGGCTGAAA                TGCAG GCG CTGCA                TGATGAATTTGACCG  66 433
CLC90_RS00465 NONE
CLC90_RS00460   96817 ..   96854 - -10.9  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTT GTTA AAGTCATCTTTAAGATA    TTCAGGTGATAATGT  83 59
CLC90_RS00455   93607 ..   93617 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 12
         rrf   93357 ..   93377 - -10.4  -4.84527   CGCACATAGCAAAAA            CCCCACGC TTTTG GCATGGGG            TTTCGGCTTGATTTG 100 43
CLC90_RS00435   91546 ..   91559 -  -3.1  -4.93898   ATATCATTAGAAAAA               TAACG TCGA CGCTA                AGTCCCATTACTGAT  71 33
CLC90_RS00430 NONE
        dsbA   89808 ..   89821 -  -9.5  -5.42259   TTATCCGTAAAAAAA               CCGGC CGAA GCCGG                TTTATTATCACTGCG 100 47
        polA   86138 ..   86164 - -18.1  -5.24531   AGCGCCCATAAAAAA         CGCCCCAGTCA ATAAA TGACTGGGGCG         GCTAAATATTCAGCC 100 247
        yihI NONE
CLC90_RS00405 NONE
        hemN   82145 ..   82155 -  -2.4  -3.66256   GACAGTTGGAAAATA                 CCTG TCG CTGG                 CTAACGGTCATGGCG  50 388
CLC90_RS17220 NONE
        fghA   79613 ..   79625 -  -5.5  -3.14132   GGCTCTCTGGACGAA                GCGCT GGC AGCAC                TGAGCGAAGATCGTG  52 179
CLC90_RS17635   78264 ..   78277 -  -2.4  -5.15969   TTTTAAGCTAAAAAA               GTCT TGTTAT AGAC                AAAAATGGCAGCTAC  73 460
CLC90_RS17620 NONE
        typA   76074 ..   76105 - -10.3  -6.01369   GAAAGAAGAAAAAAA      GA-ACTCAGGGCGA GAATG TCGCCCTAAGTGTC      TGTTATAGCTTAAAA 100 45
CLC90_RS00375   75340 ..   75363 -  -9.7  -3.80551   CAAATACCGAGGAAA          GGGTTAACA TTAAGG TGTTAACCC           GTGATCTCATTAGGA  84 35
CLC90_RS00370 NONE
         dtd NONE
CLC90_RS17605 NONE
CLC90_RS00360   72729 ..   72742 -  -3.1  -4.08767   GCCACGCCTTTAAAA               GCTCAC TGA GTG-GC               ACGTTAAAGGCGACA  58 237
CLC90_RS17590 NONE
CLC90_RS17585 NONE
CLC90_RS17580 NONE
CLC90_RS17575 NONE
CLC90_RS17570 NONE
CLC90_RS17565 NONE
        gltS NONE
CLC90_RS17560 NONE
CLC90_RS17555   67099 ..   67111 -  -3.3  -2.60512   CGCAACAGGAAGCGA                TAGCC AGC GGCAA                AGTCTCAATGGTAGT  42 321
CLC90_RS17550 NONE
CLC90_RS17545   65908 ..   65926 -    -3  -2.72511   CTCAGGTTGCCAAAC             GCAAAGGG CTT CCCCCTCC             CCATATTGATGAACA  42 164
CLC90_RS17540   65151 ..   65167 -  -3.8  -3.90112   TGCTGCTGAATCAAA              TATTCA AAGCA TGAATA              CTGAGGAAAAGGATG  57 67
CLC90_RS17535 NONE
CLC90_RS17530   63433 ..   63448 -  -3.2  -3.11072   GTCATTGAAGATACA              CCTGCT ACTT ATCAGG               ATATGGAGCAGTTAT  46 174
CLC90_RS17520 NONE
CLC90_RS17515   62270 ..   62290 -  -8.3  -4.25283   AGTGGGGCAGGAAAA            TCAAGCCTG ATT CAGGCTTTA            CTGAAAACACAACCG  82 274
        ligB   60173 ..   60189 -  -2.3  -3.47029   GTATTCAAATATGAA              CATCA GGACCAT TGATG              CTATACAAACAATAG  47 55
CLC90_RS17500 NONE
CLC90_RS00305 NONE
CLC90_RS17495 NONE
CLC90_RS17490 NONE
CLC90_RS00295   56181 ..   56202 -    -3  -3.18274   TCTATGCCAAGCCAA           TGCCCGCAG AAGAA CTG-GAGCA           TTGGCTGAGCAAATA  46 82
CLC90_RS17485 NONE
CLC90_RS00280   51929 ..   51949 -  -4.7  -5.80003   TCAATAAATAAAAAA           CCCGCAGT AATAGA AC-GCGGG            TTTTTTATTTTTGAG 100 51
CLC90_RS00270   50166 ..   50183 -  -8.4  -5.24531   ACCGGGCATAAAAAA             GGCGAC TATTTC GTCGCC              CTAATAAAATTATTG 100 35
CLC90_RS00265   49209 ..   49222 -  -9.5  -4.92239   CCAAAAATGCAAAAA               GGGCC GTTA GGCCC                TTTGAGGTTAATGAC 100 237
CLC90_RS00245   45925 ..   45939 -  -6.4  -3.76373   TCCCGAACAGCTAAA               GATCCC GAA AGGATC               GAGAAAATATCTCTA  65 38
CLC90_RS00235 NONE
        rpmG   45239 ..   45254 - -11.8  -5.60689   TTATATAACAAAAAA              CCCGGC CGAG GCCGGG               TTTTTAATAATCCAC 100 46
CLC90_RS00225   44305 ..   44316 -  -5.8  -4.25256   TCTCTAGTAAAAGAA                GTGG CGCG CCAC                 GGCGGTGATATTACT  70 91
         kbl NONE
CLC90_RS00185   35707 ..   35729 -  -9.9  -5.52986   AGCTGAGTAAAAAAA          TGCCGGGTGA TTAT TC-CCCGGCA           TTGGCTCACTAACGG 100 61
CLC90_RS00165 NONE
CLC90_RS00160 NONE
        secB NONE
CLC90_RS00150   29096 ..   29128 -  -9.9  -4.08706   TCCCTATGACATAAA      CAAGCCACCCCAAGG GAA CCTCAAGGTGACTTA      GTACGCATTAATCCT  88 46
CLC90_RS00145   28082 ..   28093 -  -2.2  -5.21709   CTGCACAGCAAAAAA                TCAG GATT CCGA                 TGCAACCGAATAGTC  76 181
CLC90_RS00125   24777 ..   24795 - -14.6  -6.32216   ACAGATAAAAAAAAA             GCCCTCCA TCA TGGAGGGC             GAAAAGACAGGGATG 100 83
        fieF   23818 ..   23829 -    -3  -2.90813   GACGGTGTGAAATTA                CATT TCCC AATG                 CGCATGACGCGCTTT  44 11
        pfkA   22573 ..   22596 -  -4.5  -4.87318   CCTAAAATGCAAAAA          GCCCCCG GAAATGTGAA CGGAGGC           TTTTTCAGGCAAGAA  74 48
CLC90_RS00110   21403 ..   21416 -  -9.5  -4.74706   CGTAACACGCAAAAA               CCCCG GCAA CGGGG                TTTTTTATGGCCTAA 100 53
CLC90_RS00095   19250 ..   19266 -  -6.5  -5.06451   TACCAGCGTAAAAAA              GGGCG TGGCCTG CGCCC              TATTCTTATTTTTTC  87 47
        emrD   16671 ..   16683 -  -4.8  -3.20361   AAAATGGGAATTGAA                GCAC GCAAG GTGC                TGCATCTAGACGATA  50 302
CLC90_RS17285   12938 ..   12956 -  -5.3  -3.62522   TAACTCGCGTAACAA            GCGCTGTT GTTT AAC-GCGC             CTCCGTAAACAGCGA  59 106
        zapB   12512 ..   12531 - -12.2  -3.95153   CGAACCACGTAGAAA            GGGCGATA TTGA TATCGCCC             TTTTGCTATGACATC 100 77
CLC90_RS17275    9704 ..    9721 -  -3.3  -3.92659   TTGGTAAAACCGAAA             TCGCCCG TCGC CTGGCAA              AATTGGCCAACGCAC  56 269
CLC90_RS17260    5908 ..    5922 -  -2.8   -3.3506   CCGAAACTCCGATAA               CACG CATCGAT CGTG               ATACTACCAGCCGCA  47 122
CLC90_RS17255 NONE
CLC90_RS00020 NONE
CLC90_RS17250    3632 ..    3648 -    -8  -2.53273   CCAAACGATGAAGAT              CTGCGT AAAGA ACGCAG              TGATGAAATTCCTGA  57 258
CLC90_RS17235 NONE
CLC90_RS00010    1653 ..    1663 -  -2.4  -2.58544   GTTCATGCTGATAAC                 GCCG CAG CGCC                 TGTTGTACCTGGTGG   0 258
