        recF NONE
        gyrB    6228 ..    6250 +  -9.9  -5.76633   TTTGCGTGAAAAAAA          CCGGAG-CAG GTGA CTGTCTCCGG           TTTTTTTATGTCTAA 100 44
        yidA    7293 ..    7312 +  -8.6  -2.92157   ATATAGATTTAAAGC            GT-GCTGGC GGA GCCAGCGAC            TCTGTGAGGTTAATG  65 45
ND012_RS00030    8673 ..    8694 +  -9.5  -2.70528   TATTTACGGTTGAAG           CCGGTTAGT GATG ATTAACCGG            TAATCTCTGGATAAT  68 18
        ibpA    9833 ..    9857 +  -2.9  -2.87564   TTATTATTTAATATT         TTGGCTTGCC GTAATA GG-GAGCCAA          TCTGTCACGGGCTAA  42 68
        ibpB   10496 ..   10524 + -12.6  -3.31175   CAATAATTGTCTTTC       GCGCCAGA-AACA TTCC TGTTCTCTGGCGC        ATTTTGTGGTGTATC  95 108
ND012_RS00050   12334 ..   12356 + -10.6  -4.37886   GCTAAAAATAAAAAA           GGACAACGGG AGA TCTGTTGTCC           TTTTCTCGAGAATAA 100 58
ND012_RS00085   21954 ..   21996 +  -2.7  -4.71418   TACCTAAATAAGGTC GCTGAACAGGCCTTGTC AGCAAACAA GATGAGGTAAGTTCAGC TTTATTTTACATATT  64 101
        glyQ NONE
        glyS   25194 ..   25223 +  -7.2  -3.60112   CCAGTTTTCGGCCAA       G-GCAAAGGGGGA TAAAT TACCCCTTTGCAC       TATTCTTATTGATTC  68 42
ND012_RS00100   26180 ..   26198 +  -3.1   -4.7497   TTGTCCAGATAAGAT             CTGTGCC GAATA GGTATAG             TTTTTGGTGACTAAA  68 185
ND012_RS00135 NONE
ND012_RS00140   35353 ..   35374 +  -7.9  -2.54896   TACCTACTTTTTTAC           TCTCCCGGC ATGA GTCGGGAGC            TGAATTCCGTGGCGG  60 60
ND012_RS00145   36456 ..   36476 +  -2.5  -2.76009   CATCCTGATACACTA            TAGGTGATA TCC TATCCCCAA            CTTTAGCGAATTTTC  42 313
ND012_RS00150   36905 ..   36932 +  -7.8  -5.95449   GCGGTAAAACAGAAA        CCGGGTTGATG CTAGTGC CATCA-CCCGG        TTTTTTCTTTTCTTT 100 50
        fdnG NONE
        fdxH NONE
        fdoI NONE
        fdhE   47508 ..   47524 +    -3  -3.32536   TCCATTCCTGTTCCC             TGGCGAG TAAC CTC-CCA              TTATCAGCCTGATTT  47 16
        selA   48912 ..   48922 +  -6.8  -3.00353   TGACGAAGACGCATT                 GCTC AGG GAGC                 TAGTTTCATGATTAT  58 4
        selB   50803 ..   50813 +  -3.2  -2.91264   TCAGTTAACTGTTTG                 CCTG CGT TAGG                 TATATCCATAGCAAG  44 33
ND012_RS00205 NONE
ND012_RS00215   54356 ..   54369 +  -3.9  -3.20491   TAGTAATATCTCCTA               CTATT CGAA AATAG                ATTATTTATTTACTA  48 107
ND012_RS00220   54807 ..   54820 +  -3.1  -2.56596   AGTTACTAGCGGAAA               TCC-CC ACG GGAGGA               TGGATTCATCAAAAG  42 284
ND012_RS00225   56052 ..   56073 + -15.9  -3.27012   TAAAATTAGCATAAC           GCTCAGCCC GCAG GGGCTGAGC            TGTTGTAAATGCTTT 100 27
ND012_RS00230   57103 ..   57122 + -12.2   -2.7898   TCCTGTAAAAGACAA            GGGACATC CGAA GATGTCCC             TAATTCAGTATTAAC  83 33
ND012_RS00245   60325 ..   60342 +  -3.5  -4.29187   GTATTGAAGAAGGTA             TGACATT CGAA AATGTTA              TCTTTTTTAGTTATC  63 369
ND012_RS00250   62796 ..   62815 +  -9.3  -5.86061   TCCATTCGTAAAAAA            GCGGCAA TTTTAT TTGCCGC             TTTTTTTTGATGAAG 100 357
        hutU NONE
        hutH   66477 ..   66503 +  -9.4  -2.87564   AATAACAGACTATAT         GGGTGATTCCGT TGT GTGGCATCACCC         TCTCTGACCCCCTGC  70 44
ND012_RS00265   67959 ..   68003 + -14.5  -2.99097   AAAAGCTTATCGCAA TAGATATCCAGCAGGTGGT CAGCGCT ACTGCCTGCTGGGTGTCTA TGTAATATTATTATT 100 39
ND012_RS00275   70477 ..   70490 +  -2.3  -6.02914   GGTTTTCACCTCAGC               CTCCT TTTC AGGCG                TTTTTTTTATGTAGA  90 199
        eptB   72465 ..   72476 +  -5.8  -2.83964   TCCGGTTTCCTCTCC                GCAG TTTA CTGC                 TGCTGTTGTATACTC  53 76
        uhpA NONE
        uhpB   74661 ..   74677 +  -2.9  -4.15044   TTCCCGATTCATGCA              GGAAAGG TGC CCGTTTC              TTTCTTACGCGCGCG  57 47
ND012_RS00295 NONE
ND012_RS00300   76285 ..   76304 +   -10  -5.48825   GACCACATTTAAGAA            CCCTGGCT TTTT AGTCAGGG             TTTTTTTCGATCATC 100 36
ND012_RS00305   78529 ..   78550 +  -6.5  -3.32727   AACGCCGTTTATGGA           TGAGGGGGC TACG GTACCCTCA            TTGATCTGGTGTTCC  59 47
        dppB NONE
        dppC NONE
        dppD NONE
ND012_RS00325   82694 ..   82718 +  -8.6  -5.24129   ATAAGAGCTAAAAAA          GCACCGATGA GTTAA TAATCGGTGC          TTTTTTATAACCCAA 100 67
        bcsR NONE
        bcsQ NONE
        bcsA NONE
        bcsB NONE
        bcsZ NONE
        bcsC   97110 ..   97123 +  -5.2  -4.61527   TAATGCGGGCTTTAT               CGGC AAATAA GCCG                TTTTTCGGCAATTTT  73 44
        hmsP   99335 ..   99346 +  -4.4  -4.18948   TTTTTCGGTCGAAAA                GAAG TCAC CTTC                 TTTCATTATTTCTCT  61 46
ND012_RS00380  100957 ..  100983 + -14.5  -3.93695   CAGATAATTAATCAG         CCACCGGTAGC TTGTC GTTACCGGTGG         TTTCTGCATAATGAA 100 58
ND012_RS00385  102757 ..  102785 + -15.4  -3.72576   CGCACAGTAAATTGA       CTC-ATCGGGGCC TTTG GGCCCCGATTGAG        TTTCCTACGCAAAAC 100 31
        pdeH  105675 ..  105688 +  -4.5  -3.55444   AGGTTGCCACCTTGG               GCGGA AAGC TTCGC                TTTGAGCGATCAGCG  55 360
ND012_RS00420 NONE
        metC  111217 ..  111238 + -11.6  -2.80935   TTTATGTATCAAACA           GCCGGAAG AAATAA CTTCCGGC            TGTGATAGATCCCAT  81 73
       yrInv  115653 ..  115674 + -11.6  -2.80816   TTTTTAATCAACTCA           GCCGGAAG AAATAA CTTCCGGC            TGTGATAGATCCGAC  81 394
        prlC NONE
        rsmJ  121206 ..  121261 + -11.4  -3.09327   TTACCTTAATCGCGA CTTTCTCTAAT-AAACCCCGCTATTCC AGA GGAATAGCGTGAAATGATTAGAGAAAG TGTTCGCTGGGCTGA  84 32
        uspB  124439 ..  124458 + -10.7  -4.41609   TAGCCAACTAAAAAA            GGCGACC CGATAA GGTCGCC             TTTCTATTTGTAGTC 100 60
ND012_RS00475  127533 ..  127546 +  -2.3  -4.82901   GTAAGCAATAAAGTT               TGCCC GTAA GCGCA                TTTTTATACAACAAA  66 30
ND012_RS00480 NONE
ND012_RS00485  129367 ..  129377 +  -5.4  -3.17195   GATGTGACGCTCGAA                 CAAC GTT GTTG                 TGATTTGTTATATCG  53 137
ND012_RS00490 NONE
ND012_RS00495  131183 ..  131197 +  -2.2  -3.68024   ATAATGGATATAATT               TATAAT ATA GTTATA               TTCTCTATTAACAGG  49 37
ND012_RS00500  131846 ..  131859 +  -3.9  -3.54181   CCTATGGTCTACAAC               TTTCA GTGC TGAAA                TTAATATTTTCCCAT  52 155
ND012_RS00510 NONE
ND012_RS00515  133260 ..  133274 +  -2.2  -3.36505   GGGAGAATAAATAAA               TTATTA ATC TGATAA               TTATAACTGAAATAT  45 27
ND012_RS00520  134387 ..  134397 +  -2.6  -4.76193   TATATTTTTTTATAC                 TTTA ACC TAAA                 TTTTATCTTATAATT  67 66
ND012_RS00525 NONE
ND012_RS00530 NONE
ND012_RS00535  136506 ..  136526 +  -2.5  -3.54638   ATCGAGGTATCAATA            AATGAAGAG TGA CTCTACATA            TTTAGGCAAGGTTAT  48 14
ND012_RS00540  138504 ..  138546 +  -4.3  -3.98053   TAGGGTAACCTATGG GTGAACTGCCACCGAATCATA TGG TATGAC-CAGTGGTAG-TCAC TATTTTATCTTATGC  59 262
ND012_RS00560  141443 ..  141466 +  -8.2  -6.09888   TTTCTCGGCTAAAAA          GGGTATG-CGC ATC GCGTTATACCC          TTTTTTTTGTTAAAA 100 101
        gntR  142592 ..  142606 +  -3.4  -4.07568   CTGACAAACCTCGCT               CCTGCG ATC TGCCGG               TTTTCACCGCGGCGA  56 105
ND012_RS00575  145126 ..  145141 +  -7.5  -4.43173   TGTTATTAACCTCAA              GGGCC AATACC GGCCC               TTTTGCATTATTTTT  78 128
         asd  147147 ..  147171 +  -7.1  -4.91712   CGCTCAGAATGATGA          GAGGTTGTCGT GTA GCGGCAACCTG          TTTTTATACGTTGAA  89 63
        glgB NONE
        glgX NONE
        glgC  154814 ..  154843 +  -4.1  -2.66733   AAGCTATAACAACAT       CCTGGGTTGGCGT GAAA ACGGCAGCCCCGA        TCGTGTCGCTTAAAC  45 32
        glgA NONE
        glgP  158837 ..  158868 +   -14  -4.15066   TATTCTCTGTCCACT      TAATAAACCCTTTC ATTT GAAAGGGTTTATTG       TTTGGTTTGTCGATG 100 48
        malP NONE
        malQ  170713 ..  170741 + -11.7  -4.23781   CAAGAAAGCATAAAA        AGGGGAGCCGATG GGT TATTGGCTCCCCG        TTTGGTTTTCATCAC 100 81
        bioH  173015 ..  173025 +  -2.4  -2.57211   TCGCCGTTGGGGGAG                 GGGG TAT CCGC                 GTTATCCCCAACGGT  40 48
ND012_RS00670  173565 ..  173592 + -11.4  -5.40474   ATTTTAGATGACAGA        AAGGTGATGTCA TTGC TGACATCACCTC         TTTTTTTAGCAAAAT 100 44
        greB NONE
        ompR NONE
        envZ  188049 ..  188071 + -13.5  -4.74504   GTTATTAACCGGAAA           GGGCACGAA TAGAT TTCGTGCCC           TTTTTGCATTAGCGT 100 78
        nudE  195249 ..  195272 + -12.4  -3.96624   TAACCGCATAAAAAA          CGGGCCAATC GTTA GACTGGCCCG           TTTCTGATGGCAGTG 100 30
        pilM  198828 ..  198839 +  -4.4  -2.95177   TTCGCCCGGTAGATG                CTGA TGTA TCAG                 GTTAATTTTTTGCCG  47 9
ND012_RS00775 NONE
ND012_RS00780 NONE
ND012_RS00785 NONE
        hofQ  201878 ..  201906 +  -4.6  -3.51032   GGTTTCAGTTTAGGT       CCCGCC--GCTGAT TTG ATTGGCGGGGCGGG       TTATCATTAACGAAT  55 307
        aroK  202448 ..  202459 +  -4.4  -2.80939   ACCAGATCATTAACA                TGCT GGAA AGCA                 ATTGATTTTGGCATT  46 9
        aroB  203715 ..  203743 +    -6  -4.67011   CAGTCAACTTAATCT       GCCGAATCGTTGC TGAA GCAACGG-TAGGC        TTTTTGCCTCGAGTT  75 118
ND012_RS00805  204766 ..  204777 +  -3.6  -3.34517   ATCATTCTTATCTGT                GCGC TGAT GTGC                 TGTTTGAAACAGAGT  49 41
         dam NONE
         rpe NONE
ND012_RS00820 NONE
        trpS  208171 ..  208195 +  -8.6  -3.53091   CCATTGCCAGCAAAA          CCAGGGAC ATGTATTGC GTCCCTGG          TTTCAGACGGCGGAT  71 69
ND012_RS00850  215269 ..  215280 +  -7.2  -4.83169   TGCTGTCGCCAGCGC                GGCG TGAA CGCC                 TTTTTCTGCCACGAT  83 181
ND012_RS00860 NONE
ND012_RS00865  219287 ..  219314 +   -12  -4.43909   TACGTGCTAAACAGG        GGCGTGGCAGGT TGAA ATCTGCGACGCC         TTATTTTCTTGGGGT 100 52
        ppiA  222924 ..  222937 +  -3.8  -3.96148   AGTTTTACCTTAATT               GACG AACATC CGTC                TTTGTAATAAGCAGA  58 28
ND012_RS00885  223865 ..  223888 +  -2.5  -3.29251   AGGTCATCAATTATT          GGATAATTT CCTTAA AAATTAGCC           TGTTGTGAATGTTTC  46 4
ND012_RS00890  225282 ..  225298 +  -9.4  -5.15634   AATCGGAAGATTGAA              GGGAGG TGGTT CCTCCC              TTTTTTAATCAGCTA 100 70
ND012_RS00905  229211 ..  229227 +  -2.1  -4.64657   TTTGACGTTTCGTCC              GTGCTGC TCT GCCGTGC              TTTTTGCCGATTTCG  63 396
ND012_RS00950  236708 ..  236732 +  -4.9  -3.89614   GGCGACACTATTGGG          TAACAGACCGG TTA TCGGTCTGAGA          TTTCTGAAGATTAAC  59 96
        kefG NONE
        kefB NONE
ND012_RS00980 NONE
        slyD  244432 ..  244449 + -12.7   -3.9392   ACGCGTCAATAAAAA             GCCAGCC GCAA GGCTGGC              TTCTTTGCAATACCA 100 47
        fkpA  245819 ..  245843 + -13.6  -4.96848   TCTGACCATTAAAAA          CCGCTGCGAA TTATT TTCGCGGCGG          TTTTTGTATCCAGCA 100 55
ND012_RS01000  246757 ..  246769 +  -4.7  -3.91332   CTGATAGGACATGAA                CGCTG ATG CTGCG                TTATTGTCTACTGGT  61 20
        tusD NONE
        tusC NONE
        tusB NONE
        rpsL NONE
        rpsG  248897 ..  248913 +    -3  -2.83715   CGTTCGCCCACTACC             GC-TGGT AATC ACCACGC              TGTAGTCATGCTAAC  43 18
        fusA NONE
         tuf  252389 ..  252404 + -11.8  -5.71712   CTGATTAAGTTAGAA              GGGCGC TCAG GCGCCC               TTTTTTTATATAAAA 100 49
         bfd NONE
         bfr  253661 ..  253675 +  -5.6  -3.68024   TACTTCTGAACAATA               CTCCCG ATT TGGGGG               TTATATGTTGAACGA  61 448
        rpsJ  254068 ..  254082 +  -3.5  -2.72379   AGACGTGCAGATCAG               CCTGG GTTAA TCAGG               TCATTGAGCGATTGA  44 16
        rplC NONE
        rplD NONE
        rplW  255669 ..  255680 +    -3  -3.12668   AGTCGGAGGAGTAAA                CAAT GGCA ATTG                 TTAAATGTAAACCTA  46 40
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  258743 ..  258769 + -13.9    -5.252   CCAACTCGCATAGAA         TAAACGGCTCA GAAAG TGAGCCGTTTA         TTTTTTCTACCCATA 100 49
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH  260864 ..  260874 +  -3.2  -2.60075   TGGTGGCGAGATTAT                 CTGC TAC GTAG                 CTTAATTCGGGAGGA  42 10
        rplF NONE
        rplR  261774 ..  261784 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  47 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ  264447 ..  264476 + -12.3  -4.60797   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTGACAG 100 55
        rpsM NONE
        rpsK  265316 ..  265332 +  -4.3  -4.42851   GTCCGCCGAAAAAGC              GCCGCGT ATA ACGTTGC              TTTTAGGTTTGTTGG  66 15
        rpsD  265962 ..  265980 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  77 10
        rpoA NONE
        rplQ  267440 ..  267453 +  -9.5  -5.42862   AAACGCGTAAAAAAA               CCGGG CTTG CCCGG                TTTTTTTACGCCTAT 100 46
        zntR  268403 ..  268421 +    -3  -4.57569   TCATTGTTCGGAGGA             CAGCAGTA TCA TTCGGCTG             TTTTTCAAACAATAC  63 60
ND012_RS01195  268805 ..  268818 +  -4.5  -4.56775   GGTGCCGGTGGCACC               GCAGG TTCT TCTGC                TTTTTCACGACGCAT  71 166
        dprA NONE
ND012_RS01230  275267 ..  275283 +  -5.1  -2.62184   TGAAGTGAATGAGGG              CTACCTG CAC TAGGTGG              TAGTATGAGAGCAGA  49 13
ND012_RS01235 NONE
        tsaC NONE
        aroE  277593 ..  277607 +   -10  -3.85817   ATTTCCTATCGTGCA               GCCATG AAG CATGGC               TTTATGCCCGACGGT  79 354
ND012_RS01255 NONE
ND012_RS01260  280216 ..  280253 + -10.9  -3.45839   ACATTATCACCTGAA   TATCTTAAAGATGACTT TAAC AAGTCGTGTTTAAGATA    TTGCTCTTTAACAAT  83 59
ND012_RS01265  283453 ..  283463 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGTGTTTGAGAG  82 30
         rrf  283691 ..  283711 + -10.4  -4.84527   CAAATCAAGCCGAAA            CCCCATGC CCAAA GCGTGGGG            TTTTTGCTATGTGCG 100 43
        gltP  290310 ..  290339 + -10.8   -5.3236   ATAGTTTGGGCTGAA       CCCGTTATTTGC CAGAGC GCGAGTAACGGG        TTTTTTATACATTAT 100 47
        yedE NONE
        yedF  292395 ..  292407 +  -4.8  -3.41807   ATTGATAAAACAGCA                TGCC GCTTG GGCA                TTCACTTTGTTTCGG  55 401
ND012_RS01305 NONE
ND012_RS01310 NONE
        neuC NONE
        neuB  297657 ..  297667 +  -5.4  -3.09516   AAGTTATGCCGCTGG                 GGAT TTA ATCC                 TTGAGTAGTAAGCCA  53 7
ND012_RS01325  298281 ..  298292 +  -5.8  -2.76263   GGAAGAGATGCTATG                CGGT GAAA ACCG                 TAATTAAATAGTCAC  53 3
ND012_RS01330 NONE
ND012_RS01335 NONE
ND012_RS01340 NONE
ND012_RS01345  301785 ..  301795 +  -6.8  -3.81748   TGGACAGAATATCGT                 CGTC GAT GACG                 GTTTTTCTTTATAAG  67 1
ND012_RS01350 NONE
ND012_RS01355 NONE
ND012_RS01360 NONE
ND012_RS01365 NONE
        hisH NONE
ND012_RS01375 NONE
        fnlA NONE
ND012_RS01385 NONE
        wecB NONE
ND012_RS01395 NONE
ND012_RS01400  313148 ..  313171 + -11.7   -3.2964   ATTGTACGTGAAAAA          TCCCGCTCG CATTAA CGGGCGGGA           TTGTCAAGAGCCTTT  86 91
        fxsA  320155 ..  320176 +  -2.4    -3.794   TTTGTCTCATTTAGG           CAGAAAAA TTAAAT TTTTTTTG            TTTGCTCCCTTGAAG  51 128
ND012_RS01440 NONE
        groL  322331 ..  322352 + -10.1  -5.69793   AGCTATAAACCTAAA           GCGAGTGGG GAAA CCTGCTCGC            TTTTTTCTTTCCTGT 100 76
ND012_RS01450  323074 ..  323106 +    -5  -4.88736   GCTGAATAAGATCAA     TA-ATCAGGAGATGC CAAG GTATCTCCTGACCTA      TTTTTATGGCTAATC  74 62
         efp  324817 ..  324855 + -10.4  -3.85567   CAGTTAATAAATAAA   GAACCCCAATAATTGAGT GGT ATTCGAATATTGGGGCTC   TTTACGTTTCCCATT  86 90
        sugE  332493 ..  332511 +  -2.4  -3.89346   GTAATGAGTGTGGCT             CTTGATTG ACC CAAATAAG             TTTATCCACTGGGAA  51 151
        epmA  338037 ..  338064 +   -15  -3.86822   TGTCAGCAGTCTGAA        GAGCCTGATTCT TTAG GGAATCAGGCTC         TTTGTCCAAAAATTA 100 99
         orn  344270 ..  344288 +    -6  -3.17392   GGCAAAAAGCACACA             TTGCTGAT TTA ATCAGCAC             TTGAATTAAAAAATG  55 161
ND012_RS01550  344518 ..  344539 +  -3.7  -2.94099   GGCAGAAGCTAACAA           TGTCGGTGA GCAC TCACTAACA            TATGTGATGCGGGAA  46 57
ND012_RS01555 NONE
ND012_RS01560  344923 ..  344935 +  -2.7  -4.50122   TCAATTTTAACCATT                TGTTT TAA AAGCA                TATTTTTTTATGTGA  61 190
         nnr NONE
        tsaE  348248 ..  348271 +  -5.2  -3.94141   TCGATGATGCTGAGC          TGGAGAGGCT TTAT AGCCACTGCA           TTGTTGGTTGTTTCT  63 45
        amiB NONE
        mutL NONE
        miaA  352889 ..  352902 +  -4.5  -3.33696   ACGCAGTTTATTTTC               GAGCC AATA GGTTC                TTAGTTAAAAACAAC  53 91
         hfq  353305 ..  353316 +  -7.2  -4.64657   ATGGCCTTATGTTCT                CCGC ACTC GCGG                 TTTTTACCCGTTTGA  81 85
        hflX  354609 ..  354619 +  -6.8  -3.90112   AGAGCAGGAGCTGGT                 CGAC TAC GTCG                 TTTAATTGACCCGCG  67 10
        hflK NONE
        hflC  357043 ..  357060 + -10.5  -4.78848   GAACGTTTGATACAA             GGCCCGT TAAC GCGGGCC              TTTTCTATTTGAGGA 100 48
ND012_RS01615 NONE
ND012_RS01620  358719 ..  358742 + -16.8  -3.81146   CGCTATCAAAACACT          CAAACCGGGC TAAT GCCCGGTTTG           TTGTTCCTTCGGCAA 100 65
        nsrR NONE
         rnr  361980 ..  361990 +  -3.2  -4.61868   TAATTTAATCAACGG                 CAGG TAA TCTG                 TTTTATCTGTCGATA  65 93
        rlmB  362799 ..  362816 + -11.3  -5.96219   TAAGAATGTAAAAAG             CCAGCTC TGAT GAGCTGG              TTTTTTTTGTCGGTA 100 55
ND012_RS01640  363887 ..  363897 +  -5.4  -3.12668   TAGTTTTTATTTATG                 TAGC ATA GCTA                 TTCCATATAAAAATA  53 130
ND012_RS01645  365077 ..  365092 +  -6.2  -4.84359   TTTAACGTTGGGTTA              CAACAT AAGG ATGTTG               TTTTTATGGAAGTGA  80 485
ND012_RS01650  365850 ..  365864 +  -3.6  -4.14345   TACATATTTTATAGG               TTGTTT ATG AAGCAA               TTTCATTTGATGTTA  60 154
ND012_RS01655 NONE
ND012_RS01660 NONE
ND012_RS01665 NONE
ND012_RS01670  370450 ..  370479 +  -2.7  -3.36878   ATAATAGTGCGCACC       GCTGGCATTGGCC TGAC GGCGGATCTCGGC        TTCTGCATCCATCGG  47 256
        yjfP  371758 ..  371785 +  -2.7  -4.32049   ATGGCAACGATCCGG        TAGGCGGTC-GC TCCAC GCTGATCGGCTA        TTTTGCTGACTTGTG  62 177
        rpsF NONE
        priB  373094 ..  373106 +  -2.7  -3.68351   TTCTGGAGACTAGCC                TAATG GCA CGTTA                TTTCCGTCGTCGCAA  50 28
        rpsR NONE
        rplI  373836 ..  373866 + -14.1  -4.11394   GCGGCTGTTAACCCG       TCAAAACGCCAGC CTCGT GCTGGCGTTTTGC       TTTTAAGGGTACAGT 100 46
ND012_RS01715  375729 ..  375747 +   -11  -5.25799   TTTTTTGAAAAAAAA             GAGCGGTC AGT GATCGCTC             TTTTTCTATTATTTT 100 52
        cysQ  380066 ..  380080 +   -10   -3.8505   TGGCATCATCGGTGT               CGACGA TCG TCGTCG               TTTGGTAATGTTCGT  79 279
ND012_RS01740  380934 ..  380964 +   -14  -4.63527   GCAGTCACGCCAAAT       TAATTGCGGCCCCA TAT TGGGGCCGCTAATA       TTTTTAAGCTAGTCA 100 52
ND012_RS01755 NONE
ND012_RS01760 NONE
ND012_RS01765  389296 ..  389314 + -14.6  -5.60993   TTGAAAATGAAAAAA             CACCGCTC ATT GAGCGGTG             TTTTTTTGTCGAGCC 100 52
         mpl  393210 ..  393221 +  -4.4  -2.57132   ATGGGCTGCTGGTTG                TTGG CACG CCAA                 GTTCTGCGGGAAGAC  44 449
         mdh  394906 ..  394929 + -19.6  -5.60993   TCCTGTATTGATGAA          CCGCCGGTGG TTGC CCACCGGCGG           TTTTTTTATGACGGC 100 92
ND012_RS01800  395780 ..  395794 +  -3.5  -3.06796   ATTCAGATAGCGTTT               CGGGT GCCCG ACCTG               TTGAGTAAAGTAGAG  46 58
ND012_RS01805  396451 ..  396461 +  -2.4  -3.73088   TCATTGCCGCTTGCT                 CAGC AGT GCCG                 TTGTTCATGGCATGT  50 310
        rplU NONE
        rpmA  398075 ..  398097 +   -12  -4.84529   TGCTAATAGATGTAA           GCCCTGCAAT TTT GTTGCGGGGC           TTTTTACATTTCTGG 100 54
ND012_RS01825 NONE
        cgtA  400469 ..  400499 + -13.4   -4.9041   ACTTTGTCATTAACC       CCAAAAAGGCTGCC TAT GGCAGCTTTTTTTG       TTATTTTTTTATGCT 100 199
        greA  404474 ..  404487 +  -9.5  -4.36914   AAAGAAAAGAAAAAA               GGCCG CAAG CGGCC                TTTTATCGGAACAAA  88 79
        rlmE NONE
        ftsH  407697 ..  407714 + -10.5  -5.69262   TTGTGATGAATCTAA             CCCCGGG CTTG CTCGGGG              TTTTTCTTTTTGTCG 100 124
        folP NONE
        glmM  409970 ..  409982 +  -3.4  -3.53224   AATGACTCTATGCGG                GGAA TATAT TTCC                TTTCCCCGCAAAATC  49 39
        secG NONE
ND012_RS01885  410721 ..  410731 +  -3.2  -2.84504   AACTTGCTTTTTTAT                 CGTT ATC GACG                 TAGTATTTGCCACGT  43 52
ND012_RS01890  410829 ..  410843 +  -7.2  -5.78622   TCCGGCCCCCGCAAC               CACTTT CCT AAAGTG               TTTTTTTTCAAATAG 100 24
        rimP NONE
        nusA NONE
        infB  415734 ..  415757 + -12.4  -3.48924   ATCTGCTTATATCCA          TTTGGGGGGC CTTG GCCCCCCAAC           TTGTCTGGAGAATCC 100 50
        rbfA NONE
        truB  417127 ..  417143 +  -5.1  -3.09671   GTGGAATACACAGAG              TAAGCCA CCG TGGCCTA              TCTTGCGATTCCGCT  53 23
        rpsO  417539 ..  417564 + -14.8  -3.31461   TGCGAGTTTCAAGTA         GAAAGGGGCC TATTCT GGCCCCTTTC          TTCTAAGAATCGATG 100 44
         pnp  419913 ..  419945 + -13.6  -2.68823   GTAATTAAGCATTTT      TACCACTCTTTACC AACCA GGTAGGGAGTGGTA      CTTATCTCGAGGGCA  93 37
        nlpI  420959 ..  420984 +  -2.5  -5.28166   TGGTTTTTTGCCAAT         GTTTATCACCT TAAC GGGTGATGGCC          TTTTTGTTCGTTTTA  76 71
ND012_RS01935  423104 ..  423119 + -10.4  -5.42862   GATGAGTAATAAAAA              CCAGCC TTCG GGCTGG               TTTTTTTACGCCTAT 100 58
ND012_RS01945 NONE
ND012_RS01950  427682 ..  427707 +  -9.7  -2.57018   AGTAAAATATAAAAA         AGGGAGAGGCA GCGA TGTCTCTCCCG          ATATATTCTGTTATG  71 50
ND012_RS01965  430402 ..  430412 +  -3.2  -2.93348   CACGGAAAAAGTTTC                 CCGT GTC ATGG                 TGTCGTGTTGATCCG  44 4
ND012_RS01970  430961 ..  430987 + -10.9  -4.93595   TAAATCTGCCACACT         GGAGGGCTGGT CGTGT ACCAGCCTTTC         TTTTTGCATTTTTGT 100 66
ND012_RS01995  436425 ..  436435 +  -2.4  -4.87389   GCGATCCGGCATGAG                 CGTC ACC GTCG                 TTTATTTTTAAGCTG  66 27
ND012_RS02000  437252 ..  437271 +    -7  -2.71011   ATAAGCCATTTCCAT            GCCGCCCG GCAG CGAGTGGC             TGATTAGCCAGCAAT  56 54
        rraB  449331 ..  449352 + -11.6  -5.54894   GTTTGGTCTCATAAG           CCCGCACT TTCTAC AGTGCGGG            TTTTTTTAATGGGTT 100 65
        lptF NONE
        lptG NONE
ND012_RS02100  457760 ..  457775 +    -9  -5.64274   ATTAGTATGTAAATA              GACCTC AACT GAGGTC               TTTTTTTATGCCTAA 100 40
        hsdR  463077 ..  463089 +  -9.1  -4.73388   CTGGTAAAATTCGCT                GGCGA AAC TCGCC                TTTTTAATCGCGCTT 100 43
ND012_RS02115 NONE
ND012_RS02120 NONE
ND012_RS02125 NONE
ND012_RS02130  467863 ..  467874 +    -3  -4.82901   TGTATAGGTTGACGG                CAAA TGTG TTTG                 TTTTTGTGCGGACAA  68 127
ND012_RS02145 NONE
ND012_RS02150  471634 ..  471644 +  -6.8  -3.29739   GCATTATGACGGCTA                 TGGG TAA CCCA                 TTAATATCGATTAAA  61 68
ND012_RS02155  472223 ..  472248 +  -6.1  -3.15841   AACCAAAAAAAACAA         TCAGCCATTGC CAAA GCATTGACTGA          TATTGATACCCTTAT  57 4
ND012_RS02160 NONE
ND012_RS02165 NONE
ND012_RS02170  475020 ..  475032 +  -4.8   -3.7732   TTCATGCAGGCAAGG                CGGT AAACC ACCG                TTGTTCGTATGAGGG  59 379
ND012_RS02205 NONE
ND012_RS02210  477905 ..  477920 +    -9  -5.76633   CCGGCCTTCTAAATA              GACCTC AACT GAGGTC               TTTTTTTATGTCTAA 100 202
ND012_RS02225  480163 ..  480179 +  -2.4  -4.14243   TATACGTGATGGAAA              TTTATT AATGC AATAAA              TTTTCAAATACAATA  55 10
ND012_RS02230  480937 ..  480959 +  -3.6  -3.14344   CCATGTAAATAGTTA           TTAAATATAA ACT TTATATATAA           TTAATAAAAGCAATA  48 44
ND012_RS02235  484003 ..  484025 +   -10  -4.04752   CGATGGACTCTTCCT           GAACATCAAT TCT ATTGGTGTTC           TTTATCCTCTGCTTT  86 117
ND012_RS02240  485362 ..  485377 +  -3.4  -4.81685   AGATAGGCAAGATGA              TAAAAA TATA TTTTTA               TTTTTCCTGCTTGGT  68 62
ND012_RS02245  487617 ..  487630 +  -5.3  -3.29263   GATATATTGGCCTGA               GTGTT TCCA AACAC                TTCTAACCCACGTAT  55 6
ND012_RS02250  490948 ..  490970 + -12.1  -5.10665   TTAAGTTAATAACAA           CAGGACACA ATTTA TGTGTCCTG           TTTTATTTGTTAGGT 100 103
        agaR  494273 ..  494314 +  -8.3  -3.19389   AAGAGAAATAACACC CTAACTCCATGGT-GACATT ATC AATGTTAATTGTGGAGTTAG TTAATGCATCCGTTA  67 30
        kbaZ NONE
ND012_RS02270 NONE
        agaV  497274 ..  497292 +  -8.8  -2.56914   CCCAGTGAATGTGAT             TGAGCTGG CTG CCAGCGCA             TGAATTCATGAAGTA  66 4
        agaW NONE
ND012_RS02285  499026 ..  499065 +  -9.2   -3.0263   GCGTCATTCTGCATG  CCGTATCCGTTCAGTGGT GATC ACATCAGACCGGATACGG   TGTTAGCAGAATGCT  71 58
        agaF NONE
        nagA NONE
        kduI NONE
        kduD NONE
ND012_RS02310  503825 ..  503846 + -15.9  -3.80174   TCCTTGTCGGCTCGT           TCCGCGCCA TCTC TGGCGCGGA            TTCTTCTCCCGCTAT 100 169
ND012_RS02315 NONE
ND012_RS02320  506913 ..  506940 +  -5.6  -4.57073   ATTCTGGAAGAATCT        GCGAAAAGCTGA GTCT TTAGTTATTCGC         TTTTTAAAAAAAGTC  73 14
ND012_RS02325  508676 ..  508687 +  -2.2  -3.06528   AAGGAAATGAAATCA                CTGG AGGT TCAG                 TCATGTTTTTGGTTT  42 123
ND012_RS02330 NONE
ND012_RS02335  510245 ..  510264 + -10.7  -6.14618   TGTGTCATTTATTTT            CAGCGCC TTTTTC GGCGCTG             TTTTTTTATTTTATG 100 124
        rfaQ NONE
ND012_RS02350  513714 ..  513739 +  -4.1  -4.07687   TTACTGTATGAGATG         TATTAGTCATCC CTC GGTTGAC-AATA         TTTTAGAAAAGGACT  61 231
ND012_RS02355  514081 ..  514097 +  -7.3  -3.83717   ATAGCACCGTAGCTT              TGATGGC CAT GTCATCA              TATTTTCACTTTTTA  70 164
ND012_RS02360 NONE
ND012_RS02365  518368 ..  518392 +  -8.5  -5.79526   TTTTTTACTGAAAAA          CCGCCCAGTCA CTT TAGTTGGGCGG          TTTTTTTTCGCGTAT 100 47
ND012_RS02370  519796 ..  519819 + -10.2  -3.35679   TTTTTGTGATACGAA          CCGGGTTGCC AGTC GGTCACCCGG           TTGTGGATGCCACCC  78 47
        dhaK  520911 ..  520929 + -10.2  -3.20382   ATGCACCGGTCAATA             CCCCGGCG CTG CGTTGGGG             TTGCTAAATGTCGGA  77 0
        dhaL NONE
        dhaM  523102 ..  523119 +  -8.4  -4.86001   ACGCTATCTCAATAG             GGAGCC TTATCT GGCTCC              TTTTTATCACATCCT 100 49
ND012_RS02400  527591 ..  527603 +  -2.7  -2.99704   GCATGTGCTGTGTAA                CATAA ATC TTGTG                ATTGTTTGGTGCGAA  43 377
ND012_RS02425 NONE
        rimI  530026 ..  530040 +  -4.2  -3.74158   ATGATGGCGTTACCT               TTGGCT TAA AGCCGG               TTTCGCTGTCGTTGC  57 17
        prfC  531802 ..  531822 + -11.2  -4.25231   TGTCAGCCTGACTCA            TCGGGGTA TTCAT TACCCCGA            TTATTTAATTTTATT 100 48
        osmY  532891 ..  532913 +  -5.5  -5.52384   TCAATAGGTCATCAA          CGGCCAGCAC GTTT GTGA-GGCCG           TTTTTTTAATACGAA  87 141
ND012_RS02445  533217 ..  533228 +  -2.2   -2.7035   GACTGGAGGGTTTAA                TCGC GATG GTGA                 TGGTATATGACTGAC  40 137
ND012_RS02450 NONE
ND012_RS02455 NONE
ND012_RS02460  536926 ..  536964 + -10.2  -3.15861   ACGATTTTGTCATCT   CCGAGCTGGTGGGGTG TCTCTTT CACCTCGCCAGCCCGC   TTCCTCGCCATACTG  77 46
        deoC  538207 ..  538226 + -10.6  -3.26531   ACCATTATTGACAGG            CGACGGGC AAAA GCCCGCCG             TATTGCTATTGCTGA  78 40
        deoA  539606 ..  539616 +  -2.6  -2.63784   TGGTTTATCGTCGGA                 TTAT CGA ATAA                 GCTTTATTTATTCAT  41 15
        deoB  540930 ..  540960 +  -6.7  -3.24745   CATGCTTTGATTACC       CATACCGGATCGC ATCGC GCGCTCCGGTCAG       TAATTTATTATTTTA  61 31
        deoD  541738 ..  541767 + -11.5  -3.22476   GCATAAACTATTTTG       CCAGAGTCGCA TTGTTCGC TGCGGCTCTGG        TTAATCGTGACTGAT  84 35
        serB  543974 ..  543986 +  -2.6    -3.767   CTGATGTAAGCTCAT                CGGG ATTTG CTCG                TTTGCTGCCTAGCTG  52 100
        radA  545428 ..  545455 +    -2  -3.83066   AACTGGCGGATGCGT        TGGCGGTTTTAGA CGA TCTGTAGC-GCCA        TTTAGTCGTGTCGTT  51 3
        nadR  546914 ..  546931 +  -4.1  -4.84492   ATAGTCATAACTTTA             TGGCCGA TTAC TTGGTCA              TTTTCTTATACTTGA  71 129
        sltY NONE
        trpR  555998 ..  556013 +  -6.8  -3.70902   GTGGTCACTCGCTGA              CGCGCA CCGG TGCGTG               TTTCGGTATCGCCGA  63 437
        gpmB  556945 ..  556955 +    -4  -2.72144   CGGGAAGAAACGTTC                 GATA TCG TATC                 CTTTCCGGCGAGTCA  44 106
        creA  558458 ..  558475 +  -6.9  -5.50499   ATGGATAAAAAAAAA             CCAGCAC TTCC GCGCTGG              TTTTTTTGCCTATCA  91 50
ND012_RS02560  559803 ..  559813 +  -5.4  -3.65529   AATGATCTTATAATT                 CACA TTA TGTG                 TTTGCCTAAAAATCT  59 373
        thrL  560242 ..  560264 +   -12  -5.76949   GAAACACAGAAAAAA           GCCCGCAC CTAAACA GTGCGGGC           TTTTTTTTCGGCATA 100 44
        thrA  562739 ..  562753 +  -4.2  -2.84013   TTATTACGCACATTA               TCCTGG AAG CTGGGA               GTTTAAATATGGTTA  46 5
        thrB NONE
        thrC  565024 ..  565047 + -15.4  -3.17229   GACATCGCAAAAGCA          GAAAAGGGCC GGTT GGCCCTTTTC           TATTAATGATGACGT 100 65
         tal  567167 ..  567182 +  -4.6  -5.60993   CGATTGAAAGAAAAA              GGTGGC GTAA GCTGCC               TTTTTTTATGGAAAA  91 58
         mog  567974 ..  567984 +    -4  -3.59583   AATTTGTACGGTATA                 GTAA CTT TTAC                 TTTACAAATGGTTGT  54 87
ND012_RS02600  569387 ..  569407 + -14.1  -3.76837   TCTTTTCTCAATAAA            TAGCCCATG CAT CATGGGCTA            TTCTTAACTTATCTA 100 59
        dnaK  575049 ..  575090 +  -8.5  -3.04144   CATACTGTTGCTGGA AACCAGCACGGGCGTCGAG GCAA CTCTACGCCCGTGCACGCA  TGTTAAGGGTAGGAA  65 72
        dnaJ  576283 ..  576302 +   -10  -5.52384   TTATTGAAAATAAAA            TCCTCGGT TGAT ACCGGGGA             TTTTTTTCGTCAGGA 100 61
        nhaA  577713 ..  577728 +  -2.5  -3.26844   GTCGATGCGGTGTAA              TGCTG TGATAT CGGCA               GTTTTGCTTGATGGG  46 75
        nhaR  578838 ..  578851 +  -9.5  -3.98256   GTGAATATAAAAAAA               CCGGC CTAA GCCGG                TCTTTTTACTAAGCA  83 125
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH  585281 ..  585297 +  -9.4  -5.60993   CGGAATAGAGTAAAA              GCAGCC CAAAA GGCTGC              TTTTTTTATGCCGAA 100 46
        dapB  586495 ..  586528 +  -4.7  -6.34616   ATATTTATAAGTCAC     TGATAGCACGGTGATA TTT TATCGCCTTGCT-TTA     TTTTTTTTATTTTAA 100 71
        carA NONE
        carB  591836 ..  591847 +  -4.4   -3.9901   TTGCAAAGGTAGCCT                TGCA AGAA TGCA                 TTCTTCATTTTGATT  60 521
ND012_RS02685 NONE
ND012_RS02690  593605 ..  593618 +  -3.9  -2.91681   TCTCTATCCTGGTAT               TAAGA GCTA TCTTA                TATGTGCGATTAGCA  46 58
        folA  594393 ..  594413 + -11.2  -5.61881   TATCATTAACCTCAA            TGGAGGCA TCAAC TGCCTCCA            TTTTTATTTTTACAA 100 213
ND012_RS02700  595455 ..  595495 +    -2  -5.43866   TGGCACAAATTGATT CCGTGCCATTTA-ATCTCGT TAG AC-AGATTTAGACTGCACGG TTTTTTTGAGCGTTG  78 452
        djlA  603405 ..  603416 +  -5.8  -4.05678   TCTTTTTGACCGCGT                TCCC GTTC GGGA                 TATTTTGTTTGAAAA  66 154
ND012_RS02755  611048 ..  611066 +    -6   -3.6682   CGACGTTGGCAGACT             TGATTCAG CAA CTGAAGCA             TTTCGGTGCGTAAGG  61 203
        sgrT  616350 ..  616371 + -10.1  -5.55769   TGGTGTTTTTCACCA           GCCAGTGGG GCGA CCTGCTGGC            TTTTTTATTCTCCGA 100 108
ND012_RS02785  618060 ..  618072 +  -9.1  -3.01712   TCCGTAATCCGTCAG                TGCCC AAG GGGCA                TGTTCACGGGAGGAG  66 419
ND012_RS02815  626731 ..  626741 +  -2.4  -4.44608   TATCATCCTCTCCAG                 CCTC ATC GCGG                 TTCTTTTTGCATAAA  60 127
        ilvI NONE
        ilvN  629316 ..  629335 + -11.4  -6.17292   GCTGCATAATTTAAG            GCTCTGCG TTGA CGCAGGGC             TTTTTTTTTACATTT 100 60
         cra  630536 ..  630561 + -13.3  -3.58726   TGAATCATGAATGCA         ATCGGGCACCT AAAT AGGTGCCCGAA          TTCTATCTAAAACGC 100 46
ND012_RS02840  632327 ..  632338 +    -3  -4.30987   GGGCGGGGAGGATGT                CAAA TCGG TTTG                 TTTCTTCTCAAACAT  61 66
        mraZ NONE
        rsmH NONE
        ftsL NONE
ND012_RS02865 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
ND012_RS02905 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ  650554 ..  650564 +  -3.2  -2.74122   TAATTTCCGAAAATT                 TGGA ATC TCCG                 CTCTTTGTGCTAAAC  43 38
        lpxC  651991 ..  652008 +  -5.5  -3.45054   ACGATTGAGTTTTAA             CAGTGCG ACAG CGCGTTG              TTGTACGTTGTGCAG  56 455
        secM  652696 ..  652714 +  -8.8  -3.30771   TTTAACGAAACCTTT             GACCGCCG GTT TGGTGGTC             TTGTAAGAGATATAA  71 61
        secA  655490 ..  655516 +  -9.3  -4.90013   TTTAAACAGTAAATT         GCAGGGCGGCC GAATA GACCGCCCTTC         TTTTTGCTTAAATTC 100 62
        mutT  655980 ..  656004 +  -7.2  -3.31144   GTAAAGCCTCTTGGA          TAGGAGCAGT CTCTC GTTGCTCCTA          TTATCACAATGGGAG  64 37
ND012_RS02965  659169 ..  659188 +  -5.7   -4.8622   CTGAATATTATGAAA            GGACACT GATTGA GGTGTCC             TTTTTCGTTGCCCGC  78 88
        ampD NONE
        ampE  665279 ..  665306 +  -8.5  -3.54771   CAGCGGTTTGGCTCG        CGCATCAGC TTATTCCGCT GCTGATGCG         TTGTGGTGTTATCAG  71 132
        pdhR  668137 ..  668149 +  -7.7  -2.65145   AGGATTAAGGGCTTG                TCCTC ATA GAGGA                TCGGTTCTATGTGCT  60 33
        aceE NONE
        aceF  672866 ..  672891 +  -9.7  -3.83675   TGGTTATGTAATCCA         TGAGGCCGGCG TTTG TGTCGGCCTTA          TTATTACTTGGCTTA  84 30
        lpdA  674579 ..  674599 + -12.6   -4.7373   AGAAAGAACATCAAA            CGGCTCCT TATTC AGGAGCCG            TTTTTACTGAAATAA 100 55
        acnB  679499 ..  679515 + -11.5  -5.87996   GAGTTAATAATTGAA              GGGGGCC AAT GGCCTCC              TTTTTTTATTGGTTA 100 65
        yacL  680330 ..  680355 +  -6.1  -4.72986   GTGTGAAATAAGACA         GGGCAGCAACCA AGG TGGC-GTTGCCC         TTTTTCATGGCGCTG  78 189
        cueO  685282 ..  685306 + -11.4   -3.3217   GAGTGCCTAACCGAC          TCCCCGAGCC TAACT GGCTCGGGAA          ATTTTATCGTTCCAG  86 31
         hpt  686250 ..  686261 +  -2.2   -3.8709   GCCATAAACCCAACC                GTGA ATCA TCGC                 TTTCTGCCCACGTTT  52 305
ND012_RS03075 NONE
ND012_RS03080  688848 ..  688863 +  -3.2  -3.76815   TAGCATCTTATGCTA              TGCTGG CGCA CCAGAA               TTTCCCCTTTTCACT  53 164
ND012_RS03085  690247 ..  690264 + -11.3  -5.29782   GTCAAAAAATAAAAA             GGAGCCA AAAA TGGCTCC              TTTTTTATGAATATC 100 54
        hrpB  700579 ..  700591 +  -3.4  -2.72568   CAAGAAGTATCAAAG                CTGA TGAAT TCAG                ATGTTTCCTCTTCCC  42 22
        mrcB  703373 ..  703391 +  -8.1  -5.24129   GTTCGATAATAAAAA             CCCGCAG CGTCA TTGCGGG             TTTTTTATACGAAAA  95 245
        clcA  706410 ..  706442 +  -2.8  -2.76263   AATATAACATTGAAT      GCCAATACTTGA ACCAATTAC TCAGGTATTGGA      TAATTGGCTCATAGA  42 41
        erpA  706886 ..  706906 +    -9  -5.90981   TTGAGGCATAAAAAA           CCGCG-ACC TACA GGTTCGCGG            TTTTTTTTAATCTGG 100 55
         dgt  710850 ..  710867 +  -2.7  -3.55946   TAAGCATTAATGAAC             TTAACGG AATG CAGTTAA              TCTTATTTCACATGG  48 119
        degP  712406 ..  712428 + -11.3  -4.61747   GTCTGTTTGCGAGGA           GGGCAGGGT GATGA ATCCTGCCC           TTTTGTGATTGTTCA 100 47
        rlmD NONE
        relA  718896 ..  718908 +  -4.8  -4.32034   TCACTTTAATGATAA                TGGC TTCTT GCCA                TTTTAATCGTGGTCA  66 45
        mazG NONE
        pyrG  721719 ..  721742 + -13.1  -3.02109   TAAAATATTTGATAG          GGGGGCGGC TGAGAT GTCGCCCCC           TCTGTCTGGAGTTTT  95 38
         eno  723108 ..  723121 +  -9.5  -6.44931   ATATTTATTAAAGAA               CCCGC TTCG GCGGG                TTTTTTTTTGTTCTT 100 53
        queE  723981 ..  723993 +  -9.1  -4.68655   CCGCGATAAATGCAG                CCTGC CGA GCAGG                TTTCTTTTACCATTA 100 101
        cysJ NONE
        cysI NONE
ND012_RS03235  729003 ..  729030 +  -6.2  -2.65354   ATCGGGAATCGGGTT        ACACGAGGG-CAG CTG CCGTCCCTCGTGG        TGAGTTTACAATAAC  54 85
        cysG NONE
        cysD NONE
        cysN NONE
        cysC NONE
ND012_RS03275  736310 ..  736324 +  -6.4  -3.65603   ATAGTGATGGAAATT               GCGTAA TGA TTGCGC               TTATTGCCACTGTTT  63 278
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
ND012_RS03305  740535 ..  740551 +  -7.3  -4.43624   GGTGCTAACAACACC              CAAGGTG CTG CATCTTG              TTTCTTCTGTGCTTT  76 147
        nlpD NONE
        rpoS  742860 ..  742880 +  -9.7   -5.3671   GAAATTAAATAAAAA            CGGTGAGCA TTT TGCTCACCA            TTTTTTGCTTATATT 100 160
ND012_RS03335  746651 ..  746670 +    -5  -3.74693   TTCCTAGACGGTTGC            GTGCCT CATGAACC AGGCAC             TTTCATAAACTGCAG  59 49
ND012_RS03355 NONE
ND012_RS03360 NONE
ND012_RS03365 NONE
ND012_RS03370 NONE
ND012_RS03375  752923 ..  752939 +  -5.9   -4.1721   AAAATCATAAATACC              TAGTGAG TAG CTCATTA              TTTTAGACTGTAAAT  68 61
ND012_RS03385  755235 ..  755246 +    -3  -3.86015   CGCGCCATAAAAATG                GATA TAGA TATC                 TTTATAGGGAAGATC  54 263
        pncC  760734 ..  760753 +  -5.8  -2.71263   AAAAAATAGGCTTGA            TACTGTAT GATT GTACAGTA             TAATTGAGCGCAATT  52 32
        recA  761924 ..  761954 +  -2.7  -2.66326   TATTGAACCTGAAGC      TCGGG-CTATATTA GGAA TAATATGTCCCCGA       TAGATTTCGAGTTGC  41 43
        recX  762679 ..  762699 +  -2.6  -4.34263   GAATGCACGCGGTAT            TTTACTTC CCTCC GAAGAAAA            TTTATCTTATTCCCA  59 39
        alaS  765458 ..  765485 +  -6.2   -4.7339   CGTGTAAAATAAATA        CGCCATACCCCA AAAA TAGAGTGTGGCG         TTTTTCAAGTTTCTT  77 53
        csrA  765876 ..  765910 + -12.8   -3.9373   CGACTTACTGATATT     GAAGCAGCGTCTCGCG ATA TGCGAGGCGCTACTGC     TTTACCTTTTCCCTC 100 30
ND012_RS03430 NONE
ND012_RS03435  766397 ..  766424 +    -2  -2.75183   TTCGAATCTTCCTGG        GTGCACCATATT TTGC AGTATGGTGAAA         TAGTTAAATGAACGT  41 18
ND012_RS03440  766531 ..  766541 +  -3.2  -4.54323   GTTCGAATCTTCCTG                 GGTG CAC CATC                 TTTGTTGTTATAGTT  63 17
ND012_RS03445  766680 ..  766695 +  -8.2  -4.67635   CACCATATTAAGAAA              CCTCGC TTCT GCGGGG               TTTTCTGCTTTTAGC  91 36
ND012_RS03450  766848 ..  766863 +  -8.2  -4.64846   CACCATATTAAGAAA              CCTCGC TTCT GCGGGG               TTTTCTGCTTTATGA  91 36
        yqaB  768015 ..  768026 +  -3.6   -3.2794   GCGAATATGGACGTG                GTGG ATGT CCGC                 TTGCTGTGAGTAGCA  49 5
ND012_RS03460 NONE
        gshA  770233 ..  770243 +    -4  -2.69257   TTCGAAAAAAAATTC                 TTCT ATA AGAA                 ATAATTTTTTTGAGG  45 158
        luxS  770971 ..  770984 +  -8.1   -5.4833   TCGTCATTAACCTCA               GACGC GAGA GCGTC                TTTTTTATTGGCTGA 100 212
         ffh  774866 ..  774899 + -18.3  -4.67982   GGGCTTTTTATATTG     CAACGGAACCCCGTT CCCC GATGGGGTTCCGTTG      TTTTATTAACTAAAG 100 196
        rpsP NONE
        rimM  775778 ..  775789 +    -3  -2.64313   GCGAGTGGAACAAAA                CAAT GTGG ATTG                 GTGTTATTAGCCTGT  42 62
        trmD  776565 ..  776576 +  -4.4  -3.65902   CTTGTGCTAACGATC                CTGA TATA TCAG                 TTTACCTAGGGTAAG  54 55
        rplS  776998 ..  777020 + -15.6  -5.96894   GTTAATAGTTATGAA           GGGGTTAGCC ATT GGCTGACCCC           TTTTTTTATTTGAGT 100 66
ND012_RS03525 NONE
        tyrA  783389 ..  783410 +  -7.3    -5.252   GAGGCTGGTGATAAA           GTCATCCTG TTGC TGGGATGAC            TTTTTTATGGGGGTA  91 56
        rluD NONE
        yfiH  788298 ..  788312 +  -5.7  -3.83998   ACAACCTTGAAAACT               TGAGG GGTGA CCTCA               TTTAATCTCCAGTAG  63 100
        clpB  790937 ..  790966 + -10.7  -4.38748   CAGTAAATCGTGGAA       TGGAACGGGGCAA TATT TCGCCCCGTTCTG        TTGTTTATTTATCCA 100 35
ND012_RS03570  793038 ..  793061 +  -5.2  -3.81929   TAACGAGCAAATAAG          GCCGGACTGA GAAA TTGGTCGGGC           TTTAGTACCTTGTTG  61 90
ND012_RS03575  793184 ..  793201 +  -2.7  -2.66291   CGTTGCAGCGGCATT             CGTTTAT CACC ATCAACG              TCATGTCACTGTGTG  41 57
ND012_RS03580  793350 ..  793398 +  -5.6  -3.45839   ACCATATAAAAAAAC TATTTCAAAACGTATTGCT-ACC GCAA GGTGAGTAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  59 37
ND012_RS03585  796598 ..  796608 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGTGTTTGAGAG  82 30
         rrf NONE
ND012_RS03595  797007 ..  797027 + -14.1  -5.20154   CCACTTATTGCATAA            CCCTGAATC CTA GATTCAGGG            TTTTTTGCATTCTAT 100 38
ND012_RS03600  798598 ..  798613 + -10.4  -4.63542   TAAGCATAATAAAAA              GCACCC CGTA GGGTGC               TTTTTAGCAGTTATC 100 60
ND012_RS03615  801651 ..  801700 +  -4.4  -4.42386   TGTAGCCAGTATCCT CTAGCGTTG-G-CGCGTTAGC-CGC ATC GCGGGCTAATACGTCGCAACGTTCG TTTTCTGGATGCCCG  65 61
        dnaQ  803022 ..  803042 +  -5.3  -2.76189   TTACCTCGTTCTTAA            CCGGAACAC AGC GTGGTGCGG            TAGTTCAGTCGGTTA  50 123
ND012_RS03630  803118 ..  803155 + -11.6  -3.95219   CGCACCGCCAATATT  C-A-GAAGCCCTGAGTTA GCAA TAACTCAGGGCTTCGTCG   TTTCTGCGCTTTACC 100 31
        lpcA  806681 ..  806699 + -10.2  -3.37142   GATATAGCCCGATCA             CGCCGTGA CTT TCCCGGCG             TATTATGCTGTTTTC  78 55
ND012_RS03645  807731 ..  807745 +  -4.2    -3.745   TAATATATGTCGAAT               TGCGGT GAC GCTGCA               TGTTTTGCTCGGTCA  55 163
ND012_RS03655 NONE
ND012_RS03660 NONE
ND012_RS03665 NONE
ND012_RS03670 NONE
        nqrE NONE
        nqrF  814691 ..  814707 +  -6.7  -2.87564   TCTGACAGCGTTCAA              CAATAAT AGG ATTATTG              TGTATAAAAAGATAA  57 48
ND012_RS03685  815724 ..  815734 +  -3.2  -3.11292   TTCCTGAGAAATCGA                 TCCT AGG GGGA                 GTTTATGTTGACGGT  46 20
        nqrM  815972 ..  815995 + -15.3   -2.7556   TATTCTTTGACATGA          CAGCCCGGC GCTATG GCCGGGCTG           TACTTACCTAGACTT 100 31
        dinB  818272 ..  818294 + -11.3  -3.01119   ATCACCATAAAAAAA          CGGCG-TGCC CACA GGCAACGCCG           TCTATATCACTCAAT  83 48
         gpt  820547 ..  820575 + -12.5  -3.97388   ATAATTTACATAGCT        TTAAACGTCCGAC GTC GTCGGGCGTTTCA        TTTCTCCTACGGTAT 100 37
        frsA NONE
         crl  822401 ..  822426 + -11.9  -2.96216   ATAAACCTGTGATTT         CGCGTTATGCC TGTT GGCATAACGCC          TCTCTCCTGCTACAA  86 56
        proB NONE
        proA  824971 ..  824992 + -10.1  -2.60776   ATTTAAGCTGTCTAA           CGGGCATCT ATTC AGTTGCCCG            CGTTTTTAGCCAGTT  71 140
ND012_RS03735  825869 ..  825904 +  -4.1   -3.4252   GAAGAAATATAGTGA    TCGAGGTTGGCA-CTT AGGAC GAGATGCTAGCTTCGA    TTCTGCTGAATGAGA  52 29
ND012_RS03740  826522 ..  826532 +  -3.2  -4.65895   TGACGAACGCCAATT                 GTTC ATA GAGC                 TTTTTGGCTCGAGGG  66 266
ND012_RS03750  827512 ..  827564 +  -7.2  -4.77567   TAGATGCAGTACATT GGGTTTCGATTGGAGTCA-TCAG ATTAATCA CTGACTGATTTCGTTCGGAACCC TTTTGTTATCCAGAT  85 67
ND012_RS03755 NONE
ND012_RS03760  831210 ..  831232 +  -2.7  -5.14563   ATGACTTTTACAGGA           CCGGTCA ACGCAATAA TGATCGG           TTTTTTAATGCAAGA  73 171
        aroL  832155 ..  832177 +  -8.5  -3.76884   CTAAACCTGAGTTTA           TGCCTTCAG CTTAT CTGAAGGTA           TTATTGATGGTCTCT  75 368
ND012_RS03770 NONE
ND012_RS03775 NONE
ND012_RS03780 NONE
ND012_RS03785  836721 ..  836739 +  -9.5  -5.57054   CTGTTGTTATCGTCA             CCGGGGC ATTTG GCTCCGG             TTTTTTTGCATTATT 100 62
        ppnP  837180 ..  837210 +  -7.6  -3.35679   CTCAGCTAATCAAGA       TATTGCCCTCTC CATGCCA GAGGGGGCAACA       TTATCCATGAGCCAA  66 32
         mak  839557 ..  839567 +  -2.4   -3.5518   ATAGCTAAGTCTATA                 CCGG TTT CCCG                 TTATGTCACTATTGC  47 185
        phoB  845591 ..  845602 +  -2.2  -2.52516   TACCGTTTCTCAACG                CGCT ATTA AGTG                 GTTAGTGCTGGAGAA  39 17
        phoR NONE
ND012_RS03825  848046 ..  848057 +  -2.2   -3.7511   AAAGAAACTCTCCCC                GTGG TAAA TCAC                 TTATGTTGTAACGGC  51 165
        brnQ  849756 ..  849777 + -15.9  -4.72272   AAATAAGTATGTTGA           GCCACGAGC TTTT GCTCGTGGC            TTTTTGCTGAAAGAA 100 49
        proY  851233 ..  851249 + -10.8  -5.60993   AATAGACAAGAAGAA              CCGGGC TAAGC GCCCGG              TTTTTTTATCCAGCA 100 60
        malZ  853319 ..  853334 +  -6.2  -4.64861   ACTGTTTGGAAGGGC              GTTAGT AAGT ACTAAC               TTTCTTTTGGGCGCG  77 11
ND012_RS03845  854325 ..  854350 + -13.4  -3.84992   AGACGAAGCAAAAAA         GACCAGTCAG CATGAA CTGACTGGTC          TTGTCTTATTCGGTT 100 124
        queA NONE
         tgt NONE
        yajC NONE
        secD NONE
        secF  861532 ..  861547 +    -9  -4.93316   GTAACTTAATAAAAA              GCCTCA TTTT TGAGGC               TTTTTGCTATTATTA 100 83
        nrdR  862251 ..  862262 +  -4.4  -2.73124   GATTGCAGGACTAGC                TCTG CCCA CAGA                 ATTTAAGGAATAGCA  45 27
        ribD  863393 ..  863411 +  -3.8  -4.44461   ACCAAAGTATTAATT             TTTTGGCT TCA GGCCAATA             TTTTCTCCGCTTATT  65 28
        ribE NONE
        nusB NONE
        thiL NONE
        pgpA  866214 ..  866233 +  -4.2   -4.0616   CTTGACGATCTGCCT            GTTTTCGC CGCT GCGAGCAC             TTTGTCATTAACCTC  59 238
        thiI  871268 ..  871294 + -10.9  -3.14564   GGCGGTATTCAGAGG        CC-CAAGGGCGC TTAT GCGCTCTTGAGG         TTAATGACAAAGTGC  79 45
        pgtP  877788 ..  877818 +  -4.7  -4.22927   TAAATATGCCCGGCG       GCAGAATGAGTTG GCGGG CAACTTCTTCAGC       TTTCTCTCTTCCTAG  64 99
ND012_RS03965  879925 ..  879956 +  -4.6   -5.4505   AAGTCAACCAGCAAA     GAGGAACAGCAACC CATACC GGT-G-TGTTCCTC      TTTTTTATTCGCCAA  87 39
        bolA  890613 ..  890635 +   -12  -5.08824   TAGTAGCGAAATAGA           CGAACGGCCT CTG GGGCCGTTTG           TTTTTTAACTAGCGA 100 95
         tig  892312 ..  892334 + -14.8  -5.64873   CGTTTTGACTTTTAA           GCCCGTCGCC TTT GGCAACGGGC           TTTTTTCTTATTGGA 100 79
        clpP  893333 ..  893345 +  -4.9  -3.57615   CGTATTTCTGTGTGC                CTATA GGC TATAG                TTTAAGCAGTATTGC  57 44
        clpX  894777 ..  894795 + -13.2  -4.91852   CAGTTAGTAAGATAA             TGGGGGAT TTT ATCCCCCA             TTTCTTTTTCCTCGC 100 59
         lon  897324 ..  897354 +  -4.8    -5.252   TATTGATAAAACTGA      T-GCTGGTAAGCG AAATCC TGCTTGCCAGCCA       TTTTTTGTGCCGCTA  82 58
        hupB  897868 ..  897887 +   -10  -5.86332   AAGGTAAGATATAAG            GCGCATCG CTAT TGATGCGC             TTTTTTTTCGCTTGG 100 112
        ppiD  899990 ..  900005 + -11.8  -3.65425   GATGTAACAACGAAA              GGCCGC TTTA GCGGCC               TTTCGCATATCTAGA  93 63
ND012_RS04050  900505 ..  900525 +  -8.3  -3.15758   ACTCAGAGATATCGG            CTCATGTAG TAA CAACATGAG            TTCATCGACAGTTAT  67 41
ND012_RS04055  901436 ..  901454 +  -3.1  -5.26119   CCTGATCATTAACTT             CTGGTTT AGCGC AAACCCG             TTTTATTTTTGAGGC  79 247
         cof  904926 ..  904943 + -11.3  -6.06529   TAGCTATTAGCCAGA             GCCGGAT AATT ATCCGGC              TTTTTTTTGTCTATG 100 46
ND012_RS04080  906735 ..  906747 +  -6.3  -3.15544   GATAGCTTATTTCAG                TATCC ATA GGATA                TTGATGGGCGTCGCC  57 133
ND012_RS04085 NONE
ND012_RS04090  910330 ..  910341 +  -5.8  -2.63079   GATCAGGAGGAAGTT                TCCG TTAG CGGA                 TAAATTGTGTCAGGG  52 11
        glnK NONE
        amtB  912356 ..  912385 + -10.7  -2.94411   AAATAAAGATGATAG       CGAAGGGGCGATA ACAA TATCGCCCCTGCA        ATTATTTCAACACAT  79 58
         ffs  914743 ..  914773 +  -3.3  -3.82084   GTAAACCATTACCAC      CATTGAGGCCGATA TGTT TACCGGC-TCAACG       TTGTTCGTCTTAACC  53 471
ND012_RS04130  916651 ..  916679 +  -8.9  -4.21936   CTGTATGAAATAGCG        TTTCCCCCTGT CAATGCT ACAGGGGGAGG        TTTTACACTTGTGGG  83 41
        acrR NONE
ND012_RS04160  922888 ..  922904 +  -6.7  -2.68079   TAGAATTGCCCAATA              TTTTCAT GGA ATGAAAA              ACTTTTCTTATCATC  56 42
        mscK  926439 ..  926461 +  -9.9  -5.40072   AGATAAACGAATGAG           GGCGAAACC AATGC GGTTTCGTC           TTTTTTTGGGCGCGA 100 90
ND012_RS04180  928101 ..  928114 +  -3.7  -3.28785   TTGAGCGTTTTCGTA               CGCGG ATTG CCTCG                TTGGCTCTTTTCAGA  49 83
         apt  928810 ..  928836 +    -8  -5.56673   CCATTCGAAAAAGTG        CGGCCTC-GCC GATATA GGTAGAGGCCG         TTTTTTGTTATCAAT 100 44
        tctD NONE
ND012_RS04210  934190 ..  934201 +  -4.4  -3.83026   ATTATGCCGGTATAA                GCAT TCCC ATGC                 TTTGGTATAGAACGC  57 193
        dnaX NONE
ND012_RS04220  936622 ..  936635 +  -2.3  -2.64099   ATGCAATTGCCACCG               GGCTT CAAG ATGCC                ATTCTGATGCAAACC  40 5
        recR NONE
        htpG  939308 ..  939337 + -12.9  -3.53224   AATTTGTAATGCTAT       CGCCCCTGACCAA AGGC TTGGTTAGGGGCA        TTTAGCCACGCAATC 100 39
         adk  940192 ..  940208 + -11.5  -4.67968   GGGTATACCAGAGAG              GGCGGCC ATG GGTCGCC              TTTCTTATTTGTTAA 100 47
        hemH  941248 ..  941260 +  -3.5  -4.45723   GAGTTGATTGTTGGA                TATAT ATA ATATA                TTTTAATATATTCTT  65 17
   wzz(fepE)  942544 ..  942571 +  -7.6  -5.64274   CACTGATTGATTTAA        CGGCCAGGCAGG TTTT TCTTCCTGGCCA         TTTTTTTATAAATCA 100 55
ND012_RS04250  944064 ..  944096 + -11.4   -4.1673   AGTGAAAACCATATC     GACAAAAGGCCTGCA ATTT TGCTGGCC-TTTGTC      TTTGTTAGCACGTTA 100 54
        ushA  948166 ..  948196 + -14.9  -4.64144   GTTTTCTTTCGTTTA       TAGGCATGACGAT TCTTT ATCGTCGTGCCTA       TTTTTACCCGTTATT 100 51
        cueR  953298 ..  953331 +  -6.7   -3.3482   ATCATAAGAGGATAA     CTGCCCATCAACAGCA AAG TGCCAT-GATGGGCGG     TTAATTAACGAGTTA  61 34
ND012_RS04310 NONE
ND012_RS04315  960446 ..  960468 +  -7.7   -4.8667   GCATCAACAATAAAA           CAGCGGC ATTCAGGTG GCCGCTG           TTTTTATCCGATGTA  91 66
        cysS  965264 ..  965294 +  -6.9  -5.50499   CGTTAATTTAATTCA      TTGCGGT-TCTGGT TTTG GCCAGTCACCGCAA       TTTTTTTGCCTGTAG  91 70
ND012_RS04345 NONE
ND012_RS04350  968300 ..  968313 +  -3.9  -3.78329   TCGAGATGTGTCGGG               TTGAA TAAT TTCAA                TTTCGATTGATGACG  56 473
ND012_RS04355  969013 ..  969035 + -10.6  -4.68103   TGTCGTGAATATAAA           GCATGCGG AATATAC CCGCATGC           TTTTATTAAACTTCA 100 52
ND012_RS04360 NONE
ND012_RS04365 NONE
ND012_RS04370 NONE
ND012_RS04375  973489 ..  973499 +  -2.6  -3.54146   ATAAAATGAGATAAA                 TAAT GAA ATTA                 TTAATTTCAACTATT  48 37
ND012_RS04380  974019 ..  974031 +  -4.9  -4.70511   AGCATCTCTTATAAC                TGAAT GAC ATTCA                TTATTTTATTTTTGC  71 23
ND012_RS04385  974934 ..  974957 +  -2.4  -3.31537   AAACAGCTCCTTATA          TAAGTAAGGG GTTA CCCTTAAATA           TTGATATGATATGCT  45 64
ND012_RS04390  976825 ..  976855 +  -9.1  -5.00884   CATTAAAACTAAAAA      ATGCGGTT-CTGAC GTAG GTCAGTAACCGCAA       TTTTTTAGCCAGAAT 100 168
ND012_RS04405  978598 ..  978626 +  -6.1  -3.34192   GAGTGAAATAGTAAA        TTGAGAGCC ACTTTCATTAC GGCTCTCAA        TTAATTAAAAACATT  59 333
ND012_RS04410 NONE
ND012_RS04415 NONE
        arsC  981391 ..  981419 +  -6.7  -5.10656   TGGGAAGTCAGGAAT        TGCCTAATCCATC TTG GATGGCTTAGTCG        TTTTGTTATTTTAAT  88 171
ND012_RS04425 NONE
ND012_RS04430 NONE
ND012_RS04435 NONE
ND012_RS04440 NONE
ND012_RS04445 NONE
ND012_RS04450 NONE
ND012_RS04455  987439 ..  987455 +  -8.7  -2.92777   GTGATTGTTGTGGGG              GCGTGGA TGA TTCACGC              ATTTGCTGTATCGGA  68 436
        opgC NONE
ND012_RS04465  991268 ..  991297 +  -8.6  -4.07885   TTTACCAGCCCTTGG       TCTCGCCTTTTC TCTGGT GATGAGGCGAGA        TTTTCAACGGCACTC  79 136
ND012_RS04470  992124 ..  992136 +  -4.1  -4.25104   TATAAAAAGGTCAGG                GATGT TGG GCATC                TTTTACTGGGAACGA  63 114
ND012_RS04475 NONE
ND012_RS04480 NONE
ND012_RS04485 NONE
ND012_RS04490  995483 ..  995497 +  -7.2  -3.89524   ATAGAAGATAAAACG               TGAATG TTA CATTCA               TTTATAAAGTAACAT  70 23
ND012_RS04495 NONE
ND012_RS04500  998809 ..  998839 +  -4.1  -4.98436   TCAGTTTTGATAAGA       TCAAGCACC ATGATGAAGGTGG GGTGCTTGA       TTTTTATGCTCTTGG  74 65
ND012_RS04505 NONE
ND012_RS04510 NONE
ND012_RS04515 NONE
ND012_RS04520 NONE
ND012_RS04525 1009613 .. 1009629 +  -5.1  -3.08471   TAAGGGGAATTTCCC              CGTTTTC AAC GGGAACG              TTAAGTAGAATTATG  53 1
ND012_RS04535 NONE
ND012_RS04540 1011448 .. 1011464 +  -7.3    -5.252   TTTTACAATAAAAAA              GGATCTT CTT GAGATCC              TTTTTTCTGCACGTA  91 65
ND012_RS04545 1012801 .. 1012817 + -12.3  -3.76393   TGCTTGATAATCATG              GCACGGT AAG ACCGTGC              TTTAAATTAACATCT 100 34
ND012_RS04555 1015358 .. 1015374 +  -2.9  -4.56597   AGTTACATTTTGGTG              TGTCGTC ACT GACAGCA              TTTTTAACGGAACGG  65 262
        cspE 1016276 .. 1016295 +  -7.8   -5.4505   CAATATTCTTAAAAA            CCCGCC TCAACACT GGCGGG             TTTTTTATTGCCCGA 100 46
ND012_RS04575 1017891 .. 1017911 +  -5.3  -3.27298   TAAACTCTATTTCAG            CCAGTTTCC CCT GGATTCTGG            TTAATACTTCACGCG  54 217
        tatA 1019238 .. 1019260 +  -5.5  -4.77036   CGGTTGAATAAGAAA           CGGATATCC CAAAA GGAGGTCCG           TTTTTGCTGGTCAGC  75 76
ND012_RS04655 1034215 .. 1034245 +  -7.6  -3.72051   TCGATTAGTGCAGAA       TCTTGGCGAGAAAA TCT TTTGCTCGCTCAGA       TTTAGGATTATTGAA  70 133
        ubiF 1045601 .. 1045639 + -11.7  -2.53911   TGTATGGCTGGGATA   CCAGGATTCGAACCTGG GAATG CCAGGATCAAAACCTGG   TGCCTTACCGCTTGG  79 370
        nagE 1054907 .. 1054932 + -17.7  -4.91109   ATTACAAACAAATCA         GCGGGAAGAGA GTGA TCTCTTCCCGC          TTTTTATCGTGAAAC 100 70
        glnS 1056785 .. 1056813 + -10.2  -5.03715   GTTAAGTCTTTGAAG        GTGGCTGCAGCG GATAA CGTTGCGGCCTC        TTTTTTGCCCATAAT 100 93
ND012_RS04775 NONE
        chiQ NONE
ND012_RS04785 1062170 .. 1062186 + -10.8  -5.77853   AGTAGAGAGTCATTT              CCCCGG TGCTC CCGGGG              TTTTTTTTGCCGGTT 100 131
ND012_RS04800 1066371 .. 1066395 +  -7.3  -3.90286   ATTCGGTTAACACGT          TTCAGGTTA CAACCGC TAACCTGAA          TTTGCATTTGTCCTC  70 458
        seqA 1068193 .. 1068227 +  -2.1  -4.78149   TCTGGCGGGTAATAG    GCCTCCTTCATTGGGC TGGA GCCTGTTGAA-GATGC     TTTTTAGCTTATAGG  66 97
         pgm 1069932 .. 1069954 +  -9.1  -5.46657   AAGGTGTGAATAACA           GGCAGTCCT ATGGC GGGGCTGCC           TTTTTTATTCGGCTA 100 61
ND012_RS04860 1079216 .. 1079241 + -11.1  -4.56978   CCGTTATGAAATCAA         TGCCGGTCAGC GTTC GCTGGGCGGCA          TTTGTTATTTCAACG 100 61
ND012_RS04865 1080563 .. 1080589 +    -5  -3.08133   TATGTGTACGCTCCG         GTTCTTGTGCGC TGG GCGCACCCGAAG         TTGGCTAGCTCGCTA  51 101
        phrB NONE
ND012_RS04875 NONE
ND012_RS04880 1083998 .. 1084026 +  -8.9  -2.79273   TGAGCATTGAATATT        TCACGCCATCC TATCAGC GGATGGCATGA        CTTATCTTGGCGAAA  67 38
        pxpB NONE
ND012_RS04890 NONE
        pxpA 1086692 .. 1086707 +  -7.6  -3.14132   TCATCCAGCACAATA              TCAGCA TCAG TGCTGA               TTAATAGGGCACCAA  63 6
ND012_RS04900 NONE
ND012_RS04905 NONE
         pcp 1089210 .. 1089237 +  -9.2  -3.93782   ATGAAAATATCACAA        GGAAAAGTGAGC GTTA GCCCATTTTTCC         TTTAATATTCAGTGA  83 48
        sdhC NONE
        sdhD NONE
        sdhA NONE
ND012_RS04940 1095359 .. 1095378 +   -10  -2.62396   TATGAGTTTATGTCG            CCTGGGAG TTTC TTCCCAGG             TGATATAAAAAGGTA  71 41
        sucA NONE
        odhB 1099642 .. 1099654 +  -4.1  -3.09878   ATAAAAAAGATAACT                GGTAA AGG TTGCC                TGTTGACTGGGTGAA  49 37
        sucC NONE
        sucD 1101969 .. 1101989 + -10.4  -4.87318   ATCTCGACATCCTAT            GGCCACCT TTTTT GGGTGGCC            TTTTTACGTTTTGAG 100 162
        cydA NONE
        cydB 1107277 .. 1107289 +  -2.7  -2.81476   CACTGTACTAAGGAG                CATAT AGC ATGTG                GTATTTTGCCTGGAT  42 30
        cydX 1107398 .. 1107408 +  -2.4  -2.53822   GAAAGCAGCCAATAA                 CGGC AGC GACG                 ATGTTGTCCGATAAG  39 1
        ybgE 1107715 .. 1107736 + -11.7  -4.35682   TGCAGCTAATTTGCC           TTATGGGTC GTCC GACCCATAA            TTATTTTCGTTCTCA 100 44
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal NONE
        cpoB 1113381 .. 1113415 + -11.5  -3.21099   CTTTAGTCTTTTTAA     GCCCAGTAATTGGTC TGATT GGCTAATTTCTGGGC     TTGATCGTGCGAAGA  84 35
ND012_RS05025 1113621 .. 1113640 +  -3.5  -3.29144   GGTTCGAATCCCGCA            CGACCCA CCATTA TGTGTCG             TTGTAAAGAAAGTAA  49 16
ND012_RS05030 NONE
ND012_RS05035 NONE
ND012_RS05040 NONE
ND012_RS05045 1114502 .. 1114525 +  -2.6  -3.77278   TTCATATCTTGGGTA          TTTTGTTT AGGATAAA AAACAAAA           TTACTTATTTTTATG  52 370
        nadA 1115678 .. 1115692 +  -4.2  -3.05597   AAATCTGGATTGATA               GGGCTA CAG TAGGCC               GTTTTGGCGGATAAC  47 46
        pnuC 1116574 .. 1116586 +  -7.7  -3.03124   TTGTTGGCACAACGC                TGCAC CCT GTGCA                TGTTGCAGAATCAGG  60 151
        aroG 1121679 .. 1121702 + -15.4  -3.92373   GAGTACTGAAAATAA          TAAACCCCGG CTTG CCGGGGTTTA           TTTATGGATACAATC 100 63
ND012_RS05110 1129258 .. 1129273 +  -3.2  -4.06384   GCACCGCCGCTGAGT              GTGACG ATAA CCTCAC               TTTGTGCTGTTCCCG  58 142
ND012_RS05120 1130384 .. 1130405 +  -5.8  -4.67563   TACGAATTTTCAGAA           CGTCTGGC TACTAT GCTGGACG            TTTTCGTTTCTGTTA  75 156
        modA NONE
        modB NONE
        modC 1133254 .. 1133265 +  -3.6  -3.34125   GTGCTGGCGAATCAC                GGCG GCAA TGCC                 TGGTTTTTCGTTGTC  48 201
         pgl 1135648 .. 1135663 +  -6.8  -4.15565   TTCAATTTGTTGAAC              CTGCTG CTGC CAGCGG               TTTTCGGCTAATAAA  71 400
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 1140685 .. 1140696 +  -4.4  -3.51232   TGCGCGAGCCAGCGC                CAAC TGTT GTTG                 TTGATTTCGGGACAA  52 350
        uvrB 1144380 .. 1144413 +  -5.3  -3.41878   CAGGAATTTCTTCTT     GTCGCATCCGTAAAT CCTG ATTAATGTGTGCGAC      TTATAAATTAGCCAC  57 186
ND012_RS05185 1144715 .. 1144742 + -12.8  -3.63092   AGTGTTTATGCTACT        CATTCAGGCTCGC AAT GCGGGCCTGA-TG        TCTTTCTGTCAATGT 100 44
ND012_RS05190 NONE
ND012_RS05195 NONE
ND012_RS05200 NONE
ND012_RS05205 1150282 .. 1150294 +  -3.3  -3.14211   GATAAGGAATATCGA                CCGCT TCC AACGG                TTGCTGAACCACGAT  46 148
        moaA NONE
        moaC NONE
        moaD NONE
        moaE 1153802 .. 1153821 +  -7.8  -2.60373   ATCTTAGAATCAGGT            GGGCTGTC GTCG GATGGCCC             GTATTCATTGTTCAT  60 105
ND012_RS05235 1154646 .. 1154667 + -13.1   -5.4251   CTAAGCAACCTGAAA           GGACACGAT TTTA ATCGTGTCC            TTTTTTATGTCTGAG 100 106
        rhlE 1162204 .. 1162225 + -10.9  -5.78622   AGTATTGACTGGAAA           CCGCCTTTA GGTA TAAGGGCGG            TTTTTTTTCGACTAA 100 47
        dusC 1163730 .. 1163742 +  -7.7  -3.83502   TTATTCTTCATCAAA                TGCAG CTC CTGCA                TTTGCTGTAAGCGTC  70 450
        pbpG 1165527 .. 1165539 +  -4.8  -3.14878   GTTTGGCTCTGGTAT                CCGA GTAAG TCGG                TATTGAGTTAAAGGA  51 18
        cyaB 1168254 .. 1168264 +  -6.8  -2.84693   ACCGCGTTCTTACCG                 CCAG TTA CTGG                 GTTATTAATCGTCAG  57 7
ND012_RS05300 1170123 .. 1170133 +  -2.6  -5.06414   CGTATTTTTCCTGAA                 TAAA TTT TTTA                 TTTTTATTCGGGAAA  70 53
ND012_RS05305 1170556 .. 1170583 + -10.7  -2.78596   TCTATCTTCTTTCAA        GAAAGGTGGCA AAGTCA TGTCACCTTTC         TCTCATAAAACCATC  77 54
        phnC NONE
        phnD 1172486 .. 1172520 +  -8.8  -4.58395   TTGATGTGATGAACA    G-GATAGCTCTGGAA CGCCAT TTCTAGAGCTATCGC     TTTTTAGGCGGTAAG 100 46
        phnE 1173537 .. 1173549 +  -3.5  -4.35116   TGCTTTACTATCTGT                TATTT TTT AAATA                TTTTGGTATCGACTG  63 158
ND012_RS05330 1175180 .. 1175199 +   -10  -3.28712   TGCGGGAAAAGAGAA            GCGTGGCA CTAT TGTCACGC             TTGTCAACAAGCAGG  76 118
ND012_RS05340 NONE
ND012_RS05345 1178926 .. 1178943 +  -2.7  -2.85657   TTTATAGTTACTTTT             TTGGACGT GGC ACG-CCGA             TGATTCAGTTTTATC  42 5
ND012_RS05350 NONE
ND012_RS05355 1180894 .. 1180904 +  -2.6  -5.00616   TCAGTTCGTACTGAT                 TAAA AAG TTTA                 TTTTTTCACAGGCGC  70 259
        adiC 1182933 .. 1182978 +  -4.1  -2.87875   GATAAAAGCAATTAA TTCATTTAT-CTCCCCCCGC AGCCAAA GCGCGGGGAGAATGAATCAG ATGTTTTAGTCTATT  46 26
ND012_RS05365 1185354 .. 1185384 +  -8.3  -5.03314   GCTGCGAAAATAAAA       GGGTTAAGGACGT TTTGC GCGTTCTTGGCCC       TTTTTTACGCCTACC 100 60
        dinG 1190649 .. 1190669 +  -3.9  -2.52464   ATTCTAACAAAAATA            GCGAGAAGG AAG CCTTGTCGA            TGGATTACCGCAAAA  44 84
        ybiB 1191684 .. 1191694 +  -5.4  -3.06696   GGCCTGTTCTTATTG                 GCAT TTT ATGC                 TATCTTACGCGCCAG  52 84
        rlmF 1192815 .. 1192848 + -13.1  -3.01422   AAAACAGAGCGAAAT     ACCTTGCGGGAGGCA TGAT TGTCCCCCGCAAGGC      TAATTTATCAGGATA  95 143
        ompX 1199223 .. 1199238 +  -6.1   -5.1861   CCAATCCAATAAAAA              TCCGC CTCCGT GCGGA               TTTTTTCGTAATGGA  87 84
ND012_RS05435 1200868 .. 1200888 +  -2.5  -3.42459   GAAGCGGTTATTCAG            GCAGTCAGT TTT ATTGATAGC            TTGCTGTTGTAGATA  48 153
ND012_RS05440 1202895 .. 1202910 +  -6.8  -3.18118   GTATTGTGCAAACGA              GAGGCG ATTC TGCCTC               TATCTTGTGGCATAA  59 77
ND012_RS05445 1204596 .. 1204624 +   -11  -3.21726   AGTCTTAATCGACTC       TCGTTCCGCGCCA TCCC TGGCGCGGA-CGC        TTGACTCTTCTCCCC  79 33
ND012_RS05480 1211561 .. 1211572 +    -3  -2.61695   CACAAAATCCGGACG                TGAT CTGC ATCA                 ATGTTTACGCCTGCC  42 153
        folE 1212256 .. 1212272 +  -2.1  -2.65832   CCAGGAATTCCTGCG              CGCGGTG CGT CACAGCA              GTTAATCCTTTTTTG  40 4
ND012_RS05490 NONE
        galS 1214733 .. 1214752 +  -7.2  -3.62046   TGTAACCGTTTTCAA            TCTGTGAG AAAA TTCACAGA             TTATTAACAAGCTCC  68 54
        mglB 1216203 .. 1216230 +  -2.8   -5.0133   GTTCTTATTTTAAAG        TGGTTTTG-ATCA CCA TGATGCAGAACCC        TTTTTTAGCCAGGTG  70 110
        mglA NONE
        mglC 1218830 .. 1218855 +  -7.7  -5.08367   GTTTACGGTAAAAAA         GCCAGTTGG-AT TGA ATGCTAACTGGC         TTTTTACTTTATATT  95 53
ND012_RS05530 1223236 .. 1223260 +  -2.8  -2.81584   TTGTTAATTTAACCG          CCGGATCA CAAAGTTCA TGCTCCGG          GGTTTTTATTCTGAC  42 34
ND012_RS05550 1226990 .. 1227021 +  -8.6  -2.84684   AGTGCTAAATCCAGA      TCATGCCGGTAAGG TTTT CCCTACCGGCAAGC       GATTTTTATTTGACC  64 114
        apbC 1230551 .. 1230562 +  -5.8  -3.57144   ATTGGCGCGTTCTTA                GCAC CCGC GTGC                 TTTGCCCCTCCACAC  59 193
         udk 1231279 .. 1231293 +  -3.6  -3.66095   TTTTCTATGGCAGTT               TTTGTA ACA TACGAA               TTTAAATGGAGATTT  53 62
         dcd 1231890 .. 1231907 +  -2.7   -2.7169   AGTCGAATTGATAAA             GACTG ATTCGTGC CAGTC              TGCTCTCCTGTTTAG  41 20
        asmA 1233793 .. 1233834 + -10.2  -3.76837   GATAAATTATAATAT TACG-TCAGGCTGGCGGGA GTGAG TTCTGCCAGCCTGATCGAG TTATTGAATTGTGTC  86 29
        dcuC 1235763 .. 1235773 +  -8.2  -2.52543   GCATCGGGGACTTCA                 CCGG CCT CCGG                 TAGATTACCGGCAAT  60 370
        galU NONE
ND012_RS05595 1239622 .. 1239639 +  -7.7  -5.26119   TTGTCATCAGTCTTA             GGCAACT TTTG GGTTGCC              TTTTCTTTTTGGCAG 100 257
        gndA NONE
ND012_RS05605 1241436 .. 1241460 +  -5.6  -5.45802   TATCTCAATAAAAAA          CGCTCGCGAT GATCA GTCGGGGGCG          TTTTTCTTTTGCCAG  90 46
ND012_RS05655 1250428 .. 1250443 +  -8.2  -3.12999   AATCCATCCATTTTT              CGGCGC TGGC GCGCTG               TTGGATATCAGATAG  64 467
ND012_RS05670 1253439 .. 1253451 +  -6.9  -3.34715   AAGACGTAATAACTG                CGGCG TGA TGCCG                TGTTTAAGGCGGATC  59 359
ND012_RS05685 1257522 .. 1257547 + -14.7  -4.96468   TCGTTAAATGAACAA         CAGGGCCGTTG ATAA CTACGGCCCTG          TTTTATTTCAGTTTG 100 56
ND012_RS05730 NONE
ND012_RS05735 1268633 .. 1268662 +  -9.9  -3.43187   GGTTATCCATTAATT       TAGCTGGCCGCCA CCCT TGGCGGCATGCTG        TTACTCATTTTTCTC  78 28
        potF 1270202 .. 1270217 +    -9  -3.26814   TGCTGCCTATTTTCG              CCGCAT ATTA ATGCGG               TCTGTTCTGCTTTTA  71 94
        potG NONE
        potH NONE
        potI NONE
ND012_RS05760 1273757 .. 1273771 +  -2.8  -3.84246   CAACGTTTTTTCCGC               CAGTCA AAA TGAGTG               TTTAGTCGTTGGGGG  52 14
        rlmC 1275091 .. 1275107 +  -2.3  -4.42653   CGCTTATTGCGGGAA              CCATT TGTCGTT AATGG              TTTTATAGCTGCCGT  60 115
ND012_RS05800 1280696 .. 1280710 +  -3.5  -2.57136   AATGCTGCACAATAG               TGCGT AAAGG ACGCG               GTTGCTGGTTGGTAA  42 362
ND012_RS05835 1290544 .. 1290558 +  -3.5  -4.29738   TTGTCTTTTTTCTGT              C-GGCG ATAA CGCCAG               TTTTGGTAAATATGG  63 259
        macA NONE
        macB 1294630 .. 1294652 + -11.3  -4.18494   GTATAAAAACAAAAA           TGCCAGTCG AATAG CGGCTGGCA           TTTTGAATCGCAGTG 100 90
        clpS NONE
        clpA 1297944 .. 1297961 +  -9.9  -5.71295   TTGAATAAATGGAAG             GGCGATA GCGA TATCGCC              TTTTTATTTTTCTGT 100 87
         lrp 1305618 .. 1305644 + -17.4  -3.26947   TTATTCATACAGTTT         CAGCGCCGAGAA GGG TTCTCGGCGTTG         TTGCTATACCAATTC 100 83
ND012_RS05900 1309291 .. 1309307 + -15.1  -3.28712   TCATCACGTTATAAA              GGGCCGC ATC GCGGCCC              TTGTGCAAAGAAGCG 100 59
        lolA NONE
ND012_RS05910 1311441 .. 1311454 +  -3.9  -2.78018   GGTCATTGCGGTAAG               GTTAT CTTT ATAAC                TACTTGGTAAGCGGT  45 44
        serS 1312869 .. 1312885 +  -9.4  -5.47431   GTTAGATGGTAAAAA              GCCTCG AAATA CGAGGC              TTTTTTATGTCTTCA 100 57
ND012_RS05920 1314500 .. 1314520 +    -9  -4.00782   CATATTCTGAGTGAA            TTCGCCCA GCATA TGGGCGGA            TTTATCGTCATCTGA  78 260
        ansB 1322367 .. 1322379 +  -4.1  -4.68384   ACGATGGTCACTGTG                CGAGA CAC TTTCG                TTTTCTTGGATGAAT  68 236
        serC 1323607 .. 1323629 + -11.3  -3.18264   TACTACGCCTTAAAA           TAACCCCGG CATGT CCGGGGTTG           TTGATGAATAAAAGA  84 68
        aroA 1325112 .. 1325142 + -10.4   -3.5774   TAGGGTAACAGTTCT       CGCAGATGCGGCGT ATA ATGTCGCACCTGTG       TTTGCCCGCTTGGGT  82 188
         cmk NONE
        rpsA NONE
        ihfB 1328100 .. 1328118 + -11.7  -5.50723   TGTGAAAATACGAAA             CGGTGCC TTTAT GGCACCG             TTTTTCTTTTACTAA 100 69
ND012_RS05975 NONE
        msbA NONE
        lpxK 1333490 .. 1333529 +  -3.5  -4.24342   AGGAGCGCAGGCAGA  TTCAGCGCCTGCGCAC AGTCCACGA GTGAGC-GGCGCTGCG  TTTCTTGATACAACG  60 61
ND012_RS05995 1335653 .. 1335667 + -11.4  -5.32565   TTAAAAATTATAAAA               CCCGCA TTA TGCGGG               TTTTTTCATTAATTC 100 118
ND012_RS06000 1335993 .. 1336022 + -11.5  -4.13282   GTGATCGCTTTCTAA       AGCAAACGGCTAC CTCG GTAGCCGTTTGTA        TTTTAGCGATGTAAT 100 26
ND012_RS06005 NONE
        kdsB 1337383 .. 1337407 +  -4.8  -2.95007   CTTATTTATTCTAAA          CGCCGGGTTG CCAGT CCTCTCGGCG          TCGTTATATTGACTG  50 68
ND012_RS06015 1338807 .. 1338822 +  -6.8  -3.86897   TCTGCAACCCCTGCT              GCGGTG CGAG CACTGC               TTTGTACACCGTCAG  66 412
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 1346735 .. 1346754 +  -7.8  -4.77036   GGGAATAAATCAAAA            TGGTCGCT TTCG GGCGGCCA             TTTTTAATGGTGCAA  91 62
        ldtD NONE
ND012_RS06050 1349573 .. 1349593 +  -4.7  -3.35438   ACCGTTTCAGACGGC            GGCTTCA CTGGAGT TGGAGCC            TTATGAAATATCATA  53 66
ND012_RS06055 1350456 .. 1350472 + -13.7  -4.29106   TGTCATTAACCCCAA              GGGTGCC TTA GGCACCC              TTTATTCATGTGCGA 100 238
        pepN 1359450 .. 1359492 +  -4.3  -4.26871   GAGTATTTATCGCCG TCATACCGAAGTAAAAGACA AGGA TGTCTTTCTCTTCGG-ATAA TTTATTAGTGAGTTA  63 52
        pyrD 1360888 .. 1360919 +    -8  -3.30825   TATTTGTATTGTTTT      CGGCCTAGGGGT TTATTTCT ACCCCTAGCTCG       TCTATATTTTATCCG  66 42
ND012_RS06090 1361947 .. 1361971 +  -5.7  -2.52623   GGCATGATAAGGACG          TGAGGGTTTAG TCG CCAAAACCTCA          ATATTATCACCGACG  50 380
       rlmKL NONE
ND012_RS06105 1366947 .. 1366994 +  -7.2  -5.03314   ACTCAAAACCGCTAA AACCGTTCTGCTGC-CAAAAC ATAAAGC GTTTTATGTAGCAGAACGGTA TTTTTTGGCGCTGAA  89 81
        pqiA NONE
        pqiB NONE
        pqiC 1370732 .. 1370752 +  -4.7  -4.54026   TCTATTTCTTAATCG            TGGTTGTAT GCA AAGCAACCA            TTGTTTTCTTTCCAG  68 232
         rmf 1370988 .. 1371006 + -12.4  -4.54727   TTCGACAGAGGATAA             CCTCCGCT TTA GGCGGAGG             TTTTCATTTCGGGCA 100 52
        matP 1374325 .. 1374339 + -12.8  -5.24129   GGCAGCAAAAAAAAA               CCCCGC AAA GCGGGG               TTTTTTATGAAGAAG 100 83
ND012_RS06155 1377267 .. 1377279 +  -4.1  -4.42386   AACTTGCTGCAACAC                CAAGG GTT CTTTG                TTTTCTGGATCGGGA  65 143
        helD 1382347 .. 1382367 +  -6.1  -3.96068   CAGATAGCGTTGATA            GTCGGGAAT GGT AATCTCGAC            TTCTTGTTCAAATAG  64 190
ND012_RS06185 1384442 .. 1384459 +  -2.6  -4.59511   AAACCAATAAAAAAA             CCTGAC GCTAAA GCCAGG              TTTTTCCGCGGTATT  64 141
        yccX 1386758 .. 1386789 +  -5.8  -5.07486   TTCGCAGGGCCTTTC      GGGAAAAGGCGATA CAGG TAGCGGCTGTTCCC       TTTTTCTTCGCCGTA  85 134
ND012_RS06210 1387712 .. 1387724 +  -3.4  -3.69395   TGTTCATTGGCAATA                TCAG CGGTA CTGA                TTGTTAGCTGATAAA  51 382
ND012_RS06235 NONE
        mdoH 1396788 .. 1396814 + -13.8  -4.36729   CTTCAGTCATTATCA         TGGGCAATGTGT TCT GCACATTGCCCG         TTTTACGTTATTCAT 100 55
ND012_RS06245 1397440 .. 1397461 +  -3.6  -3.91506   ACGAGCATAAAAAAA           GCCAACCT AACATC GGGCTGGC            TATTTTTCCGCATCA  58 41
ND012_RS06265 1402526 .. 1402557 +    -6   -5.9873   AAATTAAGTTTAATT      TGAGGAATCG CTCTGTTATTTT CGATTCCTCA       TTTTTTTTATCATCA 100 93
ND012_RS06270 1403901 .. 1403915 +  -2.8  -3.41554   ACCAACCAGCGAAAT               CTGCAA TAA TTACAG               TTAAATTTATTCTTG  48 268
ND012_RS06300 1409060 .. 1409112 + -10.2  -3.84523   CTGATACCTCCATGT TCTAATACTGTGTTATTTCGCGGAA TTTT TTTAGCGAAATAACACAGTGCT-GA TTGTCTTATCTTACT  86 37
ND012_RS06305 1411032 .. 1411066 +   -15  -3.16492   AGGCAGGAAAAGAAA     AGGCCTGAGTTCTGTG AAG CACAGCGCTCAGGCCA     TATTAGTCACTCTAA 100 162
        rluC 1416393 .. 1416417 +  -6.5  -3.52164   CCCCGCACAATTCCA          CGGTTGTTCAA GGG TTAAATAACCG          TCTATTTCTTTATCA  61 298
        yceD NONE
        rpmF 1417691 .. 1417708 +    -2  -3.49475   ACTTGCTAATCATTA             G-CAAGG CGATA CCTTGAC             TTGTCTAACCCTAGC  47 46
        plsX NONE
ND012_RS06340 1419674 .. 1419684 +  -2.4  -2.98982   CGGTGGCTTTACTTG                 GGGC TCT GCGC                 TGGTTCGTTTTTGAT  42 1
        fabD NONE
        fabG 1421531 .. 1421544 +  -2.3  -4.25848   TAAACTACGAAAACC               ATCGC GAAA GCGAG                TTTTGATAGGAAATT  58 144
        acpP 1421814 .. 1421838 + -10.8  -5.40072   AGTAAGCGAACATAT         C-TAGGCGGTC ATTC GACCGCCTAAG          TTTTTTTGCCCCAAC 100 36
        fabF 1423156 .. 1423169 +  -9.5  -5.65177   ACAGATAATAAAAAA               CCCGG TTAT CCGGG                TTTTTTTATGCCTCT 100 57
        pabC NONE
        mltG NONE
         tmk NONE
        holB NONE
ND012_RS06385 1427684 .. 1427707 +  -5.3  -2.91061   TAAACGAGTAATGTT          TCCACCC TATTTATAAC GGGTGGA           CGTTTTTTATTGACA  52 71
        ptsG 1429398 .. 1429413 + -10.4  -5.61824   CCGGGGAGTGCAAAA              GGAGGC GAAA GCCTCC               TTTTTTTGCGTTTTA 100 47
        hinT 1430042 .. 1430052 +  -3.2  -3.40403   AATAGTTGGGTAGGC                 CGTC AGT GATG                 TTATCCTGCCCGACC  47 36
ND012_RS06400 NONE
        lpoB NONE
        thiK NONE
        nagZ 1433025 .. 1433043 +  -4.5  -2.72991   GGGAACTAAGTCACG             CATCGGG GAATA TCCGGTG             TGGTTGACCCTGTCG  48 32
        ycfP 1433637 .. 1433671 + -18.1  -5.27335   AACCTGATGACAAAG     GCCCAAAAAGATCGT TCACC GCGATCTTTTTGGGC     TTTTTCTTTCGCAAA 100 47
ND012_RS06425 1435311 .. 1435346 + -14.2  -4.37092   ACACCTTCGGTAGCA    CAGAAAACCGTTGTCA TTCG TGGCAGCGGTTTTTTG     TTTTATCACGCCGAT 100 75
ND012_RS06430 1436290 .. 1436307 +  -5.5  -3.90291   AACAGAAAGTAGGGA             CAACGGG CAAA CCGGTTG              TTTGGTTAAGCGAGT  61 106
        lolC NONE
        lolD NONE
        lolE 1443292 .. 1443302 +  -3.2  -3.35996   GGCAATAAATGACGA                 GTCA CCA TGGC                 TTATCAATACGAGTA  47 33
        nagK NONE
        cobB 1445195 .. 1445209 +  -6.4  -4.52589   GCAGGGGCATCATTA               TGATGC CTC GCGTCA               TTTTATGTCAGCGGG  74 65
        pepT 1446633 .. 1446659 + -12.2  -3.09925   GCTTCAACAAAAAAA         CGCCCCTAAGGT AAA ACCAAAGGGGCG         TAGTTATTTCTATAT  86 63
         icd 1456779 .. 1456804 +  -7.5  -4.64598   ATAGTTTGATAAAAC         TTCACGGGGGC TTAT GCTTCCGTGGG          TTTTTCAACTAGTTA  81 46
ND012_RS06520 1458596 .. 1458609 +  -5.3  -3.34902   CTCGATTCGATATAG               TTACC TTCC GGTAA                TATTATATCGTCGAA  54 373
         dcp 1463661 .. 1463680 +  -7.8  -3.00825   AACCCATATGACAGA            GGGGCATG AATG TGTGCCCC             ATTATATTTTATGGA  62 39
ND012_RS06550 1466945 .. 1466963 +  -2.4   -5.0538   TGCGTAGCGTCTGAC             TGGTCAAA CCT TTTGGCAA             TTTTTTGCGCTCACC  73 363
ND012_RS06565 1472014 .. 1472030 +  -5.9   -4.0641   GTAAGAAGAGTGAGC              GATCAGA TGT TTTGATC              TTTGTGTCAGTCCAA  66 496
ND012_RS06570 1474012 .. 1474032 +  -7.6  -4.57482   TTAAATACCGCCACT            GGCTGATT AATTC GATCAGCC            TTTGTTTATCACTCG  82 51
ND012_RS06575 1474688 .. 1474718 +  -4.1   -3.0873   GGTGTCATTGTGCTA      CGTCGAGTACAGGAG TGA TTTCTG-AC-CGACG      TATTCCCGTGATTTC  49 8
ND012_RS06580 NONE
ND012_RS06585 NONE
ND012_RS06590 1479283 .. 1479298 +  -3.3  -3.18389   GACGCTGAAATAAAA              GGAAA ACTGCG TTTCC               TCGTTTTCATCTTGG  46 42
ND012_RS06595 1480555 .. 1480579 + -15.7    -4.258   TCGTATTGATGGCAA          GCCGATCGGGC AAT GCGCGATCGGC          TTTATTCATGACTGG 100 32
ND012_RS06605 1482975 .. 1482987 +  -4.7  -4.49939   TAGTGTAGGTGAAAG                CCGCG CTT CGCTG                TTTTCTAAGTTGTGT  68 388
        phoH 1484396 .. 1484416 + -13.3  -3.58726   AAATTAATGCCAAAA            GGGCAAGCG CTA TGCTTGCCC            TTGTCTATCCAAACG 100 61
ND012_RS06645 1493052 .. 1493073 +  -5.7  -5.42862   TTCAGTAGCAAAGAA           CCGGGTGCC AAAA GTGACCCGG            TTTTTTTGGCGATAT  90 52
ND012_RS06650 NONE
        astA NONE
        astD NONE
        astB NONE
        astE 1500447 .. 1500458 +    -3  -2.68823   CTAATTTGGTGCGTG                CATA GCAT TATG                 GTTATATGGGAACAA  42 479
ND012_RS06675 1501865 .. 1501880 + -11.8  -5.26316   ATTGGTGCATAAAAA              GCGGGG ATAT CCCCGC               TTTTTTATCCACTAA 100 81
ND012_RS06695 NONE
ND012_RS06700 1507317 .. 1507332 +  -4.6  -4.74706   AAATATAGTCATAGC              GCGGCA AATC TGCCGG               TTTTTCAATATTGGG  73 416
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE NONE
        flhA 1530296 .. 1530311 +    -9  -4.09739   AACTGCCCCCTTAAT              CGTTGG GTAT CCAACG               TTTTGGGGCAGTTCA  83 310
ND012_RS06810 NONE
        pefC NONE
ND012_RS06820 NONE
ND012_RS06825 1535583 .. 1535607 +  -6.3  -3.09273   GCGTAGAGCTTCAAC          CTGTGGAGCCG AAC TGGATCCCCAG          TGTGTATTCGGCGAC  57 418
ND012_RS06830 1536326 .. 1536336 +  -2.6  -3.19668   TACAGTACGTAAAGT                 TATT TAC AATA                 TTGGGTTACATAATG  44 50
ND012_RS06835 1537119 .. 1537129 +  -4.6  -3.82084   CTCACTGTCTGCAAG                 TCGC GAC GCGG                 TTATTAATGTTGAAA  59 8
ND012_RS06845 1539588 .. 1539622 +   -10   -2.7644   TTATTGGCAATGATG     ACCGATTCTCCGGC TATTGGT GCCGGAGAATCGCA     ATTTAGGCGTTGGCT  72 51
        ychH 1540912 .. 1540937 +  -8.9  -5.69262   CCCAAGAGTAGAAAG         CCCGTTGTTGC TCAC GCTTCAACGGG          TTTTTCTTTTTCTGC 100 145
        hemA 1545171 .. 1545181 +  -6.8  -2.73969   ACGCGACAGCCTTGG                 GCTG GAT CAGC                 ATTAGTTTCCTCAAT  57 10
        prfA NONE
        prmC NONE
ND012_RS06890 NONE
       sirB1 1548391 .. 1548402 +  -3.6  -2.82933   TACTGACTGGATACG                GCGT TGTG GCGC                 TGTCATGAATTCCGA  45 41
        kdsA 1549332 .. 1549360 + -11.7  -5.20216   AAACGGGTAAAAAAA        GGGCGATGTAGTG AAA TACTACGCCGCCC        TTTTTTCATGCTCTG 100 61
ND012_RS06910 1552804 .. 1552824 + -16.9  -4.27617   GCGGCAAAAGAAAAA            GGCTCCGAC GTT GTCGGAGCC            TTTTGCTCGAATATG 100 57
ND012_RS06930 1556335 .. 1556357 +  -4.1  -3.16177   ATTATTCAGATTTAG           GGCGGAG TTTATTTCT CTTCGCC           TTGCATCTCTCCGCT  49 50
        ghrA 1557395 .. 1557409 +  -3.5  -2.78384   TTTTGGCTCGGCTGG               GCGGA CGATT TCTGC               TATGCTGAGCGAACG  45 62
ND012_RS06940 NONE
ND012_RS06945 1558878 .. 1558900 + -14.9  -3.14218   GCTAATGTCTGAATA           TAGCCCGCC ATTTC GGCGGGCTA           TCGTTTTAGTCGGTA 100 55
        rimJ NONE
ND012_RS06970 NONE
ND012_RS06975 1563786 .. 1563803 + -12.7  -3.53779   ATCGGGTTGCACTGA             CGCCTGC TTTT GCAGGCG              TTGATATTTTCAGCG 100 118
        murJ 1565428 .. 1565443 +    -9  -5.51402   GAGGTAATATTTCAA              CCCGAT AATG ATCGGG               TTTTTTTACGTCTAT 100 80
ND012_RS06985 1567562 .. 1567578 +  -4.5  -3.12668   TATCAAAACGAATGG              GAAAAGA TGA TTTTTTC              TATTCAACTTTACCA  51 262
ND012_RS06990 1572041 .. 1572073 + -14.3  -3.40299   TAAAATTTCTGAACC      TAAATGCCAGTCGAT GAT AACGGCTGGCATTTA      TTGTCGGTATCGTCA 100 56
ND012_RS06995 1573001 .. 1573014 +  -9.5  -4.74801   TATCATTAACCTCAA               GGCCC ATTA GGGCC                TTTTTAGTCAAATTC 100 225
ND012_RS07005 1575850 .. 1575862 +  -7.7  -3.47078   GTCAGGTCGTTGAAC                CCTGT TTT ACAGG                TTGTGATATGAGCTG  68 197
        cutC 1576676 .. 1576701 + -13.3  -2.71712   TCAGCCTGATATAAC         CAGCCCCGAAA ATGT TTCCGGGGCTG          ATTTACCGCCAGCAA  93 32
ND012_RS07035 NONE
        aspS NONE
        nudB 1583152 .. 1583165 +  -5.3  -2.71681   GTGAGTTCCGATAAA               CTTAC GTCA GTAAG                TGATTCGGCGAGTTG  49 37
ND012_RS07050 1584022 .. 1584046 + -13.6  -4.44608   CAGCGCTGTGAAGTC          GCCGTGCTCA TTGAT TGGGCACGGC          TTGTTTTTAGGTGGA 100 57
        ruvC 1584672 .. 1584691 + -12.2   -5.5208   GGGTTTATCGCCGAG            GGCTGGAT ATCC ATCCAGCC             TTTTTTGTGTTATAA 100 76
        ruvA NONE
        ruvB 1586441 .. 1586466 + -13.3   -2.9856   CAGCGGTGATATAGC         GCGGAGCCAAG CAAT CTTGACTCCGC          ATTATTTACCCTTTA 100 65
        znuA NONE
        mepM 1592408 .. 1592424 +  -5.2  -3.75766   AACCTGATATCCGCT              TTATGC GATCA GCATAA              TTATTGCATTCTCAA  61 150
        lpxM 1593487 .. 1593511 +   -10  -5.45652   ATAAATAAAGAAAAA          GCCAGTCAAC TTCTC GCTGACTGGC          TTTTTTATTAGCGAT 100 65
         zwf 1598078 .. 1598090 +  -3.3  -4.56597   TTCCTTGGGACTTCG                GCTGG GTG CCATC                TTTTTAACCAACGCC  63 232
ND012_RS07115 1598872 .. 1598898 + -10.2  -5.44119   GCTTTAGTCGAAAAA         CAAAACCTCCAA ATT TAGGGGGTTTTG         TTTTTTTGAAATAAC 100 77
        mdtJ 1599792 .. 1599807 +  -3.2  -2.58579   CAAGTCAGGTGGGGA              TCATGC AGCA GCTTGA               GTTCTACCACATTGC  42 10
        mdtI 1600253 .. 1600274 +  -2.9  -6.25741   GCCAGCCGTCTGAAG           GTAGCCGGT CAAA ACGGGGTAC            TTTTTTTTATTCTTT  95 155
ND012_RS07135 1602715 .. 1602726 +    -3  -4.72272   TGCGCGCCCTGTGTT                GAAT ATAG ATTC                 TTTTTCCTGCCGAGG  65 69
        tsaB NONE
ND012_RS07145 1604121 .. 1604144 +   -11  -5.75342   ATATGAATCAATAAA          CGGATGCCGA GTTT TCGACATCCG           TTTTTTTTACGGCAA 100 57
        fadD 1606259 .. 1606288 + -20.9  -3.03214   TCACAGGCTCATCAT       CAACAACGCCGGT AAAC ACCGGCGTTGTTG        TGTCTGTCATAGGTT 100 50
         rnd 1607625 .. 1607652 +  -8.5  -3.83502   CCAATAGAATTCAAG        CATCCCCTGTA AATAAA TACAGGGAATG         TTTGATATGCCGATA  75 204
ND012_RS07175 1610520 .. 1610531 +    -3   -3.1247   TGGCGGATAGCATGA                CAAT GAGT ATTG                 TTGAATATCGGCACT  46 133
ND012_RS07180 1611301 .. 1611318 +  -5.5  -2.51547   CATCCCAGACAGCGC             GCGGGTG GCAA CACTTGC              ATCTTCGTGTCAAAA  49 54
ND012_RS07185 1612021 .. 1612041 +  -2.6   -3.8579   CCCGAGCTTAGTGCC           CA-GCATGC AAAA GTATGCCTG            TTTGAATTCTTCAGT  52 222
ND012_RS07195 1612888 .. 1612917 + -18.1  -4.09685   ATATTATTCTGAAAA       TGATAAAGGTGCC ATTT GGCACCTTTATCA        TTTTCAGAACTCACC 100 76
        fadR 1616383 .. 1616397 + -11.4  -2.93703   TGTCAGCAGTCTGAA               GGAGCC GTT GGCTCC               TATCTCGATGGTTGT  83 188
ND012_RS07220 1619778 .. 1619802 +    -7  -3.26471   CTTAATGACCTGCCA          GGAGGCCAGC CCAGT GCTGACCGCC          TTGGTGTGCGCCTGC  61 45
        dadX NONE
        budA NONE
        alsS 1629885 .. 1629902 +    -7   -5.4505   AGAACCCACTAAAAA             CCGACT AACATC AGTCGG              TTTTTTATTAGGCAG  91 139
ND012_RS07270 1633906 .. 1633936 +  -5.4  -3.66028   TATGAGCGAGTCATG       CCACTAAGATTTAC CTT GAAAATCATCGTGG       TTATTGCGAGTTATG  59 311
ND012_RS07275 1635088 .. 1635100 +  -3.3  -3.86307   TAAAAGTGAATAATG                GCAGA GAT TCAGC                ATTTTTTGTTAAAAC  53 334
ND012_RS07280 1636914 .. 1636930 +  -9.4   -5.1244   ATGTCAGCAATCTGA              TGGGGC GTAAA GCCCCA              TTTTTGTCTTGGTGC 100 205
        msrB 1639799 .. 1639822 +  -2.4  -3.66908   TGGCGATCAGGTGGC          CGGTTAATCA GTGA TGATAAAGCG           TTAATTTTCAGAAAA  49 19
ND012_RS07300 1640332 .. 1640349 + -11.3  -4.33274   GTTATTACCGTTAAA             CCGAGCT AATT AGCTCGG              TTTTCGTGGTATCCC 100 207
ND012_RS07320 1644789 .. 1644815 +  -2.8  -3.46511   TCTGCTTTGTGAGCA         GGCTAACTGCTG AAC CGGCAGTGCGAC         TTATCAATTCTCTCC  48 92
        selD NONE
ND012_RS07330 NONE
ND012_RS07335 1648406 .. 1648420 +  -5.7  -3.76224   GTAAATAAATTCTGC               GTGAC GGTAA GTCAC               TTTGCTGGCTGGCAA  61 197
ND012_RS07355 1651992 .. 1652007 +  -6.8  -4.32177   ACACCTTTAATACAA              CTCCTC GCAG GGGGAG               TTTCTTATAAGATGC  74 83
        rssA NONE
        rssB 1657304 .. 1657323 +  -3.6  -3.70051   TCTATTCCCGTATCT            TAAGGTTT TATT AATCCTTA             TCTTTTAGACTATTT  53 144
ND012_RS07395 1659568 .. 1659586 +  -6.6    -3.922   ATTGATATTTAGCCG             GACGAGCG GCA CGCTTGGC             TTTGCTTGCAACTTT  66 505
ND012_RS07405 1661411 .. 1661449 + -10.3  -2.66787   TGGGGGACACAAAAA   GAAACCCCCTCAATCAG GAAGG CTGATTGAGGGGGTGGA   TAATCTACCTATTAC  74 248
ND012_RS07420 1665518 .. 1665548 + -10.4  -5.32944   TAACCATTCATTATA       CCGGTCAGCGGA TGATTGC TGCGCTGGCCGG       TTTTTTACTTGTGCA 100 38
ND012_RS07425 1667960 .. 1667970 +  -4.6  -3.37493   ATAAGGTGTAATTTC                 CGGC TGA GTCG                 TTCCTCTGTTGGAAA  53 119
        oppA 1669715 .. 1669738 + -13.2  -4.39998   ACTAATCATCTTGAG          GGCAGTTTCC TACG GGAAGCTGCC           TTTATTATATCGATA 100 36
        oppB 1670691 .. 1670705 +  -2.8  -2.56715   ACGTGTTATATGCCG               TTATCG ATC CGAAAA               TCCGTTACTGACACT  41 0
        oppC NONE
ND012_RS07445 NONE
        oppF 1673678 .. 1673703 +  -8.9  -5.80727   TTTAATGGCAAAAAA         GCCCCGCCATT TTGC ACTGGCAGGGC          TTTTTTCTTATTTTT 100 52
ND012_RS07465 1676165 .. 1676195 +  -6.3  -5.59879   AACGGAAGAGAATAA       TAAAAACAGTTCT GTAAA GGGGCTGTTTTTA       TTTTTTCTATTTATA 100 39
ND012_RS07470 1677416 .. 1677443 + -14.3  -2.94527   CCGATAAGCATTTTA        TTGGCAGGAAC ATGCGC GTTCCTGCCAA         TCGTTATCTCTATTG 100 41
ND012_RS07475 1677587 .. 1677597 +    -4  -3.92746   AAATAACTCAGACAG                 GAAA CTC TTTC                 TCTTTTTCGGATACC  59 60
ND012_RS07490 1679859 .. 1679869 +    -4   -4.5265   TTATCAAAAGTCATC                 TCAA CAT TTGA                 TTTTATGATGTAATT  68 448
ND012_RS07505 1682531 .. 1682541 +    -4  -2.72639   CGTTTTGGACTAAAA                 TGAA TTT TTCA                 GGTTTTATTTAATAA  45 183
ND012_RS07510 NONE
ND012_RS07515 1685966 .. 1685978 +  -6.9  -3.25088   GCATAAAACAGCACG                CTGGC GAA GCCGG                TTGCTGCATTTGAGA  61 44
ND012_RS07520 1686446 .. 1686464 +  -3.1  -4.20806   GCTGCGGTGTTATTA             CCCTG AAGGAATGA CAGGG             TTTCATTTTACAATA  58 20
ND012_RS07525 NONE
ND012_RS07530 1688462 .. 1688473 +  -4.4  -3.09015   ATTTAAACTTGGCGG                CATC AGAG GATG                 TTGAATCACTATGCA  49 425
ND012_RS07535 1689273 .. 1689300 +   -15  -4.39571   TCAGTCATTAAAAAA        GGGTCGCATGTGA ATT TCAC-TGCGACCC        TTTTACATTTGTCAC 100 80
ND012_RS07550 NONE
        ompW 1694665 .. 1694685 +  -9.7  -4.78597   TCTGGTTAAAAAAGG            GGAGGCG CATTCGA CGCCTCC            TTTATTTATTGTTGA 100 57
ND012_RS07605 NONE
ND012_RS07610 1703944 .. 1703956 +  -3.3  -2.77166   ACTAGCCTGTTTCAC                CGCCT ATT AGGCA                CGTTTTTTGACATGC  43 112
        rluB 1705061 .. 1705088 +  -9.2  -4.53303   AAAGCGGTTAATCTG        ATTGCCGCAG-AC CGA GTGCTGCGGCAAA        TTTTCTCTCCGAATA  95 42
        sohB 1707967 .. 1707992 + -11.1  -4.39426   GCTATTAATAGAAGA         AAGCAGGGGGC TGAT GCCCCCTGTTA          TTTTATGACGCTCTG 100 74
        topA 1711370 .. 1711386 +  -5.8    -5.626   TCTCAGCATAAAAAA              CCAGTC TTAGT GGCTGG              TTTTTTTATGGGCTA  95 65
        cysB 1713014 .. 1713024 +  -4.6  -4.98531   TGATAAACCACTTTC                 CTCC TAC GGGG                 TTTTTCATTTAAAAA  77 361
ND012_RS07650 1713999 .. 1714022 +  -3.2  -5.76633   CTAAATTATCCCAAA          CACTGGAG-AT GAT ATCCTTCGGTG          TTTTTTTATGTGTAC  88 227
ND012_RS07655 NONE
ND012_RS07660 1715284 .. 1715300 +  -6.5  -2.80988   AACAACGTACGCAGC              GCGGATG TTT CATCCAC              TGATTGATCATATGG  55 2
        acnA 1718227 .. 1718244 +  -8.3  -5.14563   ACACTGTAACGAAAA             GGGTGGG CTGG CCCCCCC              TTTTTTGCTGACAGA 100 48
        pgpB 1719998 .. 1720012 +  -3.5  -4.12841   TATCATACAAGTAGG               CTGTC ATAGC GGCAG               TTTCTCATTACTTTT  60 103
ND012_RS07680 NONE
        lapB 1722135 .. 1722150 +  -6.1  -5.86965   AAGCGAATGCAAAAA              GAGCG ACCAAG CGCTC               TTTTTTTTGATGCCT 100 494
        pyrF NONE
        yciH 1723921 .. 1723947 + -12.4  -4.34402   GTTGAATATTGACGT         CGGCCATATC CAGTGCA GATATGGCCG         TTTTGCTGTGACAGA 100 36
         fsa 1725493 .. 1725524 +    -8  -4.37886   TAAGTTCCTTTACCG      GCAGATTTCGCG CGATACAT CGCGGCATCTGC       TTTTGTCAACAATGC  78 209
ND012_RS07750 1734490 .. 1734503 +  -9.5  -3.54424   ACTCGTGCAATGGCA               GCGGC AACC GCCGC                TTTACGCGGGTCGAC  74 183
        tehB NONE
ND012_RS07785 1742799 .. 1742811 +  -4.1  -3.35349   TACTCCCGCGTTAAT                TCATC TCT GGTGA                TTATCCCGATTATTT  51 27
ND012_RS07790 1743922 .. 1743964 + -11.5  -4.70515   GCGGATACATTGCCG TGACTAAAACAGGATCGGA TAATT TACGATCCTGTTTTAGCTA TTTGTTTTAGCTATC 100 23
        fumC 1749915 .. 1749941 +  -9.4  -3.78736   ATTCTGCATTTATTA         CACGCTGGCATT AGG ATTACCAGCGTG         TTTACTGCGTCTGTG  81 52
ND012_RS07820 1752901 .. 1752911 +  -3.2  -4.19177   AAACGGCAAAATTGC                 GGAG TAA TTCC                 TTTATGTTAACGCGT  58 266
        bioD 1753954 .. 1753976 +  -4.8  -3.57263   GGTGCGCCGGAACCA           CTACTGGC TAATACC GCCAGCAG           TTTACAGATCAAAAT  55 396
ND012_RS07845 1756419 .. 1756455 + -10.2  -3.14211   GAATACGTCCTTGTA   GGCTCGT-TCTGCGCCA TTTC TGGTGCGGATACGGGTC    TTCCTCACCAGAAAT  77 138
ND012_RS07860 1759762 .. 1759789 +  -5.7  -4.74801   TTTAATGGCTGAGAA        TAAGCTAATAC AAAAGG GTGTTAGCTTG         TTTTTCATACCATTC  78 108
ND012_RS07865 NONE
ND012_RS07870 1761849 .. 1761861 +  -9.1  -3.28712   GGGCAGTTTAATTTC                GCCGT GTA ACGGC                TTATCAGAAACACAG  69 312
ND012_RS07880 NONE
ND012_RS07885 NONE
ND012_RS07890 1770392 .. 1770429 + -13.5  -2.95527   TCACCGTGACTTATT   GTCCATCAACGCCGCTA ACTT TGGCGGCCTTGATGGAA    TCGTTTGGGGTTATT 100 65
ND012_RS07910 1774354 .. 1774378 +  -7.3  -3.18681   CAGCGTTCGTGCTGA          CTGCTATTA ATCAGGC TAATAGCAG          TTGCTGCAATTCAGA  62 73
         ogt 1779435 .. 1779455 +  -3.9  -3.29461   GAGGGTTATCTTTTA            GCGCGCTAA GTG TTGTTGCGC            TTATCAGACGCCTTA  49 17
         fnr 1780277 .. 1780313 +    -6  -3.79482   CGCTGTAACATATGA    TGCCAGATTAATAACT CACTT ATTTATTGGTCTGGCG    TTCTCTTCTCCTGTT  63 33
        uspE 1781791 .. 1781801 +  -6.8  -3.60792   CAACACCTCGATCTC                 GCGA GTG TCGC                 TTTGGAAGTTGGCCC  61 459
ND012_RS07955 NONE
ND012_RS07960 NONE
ND012_RS07965 1786865 .. 1786879 +  -8.6   -2.7083   GCAACGTTAGCCGCC               GACTGA CAA TCAGTC               TCGCTTTCTACACTC  63 31
ND012_RS07970 NONE
ND012_RS07975 1788522 .. 1788545 + -10.4  -5.98675   TTGTCGGCAAAAAAA          TCCGGAGGCAA AAG TTGC-TCCGGA          TTTTTTATTTTTATC 100 42
        ydgH 1793038 .. 1793060 + -15.6  -3.63991   TTCAAATAATTGTAT           TGGGGCAGCC TTC GGTTGCCCCA           TTCTTCCCACTGATG 100 32
ND012_RS07995 1794792 .. 1794804 +  -4.7   -3.1855   GCGTTATTTTCCCTT                AGCGC ACC GCGCA                TTGAATATTAAAAAC  51 131
        rstA NONE
        rstB 1798370 .. 1798396 +  -2.9  -3.76411   ATCCGGATCAAAATG        TCCTCCGGCAGC TCCG GCTGC-GATGGA         TTTACCTCCTTTTAA  51 476
         asr 1801928 .. 1801946 + -11.7  -4.65895   ACCTGACTCACTCAA             CACCCGG TTATT CCGGGTG             TTTTTCCATCGGGGG 100 73
ND012_RS08040 1803304 .. 1803324 + -11.9  -3.14344   ATCCTGTGACCGGTC            TGGTGGCAA TTT TTGCCGCCA            TTGCTGCCAAACCTG  79 288
ND012_RS08050 1807990 .. 1808007 + -12.7  -5.24129   AGGTTATCTCTGATT             GCGCACC TTTA GGTGCGC              TTTTTTATCGCCAAC 100 92
ND012_RS08065 1809774 .. 1809786 +    -2  -4.19238   GCATTCTTGCGCGTA                TTCA CACCA TGAA                TTTTCGACTTGAGCG  57 379
ND012_RS08075 1813464 .. 1813490 +   -13  -4.28548   GCTGTCAGAGTGATC         ATCAGGGTGTGC TAT GCGCACCCTGAA         TTTTAGTCAATCGGT 100 51
        hslJ 1814623 .. 1814637 +  -5.6  -3.16742   ATCTGAGCCATTCCA               TCCGCG TCG CGCGAA               TTAATCAAGATTGGG  55 441
        nifJ 1819851 .. 1819888 + -12.3  -4.77036   TGATGTGCTGAAATC   GATAAAGTGATCAGTCA GTGA TTATTGATCACTTTATC    TTTTTGGTACTAAAA 100 88
        mpaA 1825362 .. 1825381 +  -2.8  -3.62597   TTCAGTAAGGTTTCA            TCTTTACC CGCG GGTAACGG             TTGTTCCAACATCGC  51 382
         tpx 1826666 .. 1826684 + -14.6  -3.83006   GTTGGTATAATGAAA             CGGCTGAC ATT GTCAGCCG             TTATTGATTGACTCT 100 48
ND012_RS08140 1829047 .. 1829059 +  -6.3  -4.00782   CATGGGGTCTTTTCG                TGACA GGA TGTCA                TTTGTGATGCTCTAC  67 23
ND012_RS08145 1829592 .. 1829602 +  -5.4  -3.97947   TGACGGCGAAAATCG                 CCAA GTT TTGG                 TTTATCATCACTCAG  64 96
        pspF 1835233 .. 1835245 +  -4.9  -3.23018   CATTAATAACGTGAG                TATCA AAC TGATA                ATTTTCATGTATGCC  50 431
        sapA NONE
        sapB NONE
        sapC 1840283 .. 1840297 +  -4.2  -3.12327   GCGATTATTGAGGGA               GTGGAA TAA TGCCAC               TATTAGATATCCGCA  49 17
        sapD NONE
        sapF 1842142 .. 1842164 +  -9.1  -4.15044   AGCACCATATTCTGT           CCGGGCG TGCTAGAAT CGCCCGG           TTTATTAACGCAAAA  83 69
        fabI 1843127 .. 1843149 +   -12  -4.17701   CAAAGATTATTCGAA           TCCGCTGTGG TCA TCGCAGCGGA           TTTATCATTTCTCAC 100 95
        dtpA 1845614 .. 1845644 + -12.7  -4.19238   GTTTATCGTTAATCA       CCAAAGGCACC AACCTGACC GGTGCCTTTGG       TTTTACGATTAAACG 100 53
ND012_RS08240 1848289 .. 1848305 + -13.7  -2.70932   GTAGCGCGGTTTAAC              CCGTCCG TAA CGGACGG              TCATTGACGGGCAAG  93 201
ND012_RS08245 1848945 .. 1848983 + -14.6  -3.22943   TAAAACCCTTACCTC   AACACCGTTCTCCGTAGA TAT TCTACGGGGCGCGGTGTA   TCTCTATTTCATCTT 100 49
ND012_RS08250 1849777 .. 1849790 +  -3.8  -3.93369   ATTCAACCATTATTT               GGCT ATTAGC AGCC                TTTGATTGAGATTAA  58 90
        yjbD 1850201 .. 1850218 + -12.7  -2.67055   CGCATTTATCAGGCA             GCGGAGG ATAT CCTCCGC              TACTATACCTATTAT  88 74
        gstA 1851081 .. 1851096 +  -3.2  -3.21218   CGATCTTGTCCTGCG              CAGCAA CCAC TTGCAG               TTCATACTCGCCCAT  46 139
ND012_RS08285 1856291 .. 1856333 + -13.6   -4.3586   ATTTAAGTTGCGGAC GTAAAAAAACCGAGGCTC ACACGAC GAGCCTCGGTTTGTTTTC TTTTGCTGTGAATAG 100 40
        eptA 1861214 .. 1861225 +  -5.8  -3.12749   TTTGCTCTTGACCTA                GACC GATC GGTC                 TATTACGCTTCTTGG  55 125
ND012_RS08315 1861896 .. 1861910 +  -4.3  -3.14881   GGTTTATACAAACAC               TAGAC GACTG GTCTA               TTAATACAGGAATTA  49 77
ND012_RS08320 1863072 .. 1863096 + -10.7  -5.69068   GATGCTTTGCATCAG          GCCGGTTAGCC ATT GCCTAATCGGC          TTTTTTATATTTTTC 100 69
        gloA NONE
         rnt 1864521 .. 1864550 + -12.3  -3.48276   TAGATTGCCCGTGAT       AAAAATAGGTGGC CGGA GCCACCTATTTTA        TTGTATCCACACCAA 100 91
ND012_RS08340 1866337 .. 1866357 +  -2.5  -3.54256   GCTTCTCGCTAATCA            CTTAAACTC TGC GTGGTTAAG            TCTGTTTTTCCGCGT  48 119
        sodB 1867091 .. 1867111 + -11.1  -3.45768   AATCACCAAGATAAA            GGGCGGATA GAT TCTCCGCCC            TTCTCACTTATCGTC  83 47
        purR 1868890 .. 1868907 +  -6.2  -3.44325   TCCGGTTTGCCAATC             CGGTGC CACTAA GCGCCG              TTGGTTATCCAGCGT  59 323
        punC 1871190 .. 1871212 + -13.5  -3.00816   CTTATGGATGAGTCC           CCTTGGTGC CAAGC GCACCAAGG           CTTATTCTTAATCTT 100 190
         cfa 1872512 .. 1872553 +   -11   -4.3014   CCGGTCGAGCCGCAA TAGTTAAAGGGATGCCAT TCATTC ATGGCATCCCTGTTGCTA  TTTTGCTCGCTATCT 100 41
ND012_RS08380 1875118 .. 1875148 + -10.3  -3.28001   TGGTTGAGCAGAAAA       GGCCGCCGGCGTA ACAGC TGCACCGACGGCC       TTAAATTTGCCACTC  78 67
ND012_RS08385 NONE
ND012_RS08390 NONE
ND012_RS08395 1875849 .. 1875863 +  -4.2   -3.6151   TACCGCCGCAGTTTG               CGCG ACATTTA CGCG               ATTTTTATCATTTCG  54 277
        pykF 1877634 .. 1877652 +  -8.8  -5.49568   CTGATAATATTAGAA             CGCCGC TATTACT GCGGCG             TTTTTCTTTTAACTT 100 61
ND012_RS08405 1878173 .. 1878191 + -14.6  -5.75342   TACTTCAATGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCCCGA 100 44
        ydiK NONE
        rprA 1891586 .. 1891605 +  -7.8  -3.55622   AAGGATAATAAAAAA            TCCGCAAC CTGC GCTGCGGA             TTTCAGAACATTCCC  68 115
ND012_RS08470 1895105 .. 1895118 +  -3.1  -2.64695   GCCGAATGTTTTAAA               GGTGT ATTC ACATC                ATTGATTGATACTCA  42 27
ND012_RS08475 1896386 .. 1896416 + -16.3  -2.77899   TATCTGTTTTCTTTC      GCC-TTCAGGTGCC AAAC GGCACCTGAAGGGC       TCCTTGCTCACAGAG 100 106
ND012_RS08480 1896888 .. 1896903 +  -3.3  -4.07568   TTAACCAAATAATCC              GTATC CCTTCA GATAC               TTTTAGCAAGCCACC  56 29
ND012_RS08485 1899103 .. 1899114 +  -5.8  -4.65895   GAGTTTAGCTGCAAC                TGGC TCAT GCCA                 TTTTTCCGTAGGAGA  75 79
ND012_RS08490 NONE
ND012_RS08495 NONE
ND012_RS08500 NONE
ND012_RS08505 1902836 .. 1902869 +  -8.9  -5.01732   CCCGTCGAATCCGAC     CCACGCGACATGA TCTTGACC TCATGCTGCGTGG      TTTTTTCCAGCGCTT 100 46
ND012_RS08575 NONE
ND012_RS08580 1917747 .. 1917761 +  -6.4  -2.86728   ATTGATATCGCCAAA               GGAACG ACC CGTTTC               TGTCATATCAATCGT  55 277
ND012_RS08590 1919314 .. 1919354 + -13.2  -2.53263   CGGGCAGCACGTCGC GCCGCTGCCGCGCGGTGGT CCAA ACTGCAACGCGGC-GCGGC  TGAATTCACCATGAC  90 487
ND012_RS08600 1919893 .. 1919909 +  -7.2  -5.26918   CCCCGCTTTCAATCA              GCCTGC CGCGT GCGGGC              TTTTTTGTCGGCTCT  91 47
ND012_RS08645 1929122 .. 1929133 +  -2.2  -4.14392   ATTCTGTGAGTGGTG                CTTG AACG CAGG                 TTTTGGCAGTTAACC  55 367
ND012_RS08650 1929585 .. 1929605 +  -6.9  -4.47284   TTAACTCAATTTGAC            CCAATGG CATTCCC CCATTGG            TTATTTATTTGTTTC  76 72
ND012_RS08660 1930843 .. 1930870 + -13.4  -4.62475   TGGTTACTGGAACGC        CGCCTCGACTGT TTAT GCAGCCGAGGCG         TTTTCATTTATAAAT 100 195
ND012_RS08670 1932926 .. 1932936 +  -5.4  -2.53911   CGATGAAATACTGCC                 TGCA AGA TGCA                 TCGGTTAGCGATTCA  49 138
ND012_RS08680 NONE
        yfeB NONE
        yfeC NONE
ND012_RS08695 1937467 .. 1937491 + -11.5  -4.62783   TATACACGTCTTTAT          CGTGTGCTG CGCAATA CAGCACACG          TTTTTCACCTCAATA 100 47
ND012_RS08700 1938529 .. 1938555 +  -5.1   -4.0174   TGCCAAAATGAAAAA         GCCTGCCTC AAATCAACA GAGACAGGC         TTTATACGTTATGTT  63 55
        hxpB 1940370 .. 1940382 +  -3.3  -3.50853   CATCCGTTCATCACT                CCAGA TCA TCAGG                TTATCCTTGAACCCA  49 278
ND012_RS08715 1941164 .. 1941178 +  -4.3  -3.54029   ACTAAATTGCCCAAA               TCATC ACCCA GATGA               TTATACTTCATACGA  52 45
ND012_RS08720 1943195 .. 1943207 +  -4.8  -3.69068   CTGAATGGACTCAAC                CGAC GCCAG GTCG                TGTTTATTACGCTCG  57 479
ND012_RS08735 1946828 .. 1946857 + -13.5   -3.7331   ACACTCGAAAGCAAT       CTGAGACCCCGCG TAAA TGCGGGGCCTCGG        TGTTTTCGTCAAAGT 100 253
        yebS NONE
ND012_RS08770 1955630 .. 1955667 + -11.3   -2.9186   TTCCGCGTTTTTAAA   CCCTCTACCGGGTGGC AATCTGA GCCGCCCGGT-GAGGC   TCTCTACCATTGGCT  83 27
ND012_RS08775 1958267 .. 1958283 +  -7.9  -4.85599   ACATACCGATTTAAT              GCGCCAG CCT CTGGCAC              TTTTTATCAGCTCGA  91 41
ND012_RS08780 1958649 .. 1958659 +  -3.2  -4.48877   GTAACTTCGCGCTAA                 CCTA CGG TGGG                 TTTTCTCACTCTTTG  63 70
ND012_RS08790 1959368 .. 1959381 +  -2.4  -3.27774   ATATTACGCTGGGCA               GCAA TGGTAT TTGC                TTAATGCTTACGGTC  45 8
ND012_RS08820 1963737 .. 1963772 + -13.4  -3.67558   ATTAAAAATACATGA    CCGATAAATACCGGTG TTTA CTCCGGTATTTATCGA     TTATTCACATGTCTA 100 517
ND012_RS08830 1966066 .. 1966091 +  -7.7  -4.57569   CCTGGTTTAAGAAAA         CCAATCTGT AGTCAATG ACAGATTGG          TTTTTCGAAAACTGA  82 86
ND012_RS08835 1967020 .. 1967031 +  -5.8  -2.63723   ATTAGCTTATCCCAA                CGGT TATC ACCG                 CTTACTTGCTGGCAG  52 147
      blaYRC 1968792 .. 1968809 + -10.5  -4.15565   TACAGTAAATAGCAT             GGCTCGC TTCA GCGGGCC              TTTTCAAATGCTGGG  91 33
ND012_RS08845 1969881 .. 1969891 +  -3.2  -5.26247   GCAAAAGGCTCATTT                 TCTG ACC CGGA                 TTTTCTTTATTTTCA  79 396
ND012_RS08870 1973087 .. 1973106 +  -4.4  -4.40561   GAACCTAAGGTAAAA            TAAAGCAGA AAT TC-GCTTTA            TTATTTTTCACGGCC  63 23
        exoX 1975836 .. 1975862 +  -6.6  -3.35644   TTCATTTCACGCAGT         TTGGCAACCC ATTTAGC GGGTTCCCAA         TATTGTACTTGTGAG  59 170
        purT 1982250 .. 1982273 +  -8.1  -3.39595   GGAAAGAAAATGGAA          GGCTTCGGC AAAGGC GCCGAAACC           TTCTGGATCGTTAGC  66 68
        pabB NONE
ND012_RS08925 1984771 .. 1984781 +  -3.2  -4.57073   TCTACTCTATGCTCA                 CTGT GTC GCAG                 TTTTTAAAAAAACTG  63 116
        sdaA 1986528 .. 1986546 +   -16  -3.37464   AGATGAACGAAAGAA             CGGGAGCC ATT GGCTCCCG             TTCTCAGATTGATGA 100 70
        manX 1989900 .. 1989920 +  -3.2  -4.25658   ACAGAAAGGTTTATG            TCCGGTTC TGTTT GAACGGGG            TTATTTTACTCAGCT  61 61
ND012_RS08945 NONE
ND012_RS08950 1991656 .. 1991679 + -12.4   -5.0133   TCTGATGTCAGTATC          AAACCGGGGG TTCG CCCCCGGTTG           TTTTTTCCAGGAGTA 100 54
ND012_RS08955 1992429 .. 1992440 +    -3  -3.03624   AATTCAGAAACGCCC                GTAT CAAC ATAC                 TCGTTTCATTCATCG  44 293
        mntP 1993274 .. 1993291 +  -4.9  -3.53224   CTGGCTGACGGAAGC             GAAGGATG ACT CA-CCTTC             TTTCCGAGCGCCGTA  55 161
ND012_RS09000 2004327 .. 2004355 + -13.1   -4.1552   ACCCTGTTAATACTT        AGGCCATGGCCTG CCT CAGGCCATGGCGA        TTTATTACAGCACTG 100 31
ND012_RS09010 2005773 .. 2005785 +  -4.9  -3.49938   AGAGTTCAAGCCATA                TATCA GTC TGATA                TTGTCGGTTATTTAG  55 107
ND012_RS09015 2006495 .. 2006505 +  -2.4   -4.0942   CCAGTTCACCATCAC                 CACG TCA CGGG                 TTTCTCTGATAGCTC  55 327
        pgeF 2010130 .. 2010145 +  -7.5  -5.78622   ACACAGACGAAAAAA              CCCGC ACGTAG GCGGG               TTTTTTTTCAGCTAG 100 51
        pagP 2012126 .. 2012141 +  -6.2  -3.02144   ATGCGATGGAGGTTC              TAACCA TTAT TGGTTA               TATTCGGGGGAGTCA  56 23
ND012_RS09075 2015990 .. 2016011 +  -8.7  -4.68645   AGTCCGATTATAAAA           CCCGCAC CACACACC GTGCGGG            TTTTAATTTTAACTC 100 39
ND012_RS09085 NONE
ND012_RS09105 NONE
ND012_RS09110 2022571 .. 2022611 +  -6.3  -4.56314   CAGAATCCCGATTAA GTGTATGGGTAGAGCA TTTATCTCCC TGCTCTACCC-TACTC  TTTTGCTTCTCTTCA  74 26
        hdeB 2026753 .. 2026795 + -11.5  -2.62396   TGTAAGACGAAATAA GAAACTTCATGATGGCGAT ATATA ATGGCGATCATGGAGTTTC TAGTATCACGCCATC  80 36
ND012_RS09145 NONE
ND012_RS09150 2030499 .. 2030511 +  -6.9  -5.80951   CTCAAAATAAAAAAA                CCGCT CAA GGCGG                TTTTTTATTTTGACT 100 93
ND012_RS09165 2033470 .. 2033481 +  -7.2  -2.61274   GATCCGGAAGGATAC                CCCG GAGC CGGG                 CTTCATTGCGGTCAA  56 477
ND012_RS09210 2041591 .. 2041627 +  -3.2  -4.67608   ACCTGTTGCAGATAT   TTATGTATGAAAAGTCC TTCA GGGCTTTTCAT-TAAAA    TTTTATGTTCAACTG  65 44
ND012_RS09215 2043479 .. 2043515 +  -4.5  -3.83155   CACGCCTACCATCGC   CGGGCTGATAAACTCG ACCACA TGGG-TTATCAGCCGG    TTCTTAATATTAATA  59 161
ND012_RS09225 NONE
        arcA 2047677 .. 2047699 + -13.5  -5.35224   CTAGGTTGAGCCAAA           GCCGGATAG CCTGT CTATCCGGC           TTTTCTTTTTGTCCA 100 61
ND012_RS09245 2052382 .. 2052431 +  -3.6  -3.01261   TTTTATACATAATTG CCCTGAAATATCTGCGTTGCAGCC ATAT GGCTGTGGCGCGGATAA--CAGGC TATATATCACATTGT  46 57
ND012_RS09250 2054088 .. 2054103 + -10.4  -3.10012   CTATTCTACTGACAA              GGGAGC CATC GCTCCC               TTGGCTCGTAACATT  77 45
        glsA NONE
ND012_RS09260 2055993 .. 2056018 +   -12  -3.01924   TTAATTGTTATAGTT         CATCCCCTAT AACTCC ATAGGGGATG          TCTTGCACGGAAATA  86 42
ND012_RS09290 NONE
ND012_RS09295 2063277 .. 2063289 +  -9.1  -3.86015   GGCTGGTGATACAGC                GGCAC TGG GTGCC                TTTATCCGGGAGCTG  78 98
ND012_RS09300 2064824 .. 2064846 +  -9.9  -2.71712   AATATTTAAACACCC          GCCGGTTCTG TCAC CAGA-CCGGC           ATTTAACCCACCGAG  71 63
ND012_RS09305 NONE
ND012_RS09310 2067660 .. 2067673 +  -3.1  -4.59109   CAATTTAGTTTTTAA               CACTT CATA AGGTG                TTTTTCCACCATGTA  65 177
        ltrA 2070522 .. 2070545 + -13.2  -3.30124   TCCGTTCTTAGGAGA          GCACAGTCAG GTAA CTGGCTGTGC           TTATCCGACCTACAG 100 107
ND012_RS09335 2078252 .. 2078268 +  -3.7  -3.34233   ATCATTAGGCGCATC              TACCGAT AAT ATCGATA              TTATGGCGATTATCC  48 360
        ltrA 2084910 .. 2084933 + -13.2  -3.31322   TCCGTTCTTAGGAGA          GCACAGTCAG GTAA CTGGCTGTGC           TTATCCGACATTACA 100 107
ND012_RS09365 2086676 .. 2086701 +  -4.7  -3.45707   GGTGGCTAAGAAGGA         CAATCTGCTAT GTAA ATGGCTGGTTG          ATTTTTAGCTATTTA  55 521
ND012_RS09370 NONE
ND012_RS09375 2088415 .. 2088438 +  -5.4   -3.4072   CTGAGTACATCCTTG          TTTCCGTT ATTCCTCA AACGGAAA           TTGTCCTGACACATA  57 88
ND012_RS09395 2092389 .. 2092400 +  -7.2  -4.15366   TAGCCATTTTTAAAG                GGGG ATTG CCCC                 TTTGCTTCTTTAGGT  73 75
ND012_RS09405 NONE
ND012_RS09415 2095571 .. 2095583 +  -7.7  -3.92592   GTGATATCCGGGTGA                GCAGT TCC ACTGC                TTTGGTGTTGCCACT  74 407
ND012_RS09425 2097213 .. 2097225 +  -7.7  -3.02144   GAGTACAGATAAAGC                GCTGA TGA TCAGC                TATTACGAGAGATGC  62 150
ND012_RS09430 2098864 .. 2098880 +  -2.2  -2.80479   TAATTTACAAACAAC              CGCTTA TCTTC TTAGCG              TACGTTTTCGTTCCA  41 414
        ltrA 2101055 .. 2101078 + -13.2  -3.29144   TCCGTTCTTAGGAGA          GCACAGTCAG GTAA CTGGCTGTGC           TTATCCGACAAATAC 100 107
ND012_RS09440 2103211 .. 2103233 +  -4.1  -3.39803   TACGGTAAAAACTCG           CTCCCGT AGTGCGTGA ACGGGGG           TTATCCCTCTAACTG  51 309
ND012_RS09445 2103968 .. 2103990 + -10.6  -3.12663   ATCCAGCCTCGTTTT           GCTGGGAC AGAAAAA GTCCCAGC           CTTTTACCTGATGAT  77 238
ND012_RS09465 NONE
ND012_RS09470 2108118 .. 2108139 +  -3.7  -3.53012   GCCGTAATGCATGGT           TTTATCGCG GGTT CGTGATCAA            TTTCCGGCGCAGAAC  51 74
ND012_RS09475 NONE
ND012_RS09480 2108717 .. 2108729 +  -4.7  -2.98088   AGAAAGAAGAAGTAG                CACGC AAA GCGCG                TCTGTAAGTTTAAAC  50 6
ND012_RS09485 NONE
ND012_RS09490 NONE
ND012_RS09495 NONE
ND012_RS09500 NONE
ND012_RS09505 NONE
ND012_RS09510 NONE
ND012_RS09515 2113259 .. 2113292 + -12.7   -2.7186   GTATTGAAAATATTA     TTATTCCTGAACATT ATAA AATGTGCAGGAATAA      TAATTAAAAGAGTTT  88 34
ND012_RS09530 2116481 .. 2116515 + -12.4  -3.19965   GAAAAAATAAGAATC     TTAATTGCCTACAATA TAC TTTTGTAGGCAATTAG     TATTACTCATATATT  93 31
ND012_RS09580 2122979 .. 2123002 + -11.8  -3.06037   GGCTAGGTATCTTCG          CAGGCCCGAGA GTA TCT-GGGCCTG          TCTATAATTTAGGGT  86 40
        cycA 2126952 .. 2126982 +  -8.3  -5.77677   AGCCGTTAATAAAAA      GCGTGGCGTCAGGA TTAT TCCA-ACGTCACGC       TTTTTTATTATTTTA 100 46
        putA 2138880 .. 2138919 +  -7.9  -3.77413   CGTGAATACGTCCTT GTCGGCTCGTTCCGCGCTA TCCT TGGCGCGG-ACGC-TCGAC  TCTTTTGCTGGTCTT  72 146
        fliD NONE
        fliS NONE
        fliT 2151080 .. 2151091 +  -4.4  -4.14422   CGCCCTACTTGTCCT                GCTT CTGA AAGC                 TATTTTTGTGTGTCA  61 147
ND012_RS09690 2152186 .. 2152197 +  -5.8  -3.50302   TCAGCAGTTTTCTTC                GCGA TTAA TCGC                 TGTATTTTATAATAA  59 110
ND012_RS09695 2155214 .. 2155265 +  -6.1  -2.89028   CGCAGCCATCTTAAA CAAGCACAATAACCGAGGATAGAC GATAA GT-TATTCTCAGTTATTGTGCTGA TGATTAATTGGTTTT  55 48
ND012_RS09710 2158153 .. 2158174 + -12.9  -3.75292   TATTTTTGAGGACTT           GCCCCGCGG AATA CCCCGGGGC            TTGTTCGTCATGACT 100 89
        fliF NONE
        fliG NONE
        fliH NONE
        fliI 2163591 .. 2163615 +  -8.6  -4.53636   CTGCTTCCCGGCTAA         TCGGACGTCAG CATG CTGACG-CCGG          TTTTCATTCTGTAAT  87 26
        fliJ 2164066 .. 2164079 +  -3.8  -2.64199   AGTTTGCTCAACGCA               GCTC ACAAAG GAGC                CTTAATTCATGAATC  44 0
ND012_RS09745 2165453 .. 2165464 +  -2.2  -4.57837   AATTGAACAAACGGG                CGAGC TAG GC-CG                TTTTTCCCCACCTAT  60 41
        fliL 2166080 .. 2166102 +  -3.4  -2.82623   TCAGCGACGTGCTGT           TTACCGCATT CAT ACTGCGATAA           TCATTATGGGCGACA  43 3
        fliM NONE
        fliN 2167507 .. 2167517 +  -2.4  -3.14132   TCTGAACGTATGCGT                 CGTC TGA GCCG                 TTAATGAGCGAAGCG  43 11
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR 2170331 .. 2170345 +  -3.4  -4.26079   TCACCGCATCTGATG               CTCCGG CCA TCGGCG               TTTTCAGTGATTTCA  60 514
        flgA 2181234 .. 2181249 +  -2.6  -3.47227   CGTGGGTGACGATGG              CGTAAT TCGC ATTATG               TTATAGTCGTTAAAG  48 4
        flgM NONE
        flgN NONE
ND012_RS09870 2188115 .. 2188167 + -11.6  -4.34402   CAATTATCAGAGAAG GTAAAGGCCAGTTTTGCAGATGAGGG TAG CCCTCATCTGCATAG-TG-CATTTAC TTTTGGTCTAAAAAC 100 70
        uspC 2202472 .. 2202502 +    -7  -2.77523   CCGTTATCTCCTCCG       TTAAAAATCGGG TGATTGC CCCGATCTTTAA       TAATATTGCTGAAAA  57 264
ND012_RS09945 2206501 .. 2206530 + -12.1  -5.71712   GATAAAAGCAAAAAA       CCGGAGCAAGGTA ACCA TCCCCTGCTCCGG        TTTTTTTATATGCAG 100 239
ND012_RS09960 2208966 .. 2208979 +  -3.8  -4.61916   CCAAAAAAAATAAAT               GCGA TCACTC TCGC                TTATTTATTTTTTGT  67 136
ND012_RS09965 2212399 .. 2212416 +  -7.7  -6.14618   TATTGTATTTTTACA             CACCCAT CCTC GTGGGTG              TTTTTTTGTTTTATG 100 156
ND012_RS09970 2213778 .. 2213788 +    -4  -2.78216   CATTCAACTATAACA                 GTTA ACC TAAC                 TAATTCATCAAACTG  46 181
ND012_RS09975 2214531 .. 2214542 +  -2.2  -3.74397   TTATTGATGAGTAAT                CTCT TTTC AGGG                 CTTTTTTGTAACAAT  51 160
ND012_RS09980 2215702 .. 2215719 +  -9.1  -4.99035   TGCAGCACCATCACA             GCTCCCA TTAC TGGGGGC              TTTTTATATCACTGC 100 100
        ydfZ 2216260 .. 2216276 +  -9.4  -3.17956   AGGTAAATACCTTAA              GGCCAC CTAGC GTGGCC              TTAATAGCGTGGTTT  72 79
        mtfA 2217391 .. 2217402 +  -3.6  -3.11289   AGATGCTGAGCAAAC                GCGC TTTT GTGC                 TGATTTTAGCGTTGA  48 127
ND012_RS10000 2217548 .. 2217571 + -11.8  -5.25893   GCCAAATTAGAGAAA          CCCGATTAAG GAAA CTTAGTCGGG           TTTTTTGCTATCTGT 100 37
ND012_RS10005 2218333 .. 2218344 +  -5.8  -3.27298   AATCTCGCTTAGGGC                CCGT ATCC ACGG                 TTCGTGGTTAGGAGC  57 333
        dpiB NONE
        dpiA 2228824 .. 2228838 +  -4.3  -3.15861   TTCCATCAACAATTA               TTGCT CTATC AGCAA               TTGATCCGCATCATA  49 136
ND012_RS10065 NONE
ND012_RS10070 NONE
        uhpC 2232547 .. 2232558 +    -3  -3.60098   TAAATAAAACAGTAA                GTTA ATCA TAAC                 TTTACCCTACAACAT  51 97
ND012_RS10080 NONE
ND012_RS10085 NONE
        fbpC 2236952 .. 2236976 + -14.4  -3.32343   AATCTCTCCGCTGCC          GGCTGGTCAT CGCTA ATGACCAGCC          TTATCAAGCTATGAA 100 39
ND012_RS10095 2237999 .. 2238009 +  -4.6   -2.7555   TTCCCAAACGCAGAC                 CGGG GTT CTCG                 TGGTATTCACCTATC  49 81
ND012_RS10100 2238276 .. 2238299 + -11.8  -5.25893   GCCAAATTAGAAAAA          CCCGATTAAG GAAA CTTAGTCGGG           TTTTTTGCTATCTGT 100 37
        sbcB 2243594 .. 2243611 + -11.3   -4.7254   TCTCGCATAAAAAAA             CGGAGCT AATC AGCTCCG              TTTTTCATCACAAAT 100 48
ND012_RS10170 2255511 .. 2255535 +   -10  -4.88407   AACCGACGTAATCTG          CCCTCTGCTG CCCAT CGGTAGAGGG          TTTTTCGTTCCCTCA 100 49
         nfo 2256555 .. 2256572 + -11.3  -5.81412   CACGGGATAAAAAAA             CCGGAGT CTGC ACTCCGG              TTTTTTTTGGCTCAA 100 109
ND012_RS10195 NONE
ND012_RS10200 NONE
        torA 2264970 .. 2264988 + -11.8  -5.28176   TCACTGATAAATCAA             GGCGATAT CTA ATATCGCC             TTTTTTATGCCTGAA 100 54
         mtr 2266824 .. 2266857 +  -8.8  -4.30995   TAAGTTCCTACACTT     CCTGCCATCGAGTC ATTTCC GTCTCGGTGGTGGG      TTCTTTTCTGGCAGA  86 38
        yeiP 2267612 .. 2267630 + -10.2  -3.12668   TGATTCAAACGTTAA             GAGCCGGT AAA ACCGGCCC             TTAACTGTCAACCTA  77 48
ND012_RS10230 2270731 .. 2270760 + -12.9   -2.6078   TCATAGTATGCTTCA       CCACTGGTCTGAA CCCT TGCAGGCCAGTGG        TCACTTCCTCTTCGT  91 35
ND012_RS10240 NONE
ND012_RS10245 2273659 .. 2273674 +  -5.4  -4.21319   TAATCCAATAAAAAT              TGTGCG TTCC TGCACA               TTTATTCGGATTAGT  65 292
        mepS 2274418 .. 2274435 +  -8.4  -5.80727   CGAAGAGATCAAAGA             CGCTGC CACATT GCAGCG              TTTTTTGTTGTTTTT 100 74
ND012_RS10255 NONE
ND012_RS10260 NONE
ND012_RS10265 NONE
ND012_RS10270 NONE
        yejF 2282163 .. 2282177 +  -2.8  -3.05844   CATTCAACAATGGCC               GAATCA ACC TGAATC               TCTTGCAGTGAAAGG  43 172
ND012_RS10295 2287256 .. 2287283 +  -6.2  -2.88887   TAAACTGACTAACGA        ACCTGTTACTGG GTCG CCTGTAGCAGGG         TAAATTTTCTTTCGA  55 135
        rplY 2287656 .. 2287681 + -11.9  -5.61913   TGATGCGATGAAAAA         TGCCAGCCAGT TCAT ACTGTCTGGCA          TTTTTTGTGTTTATT 100 87
ND012_RS10310 NONE
        yejM NONE
ND012_RS10320 2291267 .. 2291284 +    -7  -5.64274   ATAATCTCTTAAAAA             CCAACC CATTGC GGTTGG              TTTTTTTATGGGTGG 100 42
ND012_RS10325 NONE
ND012_RS10335 2293485 .. 2293499 +  -5.6  -4.51174   CTTCGCAACTGCGTA               CGCTGA GTC TCTGCG               TTTTCCTTCTGCTGC  73 244
ND012_RS10505 2318542 .. 2318571 + -10.7  -3.41581   GCATACCTTAAAAAT       GCAAAAGGCTCAC CGAA GTGAGCCTTAAGC        TTGATTACTGAATTA  83 142
ND012_RS10560 2325730 .. 2325741 +  -7.2  -5.96219   CTAATCAATTAGAAC                CGGC CTTC GCCG                 TTTTTTTTATGCCTA 100 47
ND012_RS10565 2327065 .. 2327082 +  -4.3  -3.65827   GCAAATTAAAAACTG             TTAATTA AACG TAATTAA              TTTAAATCCACATTC  54 18
ND012_RS10570 2327985 .. 2328002 +  -6.3  -3.76379   TAGTACAACCTCAAA             TATCCCA GCGA TGGGGTA              TTTGGTGGAGTATTA  65 52
ND012_RS10575 NONE
ND012_RS10580 NONE
ND012_RS10585 2329340 .. 2329358 +  -6.6   -3.4072   ATAAAATTGTTCTAC             GGCCCGTT TGC GGTGGGCC             TTCTAATAAACAGTG  63 37
ND012_RS10590 2329581 .. 2329591 +    -4  -3.14931   AATCTCATCACTTGT                 TCAT CAA ATGA                 TTACTGAGGCGTAAA  49 1
ND012_RS10595 2330783 .. 2330811 +  -3.1  -2.84059   ACGGGGAAATTGCAG        TTTGAGGAATGGT AAA ACCATACCCTAAG        TCGTTGATGTGTATA  43 21
ND012_RS10600 2330983 .. 2331000 +    -7  -5.64274   ATAATCTCTTAAAAA             CCAACC CATTGC GGTTGG              TTTTTTTATGGGTGG 100 40
ND012_RS10605 2331708 .. 2331724 +  -5.1  -2.76492   CCACAGGATGATCTC              GGGAGCA AAA TGTTTCC              ATTTGAAATCGCTAG  50 264
ND012_RS10615 2332409 .. 2332437 +  -5.9  -2.74012   GCCAGCGCTAACTGT        TCCGGCGGTTCAT CTA ATGATTCGTCGGC        TAATTCAAATACTCC  51 226
        ampH 2334876 .. 2334894 +  -6.7  -4.82901   TCCTGGCGACCGAAA             GGACGTC TTGGC GATGTCC             TTTTTGTCAGCACCA  82 41
ND012_RS10650 2339405 .. 2339418 +  -3.1   -2.8805   TAACGCGTTAATTAA               GGAAC CAGC GTTTC                TCTATGCAAAATAAT  43 30
        rcsD NONE
        rcsB 2342822 .. 2342849 + -12.1  -4.21812   AGCTGTACCATTCAA        TAAACCCGGCG AATCAC TGCCGGGTTTA         TTATTTTCAGTGCCA 100 50
        ubiG 2349724 .. 2349734 +  -2.6  -4.36914   TCAAATTTTTAAGAT                 TTTT AGT AAAA                 TTTTATCCCCCAGAC  59 228
        nrdA 2352321 .. 2352355 + -11.5  -3.37533   AGTTAAGGCCCTCTC    CCGCCGGGCAATC-CA TGCA TGCGATTGACTGGCGG     TTGATCATTTTGCAC  86 46
        nrdB NONE
        yfaE NONE
         eco 2355688 .. 2355710 +    -4  -4.07568   AACAAGAATGTATTG           CCTGCATCTT GCC GAGCTGCCGG           TTTTCACCACAGCAA  59 149
ND012_RS10710 NONE
ND012_RS10715 NONE
ND012_RS10720 2360420 .. 2360456 + -11.7  -3.46212   GCCCCTTTGATAACG   TCCTCAATCGCGCCAC CCCTGA GTGGCGCGAT-GAGCA    TTCCTTCTACCTGCT  89 126
        tyrP 2361920 .. 2361943 +  -6.7  -2.69471   GGGCCAGTTTATGCT          GCGCACC CATTTTATCA GGTGCGC           CTTATATCCCCGTCC  56 86
ND012_RS10735 2364346 .. 2364374 + -11.7  -3.75629   GGGTTATTTTAGTCA        TCAGCTCGGTTGC TAA GCATCCGAGTTGG        TTTCGGTTGAGACTG  95 40
ND012_RS10850 2392262 .. 2392279 + -10.5  -2.70932   CAATACTTGATTGTT             GGGGGGC GCAA GCCTCCC              TAATTCGCCGAGAGC  74 52
        yfbR 2393332 .. 2393342 +  -2.4  -3.04144   GGGCGCCATCAATAC                 CGCC GTT GCCG                 TATTGGAAATAAACA  42 391
ND012_RS10865 2396132 .. 2396150 + -11.7  -3.55548   TTTTCGCTTGATATT             CCCTCGC ACTGG GCGAGGG             TTTACCGCGCTGTTG  89 116
        ackA 2398898 .. 2398927 + -15.1  -4.07568   CTGCATAAGTCTCCT       CAATACCGTCAGC TAAA GCTGGCGGTGTTG        TTTTCACCCGACAGC 100 33
         pta 2401160 .. 2401179 + -10.7  -5.39721   GGTTTGTTGTAAAAA            CGCCAGC TTTCGC GCTGGCG             TTTTTTATCTGGTCG 100 51
ND012_RS10895 NONE
ND012_RS10900 NONE
ND012_RS10905 2404615 .. 2404636 +  -7.2  -5.05228   ACCATCAATAAAAAA           GGCGCCGA GAATTA TCGGGGCC            TTTTTATCATTTACT  89 58
ND012_RS10925 2407781 .. 2407798 +    -7  -4.13014   CAGCTAACGGATCTA             TACCCC ATTCTC GGGGTA              TTTTCCCCCTCTCAA  71 34
ND012_RS10930 2409071 .. 2409099 + -11.1  -2.92667   ACCGATTTACTTTAA        TGCGCCTGAAA GGAACTG TTTCAGGCGCG        TGCTTTGCGGATTAC  79 49
ND012_RS10955 2412378 .. 2412390 +  -2.7  -4.27211   CATTAAGCAGGATCA                TTGTG GTG CATAA                TTTGCTTTATTTCAG  59 13
ND012_RS11015 2424657 .. 2424677 +  -6.7  -4.57569   AGTGGTCACACTCTC            GGGCTGGGG AAG CCGCGGCTC            TTTTTGCCGGAGTAA  77 73
ND012_RS11025 2427676 .. 2427705 +  -9.9  -2.64155   TGACATTTTCCCCGT       CCGCGACCAGCGT GTTG ACGCTGGGCGTAG        TGAATTTGCACACCC  66 362
         flk 2432500 .. 2432510 +  -6.8  -2.75294   AACCGTCCGGTTCCA                 GGCT TTC AGCC                 GTTTACCCACTTTGC  54 211
        mnmC 2437532 .. 2437548 + -11.5  -3.21772   ATAAGGGAAGTGCTC              CGCCGCC AGC GGTGGCG              TATTGTAAAACGATT  79 425
        smrB 2442680 .. 2442712 + -15.8   -3.2327   ATTAACCGAATAAAT     TAAGGGCGTG-ACAG AAAA CTGTTCACGCCCTTA      TTGGTGATGCCTTGC 100 28
        fadL 2449567 .. 2449594 + -15.8  -4.14392   ACGAACGCCAACCAA        TAAAAAAGCGCC TTCC GGCGCTTTTTTA         TTTTCAACATTCCCG 100 110
ND012_RS11180 2458404 .. 2458421 +  -4.1  -5.12474   ATGCGATGAGCAACA             GATTGTG TCTC CACATTC              TTTTTATCTATTGTC  77 69
ND012_RS11200 2462334 .. 2462347 +  -3.1  -2.84125   ATAATTTATAACACC               GTGAT TCCT GTCAC                ATTTCAATCTATCGA  43 89
        ypdK 2462727 .. 2462742 + -11.8  -4.27846   TATTCCAGCATTAGA              GGGCGC AAAT GCGCCC               TTTGTCATTTTATTT 100 53
ND012_RS11220 NONE
ND012_RS11225 2468170 .. 2468184 +  -3.5  -3.35679   TAATTTAACTTCCCC               CGTTC AACCG GAGCG               TTATCCATGAAAGCC  49 38
ND012_RS11230 NONE
ND012_RS11235 2470396 .. 2470417 +    -8  -5.52023   CTGTGACATAAAAAA           CCACGTCG TTAATC TGACGTGG            TTTTTTATTGCTCAT 100 55
ND012_RS11250 NONE
ND012_RS11255 2473539 .. 2473574 + -10.4  -2.64354   TCACGACGATTAAAA    CTGG-CTCCGGCGGTGA GCT TCGCCGCCGGGCATCAG    ATTCTCGCTATATCA  74 28
ND012_RS11265 2476450 .. 2476463 +  -9.5  -5.36441   TGACTGTTGATAAAA               GGCGC TGCG GCGCC                TTTTTTATCTCAACG 100 52
        gltX 2479133 .. 2479149 +  -9.4  -5.19212   TAGCTTAATATCCGA              GCGGCT CCTGT AGCCGC              TTTTTTCATACTACT 100 51
ND012_RS11300 2479407 .. 2479426 +  -7.2  -2.60723   CTCCACCAAACTTCG            CTTGATTG AATG CAGTCAAG             GTTGATTGGCGGTAC  58 33
ND012_RS11305 2479566 .. 2479594 + -15.5  -2.83403   AGCTCCACCAACTTT        TAAAAAACCAGCC GAT GGCTGGTTTTTTG        CTTTCCTGCCCACGC 100 31
ND012_RS11310 NONE
ND012_RS11315 2481000 .. 2481017 + -12.7  -2.88536   CAGATCAGATGCACG             CCACCGC CGAA GCGGTGG              ATTTAGATTGATTCT  89 341
        cysZ 2485075 .. 2485093 + -13.1  -3.79906   ACGCTAGTCCAGCCA             GGGCGCG GCTTA CGCGCCC             TTCTTGTCAAGATGA 100 34
        cysK 2486217 .. 2486232 +  -6.1  -5.69473   CTAAATGCTAAAAAA              GCACC CTCTGT GGTGC               TTTTTTTGTGGTGTG 100 54
        ptsH NONE
        ptsI NONE
         crr 2489204 .. 2489219 + -10.4  -5.80003   TGCGGATAAGAAAAA              CGACGC TTCG GCGTCG               TTTTTTATTTATTAG 100 47
ND012_RS11405 NONE
ND012_RS11410 2500752 .. 2500784 + -10.6   -5.1101   ACGCTGAAAATAATA     AAGGCCGGGTATGCT GAAT AGCG-ACCCGGCCTG      TTTTTTGCATAATAA 100 60
ND012_RS11425 2503342 .. 2503374 +   -12  -2.98942   ACCATAATTCCTAAC      GCCCTATCTCTGCG TTCAT CACGGGGATAGGGC      TATGTCTGCCAGCCT  86 34
ND012_RS11450 2506665 .. 2506687 +  -6.3  -5.68438   GATTATTCAGCAAAT           CCAGCGT AGCAATCAG ACGCTGG           TTTTTTATTTCGTAA 100 52
ND012_RS11460 2507202 .. 2507212 +  -2.6  -4.16279   TAAACACTAAACTGA                 TATA CAT TATA                 TTTTGAAGTGATATA  57 38
ND012_RS11465 2507983 .. 2507996 +  -3.7  -5.26875   CATGAGCCTGGACTA               CCAGC CTTA GCAGG                TTTTTTAATTGAAAA  79 60
        hemF NONE
ND012_RS11505 2514129 .. 2514140 +  -4.4  -2.78384   CGGCTGACAAACCGC                GATC CTGC GATC                 TCTGGTGGGGAAGAC  46 132
ND012_RS11545 2523587 .. 2523626 +  -5.2  -3.56036   AAAATCAGTCTATCT  GATGGTGAAAAAGAGCGAC CTT GT-GTTTTTTTACACTATC  TCCTTTTTTTCTCCA  57 367
        acrD 2526905 .. 2526942 +   -10  -4.57353   TATTTGAATACAAAA  C-ACGCCGTTAAACC-GC TCTG GCAGGTTTAACGGCGGCG   TTTTATATCGTGAAA 100 46
ND012_RS11560 2528051 .. 2528063 +  -4.1   -3.1541   ATTTAGATCGTATTG                GCTAA TGG TTGGC                TGGTTTATTATCAAT  49 21
ND012_RS11570 NONE
        dapE NONE
ND012_RS11580 NONE
ND012_RS11585 2531480 .. 2531494 +  -2.7  -3.93262   GCCTAACGCAGCCAA               ACGGC TCGCT GCCGC               TTTACTGTGTTCGAC  54 299
ND012_RS11620 NONE
         bcp 2539141 .. 2539156 + -10.4  -5.28176   TTTAATCAGCAAAAA              GAGCGC CAAA GCGCTC               TTTTTTATGGGTGGC 100 64
ND012_RS11635 NONE
        arsC 2542714 .. 2542728 +  -7.2  -4.77036   TAGCTTGGCGCGCAA               TTGCAA AGC TTGCAA               TTTTTCGTCGTCAGA  83 256
        purM 2546753 .. 2546766 +  -5.3  -2.73681   ACGAATCCCGATGAG               CTTAC TCAG GTAAG                TGATTCGGGTGAGTC  50 86
        purN 2547600 .. 2547626 +  -8.8  -3.50047   AAACGTGTTCCTAAA        CAGGCCAGTAC AGGTAC GT-CTGGCCTG         TTATCGATTTCTGCG  73 39
        speG 2548341 .. 2548359 +   -16  -3.83026   CGCTTAATTATTGCG             CCGGAGCC ATC GGCTCCGG             TTTCATCTGACCGCG 100 34
        ppk1 NONE
         ppx 2557063 .. 2557102 +  -8.6  -3.59031   CTAATACCGTCGCCA  TCGGCGTTCAGGGTCA CATCCCCA TCAGCCTGAACGCCGG   TTAGTTATATTTAAT  73 37
ND012_RS11700 2557408 .. 2557426 +  -5.3  -3.37354   TCCGGTGAATGTCAG             TGCGCAT GACTA ATGTGCA             TTATGAATCACTATG  55 104
        mgtE 2559353 .. 2559363 +  -5.4  -3.05993   CCGCGCGAAAAACCG                 CAGA CTC TCTG                 TATATCTGTCGGTAA  52 330
        yegD 2561021 .. 2561034 +  -2.5  -3.82604   ATTTCCCTTTAAAAA               TAAAA TCTC TTTTA                TTATTAGTTAGATAG  52 240
ND012_RS11715 2562073 .. 2562111 +  -5.4  -4.72473   TGTGTATTTATGGTG   TATTCATCACCCCGAT TTTATTT ATCGGGGTTGTCAATA   TTATTTTTTCATTGC  73 96
ND012_RS11720 NONE
ND012_RS11725 NONE
ND012_RS11730 NONE
ND012_RS11735 2567851 .. 2567876 +  -7.7  -2.72324   GGTAAATACCATTCA         GGGAGATAA CAGATTAT TTATCTCCC          CTTACTTTCAATAAG  60 140
ND012_RS11740 NONE
ND012_RS11745 NONE
        mdtC NONE
ND012_RS11755 NONE
        baeS NONE
        baeR NONE
ND012_RS11770 2579677 .. 2579694 +  -7.7  -3.42354   AATCATCGGCTTTTG             CCAC-CCC TTT GGGCGTGG             TTCTGACTTGAACTC  68 168
        yegQ 2581111 .. 2581129 +   -11  -4.11371   ACACTTAATATCAAA             TGCCACTG ACT CGGTGGCA             TTTTGCCAAATATTA  93 46
        yegS 2582713 .. 2582723 +  -5.4  -4.12226   AAAGCTTCTGCTATT                 TCCA GTC TGGA                 TCTTTTTCTAGTTGT  65 246
ND012_RS11790 2584492 .. 2584503 +  -4.4  -2.72344   CTGGGGGTAAATAAC                CAGT CGGG ACTG                 TCATTACCGGTCAGA  44 289
        xseA 2593568 .. 2593609 +  -2.1  -4.88895   TTCAACCATCCGCCA GAAA-TGCGAAGGGCGCGGA ATA TCCGCGCCCCTCTAACTGAC TTTCTTTATTTCTTT  66 499
        suhB 2624336 .. 2624361 +    -9  -5.28176   CCTCAAAAATTGCGA         TGCCAGTCCG TTAATT CTGACTGGCA          TTTTTTATGGCTGAG 100 56
        csiE NONE
        hmpA 2631656 .. 2631679 + -10.3  -2.98783   ACATCACCTACACCA          CTGGTCAGC CTCCTC GCTGGCCAG           ATTTCATTACCTTTT  76 52
        yhfZ NONE
ND012_RS11990 2633258 .. 2633279 +  -2.3  -4.72386   AATATAATGACGCTG           AATGCGTCTG GAA CAGAC-CATG           TTTTTACATGCTTTA  63 118
ND012_RS11995 NONE
ND012_RS12000 NONE
ND012_RS12005 2635911 .. 2635924 +  -2.3  -2.90615   CGTTGCCCTGCTAAC               CGGCA TGAC TGCCC                TGCTTTCCCACCGCT  42 74
ND012_RS12010 2637209 .. 2637235 +  -7.3  -4.72272   TCAGGATAAGAAAAA        GCCCGTTTCATC TTTT GACGAA-CGGGC         TTTTTAGTCGGCAAC  81 63
ND012_RS12040 2644760 .. 2644775 + -11.8  -2.94912   GATAATCCAAAATAA              GGGGGC ATCA GCCCCC               TCTATCGGTTAACCC  86 58
        mltF 2650877 .. 2650894 +  -6.3   -3.4252   CACCTCGCCCTCTTC             CTGCGCAC GCT GTGC-CAG             TTCTAATGCCTGACG  59 490
ND012_RS12075 NONE
ND012_RS12080 2655976 .. 2655989 +  -3.1  -3.41602   GGTTGCTGATGTTTC               TGGTA CTGC TGCCA                TTCTGATGGGCTGAG  47 357
        nadB 2667590 .. 2667602 +  -7.7  -3.93695   TTGCGCAACGGCAAA                TGCTG ATG CAGCA                TTTCTCCGTCCTGAC  70 155
        srmB 2669736 .. 2669760 +    -5  -5.67063   GCACTCATGCAAAAA         GCCGCT-GAAT TCAC ACTCAAGCGGC          TTTTTTTATGGTGAA  91 58
         ung 2673567 .. 2673578 +  -4.4  -4.57073   TGATTCCGCAACCAC                TTCG ATAC CGAA                 TTTTTCCACAGCATC  68 253
        nadK 2675008 .. 2675019 +  -4.4  -3.05844   TACTGTATATAAAAC                CAGT TTAT ACTG                 TATTCAAATACAGCC  47 59
        recN NONE
        bamE 2677302 .. 2677322 +  -7.5  -5.59502   GACGGTTGATAAAAA            TATGGCGCG TAA TGCGCCTTA            TTTTTTGGTTTTTTC 100 149
        smpB 2678671 .. 2678687 +  -5.9  -2.64061   GAAACATGCTAATCG              TTAAGTC ACT GGCTTAA              TAGGTTATAGTTCTG  52 22
        ssrA 2679140 .. 2679165 + -11.8  -5.14477   AGTGAAGTCTACTAA         GCCCGCATGG AACCAG CCTTGCGGGC          TTTTTTACGTCTATA 100 62
ND012_RS12215 2680625 .. 2680639 +  -7.2  -3.05022   TATACCCTCCTTCTG               TTATGC AAA GCATAA               TATGTATATAAAACC  61 152
ND012_RS12220 NONE
ND012_RS12225 NONE
ND012_RS12230 2684682 .. 2684698 +  -3.8  -4.41633   TGAAGATCACAGGAA              TTTGAT TTAAT ATCAAA              TTATTTTTACAGATC  65 494
ND012_RS12255 2688832 .. 2688869 +  -6.6  -4.37067   AACGATTGATTTTCC   GTGAATTTATTGATCGG CTTAA CAGATCAATAAATT-AC   TTTTGATAGTCTTTA  74 90
ND012_RS12260 2689337 .. 2689352 + -10.4  -6.22802   GTGTTAGCCAAAAAA              GCTCCC TTCT GGGAGC               TTTTTTTTTATAAAC 100 45
ND012_RS12290 2695546 .. 2695558 +  -6.3  -4.88067   ATAGATATGCCTCGT                GTGAT TTT ATCAC                TTTTTCTGCATGGAT  80 130
ND012_RS12325 NONE
ND012_RS12330 2702246 .. 2702268 +  -3.2  -3.17571   TTCATTGTTGTTGCC           ATGCCCCGCC CTG GGTGGGACGC           TTCACTTCGACCCTT  46 97
ND012_RS12335 2704806 .. 2704832 +  -2.2   -3.8165   AATATCCCTCTAATG         CAGTTTCAGGGA AAT TGCCTGTGATTG         TGTTGTTTTATTCAA  51 2
ND012_RS12340 2705476 .. 2705495 +  -2.9  -3.66356   CATATTCCAGCATCT            CTGTCGCT ATTGG AGCGA-AG            TTTCACATTGACGCT  50 62
ND012_RS12345 2706478 .. 2706488 +  -2.6  -4.72272   AAGATTAATGCAACA                 TTAA CGA TTAA                 TTTTTCCTGAGAGAA  64 5
ND012_RS12350 2707260 .. 2707270 +  -4.6  -3.62597   TTACAAGATAATTCA                 GGCG GCC TGCC                 TTGTTGCGCCATACG  57 463
ND012_RS12370 2708913 .. 2708934 +  -2.9  -3.05384   AAAAACTCTAAAGCT           GTGGCCAGT TTTT GTTGACCAC            TTCAATAGCGCCAGA  43 8
ND012_RS12375 2709737 .. 2709781 +  -8.2    -3.492   ATATAAAATCTCGTT TTTGA-CATGACAGTACTAAT TTTT ATTGGCACTGTCATGATTAAA TATTTAAATTGATTT  71 68
ND012_RS12380 NONE
ND012_RS12385 NONE
ND012_RS12390 2723465 .. 2723487 +  -2.6  -3.02511   CTACACCAGTATGCA           GATGAAACCT AGT GGGTCGCATC           TATTAGGAGAATACC  43 21
ND012_RS12395 2726713 .. 2726729 +  -5.8  -3.55563   GCTGATTGGGACGCT              CTGCCA CGAAC TGGCGG              TTTACCAGGTCCGCT  59 308
ND012_RS12455 2736417 .. 2736438 +  -4.4   -4.2349   TTAGTGATGAGCAAA           GCGGTTGG TTTTAT TTAACCGC            TTTTCCCTCTGGAAC  61 51
ND012_RS12460 2738484 .. 2738497 +  -3.7  -2.81725   TTGAATATGGTCTAT               GGCTG ATTT CTGCC                TAATTAATGTGACCT  45 100
ND012_RS12465 NONE
        lldD 2741569 .. 2741590 + -14.5  -2.78725   GCAGCACATATAAAA           GCCGGAGAA ACAT TTCTCCGGC            TCGTTACTCAGATAT 100 83
ND012_RS12485 NONE
ND012_RS12490 2745732 .. 2745743 +  -5.8  -2.64735   CGGGAACTGAAACCG                TGGC AAAT GCCA                 TAGTGTCCCTCGACT  51 145
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 2751096 .. 2751122 + -10.9  -2.98381   CGCTAAAACGATCGA         GGGTCTTTCAG ACTGG CAGAAAGACCC         TGCTTTGCTCACTTC  79 49
        proV NONE
        proW 2754052 .. 2754066 +  -7.8  -3.26471   ATAACCATCGCCCTG               CGGGTT GAT AGCCCG               TTGCTCTCAAGCTGC  66 40
        proX 2755298 .. 2755309 +  -4.4  -2.78384   ACGAAAACAAACCTC                GATC CTGC GATC                 TCTGATGGGGAAAAC  46 56
ND012_RS12540 2757456 .. 2757469 +  -5.3  -2.97925   CCATTTACATTATTA               GTAAC CATC GTTAC                TGTATCGTCTGAAAT  52 401
        mprA 2758300 .. 2758311 +  -5.8  -3.05816   ATTGCAGGCGAAGAT                CGGA CTGA TCCG                 TTCACTGGACGGTGG  54 311
        emrA NONE
        emrB 2761143 .. 2761169 + -13.8  -4.52589   TCGGATAAAATAAAA         GGGACGCTGA CATATCA TCAGCGTCCC         TTTTATATCGAACAA 100 52
        trxC 2763040 .. 2763070 + -11.2  -4.40601   CGCGGCTAACACCGC       CGCTCTTACCGA GTATTTA TCGGTAGGGGCG       TTTATTCTGTCACTT 100 79
ND012_RS12575 2763881 .. 2763891 +  -3.2  -2.73994   CAGAAAACGGCTAAA                 GTCT GTC AGGC                 TACTCTTAGCAGGGT  43 27
ND012_RS12580 NONE
        pssA 2768235 .. 2768265 + -16.3  -5.10154   ATCAAGCGGTACAAG       GCCTGAGTTCTGT ATTCC ACGGAACTCAGGC       TTTTTAGTTTTAACT 100 91
ND012_RS12590 2769161 .. 2769182 + -12.9  -3.81089   CTGAAAACGCCAAAA           GCCCCCGGC GCAA GCAGGGGGC            TTCTTCATCTCTGTC 100 160
        metN NONE
ND012_RS12625 2777427 .. 2777444 +  -2.6  -3.06671   TAATCAGCCTGCGAT             AGCGCT CACAAC AGCGCA              TATTAAAATGAATGT  43 41
ND012_RS12630 2778324 .. 2778347 + -16.8  -4.07877   TAGTCACTATATCTG          CAAGACGGGC TTCG GCCCGTCTTG           TTATTTGTGAGATAG 100 58
        rcsF NONE
        tsaA 2779612 .. 2779624 +  -4.1  -3.40403   CTACACGGCAGCCTG                TTGCA ATT TGCAG                TTCTAATGGAACCAA  51 116
        proS 2781390 .. 2781406 + -10.9  -5.11063   TCAGCGACAAAAAAA              GCCCTAT TAA ATAGGGC              TTTTTATTGCATCGT 100 51
ND012_RS12665 NONE
         rof 2784014 .. 2784029 +  -3.2  -4.41241   ACTTCGGCCTGACCA              CCGG AACGCCCA CCGG               TTTTATAAGCCTTTA  63 185
ND012_RS12690 2787501 .. 2787514 +  -3.9  -2.94924   TAAATAAAATATAAA               TTCAT CATA ATGAA                CTTTATACATGGAGG  46 34
ND012_RS12695 2787909 .. 2787933 + -14.3  -4.65895   TTTGCCAATAAAAAA          CCCGGAGCCAA ATT TTGACTCCGGG          TTTTTAACTGAAAGA 100 55
         map 2808944 .. 2808959 + -11.8  -5.26316   GAGTAATCACGACCA              GCCGGC GATC GCCGGC               TTTTTTATGGGCTGC 100 35
        glnD NONE
        dapD 2812570 .. 2812590 +  -6.1  -5.84432   TGACTAACATTCAAT            TGGCGGG CTAATTA CCCGCTA            TTTTTTTGTCTTGTA 100 34
ND012_RS12805 2813116 .. 2813141 +  -8.4  -5.80951   TATCGGATCAAAAAA         GTGGCG-ACAA GGATA TTGTTCGCCAC         TTTTTTATTTTCACT 100 57
        queF NONE
        ppnN NONE
         xni 2820078 .. 2820094 +    -5  -3.75378   TGTCATTAACCTCAA              GGGAGC CGGAA GCCCCC              TTATATTATGCAAAT  59 202
        csdA NONE
        csdE 2825495 .. 2825511 +  -5.1  -2.52946   TGTCCGCCAGCACCA              CCGGT AGCAATC ACCGG              AATTTTATAGCGACG  48 388
ND012_RS12885 NONE
ND012_RS12890 NONE
ND012_RS12895 2827834 .. 2827847 +  -8.1  -6.02919   CTTTCTTACTCAAGA               CACCC ATAT GGGTG                TTTTTTTGTTTCTGG 100 55
        argA 2830975 .. 2830988 +  -8.1  -4.98255   GGTCAGTGACCTGAA               GGAGC CTCT GCTCC                TTTTTCTGATTAGCA  95 234
        mutH 2851348 .. 2851359 +  -2.2  -2.64888   TGTGTTTCTTTAAGG                TGTG TAGG CGCA                 ATGTTTGAATGGATT  40 197
ND012_RS12975 2852088 .. 2852119 +  -2.8  -3.11701   GATATAAGCAAAAAT      ACCTACGGGTGCGA CCTC TCGCACCCGTCTCA       CTCTTTTTTACTCAC  44 34
ND012_RS12980 2853305 .. 2853325 +  -9.7  -4.41047   TCTCCAACGCCAAAA            GGCCGTTGA TAT TAAACGGCC            TTTTGGTTAAAAAAT  93 55
ND012_RS12995 2857283 .. 2857294 +  -4.4  -2.60283   CAGGATCGAAGTTTG                TCAG CAGT CTGA                 GTCTCTGTTTTATTT  45 72
        galR 2858866 .. 2858877 +  -5.8  -3.05384   CAATCAGCGGCTCAT                GGGA AAGA TCCC                 TTCCATCCGCAGGCA  53 457
ND012_RS13010 2861309 .. 2861321 +  -3.4  -3.19668   CGCGCCATTGCTCAT                TGGT GGCAA ACCA                TTCGATTAAATAATC  46 385
ND012_RS13020 NONE
ND012_RS13025 2863889 .. 2863919 +  -6.2   -3.6422   GATCGTTACAAAGAG       GGCTAATGACCT TAATTGT GGGTGATTAGCC       TCTTTTCAGAGAGTC  63 39
        fldB 2889208 .. 2889226 +  -5.8  -3.31792   GCCAAATACGTTTTC             GGCGGCGG CTG CCAGCGCC             TTGTAACGATAATAA  57 277
        ygfZ 2891072 .. 2891112 + -11.4  -2.91144   TAAGCTATCAGGTCA TCATGATATTTAGAGGCCG GTTC TGGCCTCTAAATATCC-GA  TAATTTGCCGAGTCG  83 38
        zapA NONE
        ssrS 2902858 .. 2902870 +  -4.8  -3.75153   CCGATTTGTAAAATA                GGCA GTTTA TGCC                TTTCAATTCCCAGCA  59 83
ND012_RS13225 2903662 .. 2903676 +  -2.8  -3.61106   GCACTGGTTTGCAGA               TACTGC GCG GCAATA               TTGATGTTTTGTTCG  49 225
ND012_RS13240 2906917 .. 2906940 +  -8.9  -2.91997   TCAAAGTGGATAGTT          TGCTGCTCA TAAGTT TGGGCAGCA           TCGTTCTGTCTCCCG  65 94
        metK 2920716 .. 2920727 +  -4.4  -2.97403   CAGGGGCGAGGTTTG                TCAG CAGT CTGA                 AATTTTTTTATGCCT  47 210
ND012_RS13310 2922621 .. 2922634 +  -2.4  -3.38738   AAAAACTGCAATTTA               TGGT GACACA ACCA                TCTTAGTTATTTGAT  45 6
        endA 2923499 .. 2923532 +  -2.3  -2.93853   CCTGCGGTTATCCTT     TTATTTCGCGTCGTT AACC GGCGACGCGCTAAAA      CTTTCGTTACGGAAG  42 78
        rsmE NONE
        gshB 2925270 .. 2925307 +  -8.5  -2.85503   AAAGTCTGATTAAAA   TCACCGGTTATGGCA TTTTTACC TGCTGCAACCGGTGA    CTTTCGCTATTCCCA  64 32
ND012_RS13330 NONE
        ruvX 2926440 .. 2926451 +    -3  -4.58724   TTTTCTAATTTTTCA                TCAA TATA TTGA                 TTTTAATTATATTTA  65 99
        aguB NONE
        aguA 2928783 .. 2928813 + -11.1  -3.14564   CCACGCTTTCTGTAG       CACCAGCCCGGAT CTTGA ATCCGGGCTGAGG       TTAATGACAAAGTGC  79 51
ND012_RS13355 NONE
        proC 2931646 .. 2931673 +  -3.4  -3.67188   AAAACAACACGTTAA        CCCCGAATCTTTA TTC TTGGGAT-CGGGG        TATTTTAAACTGACT  51 59
ND012_RS13365 2932249 .. 2932262 +  -4.5  -2.64735   AATGGATCTGTTAGG               CGAGC TCTG GTTCG                TACTGTGAGTGCAGT  48 4
        yggU NONE
ND012_RS13375 NONE
        hemW 2934558 .. 2934572 +  -5.6   -5.5074   GTCAGCGGTCTGAAA               CGGGTG TAA TGCCCG               TTTTTTATTCGATTG  90 209
        mutY NONE
ND012_RS13410 2939057 .. 2939072 +  -6.8  -2.87003   ATCAGTGACACCCAA              GGGTCA GCAA TGGCCC               TCATGTTATTCCTCA  57 33
        mltC 2940210 .. 2940235 + -12.7  -6.06723   TGGCAATATAAAAAA         TGGCAC-AGCTC ATC GAGCTTGTGCCA         TTTTTTTTTGCACCG 100 52
ND012_RS13420 2940589 .. 2940612 + -12.5  -4.80882   AAAGGCTCTCGATTA          TCCCGCCTA GTCGCA TAGGCGGGA           TTTTTCGTCTACAAT 100 171
ND012_RS13430 NONE
ND012_RS13435 NONE
ND012_RS13440 2945211 .. 2945262 +  -7.3  -2.81464   TTGAACTTATGAAAA TCTGGACCTCGGTGAACAGTTAG TGTTTT CTAACTGTAGCCGGAGGTCTGGA TATGATGAATGCTAA  59 45
        fepB 2961781 .. 2961798 +    -7  -2.71364   CCATGGCCTAAACGG             TCCGTG CATTAA CACGGA              TCGTTACCCACATCG  56 92
        fepD NONE
        fepG NONE
ND012_RS13520 2966227 .. 2966249 +  -4.9   -4.2679   GATTAGCCTGGTCAG          GGTGGTGAGT GATA ACTC-CCATC           TTTTGCTAGACGTTA  66 47
ND012_RS13525 2967325 .. 2967352 +  -3.4  -2.61831   GACATCATGGTGATA        TGCGAAC-AATCC AAT GGATACGTGCGCA        GATTTTTCACATAAG  42 160
ND012_RS13545 2978786 .. 2978813 + -13.4  -3.46068   TAATTTAGTCGCTAT        GCCGCGCCGATC AAAC GATCGGTGCGGA         TCTTTAGGTTCCGAC 100 45
ND012_RS13550 2980156 .. 2980177 + -15.9  -2.79694   TCCTTGTCGGCTCGT           TCCGCGCCA TCCT TGGCGCGGA            TGCTTGACTCTTCTA 100 142
ND012_RS13555 2981374 .. 2981391 +  -2.7  -3.31232   TAGTTTGTAAAATAA             CCATTTA ACCT TAAAAGG              ATTTTATATGAAAAA  46 163
ND012_RS13560 2981624 .. 2981643 + -13.6  -3.32022   TTTAACCATCAAAAA            CGCGGTGA ACAA TCACCGCG             TTCCTCTATAAAACC 100 53
ND012_RS13565 NONE
ND012_RS13570 NONE
ND012_RS13575 NONE
ND012_RS13580 NONE
ND012_RS13585 NONE
ND012_RS13590 NONE
ND012_RS13595 NONE
ND012_RS13600 2989321 .. 2989341 +  -5.6   -3.5936   CTACCTCATTGGAAA            TAGTAAAT CATCA ATTTACTA            TTTGGAAAGTTTGAA  61 236
ND012_RS13610 NONE
        tadF 2990849 .. 2990871 +  -2.7   -3.1211   TGCAATCCTCTGCCA           TCATGGTTG AAAGG TAACCCTGA           TTGACTAATGTAATA  44 9
ND012_RS13620 2992548 .. 2992578 + -16.3  -3.53012   TTTGACGGTCTACAG       GCAGATCGCCAAC AAACA GTTGGTGATCTGC       TTTAACCGACAGAAA 100 264
        metC 2995484 .. 2995524 +  -3.3  -3.22618   GTAACATGGCATAAA G-CGGCGAAGATGCCAGG TAACTC CTTGCCATTTTCACCGGC  TATCTTCTATAAACC  46 37
ND012_RS13640 2996349 .. 2996382 +  -7.3  -3.18023   TAATACGACCAGACG     CACCGATCATGTCGC ATTC GCGCGGAGATCGGTG      TATTGGTCATACTGG  62 38
        yqhD 2998745 .. 2998766 +  -5.9  -4.49311   TAAGTAAATAACAAA           GGGTAAG CGTAATTT CTTACCC            TTTTCTCATCATAGT  73 50
        dkgA 3000357 .. 3000373 +  -9.3  -3.03124   GATGCCGCGAAGCAC              GCCGCGC CTC GCGCTGC              TCTTCCAACGTAGGC  66 353
ND012_RS13680 3008726 .. 3008747 +  -2.1  -3.55761   ACAATCCCTTCTCCT           CGTAGCGCC AGAT GCCGTAACG            TTTCACCGCTGGATG  47 333
        tolC 3015877 .. 3015908 + -14.5  -3.11569   TTTTGTCGGTTGTCG      TCTCCGGACGCAG TATCTT CTGCGTCCGGATA       ATTTATCTGTCTCTT 100 56
ND012_RS13720 NONE
ND012_RS13725 3018007 .. 3018026 +   -10  -4.67353   CCGTAATATGATCAA            GGGAAGGC GAAT GTCTTCCC             TTTTTACATCAATAA 100 48
ND012_RS13740 3020512 .. 3020531 +  -4.9  -5.63236   AATATCGACAAAAAA            GGGGCTA AATAAA TCGCCCC             TTTTTCTTTTTAAAT  91 69
ND012_RS13765 3027926 .. 3027946 + -14.7  -4.88918   TTAAATCGAACATTA            TCGGCTGCC ATC GGCGGCCGA            TTTTCTTTGCACTGC 100 53
ND012_RS13770 3029355 .. 3029374 +  -4.9  -2.79878   GACGCAGAAACAAAA            AGCCCTG CAAATA CAGGGCC             ATTTAGGTGAGTCAC  49 92
        plsY NONE
        rpsU 3033494 .. 3033521 + -13.4  -3.94823   GTAGTTGCAACGAAG        GCCGTGCTTTCC GAAA GGAATGCGCGGC         TTATTCTCGTTTATG 100 98
        dnaG NONE
        rpoD 3037351 .. 3037363 +  -7.7  -2.71011   AACTGTACCCCAAAA                GTTGG ACA CCAAC                TGATTAAGGCGCAGT  60 74
ND012_RS13810 3037627 .. 3037654 +  -9.2  -5.01811   CACCAAATAAAACAA        GGAGTTAGATGA GAAA TCGTCTGGCTCC         TTTTTCGTTTCATGC 100 36
        ltrA 3043120 .. 3043147 + -17.8  -2.71268   GATTAAAAACGAAAA        GGCCATGCTTCC CGAA GGAGGCATGGCC         TGATGTGTAGTGAGG 100 272
ND012_RS13875 NONE
ND012_RS13880 NONE
ND012_RS13885 3050251 .. 3050275 + -12.9  -3.01712   GTCTGATTAACCACA          TCGGGCTGC TTTCTGC GCAGCCCGA          TCTTCGGCAACGACG  95 35
ND012_RS13890 NONE
ND012_RS13895 3052706 .. 3052720 +   -10  -2.84794   TTATTATAAAACCAT               TGCCAC TGA GTGGCA               TAGTTCTGCAATTCA  68 315
ND012_RS13910 3054644 .. 3054669 +  -2.5   -3.1352   CCAGTTGCATCATAG         GGCTGTAGT-TC CCT GATACGCCAGCC         TGTATTGCCTTGAAG  43 60
ND012_RS13925 3057663 .. 3057693 +  -7.7  -5.63517   CTATTTTATTACTAA       GGCTAGATGTC ACAGAATCC GACATTTAGCC       TTTTTTATTTAGCCA 100 53
ND012_RS13935 NONE
ND012_RS13940 3059245 .. 3059255 +  -6.8   -2.7814   TGCCATTATTGGTAG                 CGGA ATT TCCG                 GTTTGACCTGTGCAT  57 53
ND012_RS13995 3082179 .. 3082195 +  -9.4  -3.14132   GCGAAATAAACAGAA              CCCCAC CCAAA GTGGGG              TTCGTCAACGGCAGG  72 88
ND012_RS14005 3086343 .. 3086386 +  -7.5  -2.98035   CACTTTTAACACGGA TACCGATGCTGGCAAAGGTT GAATG AAGCGT-GCCTGCATCGGTA CATTTTTTGTTTAAT  61 32
ND012_RS14010 3087051 .. 3087063 +  -5.5  -3.12327   ATCAATTCATTTTCG                CGACC GAT GGTTG                TCTTAACTGTCGGCC  53 60
ND012_RS14015 3088465 .. 3088490 + -11.1   -5.8096   GCAGCTCAGACATAG         CGGCTGGCGTC TTCC GACGTTGGCCG          TTTTTGTTTTTTATG 100 386
ND012_RS14020 3089534 .. 3089556 + -13.4  -4.47183   CCTGATAATCTATTA           CACGGGGTGC CAA GCACCCCGTC           TTTATTTGGCTGATA 100 56
        sstT 3091093 .. 3091110 + -10.5  -5.28315   TGATACTCGCAATAA             GGGCGGC GTAA GTCGCCC              TTTTTTACGTTTTCT 100 48
ND012_RS14050 3098222 .. 3098242 +  -8.9  -5.04249   ATACTCTTTGAAAAA            CCCGGCTGA TAT TTTGCCGGG            TTTGTTTTTTCAAGC 100 57
        exuR 3099234 .. 3099247 +  -5.3  -2.58418   GCAAAATGACCTCCC               TTGCA GGGT TGCAA                ACTTTTCTCTGAGGG  49 41
ND012_RS14060 3099994 .. 3100007 +  -3.9  -3.48593   AGATATTCCGTTTTC               GTTAT CATA ATAAC                TTATATAAAAAAATA  51 16
ND012_RS14065 NONE
        mzrA 3101202 .. 3101227 +  -7.5  -3.05769   GCTAATACTTCTCTC         TACGGGGGAAT CATC ATTCCCCCGCC          TATCTGATTTGACCG  61 36
ND012_RS14075 NONE
ND012_RS14080 NONE
ND012_RS14085 NONE
ND012_RS14090 NONE
ND012_RS14095 3103751 .. 3103772 + -14.5  -3.97307   GCGGTTAATCTCTAG           CGCCCTATC ATCA GATAGGGCG            TTGTTATTGGGTGGG 100 50
ND012_RS14105 3106026 .. 3106055 +  -6.3  -3.00946   TCCCCTAAAAGAGAA       AAACCCTGTGCGG CAAG CCACACAGGGTCA        TCATTTATCGAGGGA  55 498
ND012_RS14125 3109493 .. 3109512 +  -9.2  -3.10164   CCTAGGGGTTTTAGT            ACCCCGTC TCAG GACGGGGC             TTAAATAATGGATAA  72 48
ND012_RS14130 3109892 .. 3109912 +  -7.5  -3.72073   GCGGATTGATCATTC            TTCTCCGGC AAA GCCGGGCAA            TTCATTTTACTGAGT  68 32
        diaA NONE
        dolP 3111127 .. 3111151 + -11.5  -5.75599   GTAAAATAAACACCA          GTGAGCCTGAT TTT GTTAGGCTCAC          TTTTTTTCTAGTTTG 100 32
        gltB NONE
ND012_RS14170 3123093 .. 3123115 +  -3.4  -4.05033   AGCCGTGGATTTATC           GTTATGACTC ACC GATACATAAC           TTTCTCTAGCGTGAG  56 174
ND012_RS14175 3124022 .. 3124066 +  -5.5  -3.04517   CAGGTCGGCCACTGC GGGAAGGCGGTGGAGGCTC ATCATCA GTGCCGCCATCGCTATCCG ATTTTGCCGAAGAAT  51 135
        zapG 3128459 .. 3128488 + -13.7  -5.04868   ATATCAGTCTCTTAT       CCGGATAGCGT TCCTACTT ACGCTATCCGG        TTTTCTTTAATTTAC 100 47
        degQ 3130103 .. 3130129 +   -13  -3.11459   TAATTTGCAGAAAAA         TCGGACACAGTG CAA CGCTGTGTCCGC         TTAACTCGTGCTATT  95 38
        degS 3131283 .. 3131309 +  -7.3  -5.06414   AATTACAATAAAAAA        GCCAG-CCGGTT AAAG AACCTGACTGGC         TTTTTATTGGAGCGG  89 54
ND012_RS14255 NONE
        kdsD NONE
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB 3140802 .. 3140817 +  -4.6  -2.94464   AAGCGCGTCTATTTA              GGCGAA GAAT TCCGCC               TCTGATATTAGTCTT  50 5
        rpoN 3142284 .. 3142300 +  -3.7  -3.53012   CATCCCGCCGTCTAA              CCAAC GTAAACA GTTGG              TTTGACCCGAACAGA  51 4
         hpf 3142669 .. 3142687 +  -4.6  -3.05596   AGGTTCTTCACTCAC             TGTAGC CAGTCGC GCTACA             TTACCTGAACCGGTG  50 78
        ptsN 3143284 .. 3143313 +  -3.5  -3.05644   TATTATTTTCCAATG       ATGGATTCCGGCA AGTA TGCCGGAATAAAA        GTTTCTAATTGTGGC  46 66
        rapZ NONE
         npr 3144840 .. 3144856 + -13.7  -6.02914   AACCGATCTTATCAG              GCCCCTC ATT GAGGGGC              TTTTTTTTGTCTGCG 100 377
        pyrB NONE
        pyrI 3146415 .. 3146444 +  -2.7  -4.55287   CATTGCAGGATTTTA       TGCG-GCGGGGACT GTG AGGCACCGCACCCA       TTTTATGTCCCTGGG  61 59
        ridA 3146966 .. 3146977 +  -4.4  -2.78384   CGGCTGAAAAACCTC                GATC CAGC GATC                 TCTGGTGGGGGAAAC  46 66
        mgtA 3155212 .. 3155224 +  -3.3  -4.01045   ACCTTGCTTCCGAAT                CCTGG AAC CCATG                TGTTTTTCATAATAT  58 520
         rnk 3156743 .. 3156769 + -10.8  -4.65916   CGATAAATCAGTAAA         GGGTGGCAGCTC GAC GAGCTGTTCCCC         TTTTATTCGCCTGGA 100 79
ND012_RS14365 3159938 .. 3159949 +  -5.8  -3.56092   GTTTGAGAAACGATC                GCCA CCAA TGGC                 TTTCCCCGGTAATAC  59 511
        aaeR 3166365 .. 3166375 +  -2.4  -3.90744   CCCACCCCCACAGGC                 AGGC TTT GCCC                 TTCTTTGCCGCAGAC  52 130
ND012_RS14450 NONE
        msrP NONE
        msrQ 3182598 .. 3182608 +    -4  -3.17941   TGATAAGACCAGTAT                 TTAG CTG CTAA                 TTGCTACGATATCAT  49 124
        aroQ NONE
        accB 3183694 .. 3183704 +  -3.2  -3.17688   TCATCGAATAACGAG                 GCGT TCC ATGC                 TTGATAAAATCGTTA  46 30
        accC 3185072 .. 3185089 + -12.7  -5.79595   TTCGCCTCATGTTAA             GGCCGGT TAAT ACCGGCC              TTTTTTATTTTACGG 100 47
ND012_RS14480 NONE
        panF NONE
        prmA 3187867 .. 3187900 + -10.1  -3.65201   TCCTACCTTGCTTCT     CCCCGCCGACAGCAT CAAC AAGCCGCTGGCGGGG      TTATTCACCCTATTC  80 41
        dusB NONE
         fis 3189652 .. 3189675 + -12.4  -5.56673   GGTGTTGTTTAAAAA          GGCGTACTCC ACAC GGAGAACGCC           TTTTTTATTATGAGT 100 55
        lpxP 3191681 .. 3191708 +  -9.8  -3.21726   TACATCCTTGTCGGC        TTGTCCGCGCTA TCTC TGGCGCGGACGC         TTGACTCTTCTACCG  74 143
ND012_RS14530 3194710 .. 3194754 +  -6.3  -3.35349   GACCAGCTCCATTCA CGGGAATAAGCAGGCGGAGC CCGATA GCTCCGCCCGCCTAA-CCGG TTATCAGCCTTCTTT  59 17
        uvrA 3203051 .. 3203077 + -13.1  -4.44046   GCAAGTCATAGGTTA         TTGGGGGCGAT AATAC ATCGCCTCCAA         TTTATTTCACATCCA 100 30
ND012_RS14580 3208935 .. 3208956 + -10.2  -4.86033   TGACGCCAATAAAAA           TGGGTTCC GTTTCA GGAACCCA            TTTTTATAACGCTTT 100 54
         zur 3211636 .. 3211668 +  -9.8  -2.99874   GCATATTGATGCGTA      TACCACGCAGCACC GGTAA GGAGCCGTGTGGTA      TCTATGCTGGTTTCT  73 194
        plsB 3215500 .. 3215528 + -13.3  -3.18264   ACCAGAGCATAGCGA        CAAAAAAGGCCAG ATT CTGGCCTTTTTTA        TTGATCGCTGGCAAA 100 43
        malE NONE
        malF NONE
        malG 3225551 .. 3225569 + -13.1  -5.92399   GTAATGTGTCTTTAC             GGCGGCC TTTAT GGCCGCC             TTTTTTATTTTATTC 100 137
        lysC 3229895 .. 3229915 + -14.7  -2.70389   AATAAATAACAGTCA            GCCGGAGGG TTA CCTTCCGGC            GCTTTTTCATCTTGG 100 36
ND012_RS14675 3232155 .. 3232165 +  -5.4  -3.31144   ATTAACCCACACAGC                 CGTT GTT AACG                 TTATCAAAATGGGAA  55 51
ND012_RS14680 3237126 .. 3237151 +  -8.9   -5.4148   TCTTGAAAAACAAAA         CCGGTGCTGCC TGAT GGAAGTGCCGG          TTTTTTAGTTATTTA 100 60
ND012_RS14775 3265117 .. 3265128 +  -4.4  -3.21276   AATAAGTCCCACTTC                TGCT TTGT AGCA                 TATTATCGGCCGAAC  49 296
ND012_RS14780 3266342 .. 3266367 +  -5.3  -5.04385   TAAAACTCGTGAAAG         TAGGCACTGCC TGAT GGAAGTGCCGG          TTTTTTGACCCTGTA  78 85
        iclR NONE
        purH 3286660 .. 3286678 +  -3.8  -2.89569   TCGCGATGATCTTTA             CTGAGATG CGT CATTTCCG             TCATTAATTTAACCG  45 0
        purD 3288023 .. 3288051 +  -4.5   -4.4768   GTTTTAGTCAGAATG        GCAGAGGGTGT CGCGTTT GCGCCCTCTTC        TTTATTATATTAGTG  68 53
         rsd 3293379 .. 3293389 +  -6.8  -2.63164   TCCAACCGCGGCAGA                 TGGC CGC GCCA                 GTTAATTCAATCTGG  56 10
        thiC NONE
        thiE NONE
ND012_RS14905 NONE
        thiS NONE
ND012_RS14915 NONE
        thiH 3299354 .. 3299371 + -12.7  -3.61764   TCAGACAAAAAAAAA             CCGCTCC CAAA GGAGCGG              TTTGCAGGTTGGTGA 100 45
        coaA 3315102 .. 3315122 + -11.9  -4.69214   TGAGAAAATAAACTA            TCGGGAGAT ATC GTCTCCCGA            TTTATTTATTAAATA 100 30
        fadB NONE
        fadA 3331414 .. 3331430 +  -7.9  -5.60993   GTTGCCATTTTTCCC              GCCTGTC AGG GGCGGGC              TTTTTTTCTCCACCG 100 101
        rfaH 3335755 .. 3335778 +  -8.2  -2.77182   AAAGCTATTTAGCAA          GGCAAGTG CGATGCAA CACTTGCC           TCATTAGGTATCAGC  64 39
ND012_RS15145 3350236 .. 3350252 +  -8.7  -3.09933   GGGATTCGCTGTGCC              GCTTTGC GCA GCAAGGC              TTCAATCCATTCGAC  64 399
        metR 3353441 .. 3353453 +  -3.4  -3.43042   CCGCCAATGATAAAA                CTCA GCCAG TGAG                GTTTTTCCTGCCAGA  49 31
ND012_RS15165 3354824 .. 3354839 +  -3.2  -2.93585   CCAATTTAACAATTC              TCTGGC TTGC GCTGGA               TGGTTTACCGTGTAG  45 170
ND012_RS15195 3360595 .. 3360609 +   -10  -2.84794   TTATTATAAAACCAT               TGCCAC TGA GTGGCA               TAGTTCTGCAATTCA  68 107
ND012_RS15205 3362020 .. 3362039 +   -10   -4.3129   ATAAAGAGTGAATTA            GACGGGGT GAAA ACTCCGTC             TTTTAGTCATAAATA  93 47
ND012_RS15210 NONE
ND012_RS15215 NONE
ND012_RS15220 NONE
ND012_RS15225 NONE
ND012_RS15230 3367472 .. 3367484 +  -4.1  -3.35996   GGACTTATTTCATTG                TCTGA GGC TCAGG                TTATACCTGAGCCTC  51 72
        panM 3373816 .. 3373826 +  -8.2  -4.82901   ATGCTGACCATCTCT                 GGCG TAG CGCC                 TTTTTGTGGCCCGAA  88 514
        rsmD 3382477 .. 3382489 +  -6.3  -2.63616   AATGCGGTACAGGAG                CAACA AGA TGTTG                ATTAATCTTGGTCGT  54 8
ND012_RS15305 3382814 .. 3382837 +  -9.6  -3.08312   GAAATCAATATATCG          GGTACCTTGT AATT GCAAGGTGCC           TTGCGTACCTGGGTT  69 83
ND012_RS15320 3384587 .. 3384614 +  -7.6  -5.54907   CCTTTACTTGTAACC        CCTACGCCCCAC GCTA GTGGGGTGTCGC         TTTTTATTTTGTCCG 100 28
ND012_RS15325 3387079 .. 3387107 +   -11  -3.16608   TACCTCCTTGTCGGC       TCGTTCCGCGCCA TCCC TGGCGCGGA-CGC        TTGACTCGTTTGCCT  79 107
ND012_RS15335 3388386 .. 3388411 +  -4.6  -2.80935   GGGTTAACTCGTAAG         GGTGGCCG-GC CTTGC GCATGGCCCCC         TGTCATGCATAAAAT  49 47
ND012_RS15340 3389087 .. 3389114 +  -5.4  -2.85668   AACCGGTTAAGCGTT        AAGAGAGCGCGG ATCA CCGCGCTCTGAA         TATGCTATGCCAATG  50 40
ND012_RS15360 3393609 .. 3393619 +  -5.4  -3.25204   ATGCCATTGGAGGCA                 CTCA TGT TGAG                 TATATTTAAGCCTAC  55 186
        glpT 3394995 .. 3395024 + -12.1  -5.26316   AGTCTCTGTGTTTCA       GGCCGTGCCGTTA TATT TGGCGACACGGCC        TTTTTTGTACCCTAA 100 53
        glpQ 3396399 .. 3396418 + -12.2  -3.15197   TTGTCATTAACCTCA            GGGCGATA ACAC TATCGCCC             TGTTAACCTTTATTC  86 283
ND012_RS15400 3402773 .. 3402786 +  -2.4  -3.32432   TCGGCACGCTAACTT               CAGT ACACTC ACTG                TCTCTCTTTTCTGTA  45 78
        rarD 3403721 .. 3403743 +  -6.9  -2.70932   TGTCCTGAAATATCA           TGCCCGTCG ATCGG TGTCGGGCA           TGATTAACCCGCCGG  56 45
ND012_RS15415 3405651 .. 3405672 + -11.6   -3.6608   AACCACGTAAAAAAA           CCGGAGTC CCAAAA GACTCCGG            TTTGACTACCCTGCT  90 40
ND012_RS15430 3409039 .. 3409061 + -12.8  -2.65906   TACCGTACAAACGGC           GACTTTCTGC ATA GCAGAGAGTC           AATTTTTGCATTGCG  81 372
        cyaY 3414950 .. 3414964 +  -4.2  -4.62441   GCAGTTGGAACTGTT               GTGCTG GCG CAGCAA               TTTCTTTCTCTGGCG  68 105
        hemC NONE
        hemD NONE
        hemX NONE
        hemY 3421837 .. 3421850 +  -8.1  -5.49579   CTATGCTTGAGATAG               GCTCC TGCG GGAGC                TTTTCTTTTTTCTGC 100 49
        rhlB NONE
         ppx 3443356 .. 3443373 + -11.3  -4.68424   TTGAGCACGAATGCT             GGCCAGA TGAC TCTGGCC              TTTTTGCATCCGTTC 100 204
        ppiC 3445842 .. 3445858 +  -6.5   -5.8187   GCAGACAATGAAAAA              CCGGC TATTCGC GCCGG              TTTTTTTATTCAGTC 100 57
        ilvY 3448477 .. 3448494 +  -6.9  -3.58037   ACTAAAAACAGAAAA             GGCAGAG TTTC CCCTGCC              TTTAACGAATTAATA  65 47
ND012_RS15655 3459746 .. 3459773 + -17.2  -3.22774   CATAAAGCTCTGATA        TGAAAATGGGGC TCAC GCCCCATTTTCA         TTAATCATCGCTGTC 100 23
        hdfR 3461176 .. 3461196 +  -8.3  -3.14963   GATGCCAATGACCGT            CTTTGCCCA CTA TGGGCAAAC            TTAGCTAATTATCAA  67 142
        trmA 3472992 .. 3473010 + -10.3  -3.66349   TCGACCCAACAAAAA             GGGCAAC ATCAC GTTGCCC             TTGCTTATTTCATTT  82 41
        sthA 3475923 .. 3475936 +  -3.8  -3.14602   TTTCTAAACTGGTAG               CACG GAAATG CGTG                TCTTCATCGGCTCCG  48 265
ND012_RS15745 3477499 .. 3477518 +  -7.8  -5.80817   CAACGTGAAGTATTT            TGGTAGGC CTCG GCCTACCC             TTTTTTTCTGTTAGG 100 63
ND012_RS15750 3479001 .. 3479033 + -11.4  -4.33274   ATAAGTTTCAATCTT      TAGCAAAACCGGGT CCAAA GCCCGGTTTTGTTG      TTTTCATGATCTGAC 100 37
ND012_RS15755 NONE
ND012_RS15760 3480073 .. 3480084 +  -2.2  -4.38748   AAACTTGATGATCGC                CGTG CCTT TACG                 TTGTTTATTTCTAAC  61 328
        argE 3493802 .. 3493827 +  -4.1  -4.19704   ATTGGAATTGAACGT         GGC-GAGATT CGTAATC AATCTCAGCC         TTTTGGGTGAAATTA  61 226
         ppc 3496702 .. 3496730 +   -11  -3.21726   TACGTTCTTACCGGC       TCGTTCCGCGCCA TCCT TGGCGCGGA-CGC        TTGGCTCTTCTACCG  79 154
ND012_RS15820 3497329 .. 3497364 + -14.1  -4.18197   TAATTGATTTATTGA    GACACAGAACCCACT CTAATC GGCGGGTTCTGTGTC     TTTTCGCTACGGCCT 100 38
ND012_RS15840 3501624 .. 3501644 +  -4.7  -5.80003   CTCAAAAATAAAAAA           CCCGC-GT TCTATT ACTGCGGG            TTTTTTATTTATTGA  95 51
ND012_RS15845 NONE
ND012_RS15850 3503834 .. 3503857 +  -8.8   -3.0517   TTGAACAATGTTTGT          GCCCCGTC CAGTGTAC GGCGGGGC           CTTTATGTCATAAGT  68 37
         rph 3508853 .. 3508870 +  -8.4  -5.24531   CAATAATTTTATTAG             GGCGAC GAAATA GTCGCC              TTTTTTATGCCCGGT 100 35
        pyrE 3509814 .. 3509827 +  -9.5  -4.92239   GTCATTAACCTCAAA               GGGCC TAAC GGCCC                TTTTTGCATTTTTGG 100 237
        radC 3513097 .. 3513111 +  -6.4  -3.76373   TAGAGATATTTTCTC               GATCCT TTC GGGATC               TTTAGCTGTTCGGGA  65 38
        rpmB NONE
        rpmG 3513782 .. 3513797 + -11.8  -5.60689   GTGGATTATTAAAAA              CCCGGC CTCG GCCGGG               TTTTTTGTTATATAA 100 46
        mutM 3514720 .. 3514731 +  -5.8  -4.25256   AGTAATATCACCGCC                GTGG CGCG CCAC                 TTCTTTTACTAGAGA  69 91
         kbl NONE
         tdh 3523307 .. 3523329 +  -9.9  -5.52986   CCGTTAGTGAGCCAA          TGCCGGG-GA ATAA TCACCCGGCA           TTTTTTTACTCAGCT 100 61
ND012_RS15975 NONE
        grxC NONE
        secB NONE
        gpsA 3529908 .. 3529940 +  -9.9  -4.08706   AGGATTAATGCGTAC      TAAGTCACCTTGAGG TTC CCTTGGGGTGGCTTG      TTTATGTCATAGGGA  88 46
        cysE 3530943 .. 3530954 +  -2.2  -5.21709   GACTATTCGGTTGCA                TCGG AATC CTGA                 TTTTTTGCTGTGCAG  76 181
        cpxP 3534242 .. 3534260 + -14.6  -6.06529   CATCCCTGTCTTTTC             GCCCTCCA TGA TGGAGGGC             TTTTTTTTATCTGTA 100 83
        fieF 3535207 .. 3535218 +    -3  -2.90813   AAAGCGCGTCATGCG                CATT GGGA AATG                 TAATTTCACACCGTC  44 11
        pfkA 3536440 .. 3536463 +  -4.5  -4.87318   TTCTTGCCTGAAAAA          GCCTCCG TTCACATTTC CGGGGGC           TTTTTGCATTTTAGG  74 48
ND012_RS16030 3537620 .. 3537633 +  -9.5  -4.74706   TTAGGCCATAAAAAA               CCCCG TTGC CGGGG                TTTTTGCGTGTTACG 100 53
ND012_RS16045 3539770 .. 3539786 +  -6.5  -5.06451   GAAAAAATAAGAATA              GGGCG CAGGCCA CGCCC              TTTTTTACGCTGGTA  84 47
        emrD 3542353 .. 3542365 +  -4.8  -3.20361   TATCGTCTAGATGCA                GCAC CTTGC GTGC                TTCAATTCCCATTTT  50 302
        zapB 3546505 .. 3546524 + -12.2  -3.95153   GATGTCATAGCAAAA            GGGCGATA TCAA TATCGCCC             TTTCTACGTGGTTCG 100 77
        rpmE 3555089 .. 3555103 + -11.4  -5.25893   CCGTCAGACGAAAAA               GGTGCC TTT GGCACC               TTTTTTCATGTCTGT 100 49
        metB NONE
ND012_RS16130 3559587 .. 3559633 + -12.7  -5.46657   GCTTTAGGCCGTTGT TATCATTATTGATGCCAGA-GA GATA TCATTTGGCATCAATAATGATC TTTTTTCTTAAAATA 100 34
ND012_RS16150 3564342 .. 3564354 +  -3.4  -3.09491   GCAGGGGATCACTAC                GACA GGATA TGTC                TTGGCTGAATGTATC  46 191
        pdeR 3566751 .. 3566775 +  -4.2  -4.64676   CCCCACTCCATATAA          GCTGCTCTGC AACTC GCATACCAGC          TTTTCTTGCCACTAA  68 341
ND012_RS16165 3568900 .. 3568931 + -17.5  -3.65046   ATGCTTTAGGTGGAA      GTTAGGCTCTTGG ATCACG CCAAGAGCCTAAC       TTCTTAAACTAAAAA 100 32
ND012_RS16175 3569794 .. 3569806 +  -2.7  -3.38326   TGTCTCTTATCTTTG                CGTAA AAA TTATG                TTGCTTAGCGTTCTC  46 204
ND012_RS16180 3570686 .. 3570699 +  -5.2  -4.13014   GCCAACTGATGAAAG               GGCG TGTTTT CGCC                TTTTGAAACTGTAGA  64 290
         gmk 3573073 .. 3573088 +  -3.3  -2.78816   CAAATTATTGGCAGA              CTGAA CAGAGT TTCAG               TATCATGCCCAGTCA  43 22
        rpoZ 3573418 .. 3573428 +  -5.4  -2.61374   TTAATTTAGTCACTA                 GACT GTG AGTC                 TGCCTTGTACCTGTT  49 37
        spoT NONE
        trmH NONE
        recG 3578320 .. 3578355 +  -3.4  -2.62026   CCAACGCTTAAAAAA   C-GATA-GGGAAAGCC TAGACT GGCTTTCCCTTAACCG    ATTGATGTTAACCTG  42 30
ND012_RS16220 3581249 .. 3581273 +  -9.2  -5.48063   GTATCAACACTCAAT          GGCTGGCGCT TTCTT GGCTCCAGCC          TTTTTTATCTTCGAT 100 54
ND012_RS16225 3583051 .. 3583065 +  -2.7  -2.87931   AGTCAGTGACGTCAC               GAGCC ACTGA GGCGC               TCTCTGCAACATAGG  42 16
        glnA 3590115 .. 3590132 + -11.3  -5.26316   CCGTGGAAACTTTTG             GCCCATC TTAC GATGGGC              TTTTTTCTCCACTGA 100 135
        glnL NONE
        glnG NONE
        yihA 3596238 .. 3596264 + -11.7   -2.6127   GCAGGCACTTTTCTA         TGGGCGATAAC ATCAG GTTATCGTCCA         GTATCTTTACTTCTA  80 59
        mobA NONE
        mobB 3603487 .. 3603508 + -12.9  -3.81089   CTGAAAACGCCAAAA           GCCCCCGGC GCAA GCAGGGGGC            TTCTTCATCTCTGTC 100 181
ND012_RS16335 3610562 .. 3610583 +  -9.5  -3.07256   TGGTAAAGACCGCTT           CTGGCGGTTG TGG CAA-CGCCAG           TAATTGTTTCATTGC  69 473
        ravA NONE
        viaA 3621804 .. 3621821 +  -9.1  -3.09635   ATAAAAAAGAAACAA             CCCGACG ATGA TGTCGGG              TTGCCTGATAAAACT  69 296
        asnC NONE
        mioC 3624262 .. 3624281 +  -5.1  -4.32402   AAGATCTAATAAAGA            GATCTTT AAATAA AAAGATC             TTCTTTTAATTAAGG  68 275
        mnmG 3626321 .. 3626343 + -10.6  -3.20236   TTTGGTTCCCCGCTG           ACAGCCAACT GAT AGTTGGCTGA           TTAACTATTCGATTA  77 62
        rsmG 3627301 .. 3627315 +  -2.2  -4.10188   GGTAGATAAGTTGTT               TTAGAA AGG TTTTAA               TTTAATATTTTGATT  55 303
        atpI NONE
        atpB NONE
        atpE 3629207 .. 3629217 +  -5.4  -2.63596   GCTGTCGCGTAAGTA                 GAGA TTT TCTC                 TACTGTGAACTACAC  49 29
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 3632746 .. 3632764 +  -4.5  -2.72263   GGAACTCACCGAGAT            CGTCGGGG GAGC CTCCG-CG             GTTTAACCAGGCTAT  48 1
        atpD NONE
ND012_RS16455 3634804 .. 3634829 + -10.5  -5.64321   TATAGAGTAATAAGG         TGCCAGTTAGT GAAA GCTGACTGGCA          TTTTTCTTTTCTTCT 100 76
        glmU 3636696 .. 3636724 + -13.3  -2.84218   AAAATCTGATTGATA        TCCTTTCATGGTG TCA TGCCATGAAAGGA        ATGTTTTGCTCGGTG  93 32
        glmS 3638770 .. 3638795 +  -7.7  -5.55664   ATATTGCGCTAAAAA         TAGTCCGTTAT GAAA ATAATGGGCTA          TTTTTTTAATGGTAG 100 79
        pstS NONE
        pstC NONE
        pstA 3642114 .. 3642129 +  -6.8  -3.05384   CCAAATTCAAAAAAG              CGTAGC TTAG GCTGCG               TTGGCTAAAAGAGAG  58 49
        pstB 3642976 .. 3642988 +  -5.5  -4.55128   CTGTAGATTTGCCTG                GCTGA AAG TCGGC                TTTTGGTTTAGGCAT  70 72
        phoU 3643800 .. 3643818 +  -8.8  -4.66609   AAAATAATTTCTAAT             GCCCGG TTTTTTT CCGGGC             TTTTTCCCTCCGCTC 100 34
ND012_RS16495 3644860 .. 3644886 + -10.9  -3.81557   CTTAAACGGTTAAAA         CCCCTGCATTG CCAGC CAATGTGGGGG         TGTTTGTTTGAAGGA  88 62
ND012_RS16500 3646067 .. 3646081 +  -3.5  -4.13648   GGCGGTCGGCGAAGG               CCAGT GGCAG GCTGG               TTTATCTCTGGGGTT  60 401
ND012_RS16510 3648134 .. 3648164 + -19.8  -4.54727   GCCTAATGGTCATCA       CGGCCACCGCATCG ACC TGATGTGGTGGCCG       TTTTCCTTTCCAGGC 100 54
ND012_RS16515 3650246 .. 3650267 +  -8.8   -5.4756   GTAATTTGTTTTAAA           TCCCTTCT CTAAAC AGAAGGGA            TTTTTTATTGCCGTT 100 55
ND012_RS16520 3651392 .. 3651424 + -10.8  -2.55484   ATAAATAAATAGTTA      ATCTTGGCTTTTAT CATGA ATAAAAGCCAAGAG      ATATTCTGGGTACTT  76 33
ND012_RS16525 NONE
ND012_RS16530 3654691 .. 3654704 +  -2.5  -2.79158   AGAGAATTGTCACGA               TTAAA AGGA TTTAA                GTATGTTTTTGTTAG  42 22
ND012_RS16535 3655782 .. 3655799 + -12.7  -2.68434   TTTTTATGCTGTGTA             GCGCCTC AAGT GAGGCGC              TAATATGATGTAAAA  88 174
        rpmH 3659501 .. 3659523 -  -2.1  -2.66272   CCCTAGGGAAAGCGA          GCTTAACC-AC TCA GTCGGTTA-GC          TTTATTACTTAGAAA  40 30
        rnpA NONE
        yidD NONE
        yidC 3657229 .. 3657258 - -10.7  -4.73388   AATTTCTACTAAAAA       GAATAAGGCGGTC AATT GACCGCCTTAGGC        TATTAATACAGATGA 100 54
        mnmE 3655376 .. 3655403 -  -9.2  -3.00017   GTGAAATGCAAAGGA        CCCGCTCAGGCAA GTA TTACCTG-GCAGG        GTGGTGATACCAATG  66 439
        asnA 3621797 .. 3621828 -  -7.3  -5.63517   GGTTTAAATAAAAAA      GAAACAACCCGAC GATGAT GTCGGGTTGCCTG       ATAAAACTATCGGGT 100 55
         kup 3616203 .. 3616216 -  -6.7  -3.01712   TTTTTTGCTCCAACA               GCGAA ACGT TTCGC                TGACTAAGAGTTTAG  58 211
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB NONE
        rbsK NONE
        rbsR 3609846 .. 3609858 -  -7.7  -3.58037   TATTAATGGCTGAAA                TGCAG GCG CTGCA                TGATGAATTTGACCG  66 433
ND012_RS16330 NONE
ND012_RS16325 3607049 .. 3607086 - -10.9  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTT GTTA AAGTCATCTTTAAGATA    TTCAGGTGATAATGT  83 59
ND012_RS16320 3603839 .. 3603849 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 30
         rrf 3603591 .. 3603611 - -10.4  -4.84527   CGCACATAGCAAAAA            CCCCACGC TTTGG GCATGGGG            TTTCGGCTTGATTTG 100 43
ND012_RS16300 3601780 .. 3601793 -  -3.1  -4.93898   ATATCATTAGAAAAA               TAACG TCGA CGCTA                AGTCCCATTACTGAT  71 33
ND012_RS16295 NONE
        dsbA 3600042 .. 3600055 -  -9.5  -5.42259   TTATCCGTAAAAAAA               CCGGC CGAA GCCGG                TTTATTATCACTGCG 100 47
        polA 3596372 .. 3596398 - -18.1  -5.24531   AGCGCCCATAAAAAA         CGCCCCAGTCA ATAAA TGACTGGGGCG         GCTAAATATTCAGCC 100 247
        yihI NONE
        hemN 3592379 .. 3592389 -  -2.4  -3.66256   GACAGTTGGAAAATA                 CCTG TCG CTGG                 CTAACGGTCATGGCG  50 388
        typA 3586308 .. 3586339 - -10.3  -6.01369   GAAAGAAGAAAAAAA      GA-ACTCAGGGCGA GAATG TCGCCCTAAGTGTC      TGTTATAGCTTAAAA 100 45
        yihX 3585574 .. 3585597 -  -9.7  -3.80551   CAAATACCGAGGAAA          GGGTTAACA TTAAGG TGTTAACCC           GTGATCTCATTAGGA  84 35
ND012_RS16240 NONE
         dtd 3584196 .. 3584207 -  -2.2  -3.60296   TATTTTCACCCTAAA                CCTG CAAC CAGA                 ATGTCACTGGACCAT  49 9
        fabY 3582963 .. 3582976 -  -3.1  -4.08767   GCCACGCCTTTAAAA               GCTCAC TGA GTG-GC               ACGTTAAAGGCGACA  56 237
        gltS 3578325 .. 3578348 - -12.5  -3.25177   GCTTAAAAAACGATA          GGGAAAGCC TAGACT GGCTTTCCC           TTAACCGATTGATGT  95 40
        ligB 3570407 .. 3570423 -  -2.3  -3.47029   GTATTCAAATATGAA              CATCA GGACCAT TGATG              CTATACAAACAATAG  47 55
ND012_RS16170 3568904 .. 3568927 - -12.5  -2.53263   TTTAGGTGGAAGTTA          GGCTCTTGG ATCACG CCAAGAGCC           TAACTTCTTAAACTA  86 38
ND012_RS16160 3565971 .. 3565987 -  -2.1  -4.37092   ACTGCTTTTATAAAA              TCACTGG AAT CCTGTGG              CATACAGTCAAGCCC  61 475
ND012_RS16145 3561154 .. 3561208 - -10.8  -4.62069   TGCGTACTTTAAAAA CTCTTGGCACTTCCCAGCGATAACTG GGG CAGTTATTACCGGAAAATGCCGAAGG ATAACCCTCTAACTG 100 342
ND012_RS16135 3559276 .. 3559286 -    -4  -3.14132   GGCTCTGTCGATCAA                 TTCT TTG AGAA                 TGGCGAAGCGTTGAA  48 392
        metJ 3555089 .. 3555103 - -11.4   -4.8048   CCGTCAGACGAAAAA               GGTGCC TTT GGCACC               TTTTTTCATGTCTGT 100 237
        priA 3552236 .. 3552246 -  -3.2  -3.60627   TTATCGCAGGTTAAA                 CAGA TAT TCCG                 AACGATGCGGTGACA  51 231
        cytR NONE
        ftsN 3550099 .. 3550133 - -18.1  -2.77182   TTGCAGACGGAATGA    GTCCCCGTCTTGTGTT GTTC AACACAAGACGGGG-C     ATATTGAAGTTATAA 100 62
        hslV NONE
        hslU 3548140 .. 3548162 -  -9.1  -4.82901   TGCTGGCGACAAAAA           GTGGGAGGC GAGAT GCCTCCTAC           TTTTATTGATCATAG 100 60
ND012_RS16085 3547128 .. 3547164 - -13.2  -2.76737   CATCAATTGTCAAAT    TTCGCCAATCCGCA GAATTTGGG TACGGATTGGCGAA    TAAAGTGTGGTGCTA  91 38
        rraA 3546505 .. 3546524 - -12.2  -4.35116   GATGTCATAGCAAAA            GGGCGATA TCAA TATCGCCC             TTTCTACGTGGTTCG 100 63
ND012_RS16070 NONE
        glpK 3543241 .. 3543269 -  -9.5  -4.68612   AAAGAAAGGATAAAA        GCGCGCTGCCA GGGGGAG CGGCAGCGCGT        GATATTGAGATGATA 100 41
        glpX 3542102 .. 3542130 - -13.2   -3.4252   GGTGAGTGAGTATAA        TTGTGGGTGCGC AACCA GAGCACCCACAA        TATCGATCAATTACA 100 36
         fpr 3539762 .. 3539793 -  -3.8  -5.01732   AATCTTGTGAAAAAA      TAAGAATAGGGCGCA GGC CACGCCCTTTT-TTA      CGCTGGTATCCAGCG  73 53
ND012_RS16040 3538473 .. 3538487 -  -7.8  -3.03309   GGTCAATAATAATGA               CTGCCA GAG CGGCAG               TTTACCTGCCCAACA  62 97
        tpiA 3537620 .. 3537633 -  -9.5  -5.26316   TTAGGCCATAAAAAA               CCCCG TTGC CGGGG                TTTTTGCGTGTTACG 100 54
        cpxR NONE
        cpxA 3531343 .. 3531355 -  -3.3    -3.254   GAGGGACGCAGAATA                CCAGA AAC TCAGG                GTTGGTGCAGTGGAC  47 116
        trmL 3530799 .. 3530812 -  -5.2  -3.36569   TTAATTCCTGAAATA               GGCC GAATGG GGCC                ACGGGTGCCCCTTTC  55 52
        gpmM NONE
        envC NONE
ND012_RS15960 3523307 .. 3523329 -  -9.9  -3.07816   CCGTTAGTGAGCCAA          TGCCGGG-GA ATAA TCACCCGGCA           TTTTTTTACTCAGCT  74 31
        rfaD 3519863 .. 3519880 -  -3.5  -2.80344   CTTGCAGCGAATAAC             CTAAATC GGGC GATTTAA              CCAGGCCAGATACTC  45 8
        rfaF NONE
        rfaC 3517773 .. 3517785 -  -3.3  -3.08991   AGCTGCGCAACAAAG                GCTGC TGC GCAGA                GGGGAAAGGCATCGT  46 41
        waaA NONE
ND012_RS15925 NONE
        coaD 3514612 .. 3514648 -  -5.8   -3.1207   CGAAAGTGCAAGACA   CGGGCAG-CGCAGCACA TTTT TTTGCCGCAACTGCCAG    CACTGAATTTAGAGT  55 34
       coaBC NONE
         dut NONE
        slmA 3509708 .. 3509734 - -14.5  -3.79071   GGTAGAAGAGTCAAA        CG-TCCGCGCCA GGGA TGGCGCGGAACG         AGCCGACAAGGACGT 100 142
ND012_RS15870 3506969 .. 3507019 - -14.9   -5.0538   CTCGACCTCAAAAAA TTGGGGAGTACAATCTCGCTAAA CAAAC TATAGCGAGAAAATACTCCCCAA TCTACTACCCATAAC 100 143
ND012_RS15865 NONE
ND012_RS15860 NONE
ND012_RS15855 3503430 .. 3503442 -  -2.7  -3.66356   ACGTGCAACGTTAAA                GCTTA TGG TAAAC                GGTAGATCAAGACGT  51 443
ND012_RS15835 NONE
ND012_RS15830 3498389 .. 3498402 -  -5.3  -3.61268   GAGTCAATGCCTAAA               TCAGT GTAG ACTGA                ATAGACCCCAGTTTC  59 41
        metF 3497189 .. 3497204 -  -4.7  -5.60993   TGTTTGATAAAAAAA              TGGCT CCTATC AGCCA               ATTTATGACCGCAAT  93 192
        argC 3491202 .. 3491224 -  -2.1  -2.75844   TCTTTTATGGCAAAT          TTCGCAACCA TCCC TGGTTA-GAA           TAGAGCCTGAGTTTC  41 20
        argB NONE
ND012_RS15795 3489056 .. 3489067 -  -3.6  -3.25942   ATGGGCGCAGACTAA                GCCG CACC CGAC                 AAATCACAACATTAC  49 37
        argH 3487573 .. 3487596 - -14.6  -3.96327   ATTCTTCATGATAAA          GCGGATGGCA GAAA TGCCACCCGC           AACGCGGAGGGAATC 100 43
ND012_RS15785 3484763 .. 3484774 -    -3   -4.1964   CTGAAGACTTTAAAA                TTTG TATT CAAA                 GCCCCCCTGGATAGT  58 8
ND012_RS15780 3483980 .. 3484018 -  -2.5   -4.3129   CAGCGACCAGTAAAA   TCACCACCACACC CGGTGTTCCTATT GATGCAGTGGTGA   ACTTTCTATGCGGCT  59 69
ND012_RS15775 NONE
ND012_RS15770 3480726 .. 3480739 -  -3.1  -3.34895   TTTATTTTCAATCAA               TGACA TAAC TGCCA                TTGAGTAACCCGCCA  47 42
ND012_RS15765 3479577 .. 3479591 -  -8.5  -3.34962   CCCTAGACGGCATAA               CGGCG CTGGT CGCCG               ATGTCTTGGCAGAAA  66 291
        oxyR 3475352 .. 3475378 -  -5.3  -2.62616   CCATTCCTGAGATCA        GTT-CTG-TCGGT AAA ACCGAACAGGAAC        TGACAGCGATGAAAG  48 313
        fabR NONE
ND012_RS15725 3472992 .. 3473010 -   -11  -5.10461   TCGACCCAACAAAAA             GGGCAACA TCA CGTTGCCC             TTGCTTATTTCATTT 100 58
        btuB NONE
        murI 3468739 .. 3468749 -  -5.4  -3.08046   TTTTTAGGCGAAAAC                 CGAT TAA ATCG                 CTAGTTTTTTCAGCG  53 18
ND012_RS15705 3466667 .. 3466690 -  -5.2  -3.81929   CAACAAGGTACTAAA          GCCCGACCAA TTTC TCAGTCCGGC           CTTATTTGCTCGTTA  61 90
ND012_RS15700 3466527 .. 3466544 -  -2.7  -2.66291   CACACAGTGACATGA             CGTTGAT GGTG ATAAACG              AATGCCGCTGCAACG  41 57
ND012_RS15695 3466330 .. 3466378 -  -5.6  -3.45839   ATTGTTAAAGAGCAA TATTTCACAACACACTACTCACC TTGC GGT-AGCAATACGTTTTGAAATA GTTTTTTTATATGGT  59 37
ND012_RS15690 3463120 .. 3463130 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 30
         rrf NONE
ND012_RS15680 3462696 .. 3462723 - -12.9  -3.08349   AAATAACGCTTAACA        TTATGCCTGCT AAGATA AGCAGGCATAA         TTTAGATAAGTGGCG  95 36
ND012_RS15675 3462576 .. 3462595 - -11.4  -5.96894   ACGCAAATAAAAAAA            CCCCTCGC TTTC GCGAAGGG             TCATTTATATGGCAG 100 35
ND012_RS15660 3459752 .. 3459767 - -10.4  -4.34402   GCTCTGATATGAAAA              TGGGGC TCAC GCCCCA               TTTTCATTAATCATC 100 32
        ilvL 3457671 .. 3457694 - -13.8  -5.45652   ACGGCCAATAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TTTTCTTGAGATTAA 100 51
        ilvG NONE
        ilvM NONE
ND012_RS15635 NONE
        ilvD NONE
        ilvA 3451207 .. 3451225 - -11.7  -4.73105   AGTCACAAAAAATAA             GGGAGGC GATTA GCCTCCC             GATAATAGACATTGG 100 46
ND012_RS15620 3448477 .. 3448494 -  -9.1  -5.00027   ACTAAAAACAGAAAA             GGCAGAG TTTC CCCTGCC              TTTAACGAATTAATA 100 56
        ilvC 3445842 .. 3445858 -  -6.5  -4.96646   GCAGACAATGAAAAA              CCGGC TATTCGC GCCGG              TTTTTTTATTCAGTC  84 88
         rep 3443017 .. 3443038 -  -5.7  -2.78384   GCCGCCGGGATGATA           CGTTGCCTG CAGT CAGGCTGCG            CGCCAACGGCGATAC  52 307
        trxA 3439638 .. 3439654 -  -2.1  -3.33922   AGCTTGCGCAAAAAT              CGCACTC AAC GACGGCG              TTAGATTGAAGGTAC  45 313
         rho 3438206 .. 3438225 - -10.7  -4.70879   TCCAAACGTGAAAAA            CGCCACG ACTGAG CGTGGCG             TTTTGTTCGTTTTAT 100 46
        wecA NONE
        wzzE 3435745 .. 3435763 -  -5.2  -3.06796   TTTTAGGTCAGTTAA             CCGCAGAC AAA GCCTGCAA             GTTGGGCGCTTATGC  52 54
        wecB NONE
        wecC NONE
        rffG 3432197 .. 3432223 - -11.7  -3.63991   TATGACCTGCAACAA        CGCGCTG-TTCA AAAC TGAAGCAGCGCG         TTCGATGGTCTTGCA  90 68
        rfbA NONE
        rffC NONE
        rffA NONE
        wzxE NONE
ND012_RS15530 NONE
        wzyE NONE
        rffM 3424852 .. 3424889 -  -3.6    -4.564   AACTGCAAATTAAAA   CCTTATGGAATATAAA AATAAA TTGATATTCCAAAAAG    AAATAAGAAACGATG  65 114
ND012_RS15515 NONE
ND012_RS15510 3422906 .. 3422922 -  -3.7  -2.56596   GGCTCTACCAACTGA              GCTATAG CCA CCATAAC              TTCTTACTACTTTAC  44 92
ND012_RS15505 NONE
ND012_RS15500 NONE
ND012_RS15495 3422558 .. 3422572 -  -9.2   -5.9663   AAAGACGAAAAAAAA               CCCCGC AAT GCGAGG               TTTTCTTCGAAATGT 100 40
ND012_RS15470 3414892 .. 3414911 -  -5.7  -3.37975   ACCCACTACGCAGAA            GGACACA AAACAA CGTGTCC             CTCATTTTGATAAAA  57 44
ND012_RS15460 NONE
        dapF NONE
ND012_RS15450 NONE
        xerC NONE
        yigB 3410921 .. 3410932 -  -7.2  -3.13906   GGTAAGGGAAAACCA                CCGG GTCG CCGG                 AGTGACCGGACGACC  62 82
        uvrD 3408695 .. 3408720 - -11.9   -3.0644   AGCTAACGGGTAATA         TGCGGCAGCAT TCTC ATGTTGCCGCA          CTCAGATTTACACAG  86 33
ND012_RS15425 NONE
ND012_RS15420 3405651 .. 3405672 - -12.3  -5.49729   AACCACGTAAAAAAA           CCGGAGTCC CAAA AGACTCCGG            TTTGACTACCCTGCT 100 104
        corA 3403718 .. 3403746 - -10.3  -3.34715   CACTGTCCTGAAATA        TCATGCCCGTC GATCGGT GTCGGGCATGA        TTAACCCGCCGGCTT  78 39
        pldA 3401128 .. 3401143 - -11.8  -3.05844   TCTTGGATCTGAACA              GGCCGG TTAA CCGGCC               TGTGTATGATTCTGA  86 58
        recQ 3399174 .. 3399185 -  -4.4   -2.6078   ATTAACATGAAGGTA                TTCC GACA GGAA                 ATAAAGAAGAGGAAC  45 110
        rhtC 3398346 .. 3398358 -  -2.7  -3.41913   GGCACATCTAAAAAG                CAATA GCG CATTG                TGCCACAAATTTAAC  48 213
        pldB 3397222 .. 3397232 -  -5.4  -3.82262   AATCGGAAGCAACAA                 CATG ATA CATG                 GCGGTGTTCTAACCT  61 34
        yigL 3396212 .. 3396231 - -12.2  -3.40052   ACAGTGGTAACAACA            GGGCGATA ACAC TATCGCCC             TCAGACTGCTGACAA  89 222
        glpA NONE
        glpB NONE
        glpC 3389091 .. 3389110 -   -15  -3.06261   GGTTAAGCGTTAAGA            GAGCGCGG ATCA CCGCGCTC             TGAATATGCTATGCC 100 34
        tusA 3387208 .. 3387220 -  -6.3  -3.64703   TTTCGTCTACGTAAA                TAGTC AGT GACTA                ACCCTGTATACCTTT  63 23
ND012_RS15315 NONE
ND012_RS15310 3382658 .. 3382674 -  -9.4  -2.81476   ACCCAGCCAAAAGAT              CAGCCG ATCAG CGGCTG              GCAGCAAGTCAGGAT  65 111
        ftsY 3380053 .. 3380063 -  -3.2  -2.72511   CTGACCTGTTCAAAG                 CGAA TCA TCCG                 TATTAATCCTCTCGG  42 28
        ftsE NONE
        ftsX 3378286 .. 3378298 -  -6.3  -4.46212   GCTTTCACCATAAAA                GTTCA ACG TGAAC                CAGAAGTTTTAGTTG  74 176
        rpoH 3377246 .. 3377267 - -10.2  -5.42198   TCGGAAAAAACAAAA           GGGCGATA TCTTAT TATCGCCC            TTTCTGGTGTTTACG 100 52
ND012_RS15275 3375786 .. 3375797 -  -4.4  -2.91199   TAATTTTCAAGGAGA                TCTG ATAT CAGA                 TGGCCTCAAAATCGA  47 166
ND012_RS15270 NONE
ND012_RS15265 3372825 .. 3372835 -  -6.8  -4.14392   TTTTAACTCGGAAAA                 TGCG CAG CGCA                 AAAAACATTTTCCGC  71 486
ND012_RS15255 3371322 .. 3371340 -   -11  -3.43773   CTGGATATGGAAACA             TCCCCCAA AAT CTGGGGGA             TACATTGCGGGTAAA  83 97
        livH NONE
ND012_RS15245 NONE
        livG NONE
        livF 3367042 .. 3367055 -  -3.7  -5.56568   ATAGCAGCAAAAAAA               GCCGG ATTT CAGGC                CGAAATTATGGCGCC  89 524
ND012_RS15200 3360274 .. 3360284 -  -6.8  -3.02511   TCGACCTTGGCAATA                 GCCA TCT TGGC                 AAGCTCTCCACTCCA  55 257
        ugpB 3358341 .. 3358381 -  -5.6  -3.84961   TATTGAAGCATTAAA TCGCGCTC-CCT-CATTGCT ATC ATCAATACAAGAGAGCGCGA TCTTCCCCACATCAG  63 53
        ugpA NONE
        ugpE NONE
ND012_RS15175 NONE
        ugpQ 3354709 .. 3354751 -  -8.4  -3.10622   TAGCGTCAAAATAAT GACTGAGCTAACCGGCAACA AAC CGTCATCAGGTAGCTCAGCC GTTGGCAAAATCCAC  67 20
ND012_RS15160 3353184 .. 3353196 - -10.5  -3.05844   GCGCGGATGGGAATA                GCGGC TTT GCCGC                ACTGGGTGGTGGAAA  76 152
        metE 3349900 .. 3349915 - -11.8  -4.60487   CATCAGCGTGAAAAA              GGGCGC TTAC GCGCCC               TGAGGTTTAATGACA 100 210
         udp 3347863 .. 3347883 - -10.4  -3.65446   GAAGGAAAGAATGAA            CGGGCTAC ATGAA GCAGCCCG            TCACAGGAATTACAG  82 35
ND012_RS15135 3346945 .. 3346968 -  -8.8  -5.09204   AGACCTGAAGAAAAA          GCTGACGGGG AATT CACCGTCAAC           AACATGATATACATC 100 64
ND012_RS15130 3344920 .. 3344947 - -13.5   -5.5074   TAACTCAACAAAAAA        CAAACGGCCGG TGAATG CCGGCCGTTTA         AATTAAGGTTAATGC 100 56
ND012_RS15125 3344300 .. 3344310 -  -6.8  -3.37513   ACATCCCAACAGCAA                 CCGA CAA TCGG                 AGCTACCCTATCCAA  61 28
        rmuC 3342507 .. 3342522 -  -6.1  -2.64747   GGAGTGTACCAGAAC              TGGGG GGAAAG CCCCA               CTTCGCCTAACGTTG  54 94
        ubiE NONE
ND012_RS15110 NONE
        ubiB 3339329 .. 3339339 -  -2.4  -3.14051   TCACCTTTATTAACA                 GGGG TTA CTCC                 AAAGATGGCCGCATT  43 121
        tatA 3339028 .. 3339043 -    -4   -2.8478   AGCAGTTCACTAAAT              CCGATGT CAA ACA-CGG              CTTACACCTGCTCTT  46 27
        tatB NONE
        tatC 3337634 .. 3337652 - -13.1  -2.94337   TATTCCAAAACAGCA             GCCGCCC GAAAA GGGCGGC             TTAAAGGAAACTGGC  95 45
        tatD 3336842 .. 3336854 -  -6.9  -3.57106   CCTAACTCAAACCAA                CCGGA AAA CCCGG                CGAGCGTTTTCAGCA  63 4
        hemB 3335755 .. 3335778 -  -8.9  -3.19656   AAAGCTATTTAGCAA          GGCAAGTGC GATGCA ACACTTGCC           TCATTAGGTATCAGC  69 43
ND012_RS15070 3333807 .. 3333819 -    -2  -2.66257   TTAAAAATGAAAACG                TTGT TAGCG ACAA                ATGTCGCATAGCTCC  40 114
        ubiD NONE
         fre 3331490 .. 3331504 -  -7.1  -4.49958   ACGCTATCAAATAAA               GGCGA AGGCA TCGCC               ATAGATATGCGTTTC  78 2
        pepQ 3326249 .. 3326261 -  -3.3  -3.54475   GCTGGTATGAGATAA                GGCTG CAT CAGGC                CAGATTCAGATCACG  49 20
ND012_RS15040 NONE
        trkH NONE
        hemG 3323195 .. 3323224 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TATGCATTCGAAC CGAA GTTCAAATGTGTA        CTGCTTTGGTCACTC  48 400
ND012_RS15025 3321506 .. 3321529 -  -5.2  -3.81929   CAACAAGGTACTAAA          GCCCGACCAA TTTC TCAGTCCGGC           CTTATTTGCTCGTTA  61 90
ND012_RS15020 3321366 .. 3321383 -  -2.7  -2.66291   CACACAGTGACATGA             CGTTGAT GGTG ATAAACG              AATGCCGCTGCAACG  41 57
ND012_RS15015 3321169 .. 3321217 -  -5.6  -3.45839   ATTGTTAAAGAGCAA TATTTCACAACACACTACTCACC TTGC GGT-AGCAATACGTTTTGAAATA GTTTTTTTATATGGT  59 37
ND012_RS15010 3317959 .. 3317969 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 30
         rrf 3317711 .. 3317731 - -10.4  -4.84527   CGCACATAGCAAAAA            CCCCACGC TTTGG GCATGGGG            TTTCGGCTTGATTTG 100 43
        murB NONE
        birA 3315102 .. 3315122 - -11.2  -3.28878   TGAGAAAATAAACTA            TCGGGAGA TATCG TCTCCCGA            TTTATTTATTAAATA  81 41
ND012_RS14985 3313564 .. 3313574 -  -5.4  -3.14132   TGGTGCCGGCACCAA                 GAGT CGA ACTC                 GGGACCTACTGATTA  53 0
ND012_RS14980 3313346 .. 3313365 -  -2.8   -4.3208   CTGCAGAATCTAAAA            GGAAG-GGC GTG GCCTCTTCA            CTCTTGAAAGGTTTT  59 106
ND012_RS14975 NONE
ND012_RS14970 3313084 .. 3313097 -  -6.7  -2.57468   TTTCACCACATCAAC               CAAGC AAAT GCTTG                CTGAATCCATTACGC  56 75
         tuf 3311813 .. 3311830 - -11.3  -4.93318   CACAACGTAGAAAAA             GGGCATC AAAT GATGCCC              TTTTACCGCATGTCG 100 50
        secE NONE
        nusG 3310623 .. 3310651 - -10.4   -5.2853   CATCTAAAAACAAAA        GGCGCGAAATTA TATTT TAATTCCGCACC        TGATACAAGACTCAA 100 66
        rplK NONE
        rplA 3309065 .. 3309083 - -14.6  -3.14132   TTGCTCCTGGATTAA             CCGGGGAA TAA TTCCCCGG             AACTCACATCACCCA 100 331
        rplJ 3308544 .. 3308554 -  -4.6   -3.1637   ACAGAGGGCGATTAA                 GCCG CTT CAGC                 TTCTTTCTGATCACG  51 11
        rplL 3308042 .. 3308066 - -18.7  -4.64766   CCTACAGCGCAAAAA          GGCTGGTGACT AAA AGTCACCAGCC          ATCAGCCTATAAAGT 100 65
        rpoB 3303705 .. 3303720 -  -2.5  -2.83715   CGTACCACCAGCAGA              CTCCC GGCTGT GAGAG               CCTGCCGTCTGGAGA  42 45
        rpoC 3299354 .. 3299371 - -12.7  -6.30182   TCAGACAAAAAAAAA             CCGCTCC CAAA GGAGCGG              TTTGCAGGTTGGTGA 100 53
        nudC NONE
        hemE NONE
         nfi 3289903 .. 3289916 -  -3.9  -4.07246   GTACCCGAAATTAAA               TCATA TACC TATGA                GAGAAAGCCGCCTCA  58 306
ND012_RS14870 3289109 .. 3289122 -  -4.5  -2.72144   TTATCGTTTGCAAAG               CATCG AGTG CGACG                GATATGCCGATTGAC  48 165
        hupA 3288754 .. 3288766 -  -4.7  -4.99043   GGCGCATAAACAAAA                GGGGC TTT GCCAC                CCCCTCGTTTATTAT  77 60
ND012_RS14860 3287598 .. 3287616 -  -3.8  -3.57144   TTGGCGACCCGGAAA             CACAGC CAATCAT GCTGCG             GATGCGTTCTGATCT  52 501
ND012_RS14845 NONE
ND012_RS14840 3282487 .. 3282524 - -10.9  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTT GTTA AAGTCATCTTTAAGATA    TTCAGGTGATAATGT  83 59
ND012_RS14835 3279277 .. 3279287 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 30
         rrf NONE
ND012_RS14825 NONE
         rrf 3278784 .. 3278803 - -13.6   -5.4251   TTCAGACACAAAAAA            GGCTACCC GTTA GGGTAGCC             TTTTTTGTTTGTTTG 100 43
        metA 3277112 .. 3277134 -  -4.8  -3.31183   AGAAGCTAAAGTGAA           TGGCGGCC TCGATTC AGCCACCA           ATATAGAAAAGAAAT  53 40
        aceB NONE
        aceA 3273774 .. 3273797 - -14.6  -3.86202   TCCCATCACACGAAA          CAGAGCCTGC ATTA GCAGGCTCCG           GTCAACTCTCTCAAG 100 56
        aceK 3271788 .. 3271816 - -14.5  -3.41229   AGATCGGCAGCAGAA        GGGGTTTCCGCGC CCA GCGCGGAGAGCCC        CGGAGTGTACACGCA 100 233
        metH 3266941 .. 3266969 -  -4.5  -4.21194   CGCGATGACGCAAAA       CAGTCTGCCGCC CAAGCC AGCGGC-GACAG        GTGCTTTAATCATTC  63 44
ND012_RS14785 3266344 .. 3266365 - -10.1  -2.91888   AAACTCGTGAAAGTA           GGCACTGCC TGAT GGAAGTGCC            GGTTTTTTGACCCTG  73 80
ND012_RS14765 NONE
ND012_RS14760 NONE
ND012_RS14755 3259857 .. 3259871 -  -5.6  -2.88667   CTCCATAAAAAGTGA               GACAGG CAC CCTGAC               ACTGTGATGCCCGAT  53 57
ND012_RS14750 NONE
ND012_RS14745 NONE
ND012_RS14740 NONE
ND012_RS14735 NONE
ND012_RS14730 NONE
ND012_RS14725 NONE
ND012_RS14720 NONE
ND012_RS14715 NONE
ND012_RS14710 NONE
ND012_RS14705 3248541 .. 3248562 -  -5.1  -2.89421   TGAAGAATTAGTAGA           TGAGCACTA TCCT TAGCGCTCT            CAGTCAAGATTCATT  50 57
ND012_RS14700 NONE
ND012_RS14695 3244781 .. 3244791 -    -4  -3.72695   ATTTTGTTCACTAAA                 CATT GAC AATG                 TATTTATCTATTACT  54 64
ND012_RS14690 3243687 .. 3243703 -  -2.4  -3.21395   AGCCTTCCTATAAGA              TATAAT GAATT ATTATA              TTAATTCCGTCGGGA  43 187
ND012_RS14685 3237126 .. 3237151 -  -4.5  -5.26119   TCTTGAAAAACAAAA         CCGGTGCTGCC TGAT GGAAGTGCCGG          TTTTTTAGTTATTTA  82 63
         pgi 3226057 .. 3226080 - -13.2   -5.1287   TTCAGACCGAAAAAA          GGCCCCTTAC ACCA GTAAGAGGCC           AATTATAATCATGAT 100 65
        psiE 3225305 .. 3225334 -  -4.9   -2.5007   GGAATGCAGCAATAT       CTCAACCCACAGA ATTA CCTGTGGGGCGAC        TTCGCGGCGGCGGCC  46 270
        malK NONE
ND012_RS14630 3218400 .. 3218421 - -15.9  -5.13722   TTCATCAAAACAAAA           CAGCCGTCC CGAA GGACGGCTG            TGTCACTGCTGTTAC 100 37
        malM 3217321 .. 3217338 - -12.7  -5.33848   ATCACAATGAAAAAA             GGTGCGC CACG GCGCACC              AATCATCCAGCCATA 100 59
        ubiC NONE
        ubiA 3215507 .. 3215521 - -11.4  -5.29782   CATAGCGACAAAAAA               GGCCAG ATT CTGGCC               TTTTTTATTGATCGC 100 68
ND012_RS14605 3212416 .. 3212443 -  -6.4  -2.87132   CTGTTTGTTTATACA        GTTTAGCTGT GAGTATAT ACAGCCAAAC         TGCTCTTGGGAACCA  55 107
        lexA 3211419 .. 3211439 -  -2.5  -4.09739   TGAAGCCTGCGAAAA            CCATGAACA TTG CGATCATGA            CCACAGTGTAGTTTC  55 370
        dusA 3209603 .. 3209617 -  -2.9  -2.75514   TAGATAATAATTAAT               CATTT GAATT AAATG               GGAAATATGATTTTT  42 83
        pspG 3208935 .. 3208956 - -10.2  -5.08601   TGACGCCAATAAAAA           TGGGTTCC GTTTCA GGAACCCA            TTTTTATAACGCTTT 100 361
        dnaB NONE
         alr 3205157 .. 3205180 -  -9.6   -5.4505   CGGGGCAATAAAAAA          GCGCGACATCA TAT TG-TGCCGCGC          CCTTCATTAATATAA 100 61
ND012_RS14565 3203710 .. 3203731 - -10.9  -5.54885   AATATCAATAAAAAA           GGAGCGATA TTGC TATCGCCCC            TGATGCGTTTTAACA 100 51
ND012_RS14560 3202979 .. 3202996 -  -4.8  -3.89822   CAGGCACGCCAGAAA             CCGTCGC CGAGT GCG-CGG             CGTCCCACACAGCGC  59 125
        ssb1 3199322 .. 3199339 -  -4.8  -5.15969   GCTGAATGTAAAAAA             CCCAGC TATTAC ACTGGG              TTTGATTGATTTCTA  80 58
ND012_RS14545 3198345 .. 3198368 - -10.4  -2.52234   AGAAAGGGGACGAAT          GACGGAAAAA ATAA CTTTTCCGTC           GCCAATAACCCTCGG  73 86
ND012_RS14540 3196565 .. 3196596 - -16.7  -3.85864   TCAGGATGATAATAA      GGCTAAGGAGAGG CGAACT CCCCTCCTTAGCC       TAGTGATTATCATGC 100 45
ND012_RS14535 3194719 .. 3194746 -   -17  -3.65522   CATTCACGGGAATAA        GCAGGCGGAGCC CGAT AGCTCCGCCCGC         CTAACCGGTTATCAG 100 37
ND012_RS14525 NONE
ND012_RS14520 NONE
ND012_RS14515 3191588 .. 3191603 -  -8.2  -3.75051   GATCAAGGCAAAAGA              CCCGGC TATA ACCGGG               TTGAGATTAATAACC  75 242
ND012_RS14505 3189652 .. 3189675 - -12.4  -4.56597   GGTGTTGTTTAAAAA          GGCGTACTCC ACAC GGAGAACGCC           TTTTTTATTATGAGT 100 203
        csrD 3177370 .. 3177390 -  -3.3  -5.01732   AAGCCCTTGAAAAAA            GACTAAAAA TCC CCTTCAGTC            GATGCATCGAACGGC  71 172
        mreB 3176091 .. 3176139 -  -3.3  -5.18726   CCTCGACAACAAAAA GGAGGCACTAAATCTGATGA GGCAATACTT TCATCTGATCCAGC-CCTCC TTTTGTGGCTGACTA  75 41
        mreC NONE
        mreD NONE
ND012_RS14425 NONE
         rng NONE
        yhdP NONE
ND012_RS14410 NONE
        tldD 3166267 .. 3166293 - -13.8  -3.51329   TACCGCTAATGACAA         TGGCCTTCCC ACCAATG GGGAAGGCCA         GTAACGGTTAAGCCG 100 33
        aaeX NONE
        aaeA NONE
        aaeB NONE
ND012_RS14380 3160290 .. 3160303 -  -8.1  -3.62275   ATTGATTAGGTTAAA               GCGTC GGCT GACGC                TCATTAGCGCCAACC  70 52
ND012_RS14375 NONE
ND012_RS14370 3159377 .. 3159391 -  -2.8  -4.99043   TGCCCAGAAAGAAAA               GGCT GCCAATA AGCC               ACCGAAAGCATTCCG  71 128
        pmbA 3157295 .. 3157320 -  -9.7  -4.91511   ATTTGAGCATAAAAA         TGGCTAGGGAC AATT GCCACTAGCCA          TTTAAATCATTTGTG 100 90
        cybC 3156743 .. 3156769 -  -6.4  -3.91197   CGATAAATCAGTAAA         GGGTGGCAGCTC GAC GAGCTGTTCCCC         TTTTATTCGCCTGGA  67 51
ND012_RS14345 3155050 .. 3155071 -  -6.5  -4.87626   TTTGAATACTAAAAA           TAGGCTGGC AAAC ACCAGCCAA            CGGTGAGAATTCATT  80 138
        treR 3150438 .. 3150451 -  -6.7  -3.09015   TCTACACTTATGGAA               TGGGA ACGT TCCCA                TGCTGTGTTGAAGAT  59 99
        treB 3148876 .. 3148902 -  -3.6  -4.62783   TATTCATTTGAAAAA         TTGCCCCGCCAA ACG TCAACAGGGCAT         CACGCTAATCAAACC  67 34
        treC 3147008 .. 3147036 -   -11  -3.21993   AGGTAGAAGAGTCAA       GCG-TCCGCGCCA ATAA TGGCGCGGAACGA        GCCGACAAGGACGTA  79 171
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB 3133047 .. 3133075 -  -7.4  -5.04868   TTAAACTAAAGAAAA       GCCCCTGCGTCGT GATT ACGT-ACAGGGGC        CAAAATACCGTGATG  89 64
        ibaG NONE
        murA 3131283 .. 3131309 -  -9.5  -5.59534   AATTACAATAAAAAA        GCCAGCC-GGTT AAAG AACCTGACTGGC         TTTTTATTGGAGCGG 100 115
        zapE 3126482 .. 3126498 -  -3.8  -3.96148   TGCTGGCACTATAAA              GTTTTT GGGAA AAAAAC              TTTATTGTAACGTGG  58 208
        rplM NONE
        rpsI 3125464 .. 3125480 - -13.7  -5.64274   TCAGGCATAAAAAAA              CCCGGTG AAA CACCGGG              TTTTTAGCATTAATC 100 62
        sspA NONE
        sspB 3123938 .. 3123961 -   -16  -4.14627   GCTCGACAGAAACAA          CCAGGGCGGC CTAA GCCGCCCTGA           AGAATAATACGCAAA 100 51
ND012_RS14160 3115371 .. 3115383 -  -6.2  -2.63079   GCGGCAGACAATTGA                GCGC GGCCT GCGC                ACAGTGCCCCGGAGT  54 106
        arcB 3112649 .. 3112661 -  -6.3  -3.37053   ACATATTTTAATGAA                TCTTG TAA CAAGA                GCGCTTACATTTGCT  59 167
        elbB NONE
        mtgA 3111043 .. 3111058 - -10.4  -3.73647   GTTACTCAGCAAGAA              GGGCAG TCCG CTGCCC               AGATAGCCAGTAAAG  79 161
        rsmI 3106439 .. 3106451 -  -3.3  -3.05816   CGACTGTCTAGTCAA                CTCCG CGG CGGAT                TATAGTCACATTGAG  44 124
        rnpB 3106029 .. 3106052 - -14.6  -5.28983   CCTAAAAGAGAAAAA          CCCTGTGCGG CAAG CCACACAGGG           TCATCATTTATCGAG 100 37
ND012_RS14110 3105441 .. 3105454 -  -5.2   -4.0098   CGGGAATCCAAACAA               CCGC ACCACA GCGG                CTCACCTGCGGCGAT  64 113
ND012_RS14100 3103413 .. 3103425 -  -3.3  -4.13767   CCGGCTATGGGAAAA                TGGGC GAT GCCTA                TGCAGGAACTCAACA  58 443
        uxaC 3094867 .. 3094891 -   -10  -4.36729   ACCAAGAATTTAAAA         GCGAGAG-GCC AGTT GGCACTCCCGC          TTGGCGTATTACAGC  93 34
ND012_RS14040 NONE
ND012_RS14035 3091711 .. 3091742 -   -16  -3.10939   AAGTGTAAAACGACA      CGCTTACCGCCAGA AATT TCTGGCAGTAAGCA       ACCTGTAAAAATGAA 100 75
ND012_RS14030 3090718 .. 3090732 - -11.4  -3.17051   GTGCCACCATTAATA               TGGCCG GTG CGGCCA               TTACTATTACCGTAC  79 408
        rlmG 3082174 .. 3082199 - -10.5  -4.41616   AGGTCGCGAAATAAA         CAGAACCCCACC CAA AGTGGGGTTC-G         TCAACGGCAGGGGAG 100 66
ND012_RS13990 NONE
ND012_RS13985 3067875 .. 3067885 -  -2.6  -2.66452   ATTTTTATAATCAAC                 TAAT TTC ATTA                 CTTCACCTTTAAATC  41 23
       imm45 3067544 .. 3067567 - -12.4  -4.19735   GGGCTTAAAAGCAAA          GATCCCGGCC TGTT GGCCGGGATT           TGTATTATTCGATGG 100 30
ND012_RS13970 NONE
ND012_RS13965 3063876 .. 3063889 -  -5.3  -4.55128   ATCGTGAAAGCAAAA               GCATT AGCA AATGC                TGGCGTTAGCAAGTG  70 156
ND012_RS13960 3061994 .. 3062014 -  -5.4  -2.80016   CGTGATCATGAACCA           GTGGCGACA TTTA TGCCGCC-C            AAAAAAGCTGTCGAC  50 231
ND012_RS13915 3054551 .. 3054566 -    -4   -5.0133   TATCTGTGCAAAAAA              TTGAGC AGCA ACTCAA               ACAAAATCAAGCACA  77 65
ND012_RS13905 NONE
ND012_RS13900 3052214 .. 3052266 -  -4.2  -4.35091   AAGAGCGAGAAGAAA CTAAGGGGCATGGTTTTGTTATACC TCTA AGTACAATCAATCCA-GCCCCTTGG CAGAAAGACGCCTTG  65 386
ND012_RS13870 3045463 .. 3045473 -    -4  -4.16397   GCTGAAAATAAAACA                 GTTA TTT TAAC                 GAGGGGGTGGGACAG  61 184
ND012_RS13865 NONE
ND012_RS13860 3044154 .. 3044168 -  -5.6  -3.14564   CCATTGCGTCAGCAA               TTGCCG GTG CGGCGA               CATAGTTCAGCCAGA  55 4
ND012_RS13855 NONE
ND012_RS13850 3043120 .. 3043147 - -15.6  -4.80167   GATTAAAAACGAAAA        GGCCATGCTTCC CGAA GGAGGCATGGCC         TGATGTGTAGTGAGG 100 85
        radC 3039366 .. 3039376 -  -3.2   -3.5394   AAACCTCCGTTTAAA                 GCAA ACC CTGC                 TCAGCAAAAGAAACC  49 10
ND012_RS13825 NONE
ND012_RS13820 3038579 .. 3038604 - -10.4  -4.26881   GCCCATAAAAGCAAA         CACGCCTGCC GGGAGT GGCAGGCGCA          TTATGAGATGAATAA 100 89
ND012_RS13815 3037351 .. 3037363 -  -7.7  -4.14511   AACTGTACCCCAAAA                GTTGG ACA CCAAC                TGATTAAGGCGCAGT  76 384
        tsaD 3031541 .. 3031563 -  -2.6  -4.09628   TATTCGAAATAACAA           TGATCGCAGC CCT GCTCAGACCA           CAAAAACCGAATGAC  57 262
        folB 3030270 .. 3030294 -  -8.6  -5.77632   AAAACCACAAAAAAA          CGGCAATGTT GCAGA AACAATGCCG          TTTAAATTCAGTTAA 100 121
        bacA 3029356 .. 3029373 -  -9.1  -5.38958   ACGCAGAAACAAAAA             GCCCTGC AAAT ACAGGGC              CATTTAGGTGAGTCA 100 56
ND012_RS13760 3025451 .. 3025470 -  -3.4   -4.9725   ATTCCTATACAAAAA            CAGCCGGC AAAA GCAGGCTC             AGACGGCTGACAAAC  71 206
        glnE 3022550 .. 3022566 - -10.8  -5.14645   ACAAGGCAAGAAAAA              GGGGCG ATTTA CGCCCC              AGAAACCCATATTAT 100 55
        hldE 3020823 .. 3020853 -  -9.8  -3.74077   GGCCAGATACTCAAA       CAGGTAAACTGGCA AAG CGTCAGTTTACCTA       CGTCCTTATCATAAC  84 54
        ribB 3019008 .. 3019044 -  -2.4   -5.9218   TACACAATAAAAAAA   CCGGG--CTACCTTCCAT TAA ACGGAAAATAAAACCCGG   TGAGTTCAGTCAGTT  90 77
        ygiD 3018007 .. 3018026 -  -7.8  -3.27923   CCGTAATATGATCAA            GGGAAGGC GAAT GTCTTCCC             TTTTTACATCAATAA  66 50
        nudF NONE
ND012_RS13705 NONE
        cpdA NONE
        yqiA NONE
        parE 3009505 .. 3009534 - -10.8  -3.56837   CGCCAAAGATGACAA      CGCCCGGTTCTGCA AAGG TGCAG--CCGGGCG       CGGTTTGGCAGCGAG  83 59
ND012_RS13685 3008402 .. 3008414 -  -3.3   -2.7898   GCCAACATTTAACGA                CGCAG TTT CTTCG                ATAATCGCTGGCCAT  43 120
        parC 3004973 .. 3004985 -  -7.7   -2.6027   TGAAAACCTAATCGA                CGCTA GTA TAGCG                GCTGCGATGCAAAAC  60 210
ND012_RS13670 3004102 .. 3004140 -  -3.1  -4.67011   AACCGTATGCAAAAA   TTTTGCCCACCGACACC ACGGG GATACAGGAGAGCAAAA   CACTAACGACCAGAG  65 98
        ftsP 3002590 .. 3002613 - -13.2  -3.50553   TAAGAGGATTAAATA          CAGGTTCGAC GAAG GCCGAACCTG           ATTAGAGGCAAGTAT 100 40
ND012_RS13660 3000080 .. 3000108 -  -5.1  -3.29874   TGAAAAACAAAGAAT        TGGGCGATCCCGC ACC GCTGGCTCATCCA        TCACCTCAGTGATGG  55 107
ND012_RS13645 2996337 .. 2996393 -  -4.4  -3.62775   AGTATCGCCGAATAA TACGACCAGACGCACCGATCATGTCGC ATTC GCGCGGAGATCGGTGTAT-TGGTCATA CTGGGTTGCTACGTA  54 21
        exbB NONE
        exbD 2992318 .. 2992354 -  -8.7  -2.57721   TAACTGATGAAGGGA    TGACTGGCGCGGCAA TTGTATT TTGTCGCGCCAGCGA    GGTTATTATTGTGCG  66 31
         fes NONE
ND012_RS13535 2974426 .. 2974438 -  -6.2  -2.86151   GCAAGTATCAAGAAT                CCGG TGATT CCGG                TATCTGTCCGTCGAT  55 68
ND012_RS13530 2967191 .. 2967225 -  -8.6  -3.24423   CTCAAGAACAGTTAA     TTATCTGAGGCCGATA AAT CACCGGCCTCAATCAA     TCGGTTTAACCTCCT  69 31
        entS 2961778 .. 2961801 -  -8.8  -3.55444   TGCCCATGGCCTAAA          CGGTCCGTGC ATTA ACACGGATCG           TTACCCACATCGCGG  73 49
ND012_RS13495 NONE
ND012_RS13490 NONE
ND012_RS13485 NONE
        dhbA 2956033 .. 2956049 -  -6.5  -3.19463   CGGATCATCCATCAA              GCTGCCA GCG TGGCACC              ACCATCAACAACGAT  57 5
ND012_RS13475 2954126 .. 2954140 -  -4.2  -5.14985   TTAAACATATAAAAA               TACCCG TAC CGAGCA               GAATCTATTTTTACA  78 409
        tdcB 2952498 .. 2952511 -  -2.5  -3.13899   AATTCCTTATTAAGA               TATTT TACG AAATA                CTGCCTAATCCCGTT  44 16
        tdcC NONE
        tdcD NONE
        pflB 2947495 .. 2947516 - -10.1  -4.55887   GTTGAAAAATAGAAA           GCCCTCCGT CAAA AAGGAGGGC            TTGAGGGCAATATTA 100 38
        pfkB 2946135 .. 2946148 -  -3.1  -4.59109   CACATGGTGGAAAAA               CACCT TATG AAGTG                TTAAAAACTAAATTG  65 170
        trmB NONE
ND012_RS13395 2936355 .. 2936380 - -12.7  -5.06414   TTTCCCTAATAAAAA         TAAAGGCACCA ATAA CGGTGCCTTTA          TTATCAAACAGTGGT 100 54
        glsB 2935360 .. 2935383 -  -2.3  -2.83164   CCACTCATTATGACA          CTGCCAGAG TTTTAG CGCCGACAG           AAGTAGACTGATCCT  41 39
ND012_RS13385 2934250 .. 2934264 -  -4.9  -4.15044   CCGGCCTGGAAGAAA               GCGAG ATCCG CCCGC               AACTGGATCAAGCCA  64 361
ND012_RS13350 2928505 .. 2928522 -  -2.6  -3.56668   TAACACAGAAGAAGA             GACCGC CGACGT GCTGTC              TACCGATGCCGTGCC  49 523
ND012_RS13305 NONE
ND012_RS13300 NONE
ND012_RS13295 2920471 .. 2920484 -  -6.7  -3.01712   CTTTGGTCGCGAACA               CTTCC CTTG GGAAG                CCACTGACAAAGCTG  55 276
        speA 2916372 .. 2916397 -  -9.7  -4.59846   AGGAGATAAAAATAA         CAAGGGCAAAC CGAA GTCTGCCCTAG          GGTAACAACCGATAA 100 53
ND012_RS13280 2915632 .. 2915643 -  -4.4  -3.54027   TCACTAAAAACAAAT                GAAG GCAA CTTC                 CATGACGCTACAGCA  52 317
         tkt 2913476 .. 2913491 -  -8.2  -6.08563   AACAGACAAAAAAAA              GGCCGC AGAA GCGACC               TTTTAACATCGATAT 100 85
         epd NONE
         pgk 2910933 .. 2910952 - -10.6  -3.81539   AGCGAAATAGCGAAA            CGGGCGGC TTAC GCCCCCCG             TCATCTAAATTACTG  86 35
        fbaA 2909718 .. 2909733 -  -8.2  -5.75538   GCTAAAAAAGAAAAA              GGCCCC AACA GGGACC               TTTAAGCGGATGACA 100 52
        mscS 2908580 .. 2908598 -   -16   -3.6608   AGTAGCCGAGTCAAA             GCGGGTCG TTG CGACCCGC             GTAAACTGGATTAAG 100 54
        argO 2907657 .. 2907670 -  -2.4  -4.74801   TAATCTCACTAAAAA               GCAA CTTACT TTGC                AGTTAATTACGCTTA  66 146
ND012_RS13245 2906802 .. 2906830 - -11.8  -2.64803   CCATGCGGAAAGTGA       CTGACGCCC-TGT TATC ACATGGGCGCCAG        GTACTACGGCAGGAT  83 54
        rpiA 2905042 .. 2905067 - -11.9  -3.28552   AAAGGCAAAAATAAT         CGGGATAACGT CGAA ACGCCATCCCG          GTGACCGTATTAGCG  89 35
        serA 2903489 .. 2903534 -  -5.3   -3.9392   GGTTAGGCCAAATAA TCGTGCAGATTTCCCGGAGTC AGAA GACACCGGGAAAATCGGACTA ATACAGCAGACGGGC  63 23
ND012_RS13210 2901401 .. 2901436 -  -5.4  -4.92314   ATCAATCTAGAAAAA    TATCAGCCTGTCGCAGT AAA AC-ACGCCAGGCCGATG    GCGGGTTGTATAACC  78 66
        pepP NONE
        ubiH 2898807 .. 2898834 -    -7   -4.4267   CGTGAAAACTGAAAA        GAGCCGGTCCACC ACG GATGGAA-GGCTC        TAAATGCACGCTTAA  76 37
        ubiI 2897430 .. 2897445 -    -4  -4.28597   ATAATTAACAAATAA              TCAGTA AAGT TACCGA               TGTTATATAACCAAA  63 140
        gcvT 2895973 .. 2895990 -  -4.1  -3.31232   GTTTTTAGATAAAAT             TACAGCG CGAC CGCTTTA              CCCGCTCGCACAAAA  51 7
        gcvH 2895503 .. 2895531 -   -11  -5.58454   GCGATAGCAAAAAAA        CACCCCGATTCA GTGAA TGAAACGGGGCG        GAAGTCTTATTCGTC 100 32
        gcvP 2892523 .. 2892540 - -10.5  -4.68593   CTTACCACGTAAAAA             GGGCCAC TTTC GCGGCCC              TCTATACAGATTTCG 100 49
ND012_RS13170 2891080 .. 2891105 -   -12  -2.82834   CAGGTCATCATGATA         TTTAGAGGCC GGTTCT GGCCTCTAAA          TATCCGATAATTTGC  83 118
        sdhE 2889510 .. 2889527 -  -3.3  -2.64107   GAAACCCGCAGATCA             CATCGCC ACTG GGCCACG              GGCTTTATTTCGTGT  42 5
ND012_RS13155 2888972 .. 2888999 -  -5.7  -3.55444   TCGCTATGCTGGAAA       GCCGTTG-T-GCA ATGC TGCCAGCAACGGC        TCGCCACGCTCAAAC  59 130
        xerD NONE
        dsbC NONE
        recJ 2884877 .. 2884910 -  -4.7  -2.83012   AATTGTATTATTATA     TTTATGGTGCTATATC GGC GA-ATAGCACCATTAG     CCGTAGCATTTAACG  49 58
        prfB NONE
        lysS 2882110 .. 2882125 -  -8.2   -5.1287   TTTAGACGTAAAAAA              GGGCAC CGAA GCGCCC               TCTTATCAATGTCGT 100 46
ND012_RS13120 2881641 .. 2881655 -  -4.2  -3.05596   GATGGTGGTATTTAA               CGATGG GTG CAATCG               CTTCCAGTTTTAATT  47 279
ND012_RS13115 NONE
ND012_RS13110 NONE
ND012_RS13105 NONE
ND012_RS13100 2877894 .. 2877926 -  -6.9  -3.75461   TAAATCGGTAGGAAA      GCCCCGACCTGCC GAATACT GGTACATCGGGGC      GATAACAATGCGGTT  67 59
ND012_RS13095 2875941 .. 2875984 -  -2.7   -3.0161   ACTGATAATAAGAAG GTGGTCATGCTT-ACTTT AATTTTTAA AAAGTCAAACATCACCAC ACCCTCATAAATATT  43 72
ND012_RS13090 NONE
        gspD NONE
        gspE NONE
ND012_RS13075 NONE
        gspG NONE
ND012_RS13065 2869702 .. 2869713 -    -3  -2.81158   ACCAAAATAATTAAC                TCTA AAAC TAGA                 ATGTTCATCAAATAT  43 124
        gspI NONE
        gspJ NONE
ND012_RS13050 NONE
        gspL NONE
ND012_RS13040 2865782 .. 2865792 -    -4  -4.20118   AATAGTCAAAAAATA                 TACT TAA AGTA                 ATGAGTGAGGAGTAA  61 287
ND012_RS13035 NONE
ND012_RS13030 2863808 .. 2863819 -  -5.8   -4.1523   GGGAAGTAGAAATAA                TCCC TGCA GGGA                 AATATTTAGGTGACC  69 251
ND012_RS13015 2861021 .. 2861033 -  -9.1  -3.30338   ATAATCTGGGCACAA                CCAGC TAT GCTGG                CAACCAAAGACAGCA  71 272
        lysA 2858594 .. 2858604 -    -4   -4.2558   TATTCTGTATTAAAA                 CATT TCC AATG                 CAACCAACTCTTCAA  63 9
         aas NONE
        lplT 2853305 .. 2853325 -  -9.7  -4.19238   TCTCCAACGCCAAAA            GGCCGTTGA TAT TAAACGGCC            TTTTGGTTAAAAAAT  88 48
        rppH 2849272 .. 2849293 -  -2.9  -3.24166   ATTGAATTAACTTAA           CCTCTTTTC CGGC GATAAGCGG            GTGGTGTCCGAGGCA  46 0
        ptsP 2846974 .. 2846993 -  -7.8  -3.54488   GTTCTGTAAACAATA            GCGACGAA TATT TCCGCCGC             CCGATGACTATTAAG  68 41
         lgt NONE
        thyA 2845048 .. 2845067 - -10.7  -5.58522   TACAGAAAACAAAAA            CCGGAGC GTTTAG GCTCCGG             TTTGGGGTTAATAAC 100 145
ND012_RS12945 NONE
ND012_RS12940 NONE
ND012_RS12935 NONE
ND012_RS12930 2842790 .. 2842820 -  -9.8  -2.63257   AGCGCATATAATCTA       CTGGTTAATCAGGA GAA TCCTGATTAACCCC       TTTTAGCACGCAGTA  71 101
        recC 2839362 .. 2839373 -    -3  -3.33261   CCTTAACCCTCAGAA                TTTG ATAC CAAA                 TAATTTATATTGCTC  47 41
        ptrA NONE
        recB NONE
        recD 2830882 .. 2830895 -  -8.1   -2.8806   AAATCCGTCCATATA               GGCTC GAGC GAGCC                GTCCGTGGCACCGAT  61 157
        amiC 2827834 .. 2827847 -  -8.1  -3.08679   CTTTCTTACTCAAGA               CACCC ATAT GGGTG                TTTTTTTGTTTCTGG  63 134
        mltA 2826012 .. 2826027 - -11.8  -4.71186   ATTACGAATACAAAA              GCGGCC CGGC GGCCGC               TTGGAGTCATCTGAC 100 62
        tcdA 2824990 .. 2825006 -  -2.2  -4.89009   ATATCGAAGGAAAAA              CAGCGA AAGAA TTGCTG              GCGATCGATCCTTTA  70 156
ND012_RS12860 2822851 .. 2822863 -  -7.7  -3.00022   GGTATGCCAGACATA                GTAGC TAA GCTAC                TGTTTTTTCACTTCC  62 216
ND012_RS12855 2821663 .. 2821681 -  -2.4  -3.07135   TTTTATAAATAATTA             CTGTTGAA AAA TTCAGCAA             CTTAGCATTTTTCAC  43 43
ND012_RS12850 NONE
        rlmM 2819681 .. 2819698 -  -6.3  -4.32034   TTAGCAGTAGCAAAA             TACCCGGC GTT GCCGG-TA             TTGGGGCAAAAACGG  74 469
         syd 2815339 .. 2815349 -    -4  -4.10161   AGATAAAAAAATGAA                 TGTT TAT AACA                 AATTGATTTTATTGA  61 138
ND012_RS12820 NONE
        truC NONE
ND012_RS12810 2813116 .. 2813141 -  -8.4  -5.15634   TATCGGATCAAAAAA         GTGGCG-ACAA GGATA TTGTTCGCCAC         TTTTTTATTTTCACT 100 36
ND012_RS12785 2807925 .. 2807936 -  -2.2  -3.54741   TACTACTTGGCTAAA                CGCGC ATT GC-CG                CCGAGATAACCCGAT  47 1
        rpsB 2806956 .. 2806976 -   -14  -4.04174   CTGTAGATAAGCAAA            GGGGGCCT ATAAA AGGCCCCC            TAACCAACATATTTC 100 81
         tsf 2806011 .. 2806034 - -14.6  -3.74693   CTTGATTGGATGAAA          TGGAACCGCC TGTT GGCGGCTCCA           TTTTTAAGCATTAAG 100 36
        pyrH 2805130 .. 2805161 -  -6.6  -3.53761   CAATTGCTGGTTAAA      GGCG-ACTCAGCGCA CAT TACGCCAAGTTCACC      CTGATTAGAACGGCG  63 42
         frr 2804442 .. 2804467 - -11.1  -5.81032   TAACGGTAAAAAAAA         CAAAGCGCCGC CTAA GCGACGCCCTG          GAACATCTGACCAAA 100 43
        ispC 2802897 .. 2802916 -  -6.4  -5.68039   AAACGCACAAAAAAA            GCCGTG TACTAAAT CACGGC             TTCTTATATGACAGC 100 161
        ispU NONE
        cdsA NONE
        rseP 2799816 .. 2799839 -  -2.3  -2.52464   GTTCTTCCTAACCTA          TCCCCAGCC GTTAAA AGCGGGAGA           AATCATTGAAAAGTG  39 12
        bamA NONE
         skp NONE
        lpxD 2795583 .. 2795623 -  -5.5  -2.93901   ATGCTATCAACGACA CGGCCTGC-T-TTGACCCC AAAAG GAGATCATCATGCAGGCCG CAAATTAGGAACTCT  52 105
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB 2792441 .. 2792468 -  -6.2  -2.75382   TAGTGGATTGAATCA        CGCCCACAGGACA GGG CGTCC-GAGGGCA        TCATAGCTAAGTGTG  55 59
        dnaE NONE
        accA 2787909 .. 2787933 - -16.5   -5.4505   TTTGCCAATAAAAAA          CCCGGAGCCAA ATT TTGACTCCGGG          TTTTTAACTGAAAGA 100 46
ND012_RS12685 NONE
        tilS 2784222 .. 2784240 -  -2.4  -4.26076   TCATTGCCACCAAAA             GTACTGAT TTC ATCACCAC             TCCTCAATATCACTC  58 45
ND012_RS12675 2783873 .. 2783896 -  -4.5  -5.31275   TTCCAGCATAAAAAA          GGGCCGC AATTTAAAAA ACGGCCC           ATTTTTATTGGCTCC  82 49
ND012_RS12660 NONE
        arfB NONE
        nlpE 2781390 .. 2781406 - -10.9  -5.64274   TCAGCGACAAAAAAA              GCCCTAT TAA ATAGGGC              TTTTTATTGCATCGT 100 83
        gmhB 2774610 .. 2774639 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TATGCATTCGAAC CGAA GTTCAAATGTGTA        CTGCTTTGGTCACTC  48 367
ND012_RS12610 NONE
ND012_RS12605 2772723 .. 2772760 - -10.9  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTT GTTA AAGTCATCTTTAAGATA    TTCAGGTGATAATGT  83 59
ND012_RS12600 2769513 .. 2769523 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  82 30
         rrf 2769265 .. 2769285 - -10.4  -4.84527   CGCACATAGCAAAAA            CCCCACGC TTTGG GCATGGGG            TTTCGGCTTGATTTG 100 43
ND012_RS12565 2761138 .. 2761174 - -19.7  -4.40804   CACCATCGGATAAAA    TAAAAGGGACGCTGACA TAT CATCAGCGTCCCTTTTA    TATCGAACAAAGGTT 100 42
         asr 2746372 .. 2746391 - -13.6  -5.58454   GTCACATTAAAAAAA            CACCCGGT AAAA ACCGGGTG             TTGAGGTTTGGCAAA 100 69
ND012_RS12495 2745417 .. 2745467 - -10.5  -3.47762   AACATTTATTAAAGA TGCGACCGATG-AGAATATCGCAC AATG GCGCAATATTCTGCTACGGGCGCA CATTCCGCCAACATT  77 235
ND012_RS12480 2743985 .. 2744000 -  -8.2  -5.69262   TGATAAAAATAAAAA              CCCCGC CGTA GCGAGG               TTTTATGGTCGTTGG 100 133
         mqo 2741569 .. 2741590 - -14.5  -4.62984   GCAGCACATATAAAA           GCCGGAGAA ACAT TTCTCCGGC            TCGTTACTCAGATAT 100 55
ND012_RS12450 NONE
ND012_RS12445 NONE
ND012_RS12440 NONE
ND012_RS12435 NONE
ND012_RS12430 NONE
ND012_RS12425 2727937 .. 2727974 -  -7.8  -2.80195   AGTCATTATCAATTA   CCTCAATTGTCTGTCA TTAAAT TAACAGGCTATTGAGG    TGTCCGGTATTACTG  61 69
ND012_RS12315 2698836 .. 2698848 -  -2.6  -4.72986   CACTGCCATCAAAAA                GGCG TCCAT CACC                AGCTCTGCTGTCATT  64 210
ND012_RS12300 NONE
ND012_RS12295 2695298 .. 2695310 -  -5.5  -3.18507   AAGATAGTCCATGAA                GAGCT GCC AGCCC                TCGAGAAAGGCATGG  52 236
ND012_RS12285 NONE
ND012_RS12280 NONE
ND012_RS12275 NONE
ND012_RS12270 2689818 .. 2689832 -    -5  -2.84098   CCTTGCAATCAATTA               TTGCCA TCC TGACAA               TTCAAATTAGCGCAT  49 103
ND012_RS12265 2689337 .. 2689352 - -10.4  -5.08824   GTGTTAGCCAAAAAA              GCTCCC TTCT GGGAGC               TTTTTTTTTATAAAC 100 44
ND012_RS12245 2686395 .. 2686406 -    -3  -3.92075   ACCCTCATCCATAAA                TTGA GCCA TCAA                 TACTAACTTAACAAC  56 64
ND012_RS12240 2685821 .. 2685839 -  -3.2  -3.43689   AAAATGTTAGCATAA             TTATGTCT AAA AGATATAA             GGCATTCGTTTGGAT  49 56
ND012_RS12235 2684250 .. 2684277 -  -8.6  -4.56775   ATTTCTTTCGAAAAA        GGCACTATAA TCTTAAAT TTATAGTGCC         AGGATTTTGGATTAG  87 475
ND012_RS12200 NONE
ND012_RS12195 2677302 .. 2677322 -  -6.8  -4.83615   GACGGTTGATAAAAA            TATGGCGC GTAAT GCGCCTTA            TTTTTTGGTTTTTTC  82 23
        grpE 2673356 .. 2673372 -  -9.4   -5.4492   GACACAGAGAAAAAA              GGCACC ATAAA GGTGCC              TTCAGACTCGCTGGA 100 46
        grcA 2671872 .. 2671889 -  -9.1  -4.91573   AAAAGACAGTAAAAA             GGGGAAC CGAA GCTCCCC              TTGACGTGATTAACG 100 57
ND012_RS12160 2670688 .. 2670705 -  -3.3  -3.05385   AATACACCACAGATA             GCGTAGC GAAG ACAACGC              AAGCATCTATCTATC  44 50
ND012_RS12155 2669736 .. 2669760 -  -7.2  -4.67353   GCACTCATGCAAAAA         GCCGC-TGAAT TCAC ACTCAAGCGGC          TTTTTTTATGGTGAA  81 244
ND012_RS12145 2667465 .. 2667511 - -10.3  -2.55074   TGCAACCGTAATTTA TCCCTATCACTGCAAGGGCACA CACT TG-ACCCTTGTAGTGATAAGGT CAGTAATGAAGATAA  73 25
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 2662856 .. 2662875 -  -2.8  -2.77182   TTTTATATTCAATTA            GCTATTCA GATC TGATCAGC             GCTGATTTGTTTATT  42 114
        lepA NONE
        lepB 2659558 .. 2659581 -  -3.8  -3.97139   GAACCGCAATAATAA          CGTCAATAAC GTTG GCTATCGTCG           AATTAGTGAATGCCA  58 28
         rnc NONE
         era NONE
        recO 2656935 .. 2656945 -    -4  -3.23219   AATAGCCCTAGAATA                 GATT AAA AATC                 AGTGAATTCAGGAAG  49 33
        pdxJ NONE
        acpS 2655666 .. 2655683 -  -3.3  -4.80417   GATAAAAACAATAAA             GAGCGGA TCAA TACGCCC              GCCCGATCGCCAGTA  68 59
        murQ NONE
ND012_RS12065 NONE
        yfhb 2651087 .. 2651099 -  -3.3  -3.37344   CCGCGAGCGAATTAA                GCCGG CAA CCAAC                ACTGCGGTGGAGTTC  47 56
        tadA 2650332 .. 2650348 - -10.1  -5.59879   GATAAAGAGAAAAAA              GCCGCAC AAC ATGCGGC              GATTGAATCTGAATT 100 104
        purL 2644760 .. 2644775 - -11.8  -4.27465   GATAATCCAAAATAA              GGGGGC ATCA GCCCCC               TCTATCGGTTAACCC 100 34
ND012_RS12035 NONE
        qseG NONE
        glrR NONE
ND012_RS12020 NONE
        glnB 2637209 .. 2637235 -  -9.5  -5.22006   TCAGGATAAGAAAAA        GCCCGTTTCATC TTTT GACGA-ACGGGC         TTTTTAGTCGGCAAC 100 63
ND012_RS11975 2628789 .. 2628805 - -12.3  -5.71712   GTCGACATAAAAAAA              CCCACGT TAA ACGTGGG              TTCTTGTGACATCAA 100 57
ND012_RS11970 2627227 .. 2627250 -  -3.8  -3.42699   ACTGACCCAGCAGAA          TCGGCGTC TGGAAAGT GACGTCGA           GCGACAACTGCGGGA  50 236
ND012_RS11960 NONE
ND012_RS11955 2624381 .. 2624400 -  -7.1  -2.62616   TTATGGCTGAGATCA            GCGTCCA AATGGA CGGACGC             CGCCCATCATGGCTG  58 3
        trmJ 2622583 .. 2622607 - -13.1  -2.89881   TATTTAGGCCATAGA          CAGATATATCA ATA TGATATATCTG          TCTATTCTTTATCTT  91 27
        iscR NONE
ND012_RS11935 NONE
        iscU 2620218 .. 2620238 -  -9.7  -3.33261   CCTCAACTCTGAGAA            CCCACCTGA AGC TCAGGCAGG            TTATTTATACTGATT  76 46
        iscA 2619866 .. 2619878 -  -3.3  -5.28683   ATCAAGAGGAAAAAA                CGCCC GTT AGACG                TTAAAACTCTCGCCA  79 19
        hscB 2619130 .. 2619145 -  -3.2  -2.79718   GAATTTTTAAAAGAT              GCGTTT GGCC AATCGC               TATCATTAGCATTCT  43 83
        hscA NONE
         fdx NONE
        iscX 2616496 .. 2616518 - -13.4  -4.85653   TAGATAGAAAAGAAA           CGGGGCCGCT ATC AGCGACCCCA           GAGATATTTACTCGA 100 33
        pepB 2614973 .. 2614992 -   -15  -4.07306   ATAGCGAACGATAAA            GGGGCACC TACA GGTGCCCC             AGAATAGGCGAGAAT 100 91
        sseB 2613998 .. 2614027 - -10.9  -4.33997   CATTAAAAATAAGAA       TAGGACGGAAACAG TAG CCGTTTCCGTC-TA       TAACGCAGCTTATGC 100 35
ND012_RS11890 2608780 .. 2608790 -  -6.8  -3.06711   TATTCATAAAGGATA                 GAGG TGG CCTC                 TTGATCACTGAAAAC  58 66
        pbpC 2606419 .. 2606430 -  -4.4  -3.40403   CTTTTTTCATTACAA                CAAC TCTA GTTG                 TACATTATTTTAATA  51 30
ND012_RS11880 2603689 .. 2603728 -  -2.2  -3.53343   AATGGGTTCGCTAAA  TGAAGCTACTGCG-CAG TGAGATC CCGCCACACCAGCTTCA  TCTAATCAAAGGCTA  47 65
         ndk 2602877 .. 2602905 - -12.4  -3.37303   GAATAAATAATGGAA       CGCCCCGG-GGAG CAGG CTCATCCGGGGCG        CGGCATTGTACAAAT  95 137
ND012_RS11870 2601566 .. 2601581 -  -7.6  -3.10255   ATAACAGTCAGTTAA              GACGAT TTTT ATCGTC               CTGTAAGGTTCAGAC  63 35
        pilW NONE
        rodZ NONE
        ispG 2598500 .. 2598514 - -12.8  -4.27117   TGGGCACAATATAAA               GCGGGC CTC GCCCGC               TTGCTCAATACCAGT 100 55
        hisS NONE
ND012_RS11845 NONE
        bamB 2595182 .. 2595216 -   -18    -3.224   GAAGTTTTTAGAATA     CGAAACGGCCCCTGAA CTA TTCAGGAGCCGTTTGG     GGACTCATATCAAGA 100 104
         der 2593572 .. 2593604 - -14.1  -3.87075   ACCATCCGCCAGAAA      TGCGAAGGGCGCGGA ATA TCCGCGCCCCTCTAA      CTGACTTTCTTTATT 100 36
ND012_RS11830 2593075 .. 2593086 -  -7.2  -2.81191   AAAAAACGCTTAAAC                CCCG CTCG CGGG                 CGAAATAAGCGTAAC  59 100
        guaB 2589909 .. 2589935 -  -9.5  -2.95933   AAAAAAGAAAACTCA         GTCATCCGGTA GTCGA TACCCGATGAC         CTGCTAGTCAATTCT  71 172
        guaA 2588226 .. 2588246 - -12.7  -6.25578   ATTAAATAAAAAAAA            GCCTTCAAA TAA TTTGAAGGC            CTGATGCAGTAACTA 100 65
ND012_RS11810 NONE
ND012_RS11805 NONE
ND012_RS11800 2585374 .. 2585386 -  -3.3  -4.30995   TTCTCTACAAAAGAA                CGCGG GTA CCACA                CAATAATTATCCATA  61 283
        thiD 2584086 .. 2584115 -  -9.3  -3.06815   ATGTGGTTGAAGATA       TGCAAGGTGAGCG CCGT CTGTCACCTTGCA        TCAGGCCGCGTAAGG  66 164
ND012_RS11785 2582634 .. 2582650 -  -9.4  -3.66356   ATCTTTAACGTGAAA              TGGCGC TTTAT GCGCCA              TCAGGTTAAAGATCA  78 83
ND012_RS11685 NONE
        pstA NONE
        pstB 2548404 .. 2548421 -  -7.7  -3.01712   CTGTCTGGCGGAATA             GGCACTA GCCA TAGCGCC              CGGTAATATAATCCT  62 12
         upp 2544757 .. 2544774 - -11.3  -5.90981   GCAGAGCAAAAAAAA             GCCGACT TCTT AGTCGGC              TATCAACATCATTTA 100 38
        uraA 2543269 .. 2543283 -    -5  -3.15592   AACGGGCAGGAAAAC               CGGTAA AGC TTACCA               CAAAAATCAAAAGCT  51 156
         hda 2542439 .. 2542455 -  -9.3  -3.61178   GTTATTCAGGGGAAA              GCGCGGC TTG GCCGCCC              ACCAGAGCAGGTTCT  71 107
ND012_RS11630 2539141 .. 2539156 - -10.4  -4.81083   TTTAATCAGCAAAAA              GAGCGC CAAA GCGCTC               TTTTTTATGGGTGGC 100 88
        dapA NONE
        bamC 2535947 .. 2535960 -  -9.5  -4.49311   AGCACCATGACAAAA               GGGGC CGAA GCCCC                TTTATTTAGTTTGCG  95 31
ND012_RS11605 2535037 .. 2535061 - -11.5  -2.76743   AATATTAAATAATAG          GGGGGAGAT ACGGGTG ATCTCCCCC          TGCTGTTTAGCATCT  81 66
ND012_RS11600 NONE
ND012_RS11595 NONE
        ypfH 2531261 .. 2531291 -  -9.1  -4.34402   CTTCGCATATCAAAA      GGGCAAAGAC-CGA GTTA TCGCACCTTTGCCC       TGCTTTGTTATCGGT  86 43
ND012_RS11565 2527938 .. 2527959 - -13.1  -2.72461   TAACCTGGGTGAAAC           CAAGGATGC AGTG GCATCCTTG            CTATTATTACTGGCA  81 118
ND012_RS11550 2523252 .. 2523267 - -11.8   -3.2794   CGTCACTGAGATTAA              CCCCGG AAAA CCGGGG               CTACTCAATGGCCGC  89 26
        napF NONE
        napD NONE
        napA 2518622 .. 2518638 -  -2.9  -2.82516   GCCCGCAGTATCAGA              GCCTGCG GGC CACAAAC              CAGCAATCAGGGTTA  42 38
        napB 2518119 .. 2518131 -  -4.7  -3.55444   CGGTTATTTGCCAAA                GCCAG GAG CAGGC                TGGAAGGTATTTTCC  55 1
        napC 2517437 .. 2517464 -   -12  -5.63517   TTTGCAAATAAAAAA        CACCCTGCCAGC CTAC GCTCACAGGGTG         TTTGCAAATAAATTA 100 57
        nudK NONE
        maeB 2514085 .. 2514108 -  -9.6  -5.17353   ATATTGATCAAAAAA          GCCTCTGTCC CACG GAACAAAGGC           TCAGACGGCTGACAA 100 249
ND012_RS11495 2511816 .. 2511854 -  -2.5  -4.03978   AATTTTTGAGATAAA   GGCCAAAATCACC TTATCTATTGCTC GGTCATTTCGGCC   AGTGGTGCTATTGAA  54 91
ND012_RS11490 NONE
ND012_RS11485 2510480 .. 2510499 -  -4.4  -2.57132   TTCTGCCTCTACAAC            TTATATAG GTTT CTATACAA             CACCATGTTTAACCA  45 80
ND012_RS11480 NONE
ND012_RS11475 NONE
ND012_RS11470 2507867 .. 2507895 - -11.9   -3.6422   TATTCTGCGAAAAGA        TGACGCTTTAAAT GCT ATTCAAAGCGCCA        TAATGAATAGAGAAT  85 43
ND012_RS11455 2506483 .. 2506498 -  -5.4  -2.63102   ATTATCGCTACACCA              GCTGAA AACA CTCAGC               CAAAAAGCCAAGCTA  48 179
ND012_RS11445 NONE
ND012_RS11440 NONE
ND012_RS11435 2503283 .. 2503303 -  -2.5  -3.95219   GGGAAAGTGGATAAA            GACTGGAAC TCT GTTGAAGTC            GATGTGAAAAGCATT  52 434
ND012_RS11420 2501881 .. 2501897 - -10.1  -4.49316   ACCATCAATAATAAA              GGCTCCC AAT AGGAGCC              TAGGCAATGTGAGTC 100 60
ND012_RS11415 2500754 .. 2500782 -   -11  -4.67697   GCTGAAAATAATAAA       GGCCGGGTATGCT GAAT AGCG-ACCCGGCC        TGTTTTTTGCATAAT 100 61
ND012_RS11400 2497905 .. 2497915 -    -4  -3.31726   TCCTTCCAGATAATA                 CTAA TCA TTAG                 CCTATGACAGCACCG  51 27
        nanQ 2497338 .. 2497353 - -11.8  -5.66229   AGCAACAATAAAAAA              CCCCGG GGGG CCGGGG               AAAATGTCAAAGATA 100 65
ND012_RS11390 2496157 .. 2496173 -  -6.5   -4.3341   TAAAATCAACACAAA              GAGGAGT AAA ACTCCAC              TTGAGTGTATAAGAT  72 200
ND012_RS11385 2494448 .. 2494469 -   -13   -3.9941   CGCCCCATAAGCAAA           GCCCGGCT GAGATA AGCCGGGC            GGGAAGAAACCGTAT 100 53
ND012_RS11380 NONE
        cysT NONE
        cysW NONE
        cysA 2490267 .. 2490284 - -10.5  -5.25735   GTAAAAAAGTAAAAA             GGCGGCC TGTA GGCCACC              TCAGACTGCTGACAA 100 188
        cysM 2489204 .. 2489219 - -10.4  -5.18726   TGCGGATAAGAAAAA              CGACGC TTCG GCGTCG               TTTTTTATTTATTAG 100 118
        zipA 2483068 .. 2483084 - -10.8   -5.5762   ATCAAAGATAAAAAA              CCCCCG GCATG CGGGGG              TTCGGGTTAATTCGT 100 58
        ligA NONE
ND012_RS11320 2480589 .. 2480604 -  -4.7  -4.68506   AAGGAAGCGGAAAAA              TCGCA ACAAAA TGCGA               GTACCACCAGCCAAA  73 176
ND012_RS11290 NONE
ND012_RS11285 NONE
ND012_RS11280 NONE
ND012_RS11275 NONE
ND012_RS11270 2476450 .. 2476463 -  -9.5  -4.37886   TGACTGTTGATAAAA               GGCGC TGCG GCGCC                TTTTTTATCTCAACG  88 387
ND012_RS11260 2473539 .. 2473574 -  -6.9  -4.32034   TCACGACGATTAAAA   CTG--GCTCCGGCGGTGA GCT TCGCCGCCGG-GCATCAG   ATTCTCGCTATATCA  74 76
ND012_RS11245 2471533 .. 2471555 -  -2.6  -5.31877   ATCGATCACAAAAAA           CGTTTCAGCC GTG GGAAAAAACG           TTTGAGTTGCGTTTT  76 61
         glk 2470396 .. 2470417 -  -7.3  -5.36441   CTGTGACATAAAAAA           CCACGTC GTTAATCT GACGTGG            TTTTTTATTGCTCAT  91 56
        alaC NONE
ND012_RS11210 2462727 .. 2462742 - -11.8  -2.82834   TATTCCAGCATTAGA              GGGCGC AAAT GCGCCC               TTTGTCATTTTATTT  83 35
        mltB 2460453 .. 2460470 -  -9.1  -5.04265   AAAAAAGATCAAAAA             GGGCCAC ATAA GTGACCC              GAAAATAGGATAAAA 100 66
ND012_RS11190 2459612 .. 2459622 -  -5.4  -3.60316   ATGCTTTTAAAAAAC                 GCTT ATT AAGC                 CTTATCAATAAGGTA  59 339
ND012_RS11185 2458313 .. 2458327 -  -7.8  -3.91364   AAACGGATATAACAA               GCCCCT CCT AAGGGC               TAGTTACTGGTTCGA  70 59
        ccmA NONE
        ccmB NONE
ND012_RS11165 NONE
        ccmD NONE
        ccmE NONE
ND012_RS11150 NONE
ND012_RS11145 NONE
ND012_RS11140 NONE
        ccmI NONE
        mlaA 2449567 .. 2449594 - -15.8  -3.37879   ACGAACGCCAACCAA        TAAAAAAGCGCC TTCC GGCGCTTTTTTA         TTTTCAACATTCCCG 100 49
ND012_RS11120 2447254 .. 2447273 - -10.8  -4.60797   TCCTGAGAGATAAAA            TGGCATTC ACCC GAATGCCA             GGTTAACAGGTCTGA 100 254
        fadI NONE
        fadJ 2443636 .. 2443648 -  -2.7  -4.91873   TACAGGAAGCAAAAA                TGCTA AAA TAACA                GGCGGTGATCGCGCT  70 93
        sixA 2442679 .. 2442713 - -12.3  -4.26953   AATTAACCGAATAAA    TTAAGGGCGTG-ACAG AAAA CTGTTCACGCCCTTAT     TGGTGATGCCTTGCC 100 120
        prmB 2440986 .. 2440999 -  -8.1  -3.72241   CAGGAATTACGGAAA               GGCAC CGCG GTGCC                TGCCGCTTAGTCGCG  70 32
        aroC NONE
        mepA NONE
ND012_RS11080 2438158 .. 2438170 -  -4.1  -3.88498   CCCTTACATATGAAA                TGGAA TTA TCCCA                TTAAGTCCGGCAACT  57 39
ND012_RS11075 2437504 .. 2437515 -  -2.2  -3.01745   CTGGCAACAATTAGA                CGAA ATCT TCCG                 GATAAGGGAAGTGCT  42 9
ND012_RS11070 2437137 .. 2437171 - -12.9  -3.92075   ACCCTGAGTGACAAA    TC-GCTGCCGTGGTGC ATTA ACGCCACGGCAGCAGA     AGAACTTAGTGAGCC 100 31
        fabB 2433632 .. 2433656 - -15.1  -5.80817   TCGAAGATAAAAAAA          TCCCGAACTGA AAA TCAGTCCGGGA          TTTGAGTCACTATTG 100 75
        lpxO 2432059 .. 2432084 -  -5.3  -3.04792   CGATTATTGCCAACA         GCGTTTTCAGG CTAG CCCGACCACGC          CGCTGACTCAAACTC  51 363
ND012_RS11045 NONE
ND012_RS11040 NONE
ND012_RS11035 NONE
ND012_RS11030 2427238 .. 2427248 -  -5.4  -2.87051   GCCCTACGATTAAAC                 TTCG CCG CGAA                 TAGTCCTGAATTGAT  49 208
ND012_RS11020 2424134 .. 2424150 -  -6.6  -2.56046   GTAAAGGTGAATTGA              TGATGC TGGCT GCATCA              ATCTCTTACGCCTTG  52 499
ND012_RS11010 2422694 .. 2422707 -  -3.8  -4.13437   CAATGAAAAAGATAA               TGGC TATTTT GCCA                CTGAATGACTCTGAA  60 74
        pdxB 2421463 .. 2421479 - -12.3  -3.77188   ATTCAAATACAAAGA              GGCGGTA AAT TACCGCC              TTGATAATCATCGGT 100 60
ND012_RS11000 2420422 .. 2420435 -  -4.5  -3.81951   TCGGACATCAGTAAA               GCTGC TCCT GCAAC                AGACGCTCAGCCGTT  59 4
        truA 2419562 .. 2419579 -  -4.1  -3.78329   CGCTACCAACTTAAA             GCCA-GCG ATC CACCTGGC             ATCAATCATCGGCTA  57 27
ND012_RS10990 2418668 .. 2418679 -  -5.8  -5.12068   CACACCCAATAAAAA                GTGC CTGA GCAC                 CACACCAACAGGGCG  85 162
        accD 2417639 .. 2417668 -   -13  -2.76815   ACGCGGGGTAATAAT       CGGGTATCACTC GATGAA AAGTGATACCCG        TTGACCCACTTAGTC  91 35
        folC NONE
        dedD 2415399 .. 2415431 - -12.2  -4.55295   CCCCGGATAAATAAA     GTGCGGCGATT-TTA AAAA CAACAATCGCCGCAC      AAACTTAGCTTAATC 100 88
        cvpA 2414793 .. 2414806 -  -2.3  -2.57132   GTCTTTCCTCATAAG               CCGCT CCGA ATCGG                TAATTGATTCGGCAA  40 5
        purF 2413125 .. 2413154 -  -6.5  -5.35459   AGATATGACAAAAAA      GGTGCA-CC-GCG AAAGAA CGCCGGTTGCACC       TTTTTGATTCATTTT  89 129
ND012_RS10960 2412296 .. 2412307 -  -2.2  -4.38129   AGATAACCACTAAAA                TCGA TAAA CCGA                 AAGGCAGCACAGCCT  61 165
        hisJ 2411309 .. 2411336 - -15.6  -3.85698   GCGGGTTGTCAGAAA        CGGCCTCTGCCA ATGC TGGCAGAGGCTG         AGCAACCTGTCGGTT 100 51
ND012_RS10945 NONE
ND012_RS10940 NONE
        hisP 2408576 .. 2408593 -  -5.5  -4.09739   CCAACGCTGGGAAAA             TCTGGCG CTGG CGGCAGA              AAGTCCACAAACCCG  64 494
ND012_RS10920 2406109 .. 2406125 -  -5.7  -3.90318   CTATTACTGCATAAA              CCGAGGC GAC GCCCCTG              TCAGGTCACAAACTG  63 26
        yfcE 2405279 .. 2405295 -  -2.3  -3.13522   ATTTGTTGATCAATA              GTGTTTT TCA AAAACAA              CGTTATAAGTATGTG  43 74
        yfcD 2404615 .. 2404636 -  -7.2  -5.52023   ACCATCAATAAAAAA           GGCGCCGA GAATTA TCGGGGCC            TTTTTATCATTTACT  95 65
ND012_RS10890 2401160 .. 2401179 - -10.7  -4.56597   GGTTTGTTGTAAAAA            CGCCAGC TTTCGC GCTGGCG             TTTTTTATCTGGTCG 100 60
ND012_RS10875 2396806 .. 2396837 -  -2.8  -2.94144   GGTTTAGTGAAAGGA      TTCACCGAGAGTCG CTGC CGCCCCTCGGCTTA       GGGCTGATTTATCGT  43 50
ND012_RS10870 2395808 .. 2395826 -  -5.2  -2.64794   TGGAATCGCATACCA             CCAGCAGC ATG GATGCTGA             TGAGCCTTATTGCGA  48 402
ND012_RS10860 2392863 .. 2392881 -    -3   -4.3739   CACGGTTGGAGAAAA             CCCTCGCG ATG CGCCAAAG             CCCGGAAATGGATTA  62 230
        rovM 2389167 .. 2389192 - -12.7  -4.43307   TTGCTAAGAAAATAA         TAATCCCCTGC TATA ACAGGGGATTA          CGGACGAAGCATGAT 100 55
        nuoA NONE
ND012_RS10835 2387366 .. 2387380 -  -4.3  -3.14132   TCGCTGTCGTACCAA               GATTG GCTGT CAATC               GACAGAATCAAATCT  49 33
        nuoC 2385390 .. 2385406 -  -2.1   -3.6715   GCACTCAATTCGAAA              GCTGCCA TTG TGGTCGC              CGATTCAGCCGCATT  49 106
        nuoE NONE
        nuoF 2383463 .. 2383493 -  -4.1  -3.01712   GCTTGTGGCTGAACA       GAGTCAATGTC TGTCACCGC GACATTGAATC       GGTTGGTTTACAAGC  47 89
        nuoG 2380709 .. 2380721 -  -4.8  -3.24137   AACCAGCTCATAATA                CTGC CTCCC GCAG                GTTCTCAACGCGGGT  53 5
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL 2376456 .. 2376467 -  -5.8  -3.54146   GTCCCTAATTAAAGA                GCCT ATTC AGGC                 TTCTAAACGAAAAGC  59 28
        nuoM NONE
        nuoN 2373369 .. 2373396 - -15.6  -4.87291   GACGGTAATGAAAAA        CCCCCTGCCAGC TCAT GCTAACAGGGGG         TTTTTCATCAACACA 100 72
ND012_RS10775 NONE
ND012_RS10770 2372069 .. 2372110 -  -4.5  -3.92522   GCTGAACCGGATAAA TAGCCTGACCTGATTTTTT AGAT AAATAACCAAGAGAGGCTA  ACTTCTGCGCGACGA  61 64
        menF 2370211 .. 2370225 -  -5.6  -5.06414   GGTGGCGAAGAAAAA               GCCCTG CGC CAGGCC               AAAGTTTTGTCGTTC  82 351
        menD 2368473 .. 2368491 -    -3  -2.82516   CTGGCCAGTATCACA             GTTCAGCG ACC CGTTGCAC             CAAATGTTGCAGGGT  43 2
        menH NONE
        menB NONE
        menC NONE
        menE 2364426 .. 2364447 -  -5.1  -3.33815   AGTCGCTTCAACCAA           GCAGGAG-GG TCG CCTCTTCTGC           TCGGTTGAAGCTAAA  55 85
ND012_RS10730 2361902 .. 2361928 -  -2.2  -3.73042   TGGGGTAGGAAAAGA        CGGGGGC-CAG TTTATG CTGCGCACCCA         TTTTATCAGGTGCGC  49 80
ND012_RS10705 2355542 .. 2355554 -  -4.7   -3.0082   AAGCCAGTAAAGAAG                TCCGC AGT GCGGT                AGAAAAATAATCTAT  50 263
ND012_RS10695 2353612 .. 2353634 - -13.5  -3.23984   TAAAGCGATCATCAA           CCTGCGTAC TTCAG GTACGCAGG           TACCCTATTCTGACA  88 331
        gyrA 2345815 .. 2345832 -  -8.4   -5.3236   ATAACCCATAAAAAA             GCCAGC ACGCTG GCTGGC              TTGAGTTTTCATCAT 100 83
        rcsC 2342708 .. 2342720 -  -7.7  -5.28778   AGTAGCCAGAAAAAA                TCAGC CAT GCTGA                AACTGGGTGTAGATA  93 197
        ompC 2336127 .. 2336152 - -15.5  -3.43288   TAAAGCCGAGCATAA         GAAACGCGACC CAAA GGCCGCGTTTC          TTCATCAGAACGTTC 100 56
ND012_RS10640 NONE
ND012_RS10635 2335728 .. 2335743 -  -7.6  -6.53504   CAGACAAAAAAAAAA              GACATC CGAA GATGTC               TTTTTCTACTTCTGG 100 38
ND012_RS10630 2334919 .. 2334968 -  -7.7  -2.81951   GCACCAAGATATAAC TGCCGCTCTTGCGAGCCAAGACG CTAA CGCACTGGCAGACAAGAGCAGCT TATATCCCACCTGAC  61 100
ND012_RS10620 2332009 .. 2332023 -  -2.8  -4.46233   GGAACGTGAAAGAAA               TACCGG GAG CCAATA               GTCTGATCCTGGCTG  62 320
ND012_RS10555 NONE
ND012_RS10550 NONE
ND012_RS10545 2323909 .. 2323929 -  -6.1   -3.2794   GCTCAGTCATATCAA            GCCGCCT TAGGCGC AGGCAGC            GCCAGATAACGAAAT  59 1
ND012_RS10540 NONE
ND012_RS10535 NONE
ND012_RS10530 NONE
ND012_RS10525 2321608 .. 2321618 -  -3.2  -3.94773   TGCCAAGACAAAATA                 CAGC AGC ACTG                 AGTTTTTATCCAGCA  56 31
ND012_RS10520 NONE
ND012_RS10515 2319802 .. 2319814 -  -2.6  -2.52896   CCACTGTTTAACCGA                CCCG CGTGC CGGA                TGCCTATACACAACA  41 45
ND012_RS10510 2318548 .. 2318565 - -11.3   -4.4874   CTTAAAAATGCAAAA             GGCTCAC CGAA GTGAGCC              TTAAGCTTGATTACT 100 418
ND012_RS10500 2317680 .. 2317699 -  -3.4   -5.0925   GGCTAAAACGAAAAA            GGTCACGC AATA GCGCAGCC             TCATAATTATTTACC  75 79
ND012_RS10495 NONE
ND012_RS10490 2316574 .. 2316586 -  -3.3  -3.27022   TCCAGGTCATAGCAA                TGCTC GTC GGGCA                GTTTCAAACCGCGCC  47 4
ND012_RS10485 2316137 .. 2316156 -  -5.7  -2.74012   CTATCACCCCAAGTA            GTACCGA CGAACT CCGGTAC             CTCACATTCAGTTAA  53 93
ND012_RS10480 NONE
ND012_RS10475 2314844 .. 2314863 - -13.6   -5.4251   TTCAGATACAAAAAA            GCCGCCAT TCTT ATGGCGGC             CTTAAGATGTCAATG 100 46
ND012_RS10470 2314416 .. 2314440 -  -8.5  -4.78848   CCCTTAAATAGAAAA          GCCACCAGCTT ATG AGGCCAGTGGC          TTAGAAATATAAGAT 100 71
ND012_RS10465 2313680 .. 2313690 -  -4.6  -3.39803   TAGCTAGACGCAGAA                 CGCG GCG CGCA                 ATGCCCGTGCAGTAA  53 82
ND012_RS10460 NONE
ND012_RS10455 NONE
         gpW NONE
ND012_RS10445 NONE
ND012_RS10440 NONE
ND012_RS10435 NONE
ND012_RS10430 2307178 .. 2307201 -  -8.8  -3.79419   TCTCTCTATAAAATA          GCCCGACAAC CTGC GCTGCCGGAC           GGAATGAAGACGTGC  78 87
ND012_RS10425 NONE
ND012_RS10420 NONE
ND012_RS10415 NONE
ND012_RS10410 2304857 .. 2304870 -  -2.3  -3.58269   GAATTGACTCCTAAA               GGTTG ATAG CTACC                AGCGGTTCTGGTGTG  49 7
ND012_RS10405 NONE
ND012_RS10400 NONE
ND012_RS10395 NONE
ND012_RS10390 NONE
ND012_RS10385 NONE
ND012_RS10380 2299908 .. 2299923 -  -7.5  -5.86976   CCAGAAAACAAAAAA              CCCGC ACAAAG GCGGG               CTTACAATAAAGTGG 100 135
ND012_RS10375 NONE
ND012_RS10370 NONE
ND012_RS10365 2296802 .. 2296826 -  -2.8  -2.91735   TTAACATTCCAGAGA          GTGGTGATAT CCGTC ATTTCACCCC          CTCTCCGGGCGGCTC  43 14
ND012_RS10360 NONE
ND012_RS10355 NONE
ND012_RS10350 2294375 .. 2294385 -  -3.2  -3.60048   TTGTTTTTAAAAAAC                 CACC ATC AGTG                 ATTAATTTTGAAATG  51 288
ND012_RS10340 2293268 .. 2293301 -  -7.6  -3.53811   CGGAGTTCCGTTAAA     TCTTGATAGGCCACA TCGTT CGCGGCCTAT-AAGA     AATCACTCAAGCTTT  68 28
ND012_RS10330 2291267 .. 2291284 -    -7  -4.60255   ATAATCTCTTAAAAA             CCAACC CATTGC GGTTGG              TTTTTTTATGGGTGG  79 509
        yejK 2287656 .. 2287681 - -11.9   -4.7373   TGATGCGATGAAAAA         TGCCAGCCAGT TCAT ACTGTCTGGCA          TTTTTTGTGTTTATT 100 191
        rsuA 2284264 .. 2284301 -  -6.3  -3.03338   ATAACTCCTTCAATA   GCCTAGGTTCTCAGAAT TTTC ACCCTGAGAACGCAGGA    AAAAACCAGTAACCT  56 79
ND012_RS10285 2283010 .. 2283035 -  -7.5  -2.63922   CAGCAGGCAAAAAGC         GTGCTGCCAGT CATC ACTGGCAGCGT          TATGTATTCACGAAT  58 40
ND012_RS10280 2281609 .. 2281636 -    -4  -4.72986   GAGGTTCATCAAAAA        CTCACCGTTGCC GAGC GGGAACAGCGCG         TCATCACCGCAATGG  71 422
ND012_RS10235 2270811 .. 2270828 -  -2.7  -4.34285   GATTCAAACAAAGAA             CCATC AAAGTCAG GATGG              TCTGCATCAGATATT  59 203
        uxuA 2267606 .. 2267636 - -14.8  -3.64703   TCTCGCTGATTCAAA       CGTTAAGAGCCGGT AAA ACCGGCCCTTAACT       GTCAACCTATTGAAT 100 46
ND012_RS10210 2264970 .. 2264988 - -11.8  -3.61988   TCACTGATAAATCAA             GGCGATAT CTA ATATCGCC             TTTTTTATGCCTGAA  93 55
        fruB NONE
        fruK NONE
        fruA 2256555 .. 2256572 - -11.3    -5.626   CACGGGATAAAAAAA             CCGGAGT CTGC ACTCCGG              TTTTTTTTGGCTCAA 100 50
ND012_RS10165 2253804 .. 2253815 -  -2.2  -4.07568   TTTGCGTGCCGAAAA                CGAA AATA TCCG                 ATGATGTGGGCTACG  53 142
        yieE 2252683 .. 2252714 -  -8.7  -5.40072   TCTGCTCTAAAAAAA      TCGAGGCGGGATT GTAACA AATCCCGCCACCA       TGGGTAGTCTGAATG 100 170
ND012_RS10155 2251088 .. 2251107 - -12.2  -5.14563   TTTCTCATTAAAAAA            GGGCGATT AAAT AATCGCCC             TTTTTTACACTGACT 100 80
ND012_RS10150 2249712 .. 2249736 -  -4.3  -2.95298   GTTACCTATTACAGA          CTATTTCGTTG AAT CAACCCAATAG          GTTCCGGTTGGCTCA  47 1
ND012_RS10145 NONE
ND012_RS10140 2247774 .. 2247808 -  -7.3  -4.28069   ATATAACTTAATAAA     CCACCATATTTATCT GGAAT ATATAAATACGGCGG     CCTGAATTTTAAATT  75 39
ND012_RS10135 2245348 .. 2245376 -  -3.9  -5.54192   ACGAATGCAAAAAAA        TAACCGACG AGTGATTAAAA CGTCGGCTA        TTTCTTGGCGCGTAT  84 306
ND012_RS10130 2243594 .. 2243611 - -11.3  -5.60993   TCTCGCATAAAAAAA             CGGAGCT AATC AGCTCCG              TTTTTCATCACAAAT 100 55
ND012_RS10120 NONE
ND012_RS10115 2239504 .. 2239515 -  -3.6  -2.99704   TTGGCAGTAAATAAC                CGAC TATC GCCG                 CATAGTCATATGAAT  46 17
        tmaR 2238951 .. 2238970 -   -15  -3.23598   GAACCAATGCACTAA            GGCCAGGC AATC GCCTGGCC             TTCTTGTTTTGCCCG 100 53
        citC NONE
        citD NONE
ND012_RS10040 NONE
        citF NONE
        citX 2221648 .. 2221664 -  -2.9   -4.1964   GCCAACAGTGCAAAA              TAGGCCA TCT CGGCATA              ATCCTGCACCTGAGC  57 57
        citG NONE
ND012_RS10020 2219131 .. 2219141 -  -2.4  -3.08638   ATAATCAAACCAAAT                 CGCC AAG GGGG                 TTTTATAGTAGAGGT  43 216
ND012_RS10015 2218366 .. 2218380 -  -5.8  -2.83715   GTTAGGAGCACTAGA               TAATCA ACA TGATTA               ATAAGCGATAAAAGT  53 23
ND012_RS09990 2216254 .. 2216282 -  -8.2  -3.41073   TACTCTAGGTAAATA        CCTTAAGGCCAC CTAGC GTGGCCTTAATA        GCGTGGTTTAGGTCA  71 72
        cspE 2206962 .. 2206975 -  -9.5   -5.4833   TCAGGCAATAAAAAA               CCCGC CTAA GCGGG                TTTTCTCAATAATTA 100 53
        dsrB 2206501 .. 2206530 - -14.3  -5.50313   GATAAAAGCAAAAAA       CCGGAGCAAGGTA ACCA TCCCCTGCTCCGG        TTTTTTTATATGCAG 100 44
ND012_RS09940 2202860 .. 2202898 - -13.5  -3.35996   GATGTTCATCCATAA   TAACTACTTACTCTC CGACGGGGT GAGAGTAAGTAGTTA   TTGACGACCTGATAG 100 85
        flhD NONE
        flhC NONE
        motA NONE
        motB NONE
        cheA 2195590 .. 2195602 -  -7.7  -4.07568   GTCGCTCGGCGAAAA                CTGTC ATT GACAG                TACGCCGGTGAAATA  74 106
        cheW 2194755 .. 2194771 - -11.5  -5.00616   TGCTGTTGTAAAAAA              GGCGGGG AAT CCCCACC              ACAAACTGCTGACAA 100 220
ND012_RS09900 NONE
ND012_RS09895 2191248 .. 2191260 -  -5.5  -3.34716   TCACCCTTTAAAAAT                GACGT ATT ACGCC                GTTTAACAATCTGAA  55 28
        cheR NONE
ND012_RS09885 2189264 .. 2189277 -  -4.5  -4.37711   CGATTAAATGCAAAA               CCGAT TATC ACCGG                AATGTTTAAATCTGA  66 50
        cheY NONE
        cheZ 2188115 .. 2188167 -  -9.4  -2.74157   CAATTATCAGAGAAG GTAAAGGCCAGTTTTGCAGATGAGGG TAG CCCTCATCTGCATAG-TG-CATTTAC TTTTGGTCTAAAAAC  70 33
        flhB NONE
        flhA NONE
ND012_RS09855 2181875 .. 2181887 -  -5.5  -3.73953   ATTATCTGGATCAAA                GCCGT TTG ACGAC                CGAAACTGCGGTCAG  59 467
        flgB NONE
        flgC NONE
        flgD 2178837 .. 2178858 -  -2.9  -3.64822   ACTGCTTTAGCTAAA           CTGCTTTCC GTGC GCGAAGCAG            CGGACTTACAGGATC  50 31
        flgE NONE
ND012_RS09815 2176639 .. 2176655 -  -4.5  -2.52464   GGTTTTGGCAATCCA              TAATGAT CGG ATCATCA              GTGTATTCCTCTGCG  47 50
        flgG 2175839 .. 2175862 - -14.6  -3.05463   ATCGGCTTCACGCAA          TCAGGGGGCA ATCC TGCCCCCCGA           AAACGGTCTTATAGC 100 34
        flgH NONE
ND012_RS09800 NONE
        flgJ 2172928 .. 2172953 - -11.9  -5.44721   ATGAGTGTAAAAAAA         CCGCCCACAGA CAAG TCTATGAGCGG          TGGGTAGATTGAACA 100 60
        flgK NONE
        flgL 2169915 .. 2169955 -  -6.8  -4.72201   GCGGATAAAAAAGAA  GGTATGCCATCCCAAACC TTAGT GGGAAAAGATGGCATACC  GAAAAGTGTACCCGG  79 96
        fliE 2157681 .. 2157701 -    -4  -5.36441   CCGCCAGATAAAAAA            CATCATTC CACCC GCATGATG            AAATCGTTTTATTAA  81 521
ND012_RS09705 2156586 .. 2156607 -  -5.9  -4.08706   TCTCTATCAGATAAA           TATCAGGCT GAAT AACCCGATA            ATTTACTTCAAGCCT  68 33
         kch 2155217 .. 2155262 - -12.2  -3.94188   AGCCATCTTAAACAA GCACAATAACCGAGGATAGAC GATAA GT-TATTCTCAGTTATTGTGC TGATGATTAATTGGT 100 32
ND012_RS09670 2147142 .. 2147161 - -12.8   -5.4251   CGCAGAGACAAAAAA            GCCCCCGC CAAA GCGGAGGC             TTGATAGCATTGCCA 100 49
ND012_RS09665 2145654 .. 2145673 - -12.8  -5.49569   TACCAAGACAAAAAA            GCCCCCGC CAAG GCGGAGGC             TTGATAGCATTGCCA 100 49
ND012_RS09660 2144173 .. 2144189 -  -7.2  -4.74285   ACCGATAAGATAAAA              GGCGGC GAAAT ACCGCC              TTTTGTTATTTAAAA  81 51
ND012_RS09655 NONE
        fliZ 2142466 .. 2142496 -    -4  -5.30616   GGATGTAAATAAAAA      CGCCCAACAG-GA CATATT TCACCGTCGGGCA       TTAATCAATATTTAA  81 47
ND012_RS09645 NONE
        tcyJ NONE
        tcyL NONE
        yecC 2138790 .. 2138807 -  -7.7  -4.13767   TTCTGTATTTGAAAA             GAGGC-CC TTC GGCGCCTC             TGAGGCTCATAACCA  76 239
        putP 2132769 .. 2132802 - -11.7  -3.05644   GGGAGAATCAGAAAG     GCGCTCACTGCCGGT TGGT ACGGACAGTGAGCGG      ATTAAGACCATTTAG  83 37
        cadC 2130957 .. 2130988 -  -7.4  -4.71318   AAGACGAAAAAATAA      CACCGCCGC-TTA AATAAAA TAATGCGACGGTG      TCGATAGGAATTATT  81 36
        cadB 2129217 .. 2129230 -  -2.3  -3.64822   ATTTCTCCAGGTAAA               GCGAG GCCC CTTGC                CATCACGGATGGCAA  49 85
        cadA 2126952 .. 2126982 -  -8.3  -5.06816   AGCCGTTAATAAAAA      GCGTGGCGTCAGGA TTAT TCC-AACGTCACGC       TTTTTTATTATTTTA 100 99
ND012_RS09595 2124929 .. 2124957 -    -7  -3.81027   GGGAATCAATTGAAA       TGGTGAAAAGATA TGTG TAT-TTTTCACCA        AATCATTTAAATGAA  67 141
ND012_RS09585 2123324 .. 2123336 -  -5.5  -4.57073   TATTTCCGTCAAAAA                TCAGC AGA GCCGA                ACCGTGATAATCCAA  70 88
        uvrY NONE
        uvrC NONE
        pgsA 2118778 .. 2118791 -  -2.4  -3.02511   GCTATTCCCGCAACA               TCAG AACTTA CTGA                TTTCTTTTGCTATCT  42 152
ND012_RS09560 2118673 .. 2118686 -  -4.5  -3.68351   GCCTTACTACTCAAA               CTCGC TATT GCAAG                CTTTATAAATTTGGA  57 37
ND012_RS09555 NONE
ND012_RS09550 2118416 .. 2118429 -  -9.5  -6.09196   CTTAAAACAAAAAAA               CCGCC TCTC GGCGG                TTAACGACATACTCA 100 72
ND012_RS09525 2114182 .. 2114192 -    -4   -2.9462   CACTTAGTTAAATTA                 TGAT TAA ATCA                 ACCTTATTTTTATTC  47 7
ND012_RS09520 2113254 .. 2113297 - -12.8   -4.1899   TTAGGGTATTGAAAA TATTATTATTCCTGAACATT ATAA AATGTGCAGGAATAATAATT AAAAGAGTTTCACCT 100 35
ND012_RS09460 NONE
ND012_RS09455 2105411 .. 2105425 -  -4.2  -3.78775   GCCTTTAGTAGCAAA               CTGCTT GCG AAGCCG               TTCACCACGCCGTCC  57 115
ND012_RS09385 2089498 .. 2089527 - -15.9  -3.72893   CACGCCCCTACTAAA       CAAGAAAGCGGCT ATAA AGCCACTTTCTTG        TTTAGTGACGATCAG 100 37
ND012_RS09345 2082735 .. 2082768 -  -6.8  -3.60805   ATAGGTCACGGTAAA     CACAACGCCCAC AGTTTAAAAA GTGGGCATTATG      GGTCACTTGCGCTTC  65 46
ND012_RS09340 2077495 .. 2077509 -    -5  -4.03234   GCCCGTGCAGAGAAA               GATGAC GTC ATCATC               TGTACAAAAATGGAT  62 504
ND012_RS09330 2073989 .. 2074002 -  -5.3  -5.15969   GCTCAACGTAAAAAA               CATCA ATAA TGATG                AGAAAGTATACCATA  81 165
ND012_RS09285 2058859 .. 2058879 -  -3.3  -5.23765   TAAATAACATAAAAA            CGACATTAA TAC TGAATGTCA            GTTTATTATTCGACT  75 507
ND012_RS09275 NONE
ND012_RS09270 2057555 .. 2057576 - -10.1   -5.4251   TCTACAGATAAAAAA           CGCAGCTAG CTTC CTGGCTGCG            TTGCCATAAGGCGGA 100 52
ND012_RS09265 2055761 .. 2055780 -  -2.8  -3.53444   CCAGGTTCTTTTAAA            GGCGTTTC TAGC GAAATACC             CTTTCTAATGAATGA  49 463
ND012_RS09240 2049220 .. 2049236 -  -6.7  -2.81815   GGGAATGAGTAACGA              GAAAATA TAA TATTTTC              ATTTTTAATACCGTC  57 165
ND012_RS09235 2047743 .. 2047757 -  -8.5  -5.06414   CGCTGTTAACAAAAA               GCCCC TTATC GGGGC               TTCAGACTGGCGATT 100 43
ND012_RS09220 2042948 .. 2042960 -  -2.6  -3.64703   CTGCTGCGAGCCAAA                GGCA TTACC CGCC                TGTTTGCCTCTGTTG  51 367
ND012_RS09205 2039961 .. 2039975 -  -3.6  -2.78596   GAGTGGGTCACCATA               GTTCTT CCG AAAAAC               GCAAACTATACCTGA  45 297
        rluF 2039026 .. 2039050 -  -7.9  -4.25104   CCGTGTGCAGTAAAA         CCCCGTCCTT CATTGC AAGG-CGGGG          AATCATCATACGGCG  79 62
ND012_RS09195 NONE
        chbC NONE
ND012_RS09185 NONE
        chbA 2034871 .. 2034887 -  -5.1  -2.55021   AAATAACCGACGAAT              CTGAGCC ATA AGCTCAA              TGTTATCTGGATCAA  49 37
        chbR 2033972 .. 2033987 -  -5.4  -2.52676   TACCTTGTTAATGTA              TTCCGC TGTG GCGAAA               TGAGCGGAAAACTAA  49 37
        chbG NONE
        cspA 2030964 .. 2030983 -  -2.1  -3.60475   AACTTTTACGGTAAA            CCGTTAA CACTAT TTTACGG             GAGAGAAATATTCAC  49 96
        cspA 2030499 .. 2030511 -  -6.2  -6.09196   CTCAAAATAAAAAAA                CCGC TCAAG GCGG                TTTTTTATTTTGACT 100 100
ND012_RS09140 2028237 .. 2028254 -  -4.9  -3.57239   ACCGAAATATTATAA             TACAATG CTCT CATTGCA              GGCATATCACACTAA  55 326
        ddlA 2026945 .. 2026962 -  -8.4  -4.60041   ATGCATCGGCAAAAA             GGCTGC GATCAG GCAGCC              TTCGACAAGAATCCA  91 48
ND012_RS09125 NONE
ND012_RS09120 2024080 .. 2024112 -  -8.6  -4.90266   TTGATTAACCAAAAA      CCCCATTGCATTAA AAAAA TTAATGTAATGAGG      AGCAAATGATAACAT 100 395
ND012_RS09115 2022538 .. 2022551 -  -8.1  -3.36452   ATTGCCGAAGAGGAA               GAGCG TCTG CGCTC                GATTCAGAATCCCGA  66 115
ND012_RS09100 2018039 .. 2018049 -  -3.2  -3.93262   CTGGAATAGACGAAA                 TCGG CCA CCAA                 ACAGAATAGATTAAT  56 155
ND012_RS09095 NONE
ND012_RS09090 2017521 .. 2017537 -  -6.5  -3.00298   CTCCCCAATCATAGA              GCCAACG TGA CACTGGC              TTGGCGCGTCATGAT  56 45
ND012_RS09080 2015990 .. 2016011 -  -8.7   -4.4648   AGTCCGATTATAAAA           CCCGCAC CACACACC GTGCGGG            TTTTAATTTTAACTC  93 34
        mgrB 2015297 .. 2015309 -  -2.6  -3.49866   CGATAAACAGAAAAC                CGCC CTTTC AGCG                ATACAACCATAGCTT  48 55
ND012_RS09065 NONE
ND012_RS09060 2014382 .. 2014398 -    -8  -2.71712   GCCCTGTCTCGAAAT              TGGCAG CGGTT CTGCCA              GCTTGTTACATGGCG  60 31
ND012_RS09055 2013895 .. 2013905 -  -8.2  -4.41348   CTGTCCGTAAATAAA                 GCCG CGG CGGC                 TTTTTAACATTTAAA  87 192
ND012_RS09050 2012427 .. 2012442 - -11.8  -5.37345   TTCAACCATAAAAAA              CCCGCC GATA GGCGGG               CTGAAACTACCGAAA 100 55
ND012_RS09040 NONE
        cspE 2010130 .. 2010145 -  -7.5  -5.25893   ACACAGACGAAAAAA              CCCGC ACGTAG GCGGG               TTTTTTTTCAGCTAG  91 48
        ftsI NONE
        rlmA 2006258 .. 2006291 -  -6.8  -3.44146   CTTGCTGACAATCAA    GCCAGATAGCGCCAAC TTAT GTTTGCGC--TCTGGC     TAGCAGATTAATTAT  63 225
ND012_RS09005 2004023 .. 2004038 -  -6.8  -2.67708   AAACGGATTACATGA              CCGGAT TACT ACCCGG               GCTTTTCATTCTCCC  53 365
ND012_RS08995 NONE
ND012_RS08990 NONE
ND012_RS08985 NONE
ND012_RS08980 NONE
ND012_RS08975 NONE
ND012_RS08970 1993800 .. 1993822 -  -7.7  -3.14132   TTCGTGTGGCAGTAA           GGGGTGAAC GCAAG GTTCACCCA           CTGATGGACTTAAGG  63 35
ND012_RS08965 1993185 .. 1993215 - -10.4  -2.67441   GAATCGATGATATGA       CACCGAAGGGCGAT ATC ATTACCCTCCGGCG       TAGGGGCCATCAAAG  74 35
ND012_RS08935 1986525 .. 1986549 - -20.1  -4.00469   TGAAGATGAACGAAA          GAACGGGAGCC ATT GGCTCCCGTTC          TCAGATTGATGACAA 100 225
ND012_RS08915 1982247 .. 1982276 - -15.1  -2.70452   TGGGGAAAGAAAATG       GAAGGCTTCGGCA AAGG CGCCGAAACCTTC        TGGATCGTTAGCCTT 100 33
        dbpA 1979202 .. 1979238 -  -8.8   -2.6583   TACAGTGTAAAGTGA    TTTGACGGGATGATGC AACCG ACATCATCCCGTGAAG    CTATTTTTGCCGTTT  66 97
ND012_RS08900 NONE
        yqfB 1978482 .. 1978502 -  -3.3  -2.81471   GAGAATTCCATTACA            GAACTAACA CTG TGTAAATTC            GATCGCGTAAAACTG  43 8
        yebF 1977937 .. 1977968 - -13.1  -3.02639   AGCGGGAAATAATCA      GTGCAGAACGCCA TCGGTC TGACGCTCTGCAC       TATCAGCCAAAATAG  95 93
ND012_RS08885 1975587 .. 1975616 - -10.8  -3.32832   GGGAAAAATATTGAA       CAGATAGCCCGA CAGGAT CCGGACTATCTG        CGCTGGATGTTGAAA  78 106
         pip 1973087 .. 1973106 -  -4.4  -4.29845   GAACCTAAGGTAAAA            TAAAGCAGA AAT TC-GCTTTA            TTATTTTTCACGGCC  63 131
        ftnA 1971885 .. 1971917 -  -2.6  -5.32608   AAAAAAGCGAAAAAA     CCGCAGTTTCTGCCA AGAA CAGC-GTCACTGCGG      TTGATATTGATAACT  76 49
        yobA NONE
        copD NONE
ND012_RS08850 1969583 .. 1969609 -  -7.4  -5.57054   AATAAGTTAAAAAAA         GACCGAATAC GAATCCT ATATTCGGTC         CAGGGAAATGGCTCT  95 244
ND012_RS08825 1963730 .. 1963779 - -10.9  -4.88228   ATTTAACATTAAAAA TACATGACCGATAAATACCGGTG TTTA CTCCGGTATTTATCGATTATTCA CATGTCTATTGACAC 100 31
ND012_RS08815 NONE
ND012_RS08810 NONE
ND012_RS08805 1960490 .. 1960513 -   -11  -4.17023   CTAATCACCCCAAAA          CAGCCCCCAC TAAT ATGGAGGCTG           TGAAGTTTTATCGGA  93 64
ND012_RS08800 1959683 .. 1959698 -  -3.2  -4.30987   ATCGGCCAGAAGAAA              CGGTTA AAGC TAGCCG               TTGGAAGCAAGAAGA  61 119
ND012_RS08795 1959359 .. 1959370 -  -2.2  -2.62616   GCACTGTTGATATTA                CGCT GGGC AGCA                 ATGGTATTTGCTTAA  40 37
ND012_RS08785 1958257 .. 1958293 -  -6.5   -3.4214   ACCGGAATAAACATA    CCGATTTAATGCGCCAG CCT CTGGCACTTTTTATCAG    CTCGACTATTCTCAA  61 456
ND012_RS08760 1950898 .. 1950917 - -12.2   -3.1552   GCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCC             TCCAGCAATTGCCAC  86 53
        proQ NONE
         prc 1948031 .. 1948054 -  -9.6  -5.02074   TCATGGCGTAAAAAA          TCCGAAGCCT CGAA AGACTCCGGA           TTGTTAAAGGTGACG 100 48
        htpX 1946828 .. 1946857 - -12.8  -2.71765   ACACTCGAAAGCAAT       CTGAGACCCCGC GTAAAT GCGGGGCCTCGG        TGTTTTCGTCAAAGT  91 50
        kdgR 1944042 .. 1944062 - -14.7  -4.18197   ATGCTGCATGGAAAA            CGGCCCCTG AAT CAGGAGCCG            TTGAGATACGCGGGT 100 93
ND012_RS08725 1942771 .. 1942797 - -12.2  -5.20333   CATTCATAACAAAAA         GGCCGGGCAGCT TAA ACCTGTCCGGCC         TCAGACTGCTGACAG 100 234
ND012_RS08705 1938529 .. 1938555 -  -7.3   -5.0925   TGCCAAAATGAAAAA         GCCTGCCTC AAATCAACA GAGACAGGC         TTTATACGTTATGTT  90 65
ND012_RS08675 1932904 .. 1932946 -  -9.3  -5.01422   CTAGATAAAAATAAA CGCTAACCGATGAAATACTG CCTG CAAGATG-CATCGGTTAGCG ATTCAAAACCGTTAT 100 37
ND012_RS08665 1931230 .. 1931249 -  -2.2  -5.14965   ATGGGGAGCAAAAAA            TAAAATCT TATC AGTTTTTA             TTCATCATTTTATTT  71 386
ND012_RS08655 1929767 .. 1929809 -  -2.7  -3.30007   AACACTGCGGGAGAA TGCCAGTATCGCTCCGGTGG ATAT CCACCGGAAAAACACCT-CA AATATTGGCAATGCT  46 39
        thrS NONE
        infC 1925421 .. 1925439 -  -5.2  -2.79327   TCATTTTACGTAAAT             GCAACGTG AAA CCCGTTAC             TTGTATGCCTTACTG  50 35
        rpmI NONE
        rplT 1924720 .. 1924754 - -12.3  -3.71527   CTGCAATCAGGCAAA     GATTAAAAGAGGGAG ACAAG CTCCCTCTTTCATTC     TGACTTACGCCAGCG 100 30
        pheS NONE
        pheT NONE
        ihfA 1920557 .. 1920572 - -11.8  -4.34345   TACAGACGAGGAAAA              GGCCGC TTGC GCGGCC               TTTTTTTTTGTCGGA 100 45
ND012_RS08605 1919727 .. 1919739 -  -3.3  -4.20696   TCACCAATGCCAAAA                CCTGC TTT GCAGT                TGTACCTTCACCACG  60 172
ND012_RS08570 1915930 .. 1915945 - -11.8  -4.57516   AGACGCAAAGGAAAA              GGCCGC TTGC GCGGCC               AATATCACTTTTTAA 100 167
        btuC 1914597 .. 1914610 -  -6.7  -2.59564   TCGTTAGCTGATAAT               CAGCA TAAA TGCTG                GCTTGTTGGTAGCGG  56 149
        btuD 1913732 .. 1913755 -  -2.6  -4.90778   CCCAGTCAAAGAAAA          GATACCTTATT GGC AATA-GATATC          GGTATGAAGTTAATT  67 80
        arnB NONE
        arnC NONE
        arnA NONE
        arnD NONE
        arnT NONE
        arnE NONE
        arnF 1905935 .. 1905952 -  -4.1  -4.43669   AGGGAAAAAACGAAA             CACCAAG CTAT CTTGCTG              TATTTATCGGACTAA  66 96
ND012_RS08520 NONE
ND012_RS08515 NONE
ND012_RS08510 1902400 .. 1902426 - -10.1  -4.21631   AAGTGATGGAACAAA         CCGGTTGCACC CCACT GGCGCAACGGG         ATTATCGGCAGTTAT  85 492
        ppsA 1891586 .. 1891605 -   -10  -5.59534   AAGGATAATAAAAAA            TCCGCAAC CTGC GCTGCGGA             TTTCAGAACATTCCC 100 56
ND012_RS08450 NONE
ND012_RS08445 1886005 .. 1886029 - -12.2  -2.91099   CAGATTAGAAAAGAT          TCGGAACCCG ATCAA CAGGTTCCGA          TAGCGTGGTCGTAGC  86 70
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS 1880289 .. 1880310 -  -5.1   -4.5187   CTGAAAAAAAGTAAA           GCCGACCAT AAAA ATAGCCAGC            TTTGATAACGATAAT  70 61
        sufE 1879651 .. 1879665 - -12.8  -3.62864   TAAAGGTAGTTGAAA               GGCGGC CAG GCCGCC               TCAGATTGCTGACAA 100 202
ND012_RS08410 1878173 .. 1878191 - -14.6  -4.87291   TACTTCAATGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCCCGA 100 157
ND012_RS08375 1872520 .. 1872545 - -13.4  -3.76373   GCCGCAATAGTTAAA         GGGATGCCAT TCATTC ATGGCATCCC          TGTTGCTATTTTGCT 100 114
        punR 1868604 .. 1868622 -  -6.7   -2.9627   TTAAGCCATCAGACA             GAAGTCG GAAAA CGACTCC             GCTGACTTCTGTCTT  58 47
ND012_RS08350 1867091 .. 1867111 - -11.1  -4.25347   AATCACCAAGATAAA            GGGCGGATA GAT TCTCCGCCC            TTCTCACTTATCGTC 100 62
ND012_RS08335 1864526 .. 1864545 - -12.2  -4.82901   TGCCCGTGATAAAAA            TAGGTGGC CGGA GCCACCTA             TTTTATTGTATCCAC 100 57
ND012_RS08305 1858985 .. 1858997 -  -4.1  -2.94412   GGCAAGGTTAAATCA                TCCTG ATG CAAGA                AAATGGCCGTTAATC  47 59
ND012_RS08300 1857555 .. 1857579 -  -5.1  -4.44608   TTTACCGAAAAATAA         CCTAT-CAGG GGAAGA CCTGAATAGG          GTTAATTTACCCACT  70 473
        slyA 1856300 .. 1856324 - -14.3  -5.47218   GCGGACGTAAAAAAA          CCGAGGCTCAC ACG ACGAGCCTCGG          TTTGTTTTCTTTTGC 100 70
        anmK 1854231 .. 1854241 -  -8.2  -3.02144   TTAGCCTTTTTAACA                 GCGG CAA CCGC                 AGTCATCACCGATTT  65 86
        pdxH 1853439 .. 1853457 - -10.2  -4.40601   AAGGTATAGAATAAA             GCGCCCGC CGC ACGAGCGC             TAGGTTTAACCTCAA 100 54
        tyrS 1851980 .. 1852000 -  -9.8  -3.78953   ATCTTGACCATTAAA            TAAGGGAC CTAAT GTCCCTTA            TTTAATACACCGTTT  84 40
        pdxY 1850984 .. 1851021 - -11.3  -3.08996   TATTCTGACTGAAGA   CTGCCCGGCAATCG-GCC ACT GTCGCGATTGCCGGGAAA   AGAGTATTACAGTTT  84 32
        cbpA NONE
        cbpM 1845614 .. 1845644 - -14.8  -2.72344   GTTTATCGTTAATCA       CCAAAGGCACCAAC CTG ACCGGTGCCTTTGG       TTTTACGATTAAACG 100 170
ND012_RS08190 NONE
        ytxB 1834857 .. 1834891 - -10.1  -2.73334   AGCAATCATACACTA     TCCATCTGCACCTGA TGATT TCAGATGCAGATGAC     ATCCTGACGGTAACT  71 46
        pspA NONE
        pspB NONE
        pspC NONE
        pspD NONE
ND012_RS08155 NONE
ND012_RS08150 1829306 .. 1829345 -  -9.9  -2.54723   CTGCAACAGCAAGAT  TGGCCACGTGGATGGCG AGATGA CCCCACCCCCGTGGCTA   CCATGGACATCGGCA  66 205
        tyrR 1826666 .. 1826684 - -14.6   -3.9941   GTTGGTATAATGAAA             CGGCTGAC ATT GTCAGCCG             TTATTGATTGACTCT 100 19
        ycjG 1824742 .. 1824752 -  -5.4   -3.1994   CAGATCATTGAGGAA                 TTGG CGC CCAA                 CTGGGTGGTTTCTTT  52 289
ND012_RS08115 1822295 .. 1822323 - -10.3  -2.97408   CCGGAGCGAAATAAG        CGACAGAGCTGGA TTT TTCAGCCCTGTCA        TAACCGATTTAATGT  76 34
        zntB 1821008 .. 1821032 - -12.2  -5.64274   TGATGGATAAAAAAA          TGCCGGTGTC TATTC AACACCGGCA          TCGTAACAATTAATG 100 226
        ttcA 1819850 .. 1819889 -  -6.6   -2.7263   ATGATGTGCTGAAAT  CGATAAAGTGATCAGTCA GTGA TTATTGATCACTTTATCT   TTTTGGTACTAAAAA  56 41
ND012_RS08095 1815279 .. 1815291 -  -7.7  -2.82623   CTGTTGCCAGAATCA                GTACC GCC GGTAC                TAGTGACATTACAGA  61 252
ND012_RS08085 1813929 .. 1813939 -  -6.8   -3.4158   CCGAAAAATCAGCAA                 GGCA ATA TGCC                 GAACATTGAGTTCGG  59 363
ND012_RS08070 1809342 .. 1809356 -  -2.8  -2.98582   ACAACATCCAGAAAT               GAAAAG ACG CTTTGC               TACTGACTTCGAGTC  43 241
ND012_RS08060 NONE
ND012_RS08055 1807699 .. 1807710 -  -5.8  -3.33009   GAAAATGGCCCAGAA                GGTC TGGT GACC                 GGCAAACGTGCAATT  57 408
        hrpA 1803119 .. 1803148 - -12.2  -4.56775   ACGTCTGGCTAAAAA       TCACCGCGTAGC GAATAG ACCACGCGGTGA        ACCGTTCTGGTTTAC 100 37
ND012_RS08030 NONE
ND012_RS08025 1799547 .. 1799560 -  -2.3  -4.68528   AAAGGGAAAAAATAA               TGTGC TATG GCACT                TCTATTTTGTGCTGA  63 198
ND012_RS08020 1798666 .. 1798689 -  -7.6  -3.17325   ATTTTTCAGAATATA          GTTATGATCA GAAA TAATCATAAC           CTACCTTTCATTTTT  63 190
        sodC 1798065 .. 1798087 -  -9.9  -3.60627   TCACCTTACCTTAAA           CCACACAGC CGCTC ACTGTGTGG           TTCCAACGATGCTGA  80 59
ND012_RS08000 1795089 .. 1795100 -    -3  -3.92324   TTCGGCAAGACTAAA                TAAC CGAT GTTA                 TTACCAATGAAATTA  56 166
        pntA NONE
        pntB 1788573 .. 1788591 - -14.6  -2.62263   ATCGGCTTGATATCA             GGGCCAGT TTG ACTGGCCC             GTTCTTCCGCCTAAA 100 44
        ulaR 1782680 .. 1782694 -  -3.6  -2.96274   TTGCTCATAATCAGA               CCTTTA GGA TAAAGA               AATCAGACCAAAATG  46 28
        ulaG 1781552 .. 1781581 -   -10  -4.27297   AATAGAACAGATAAA       GCAGACGAGGAA TTAACT TCCCGCGTCTGC        GCACCATCAATGTCC  93 49
        sbmC 1777909 .. 1777934 -  -2.5  -3.78953   AGGTTTACGACCAAA         GTCGTGCG-GGT AAA ACCACGGATGAC         TTTGGTGGTCCCCAT  52 40
ND012_RS07920 1775171 .. 1775187 -  -4.4  -4.83615   TATCCGTTATAAAAA              CAACCG CTAGC CGGTTA              CCGACCTCAGAAACC  71 43
        yjjG 1774375 .. 1774385 -  -6.8  -3.08015   TTAATCAGGCTAATA                 GCAG TTG CTGC                 AATTCAGACAAAGAA  59 4
ND012_RS07905 1772738 .. 1772754 -  -2.3  -3.06815   ATTGTCCGCAATAGA              TATATCA GGT TGATTTA              GCACCAGAAATAGAA  42 23
ND012_RS07900 1771257 .. 1771280 - -13.9  -4.09685   CTTCATGCTCCAAAA          GGAGCCAGC CGAAAC GCTGGCTCC           TTACCGATTTTAACG 100 41
ND012_RS07895 1770155 .. 1770168 -  -3.8   -3.0579   AAACCGGCTGAAAAT               TGGG GTTCTG CCCA                GCGTCTGACACGGTT  47 334
ND012_RS07875 1761201 .. 1761213 -    -2   -4.0056   ACAAAGAGCGAGAAA                TTGA GCTAA TCAA                CAAGTATAACTCTTT  55 505
ND012_RS07855 1757577 .. 1757592 -    -4  -4.27001   TAATAAAAAATAGAA              TTGATG CTGG CACCAA               AAAAACACGGGTGCC  63 177
        ydfG 1756473 .. 1756487 -  -2.8  -3.04122   CCTCACCAGAAATCA               CAAAAC CGC GGTTTG               TCAGCAGCCTGAGCG  43 69
ND012_RS07840 1755392 .. 1755406 -  -4.3  -3.84825   CTTATGTAGAGTAAA               TAGGT TATAT ACCTA               ATAAACCGTTCAGCC  57 84
ND012_RS07835 1755074 .. 1755090 -  -5.8  -5.59534   AAGGATAAGAAAAAA              GGCACC ACCTG GATGCC              TGAAATCGGAAATCA  95 57
        clcB 1753367 .. 1753382 -  -6.8  -2.77899   CGGTTGTATTAATCA              CGCGAT ATTA ACCGCG               CAGGCAATTATTAAC  54 266
         tus 1749536 .. 1749554 -  -7.4  -3.67877   ATGTGGCAATAAATA             TTGGCGGA GCC TCCGGCAA             CTTTGAACTGAATGT  67 507
        manA 1746782 .. 1746795 -  -3.7  -3.79906   TCACGGGCACAATAA               CGCCC CAAA GCGCG                CTATTGTGAAGGTAA  56 87
ND012_RS07800 1745157 .. 1745178 - -10.9  -5.73339   ATAACGATAAAAAAA           GCCAGTCAC TTTT ATGACTGGC            TTGTTAATGTAACGA 100 49
         add 1743931 .. 1743955 -  -8.6  -4.25104   TTGCCGTGACTAAAA          CAGGATCGGA TAATT TACGATCCTG          TTTTAGCTATTTGTT  82 54
ND012_RS07775 1738211 .. 1738229 -  -8.1  -4.00066   TTCATAATTCATAAA             TGGCCGA ATAAA CCGGCCA             GCAGGGTATTAGCTT  74 34
ND012_RS07770 1737637 .. 1737662 -    -9  -5.55855   CCTAAAAAAATAAAA         GCCGCCTATT ATCCAA AATTGGCGGC          CGAACGACAACAGAT 100 99
        rsxA NONE
        rsxB 1736415 .. 1736428 -  -4.5  -3.89435   GGTAAATAACTTAAA               CATGG TGCT CCACG                TCGATCAATTTCACT  59 7
        rsxC 1734378 .. 1734405 - -12.8  -2.78384   TTCGTCGCCATGATA        TTCACCACCCTG ATAG CAGGGCGGTAAA         TGGGAACTCATAGCC  91 40
        rsxD NONE
        rsxG NONE
ND012_RS07735 NONE
         nth 1729697 .. 1729713 -  -4.4  -4.05678   CCCCTAAATAAAACA              GGACAT ACGGG ATGCCC              ACGATAAGCCAAATA  59 176
ND012_RS07725 1727594 .. 1727622 -  -8.3  -5.84432   TATAACACAAAAAAA       CCGTG-AGATAG TTGGGG CTATCTGCACGG        TTTTTTGACAATTTA 100 50
ND012_RS07720 1725341 .. 1725363 - -11.3  -4.27584   ACGTCGAAGGCAAAA           CGCCTCACG GACAA CATGAGGCG           TTACGGTGTCACTTG 100 127
        osmB 1723528 .. 1723538 -  -4.6  -2.77235   CCAATCACCCAATCA                 GCCG ATC CAGC                 GCAAACCCTGCGTGA  47 485
ND012_RS07695 1722135 .. 1722150 -  -6.1  -4.75776   AAGCGAATGCAAAAA              GAGCG ACCAAG CGCTC               TTTTTTTTGATGCCT  80 84
ND012_RS07690 1721574 .. 1721588 -   -10  -3.86015   TATCGTTGCCATAAA               TGCGGT TTT ACCGCA               CATTCATTGTATTGG  79 166
        ribA 1718227 .. 1718244 -  -8.3  -4.42639   ACACTGTAACGAAAA             GGGTGGG CTGG CCCCCCC              TTTTTTGCTGACAGA  87 55
ND012_RS07635 1707969 .. 1707990 - -11.5   -4.4768   TATTAATAGAAGAAA           GCAGGGGGC TGAT GCCCCCTGT            TATTTTATGACGCTC 100 79
ND012_RS07625 NONE
        cobO 1704827 .. 1704844 -  -6.9  -3.92075   AGCTGGATGTAGAAA             CCGTCAG CAAA CTGCCGG              TTGAAAAAGATCGTC  66 339
ND012_RS07600 NONE
ND012_RS07595 NONE
        trpD NONE
       trpCF 1697382 .. 1697392 -  -5.4  -3.14344   TATCGGGTTCACCAA                 TAGC AAA GCTA                 TTCTGATTAATACGC  53 32
        trpB NONE
        trpA 1695276 .. 1695304 - -10.2   -5.2189   CGAATCAGGAAAAAA        CCGCGCCGGAGT GATTG AGTCGGGCGCGG        TGACGTGTCTGTGTG 100 67
ND012_RS07570 1694665 .. 1694685 - -10.4  -2.75708   TCTGGTTAAAAAAGG            GGAGGCGC ATTCG ACGCCTCC            TTTATTTATTGTTGA  75 68
ND012_RS07560 NONE
ND012_RS07555 1692441 .. 1692453 -  -3.4  -3.15544   TTTCATCGCTACCAA                CACT TGTTC AGTG                CCTTGCGACTCTTTT  46 39
ND012_RS07545 1689797 .. 1689817 -  -3.9  -2.83822   TTCACGCCATAATGA            GTCGCCC TGAAGGT GGGCGAG            TATCAAATCAATCCT  45 33
        yciA 1689273 .. 1689300 -   -15   -5.1675   TCAGTCATTAAAAAA        GGGTCGCATGTGA ATT TCAC-TGCGACCC        TTTTACATTTGTCAC 100 57
ND012_RS07500 NONE
ND012_RS07495 1679531 .. 1679543 -  -3.4  -2.59564   GTTTGATTTGATAAC                GGAT TAGTG ATCC                TATTTATCGTCAGTA  42 25
ND012_RS07485 NONE
ND012_RS07480 1677524 .. 1677535 -  -2.2  -4.19817   GCGAGCGAGTCAAAA                CGCA TGGG TACG                 CATTGCAGACGGCTT  55 56
         cls NONE
ND012_RS07455 1673678 .. 1673703 - -11.1  -5.09426   TTTAATGGCAAAAAA         GCCCCGCCATT TTGC ACTGGCAGGGC          TTTTTTCTTATTTTT 100 82
ND012_RS07415 1664424 .. 1664445 -  -8.9  -3.19642   ATTATTAGGTATGAA           TTTTGTGAT TTAA ATCACAAAA            ACATCAAGCTGACAC  69 187
        adhE 1661415 .. 1661445 - -19.9  -5.01422   GGACACAAAAAGAAA       CCCCCTCAATCAG GAAGG CTGATTGAGGGGG       TGGATAATCTACCTA 100 79
         hns 1659384 .. 1659407 -  -5.2   -5.4756   AAGCTTAATAAAAAA          TACCCTCAAC ATAA GAAGAGGGTA           TTTCTCGGATAATAG  87 58
ND012_RS07380 1653768 .. 1653782 -  -4.2  -2.60392   TATTGCGTAATTAAT               GGCG TTTTACG CGCC               GATTATCCGCAACAT  45 28
        purU 1652833 .. 1652852 -  -2.2  -3.53091   AGGTGTTTCTTCAAA            CAAAAAAT AACG ATTTATTG             AGCAGTTACAGAATG  47 31
ND012_RS07370 NONE
ND012_RS07365 NONE
ND012_RS07360 1651970 .. 1651990 -  -5.6  -4.23298   GAAATTGAAAAAATA            TGTATTAA CACCT TTAATACA            ACTCCTCGCAGGGGG  68 309
ND012_RS07350 1649767 .. 1649792 -  -3.4  -2.78715   AAGTGGGGGATCATA         CGTCTAAT GGCTAAAAAA ATTAGACG          TGTTCAATACGACTT  43 55
        xthA 1648846 .. 1648882 -  -7.9  -3.03159   CGAAGTTTGTCAACA    GTCTGAGCCCGTGCTGT TTT ACAGCGAGAACTCCGAC    CACACCGGCGCATGA  62 7
ND012_RS07340 1647739 .. 1647756 -  -7.7  -3.06183   CGCACTGGGAGTCAA             CGCTGAC CCAA ATCAGCG              AAAAAAACTGCCGCT  60 454
        sppA 1642111 .. 1642128 - -10.5  -5.84381   GGACGAATAAAAAAA             GCCCGAC GGGT GCCGGGC              GGGATATTTATCTAT 100 56
        ansA NONE
        pncA 1640332 .. 1640349 - -11.3  -3.58343   GTTATTACCGTTAAA             CCGAGCT AATT AGCTCGG              TTTTCGTGGTATCCC  90 49
        gapA 1638010 .. 1638023 -  -9.5  -6.02919   GCAGAAATAAAAAAA               CCGCC CGGA GGCGG                TTTTTACTGATTTCT 100 52
ND012_RS07285 1636640 .. 1636658 -  -3.2  -4.70772   ATACACCGAATAAAA             TCATTAAA GTA TTTAATGG             TTCGGATATGGTGGA  69 328
        yeaG NONE
ND012_RS07260 1629885 .. 1629902 -  -7.7  -4.77759   AGAACCCACTAAAAA             CCGACTA ACAT CAGTCGG              TTTTTTATTAGGCAG  91 46
ND012_RS07245 1625848 .. 1625858 -  -5.4  -4.99972   ATAAAATAGGAAAAA                 TGAC AAA GTCA                 TTAAATTGAGAGAAG  78 426
ND012_RS07240 1622967 .. 1623011 -    -4  -3.92542   GGTAGTGGTAAATAA TTTCAATGCTAATTAATTA TCCATTTT CAATTAATC-GCATTGAAA GGCGAGCCTCCAGTG  59 166
ND012_RS07235 1622242 .. 1622254 -  -7.7   -2.6652   GAAAAGTCAATTAAT                GTGAC CAC GTCAC                GTTTCTTCGACTTTG  60 296
ND012_RS07230 1620942 .. 1620976 -  -3.5  -2.83071   AACTGAGATGGAAAG    TG-TTAATGCTGGCCG CAAC CGGCCAGCGAAAATCA     GGCAATCTTATTGAT  45 23
ND012_RS07215 1616243 .. 1616257 - -12.8  -4.36595   CAGTTAAACGCAAAA               GGGGCC GTT GGCCCC               TAGAGGTTAATGACA 100 227
        nhaB 1613603 .. 1613621 -  -3.2  -3.50877   TTAGCGGATAAAAAT             TCATCT TTAATTC AGATGA             TGGCATTCTCAGCCA  49 88
        dsbB 1612876 .. 1612930 - -21.3  -3.05963   AGTTTGACGGTAATA TTA-TTCTGAAAATGATAAAGGTGCC ATTT GGCACCTTTATCATTTTCAGAACTCA CCGTTTCTTATCGAT 100 33
        minC NONE
        minD NONE
        minE 1607620 .. 1607657 - -12.2  -2.81072   TCCAGCCAATAGAAT   TCAAGCATCCCCTGTA AATAAA TACAGGGAATGTTTGA    TATGCCGATATCATT  83 36
ND012_RS07130 1600116 .. 1600129 -  -4.5  -4.30576   TGGTTATGATCAAAA               TGGCA TAAC CGCCA                ACAGACAGAAAGCGC  66 185
ND012_RS07105 NONE
         pyk 1593477 .. 1593521 - -12.4  -3.87869   TTAATGGTGTATAAA TAAAGAAAAAGCCAGTCAAC TTCTC GCTGACTGGCTTTTTTATTA GCGATGAAAAGTTAT 100 37
        znuC NONE
        znuB 1588319 .. 1588345 -  -8.7  -4.60797   CGCGGATAGACAAAA         CAACGGGAGCC TTTTC AGCCCCCATTG         CACAACATTAACCTT 100 33
        dtpB 1586439 .. 1586468 - -10.7  -2.88249   TACAGCGGTGATATA       GCGCGGAGCCAAG CAAT CTTGACTCCGCAT        TATTTACCCTTTATT  77 66
ND012_RS07030 1579150 .. 1579169 -  -4.2  -2.76171   CGGAATAATGATAAC            CGTCAATG TCGA CACTGTCG             CTAGAAAAATAGCAG  46 220
ND012_RS07025 1578632 .. 1578648 -  -9.4  -3.38786   GAGAGGCAACATGAA              GGCGGT GATAA ACCGCC              CTAACTAACTGTTGT  74 87
        cmoA NONE
        cmoB 1576675 .. 1576702 - -14.2  -3.49475   CTCAGCCTGATATAA        CCAGCCCCGAAA ATGT TTCCGGGGCTGA         TTTACCGCCAGCAAC 100 46
        argS 1572818 .. 1572831 -  -9.5  -5.66229   AGTAATAATAAAAAA               GGCCC GTTA GGGCC                TTCAGACTGCGGACA 100 243
        mdtH 1560019 .. 1560032 -  -2.3    -2.702   ATTATGTCAGACAAC               GGGCA ATAG TGCCT                CTGTAGCGAATTTCG  40 54
ND012_RS06955 NONE
ND012_RS06950 1558878 .. 1558900 - -15.6  -3.04322   GCTAATGTCTGAATA           TAGCCCGCCA TTT CGGCGGGCTA           TCGTTTTAGTCGGTA 100 31
ND012_RS06925 1553960 .. 1553973 -  -2.4  -3.46219   ATTTCATAATAAAAC               CTCT GTCCAT AGAG                ATGTGAAAAATACCC  47 328
ND012_RS06920 1553049 .. 1553061 -  -4.8   -3.5362   CAATTTGCAGAAATA                CCCT GCAAT AGGG                TGTTATTTTTGCCAG  55 28
ND012_RS06915 1552798 .. 1552830 - -19.3  -4.07568   TGCTTGGCGGCAAAA      GAAAAAGGCTCCGAC GTT GTCGGAGCCTTTTGC      TCGAATATGGCGGTG 100 33
        dauA 1549332 .. 1549360 -   -11   -5.4477   AAACGGGTAAAAAAA        GGGCGATGTAGT GAAAT ACTACGCCGCCC        TTTTTTCATGCTCTG 100 44
        lolB NONE
        ispE NONE
         prs 1541009 .. 1541033 - -10.8  -3.59315   GCAACCATCGGCAAA         CT-TGCAGCGC CAAG GCGCTGCAGAG          AGTGATTAATGTTCA  84 31
         pth 1539586 .. 1539622 -  -8.2  -2.72839   AATTATTGGCAATGA   TGACCGATTCTCCGGC TATTGGT GCCGGAGAATC-G-CA   ATTTAGGCGTTGGCT  63 28
        ychF 1537667 .. 1537684 - -11.3  -5.15526   ATATAAAAGGAAAAA             TCCACGC AATT GCGTGGA              TTTTATGAGTTTTTA 100 88
ND012_RS06775 1523293 .. 1523312 -    -5  -3.11281   GTACTTAAAATGACA            TTTCGACA TTTA TGTCGGAA             TTGGTTTCAGTCGAT  51 95
ND012_RS06770 NONE
ND012_RS06765 NONE
ND012_RS06760 1519757 .. 1519771 -  -2.1  -3.95873   GCGGGATAAAAAAAG              GTCAGG TCAG CCTG-C               GACCAGCCAGGATAC  53 17
ND012_RS06755 1517972 .. 1517989 -  -2.7  -2.71364   GCACTTTTTTAATCA             GCTTTAT CATG ATGAAGC              GTTCCTTAAAGTGGC  41 31
ND012_RS06750 NONE
ND012_RS06745 NONE
ND012_RS06740 NONE
        hycI NONE
        hydN NONE
        fdhF 1512650 .. 1512660 -  -5.4  -3.46068   GCGCGAATCCAAACA                 CATG ACT CATG                 TCAGCACTTACTGAC  57 115
        hypF NONE
ND012_RS06715 1509122 .. 1509159 - -11.9  -4.16016   TGATGGCTGAATAAA   TCGCGATCCGGTGGCTG ATTC CTACCACCGGATCGCTG    GATAGGTAAACAAGA 100 91
ND012_RS06710 1508023 .. 1508037 -    -2  -3.44334   GGAAATTAATAGTAA               TCGCCG TGG CGGTAA               TCCCAGGTAGTGAAA  47 1
ND012_RS06705 1506499 .. 1506512 -  -5.9  -2.63702   CTATCGAACAAAATG               GGCCA TTTT CGGCC                TTCCCGGGTGTTGAT  51 489
        hutC NONE
        hutI NONE
        hutG 1501851 .. 1501895 - -12.4  -3.53012   TTTCTGTGTCGGAAA TTGGTGCAT-AAAAAGCGGGG ATAT CCCCGCTTTTTTATCCACTAA AATTCGTGAAATACA 100 43
ND012_RS06640 NONE
        cydB 1488820 .. 1488844 -  -6.3  -3.28368   ACTCAAGCGAGAAGA          TGTGGGCTGGC ATC ACCAGCCCGTA          GAAAATCAGTGATAG  59 31
ND012_RS06630 NONE
        narX NONE
ND012_RS06620 1485730 .. 1485754 - -12.3  -2.76189   CAACTCATTTAAGGA          TGGACATATCA GGG CGATATGTCCA          AGACCGGGCAGAAAT  89 53
        chaA 1484396 .. 1484416 - -12.6   -4.2237   AAATTAATGCCAAAA            GGGCAAGC GCTAT GCTTGCCC            TTGTCTATCCAAACG 100 50
ND012_RS06600 1480602 .. 1480613 -  -4.4  -3.87075   ATGACTGGCGATAAA                TGTG GTGT CACA                 CGCGATTATTTGCAC  57 62
ND012_RS06560 NONE
        dcuR 1466440 .. 1466469 -    -5  -3.69256   ATGTATCCAATAGAA       GCCGCTATTG TGACCAGTTG CCATAGCGGC        CTTGGTGGTACCGGT  57 262
ND012_RS06535 1461312 .. 1461336 -  -5.5  -3.07915   CCCGATAAATGAAAT          CGATGGGCGGG AAT CAAGCCCGTCG          GATAAAGATGGATGA  53 14
ND012_RS06530 1459419 .. 1459441 -  -8.6  -3.41962   GGTTAACACATAACA           TACTCTCATT AAG AATGAGAATA           CTATTTTCGCAAGCT  71 411
ND012_RS06525 1458042 .. 1458054 -  -7.7  -3.70863   GATACATCAGGCAAA                GGGAT TTT ATCCC                CGAGAGAAAATGAAG  68 200
        rluE NONE
ND012_RS06505 1454207 .. 1454223 -  -5.1  -4.41348   TGCGCGGCAAACAAA              GCATGAT AAA ATCAAGC              GCCGGATTTTATCAC  70 110
        mnmA NONE
        hflD NONE
        purB 1450943 .. 1450965 - -13.4  -2.75844   CTGGGCAGGTGAAAG           GCAGGCGGAA AAA TACCGCCTGC           GGATAATGCTTATTT  93 35
ND012_RS06485 1450160 .. 1450170 -    -4   -2.9162   GAACCGGGTAAAGTA                 TTAC CCG GTAA                 AATAAGGGCGAAATT  47 47
        phoP NONE
        phoQ NONE
ND012_RS06470 1446633 .. 1446659 - -12.2   -5.7946   GCTTCAACAAAAAAA         CGCCCCTAAGGT AAA ACCAAAGGGGCG         TAGTTATTTCTATAT 100 56
         mfd 1436430 .. 1436443 -  -6.7  -3.94877   ACTTTCTAATAATAA               TGGCT GCCT AGCCA                TGCTATGGCTAGGCC  69 69
ND012_RS06320 1416128 .. 1416150 -   -12  -3.36965   CAAAATAATCATCAA           TCGGCGTGGT TTT AACACGCCGA           CGTTCAACTATGATT  89 115
         rne 1411033 .. 1411065 - -16.3  -5.13722   GGCAGGAAAAGAAAA      GGCCTGAGTTCTGTG AAG CACAGCGCTCAGGCC      ATATTAGTCACTCTA 100 71
        pyrC 1407450 .. 1407470 -  -9.8  -3.46534   GAATTGCAGGAAATA            GGGAAGAA ATGCG TTCTTCCC            GTGGAGAATACTTAA  78 37
        dinI 1407082 .. 1407102 - -12.5  -5.28315   ATAAAAGGCAAAAAA            GCCGAGGAG CGA CCCCCCGGC            AAAAACAGCATGACA 100 46
        bssS 1406503 .. 1406529 - -10.3  -5.07486   GAGGGCGAATAAAAA        GGCACCGAATGA GGAG TCATT-GGTGCC         TAAAGTTTTTACCCT 100 49
        solA 1405130 .. 1405142 -  -2.7  -4.18782   ATAAATTAAACTAAA                TGTCA GGA TAACA                TCTCCCATGACATCC  57 90
ND012_RS06275 1404306 .. 1404320 -  -4.3  -3.57119   TAGATAGTGTGTAAA               GATAG TTTGC CTATC               TGACCCTTTTCTGGC  52 66
ND012_RS06260 1399952 .. 1399964 -  -7.7  -2.61264   TGGCTGATTGACAAC                CCTTG TAG CAAGG                TTTTTGTTTGTAGAC  60 116
ND012_RS06255 1399413 .. 1399428 -  -4.8  -2.66321   TTCAGTAAAAGAGAG              TAAAAC GTCG GTTTTA               GGCGAATTGGGCAGG  48 204
ND012_RS06250 1397440 .. 1397461 -  -5.1  -5.67967   ACGAGCATAAAAAAA           GCCAACC TAACATCG GGCTGGC            TATTTTTCCGCATCA  91 48
        mdoC 1391115 .. 1391132 -  -6.3  -3.21099   GCTTCTCAGTACCAA             TGCCCAGT TTA AC-GGGCA             TACAGTGAGTGTTTT  57 113
ND012_RS06225 1390763 .. 1390774 -  -3.6  -2.85545   GCGGGAAGAATACGA                GGGC ATTC ACCC                 ACACCACCCATGACG  45 66
ND012_RS06220 1388789 .. 1388815 -  -9.5  -2.58544   GGCGATTGGGAGAAT         CCACAGGCA GAGTGCAAT TGCCTGTGG         CAGAGATTAGGCTTT  68 32
ND012_RS06215 1387308 .. 1387332 -  -2.8  -4.08692   CAACGGTCTTGAAAA         CCGTCG-ACGG GAAA CCGTTCGAGAG          TTCGAATCTCTCCTC  57 421
        tusE 1386651 .. 1386674 -  -8.9  -3.73402   AGATTCGTTATTAAA          CCGACTGGCC GCAGG GGCCAGT-GG          TAGTATGGGAATAAT  75 45
        rlmI 1384834 .. 1384859 - -11.9  -3.01831   TCCTGAAAAACATTA         CACTGCCTTCA TATA TGAGGGCAGTG          CAGAACATTTCAAGT  86 40
        hspQ 1384442 .. 1384459 -  -4.8   -5.9003   AAACCAATAAAAAAA             CCTGAC GCTAAA GCCAGG              TTTTTCCGCGGTATT  95 60
ND012_RS06180 1382812 .. 1382828 -  -9.5   -2.7535   TTTCCCAACAGATTA              CTGAAAC TGG GTTTCAG              TTCATAGCGGTAACG  70 101
ND012_RS06175 1382227 .. 1382241 -  -4.2  -4.04474   ACACTGGGACATAAA               CTTACC CGA GGTGAG               CTAGACTCTGGTCTG  59 98
ND012_RS06165 NONE
        yccS 1377151 .. 1377178 -  -8.4   -3.2534   AGTATGATAATTGAA        TTCGGACCGGAT TTTG AACCAGCCCGAA         TGGAGGATTAACCCT  69 33
        sulA 1375455 .. 1375467 -  -6.3  -2.80438   CCAAATAGGCAATGA                GCTTT TAT AAAGC                CAAGCCCTTGGTTAA  55 341
        ompA 1374325 .. 1374339 - -12.8  -6.15828   GGCAGCAAAAAAAAA               CCCCGC AAA GCGGGG               TTTTTTATGAAGAAG 100 46
ND012_RS06135 1371822 .. 1371837 -    -9  -2.62933   GAAGGTCGCAGATTA              GCGTAC ACTT GTACGC               TGAACAAGTCCGATC  66 39
        fabA 1370988 .. 1371006 - -11.7  -3.49777   TTCGACAGAGGATAA             CCTCCGC TTTAG GCGGAGG             TTTTCATTTCGGGCA  89 283
ND012_RS06095 1361556 .. 1361569 -  -3.9  -4.55295   GCCGTTAGAAATAAA               GAATA CGGA TATTC                AAGCTTTCGATCGGG  65 97
        pncB 1354974 .. 1355000 -  -9.4   -3.3879   AAGGTATGGGAAAGA         GACCGGGAGA GGGAAAT TCGCCCGGTC         TGAATATGGCTAACT  74 35
        asnS 1353297 .. 1353312 - -10.4  -4.76171   TAAAAAATGACAAAA              GCCAGC ATGC GCTGGC               TTTTTTTTATACAAC 100 69
        ompF 1351892 .. 1351911 - -11.4  -4.29845   CAACCCAATGCAAAA            GGCAGAGC CGAA GCCCTGCC             TTTTTTACTTACGCC 100 68
ND012_RS06060 1350350 .. 1350378 -   -11  -3.26717   AGGTAGAGAAGTCAA       GCG-TCCGCGCCA GGGA TGGCGCGGAACGA        GCCGACAAGGACGTA  81 145
        elyC 1338029 .. 1338064 -  -4.6  -2.72463   ATTCACCGTTAATCA    CACGGGA-CGATCGCGC GGT GCTTTACCGTTCCCGTG    CTTGCTTATCCCAGT  46 413
ND012_RS05990 1333361 .. 1333398 -    -5  -3.17194   ATTTGCTCAACCGAA  CTGGTGGTA-TT-TACCG GTAA CGGCAGAATTCCCACCAG   AACAGGCTGAGCAAT  50 83
        ycaO 1319145 .. 1319166 - -12.3  -4.91712   CTGAATCGATAAAAA           CAGCGATCC GTTA GGATCGCCG            TGGGTGTCAGATAAA 100 64
        focA 1317811 .. 1317821 -  -2.4  -2.90496   TTTCTTCGTAAACCA                 GACG TAG CGGC                 CACACTTTAGTGTTG  42 32
        pflB 1315310 .. 1315337 -   -15  -2.57344   GATGGTTTTGATAAG        TAAAGGCCCCAC AGTC GTGGAGCCTTTA         AGTTTATACCCTTAG 100 177
        pflA 1314325 .. 1314335 -  -5.4  -3.80858   CGATAAGTCAGTAAA                 TCAC TTT GTGA                 CCGTAACTTTCCAGT  61 7
        trxB 1303261 .. 1303286 - -11.9  -4.25538   AATAACAAATAAGAA         GGCGGCC-AACC TGA GGTTAAGCCGCC         AGTAAAAATGGCCGA 100 79
        cydD NONE
        cydC 1299282 .. 1299303 -  -5.1  -3.36327   GTAGGGTATTGATAA           TGCCGCC GTTGTTCT AGCGGCA            TTCGATAACATTAGC  55 52
         aat 1298431 .. 1298447 -  -2.2  -3.98075   ACATTATGTAAAGAA              GTGTTG GCAGT CATCAC              ACCATTTCTGCAAAA  53 98
        infA 1298056 .. 1298082 -  -7.9  -4.99665   CAAAAAAAAGCAAAA         CGCCCTAGCCA ATAAA TGGTAAGGGCG         TCGGAGGGGGACTAC  95 81
        cspD 1294630 .. 1294652 -  -9.1  -5.69262   GTATAAAAACAAAAA           TGCCAGTCG AATAG CGGCTGGCA           TTTTGAATCGCAGTG 100 50
ND012_RS05840 1290030 .. 1290048 -  -5.3  -3.65828   ATAGAAATCGTGAAA            GTGAG-CG CGAC CGTCTCAC             CATGCTTCCAGCTCC  59 178
ND012_RS05830 1287475 .. 1287505 - -17.8  -3.21747   GCACTTTATCATGAA       TCTCAGTGGGTTAT AAA ACAACCCACTGAGA       TTAAATCAAGAGAAG 100 31
         hcp 1285551 .. 1285572 - -17.3  -4.25104   TGGTGTCGAGTAAAA           GCGGCCAGC AGGT GCTGGCCGC            ATGACCTTTTAGGCC 100 34
         hcr 1284434 .. 1284460 - -13.7  -2.77135   GTTGATAAATAATAT         CTGGCAGGGAG AATCG CACCCTGCCAG         TATTGGTTGCTTCAT  93 82
        ltaE 1283103 .. 1283119 -  -3.7  -3.18657   TCAAACAGCGAAAAT              CATTACT TTC AGTTATG              TGCAGCAAGAAACTC  48 17
ND012_RS05810 1281426 .. 1281441 -    -4  -3.44622   TACCTTCATAACGAA              TTCGGT TCCC ACCAAA               AATCAGAGTGCTGCG  52 158
ND012_RS05805 1280361 .. 1280410 -  -7.9  -3.60475   AAGTGTCACGTTAAA GGCC-GCGGGTGCAGCGGGTAGA GAGGAT TCCA-CCGCTGCACCAACCGGTC AGAAGCCGCGCAGTT  70 24
ND012_RS05795 NONE
        artP 1278293 .. 1278305 -  -2.7   -3.2632   AAATTCCCAAATAGA                TATCA ATG TGACA                GATAGCTGGCAAAAG  46 15
        artJ NONE
        artQ NONE
        artM 1276100 .. 1276125 - -15.5  -3.14218   CATTCACCAAAATTA         GAAACCCCGGC AGAT ACCGGGGTTTC          AGAGCAGGCATGATT 100 47
        artJ 1274966 .. 1275002 - -12.3  -2.80195   AGCCACTACGAAGTA    CTGACGCTGTTAGTGCG ACG CGAACTGACAGCGTAAG    CGTTTATCCATTAAA  89 102
ND012_RS05725 1267109 .. 1267124 - -10.4  -4.62783   CATCGAGGTGAAAAA              GGGTGC AGAA GCACCC               TCTATTCATCTCGTC 100 75
ND012_RS05720 1265104 .. 1265118 -  -4.3  -4.41348   TTTTCGCGAAATAAA               TTAGG GTTAT CCTAA               AATCCCCGGCCAGAT  66 17
ND012_RS05715 NONE
        ybjG 1263342 .. 1263364 - -14.2  -2.56596   TTTCGCAGGAAGCGA           CACCGACAGA GAA TCTGCCGGTG           AGAGGATGGCCGAAA  93 42
        deoC 1262441 .. 1262456 - -11.8  -4.21141   TCCCAATAAAGTAAA              CCCGGC CTTA GCCGGG               TTAATAATCATTTAG 100 37
        deoR 1261626 .. 1261644 -  -5.2  -3.75153   GCCTGCCAAGGGAAA             CGACCG GAAAAAT CGGCCG             AATACTGTTCTAGTA  61 35
ND012_RS05695 1259028 .. 1259047 - -11.4  -3.40522   ACCGTGGTAGTAGAA            GCCGGTAC GATC GCACCGGC             TTTTGATGCATTAAT  86 104
ND012_RS05690 1257522 .. 1257547 - -14.7  -3.89354   TCGTTAAATGAACAA         CAGGGCCGTTG ATAA CTACGGCCCTG          TTTTATTTCAGTTTG 100 73
ND012_RS05680 1254533 .. 1254545 -  -9.1  -3.72621   TGAAATATAAATTAA                GCCAG AGC CTGGC                GGCGGACATTTAGCA  75 9
ND012_RS05675 1253309 .. 1253332 - -10.3  -2.63357   AATGACGTCAAAGAT          CAACGACCC AATGCA GGGCCGTTG           CAGGATTTCAACATT  74 54
ND012_RS05665 1250771 .. 1250786 -  -3.9  -2.79183   GTCAGTGCCACTATA              GGCCG GTTTCT CAGCC               TAAAAAAGAGGGATT  45 20
ND012_RS05660 1249952 .. 1249971 -  -2.8  -3.06696   TGGGTTTTGAATATA            TCTATCCG GATC CAGAGAGA             ATGCCGGTAAGTTGA  43 144
        hisL 1248666 .. 1248692 -   -21  -5.55769   TTGGACAACAAAAAA         GCCCTCGGAAGA TTA TCTTCCGAGGGC         TCTCTTTATGCGTTC 100 70
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE 1241436 .. 1241460 -  -2.7  -5.46657   TATCTCAATAAAAAA          CGCTCGCGA TGATCAG TCGGGGGCG          TTTTTCTTTTGCCAG  80 60
ND012_RS05585 1235426 .. 1235457 - -14.6  -2.83903   TGCGTTAAAAATGCA      TTGCCGTCAGGT GCGATAAT ACCTGACGGCAA       CAATGGCAGTTTACA 100 36
        metG 1226993 .. 1227018 - -15.5  -2.68532   GCTAAATCCAGATCA         TGCCGGTAAGG TTTT CCCTACCGGCA          AGCGATTTTTATTTG 100 34
ND012_RS05545 NONE
ND012_RS05540 1224278 .. 1224293 -  -3.3  -4.20024   ATAAAAAACATTAAA              TGAGA GATATA TCTCA               AACTTATGCCATCTT  58 70
         cdd 1223233 .. 1223262 -  -5.7  -3.17571   AAGTTGTTAATTTAA       CCGCCGGATCACAA AGT TCATGCTCCGG-GG       TTTTTATTCTGACAT  55 48
ND012_RS05525 1221646 .. 1221658 -  -4.1  -4.87318   GTTAAAAGGCAAAAA                TGGAC GAT ATCCA                CTGAGGAAACTCATG  71 135
ND012_RS05520 1219768 .. 1219794 -  -6.6  -3.35197   CTGGATAGAGATTAA         CCTGCCCACA GGTTTGA TATGGGCAGA         TTATAAGCGACTTAG  61 50
        sanA 1218830 .. 1218855 -  -5.5   -5.0538   GTTTACGGTAAAAAA         GCCAGTTGG-AT TGA ATGCTAACTGGC         TTTTTACTTTATATT  78 61
ND012_RS05475 1209287 .. 1209297 -  -2.4  -3.76952   GGGACTGAACTTAAA                 CGGC TCA GGCG                 GCTTCAATTTGCTCA  51 19
ND012_RS05470 NONE
        fghA 1207089 .. 1207128 - -11.6  -3.84712   TAACCTCAGATTAAA  TAAACCAGGTGCTCTTTA GTCA TACTGAGCACCTGATTTA   ATCGCGGGTTTGCAT  95 78
        moeA NONE
        moeB 1204593 .. 1204627 -  -6.3  -2.53263   TTCAGTCTTAATCGA    CTCTCGTTCCGCGCCA TCCC TGGCGCGGA-CGCTTG     ACTCTTCTCCCCGTC  53 106
        rhtA 1197287 .. 1197302 -  -3.2  -3.19175   GGCCAAGAGAGTGAA              GTTGCT CGCT AGCAGC               CAGATTTCATTGTGT  46 83
         tam 1196275 .. 1196321 - -12.7  -3.14978   TAATAGGAATAGATA TCTTCTACTCCGTTAATTTTCA CTGT TTAAAATCAACGGAGTAGA-GA CGCTATCTACCGACT  93 28
         dps 1195395 .. 1195413 - -10.2   -3.4158   GGGAAAAATGACGAA             GGGCCAGC GTT GCCAGCCC             CAATCATTTAATCTG  80 66
        glnH NONE
        glnP NONE
        glnQ 1192814 .. 1192850 - -12.4  -3.80569   TAAAACAGAGCGAAA   TA-CCTTGCGGGAGGCA TGAT TGTCCCCCGCAAGGCTA    ATTTATCAGGATACG 100 31
        ompC 1186959 .. 1186974 - -10.4  -5.61596   ATTGTCATAAAAAAA              CCGGGA ATAA TCCCGG               CGAATGATTTGAAAA 100 78
        yedA NONE
ND012_RS05370 1184996 .. 1185008 -  -4.1  -4.02534   AGTGAAATGGATAAA                CTCCA GTC TGAAG                CGTTCAGCAACTTAC  60 472
        sseA 1175175 .. 1175204 -  -9.3  -4.13343   ATAAATGCGGGAAAA       GAGAAGCGTGGCA CTAT TGTCACGCTTGTC        AACAAGCAGGAGTAT  85 232
        yajD 1168305 .. 1168325 - -11.9  -3.68222   CTCCAACGCTAATAA            CCGGTGAAT GAC ACTCACCGG            CCCAAAGTGGCTTAT  93 37
         dld 1165581 .. 1165609 - -13.3  -2.74322   TGTAATGGCTTAAAG        TGAATTCGCGG TGAGATG CCGCGAATTCA        GCCAGAGTTTAAAAG  93 140
ND012_RS05275 1163026 .. 1163036 -  -6.8  -2.98088   TCTGAAAGTGACAGA                 CTGC GAT GCAG                 TTATGTTAGGCCGTG  55 364
        cecR NONE
        hlyD 1158751 .. 1158778 -    -2   -2.5474   CTTCACGCATAATAT        CGCCTCTC GATTAAGGTTGT GAGAAGCG         TATGGTGACCGGCAT  39 8
ND012_RS05250 NONE
ND012_RS05245 NONE
ND012_RS05240 1154646 .. 1154667 - -13.1  -3.69434   CTAAGCAACCTGAAA           GGACACGAT TTTA ATCGTGTCC            TTTTTTATGTCTGAG 100 73
        yvcK 1149845 .. 1149863 -  -4.6  -3.05816   GCATTGGCGAGTGAA             CCAGAA ATCTTGA TTCTGG             ACGAGCCGGCTGCCG  49 370
ND012_RS05175 NONE
        bioA 1135335 .. 1135366 -  -9.3  -2.54171   ACGCGTAAAAAGTAG      CCGCCACCGCCAG TCTATT CTGGTCGCGGCGG       TATCAATGCTTTCTT  68 40
ND012_RS05140 1133136 .. 1133147 -  -4.4  -3.61654   GATACCCAGCTCAAA                TAGG GTGA CCTA                 CTCCAGGAATCCTTT  54 105
        modE 1128972 .. 1128996 -  -2.1  -3.63515   GGGTAGCGTTAAGAA          TGTCCAATCGG TAT CGGATTGAATA          CGCCGTTGTGGCCGA  50 157
ND012_RS05105 1127874 .. 1127893 - -13.6  -3.07816   GTTTCAGCCATCTAA            CCAGCAGG AATC CCTGCTGG             TTGATAAAGATTGTC 100 54
        galE NONE
        galT NONE
        galK NONE
        galM 1123153 .. 1123172 -  -3.4  -3.18264   CTTTTGAGTCAGTAA            GCGGAAGG ATTG CAATCCGC             CAGCGGCAACTAGCA  46 271
ND012_RS05080 1122516 .. 1122530 -  -5.8  -3.10409   GACTAACTTATTCAA               TGATAA CTA TTATCA               TTATATTGCGGGATG  55 304
        gpmA 1121679 .. 1121702 - -15.4  -4.22883   GAGTACTGAAAATAA          TAAACCCCGG CTTG CCGGGGTTTA           TTTATGGATACAATC 100 53
ND012_RS05065 NONE
ND012_RS05060 1116135 .. 1116158 -    -3  -3.31144   GGCTGACGGGTATAA          CCGTCGCCCTG ATG CAGG-CGCTGG          GTGCCAATGTGCAGG  47 312
ND012_RS04920 1090105 .. 1090137 - -12.1  -5.48028   TAAATAAAAATAAAA      GGTCTGAGTTCCGTA ACG TATTGAACTCAGACC      AAAAACTAGCAGCCG 100 43
ND012_RS04915 1089202 .. 1089244 -  -7.3  -4.43012   ATTTTAATATGAAAA TATCACAAGGAAAAGTGAGC GTTA GCCCATTTTTCCTT-TAATA TTCAGTGAGTTCTTT  78 59
ND012_RS04855 NONE
        kdpA NONE
        kdpB 1074558 .. 1074578 -  -5.4  -3.51924   TCGTTATTCATACAA           GCCGGA-CA ACAC TGACCCGGC            ATTAATTAGTGGATA  57 43
        kdpC NONE
        kdpD NONE
        kdpE 1070408 .. 1070420 -  -2.7  -2.66963   CATGATGAATAAGAC                CCATT AGC AATAG                AAAACCCGATGCTAC  41 150
ND012_RS04825 1069932 .. 1069954 -  -6.2  -3.39556   AAGGTGTGAATAACA           GGCAGTCC TATGGCG GGGCTGCC           TTTTTTATTCGGCTA  59 38
        ybfF 1066450 .. 1066465 -  -2.6  -4.08064   AACGCGGTGGCAAAA              TTATAG CGCG CCATAA               TACCCTAGCCGGTGA  57 166
        ybfE 1065966 .. 1065995 - -17.3  -3.56811   TAAAGAGAGTAAATA       TGGAGTGGCGTAA TGGA CTACGCCACTCCA        GCATGGTAACCGATG 100 44
        fldA 1063194 .. 1063227 - -13.9  -2.87962   GTTACAGAAAAAATT     CATGCCCTGAGTTTG AAAC CGGACTCAGGGCATG      TCGGCCAGATTAACC  95 35
         fur 1062411 .. 1062424 -  -3.1  -4.13767   TGGCCTATGTTAAAA               CCTGA TTAA TCAGA                TTTTATTTTTTGTCA  58 28
        nagB NONE
        nagA NONE
ND012_RS04750 NONE
ND012_RS04745 1048260 .. 1048278 - -11.8   -2.8352   CGTTAATGCAAGAAC             TTTGGTGC AGC GCACCAAA             AAAGGGAATCCTCGA  83 201
        asnB 1046245 .. 1046270 -  -4.5  -4.30719   GTTTCTGATAATAAA         GCAGGGCGGCC CGAA GGTAGCCCTGA          TTAAGCTTATTTACC  66 78
ND012_RS04735 NONE
ND012_RS04730 NONE
ND012_RS04725 NONE
ND012_RS04720 NONE
ND012_RS04715 NONE
ND012_RS04710 1045375 .. 1045390 -  -8.2  -5.25735   GCAAAAAAGCAAAAA              GCCCGC CGAA GCGAGC               TTTTCTAAATATGGC 100 36
        miaB 1042427 .. 1042445 -  -3.1  -3.92185   ATACATAAAAAGCAA             CCATTAG AAAGG CTATTGG             TCAAAATTAAGGCTG  56 32
ND012_RS04695 1041119 .. 1041135 -  -2.1  -2.65774   TAGATCGAGTATAAC              CTGGCTC ACG GAGCCTC              CTGCTCTGAAGGGGT  40 14
        ybeY NONE
        corC 1039678 .. 1039697 -  -2.2  -2.53164   CCACTGACGATTAAG            CAATGA AACGATAG TCATTG             AGGATTTATTCTTCC  39 31
         lnt 1038131 .. 1038155 - -12.2  -3.31144   GTTTCACTGTCATAA         TGCGGGCG-CA GAAA TGACGCCCGCA          TTGATCAGCGGTTAC  89 30
ND012_RS04675 1036432 .. 1036458 - -11.6  -6.09196   GGGAAAATAAAAAAA         TGCGGAGTGG GGAACGG CCACCCCGCA         TCCTGTCTACCAAGC 100 89
ND012_RS04670 NONE
        gltK NONE
ND012_RS04660 1034116 .. 1034139 - -14.6  -4.62069   GCCGTAGCCTAAAAA          GGCACGCCAC CCGC ATGGCGTGCC           TTCCACCCATTGACC 100 90
        leuS NONE
        lptE NONE
        holA NONE
        nadD NONE
        rsfS NONE
        rlmH NONE
        mrdA 1025529 .. 1025545 -  -2.1  -2.73681   GATGTACCCTAATCA              CCTTCAG TGC CGGGAGG              CGTCGGTGCCGCATC  41 2
        mrdB NONE
        rlpA NONE
        dacA 1021796 .. 1021813 - -12.7  -3.72405   GCTATAAAAGTATAA             CTCCCGC CTGA GCGGGAG              ATTCATATTAATTAT 100 79
        ybeD 1021179 .. 1021190 -  -4.4  -2.71322   GCAAGCGAGACATCA                TCTG GTTA CAGA                 AATGGTGGCGCCAGT  45 296
        lipB 1020395 .. 1020405 -  -2.6  -4.58395   GGCATTCGTTAAAAA                 TTTT TTG AAAA                 TTGTTTAAAAATTAT  64 125
        lipA 1019317 .. 1019349 -  -4.3  -4.41114   GGACGACATAATAAA     TG-ATCAGCCTGAA ACTGAA TTCAGGCTTATTCA      ATTATTTGACTTCTT  66 27
ND012_RS04580 1017227 .. 1017245 -  -4.6  -2.90496   CCTGTTTTTAAATGA             CACTGTAT CAA ATACATTG             AGGAAAAAAAGTGAA  50 504
        crcB 1016276 .. 1016295 -  -7.8  -4.62302   CAATATTCTTAAAAA            CCCGCC TCAACACT GGCGGG             TTTTTTATTGCCCGA  86 371
ND012_RS04560 1015233 .. 1015261 - -12.6   -4.1673   TAACTGTTGAAGAAA       CTCAGTCCCCATA GTGC TATGGGG-CTGAG        TAGGCACAGAAGGCA 100 44
ND012_RS04550 1012796 .. 1012822 -  -5.8   -3.2964   AAACTTGCTTGATAA         TCATGGCACGGT AAG ACCGTGCTTTAA         ATTAACATCTTAGAA  57 155
ND012_RS04530 1009730 .. 1009741 -  -2.2  -4.91712   CTCAAGGCACAAAAA                CTCCC GAA GGG-G                CTTCCAGACGGTAAG  68 62
        folD NONE
        ybcJ  976826 ..  976854 - -12.6  -5.48054   ATTAAAACTAAAAAA       TGCGGTT-CTGAC GTAG GTCAGTAACCGCA        ATTTTTTAGCCAGAA 100 88
        ppiB  963001 ..  963012 -  -2.2  -3.21099   CGTGCGCATTACGAA                GCAA TTAT TCGC                 TAATGGTAACGCTTT  43 18
ND012_RS04330 NONE
        purE NONE
        purK  960446 ..  960468 -  -7.7  -4.92757   GCATCAACAATAAAA           CAGCGGC ATTCAGGTG GCCGCTG           TTTTTATCCGATGTA  95 81
        tesA  956641 ..  956652 -  -4.4  -2.75669   TAATAAACGATATTA                TCAG CTCA CTGA                 TATCCTGAATGAATA  46 51
ND012_RS04300 NONE
ND012_RS04295  954826 ..  954847 - -11.5  -2.73159   GTAAGTGCTGGAAAG           TGCGCGGGA AAAT TCCCGCGCG            GTGATCATTAATCAG  80 46
ND012_RS04290 NONE
ND012_RS04285  953295 ..  953334 - -11.6  -2.81872   CGGATCATAAGAGGA  TAACTGCCCATCAACAGCA AAG TGCCAT-GATGGGCGGTTA  ATTAACGAGTTATTG  81 27
        copA  949887 ..  949913 - -13.8  -3.71917   ATGCTAAACGCTAAA         TGGCGCACAAGA AAG TGTTGTGCGCCA         TTAGGTTATCGCTTT 100 43
ND012_RS04270  948838 ..  948855 -  -3.5  -5.30155   TTAGTAAGCAAAAAA             TTAATTC AATA GAATCAA              AATTATGACGTGATA  80 202
        ybaK  948243 ..  948253 -    -4  -2.87881   TAACGGGTGGATAGA                 GATT ATT AATC                 TCGTTTGGCAATATC  46 20
ND012_RS04255  944071 ..  944090 -  -9.2  -4.45485   ACCATATCGACAAAA            GGCCTGCA ATTT TGCTGGCC             TTTGTCTTTGTTAGC  95 49
ND012_RS04200  930836 ..  930851 -    -4  -2.70932   CTTTCCCCTTAATTA              CTT-GGC TAG GCCGAAG              GTTTTAGCCTGCTCA  45 7
ND012_RS04195 NONE
ND012_RS04190  928809 ..  928821 -  -4.7  -2.61831   CCCATTCGAAAAAGT                GCGGC CTC GCCGA                TATAGGTAGAGGCCG  48 65
ND012_RS04175  926906 ..  926927 - -10.3  -3.94067   CATTATAGATAATAA           CTGATGATT ACGT AATCATCAG            TTGTGCAAATGTGAC  89 47
        rsmS  926438 ..  926462 -  -4.9  -2.93941   AAGATAAACGAATGA          GGGCGAAACCA ATG CGGTTTCGTCT          TTTTTTGGGCGCGAC  50 68
ND012_RS04150 NONE
        acrB  917316 ..  917329 -  -9.5  -5.60993   TGGGGCATAAAAAAA               GCCGC GAGT GCGGC                TTTTTAAGAAGGTGA 100 56
ND012_RS04140  916921 ..  916934 -  -3.9  -3.17075   CTCGCGTTAATTTAA               TTCTT ATTG AAGAA                ACGGCCAAAACGTTG  48 8
        ykgO  916553 ..  916564 -  -3.6  -3.41798   GCTTAAAAGAAGATA                CCAG TTTA CCGG                 CTTCTATCCTGGTTA  48 215
        tomB  915040 ..  915059 -  -2.8  -4.84602   ATATAAATAAAGAAA            CATAGGGT AACG ACCCTTTA             ATTTTTCATCAGGGC  67 23
        ymoA  914680 ..  914690 -  -6.8  -3.64703   TTTGCGTGAGGCAAA                 CAGC CAT GCTG                 GTTGGCGTGAAAATG  65 137
ND012_RS04110  913632 ..  913653 - -10.3  -3.38072   GTCAGGCAACATCAA           GGTAATACA TGAG TGTATTACC            CACGCTGTTCCAGCT  78 51
        tesB  912360 ..  912381 - -14.5  -3.16556   AAAGATGATAGCGAA           GGGGCGATA ACAA TATCGCCCC            TGCAATTATTTCAAC 100 82
ND012_RS04075  904836 ..  904851 -  -4.6  -3.04144   TGGCCACTGTGAACA              GCAGGC CGTA GCCCAC               TATTTGCAACATTGG  49 174
ND012_RS04065 NONE
        queC  901333 ..  901360 -  -5.4   -3.1855   TGGCGGAAGAGTCAA        GCGTCCGCGCCA TATA TGGCGCGGAATA         AGACGACAAGGTTCT  53 106
ND012_RS04010  889275 ..  889304 - -10.1  -2.83846   GACATATAAAACCTA       TATGCTCTGCTCCA ATT TGGGGCAGAGCA-A       CGTTAAGCAACTAAC  72 44
        ampG  887751 ..  887769 - -13.2  -5.80248   GAACATATAAAAAAA             GCCGGTAT GGG ATACCGGC             TTTTTAAAGTCTCTG 100 42
ND012_RS04000  886706 ..  886738 - -10.6  -2.70017   GGTAAATTTAAATAT      CTTCCGGGGTGACT TAAAT AGTTACCCCGGAAT      TATTTAGTTAGAAAT  74 33
        cyoA NONE
        cyoB NONE
ND012_RS03985 NONE
ND012_RS03980  882510 ..  882524 -  -2.8  -3.05596   CAGCTCTTTAGTCAA               CCATCA TAT TGATGT               TGAGGTTGTACATAA  43 3
        cyoE  881551 ..  881580 -  -7.7  -3.28472   GGGTAGGAAAAATGA       CGCGGCCAAGAGG AAAT CCGTCTGGCCGCA        GTATAAATTTTTCGG  66 46
ND012_RS03970  879774 ..  879785 -  -4.4  -3.97911   ATCAAAGACAGCAAA                CTGA AGGT TCAG                 GCTCAGATCCAGGGT  60 212
        panE NONE
        yajL NONE
ND012_RS03945 NONE
ND012_RS03940 NONE
ND012_RS03935  871483 ..  871500 -  -4.2  -3.88097   TCATATAACTAATAA             CGATAA TCTTTT TTATCG              ATACCGTATTTTTTC  57 1
        xseB NONE
        ispA  868189 ..  868208 -  -3.4  -2.77899   CGGTTTCAGGAATCA            CCTGAGCA CCGG TGCGCTGG             TTGCAGATAAACATT  43 74
         dxs  866145 ..  866171 - -13.1  -3.16475   CAGGCAGAGAGTCAA        GTGTCCGCGCCA GGAA TGGCGCGGA-AC         GAGCCGACAAGGACG  95 105
ND012_RS03855  855171 ..  855181 -  -5.4  -2.81182   CTTTAATACAAAGAG                 CAAG TGG CTTG                 AGTCAAATAATCGTT  50 60
ND012_RS03850  854325 ..  854350 - -14.1  -5.31059   AGACGAAGCAAAAAA         GACCAGTCAGC ATGA ACTGACTGGTC          TTGTCTTATTCGGTT 100 65
        sbcD NONE
ND012_RS03805  839447 ..  839460 -  -3.1  -4.14511   AACTGCACTCTAAAA               GTTGA ACAC CCAAC                GGAGTAAGGCGCATT  58 300
        rdgC  836854 ..  836868 -  -2.8  -5.09762   ACCCTAATATAAAAA               CTCATC AAT GATTAG               GATGCGGGTGCCAAA  73 384
ND012_RS03745  826150 ..  826160 -  -6.8  -3.14211   ATGTTGTTTTATCAA                 CCCA AAA TGGG                 TGTTTTAACATTGGC  57 331
        pepD  818272 ..  818294 - -11.3  -5.67967   ATCACCATAAAAAAA          CGGCG-TGCC CACA GGCAACGCCG           TCTATATCACTCAAT 100 53
ND012_RS03695  815972 ..  815995 - -15.3  -2.62396   TATTCTTTGACATGA          CAGCCCGGC GCTATG GCCGGGCTG           TACTTACCTAGACTT 100 33
        dpaA  807532 ..  807553 - -12.3  -3.91084   TGACGGCCAATGAAA           CCTGGCACA AAAT TGCGCCAGG            TGAATTCGCTCTATT  91 36
        fadE  803123 ..  803148 - -16.3  -3.42503   CGCCAATATTCAGAA         GCCCTGAGTTA GCAA TAACTCAGGGC          TTCGTCGTTTCTGCG 100 265
        rnhA  801449 ..  801471 -  -8.4   -3.0353   CTTGGCATAAACAAG           GTGGGCGC TTTCTTG GCACCCAC           TTACATGCATTGGGC  63 179
        gloB  800096 ..  800106 -  -5.4  -4.57218   ATAACACAACTAAAA                 GCTT CAG AAGC                 TATCTTTCCTGGCCC  70 18
        mltD  798592 ..  798619 - -15.8  -3.50853   TTTTTTTAAGCATAA        TAAAAAGCACCC CGTA GGGTGCTTTTTA         GCAGTTATCTACTTG 100 46
        bamD  785599 ..  785622 - -15.4  -5.29445   GGGCAAGAACAAAAA          CGGCAGCTTA ACTT TAAGCTGCCG           TTTATTTTATATTGG 100 54
        raiA  784819 ..  784834 - -11.8   -5.4505   GGCGTCAATAAAAAA              CGCGCC CGAA GGCGCG               TTAGATCCTCAATAA 100 54
        pheL  784638 ..  784655 - -12.7  -5.64274   TTATGCATAAAAAAA             GCCTCCC GCTT GGGAGGC              TTGTTTGTTCGTCTT 100 50
        pheA  783389 ..  783410 -  -5.9  -3.86015   GAGGCTGGTGATAAA           GTCATCC TGTTGCTG GGATGAC            TTTTTTATGGGGGTA  63 50
        btsR  779754 ..  779764 -  -6.8  -3.73042   TTCGGTATTAAAAGA                 GGCT ATT AGCC                 AATCCTGGTTTTAAA  65 468
ND012_RS03515  778353 ..  778371 -  -5.9  -5.75342   CTTTTTTAAAAAAAA             GGGGCCA TCTTT CAGCCCC             TTACTTTTACATGAA 100 32
ND012_RS03510  777233 ..  777260 - -12.8  -3.63589   GAAAAGAGGTGCAAA        TATTAGCGTGGC CAGT GCCACGCTAAGA         GTATTTATTCACTAT 100 49
ND012_RS03480  772335 ..  772359 - -11.5  -3.33261   ATAGCGATAGATGAA          GGTTCCTGTCA GGG CAACAGGAACC          TCGCTGACGGTTGCT  86 39
ND012_RS03475  770809 ..  770822 -  -8.1  -5.06451   CATTAGCGGAAAAAA               GACGC GAGA GCGTC                TCAGACTGCGATCTC  95 220
ND012_RS03400  758388 ..  758398 -  -3.2  -4.53777   CGTAATCAAAAATAA                 GCTG TTT CAAC                 GTAGCATTACTGAAG  63 249
        fumA  756508 ..  756532 -  -7.9  -5.49729   AAGGACTTAAAAAAA          CTCCCAACAAA TAT CTTGTCAGGAG          TCAGTTAACGCTCGG 100 60
ND012_RS03390  754904 ..  754918 -   -10  -2.84794   TGAATTGCAGAACTA               TGCCAC TCA GTGGCA               ATGGTTTTATAATAA  68 138
ND012_RS03340  746309 ..  746325 -  -5.9  -3.14414   AAAGCACATTGAAGA              GCAAATA ATT TACTTGC              GCACAACCTATCATT  55 339
        mutS  742860 ..  742880 - -11.9  -5.41941   GAAATTAAATAAAAA            CGGTGAGCA TTT TGCTCACCA            TTTTTTGCTTATATT 100 162
ND012_RS03310  740319 ..  740337 -  -5.3   -3.8822   GAGAGCAAAGCCAAA             CGCTAAA ATATG TTCAGCG             TCGTGATCGCGAATT  61 141
ND012_RS03250  729820 ..  729840 - -15.5  -5.07971   GAAAAGAACGAAAAA            GGGCGATCA TAG TGATCGCCC            ATCGCTGTATTTACG 100 83
ND012_RS03240  728922 ..  728934 -  -4.8  -3.09823   CGGCCTAAAACGAGA                GTGC GGATT GCAC                GAAGGTTAAGGTACG  51 165
        queD  723711 ..  723724 -  -4.5  -4.93877   GCTGACGAAATAAAA               CATCC AGTC GGACG                GATAAGAGACATTGA  77 263
        barA  711948 ..  711969 -  -6.5  -2.94597   AAGCCGGAATTAAAG           CCGGTGACG TGAT CGTCACCAT            GAACGGTAAGGCCAT  55 497
        mtnN  708331 ..  708353 -    -7  -4.66833   TCCCAAGGTCAAAAA           GCCGCAAA GCAAGAG TCTGCGGC           AAGAGGTCAGTATTA  79 56
        btuF  707542 ..  707555 -  -3.8  -2.80779   CCAACATCAAGATGA               CTCC GAGACA GGAG                AGGGAACGCTGGCCA  45 3
ND012_RS03160  706886 ..  706906 -    -9  -5.28176   TTGAGGCATAAAAAA           CCGCG-ACC TACA GGTTCGCGG            TTTTTTTTAATCTGG 100 44
        hemL  703373 ..  703391 -  -7.4  -5.18726   GTTCGATAATAAAAA             CCCGCA GCGTCAT TGCGGG             TTTTTTATACGAAAA  90 54
        thpR NONE
        sfsA  696673 ..  696685 -  -7.7  -3.80625   CCGGTAGAACCTAAA                CCGTT AAT AACGG                CAAGCGAGCAGCGAG  72 8
        dksA  695970 ..  695995 - -14.7  -3.05844   CCCGTCATGTTAATA         CGGTGCCGGAG AAAA CTCAGGCACCG          TGTCACACGTTCTTG 100 46
      gluQRS  695005 ..  695027 -  -2.7  -4.71382   AGAACTACGGAAAAA          CAGCG-GCTA ATCA TAGCTCACCG           AGGTTCCTTTGAGAA  64 20
        pcnB NONE
        folK  692957 ..  692974 -  -2.6  -4.57341   AAGTGCGGGGAAAAA             CGACCC GAAAAT GAGCCG              AAGTTACCAGGGAGT  61 29
        panB  691881 ..  691898 -  -3.4  -3.27774   CACCCGAATCACTAA             CTGGGA TAAGCG TCCCAA              GATTCACTCGTTTGC  47 80
        panC  690739 ..  690755 -  -6.6  -3.16921   ATCAATTCGGATGAA              TAACGC AGATG GCGTTA              ACACTGAGGCATCCT  59 207
        panD  690241 ..  690270 - -12.3  -5.06103   ATAAGCGTCAAAAAA       TAAAAAGGAGCCA AAAA TGGCTCCTTTTTT        ATGAATATCAATATG 100 50
         can  686065 ..  686077 -  -5.5  -3.14931   CGGATGGGGCATTAA                CGCAA AGA TCGCG                AGGTTTCCTTCGAAC  53 72
ND012_RS03055  683051 ..  683087 -  -3.8  -3.16154   CAACATCATAGCCAA   CTCTGCCTGAGGTTGCA CGGT TG-AATTTCAGACAGAG    GTTATTGGGTAGGGT  48 42
        speE NONE
        speD  681277 ..  681300 - -13.2  -3.54424   TCTTATGGTTTTAAA          CACAGGCAGG TTAA CCTGCCTGTA           GTCAATTACACTTCT 100 31
        yddG  679963 ..  679973 -  -4.6  -3.05384   GTGGCGGGTAGTGAA                 CGCC AAT GGCA                 ATTGGTGGGGCATGA  49 224
ND012_RS03025  674579 ..  674599 - -12.6  -4.05319   AGAAAGAACATCAAA            CGGCTCCT TATTC AGGAGCCG            TTTTTACTGAAATAA 100 46
ND012_RS03000  665113 ..  665123 -    -4  -4.11216   TCTTTAGCGCGAAAA                 GTTA CAC TAAC                 AGTGATTGTCGTAGT  60 220
        nadC  662589 ..  662610 -  -5.9   -5.0133   GAGCCTCGCAAAAAA           GAGCTCA TTACTTTC TGAGCTC            TTTTTTCTATCAGGG  82 48
        ppdD NONE
        gspE NONE
        hofC  659169 ..  659188 -    -5  -3.84648   CTGAATATTATGAAA            GGACAC TGATTGAG GTGTCC             TTTTTCGTTGCCCGC  59 108
        coaE NONE
        zapD NONE
        yacG  655906 ..  655927 -  -7.3   -2.8502   AAACAAAGCGAATTA           CAGGCAGAA GAGT TTCCACCTG            CGAATCTGTCGATTG  57 160
ND012_RS02930  651518 ..  651528 -  -6.8  -3.68244   AGGACGAAGCCGAAA                 TGCC ATT GGCA                 TTTAAAGCACCGTCC  63 65
ND012_RS02845  632299 ..  632320 - -11.5  -3.15579   TGAACGCTGTAGGAA           TCCTCGCCC TTTA GGGCGGGGA            GGATGTCAAATCGGT  84 51
        tnpA  630537 ..  630560 - -16.8  -3.22409   GAATCATGAATGCAA          TCGGGCACCT AAAT AGGTGCCCGA           ATTCTATCTAAAACG 100 103
        leuA NONE
        leuB NONE
        leuC NONE
        leuD  617316 ..  617329 -  -2.3   -3.6682   GGTTATTCAGTTAAA               CGCTT TGGC ATGCG                TAATATTATGTTGCT  50 426
        sgrR NONE
        thiB NONE
        thiP NONE
        thiQ  610713 ..  610726 -  -5.2  -2.76969   TAAGGCACGGTAAAC               GCGG GCCGGA CCGC                TTGAGCATCTGGTTG  49 166
ND012_RS02750  607295 ..  607311 -  -9.5  -3.96841   CCGGAATAAACAGAA              CAACGTA CTT TACGTTG              GCAGGCAGAGTCCGT  83 145
        rapA  604173 ..  604193 - -15.5  -3.80858   TGAGAATGGATCAAA            GAGCCGGAT GCG ATCCGGCTC            TTCCTGGTTCAGGTG 100 43
        rluA  603467 ..  603477 -  -3.2  -3.42347   AAATCATTTAAAAAT                 CAGC TTC ACTG                 CGAAAGTGCATTGGT  49 7
        lptD  599851 ..  599864 -  -3.7  -3.09516   TTTTCCATTATGTAA               TCCGC AGTT GCGGG                TTTAAGTTCACTGAA  48 60
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH  595440 ..  595462 -  -6.3  -4.87291   GATCTGAATGAAAAA           TGGCACAAA TTGAT TCCGTGCCA           TTTAATCTCGTTAGA  80 46
ND012_RS02680  591437 ..  591465 -   -11  -3.21726   CGGTAGAAGAGTCAA       GCG-TCCGCGCCA GGGA TGGCGCGGAACGA        GCCGACAAGGACGTA  79 128
        rpsT  578830 ..  578859 - -14.5   -3.0806   TTTAAACTGTGAATA       TAAAAAAACCGGC CTAA GCCGGTCTTTTTA        CTAAGCAGTCAACTT 100 47
        satP  572103 ..  572124 -  -8.1  -5.97979   ATAAGAATAAAAAAA           CTCCGAATA TGAA TATTCAGAG            TTTTTTGGGATGTGT 100 88
        yaaA  565021 ..  565050 - -11.5   -4.1721   ATCGACATCGCAAAA       GCAGAAAAGGGCC GGTT GGCCCTTTTCTAT        TAATGATGACGTATT 100 60
        arcA  558458 ..  558475 -  -9.1  -6.24157   ATGGATAAAAAAAAA             CCAGCAC TTCC GCGCTGG              TTTTTTTGCCTATCA 100 46
        robA  556776 ..  556788 -  -4.7  -3.80573   TGGATTATCAGCAAA                GCCTG TGG CTGGC                ATCAGGTTGGATTGT  59 98
        yjjX  555289 ..  555304 -  -6.2  -3.01791   ACTCTCCGCTGAAGA              TAACCA GAAC TGGTTA               AGCTTTGTTGCATTG  53 367
ND012_RS02520  549843 ..  549866 - -12.4  -3.30124   TCTGAGGTTGGATAA          CCGCCCGG TTTTATTG CCGGGCGG           TAAAGTACCGTGAGG  95 43
        ettA  546874 ..  546899 - -13.3  -4.17316   ACCGCCTGAAAATAA         TACTGCCCACC GAAT GGCGGGCAGCA          TAGTCATAACTTTAT 100 47
ND012_RS02485  541432 ..  541452 -    -4  -3.54424   GCCGATGCCGCGAAA           GCGAA-AGG TATT CCTACTCGC            GTCGGTAACATTTTC  52 437
        rsmC  527803 ..  527816 -  -2.3  -5.00616   GGTTGCTGTAAAAAA               CAGCG TATC CGCTT                TGATTGTGCGGATTC  68 266
ND012_RS02415 NONE
ND012_RS02410 NONE
ND012_RS02405  527300 ..  527315 -  -2.6  -4.77036   GGGGACTATCAAAAA              CAAA-CG AAA CGATTTG              GGGATAGACTGAAAA  67 77
ND012_RS02395 NONE
        dhaR  522869 ..  522887 -  -7.4  -3.90744   TTGCTGGCTAAAGAA             CTGATGCC ATC GGCATTAG             CCAGCTTGAATCGCC  69 271
ND012_RS02340  509895 ..  509907 -  -4.8  -3.65351   TCATCCGGAGCCAAA                GTGC TGGCT GCAC                ATCAGCTACTGGCAG  57 424
ND012_RS02255  491110 ..  491136 - -14.5  -3.02471   CTTTCAGGACAGACA         CCCTTTCCGGA AACAA CCCGGAAAGGG         AAATACAGAGGAGAA 100 61
ND012_RS02135  467668 ..  467682 -   -10  -2.84794   TGAATTGCAGAACTA               TGCCAC TCA GTGGCA               ATGGTTTTATAATAA  68 509
        pepA NONE
ND012_RS02080 NONE
ND012_RS02075  450004 ..  450044 - -11.2  -4.67234   ATGCAATGCTAAAAA  GCAGCGGGTCATGATAGT GAATA ATTATCATGACCCGCGGT  TATCCCATTATGTTG 100 123
ND012_RS02070  449331 ..  449352 - -11.6  -2.57132   GTTTGGTCTCATAAG           CCCGCACT TTCTAC AGTGCGGG            TTTTTTTAATGGGTT  80 56
        argF  447574 ..  447588 -  -8.6  -3.59627   ATCAAATGGTGGAAA               CGTTCT AGC AGAACG               TCGGCATACGCCCGT  73 117
        nrdD  445162 ..  445176 -    -5  -4.16943   CCTGAGACGGTAAAA               GCTAAC CGG ATTAGC               CCAATTGGCCGCTAG  63 21
        nrdG  444588 ..  444612 -  -8.6  -5.07107   TAAAGGCGGAAAAAA         GCCTCCGCACA CGGT TG-GCGAAGGC          GAGATTTCACGGGAT 100 43
        phnG  443734 ..  443754 -  -2.6  -3.14848   TCGGGTGATTAAAAT            GACTGA GTAGTGTCA TCAGTC            TTCTCCCCGTACCAG  44 20
        phnH  443176 ..  443190 -  -2.7  -2.85874   ACATACATCAGCACA               CCTCC AGGTG GGTGG               TTCGGGGAATGGCCA  42 3
ND012_RS02035 NONE
ND012_RS02030 NONE
        phnK NONE
        phnL NONE
        phnM  438534 ..  438558 -  -2.7  -3.43328   CATCAAATAGATTAA          GCGCGCCATTA GAA TACCCGCACGC          CTTGACGCCAAACAT  48 9
        phnN NONE
        phnP  437209 ..  437219 -    -4  -4.17132   AAAGTGGCGAATAAA                 TCTT TTA AAGA                 GTGACCACTTGATTG  61 19
       speFL  435019 ..  435031 -  -3.4  -3.30006   AGCAATCCACATCAA                TGAC GAAAG GTCA                TTAATTATTGGAAAA  47 335
        speF  432696 ..  432719 - -15.4  -2.87931   TTTATCTTTCAGAGA          CTGCGGTGAT AAAT ATCACCGCAG           GTTTGAGTGTTATTT 100 66
        potE  431315 ..  431343 - -15.4  -4.24606   AAGGTAGAGGGAAAA        TGCGGACGGCAA GAAGA TTGCCGTCCACA        AAACGGTTTACTTTG 100 33
ND012_RS01975  430385 ..  430408 -  -7.4  -2.68545   GCCGGACAACAAGAG          GGCACGGAAA AAGT TTCCCGTGTC           ATGGTGTCGTGTTGA  58 524
ND012_RS01960 NONE
ND012_RS01955  427683 ..  427706 -   -11  -5.63645   GTAAAATATAAAAAA          GGGAGAGGCA GCGA TGTCTCTCCC           GATATATTCTGTTAT 100 50
ND012_RS01940  423104 ..  423119 - -10.4  -5.15167   GATGAGTAATAAAAA              CCAGCC TTCG GGCTGG               TTTTTTTACGCCTAT 100 56
        yhbY  404467 ..  404494 - -12.8  -4.86731   TTTTTGTAAAGAAAA        GAAAAAAGGCCG CAAG CGGCCTTTTATC         GGAACAAAGTGCATG 100 67
        dacB NONE
        pmrA NONE
        pmrB  400476 ..  400492 -  -7.9  -4.67904   CATTAACCCCAAAAA              GGCTGCC TAT GGCAGCT              TTTTTTGTTATTTTT  86 47
        ispB  396237 ..  396248 -  -5.8  -2.74784   ATTTCTTAAAATTGA                CGCT GTAC AGCG                 ATATGTGCCAACCCT  53 4
ND012_RS01795  394906 ..  394929 - -19.6  -3.18264   TCCTGTATTGATGAA          CCGCCGGTGG TTGC CCACCGGCGG           TTTTTTTATGACGGC 100 31
        argR  392799 ..  392816 - -14.1  -3.65001   TAGATTAGATAAACA             GCCCCCG GCAG CGGGGGC              AACAGGGTTCGCTGG 100 177
         fbp  390189 ..  390208 - -13.6  -5.94713   ATCGGATAAAAAAAA            CAGCGACC TGAT GGTCGCTG             TTTAATTGCATGGAT 100 53
         ppa  389296 ..  389314 - -14.6  -5.46698   TTGAAAATGAAAAAA             CACCGCTC ATT GAGCGGTG             TTTTTTTGTCGAGCC 100 50
        msrA  382396 ..  382416 -    -4  -4.75518   CATATAAAATTAAAA           TGGCGAGCA GGAA CGCT-GCCA            TCGGGCTGAGTGAAC  71 83
ND012_RS01745  380937 ..  380961 - -15.7  -3.53031   GTCACGCCAAATTAA          TTGCGGCCCCA TAT TGGGGCCGCTA          ATATTTTTAAGCTAG 100 59
ND012_RS01735 NONE
ND012_RS01725  376539 ..  376554 -  -4.6  -4.84539   GAATGAAAGATAAAA              GTGCTC GGCT GAGCGC               TTGAGGTTAATGACA  74 222
        ytfE  375729 ..  375747 -  -8.8  -5.75342   TTTTTTGAAAAAAAA             GAGCGGTC AGT GATCGCTC             TTTTTCTATTATTTT 100 49
ND012_RS01710  373842 ..  373860 - -11.7  -4.11484   GTTAACCCGTCAAAA             CGCCAGC CTCGT GCTGGCG             TTTTGCTTTTAAGGG 100 223
ND012_RS01685  371557 ..  371580 -  -5.8   -3.1733   TTGGTCATAAAATTA          CCCCGACGGC CTTG GCAGCCGGCG           CACGCTTCTTCAGCC  55 133
        bsmA  370013 ..  370041 -  -4.5  -2.78211   ATCGCGCGAAAACAT        GGCACTGGGTT GTCCATT AACCCCGTGAC        CTTTTTGCAACCAGA  47 350
        queG  344709 ..  344725 - -10.9  -2.62616   TCAGTTGGTAGAGCA              CGACCTT GCC AAGGTCG              GGGTCGCGAGTTCGA  72 379
        rsgA NONE
         asd NONE
        mscM  338039 ..  338062 - -11.1  -3.04792   TCAGCAGTCTGAAGA          GCCTGATTC TTTAGG GAATCAGGC           TCTTTGTCCAAAAAT  79 54
        frdA NONE
ND012_RS01515 NONE
        frdC NONE
        frdD  333116 ..  333136 -  -8.2  -3.26841   TAAAGAAAGGGAATA            CGGCCCAC ATGGA GCAGGCCG            TTAAGAACGGAATTA  69 38
         blc  332393 ..  332413 -  -6.1  -4.80455   GATTTAAATAGAAAA            GGGCCAA CCAGTTT TCGGCCC            TTGTCGATCCTTACC  80 82
ND012_RS01490  330810 ..  330826 -  -9.4  -3.35679   GCCCTGTATGTATAA              GGGGGA ATATA TCCCCC              CTTAATAGTAAAGCG  74 52
ND012_RS01485  328365 ..  328383 -  -4.5  -2.91061   TTTTAATAAAAAACT             CCGCCGA TCGCG TCAGCGA             CACATCACCGATTGA  50 19
ND012_RS01480 NONE
ND012_RS01475 NONE
ND012_RS01470  325899 ..  325925 -  -7.2    -2.674   CTAATATGTAAAGAT         CAGCGGCAACGT ATC AGGTTGTCGCCG         CCGCTTTTACTTATA  58 36
ND012_RS01465  324813 ..  324859 - -11.8  -4.21974   CTAGCAGTTAATAAA TAAAGAACCCCAATAATTGAGT GGT ATTCGAATATTGGGGCTCTTTA CGTTTCCCATTTTTA 100 104
        epmB  323077 ..  323102 - -10.5  -3.85878   GAATAAGATCAATAA         TCAGGAGATGC CAAG GTATCTCCTGA          CCTATTTTTATGGCT  86 39
        aspA  317688 ..  317716 -    -6  -5.04601   GCCAGAAAGTAAAAA       GGCACGCT-GTCC AGAG GAATTAGCGTGCC        TTTAAGGGCTACCGG  82 50
ND012_RS01425  316292 ..  316310 -   -16  -3.23274   TGGGGGATAATTGAA             GGGGCGCA GTG TGCGCCCC             TGGAAAATGTTAGAG 100 35
        cutA NONE
ND012_RS01415 NONE
ND012_RS01410  313517 ..  313535 -  -2.5  -3.72893   CATTTCCCCATCAAA             TAAATGA CAGAT TCATTCA             GCTAAGCGCACCATT  50 23
ND012_RS01405  313148 ..  313171 - -10.2  -4.62336   ATTGTACGTGAAAAA          TCCCGCTCGC ATTA ACGGGCGGGA           TTGTCAAGAGCCTTT 100 170
         acs NONE
ND012_RS01280 NONE
        actP  283794 ..  283815 - -12.9  -3.81089   GACAGAGATGAAGAA           GCCCCCTGC TTGC GCCGGGGGC            TTTTGGCGTTTTCAG 100 281
ND012_RS01250  277279 ..  277307 -    -9  -2.87211   ATTGCGTCGGACATA        TATAGAGGGAGT TAATT ATTCCCTCTATA        TAGATAGAAATAGAA  67 59
         def NONE
         fmt  272012 ..  272027 -    -9   -5.1287   TTCATAGCCAAAAAA              GCTGAC AAAA GTCAGC               AAAATAAAGGGAAAG 100 94
        rsmB NONE
        trkA NONE
        mscL  268353 ..  268363 -  -5.4  -3.08798   AGGTGCTACTGAAGA                 CTCT ACA AGAG                 GATGATTTTTTTCAT  53 388
ND012_RS00990  244432 ..  244449 - -12.7  -5.06816   ACGCGTCAATAAAAA             GCCAGCC GCAA GGCTGGC              TTCTTTGCAATACCA 100 44
ND012_RS00965 NONE
ND012_RS00960  237819 ..  237830 -    -3  -3.05384   GCTCTGTTGAGGCAA                TAGA TTTA TCTA                 TGACATAGCTTTAAG  44 126
ND012_RS00955  236713 ..  236727 -  -7.1  -3.03441   CACTATTGGGTAACA               GACCG GTTAT CGGTC               TGAGATTTCTGAAGA  61 90
ND012_RS00945 NONE
ND012_RS00940  234566 ..  234601 -  -4.2  -3.34522   ATATTTTTCAATTAA    CTATCGAT-TTTTTTAC TCT GTAAAAAAGAACGATGG    TCATGGCCGGAGAAA  51 143
ND012_RS00935  233579 ..  233606 -   -10  -3.06302   ATCAGGTGGAGTGAA        CCAGAAGCTATT AATT AATAGCCTCTGA         GTGTATTAAATTGGG  73 64
ND012_RS00930 NONE
ND012_RS00925 NONE
ND012_RS00920 NONE
ND012_RS00915 NONE
         crp  227422 ..  227452 - -12.7  -5.45802   TTTTGAAAAGAAAAA       GCCGGTATTGTAT TAAGG ATACGATACCGGC       TTTGGGAGGAGTTAA 100 37
ND012_RS00895  225282 ..  225298 -  -9.4  -3.19293   AATCGGAAGATTGAA              GGGAGG TGGTT CCTCCC              TTTTTTAATCAGCTA  72 34
ND012_RS00875 NONE
ND012_RS00870  218956 ..  218977 -  -5.1  -3.76224   GTCTGACTTACGAAA           GTGGTGGCTG GAG CAGC-ACCGC           TTTGTGGCGCTTGGT  59 326
        tsgA  215122 ..  215151 - -14.4  -5.26119   GCGTTAAAAATAAAA       TCGCCTTCCCGCC GTATT GG-GGGAAGGCGA       TAATCACGACGTCAG 100 41
        nirB NONE
        nirD NONE
        nirC  209761 ..  209781 - -16.9   -3.6336   CTATAGCAGACAGAA            CCAGCCCTG GTG CAGGGCTGG            CGGCCATAATTATGA 100 35
        cysG  208171 ..  208195 -  -9.3  -4.26076   CCATTGCCAGCAAAA          CCAGGGACA TGTATTG CGTCCCTGG          TTTCAGACGGCGGAT  88 139
        mrcA  195249 ..  195272 - -14.6  -5.27923   TAACCGCATAAAAAA          CGGGCCAATC GTTA GACTGGCCCG           TTTCTGATGGCAGTG 100 62
ND012_RS00755  192017 ..  192035 -  -4.5  -3.16603   AGCATAGCAAAATGA             CAACCTC TGCGT GTGGTTG             ATGCGGTACCGCCGC  51 41
        yrfG NONE
        hslR  190804 ..  190827 -  -2.3  -3.53012   GTTTTCTCTCTTAAA          GGC-CGCCGG TTATT CCGACTCGCC          GTATTTAAATTTGAT  47 11
        hslO  189873 ..  189893 - -12.6  -2.68304   AAACAGCAGGAGAAT            CGGGCACA GAAGA TGTGCCCG            TAAAGGACAGAAAAA  88 41
        pckA  188049 ..  188071 - -13.5  -3.67976   GTTATTAACCGGAAA           GGGCACGAA TAGAT TTCGTGCCC           TTTTTGCATTAGCGT 100 47
ND012_RS00715 NONE
ND012_RS00710 NONE
ND012_RS00705  181864 ..  181875 -  -2.2  -3.64703   CCGGGTCTATTCAAA                CAGT GGCT ACCG                 TCAGCTTGAGATAGC  49 160
ND012_RS00700 NONE
ND012_RS00695 NONE
ND012_RS00690  177157 ..  177177 - -18.3  -5.64274   TGATGCAGAAAAAAA            GCGCCGCTG ATA CAGCGGCGC            AGCAGAACTAGCGTT 100 33
        feoA NONE
        feoB NONE
        feoC  173567 ..  173590 -   -14  -4.11404   TTTAGATGACAGAAA          GGTGATGTCA TTGC TGACATCACC           TCTTTTTTTAGCAAA 100 63
        gntX  171464 ..  171475 -  -3.6  -3.21593   TAGTCGGTTATAATA                CGCC CATT GACG                 TCGTGACTACAAGGT  48 32
        nfuA  170714 ..  170740 - -12.3   -5.0809   AAGAAAGCATAAAAA         GGGGAGCCGAT GGGTT ATTGGCTCCCC         GTTTGGTTTTCATCA 100 132
        malT NONE
        glpE  162674 ..  162695 - -11.6  -2.92175   GGGCAAGAGATCAGA           CAGAGGCC GGAAAT GGCCTCTG            CATAGGAAAAGAACG  83 45
        glpG NONE
ND012_RS00625  160740 ..  160758 -  -3.3  -2.57423   AGATCGACGAAGCGA             TATTTAT TGGTG ATAAATA             GTGTCGAAATAATAG  42 117
        glpD  158840 ..  158865 - -13.5  -3.05384   TCTCTGTCCACTTAA         TAAACCCTTTC ATTT GAAAGGGTTTA          TTGTTTGGTTTGTCG 100 156
ND012_RS00590  146859 ..  146872 -  -6.7  -3.68677   AACTGAAAAAAGACA               TTCCG TTAC CGGAA                ATTGAACAATTATTG  63 341
ND012_RS00580  144862 ..  144873 -  -2.2  -4.09864   ATGCAGCGTTTAAAA                GCTCG TGC CG-GC                CATTTTATGCCGACA  55 327
        gntT  142426 ..  142438 -  -5.5  -3.30635   CAAATTGGGGCAGAA                CGGCT AAT AGCCA                AACTGCGTGGCGAGT  54 262
ND012_RS00555  139789 ..  139799 -  -5.4  -2.57795   CTCATCATCAATTCA                 CACT GTG AGTG                 ACTATTTTGTCGGAC  49 224
        leuE  139101 ..  139121 -  -8.3  -2.59431   TTGTTGGACAAGTCA            TGGCGTC TGATTAT GACGCCA            TGTTTACTGGCAGAT  63 42
ND012_RS00545  138754 ..  138771 -  -4.1  -3.79747   TGAGCTACGACTAAA             CCGGCAT AAGC ATGCCAA              CTATTCTGAAATTCA  57 141
ND012_RS00505  131620 ..  131658 - -12.6  -3.58864   TTATCATGATAAATA   TGGACCTTGGCATCAT GCACTAA ATGATGCCAAGGCTCA   TCGCATTGGATGGCT  89 162
        pitA  124439 ..  124458 - -11.4  -5.28481   TAGCCAACTAAAAAA            GGCGACCC GATA AGGTCGCC             TTTCTATTTGTAGTC 100 63
        uspA  122945 ..  122962 - -12.7  -4.26188   GTTATATATGTAAAA             CGCCTGC ATAG GCAGGCG              TTTTAAGTAAATACT 100 55
        gdhA  121220 ..  121246 - -11.6  -4.15222   ACTTTCTCTAATAAA         CCCCGCTATTCC AGA GGAATAGCGTGA         AATGATTAGAGAAAG 100 182
ND012_RS00440  117250 ..  117263 -  -3.9  -2.60512   TGGAAGACGAAGGGA               GTTTA GCGT TAAAC                GATGATGAAAAATGC  44 136
        gorA  115649 ..  115678 - -13.6  -3.33815   ACTTTTTTTAATCAA       CTCAGCCGGAAG AAATAA CTTCCGGCTGTG        ATAGATCCGACTTTG 100 129
ND012_RS00415 NONE
        yhjD  106286 ..  106304 -  -5.9  -3.44146   TGTGGTGAGAATCAA             TCGGCGC TATGC GCGCGGA             ACAGGTGGGTTTTTA  59 13
ND012_RS00405  105234 ..  105252 -  -2.3  -2.68361   AAACCGATAAGGAAT             GGGCGCT GGTGA AACGCTC             TGATGCCTGTGCTGC  39 166
ND012_RS00395  103894 ..  103920 -    -3  -2.94218   ATTTTTTATGACACA        GGTCGGGAAAC AGATAA GTTTCCCG-CT         ATTTCATTAGTCATT  44 39
ND012_RS00390  102757 ..  102785 - -15.4  -2.69601   CGCACAGTAAATTGA       CTC-ATCGGGGCC TTTG GGCCCCGATTGAG        TTTCCTACGCAAAAC 100 64
        bcsE NONE
        bcsF NONE
        bcsG   82977 ..   83000 - -11.8  -4.68724   TCATTCAATATAAAA          CAGGAACGTA ATTA TACGCTCCTG           TTTATTGTAGATGAT 100 54
ND012_RS00270   67718 ..   67730 -  -4.8  -3.78775   CGTGCCATGAGCAAA                GAGC AGGTG GCTC                GTTTAACCTTCCCGG  57 377
ND012_RS00240   57672 ..   57688 -  -2.3  -4.00124   TATCGCATAATCAAA              TTATTAC GCG GTAATCA              TTCAACTTTTGGCAG  53 156
ND012_RS00235   57103 ..   57122 - -12.2  -3.95435   TCCTGTAAAAGACAA            GGGACATC CGAA GATGTCCC             TAATTCAGTATTAAC 100 91
ND012_RS00210 NONE
        fdhD   40881 ..   40891 -    -4  -3.14888   AATGATATTGAAAAT                 GATT ATC AATC                 CCATATTAATAGTAA  49 45
        sodA   40087 ..   40109 - -16.4  -4.96848   CGGCGGATATAAAAA           TGCCAGCAAG TCA CTTGCTGGCA           GGGTCTTTAGCAGTA 100 79
ND012_RS00160   37767 ..   37791 - -13.6  -3.40073   ACGGTGATGAAGTAA          CGGGAGCGAC TGGAT ATCGCTCCCG          TTGTCGTTTGAGTAT 100 40
        yiiM   36905 ..   36932 -  -7.8  -4.45168   GCGGTAAAACAGAAA        CCGGGTTGATG CTAGTGC CATCA-CCCGG        TTTTTTCTTTTCTTT  82 66
ND012_RS00130 NONE
ND012_RS00125 NONE
ND012_RS00120 NONE
ND012_RS00115 NONE
ND012_RS00110 NONE
ND012_RS00105   25697 ..   25709 -  -2.7   -3.5944   ATTCAGACTGCCAAA                CATCA AGC TGATA                CCGCGCAGGCGGCAT  49 424
ND012_RS00080 NONE
ND012_RS00075   19602 ..   19620 -    -6  -3.27744   AAAATAAATGCAAGA             CTGACTTT AAT AAAGGCAG             GGTTGATGATAGCAA  57 294
ND012_RS00070   17334 ..   17348 -  -8.6  -4.19336   AACTATTTTAATAAA               CCTTCA TCA TGAAGG               ATCCTGAAATTGGAA  79 17
ND012_RS00065   14757 ..   14770 -  -3.8  -2.81316   TTATCAGCGAATAAG               GCAC GGCAAT GTGC                AGAGTGAGGGGGGCC  45 80
ND012_RS00060   13725 ..   13777 -  -3.7  -2.52676   TACCGGTGCAACGTA TCGTCA-ATTCTGCCTACTGCGTGA AAACA CCA-GCAATAGGCAGAATATCAGGA TAATACTTGGTATTG  44 146
ND012_RS00055   12334 ..   12356 -  -7.7  -5.93252   GCTAAAAATAAAAAA           GGACAACGG GAGAT CTGTTGTCC           TTTTCTCGAGAATAA 100 71
ND012_RS00035    8568 ..    8578 -  -8.2  -3.07935   AGCTGACGGAGCCAA                 CGGC AGA GCCG                 CCATCTGGCGATGCG  63 156
