locus-tag class description ND441_RS00005 PF00308 Bacterial dnaA protein ND441_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ND441_RS00005 PF11638 DnaA N-terminal domain ND441_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ND441_RS00010 PF02767 DNA polymerase III beta subunit, central domain ND441_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ND441_RS00015 PF02463 RecF/RecN/SMC N terminal domain ND441_RS00020 PF01751 Toprim domain ND441_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus ND441_RS00020 PF00204 DNA gyrase B ND441_RS00020 PF18053 DNA gyrase B subunit insert domain ND441_RS00030 PF12566 Protein of unknown function (DUF3748) ND441_RS00030 PF07676 WD40-like Beta Propeller Repeat ND441_RS00035 PF07119 Protein of unknown function (DUF1375) ND441_RS00040 PF00011 Hsp20/alpha crystallin family ND441_RS00045 PF00011 Hsp20/alpha crystallin family ND441_RS00050 PF02080 TrkA-C domain ND441_RS00050 PF06826 Predicted Permease Membrane Region ND441_RS00055 PF00155 Aminotransferase class I and II ND441_RS00060 PF13488 Glycine zipper ND441_RS00060 PF00691 OmpA family ND441_RS00080 PF03352 Methyladenine glycosylase ND441_RS00090 PF02091 Glycyl-tRNA synthetase alpha subunit ND441_RS00095 PF05746 DALR anticodon binding domain ND441_RS00095 PF02092 Glycyl-tRNA synthetase beta subunit ND441_RS00100 PF11254 Protein of unknown function (DUF3053) ND441_RS00130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND441_RS00130 PF02378 Phosphotransferase system, EIIC ND441_RS00130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND441_RS00135 PF01232 Mannitol dehydrogenase Rossmann domain ND441_RS00135 PF08125 Mannitol dehydrogenase C-terminal domain ND441_RS00140 PF05068 Mannitol repressor ND441_RS00145 PF10928 Protein of unknown function (DUF2810) ND441_RS00150 PF03473 MOSC domain ND441_RS00150 PF03475 3-alpha domain ND441_RS00155 PF02203 Tar ligand binding domain homologue ND441_RS00155 PF00672 HAMP domain ND441_RS00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND441_RS00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND441_RS00165 PF02634 FdhD/NarQ family ND441_RS00175 PF09163 Formate dehydrogenase N, transmembrane ND441_RS00175 PF13247 4Fe-4S dicluster domain ND441_RS00180 PF01292 Prokaryotic cytochrome b561 ND441_RS00185 PF04216 Protein involved in formate dehydrogenase formation ND441_RS00190 PF03841 L-seryl-tRNA selenium transferase ND441_RS00190 PF12390 Selenocysteine synthase N terminal ND441_RS00195 PF09106 Elongation factor SelB, winged helix ND441_RS00195 PF00009 Elongation factor Tu GTP binding domain ND441_RS00195 PF09107 Elongation factor SelB, winged helix ND441_RS00195 PF03144 Elongation factor Tu domain 2 ND441_RS00200 PF01427 D-ala-D-ala dipeptidase ND441_RS00205 PF07690 Major Facilitator Superfamily ND441_RS00210 PF01757 Acyltransferase family ND441_RS00220 PF13356 Arm DNA-binding domain ND441_RS00220 PF14659 Phage integrase, N-terminal SAM-like domain ND441_RS00220 PF00589 Phage integrase family ND441_RS00230 PF04606 Ogr/Delta-like zinc finger ND441_RS00255 PF17392 Urocanase C-terminal domain ND441_RS00255 PF17391 Urocanase N-terminal domain ND441_RS00255 PF01175 Urocanase Rossmann-like domain ND441_RS00260 PF00221 Aromatic amino acid lyase ND441_RS00265 PF00324 Amino acid permease ND441_RS00275 PF12146 Serine aminopeptidase, S33 ND441_RS00280 PF08019 Phosphoethanolamine transferase EptA/EptB ND441_RS00280 PF00884 Sulfatase ND441_RS00285 PF00196 Bacterial regulatory proteins, luxR family ND441_RS00285 PF00072 Response regulator receiver domain ND441_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS00290 PF07730 Histidine kinase ND441_RS00290 PF05231 MASE1 ND441_RS00295 PF07690 Major Facilitator Superfamily ND441_RS00305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS00310 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS00315 PF12911 N-terminal TM domain of oligopeptide transport permease C ND441_RS00315 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS00320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND441_RS00320 PF00005 ABC transporter ND441_RS00325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND441_RS00325 PF00005 ABC transporter ND441_RS00330 PF11658 Cellulose biosynthesis protein BcsG ND441_RS00335 PF11120 Cellulose biosynthesis protein BcsF ND441_RS00340 PF10995 Cellulose biosynthesis GIL ND441_RS00350 PF06564 Cellulose biosynthesis protein BcsQ ND441_RS00355 PF03552 Cellulose synthase ND441_RS00355 PF07238 PilZ domain ND441_RS00355 PF00535 Glycosyl transferase family 2 ND441_RS00360 PF03170 Bacterial cellulose synthase subunit ND441_RS00365 PF01270 Glycosyl hydrolases family 8 ND441_RS00370 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ND441_RS00375 PF00563 EAL domain ND441_RS00375 PF17154 Gammaproteobacterial periplasmic sensor domain ND441_RS00375 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS00375 PF00672 HAMP domain ND441_RS00380 PF00375 Sodium:dicarboxylate symporter family ND441_RS00385 PF00675 Insulinase (Peptidase family M16) ND441_RS00385 PF05193 Peptidase M16 inactive domain ND441_RS00390 PF00294 pfkB family carbohydrate kinase ND441_RS00395 PF01361 Tautomerase enzyme ND441_RS00400 PF00563 EAL domain ND441_RS00405 PF02611 CDP-diacylglycerol pyrophosphatase ND441_RS00410 PF03631 Virulence factor BrkB ND441_RS00415 PF03466 LysR substrate binding domain ND441_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS00420 PF00375 Sodium:dicarboxylate symporter family ND441_RS00425 PF01053 Cys/Met metabolism PLP-dependent enzyme ND441_RS00430 PF11924 Inverse autotransporter, beta-domain ND441_RS00430 PF07979 Intimin C-type lectin domain ND441_RS00430 PF02369 Bacterial Ig-like domain (group 1) ND441_RS00430 PF09134 Invasin, domain 3 ND441_RS00435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND441_RS00435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS00440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ND441_RS00445 PF01432 Peptidase family M3 ND441_RS00450 PF04445 Putative SAM-dependent methyltransferase ND441_RS00455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ND441_RS00455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ND441_RS00460 PF00582 Universal stress protein family ND441_RS00465 PF10625 Universal stress protein B (UspB) ND441_RS00470 PF01384 Phosphate transporter family ND441_RS00480 PF01810 LysE type translocator ND441_RS00485 PF00583 Acetyltransferase (GNAT) family ND441_RS00495 PF17954 Quercetinase C-terminal cupin domain ND441_RS00495 PF02678 Pirin ND441_RS00500 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND441_RS00500 PF00356 Bacterial regulatory proteins, lacI family ND441_RS00505 PF02447 GntP family permease ND441_RS00510 PF01202 Shikimate kinase ND441_RS00515 PF01914 MarC family integral membrane protein ND441_RS00520 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND441_RS00520 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND441_RS00525 PF06580 Histidine kinase ND441_RS00525 PF07694 5TMR of 5TMR-LYT ND441_RS00530 PF02806 Alpha amylase, C-terminal all-beta domain ND441_RS00530 PF00128 Alpha amylase, catalytic domain ND441_RS00530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND441_RS00535 PF00128 Alpha amylase, catalytic domain ND441_RS00535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND441_RS00535 PF18390 Glycogen debranching enzyme C-terminal domain ND441_RS00540 PF00483 Nucleotidyl transferase ND441_RS00545 PF00534 Glycosyl transferases group 1 ND441_RS00545 PF08323 Starch synthase catalytic domain ND441_RS00550 PF00343 Carbohydrate phosphorylase ND441_RS00555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ND441_RS00555 PF01266 FAD dependent oxidoreductase ND441_RS00560 PF08220 DeoR-like helix-turn-helix domain ND441_RS00560 PF00455 DeoR C terminal sensor domain ND441_RS00565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ND441_RS00565 PF01694 Rhomboid family ND441_RS00570 PF00581 Rhodanese-like domain ND441_RS00575 PF00196 Bacterial regulatory proteins, luxR family ND441_RS00575 PF17874 MalT-like TPR region ND441_RS00580 PF00343 Carbohydrate phosphorylase ND441_RS00585 PF02446 4-alpha-glucanotransferase ND441_RS00590 PF01106 NifU-like domain ND441_RS00590 PF01521 Iron-sulphur cluster biosynthesis ND441_RS00595 PF00156 Phosphoribosyl transferase domain ND441_RS00600 PF00561 alpha/beta hydrolase fold ND441_RS00610 PF09012 FeoC like transcriptional regulator ND441_RS00615 PF07664 Ferrous iron transport protein B C terminus ND441_RS00615 PF17910 FeoB cytosolic helical domain ND441_RS00615 PF02421 Ferrous iron transport protein B ND441_RS00615 PF07670 Nucleoside recognition ND441_RS00620 PF04023 FeoA domain ND441_RS00625 PF09371 Tex-like protein N-terminal domain ND441_RS00625 PF16921 Tex protein YqgF-like domain ND441_RS00625 PF17674 HHH domain ND441_RS00625 PF00575 S1 RNA binding domain ND441_RS00650 PF03449 Transcription elongation factor, N-terminal ND441_RS00650 PF01272 Transcription elongation factor, GreA/GreB, C-term ND441_RS00655 PF00486 Transcriptional regulatory protein, C terminal ND441_RS00655 PF00072 Response regulator receiver domain ND441_RS00660 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS00660 PF00672 HAMP domain ND441_RS00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS00665 PF01293 Phosphoenolpyruvate carboxykinase ND441_RS00670 PF01430 Hsp33 protein ND441_RS00675 PF01479 S4 domain ND441_RS00680 PF13419 Haloacid dehalogenase-like hydrolase ND441_RS00685 PF07095 Intracellular growth attenuator protein IgaA ND441_RS00690 PF00293 NUDIX domain ND441_RS00695 PF17092 Penicillin-binding protein OB-like domain ND441_RS00695 PF00912 Transglycosylase ND441_RS00695 PF00905 Penicillin binding protein transpeptidase domain ND441_RS00720 PF00263 Bacterial type II and III secretion system protein ND441_RS00720 PF03958 Bacterial type II/III secretion system short domain ND441_RS00725 PF01202 Shikimate kinase ND441_RS00730 PF01761 3-dehydroquinate synthase ND441_RS00735 PF05036 Sporulation related domain ND441_RS00740 PF02086 D12 class N6 adenine-specific DNA methyltransferase ND441_RS00745 PF00834 Ribulose-phosphate 3 epimerase family ND441_RS00750 PF13419 Haloacid dehalogenase-like hydrolase ND441_RS00755 PF00579 tRNA synthetases class I (W and Y) ND441_RS00760 PF14824 Sirohaem biosynthesis protein central ND441_RS00760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND441_RS00760 PF10414 Sirohaem synthase dimerisation region ND441_RS00765 PF01226 Formate/nitrite transporter ND441_RS00770 PF13806 Rieske-like [2Fe-2S] domain ND441_RS00775 PF04324 BFD-like [2Fe-2S] binding domain ND441_RS00775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND441_RS00775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND441_RS00775 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS00775 PF18267 Rubredoxin NAD+ reductase C-terminal domain ND441_RS00780 PF07969 Amidohydrolase family ND441_RS00785 PF07690 Major Facilitator Superfamily ND441_RS00800 PF00356 Bacterial regulatory proteins, lacI family ND441_RS00805 PF02056 Family 4 glycosyl hydrolase ND441_RS00805 PF11975 Family 4 glycosyl hydrolase C-terminal domain ND441_RS00810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND441_RS00815 PF00117 Glutamine amidotransferase class-I ND441_RS00820 PF00202 Aminotransferase class-III ND441_RS00825 PF12805 FUSC-like inner membrane protein yccS ND441_RS00830 PF13545 Crp-like helix-turn-helix domain ND441_RS00830 PF00027 Cyclic nucleotide-binding domain ND441_RS00835 PF02566 OsmC-like protein ND441_RS00855 PF00156 Phosphoribosyl transferase domain ND441_RS00860 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS00865 PF00485 Phosphoribulokinase / Uridine kinase family ND441_RS00870 PF06794 Uncharacterised protein family (UPF0270) ND441_RS00875 PF00561 alpha/beta hydrolase fold ND441_RS00880 PF01810 LysE type translocator ND441_RS00885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND441_RS00890 PF00535 Glycosyl transferase family 2 ND441_RS00895 PF12848 ABC transporter ND441_RS00895 PF00005 ABC transporter ND441_RS00900 PF02525 Flavodoxin-like fold ND441_RS00905 PF00999 Sodium/hydrogen exchanger family ND441_RS00905 PF02254 TrkA-N domain ND441_RS00910 PF09526 Probable metal-binding protein (DUF2387) ND441_RS00915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND441_RS00920 PF04102 SlyX ND441_RS00925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND441_RS00925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND441_RS00930 PF13309 HTH domain ND441_RS00930 PF08348 YheO-like PAS domain ND441_RS00935 PF02635 DsrE/DsrF-like family ND441_RS00940 PF02635 DsrE/DsrF-like family ND441_RS00945 PF04077 DsrH like protein ND441_RS00950 PF00164 Ribosomal protein S12/S23 ND441_RS00955 PF00177 Ribosomal protein S7p/S5e ND441_RS00960 PF00679 Elongation factor G C-terminus ND441_RS00960 PF14492 Elongation Factor G, domain II ND441_RS00960 PF03764 Elongation factor G, domain IV ND441_RS00960 PF00009 Elongation factor Tu GTP binding domain ND441_RS00960 PF03144 Elongation factor Tu domain 2 ND441_RS00965 PF00009 Elongation factor Tu GTP binding domain ND441_RS00965 PF03144 Elongation factor Tu domain 2 ND441_RS00965 PF03143 Elongation factor Tu C-terminal domain ND441_RS00970 PF04324 BFD-like [2Fe-2S] binding domain ND441_RS00975 PF00210 Ferritin-like domain ND441_RS00980 PF00338 Ribosomal protein S10p/S20e ND441_RS00985 PF00297 Ribosomal protein L3 ND441_RS00990 PF00573 Ribosomal protein L4/L1 family ND441_RS00995 PF00276 Ribosomal protein L23 ND441_RS01000 PF00181 Ribosomal Proteins L2, RNA binding domain ND441_RS01000 PF03947 Ribosomal Proteins L2, C-terminal domain ND441_RS01005 PF00203 Ribosomal protein S19 ND441_RS01010 PF00237 Ribosomal protein L22p/L17e ND441_RS01015 PF07650 KH domain ND441_RS01015 PF00189 Ribosomal protein S3, C-terminal domain ND441_RS01020 PF00252 Ribosomal protein L16p/L10e ND441_RS01025 PF00831 Ribosomal L29 protein ND441_RS01030 PF00366 Ribosomal protein S17 ND441_RS01035 PF00238 Ribosomal protein L14p/L23e ND441_RS01040 PF00467 KOW motif ND441_RS01040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ND441_RS01045 PF00281 Ribosomal protein L5 ND441_RS01045 PF00673 ribosomal L5P family C-terminus ND441_RS01050 PF00253 Ribosomal protein S14p/S29e ND441_RS01055 PF00410 Ribosomal protein S8 ND441_RS01060 PF00347 Ribosomal protein L6 ND441_RS01065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ND441_RS01070 PF00333 Ribosomal protein S5, N-terminal domain ND441_RS01070 PF03719 Ribosomal protein S5, C-terminal domain ND441_RS01075 PF00327 Ribosomal protein L30p/L7e ND441_RS01080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ND441_RS01085 PF00344 SecY translocase ND441_RS01090 PF00444 Ribosomal protein L36 ND441_RS01095 PF00416 Ribosomal protein S13/S18 ND441_RS01100 PF00411 Ribosomal protein S11 ND441_RS01105 PF00163 Ribosomal protein S4/S9 N-terminal domain ND441_RS01105 PF01479 S4 domain ND441_RS01110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ND441_RS01110 PF01000 RNA polymerase Rpb3/RpoA insert domain ND441_RS01110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ND441_RS01115 PF01196 Ribosomal protein L17 ND441_RS01120 PF13411 MerR HTH family regulatory protein ND441_RS01125 PF03889 Alternative ribosome-rescue factor A ND441_RS01130 PF01741 Large-conductance mechanosensitive channel, MscL ND441_RS01135 PF02080 TrkA-C domain ND441_RS01135 PF02254 TrkA-N domain ND441_RS01140 PF01189 16S rRNA methyltransferase RsmB/F ND441_RS01140 PF01029 NusB family ND441_RS01145 PF02911 Formyl transferase, C-terminal domain ND441_RS01145 PF00551 Formyl transferase ND441_RS01150 PF01327 Polypeptide deformylase ND441_RS01155 PF02481 DNA recombination-mediator protein A ND441_RS01155 PF17782 DprA winged helix domain ND441_RS01160 PF04361 Protein of unknown function (DUF494) ND441_RS01165 PF01396 Topoisomerase DNA binding C4 zinc finger ND441_RS01170 PF01300 Telomere recombination ND441_RS01175 PF01488 Shikimate / quinate 5-dehydrogenase ND441_RS01175 PF08501 Shikimate dehydrogenase substrate binding domain ND441_RS01175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ND441_RS01180 PF00132 Bacterial transferase hexapeptide (six repeats) ND441_RS01210 PF00474 Sodium:solute symporter family ND441_RS01215 PF04341 Protein of unknown function, DUF485 ND441_RS01220 PF16177 Acetyl-coenzyme A synthetase N-terminus ND441_RS01220 PF00501 AMP-binding enzyme ND441_RS01220 PF13193 AMP-binding enzyme C-terminal domain ND441_RS01225 PF00375 Sodium:dicarboxylate symporter family ND441_RS01235 PF04143 Sulphur transport ND441_RS01240 PF01206 Sulfurtransferase TusA ND441_RS01245 PF02719 Polysaccharide biosynthesis protein ND441_RS01250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND441_RS01255 PF02350 UDP-N-acetylglucosamine 2-epimerase ND441_RS01260 PF03102 NeuB family ND441_RS01260 PF08666 SAF domain ND441_RS01270 PF00483 Nucleotidyl transferase ND441_RS01280 PF02348 Cytidylyltransferase ND441_RS01280 PF13472 GDSL-like Lipase/Acylhydrolase family ND441_RS01305 PF02540 NAD synthase ND441_RS01305 PF00795 Carbon-nitrogen hydrolase ND441_RS01310 PF00117 Glutamine amidotransferase class-I ND441_RS01315 PF00977 Histidine biosynthesis protein ND441_RS01320 PF08485 Polysaccharide biosynthesis protein C-terminal ND441_RS01320 PF02719 Polysaccharide biosynthesis protein ND441_RS01325 PF01370 NAD dependent epimerase/dehydratase family ND441_RS01330 PF02350 UDP-N-acetylglucosamine 2-epimerase ND441_RS01355 PF11412 Disulphide bond corrector protein DsbC ND441_RS01355 PF02683 Cytochrome C biogenesis protein transmembrane region ND441_RS01360 PF03091 CutA1 divalent ion tolerance protein ND441_RS01365 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND441_RS01370 PF00206 Lyase ND441_RS01370 PF10415 Fumarase C C-terminus ND441_RS01375 PF04186 FxsA cytoplasmic membrane protein ND441_RS01380 PF00166 Chaperonin 10 Kd subunit ND441_RS01385 PF00118 TCP-1/cpn60 chaperonin family ND441_RS01390 PF13698 Domain of unknown function (DUF4156) ND441_RS01395 PF04055 Radical SAM superfamily ND441_RS01400 PF09285 Elongation factor P, C-terminal ND441_RS01400 PF08207 Elongation factor P (EF-P) KOW-like domain ND441_RS01400 PF01132 Elongation factor P (EF-P) OB domain ND441_RS01405 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND441_RS01405 PF18416 N-acetylglucosamine binding protein domain 2 ND441_RS01410 PF00196 Bacterial regulatory proteins, luxR family ND441_RS01420 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS01420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS01425 PF00577 Outer membrane usher protein ND441_RS01425 PF13953 PapC C-terminal domain ND441_RS01425 PF13954 PapC N-terminal domain ND441_RS01430 PF00419 Fimbrial protein ND441_RS01435 PF00893 Small Multidrug Resistance protein ND441_RS01440 PF08212 Lipocalin-like domain ND441_RS01445 PF02313 Fumarate reductase subunit D ND441_RS01450 PF02300 Fumarate reductase subunit C ND441_RS01455 PF13085 2Fe-2S iron-sulfur cluster binding domain ND441_RS01455 PF13183 4Fe-4S dicluster domain ND441_RS01460 PF02910 Fumarate reductase flavoprotein C-term ND441_RS01460 PF00890 FAD binding domain ND441_RS01465 PF00152 tRNA synthetases class II (D, K and N) ND441_RS01470 PF00924 Mechanosensitive ion channel ND441_RS01470 PF12795 Mechanosensitive ion channel porin domain ND441_RS01470 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND441_RS01475 PF02666 Phosphatidylserine decarboxylase ND441_RS01480 PF03193 RsgA GTPase ND441_RS01485 PF00929 Exonuclease ND441_RS01505 PF08331 Domain of unknown function (DUF1730) ND441_RS01510 PF03853 YjeF-related protein N-terminus ND441_RS01510 PF01256 Carbohydrate kinase ND441_RS01515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ND441_RS01520 PF01520 N-acetylmuramoyl-L-alanine amidase ND441_RS01525 PF01119 DNA mismatch repair protein, C-terminal domain ND441_RS01525 PF08676 MutL C terminal dimerisation domain ND441_RS01535 PF17209 Hfq protein ND441_RS01540 PF16360 GTP-binding GTPase Middle Region ND441_RS01540 PF13167 GTP-binding GTPase N-terminal ND441_RS01540 PF01926 50S ribosome-binding GTPase ND441_RS01545 PF01145 SPFH domain / Band 7 family ND441_RS01545 PF12221 Bacterial membrane protein N terminal ND441_RS01550 PF01145 SPFH domain / Band 7 family ND441_RS01555 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ND441_RS01560 PF00709 Adenylosuccinate synthetase ND441_RS01565 PF02082 Transcriptional regulator ND441_RS01570 PF17876 Cold shock domain ND441_RS01570 PF08461 Ribonuclease R winged-helix domain ND441_RS01570 PF00773 RNB domain ND441_RS01570 PF08206 Ribonuclease B OB domain ND441_RS01570 PF00575 S1 RNA binding domain ND441_RS01575 PF00588 SpoU rRNA Methylase family ND441_RS01575 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND441_RS01595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS01600 PF13953 PapC C-terminal domain ND441_RS01600 PF13954 PapC N-terminal domain ND441_RS01600 PF00577 Outer membrane usher protein ND441_RS01620 PF00326 Prolyl oligopeptidase family ND441_RS01630 PF01250 Ribosomal protein S6 ND441_RS01635 PF00436 Single-strand binding protein family ND441_RS01640 PF01084 Ribosomal protein S18 ND441_RS01645 PF03948 Ribosomal protein L9, C-terminal domain ND441_RS01645 PF01281 Ribosomal protein L9, N-terminal domain ND441_RS01650 PF04225 Opacity-associated protein A LysM-like domain ND441_RS01650 PF08525 Opacity-associated protein A N-terminal motif ND441_RS01655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND441_RS01655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND441_RS01660 PF04405 Domain of Unknown function (DUF542) ND441_RS01660 PF01814 Hemerythrin HHE cation binding domain ND441_RS01665 PF02872 5'-nucleotidase, C-terminal domain ND441_RS01665 PF00149 Calcineurin-like phosphoesterase ND441_RS01670 PF00459 Inositol monophosphatase family ND441_RS01675 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ND441_RS01680 PF06526 Protein of unknown function (DUF1107) ND441_RS01685 PF00571 CBS domain ND441_RS01685 PF03471 Transporter associated domain ND441_RS01685 PF01595 Cyclin M transmembrane N-terminal domain ND441_RS01690 PF01625 Peptide methionine sulfoxide reductase ND441_RS01695 PF01103 Surface antigen ND441_RS01695 PF17243 POTRA domain TamA domain 1 ND441_RS01695 PF07244 Surface antigen variable number repeat ND441_RS01700 PF04357 TamB, inner membrane protein subunit of TAM complex ND441_RS01705 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ND441_RS01710 PF00719 Inorganic pyrophosphatase ND441_RS01715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ND441_RS01720 PF02875 Mur ligase family, glutamate ligase domain ND441_RS01720 PF08245 Mur ligase middle domain ND441_RS01720 PF01225 Mur ligase family, catalytic domain ND441_RS01725 PF01316 Arginine repressor, DNA binding domain ND441_RS01725 PF02863 Arginine repressor, C-terminal domain ND441_RS01730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ND441_RS01730 PF00056 lactate/malate dehydrogenase, NAD binding domain ND441_RS01735 PF13693 Winged helix-turn-helix DNA-binding ND441_RS01750 PF00348 Polyprenyl synthetase ND441_RS01755 PF00829 Ribosomal prokaryotic L21 protein ND441_RS01760 PF01016 Ribosomal L27 protein ND441_RS01765 PF00892 EamA-like transporter family ND441_RS01770 PF01926 50S ribosome-binding GTPase ND441_RS01770 PF01018 GTP1/OBG ND441_RS01775 PF00672 HAMP domain ND441_RS01775 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS01775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS01780 PF00072 Response regulator receiver domain ND441_RS01780 PF00486 Transcriptional regulatory protein, C terminal ND441_RS01785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ND441_RS01790 PF01272 Transcription elongation factor, GreA/GreB, C-term ND441_RS01790 PF03449 Transcription elongation factor, N-terminal ND441_RS01795 PF01985 CRS1 / YhbY (CRM) domain ND441_RS01800 PF01728 FtsJ-like methyltransferase ND441_RS01805 PF00004 ATPase family associated with various cellular activities (AAA) ND441_RS01805 PF17862 AAA+ lid domain ND441_RS01805 PF06480 FtsH Extracellular ND441_RS01805 PF01434 Peptidase family M41 ND441_RS01810 PF00809 Pterin binding enzyme ND441_RS01815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND441_RS01815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND441_RS01815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND441_RS01815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND441_RS01820 PF03840 Preprotein translocase SecG subunit ND441_RS01835 PF02576 RimP N-terminal domain ND441_RS01835 PF17384 RimP C-terminal SH3 domain ND441_RS01840 PF13184 NusA-like KH domain ND441_RS01840 PF08529 NusA N-terminal domain ND441_RS01840 PF00575 S1 RNA binding domain ND441_RS01845 PF00009 Elongation factor Tu GTP binding domain ND441_RS01845 PF03144 Elongation factor Tu domain 2 ND441_RS01845 PF11987 Translation-initiation factor 2 ND441_RS01845 PF08364 Bacterial translation initiation factor IF-2 associated region ND441_RS01845 PF04760 Translation initiation factor IF-2, N-terminal region ND441_RS01850 PF02033 Ribosome-binding factor A ND441_RS01855 PF09157 Pseudouridine synthase II TruB, C-terminal ND441_RS01855 PF16198 tRNA pseudouridylate synthase B C-terminal domain ND441_RS01855 PF01509 TruB family pseudouridylate synthase (N terminal domain) ND441_RS01860 PF00312 Ribosomal protein S15 ND441_RS01865 PF01138 3' exoribonuclease family, domain 1 ND441_RS01865 PF00013 KH domain ND441_RS01865 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ND441_RS01865 PF03725 3' exoribonuclease family, domain 2 ND441_RS01865 PF00575 S1 RNA binding domain ND441_RS01870 PF07719 Tetratricopeptide repeat ND441_RS01870 PF13181 Tetratricopeptide repeat ND441_RS01875 PF03880 DbpA RNA binding domain ND441_RS01875 PF00270 DEAD/DEAH box helicase ND441_RS01875 PF12343 Cold shock protein DEAD box A ND441_RS01875 PF00271 Helicase conserved C-terminal domain ND441_RS01880 PF00296 Luciferase-like monooxygenase ND441_RS01890 PF03313 Serine dehydratase alpha chain ND441_RS01895 PF01136 Peptidase family U32 ND441_RS01900 PF01136 Peptidase family U32 ND441_RS01905 PF02036 SCP-2 sterol transfer family ND441_RS01910 PF13508 Acetyltransferase (GNAT) domain ND441_RS01915 PF01541 GIY-YIG catalytic domain ND441_RS01920 PF13520 Amino acid permease ND441_RS01925 PF01276 Orn/Lys/Arg decarboxylase, major domain ND441_RS01925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND441_RS01925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND441_RS01930 PF10940 Protein of unknown function (DUF2618) ND441_RS01940 PF13460 NAD(P)H-binding ND441_RS01945 PF12706 Beta-lactamase superfamily domain ND441_RS01955 PF07969 Amidohydrolase family ND441_RS01960 PF00005 ABC transporter ND441_RS01965 PF00005 ABC transporter ND441_RS01970 PF06007 Phosphonate metabolism protein PhnJ ND441_RS01975 PF05861 Bacterial phosphonate metabolism protein (PhnI) ND441_RS01980 PF05845 Bacterial phosphonate metabolism protein (PhnH) ND441_RS01985 PF06754 Phosphonate metabolism protein PhnG ND441_RS01995 PF13597 Anaerobic ribonucleoside-triphosphate reductase ND441_RS01995 PF03477 ATP cone domain ND441_RS02000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND441_RS02000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND441_RS02005 PF06877 Regulator of ribonuclease activity B ND441_RS02010 PF00583 Acetyltransferase (GNAT) family ND441_RS02015 PF08264 Anticodon-binding domain of tRNA ND441_RS02015 PF00133 tRNA synthetases class I (I, L, M and V) ND441_RS02015 PF10458 Valyl tRNA synthetase tRNA binding arm ND441_RS02020 PF04364 DNA polymerase III chi subunit, HolC ND441_RS02025 PF00883 Cytosol aminopeptidase family, catalytic domain ND441_RS02025 PF02789 Cytosol aminopeptidase family, N-terminal domain ND441_RS02030 PF03739 Lipopolysaccharide export system permease LptF/LptG ND441_RS02035 PF03739 Lipopolysaccharide export system permease LptF/LptG ND441_RS02075 PF04221 RelB antitoxin ND441_RS02080 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ND441_RS02125 PF00892 EamA-like transporter family ND441_RS02170 PF01344 Kelch motif ND441_RS02175 PF06178 Oligogalacturonate-specific porin protein (KdgM) ND441_RS02180 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND441_RS02180 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ND441_RS02180 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND441_RS02195 PF09092 Lyase, N terminal ND441_RS02195 PF09093 Lyase, catalytic ND441_RS02195 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND441_RS02195 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND441_RS02200 PF00884 Sulfatase ND441_RS02205 PF08220 DeoR-like helix-turn-helix domain ND441_RS02205 PF00455 DeoR C terminal sensor domain ND441_RS02210 PF08013 Tagatose 6 phosphate kinase ND441_RS02215 PF01380 SIS domain ND441_RS02220 PF03830 PTS system sorbose subfamily IIB component ND441_RS02225 PF03609 PTS system sorbose-specific iic component ND441_RS02230 PF03613 PTS system mannose/fructose/sorbose family IID component ND441_RS02240 PF01979 Amidohydrolase family ND441_RS02245 PF04962 KduI/IolB family ND441_RS02255 PF07470 Glycosyl Hydrolase Family 88 ND441_RS02260 PF04055 Radical SAM superfamily ND441_RS02260 PF13186 Iron-sulfur cluster-binding domain ND441_RS02265 PF00884 Sulfatase ND441_RS02275 PF01116 Fructose-bisphosphate aldolase class-II ND441_RS02285 PF10696 Protein of unknown function (DUF2501) ND441_RS02290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND441_RS02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND441_RS02310 PF00873 AcrB/AcrD/AcrF family ND441_RS02315 PF00465 Iron-containing alcohol dehydrogenase ND441_RS02320 PF02733 Dak1 domain ND441_RS02325 PF02734 DAK2 domain ND441_RS02330 PF00381 PTS HPr component phosphorylation site ND441_RS02330 PF03610 PTS system fructose IIA component ND441_RS02330 PF00391 PEP-utilising enzyme, mobile domain ND441_RS02330 PF05524 PEP-utilising enzyme, N-terminal ND441_RS02335 PF02954 Bacterial regulatory protein, Fis family ND441_RS02335 PF00989 PAS fold ND441_RS02335 PF00158 Sigma-54 interaction domain ND441_RS02340 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS02345 PF07256 Protein of unknown function (DUF1435) ND441_RS02365 PF05175 Methyltransferase small domain ND441_RS02365 PF08468 Methyltransferase small domain N-terminal ND441_RS02370 PF03603 DNA polymerase III psi subunit ND441_RS02375 PF00583 Acetyltransferase (GNAT) family ND441_RS02380 PF00009 Elongation factor Tu GTP binding domain ND441_RS02380 PF03144 Elongation factor Tu domain 2 ND441_RS02380 PF16658 Class II release factor RF3, C-terminal domain ND441_RS02385 PF04972 BON domain ND441_RS02390 PF07043 Protein of unknown function (DUF1328) ND441_RS02395 PF01734 Patatin-like phospholipase ND441_RS02400 PF01026 TatD related DNase ND441_RS02405 PF07670 Nucleoside recognition ND441_RS02405 PF07662 Na+ dependent nucleoside transporter C-terminus ND441_RS02405 PF01773 Na+ dependent nucleoside transporter N-terminus ND441_RS02410 PF01791 DeoC/LacD family aldolase ND441_RS02415 PF02885 Glycosyl transferase family, helical bundle domain ND441_RS02415 PF00591 Glycosyl transferase family, a/b domain ND441_RS02415 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ND441_RS02420 PF01676 Metalloenzyme superfamily ND441_RS02425 PF01048 Phosphorylase superfamily ND441_RS02430 PF10144 Bacterial virulence factor haemolysin ND441_RS02435 PF18429 Domain of unknown function (DUF5609) ND441_RS02440 PF18073 Rubredoxin metal binding domain ND441_RS02445 PF13521 AAA domain ND441_RS02445 PF01381 Helix-turn-helix ND441_RS02450 PF12848 ABC transporter ND441_RS02450 PF00005 ABC transporter ND441_RS02465 PF00689 Cation transporting ATPase, C-terminus ND441_RS02465 PF00690 Cation transporter/ATPase, N-terminus ND441_RS02475 PF14718 Soluble lytic murein transglycosylase L domain ND441_RS02475 PF01464 Transglycosylase SLT domain ND441_RS02480 PF01371 Trp repressor protein ND441_RS02485 PF01931 Protein of unknown function DUF84 ND441_RS02490 PF00300 Histidine phosphatase superfamily (branch 1) ND441_RS02495 PF06445 GyrI-like small molecule binding domain ND441_RS02495 PF12833 Helix-turn-helix domain ND441_RS02500 PF05981 CreA protein ND441_RS02505 PF00072 Response regulator receiver domain ND441_RS02505 PF00486 Transcriptional regulatory protein, C terminal ND441_RS02515 PF08254 Threonine leader peptide ND441_RS02520 PF03447 Homoserine dehydrogenase, NAD binding domain ND441_RS02520 PF01842 ACT domain ND441_RS02520 PF13840 ACT domain ND441_RS02520 PF00696 Amino acid kinase family ND441_RS02520 PF00742 Homoserine dehydrogenase ND441_RS02525 PF08544 GHMP kinases C terminal ND441_RS02525 PF00288 GHMP kinases N terminal domain ND441_RS02530 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS02530 PF14821 Threonine synthase N terminus ND441_RS02535 PF03883 Peroxide stress protein YaaA ND441_RS02540 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND441_RS02545 PF00994 Probable molybdopterin binding domain ND441_RS02550 PF07690 Major Facilitator Superfamily ND441_RS02560 PF01184 GPR1/FUN34/yaaH family ND441_RS02565 PF00012 Hsp70 protein ND441_RS02570 PF01556 DnaJ C terminal domain ND441_RS02570 PF00684 DnaJ central domain ND441_RS02570 PF00226 DnaJ domain ND441_RS02575 PF06965 Na+/H+ antiporter 1 ND441_RS02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS02580 PF03466 LysR substrate binding domain ND441_RS02585 PF01649 Ribosomal protein S20 ND441_RS02590 PF06574 FAD synthetase ND441_RS02590 PF01687 Riboflavin kinase ND441_RS02595 PF08264 Anticodon-binding domain of tRNA ND441_RS02595 PF06827 Zinc finger found in FPG and IleRS ND441_RS02595 PF00133 tRNA synthetases class I (I, L, M and V) ND441_RS02600 PF01252 Signal peptidase (SPase) II ND441_RS02605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND441_RS02610 PF02401 LytB protein ND441_RS02615 PF05173 Dihydrodipicolinate reductase, C-terminus ND441_RS02615 PF01113 Dihydrodipicolinate reductase, N-terminus ND441_RS02620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ND441_RS02620 PF00117 Glutamine amidotransferase class-I ND441_RS02625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND441_RS02625 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ND441_RS02625 PF02142 MGS-like domain ND441_RS02630 PF01810 LysE type translocator ND441_RS02635 PF06738 Putative threonine/serine exporter ND441_RS02640 PF12821 Threonine/Serine exporter, ThrE ND441_RS02645 PF00186 Dihydrofolate reductase ND441_RS02655 PF00149 Calcineurin-like phosphoesterase ND441_RS02660 PF04379 ApaG domain ND441_RS02665 PF00398 Ribosomal RNA adenine dimethylase ND441_RS02670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ND441_RS02675 PF00639 PPIC-type PPIASE domain ND441_RS02675 PF09312 SurA N-terminal domain ND441_RS02680 PF04453 LPS transport system D ND441_RS02680 PF03968 OstA-like protein ND441_RS02685 PF00226 DnaJ domain ND441_RS02685 PF05099 Tellurite resistance protein TerB ND441_RS02690 PF00849 RNA pseudouridylate synthase ND441_RS02695 PF18337 RapA N-terminal Tudor like domain ND441_RS02695 PF18339 RapA N-terminal Tudor like domain 1 ND441_RS02695 PF12137 RNA polymerase recycling family C-terminal ND441_RS02695 PF00271 Helicase conserved C-terminal domain ND441_RS02695 PF00176 SNF2 family N-terminal domain ND441_RS02700 PF00136 DNA polymerase family B ND441_RS02700 PF03104 DNA polymerase family B, exonuclease domain ND441_RS02705 PF09335 SNARE associated Golgi protein ND441_RS02710 PF00005 ABC transporter ND441_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS02725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS02725 PF12793 Sugar transport-related sRNA regulator N-term ND441_RS02735 PF07690 Major Facilitator Superfamily ND441_RS02740 PF00694 Aconitase C-terminal domain ND441_RS02745 PF00330 Aconitase family (aconitate hydratase) ND441_RS02750 PF00180 Isocitrate/isopropylmalate dehydrogenase ND441_RS02755 PF00682 HMGL-like ND441_RS02755 PF08502 LeuA allosteric (dimerisation) domain ND441_RS02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS02760 PF03466 LysR substrate binding domain ND441_RS02765 PF00501 AMP-binding enzyme ND441_RS02770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND441_RS02770 PF00205 Thiamine pyrophosphate enzyme, central domain ND441_RS02770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND441_RS02775 PF10369 Small subunit of acetolactate synthase ND441_RS02780 PF00356 Bacterial regulatory proteins, lacI family ND441_RS02780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND441_RS02785 PF06610 L-alanine exporter ND441_RS02790 PF02381 MraZ protein, putative antitoxin-like ND441_RS02795 PF01795 MraW methylase family ND441_RS02800 PF04999 Cell division protein FtsL ND441_RS02805 PF00905 Penicillin binding protein transpeptidase domain ND441_RS02805 PF03717 Penicillin-binding Protein dimerisation domain ND441_RS02810 PF01225 Mur ligase family, catalytic domain ND441_RS02810 PF08245 Mur ligase middle domain ND441_RS02810 PF02875 Mur ligase family, glutamate ligase domain ND441_RS02815 PF02875 Mur ligase family, glutamate ligase domain ND441_RS02815 PF08245 Mur ligase middle domain ND441_RS02815 PF01225 Mur ligase family, catalytic domain ND441_RS02820 PF00953 Glycosyl transferase family 4 ND441_RS02820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ND441_RS02825 PF02875 Mur ligase family, glutamate ligase domain ND441_RS02825 PF08245 Mur ligase middle domain ND441_RS02830 PF01098 Cell cycle protein ND441_RS02835 PF04101 Glycosyltransferase family 28 C-terminal domain ND441_RS02835 PF03033 Glycosyltransferase family 28 N-terminal domain ND441_RS02840 PF01225 Mur ligase family, catalytic domain ND441_RS02840 PF02875 Mur ligase family, glutamate ligase domain ND441_RS02840 PF08245 Mur ligase middle domain ND441_RS02845 PF07478 D-ala D-ala ligase C-terminus ND441_RS02845 PF01820 D-ala D-ala ligase N-terminus ND441_RS02850 PF08478 POTRA domain, FtsQ-type ND441_RS02850 PF03799 Cell division protein FtsQ ND441_RS02855 PF02491 SHS2 domain inserted in FTSA ND441_RS02860 PF12327 FtsZ family, C-terminal domain ND441_RS02860 PF00091 Tubulin/FtsZ family, GTPase domain ND441_RS02865 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ND441_RS02875 PF06558 Secretion monitor precursor protein (SecM) ND441_RS02880 PF02810 SEC-C motif ND441_RS02880 PF07517 SecA DEAD-like domain ND441_RS02880 PF01043 SecA preprotein cross-linking domain ND441_RS02880 PF07516 SecA Wing and Scaffold domain ND441_RS02885 PF00293 NUDIX domain ND441_RS02890 PF03884 DNA gyrase inhibitor YacG ND441_RS02895 PF07072 Cell division protein ND441_RS02900 PF01121 Dephospho-CoA kinase ND441_RS02905 PF00478 IMP dehydrogenase / GMP reductase domain ND441_RS02910 PF00482 Type II secretion system (T2SS), protein F ND441_RS02915 PF00437 Type II/IV secretion system protein ND441_RS02915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ND441_RS02920 PF07963 Prokaryotic N-terminal methylation motif ND441_RS02925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ND441_RS02925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ND441_RS02930 PF01510 N-acetylmuramoyl-L-alanine amidase ND441_RS02935 PF17113 Regulatory signalling modulator protein AmpE ND441_RS02940 PF00324 Amino acid permease ND441_RS02945 PF07729 FCD domain ND441_RS02945 PF00392 Bacterial regulatory proteins, gntR family ND441_RS02950 PF17831 Pyruvate dehydrogenase E1 component middle domain ND441_RS02950 PF00456 Transketolase, thiamine diphosphate binding domain ND441_RS02955 PF02817 e3 binding domain ND441_RS02955 PF00364 Biotin-requiring enzyme ND441_RS02955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND441_RS02960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND441_RS02960 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS02970 PF00330 Aconitase family (aconitate hydratase) ND441_RS02970 PF11791 Aconitate B N-terminal domain ND441_RS02970 PF06434 Aconitate hydratase 2 N-terminus ND441_RS02975 PF06062 Uncharacterised protein family (UPF0231) ND441_RS02980 PF00892 EamA-like transporter family ND441_RS02985 PF02675 S-adenosylmethionine decarboxylase ND441_RS02990 PF17284 Spermidine synthase tetramerisation domain ND441_RS02995 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND441_RS03000 PF07732 Multicopper oxidase ND441_RS03000 PF07731 Multicopper oxidase ND441_RS03000 PF00394 Multicopper oxidase ND441_RS03000 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND441_RS03005 PF00156 Phosphoribosyl transferase domain ND441_RS03010 PF00484 Carbonic anhydrase ND441_RS03015 PF00005 ABC transporter ND441_RS03020 PF01061 ABC-2 type transporter ND441_RS03025 PF01522 Polysaccharide deacetylase ND441_RS03030 PF02261 Aspartate decarboxylase ND441_RS03035 PF02569 Pantoate-beta-alanine ligase ND441_RS03040 PF02548 Ketopantoate hydroxymethyltransferase ND441_RS03045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ND441_RS03050 PF12627 Probable RNA and SrmB- binding site of polymerase A ND441_RS03050 PF12626 Polymerase A arginine-rich C-terminus ND441_RS03050 PF01743 Poly A polymerase head domain ND441_RS03055 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND441_RS03060 PF01258 Prokaryotic dksA/traR C4-type zinc finger ND441_RS03065 PF03749 Sugar fermentation stimulation protein RE domain ND441_RS03065 PF17746 SfsA N-terminal OB domain ND441_RS03070 PF02834 LigT like Phosphoesterase ND441_RS03075 PF08482 ATP-dependent helicase C-terminal ND441_RS03075 PF00270 DEAD/DEAH box helicase ND441_RS03075 PF04408 Helicase associated domain (HA2) ND441_RS03075 PF00271 Helicase conserved C-terminal domain ND441_RS03080 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ND441_RS03080 PF00912 Transglycosylase ND441_RS03080 PF00905 Penicillin binding protein transpeptidase domain ND441_RS03080 PF14814 Bifunctional transglycosylase second domain ND441_RS03085 PF00202 Aminotransferase class-III ND441_RS03090 PF00654 Voltage gated chloride channel ND441_RS03095 PF01521 Iron-sulphur cluster biosynthesis ND441_RS03100 PF03458 UPF0126 domain ND441_RS03105 PF01497 Periplasmic binding protein ND441_RS03110 PF01048 Phosphorylase superfamily ND441_RS03115 PF01966 HD domain ND441_RS03115 PF13286 Phosphohydrolase-associated domain ND441_RS03120 PF00595 PDZ domain ND441_RS03125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND441_RS03125 PF00072 Response regulator receiver domain ND441_RS03125 PF00672 HAMP domain ND441_RS03125 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS03125 PF01627 Hpt domain ND441_RS03130 PF01938 TRAM domain ND441_RS03130 PF05958 tRNA (Uracil-5-)-methyltransferase ND441_RS03135 PF13291 ACT domain ND441_RS03135 PF04607 Region found in RelA / SpoT proteins ND441_RS03135 PF02824 TGS domain ND441_RS03140 PF03819 MazG nucleotide pyrophosphohydrolase domain ND441_RS03145 PF06418 CTP synthase N-terminus ND441_RS03145 PF00117 Glutamine amidotransferase class-I ND441_RS03150 PF00113 Enolase, C-terminal TIM barrel domain ND441_RS03150 PF03952 Enolase, N-terminal domain ND441_RS03155 PF04055 Radical SAM superfamily ND441_RS03160 PF01242 6-pyruvoyl tetrahydropterin synthase ND441_RS03165 PF00667 FAD binding domain ND441_RS03165 PF00258 Flavodoxin ND441_RS03165 PF00175 Oxidoreductase NAD-binding domain ND441_RS03170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND441_RS03170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND441_RS03175 PF01507 Phosphoadenosine phosphosulfate reductase family ND441_RS03190 PF04389 Peptidase family M28 ND441_RS03195 PF14824 Sirohaem biosynthesis protein central ND441_RS03195 PF10414 Sirohaem synthase dimerisation region ND441_RS03195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND441_RS03200 PF01507 Phosphoadenosine phosphosulfate reductase family ND441_RS03205 PF00009 Elongation factor Tu GTP binding domain ND441_RS03215 PF12084 Protein of unknown function (DUF3561) ND441_RS03220 PF04977 Septum formation initiator ND441_RS03225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ND441_RS03230 PF02542 YgbB family ND441_RS03235 PF01142 tRNA pseudouridine synthase D (TruD) ND441_RS03240 PF01975 Survival protein SurE ND441_RS03255 PF01476 LysM domain ND441_RS03255 PF01551 Peptidase family M23 ND441_RS03260 PF04539 Sigma-70 region 3 ND441_RS03260 PF04542 Sigma-70 region 2 ND441_RS03260 PF04545 Sigma-70, region 4 ND441_RS03260 PF00140 Sigma-70 factor, region 1.2 ND441_RS03265 PF01624 MutS domain I ND441_RS03265 PF05188 MutS domain II ND441_RS03265 PF05192 MutS domain III ND441_RS03265 PF05190 MutS family domain IV ND441_RS03265 PF00488 MutS domain V ND441_RS03300 PF00550 Phosphopantetheine attachment site ND441_RS03300 PF00668 Condensation domain ND441_RS03300 PF13193 AMP-binding enzyme C-terminal domain ND441_RS03300 PF00501 AMP-binding enzyme ND441_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS03335 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS03335 PF09308 LuxQ, periplasmic ND441_RS03335 PF00072 Response regulator receiver domain ND441_RS03340 PF00196 Bacterial regulatory proteins, luxR family ND441_RS03340 PF00072 Response regulator receiver domain ND441_RS03355 PF01464 Transglycosylase SLT domain ND441_RS03375 PF01514 Secretory protein of YscJ/FliF family ND441_RS03395 PF12833 Helix-turn-helix domain ND441_RS03400 PF00263 Bacterial type II and III secretion system protein ND441_RS03400 PF03958 Bacterial type II/III secretion system short domain ND441_RS03405 PF07201 HrpJ-like domain ND441_RS03410 PF00771 FHIPEP family ND441_RS03420 PF18269 T3SS EscN ATPase C-terminal domain ND441_RS03420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND441_RS03420 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND441_RS03435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND441_RS03440 PF00813 FliP family ND441_RS03445 PF01313 Bacterial export proteins, family 3 ND441_RS03450 PF01311 Bacterial export proteins, family 1 ND441_RS03455 PF01312 FlhB HrpN YscU SpaS Family ND441_RS03460 PF07720 Tetratricopeptide repeat ND441_RS03485 PF00550 Phosphopantetheine attachment site ND441_RS03505 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND441_RS03505 PF18416 N-acetylglucosamine binding protein domain 2 ND441_RS03510 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND441_RS03515 PF06750 Bacterial Peptidase A24 N-terminal domain ND441_RS03515 PF01478 Type IV leader peptidase family ND441_RS03525 PF12693 GspL periplasmic domain ND441_RS03525 PF05134 Type II secretion system (T2SS), protein L ND441_RS03530 PF03934 Type II secretion system (T2SS), protein K ND441_RS03535 PF07963 Prokaryotic N-terminal methylation motif ND441_RS03535 PF11612 Type II secretion system (T2SS), protein J ND441_RS03540 PF07963 Prokaryotic N-terminal methylation motif ND441_RS03540 PF02501 Type II secretion system (T2SS), protein I ND441_RS03550 PF07963 Prokaryotic N-terminal methylation motif ND441_RS03550 PF08334 Type II secretion system (T2SS), protein G ND441_RS03555 PF00482 Type II secretion system (T2SS), protein F ND441_RS03560 PF00437 Type II/IV secretion system protein ND441_RS03565 PF03958 Bacterial type II/III secretion system short domain ND441_RS03565 PF00263 Bacterial type II and III secretion system protein ND441_RS03570 PF11356 Type II secretion system protein C ND441_RS03595 PF05681 Fumarate hydratase (Fumerase) ND441_RS03595 PF05683 Fumarase C-terminus ND441_RS03600 PF07690 Major Facilitator Superfamily ND441_RS03605 PF02464 Competence-damaged protein ND441_RS03610 PF00154 recA bacterial DNA recombination protein ND441_RS03615 PF02631 RecX family ND441_RS03620 PF02272 DHHA1 domain ND441_RS03620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND441_RS03620 PF01411 tRNA synthetases class II (A) ND441_RS03625 PF02599 Global regulator protein family ND441_RS03650 PF01411 tRNA synthetases class II (A) ND441_RS03650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND441_RS03655 PF13419 Haloacid dehalogenase-like hydrolase ND441_RS03660 PF09335 SNARE associated Golgi protein ND441_RS03665 PF04262 Glutamate-cysteine ligase ND441_RS03670 PF02664 S-Ribosylhomocysteinase (LuxS) ND441_RS03675 PF00571 CBS domain ND441_RS03675 PF01595 Cyclin M transmembrane N-terminal domain ND441_RS03675 PF03471 Transporter associated domain ND441_RS03680 PF01578 Cytochrome C assembly protein ND441_RS03685 PF00448 SRP54-type protein, GTPase domain ND441_RS03685 PF02881 SRP54-type protein, helical bundle domain ND441_RS03685 PF02978 Signal peptide binding domain ND441_RS03690 PF00886 Ribosomal protein S16 ND441_RS03695 PF05239 PRC-barrel domain ND441_RS03695 PF01782 RimM N-terminal domain ND441_RS03700 PF01746 tRNA (Guanine-1)-methyltransferase ND441_RS03705 PF01245 Ribosomal protein L19 ND441_RS03710 PF04338 Protein of unknown function, DUF481 ND441_RS03715 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND441_RS03720 PF04397 LytTr DNA-binding domain ND441_RS03720 PF00072 Response regulator receiver domain ND441_RS03725 PF00793 DAHP synthetase I family ND441_RS03730 PF01817 Chorismate mutase type II ND441_RS03730 PF02153 Prephenate dehydrogenase ND441_RS03735 PF00800 Prephenate dehydratase ND441_RS03735 PF01817 Chorismate mutase type II ND441_RS03745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND441_RS03750 PF13525 Outer membrane lipoprotein ND441_RS03755 PF00849 RNA pseudouridylate synthase ND441_RS03755 PF01479 S4 domain ND441_RS03760 PF02578 Multi-copper polyphenol oxidoreductase laccase ND441_RS03765 PF07724 AAA domain (Cdc48 subfamily) ND441_RS03765 PF00004 ATPase family associated with various cellular activities (AAA) ND441_RS03765 PF17871 AAA lid domain ND441_RS03765 PF02861 Clp amino terminal domain, pathogenicity island component ND441_RS03765 PF10431 C-terminal, D2-small domain, of ClpB protein ND441_RS03800 PF03372 Endonuclease/Exonuclease/phosphatase family ND441_RS03805 PF01476 LysM domain ND441_RS03805 PF01464 Transglycosylase SLT domain ND441_RS03810 PF16123 Hydroxyacylglutathione hydrolase C-terminus ND441_RS03810 PF00753 Metallo-beta-lactamase superfamily ND441_RS03815 PF08241 Methyltransferase domain ND441_RS03820 PF00075 RNase H ND441_RS03825 PF00929 Exonuclease ND441_RS03835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND441_RS03835 PF09317 Domain of unknown function (DUF1974) ND441_RS03835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND441_RS03840 PF13580 SIS domain ND441_RS03845 PF13230 Glutamine amidotransferases class-II ND441_RS03850 PF03734 L,D-transpeptidase catalytic domain ND441_RS03855 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ND441_RS03855 PF11973 NQRA C-terminal domain ND441_RS03860 PF03116 NQR2, RnfD, RnfE family ND441_RS03865 PF04205 FMN-binding domain ND441_RS03870 PF02508 Rnf-Nqr subunit, membrane protein ND441_RS03875 PF02508 Rnf-Nqr subunit, membrane protein ND441_RS03880 PF00970 Oxidoreductase FAD-binding domain ND441_RS03880 PF00111 2Fe-2S iron-sulfur cluster binding domain ND441_RS03880 PF00175 Oxidoreductase NAD-binding domain ND441_RS03885 PF02424 ApbE family ND441_RS03890 PF04400 (Na+)-NQR maturation NqrM ND441_RS03895 PF03009 Glycerophosphoryl diester phosphodiesterase family ND441_RS03900 PF00817 impB/mucB/samB family ND441_RS03900 PF11799 impB/mucB/samB family C-terminal domain ND441_RS03900 PF11798 IMS family HHH motif ND441_RS03905 PF01546 Peptidase family M20/M25/M40 ND441_RS03905 PF07687 Peptidase dimerisation domain ND441_RS03910 PF00156 Phosphoribosyl transferase domain ND441_RS03915 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ND441_RS03920 PF07417 Sigma factor-binding transcriptional regulator Crl ND441_RS03925 PF00696 Amino acid kinase family ND441_RS03925 PF01472 PUA domain ND441_RS03930 PF00171 Aldehyde dehydrogenase family ND441_RS03935 PF07317 Flagellar regulator YcgR ND441_RS03935 PF07238 PilZ domain ND441_RS03960 PF00593 TonB dependent receptor ND441_RS03960 PF07715 TonB-dependent Receptor Plug Domain ND441_RS03965 PF01202 Shikimate kinase ND441_RS03985 PF07302 AroM protein ND441_RS03990 PF06865 Pyrimidine/purine nucleoside phosphorylase ND441_RS03995 PF04381 Putative exonuclease, RdgC ND441_RS04000 PF00480 ROK family ND441_RS04005 PF13476 AAA domain ND441_RS04010 PF12320 Type 5 capsule protein repressor C-terminal domain ND441_RS04010 PF00149 Calcineurin-like phosphoesterase ND441_RS04015 PF00072 Response regulator receiver domain ND441_RS04015 PF00486 Transcriptional regulatory protein, C terminal ND441_RS04020 PF11808 Phosphate regulon sensor protein PhoR ND441_RS04020 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS04020 PF00989 PAS fold ND441_RS04025 PF12849 PBP superfamily domain ND441_RS04030 PF05525 Branched-chain amino acid transport protein ND441_RS04035 PF00324 Amino acid permease ND441_RS04040 PF00128 Alpha amylase, catalytic domain ND441_RS04040 PF02903 Alpha amylase, N-terminal ig-like domain ND441_RS04050 PF10417 C-terminal domain of 1-Cys peroxiredoxin ND441_RS04050 PF00578 AhpC/TSA family ND441_RS04055 PF04336 Acyl carrier protein phosphodiesterase ND441_RS04060 PF02547 Queuosine biosynthesis protein ND441_RS04065 PF01702 Queuine tRNA-ribosyltransferase ND441_RS04070 PF02699 Preprotein translocase subunit ND441_RS04075 PF07549 SecD/SecF GG Motif ND441_RS04075 PF13721 SecD export protein N-terminal TM region ND441_RS04075 PF02355 Protein export membrane protein ND441_RS04080 PF07549 SecD/SecF GG Motif ND441_RS04080 PF02355 Protein export membrane protein ND441_RS04085 PF03477 ATP cone domain ND441_RS04090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND441_RS04090 PF01872 RibD C-terminal domain ND441_RS04095 PF00885 6,7-dimethyl-8-ribityllumazine synthase ND441_RS04100 PF01029 NusB family ND441_RS04105 PF02769 AIR synthase related protein, C-terminal domain ND441_RS04105 PF00586 AIR synthase related protein, N-terminal domain ND441_RS04110 PF04608 Phosphatidylglycerophosphatase A ND441_RS04115 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ND441_RS04115 PF02779 Transketolase, pyrimidine binding domain ND441_RS04115 PF02780 Transketolase, C-terminal domain ND441_RS04120 PF00348 Polyprenyl synthetase ND441_RS04125 PF02609 Exonuclease VII small subunit ND441_RS04130 PF02568 Thiamine biosynthesis protein (ThiI) ND441_RS04130 PF02926 THUMP domain ND441_RS04135 PF14532 Sigma-54 interaction domain ND441_RS04135 PF02954 Bacterial regulatory protein, Fis family ND441_RS04135 PF00072 Response regulator receiver domain ND441_RS04140 PF00672 HAMP domain ND441_RS04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS04140 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS04150 PF07690 Major Facilitator Superfamily ND441_RS04155 PF01965 DJ-1/PfpI family ND441_RS04160 PF02558 Ketopantoate reductase PanE/ApbA ND441_RS04160 PF08546 Ketopantoate reductase PanE/ApbA C terminal ND441_RS04165 PF04461 Protein of unknown function (DUF520) ND441_RS04170 PF07690 Major Facilitator Superfamily ND441_RS04175 PF01040 UbiA prenyltransferase family ND441_RS04180 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ND441_RS04185 PF00510 Cytochrome c oxidase subunit III ND441_RS04190 PF00115 Cytochrome C and Quinol oxidase polypeptide I ND441_RS04195 PF06481 COX Aromatic Rich Motif ND441_RS04195 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ND441_RS04200 PF03502 Nucleoside-specific channel-forming protein, Tsx ND441_RS04205 PF07690 Major Facilitator Superfamily ND441_RS04210 PF03923 Uncharacterized lipoprotein ND441_RS04210 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND441_RS04215 PF01722 BolA-like protein ND441_RS04220 PF05697 Bacterial trigger factor protein (TF) ND441_RS04220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND441_RS04220 PF05698 Bacterial trigger factor protein (TF) C-terminus ND441_RS04225 PF00574 Clp protease ND441_RS04230 PF07724 AAA domain (Cdc48 subfamily) ND441_RS04230 PF10431 C-terminal, D2-small domain, of ClpB protein ND441_RS04230 PF06689 ClpX C4-type zinc finger ND441_RS04235 PF00004 ATPase family associated with various cellular activities (AAA) ND441_RS04235 PF05362 Lon protease (S16) C-terminal proteolytic domain ND441_RS04235 PF02190 ATP-dependent protease La (LON) substrate-binding domain ND441_RS04240 PF00216 Bacterial DNA-binding protein ND441_RS04245 PF13145 PPIC-type PPIASE domain ND441_RS04260 PF06508 Queuosine biosynthesis protein QueC ND441_RS04265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS04265 PF12793 Sugar transport-related sRNA regulator N-term ND441_RS04280 PF01037 Lrp/AsnC ligand binding domain ND441_RS04280 PF13404 AsnC-type helix-turn-helix domain ND441_RS04285 PF00664 ABC transporter transmembrane region ND441_RS04285 PF00005 ABC transporter ND441_RS04290 PF00664 ABC transporter transmembrane region ND441_RS04290 PF00005 ABC transporter ND441_RS04295 PF00543 Nitrogen regulatory protein P-II ND441_RS04300 PF00909 Ammonium Transporter Family ND441_RS04310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND441_RS04320 PF05321 Haemolysin expression modulating protein ND441_RS04325 PF10757 Biofilm formation regulator YbaJ ND441_RS04335 PF00444 Ribosomal protein L36 ND441_RS04340 PF01197 Ribosomal protein L31 ND441_RS04345 PF00873 AcrB/AcrD/AcrF family ND441_RS04350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND441_RS04350 PF00529 HlyD membrane-fusion protein of T1SS ND441_RS04355 PF00440 Bacterial regulatory proteins, tetR family ND441_RS04355 PF08361 MAATS-type transcriptional repressor, C-terminal region ND441_RS04360 PF02635 DsrE/DsrF-like family ND441_RS04365 PF00924 Mechanosensitive ion channel ND441_RS04365 PF12795 Mechanosensitive ion channel porin domain ND441_RS04365 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND441_RS04370 PF10689 Protein of unknown function (DUF2496) ND441_RS04380 PF04304 Protein of unknown function (DUF454) ND441_RS04385 PF00156 Phosphoribosyl transferase domain ND441_RS04390 PF01970 Tripartite tricarboxylate transporter TctA family ND441_RS04405 PF00072 Response regulator receiver domain ND441_RS04405 PF00486 Transcriptional regulatory protein, C terminal ND441_RS04410 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS04415 PF12169 DNA polymerase III subunits gamma and tau domain III ND441_RS04415 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ND441_RS04415 PF12170 DNA polymerase III tau subunit V interacting with alpha ND441_RS04420 PF02575 YbaB/EbfC DNA-binding family ND441_RS04425 PF02132 RecR protein ND441_RS04425 PF13662 Toprim domain ND441_RS04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS04430 PF00183 Hsp90 protein ND441_RS04435 PF05191 Adenylate kinase, active site lid ND441_RS04440 PF00762 Ferrochelatase ND441_RS04445 PF02706 Chain length determinant protein ND441_RS04450 PF00294 pfkB family carbohydrate kinase ND441_RS04455 PF02254 TrkA-N domain ND441_RS04455 PF00999 Sodium/hydrogen exchanger family ND441_RS04460 PF02872 5'-nucleotidase, C-terminal domain ND441_RS04460 PF00149 Calcineurin-like phosphoesterase ND441_RS04465 PF04073 Aminoacyl-tRNA editing domain ND441_RS04470 PF01963 TraB family ND441_RS04475 PF00403 Heavy-metal-associated domain ND441_RS04480 PF13411 MerR HTH family regulatory protein ND441_RS04485 PF01957 NfeD-like C-terminal, partner-binding ND441_RS04490 PF01145 SPFH domain / Band 7 family ND441_RS04490 PF16200 C-terminal region of band_7 ND441_RS04495 PF00085 Thioredoxin ND441_RS04500 PF00106 short chain dehydrogenase ND441_RS04505 PF13472 GDSL-like Lipase/Acylhydrolase family ND441_RS04510 PF00005 ABC transporter ND441_RS04520 PF02222 ATP-grasp domain ND441_RS04520 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ND441_RS04525 PF00731 AIR carboxylase ND441_RS04530 PF00149 Calcineurin-like phosphoesterase ND441_RS04535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND441_RS04540 PF09190 DALR domain ND441_RS04540 PF01406 tRNA synthetases class I (C) catalytic domain ND441_RS04555 PF00419 Fimbrial protein ND441_RS04560 PF00577 Outer membrane usher protein ND441_RS04560 PF13953 PapC C-terminal domain ND441_RS04560 PF13954 PapC N-terminal domain ND441_RS04565 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS04565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS04600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ND441_RS04600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ND441_RS04610 PF01022 Bacterial regulatory protein, arsR family ND441_RS04615 PF02040 Arsenical pump membrane protein ND441_RS04620 PF03960 ArsC family ND441_RS04630 PF00501 AMP-binding enzyme ND441_RS04655 PF01292 Prokaryotic cytochrome b561 ND441_RS04665 PF00343 Carbohydrate phosphorylase ND441_RS04675 PF00072 Response regulator receiver domain ND441_RS04675 PF00486 Transcriptional regulatory protein, C terminal ND441_RS04685 PF00483 Nucleotidyl transferase ND441_RS04695 PF03552 Cellulose synthase ND441_RS04695 PF00535 Glycosyl transferase family 2 ND441_RS04695 PF07238 PilZ domain ND441_RS04715 PF16355 Domain of unknown function (DUF4982) ND441_RS04715 PF00703 Glycosyl hydrolases family 2 ND441_RS04715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND441_RS04715 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND441_RS04720 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS04720 PF01627 Hpt domain ND441_RS04720 PF00072 Response regulator receiver domain ND441_RS04720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND441_RS04720 PF00672 HAMP domain ND441_RS04725 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS04725 PF00072 Response regulator receiver domain ND441_RS04730 PF00440 Bacterial regulatory proteins, tetR family ND441_RS04760 PF00196 Bacterial regulatory proteins, luxR family ND441_RS04765 PF00313 'Cold-shock' DNA-binding domain ND441_RS04770 PF00313 'Cold-shock' DNA-binding domain ND441_RS04775 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ND441_RS04785 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS04785 PF05230 MASE2 domain ND441_RS04790 PF02416 mttA/Hcf106 family ND441_RS04795 PF04055 Radical SAM superfamily ND441_RS04795 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ND441_RS04800 PF03099 Biotin/lipoate A/B protein ligase family ND441_RS04805 PF04359 Protein of unknown function (DUF493) ND441_RS04810 PF07943 Penicillin-binding protein 5, C-terminal domain ND441_RS04810 PF00768 D-alanyl-D-alanine carboxypeptidase ND441_RS04815 PF03330 Lytic transglycolase ND441_RS04815 PF05036 Sporulation related domain ND441_RS04820 PF01098 Cell cycle protein ND441_RS04825 PF00905 Penicillin binding protein transpeptidase domain ND441_RS04825 PF03717 Penicillin-binding Protein dimerisation domain ND441_RS04830 PF02590 Predicted SPOUT methyltransferase ND441_RS04840 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ND441_RS04840 PF00589 Phage integrase family ND441_RS04900 PF00929 Exonuclease ND441_RS04965 PF00772 DnaB-like helicase N terminal domain ND441_RS04965 PF03796 DnaB-like helicase C terminal domain ND441_RS04990 PF00149 Calcineurin-like phosphoesterase ND441_RS05025 PF03245 Bacteriophage Rz lysis protein ND441_RS05065 PF01343 Peptidase family S49 ND441_RS05105 PF04984 Phage tail sheath protein subtilisin-like domain ND441_RS05105 PF17482 Phage tail sheath C-terminal domain ND441_RS05145 PF04865 Baseplate J-like protein ND441_RS05160 PF03335 Phage tail fibre repeat ND441_RS05160 PF07484 Phage Tail Collar Domain ND441_RS05160 PF08400 Prophage tail fibre N-terminal ND441_RS05165 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND441_RS05170 PF01467 Cytidylyltransferase-like ND441_RS05175 PF06144 DNA polymerase III, delta subunit ND441_RS05175 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ND441_RS05180 PF04390 Lipopolysaccharide-assembly ND441_RS05185 PF13603 Leucyl-tRNA synthetase, Domain 2 ND441_RS05185 PF08264 Anticodon-binding domain of tRNA ND441_RS05185 PF00133 tRNA synthetases class I (I, L, M and V) ND441_RS05190 PF07295 Zinc-ribbon containing domain ND441_RS05195 PF00005 ABC transporter ND441_RS05200 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05205 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05210 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS05215 PF00795 Carbon-nitrogen hydrolase ND441_RS05220 PF00571 CBS domain ND441_RS05220 PF03471 Transporter associated domain ND441_RS05225 PF02130 Uncharacterized protein family UPF0054 ND441_RS05230 PF02562 PhoH-like protein ND441_RS05235 PF04055 Radical SAM superfamily ND441_RS05235 PF01938 TRAM domain ND441_RS05235 PF00919 Uncharacterized protein family UPF0004 ND441_RS05240 PF01494 FAD binding domain ND441_RS05275 PF00733 Asparagine synthase ND441_RS05275 PF13537 Glutamine amidotransferase domain ND441_RS05280 PF13344 Haloacid dehalogenase-like hydrolase ND441_RS05285 PF00480 ROK family ND441_RS05285 PF01047 MarR family ND441_RS05290 PF01979 Amidohydrolase family ND441_RS05295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND441_RS05300 PF00367 phosphotransferase system, EIIB ND441_RS05300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND441_RS05300 PF02378 Phosphotransferase system, EIIC ND441_RS05305 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND441_RS05305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ND441_RS05310 PF03573 outer membrane porin, OprD family ND441_RS05315 PF13982 YbfN-like lipoprotein ND441_RS05320 PF02838 Glycosyl hydrolase family 20, domain 2 ND441_RS05320 PF00728 Glycosyl hydrolase family 20, catalytic domain ND441_RS05320 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ND441_RS05320 PF03173 Putative carbohydrate binding domain ND441_RS05325 PF01475 Ferric uptake regulator family ND441_RS05330 PF00258 Flavodoxin ND441_RS05335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS05335 PF02203 Tar ligand binding domain homologue ND441_RS05335 PF00672 HAMP domain ND441_RS05340 PF01402 Ribbon-helix-helix protein, copG family ND441_RS05345 PF12697 Alpha/beta hydrolase family ND441_RS05350 PF17206 SeqA protein N-terminal domain ND441_RS05350 PF03925 SeqA protein C-terminal domain ND441_RS05355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND441_RS05355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND441_RS05355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND441_RS05355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND441_RS05365 PF00072 Response regulator receiver domain ND441_RS05365 PF00486 Transcriptional regulatory protein, C terminal ND441_RS05370 PF13493 Domain of unknown function (DUF4118) ND441_RS05370 PF13492 GAF domain ND441_RS05370 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS05370 PF02702 Osmosensitive K+ channel His kinase sensor domain ND441_RS05375 PF02669 K+-transporting ATPase, c chain ND441_RS05385 PF03814 Potassium-transporting ATPase A subunit ND441_RS05390 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ND441_RS05395 PF10725 Protein of unknown function (DUF2517) ND441_RS05400 PF08349 Protein of unknown function (DUF1722) ND441_RS05405 PF00875 DNA photolyase ND441_RS05405 PF03441 FAD binding domain of DNA photolyase ND441_RS05410 PF02112 cAMP phosphodiesterases class-II ND441_RS05415 PF01784 NIF3 (NGG1p interacting factor 3) ND441_RS05420 PF02682 Carboxyltransferase domain, subdomain C and D ND441_RS05425 PF02626 Carboxyltransferase domain, subdomain A and B ND441_RS05430 PF03746 LamB/YcsF family ND441_RS05445 PF01470 Pyroglutamyl peptidase ND441_RS05455 PF00285 Citrate synthase, C-terminal domain ND441_RS05460 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND441_RS05465 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND441_RS05470 PF00890 FAD binding domain ND441_RS05470 PF02910 Fumarate reductase flavoprotein C-term ND441_RS05475 PF13085 2Fe-2S iron-sulfur cluster binding domain ND441_RS05480 PF16078 2-oxoglutarate dehydrogenase N-terminus ND441_RS05480 PF00676 Dehydrogenase E1 component ND441_RS05480 PF16870 2-oxoglutarate dehydrogenase C-terminal ND441_RS05480 PF02779 Transketolase, pyrimidine binding domain ND441_RS05485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND441_RS05485 PF00364 Biotin-requiring enzyme ND441_RS05485 PF02817 e3 binding domain ND441_RS05490 PF08442 ATP-grasp domain ND441_RS05490 PF00549 CoA-ligase ND441_RS05495 PF02629 CoA binding domain ND441_RS05495 PF00549 CoA-ligase ND441_RS05500 PF00149 Calcineurin-like phosphoesterase ND441_RS05500 PF02872 5'-nucleotidase, C-terminal domain ND441_RS05505 PF01654 Cytochrome bd terminal oxidase subunit I ND441_RS05510 PF02322 Cytochrome bd terminal oxidase subunit II ND441_RS05515 PF08173 Membrane bound YbgT-like protein ND441_RS05520 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ND441_RS05525 PF03061 Thioesterase superfamily ND441_RS05530 PF01618 MotA/TolQ/ExbB proton channel family ND441_RS05535 PF02472 Biopolymer transport protein ExbD/TolR ND441_RS05540 PF06519 TolA C-terminal ND441_RS05540 PF06519 TolA C-terminal ND441_RS05545 PF07676 WD40-like Beta Propeller Repeat ND441_RS05545 PF04052 TolB amino-terminal domain ND441_RS05550 PF00691 OmpA family ND441_RS05555 PF16331 TolA binding protein trimerisation ND441_RS05555 PF13174 Tetratricopeptide repeat ND441_RS05595 PF02445 Quinolinate synthetase A protein ND441_RS05600 PF04973 Nicotinamide mononucleotide transporter ND441_RS05605 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS05605 PF01627 Hpt domain ND441_RS05605 PF00989 PAS fold ND441_RS05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS05605 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS05605 PF00072 Response regulator receiver domain ND441_RS05610 PF00072 Response regulator receiver domain ND441_RS05610 PF00196 Bacterial regulatory proteins, luxR family ND441_RS05615 PF00793 DAHP synthetase I family ND441_RS05620 PF00300 Histidine phosphatase superfamily (branch 1) ND441_RS05630 PF01263 Aldose 1-epimerase ND441_RS05635 PF10509 Galactokinase galactose-binding signature ND441_RS05635 PF08544 GHMP kinases C terminal ND441_RS05635 PF00288 GHMP kinases N terminal domain ND441_RS05640 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ND441_RS05640 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ND441_RS05645 PF16363 GDP-mannose 4,6 dehydratase ND441_RS05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS05660 PF03459 TOBE domain ND441_RS05665 PF10766 Multidrug efflux pump-associated protein AcrZ ND441_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05680 PF03459 TOBE domain ND441_RS05680 PF00005 ABC transporter ND441_RS05690 PF10282 Lactonase, 7-bladed beta-propeller ND441_RS05695 PF00202 Aminotransferase class-III ND441_RS05700 PF06968 Biotin and Thiamin Synthesis associated domain ND441_RS05700 PF04055 Radical SAM superfamily ND441_RS05705 PF00155 Aminotransferase class I and II ND441_RS05710 PF08241 Methyltransferase domain ND441_RS05720 PF00005 ABC transporter ND441_RS05725 PF17757 UvrB interaction domain ND441_RS05725 PF00271 Helicase conserved C-terminal domain ND441_RS05725 PF02151 UvrB/uvrC motif ND441_RS05725 PF04851 Type III restriction enzyme, res subunit ND441_RS05725 PF12344 Ultra-violet resistance protein B ND441_RS05730 PF09905 DNA-binding protein VF530 ND441_RS05745 PF01032 FecCD transport family ND441_RS05750 PF00005 ABC transporter ND441_RS05755 PF01933 Uncharacterised protein family UPF0052 ND441_RS05760 PF04055 Radical SAM superfamily ND441_RS05760 PF06463 Molybdenum Cofactor Synthesis C ND441_RS05765 PF01967 MoaC family ND441_RS05770 PF02597 ThiS family ND441_RS05775 PF02391 MoaE protein ND441_RS05780 PF01027 Inhibitor of apoptosis-promoting Bax1 ND441_RS05795 PF00005 ABC transporter ND441_RS05800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND441_RS05805 PF09209 Tetracyclin repressor-like, C-terminal domain ND441_RS05805 PF00440 Bacterial regulatory proteins, tetR family ND441_RS05810 PF00271 Helicase conserved C-terminal domain ND441_RS05810 PF00270 DEAD/DEAH box helicase ND441_RS05815 PF01207 Dihydrouridine synthase (Dus) ND441_RS05825 PF00768 D-alanyl-D-alanine carboxypeptidase ND441_RS05830 PF09330 D-lactate dehydrogenase, membrane binding ND441_RS05830 PF01565 FAD binding domain ND441_RS05835 PF01928 CYTH domain ND441_RS05840 PF01844 HNH endonuclease ND441_RS05850 PF04226 Transglycosylase associated protein ND441_RS05855 PF00005 ABC transporter ND441_RS05865 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05870 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05875 PF07308 Protein of unknown function (DUF1456) ND441_RS05880 PF00581 Rhodanese-like domain ND441_RS05885 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND441_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05895 PF00005 ABC transporter ND441_RS05900 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05905 PF13520 Amino acid permease ND441_RS05910 PF01276 Orn/Lys/Arg decarboxylase, major domain ND441_RS05910 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND441_RS05910 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND441_RS05920 PF00892 EamA-like transporter family ND441_RS05925 PF00267 Gram-negative porin ND441_RS05930 PF13307 Helicase C-terminal domain ND441_RS05930 PF06733 DEAD_2 ND441_RS05935 PF02885 Glycosyl transferase family, helical bundle domain ND441_RS05940 PF05971 RNA methyltransferase ND441_RS05945 PF00005 ABC transporter ND441_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS05955 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS05960 PF00210 Ferritin-like domain ND441_RS05965 PF13649 Methyltransferase domain ND441_RS05970 PF00892 EamA-like transporter family ND441_RS05975 PF13505 Outer membrane protein beta-barrel domain ND441_RS05980 PF03448 MgtE intracellular N domain ND441_RS05980 PF00571 CBS domain ND441_RS05980 PF01769 Divalent cation transporter ND441_RS05985 PF16916 Dimerisation domain of Zinc Transporter ND441_RS05985 PF01545 Cation efflux family ND441_RS05990 PF12848 ABC transporter ND441_RS05990 PF00005 ABC transporter ND441_RS05995 PF00899 ThiF family ND441_RS06000 PF00994 Probable molybdopterin binding domain ND441_RS06000 PF03453 MoeA N-terminal region (domain I and II) ND441_RS06000 PF03454 MoeA C-terminal region (domain IV) ND441_RS06010 PF00756 Putative esterase ND441_RS06015 PF08240 Alcohol dehydrogenase GroES-like domain ND441_RS06015 PF00107 Zinc-binding dehydrogenase ND441_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS06020 PF03466 LysR substrate binding domain ND441_RS06025 PF06779 Uncharacterised MFS-type transporter YbfB ND441_RS06030 PF01227 GTP cyclohydrolase I ND441_RS06035 PF04235 Protein of unknown function (DUF418) ND441_RS06040 PF00356 Bacterial regulatory proteins, lacI family ND441_RS06045 PF13407 Periplasmic binding protein domain ND441_RS06050 PF00005 ABC transporter ND441_RS06055 PF02653 Branched-chain amino acid transport system / permease component ND441_RS06060 PF02698 DUF218 domain ND441_RS06065 PF03949 Malic enzyme, NAD binding domain ND441_RS06065 PF00390 Malic enzyme, N-terminal domain ND441_RS06075 PF03466 LysR substrate binding domain ND441_RS06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS06080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND441_RS06080 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ND441_RS06085 PF04172 LrgB-like family ND441_RS06090 PF03788 LrgA family ND441_RS06100 PF09334 tRNA synthetases class I (M) ND441_RS06100 PF01588 Putative tRNA binding domain ND441_RS06105 PF10609 NUBPL iron-transfer P-loop NTPase ND441_RS06110 PF00485 Phosphoribulokinase / Uridine kinase family ND441_RS06115 PF00692 dUTPase ND441_RS06120 PF05170 AsmA family ND441_RS06125 PF03606 C4-dicarboxylate anaerobic carrier ND441_RS06130 PF03471 Transporter associated domain ND441_RS06130 PF03741 Integral membrane protein TerC family ND441_RS06130 PF00571 CBS domain ND441_RS06135 PF00483 Nucleotidyl transferase ND441_RS06140 PF00483 Nucleotidyl transferase ND441_RS06145 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ND441_RS06145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND441_RS06155 PF01502 Phosphoribosyl-AMP cyclohydrolase ND441_RS06155 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ND441_RS06160 PF00977 Histidine biosynthesis protein ND441_RS06165 PF00977 Histidine biosynthesis protein ND441_RS06170 PF00117 Glutamine amidotransferase class-I ND441_RS06175 PF00475 Imidazoleglycerol-phosphate dehydratase ND441_RS06180 PF00155 Aminotransferase class I and II ND441_RS06185 PF00815 Histidinol dehydrogenase ND441_RS06190 PF01634 ATP phosphoribosyltransferase ND441_RS06190 PF08029 HisG, C-terminal domain ND441_RS06200 PF01370 NAD dependent epimerase/dehydratase family ND441_RS06205 PF00043 Glutathione S-transferase, C-terminal domain ND441_RS06205 PF13417 Glutathione S-transferase, N-terminal domain ND441_RS06220 PF01053 Cys/Met metabolism PLP-dependent enzyme ND441_RS06225 PF00571 CBS domain ND441_RS06225 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS06230 PF07943 Penicillin-binding protein 5, C-terminal domain ND441_RS06230 PF00768 D-alanyl-D-alanine carboxypeptidase ND441_RS06235 PF03315 Serine dehydratase beta chain ND441_RS06235 PF03313 Serine dehydratase alpha chain ND441_RS06245 PF00455 DeoR C terminal sensor domain ND441_RS06245 PF08220 DeoR-like helix-turn-helix domain ND441_RS06250 PF01791 DeoC/LacD family aldolase ND441_RS06255 PF01569 PAP2 superfamily ND441_RS06265 PF06826 Predicted Permease Membrane Region ND441_RS06265 PF02080 TrkA-C domain ND441_RS06270 PF00462 Glutaredoxin ND441_RS06275 PF07214 Protein of unknown function (DUF1418) ND441_RS06280 PF10722 Putative bacterial sensory transduction regulator ND441_RS06285 PF13416 Bacterial extracellular solute-binding protein ND441_RS06290 PF00005 ABC transporter ND441_RS06290 PF08402 TOBE domain ND441_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS06300 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS06305 PF10767 Protein of unknown function (DUF2593) ND441_RS06310 PF05958 tRNA (Uracil-5-)-methyltransferase ND441_RS06315 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS06325 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS06330 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS06335 PF00005 ABC transporter ND441_RS06340 PF12883 Protein of unknown function (DUF3828) ND441_RS06345 PF01906 Putative heavy-metal-binding ND441_RS06350 PF01370 NAD dependent epimerase/dehydratase family ND441_RS06355 PF13460 NAD(P)H-binding ND441_RS06355 PF11066 Protein of unknown function (DUF2867) ND441_RS06360 PF01212 Beta-eliminating lyase ND441_RS06365 PF00111 2Fe-2S iron-sulfur cluster binding domain ND441_RS06365 PF00175 Oxidoreductase NAD-binding domain ND441_RS06365 PF00970 Oxidoreductase FAD-binding domain ND441_RS06370 PF03063 Prismane/CO dehydrogenase family ND441_RS06375 PF03956 Lysine exporter LysO ND441_RS06380 PF11398 Protein of unknown function (DUF2813) ND441_RS06385 PF04393 Protein of unknown function (DUF535) ND441_RS06390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND441_RS06395 PF00005 ABC transporter ND441_RS06395 PF02687 FtsX-like permease family ND441_RS06395 PF12704 MacB-like periplasmic core domain ND441_RS06400 PF00313 'Cold-shock' DNA-binding domain ND441_RS06405 PF02617 ATP-dependent Clp protease adaptor protein ClpS ND441_RS06410 PF17871 AAA lid domain ND441_RS06410 PF10431 C-terminal, D2-small domain, of ClpB protein ND441_RS06410 PF00004 ATPase family associated with various cellular activities (AAA) ND441_RS06410 PF07724 AAA domain (Cdc48 subfamily) ND441_RS06410 PF02861 Clp amino terminal domain, pathogenicity island component ND441_RS06415 PF01176 Translation initiation factor 1A / IF-1 ND441_RS06420 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ND441_RS06425 PF00664 ABC transporter transmembrane region ND441_RS06425 PF00005 ABC transporter ND441_RS06430 PF00664 ABC transporter transmembrane region ND441_RS06430 PF00005 ABC transporter ND441_RS06435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS06440 PF01037 Lrp/AsnC ligand binding domain ND441_RS06445 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND441_RS06445 PF17854 FtsK alpha domain ND441_RS06445 PF09397 Ftsk gamma domain ND441_RS06445 PF01580 FtsK/SpoIIIE family ND441_RS06450 PF03548 Outer membrane lipoprotein carrier protein LolA ND441_RS06455 PF12002 MgsA AAA+ ATPase C terminal ND441_RS06455 PF00004 ATPase family associated with various cellular activities (AAA) ND441_RS06455 PF16193 AAA C-terminal domain ND441_RS06460 PF02403 Seryl-tRNA synthetase N-terminal domain ND441_RS06460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND441_RS06465 PF07690 Major Facilitator Superfamily ND441_RS06470 PF04055 Radical SAM superfamily ND441_RS06475 PF02901 Pyruvate formate lyase-like ND441_RS06475 PF01228 Glycine radical ND441_RS06480 PF01226 Formate/nitrite transporter ND441_RS06485 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ND441_RS06485 PF18381 YcaO cyclodehydratase C-terminal domain ND441_RS06490 PF00710 Asparaginase, N-terminal ND441_RS06490 PF17763 Glutaminase/Asparaginase C-terminal domain ND441_RS06495 PF00266 Aminotransferase class-V ND441_RS06500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND441_RS06505 PF02224 Cytidylate kinase ND441_RS06510 PF00575 S1 RNA binding domain ND441_RS06515 PF00216 Bacterial DNA-binding protein ND441_RS06520 PF00753 Metallo-beta-lactamase superfamily ND441_RS06520 PF03772 Competence protein ND441_RS06525 PF00005 ABC transporter ND441_RS06525 PF00664 ABC transporter transmembrane region ND441_RS06530 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ND441_RS06535 PF07063 Domain of unknown function (DUF1338) ND441_RS06540 PF00313 'Cold-shock' DNA-binding domain ND441_RS06545 PF00313 'Cold-shock' DNA-binding domain ND441_RS06550 PF03966 Trm112p-like protein ND441_RS06555 PF02348 Cytidylyltransferase ND441_RS06560 PF01636 Phosphotransferase enzyme family ND441_RS06565 PF02698 DUF218 domain ND441_RS06570 PF13847 Methyltransferase domain ND441_RS06575 PF03882 MukF winged-helix domain ND441_RS06575 PF17193 MukF C-terminal domain ND441_RS06575 PF17192 MukF middle domain ND441_RS06580 PF04288 MukE-like family ND441_RS06585 PF16330 MukB hinge domain ND441_RS06585 PF04310 MukB N-terminal ND441_RS06590 PF01471 Putative peptidoglycan binding domain ND441_RS06590 PF03734 L,D-transpeptidase catalytic domain ND441_RS06595 PF05951 Bacterial protein of unknown function (DUF882) ND441_RS06600 PF00753 Metallo-beta-lactamase superfamily ND441_RS06605 PF00155 Aminotransferase class I and II ND441_RS06610 PF00267 Gram-negative porin ND441_RS06615 PF00152 tRNA synthetases class II (D, K and N) ND441_RS06615 PF01336 OB-fold nucleic acid binding domain ND441_RS06620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ND441_RS06620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ND441_RS06625 PF01433 Peptidase family M1 domain ND441_RS06625 PF11940 Domain of unknown function (DUF3458) Ig-like fold ND441_RS06625 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ND441_RS06630 PF01180 Dihydroorotate dehydrogenase ND441_RS06635 PF07126 Cell-division protein ZapC ND441_RS06640 PF00111 2Fe-2S iron-sulfur cluster binding domain ND441_RS06640 PF03473 MOSC domain ND441_RS06640 PF03476 MOSC N-terminal beta barrel domain ND441_RS06645 PF10672 S-adenosylmethionine-dependent methyltransferase ND441_RS06645 PF02926 THUMP domain ND441_RS06645 PF01170 Putative RNA methylase family UPF0020 ND441_RS06650 PF12848 ABC transporter ND441_RS06650 PF00005 ABC transporter ND441_RS06650 PF16326 ABC transporter C-terminal domain ND441_RS06655 PF04403 Paraquat-inducible protein A ND441_RS06660 PF02470 MlaD protein ND441_RS06665 PF03886 ABC-type transport auxiliary lipoprotein component ND441_RS06670 PF04957 Ribosome modulation factor ND441_RS06675 PF07977 FabA-like domain ND441_RS06680 PF13654 AAA domain ND441_RS06680 PF05362 Lon protease (S16) C-terminal proteolytic domain ND441_RS06685 PF17414 MatP C-terminal ribbon-helix-helix domain ND441_RS06685 PF06303 MatP N-terminal domain ND441_RS06690 PF01389 OmpA-like transmembrane domain ND441_RS06690 PF00691 OmpA family ND441_RS06695 PF03846 Cell division inhibitor SulA ND441_RS06700 PF04994 TfoX C-terminal domain ND441_RS06700 PF04993 TfoX N-terminal domain ND441_RS06705 PF12805 FUSC-like inner membrane protein yccS ND441_RS06710 PF03733 Inner membrane component domain ND441_RS06715 PF00580 UvrD/REP helicase N-terminal domain ND441_RS06715 PF12462 DNA helicase IV / RNA helicase N terminal ND441_RS06715 PF13361 UvrD-like helicase C-terminal domain ND441_RS06720 PF02142 MGS-like domain ND441_RS06725 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ND441_RS06730 PF13380 CoA binding domain ND441_RS06735 PF08755 Hemimethylated DNA-binding protein YccV like ND441_RS06740 PF10672 S-adenosylmethionine-dependent methyltransferase ND441_RS06740 PF17785 PUA-like domain ND441_RS06745 PF00708 Acylphosphatase ND441_RS06750 PF04358 DsrC like protein ND441_RS06760 PF00484 Carbonic anhydrase ND441_RS06765 PF03471 Transporter associated domain ND441_RS06765 PF00999 Sodium/hydrogen exchanger family ND441_RS06765 PF02080 TrkA-C domain ND441_RS06775 PF01757 Acyltransferase family ND441_RS06780 PF04349 Periplasmic glucan biosynthesis protein, MdoG ND441_RS06785 PF00535 Glycosyl transferase family 2 ND441_RS06795 PF01797 Transposase IS200 like ND441_RS06800 PF12323 Helix-turn-helix domain ND441_RS06800 PF01385 Probable transposase ND441_RS06800 PF07282 Putative transposase DNA-binding domain ND441_RS06805 PF00854 POT family ND441_RS06815 PF03279 Bacterial lipid A biosynthesis acyltransferase ND441_RS06820 PF00581 Rhodanese-like domain ND441_RS06820 PF12368 Rhodanase C-terminal ND441_RS06820 PF17773 UPF0176 acylphosphatase like domain ND441_RS06825 PF01594 AI-2E family transporter ND441_RS06830 PF00196 Bacterial regulatory proteins, luxR family ND441_RS06835 PF01266 FAD dependent oxidoreductase ND441_RS06840 PF13991 BssS protein family ND441_RS06845 PF06183 DinI-like family ND441_RS06850 PF01979 Amidohydrolase family ND441_RS06855 PF03992 Antibiotic biosynthesis monooxygenase ND441_RS06865 PF12111 Polyribonucleotide phosphorylase C terminal ND441_RS06865 PF10150 Ribonuclease E/G family ND441_RS06865 PF00575 S1 RNA binding domain ND441_RS06870 PF00849 RNA pseudouridylate synthase ND441_RS06870 PF01479 S4 domain ND441_RS06875 PF02545 Maf-like protein ND441_RS06880 PF02620 Large ribosomal RNA subunit accumulation protein YceD ND441_RS06885 PF01783 Ribosomal L32p protein family ND441_RS06890 PF02504 Fatty acid synthesis protein ND441_RS06895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ND441_RS06895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ND441_RS06900 PF00698 Acyl transferase domain ND441_RS06910 PF00550 Phosphopantetheine attachment site ND441_RS06915 PF00109 Beta-ketoacyl synthase, N-terminal domain ND441_RS06915 PF02801 Beta-ketoacyl synthase, C-terminal domain ND441_RS06920 PF01063 Amino-transferase class IV ND441_RS06925 PF02618 YceG-like family ND441_RS06930 PF02223 Thymidylate kinase ND441_RS06935 PF09115 DNA polymerase III, delta subunit, C terminal ND441_RS06940 PF01026 TatD related DNase ND441_RS06945 PF02378 Phosphotransferase system, EIIC ND441_RS06945 PF00367 phosphotransferase system, EIIB ND441_RS06950 PF01230 HIT domain ND441_RS06955 PF07233 Protein of unknown function (DUF1425) ND441_RS06960 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND441_RS06960 PF13036 Peptidoglycan-synthase activator LpoB ND441_RS06965 PF01636 Phosphotransferase enzyme family ND441_RS06970 PF00933 Glycosyl hydrolase family 3 N terminal domain ND441_RS06975 PF05728 Uncharacterised protein family (UPF0227) ND441_RS06980 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS06985 PF05433 Glycine zipper 2TM domain ND441_RS06990 PF17757 UvrB interaction domain ND441_RS06990 PF02559 CarD-like/TRCF domain ND441_RS06990 PF00270 DEAD/DEAH box helicase ND441_RS06990 PF00271 Helicase conserved C-terminal domain ND441_RS06990 PF03461 TRCF domain ND441_RS06995 PF02687 FtsX-like permease family ND441_RS06995 PF12704 MacB-like periplasmic core domain ND441_RS07000 PF00005 ABC transporter ND441_RS07005 PF02687 FtsX-like permease family ND441_RS07005 PF12704 MacB-like periplasmic core domain ND441_RS07010 PF00480 ROK family ND441_RS07015 PF02146 Sir2 family ND441_RS07020 PF07687 Peptidase dimerisation domain ND441_RS07020 PF01546 Peptidase family M20/M25/M40 ND441_RS07025 PF08007 Cupin superfamily protein ND441_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS07030 PF08918 PhoQ Sensor ND441_RS07035 PF00072 Response regulator receiver domain ND441_RS07035 PF00486 Transcriptional regulatory protein, C terminal ND441_RS07045 PF08328 Adenylosuccinate lyase C-terminal ND441_RS07045 PF00206 Lyase ND441_RS07050 PF04356 Protein of unknown function (DUF489) ND441_RS07060 PF00293 NUDIX domain ND441_RS07065 PF00849 RNA pseudouridylate synthase ND441_RS07070 PF00180 Isocitrate/isopropylmalate dehydrogenase ND441_RS07075 PF00196 Bacterial regulatory proteins, luxR family ND441_RS07075 PF03472 Autoinducer binding domain ND441_RS07080 PF00765 Autoinducer synthase ND441_RS07085 PF00232 Glycosyl hydrolase family 1 ND441_RS07095 PF01432 Peptidase family M3 ND441_RS07100 PF00672 HAMP domain ND441_RS07100 PF02203 Tar ligand binding domain homologue ND441_RS07100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS07120 PF01797 Transposase IS200 like ND441_RS07125 PF01385 Probable transposase ND441_RS07125 PF12323 Helix-turn-helix domain ND441_RS07125 PF07282 Putative transposase DNA-binding domain ND441_RS07135 PF00072 Response regulator receiver domain ND441_RS07140 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND441_RS07140 PF00989 PAS fold ND441_RS07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS07140 PF17203 Single cache domain 3 ND441_RS07145 PF00939 Sodium:sulfate symporter transmembrane region ND441_RS07150 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ND441_RS07150 PF00413 Matrixin ND441_RS07150 PF08548 Peptidase M10 serralysin C terminal ND441_RS07155 PF02974 Protease inhibitor Inh ND441_RS07160 PF00664 ABC transporter transmembrane region ND441_RS07160 PF00005 ABC transporter ND441_RS07165 PF00529 HlyD membrane-fusion protein of T1SS ND441_RS07170 PF02321 Outer membrane efflux protein ND441_RS07185 PF12833 Helix-turn-helix domain ND441_RS07185 PF02311 AraC-like ligand binding domain ND441_RS07190 PF02562 PhoH-like protein ND441_RS07195 PF01699 Sodium/calcium exchanger protein ND441_RS07200 PF04954 Siderophore-interacting protein ND441_RS07200 PF08021 Siderophore-interacting FAD-binding domain ND441_RS07205 PF00672 HAMP domain ND441_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS07205 PF07730 Histidine kinase ND441_RS07205 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ND441_RS07215 PF02322 Cytochrome bd terminal oxidase subunit II ND441_RS07220 PF01654 Cytochrome bd terminal oxidase subunit I ND441_RS07225 PF00155 Aminotransferase class I and II ND441_RS07225 PF00392 Bacterial regulatory proteins, gntR family ND441_RS07230 PF00202 Aminotransferase class-III ND441_RS07235 PF04958 Arginine N-succinyltransferase beta subunit ND441_RS07240 PF00171 Aldehyde dehydrogenase family ND441_RS07245 PF04996 Succinylarginine dihydrolase ND441_RS07255 PF00267 Gram-negative porin ND441_RS07265 PF01979 Amidohydrolase family ND441_RS07270 PF00392 Bacterial regulatory proteins, gntR family ND441_RS07270 PF07702 UTRA domain ND441_RS07275 PF01979 Amidohydrolase family ND441_RS07280 PF05962 HutD ND441_RS07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS07285 PF03466 LysR substrate binding domain ND441_RS07295 PF03824 High-affinity nickel-transport protein ND441_RS07300 PF07503 HypF finger ND441_RS07300 PF01300 Telomere recombination ND441_RS07300 PF17788 HypF Kae1-like domain ND441_RS07300 PF00708 Acylphosphatase ND441_RS07305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND441_RS07305 PF00384 Molybdopterin oxidoreductase ND441_RS07305 PF01568 Molydopterin dinucleotide binding domain ND441_RS07310 PF12800 4Fe-4S binding domain ND441_RS07310 PF13247 4Fe-4S dicluster domain ND441_RS07315 PF01750 Hydrogenase maturation protease ND441_RS07320 PF07450 Formate hydrogenlyase maturation protein HycH ND441_RS07325 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND441_RS07330 PF12838 4Fe-4S dicluster domain ND441_RS07335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND441_RS07335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND441_RS07335 PF00374 Nickel-dependent hydrogenase ND441_RS07340 PF00146 NADH dehydrogenase ND441_RS07345 PF00361 Proton-conducting membrane transporter ND441_RS07350 PF13247 4Fe-4S dicluster domain ND441_RS07355 PF11046 Transcriptional repressor of hyc and hyp operons ND441_RS07360 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ND441_RS07365 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND441_RS07370 PF01455 HupF/HypC family ND441_RS07375 PF01924 Hydrogenase formation hypA family ND441_RS07380 PF00586 AIR synthase related protein, N-terminal domain ND441_RS07380 PF02769 AIR synthase related protein, C-terminal domain ND441_RS07385 PF01590 GAF domain ND441_RS07385 PF02954 Bacterial regulatory protein, Fis family ND441_RS07385 PF00158 Sigma-54 interaction domain ND441_RS07395 PF13954 PapC N-terminal domain ND441_RS07395 PF00577 Outer membrane usher protein ND441_RS07400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS07400 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS07415 PF12833 Helix-turn-helix domain ND441_RS07420 PF06071 Protein of unknown function (DUF933) ND441_RS07420 PF01926 50S ribosome-binding GTPase ND441_RS07430 PF01195 Peptidyl-tRNA hydrolase ND441_RS07435 PF10762 Protein of unknown function (DUF2583) ND441_RS07440 PF14572 Phosphoribosyl synthetase-associated domain ND441_RS07440 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ND441_RS07445 PF08544 GHMP kinases C terminal ND441_RS07445 PF00288 GHMP kinases N terminal domain ND441_RS07450 PF03550 Outer membrane lipoprotein LolB ND441_RS07455 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ND441_RS07455 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ND441_RS07455 PF01488 Shikimate / quinate 5-dehydrogenase ND441_RS07460 PF03462 PCRF domain ND441_RS07460 PF00472 RF-1 domain ND441_RS07465 PF17827 PrmC N-terminal domain ND441_RS07465 PF13847 Methyltransferase domain ND441_RS07470 PF04247 Invasion gene expression up-regulator, SirB ND441_RS07475 PF13369 Transglutaminase-like superfamily ND441_RS07480 PF00793 DAHP synthetase I family ND441_RS07485 PF01740 STAS domain ND441_RS07485 PF00916 Sulfate permease family ND441_RS07490 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS07500 PF03009 Glycerophosphoryl diester phosphodiesterase family ND441_RS07510 PF00854 POT family ND441_RS07515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND441_RS07520 PF02811 PHP domain ND441_RS07525 PF02613 Nitrate reductase delta subunit ND441_RS07530 PF07273 Protein of unknown function (DUF1439) ND441_RS07540 PF07690 Major Facilitator Superfamily ND441_RS07545 PF13302 Acetyltransferase (GNAT) domain ND441_RS07550 PF04337 Protein of unknown function, DUF480 ND441_RS07555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND441_RS07560 PF03023 Lipid II flippase MurJ ND441_RS07565 PF08479 POTRA domain, ShlB-type ND441_RS07565 PF17287 POTRA domain ND441_RS07565 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND441_RS07570 PF13332 Hemagglutinin repeat ND441_RS07570 PF05860 haemagglutination activity domain ND441_RS07580 PF03485 Arginyl tRNA synthetase N terminal domain ND441_RS07580 PF05746 DALR anticodon binding domain ND441_RS07580 PF00750 tRNA synthetases class I (R) ND441_RS07585 PF06185 YecM protein ND441_RS07590 PF03932 CutC family ND441_RS07595 PF08003 Protein of unknown function (DUF1698) ND441_RS07600 PF13649 Methyltransferase domain ND441_RS07605 PF01124 MAPEG family ND441_RS07610 PF01904 Protein of unknown function DUF72 ND441_RS07620 PF02938 GAD domain ND441_RS07620 PF00152 tRNA synthetases class II (D, K and N) ND441_RS07620 PF01336 OB-fold nucleic acid binding domain ND441_RS07625 PF00293 NUDIX domain ND441_RS07630 PF01709 Transcriptional regulator ND441_RS07635 PF02075 Crossover junction endodeoxyribonuclease RuvC ND441_RS07640 PF01330 RuvA N terminal domain ND441_RS07640 PF07499 RuvA, C-terminal domain ND441_RS07645 PF17864 RuvB AAA lid domain ND441_RS07645 PF05491 RuvB C-terminal winged helix domain ND441_RS07645 PF05496 Holliday junction DNA helicase RuvB P-loop domain ND441_RS07650 PF00854 POT family ND441_RS07655 PF00950 ABC 3 transport family ND441_RS07660 PF00005 ABC transporter ND441_RS07665 PF01297 Zinc-uptake complex component A periplasmic ND441_RS07670 PF01551 Peptidase family M23 ND441_RS07670 PF01476 LysM domain ND441_RS07670 PF08525 Opacity-associated protein A N-terminal motif ND441_RS07675 PF03279 Bacterial lipid A biosynthesis acyltransferase ND441_RS07680 PF00224 Pyruvate kinase, barrel domain ND441_RS07680 PF02887 Pyruvate kinase, alpha/beta domain ND441_RS07685 PF01418 Helix-turn-helix domain, rpiR family ND441_RS07685 PF01380 SIS domain ND441_RS07690 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ND441_RS07690 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ND441_RS07695 PF01081 KDPG and KHG aldolase ND441_RS07700 PF00893 Small Multidrug Resistance protein ND441_RS07705 PF00893 Small Multidrug Resistance protein ND441_RS07710 PF01042 Endoribonuclease L-PSP ND441_RS07715 PF13307 Helicase C-terminal domain ND441_RS07715 PF04851 Type III restriction enzyme, res subunit ND441_RS07720 PF00814 Glycoprotease family ND441_RS07725 PF03843 Outer membrane lipoprotein Slp family ND441_RS07730 PF00501 AMP-binding enzyme ND441_RS07730 PF13193 AMP-binding enzyme C-terminal domain ND441_RS07735 PF00570 HRDC domain ND441_RS07735 PF01612 3'-5' exonuclease ND441_RS07740 PF03776 Septum formation topological specificity factor MinE ND441_RS07745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ND441_RS07750 PF03775 Septum formation inhibitor MinC, C-terminal domain ND441_RS07750 PF05209 Septum formation inhibitor MinC, N-terminal domain ND441_RS07755 PF05166 YcgL domain ND441_RS07760 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND441_RS07765 PF03692 Putative zinc- or iron-chelating domain ND441_RS07780 PF02600 Disulfide bond formation protein DsbB ND441_RS07785 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ND441_RS07790 PF07840 FadR C-terminal domain ND441_RS07790 PF00392 Bacterial regulatory proteins, gntR family ND441_RS07795 PF04293 SpoVR like protein ND441_RS07800 PF01266 FAD dependent oxidoreductase ND441_RS07805 PF01168 Alanine racemase, N-terminal domain ND441_RS07805 PF00842 Alanine racemase, C-terminal domain ND441_RS07810 PF07690 Major Facilitator Superfamily ND441_RS07820 PF00563 EAL domain ND441_RS07820 PF13426 PAS domain ND441_RS07820 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS07825 PF03466 LysR substrate binding domain ND441_RS07830 PF03306 Alpha-acetolactate decarboxylase ND441_RS07835 PF00205 Thiamine pyrophosphate enzyme, central domain ND441_RS07835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND441_RS07835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND441_RS07840 PF04285 Protein of unknown function (DUF444) ND441_RS07845 PF08298 PrkA AAA domain ND441_RS07845 PF06798 PrkA serine protein kinase C-terminal domain ND441_RS07855 PF06629 MltA-interacting protein MipA ND441_RS07860 PF00884 Sulfatase ND441_RS07865 PF01263 Aldose 1-epimerase ND441_RS07870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND441_RS07870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND441_RS07875 PF01641 SelR domain ND441_RS07880 PF07023 Protein of unknown function (DUF1315) ND441_RS07885 PF00857 Isochorismatase family ND441_RS07890 PF00710 Asparaginase, N-terminal ND441_RS07890 PF17763 Glutaminase/Asparaginase C-terminal domain ND441_RS07895 PF01343 Peptidase family S49 ND441_RS07900 PF00881 Nitroreductase family ND441_RS07905 PF00586 AIR synthase related protein, N-terminal domain ND441_RS07905 PF02769 AIR synthase related protein, C-terminal domain ND441_RS07910 PF01751 Toprim domain ND441_RS07910 PF01131 DNA topoisomerase ND441_RS07915 PF07383 Protein of unknown function (DUF1496) ND441_RS07920 PF00293 NUDIX domain ND441_RS07925 PF03372 Endonuclease/Exonuclease/phosphatase family ND441_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS07935 PF03466 LysR substrate binding domain ND441_RS07955 PF00551 Formyl transferase ND441_RS07955 PF01842 ACT domain ND441_RS07960 PF02810 SEC-C motif ND441_RS07965 PF01734 Patatin-like phospholipase ND441_RS07970 PF00072 Response regulator receiver domain ND441_RS07975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND441_RS07975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND441_RS07975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND441_RS07980 PF00816 H-NS histone family ND441_RS07985 PF00265 Thymidine kinase ND441_RS07990 PF00171 Aldehyde dehydrogenase family ND441_RS07990 PF00465 Iron-containing alcohol dehydrogenase ND441_RS08000 PF01914 MarC family integral membrane protein ND441_RS08005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS08010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS08015 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS08020 PF12911 N-terminal TM domain of oligopeptide transport permease C ND441_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS08025 PF00005 ABC transporter ND441_RS08025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND441_RS08030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND441_RS08030 PF00005 ABC transporter ND441_RS08035 PF04269 Protein of unknown function, DUF440 ND441_RS08040 PF13091 PLD-like domain ND441_RS08040 PF13396 Phospholipase_D-nuclease N-terminal ND441_RS08065 PF03795 YCII-related domain ND441_RS08080 PF00486 Transcriptional regulatory protein, C terminal ND441_RS08090 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS08090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS08095 PF13954 PapC N-terminal domain ND441_RS08095 PF00577 Outer membrane usher protein ND441_RS08095 PF13953 PapC C-terminal domain ND441_RS08115 PF03544 Gram-negative bacterial TonB protein C-terminal ND441_RS08120 PF03061 Thioesterase superfamily ND441_RS08125 PF04279 Intracellular septation protein A ND441_RS08130 PF00916 Sulfate permease family ND441_RS08130 PF01740 STAS domain ND441_RS08140 PF03692 Putative zinc- or iron-chelating domain ND441_RS08145 PF03922 OmpW family ND441_RS08155 PF00290 Tryptophan synthase alpha chain ND441_RS08160 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS08165 PF00218 Indole-3-glycerol phosphate synthase ND441_RS08165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ND441_RS08170 PF02885 Glycosyl transferase family, helical bundle domain ND441_RS08170 PF00591 Glycosyl transferase family, a/b domain ND441_RS08175 PF00117 Glutamine amidotransferase class-I ND441_RS08180 PF04715 Anthranilate synthase component I, N terminal region ND441_RS08180 PF00425 chorismate binding enzyme ND441_RS08185 PF02811 PHP domain ND441_RS08190 PF01300 Telomere recombination ND441_RS08210 PF00849 RNA pseudouridylate synthase ND441_RS08210 PF01479 S4 domain ND441_RS08215 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ND441_RS08220 PF00106 short chain dehydrogenase ND441_RS08225 PF01343 Peptidase family S49 ND441_RS08225 PF08496 Peptidase family S49 N-terminal ND441_RS08230 PF10692 Protein of unknown function (DUF2498) ND441_RS08235 PF08272 Topoisomerase I zinc-ribbon-like ND441_RS08235 PF01131 DNA topoisomerase ND441_RS08235 PF01751 Toprim domain ND441_RS08235 PF01396 Topoisomerase DNA binding C4 zinc finger ND441_RS08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS08240 PF03466 LysR substrate binding domain ND441_RS08255 PF00330 Aconitase family (aconitate hydratase) ND441_RS08255 PF00694 Aconitase C-terminal domain ND441_RS08260 PF00925 GTP cyclohydrolase II ND441_RS08265 PF01569 PAP2 superfamily ND441_RS08270 PF06305 Lipopolysaccharide assembly protein A domain ND441_RS08275 PF18073 Rubredoxin metal binding domain ND441_RS08285 PF07338 Protein of unknown function (DUF1471) ND441_RS08290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND441_RS08295 PF01253 Translation initiation factor SUI1 ND441_RS08300 PF05433 Glycine zipper 2TM domain ND441_RS08305 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND441_RS08310 PF08448 PAS fold ND441_RS08310 PF08447 PAS fold ND441_RS08310 PF13426 PAS domain ND441_RS08310 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS08310 PF00563 EAL domain ND441_RS08310 PF05231 MASE1 ND441_RS08315 PF08206 Ribonuclease B OB domain ND441_RS08315 PF00773 RNB domain ND441_RS08315 PF00575 S1 RNA binding domain ND441_RS08320 PF10576 Iron-sulfur binding domain of endonuclease III ND441_RS08320 PF00633 Helix-hairpin-helix motif ND441_RS08320 PF00730 HhH-GPD superfamily base excision DNA repair protein ND441_RS08325 PF02508 Rnf-Nqr subunit, membrane protein ND441_RS08330 PF04205 FMN-binding domain ND441_RS08335 PF03116 NQR2, RnfD, RnfE family ND441_RS08340 PF12833 Helix-turn-helix domain ND441_RS08340 PF06445 GyrI-like small molecule binding domain ND441_RS08345 PF13375 RnfC Barrel sandwich hybrid domain ND441_RS08345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND441_RS08345 PF13237 4Fe-4S dicluster domain ND441_RS08345 PF10531 SLBB domain ND441_RS08350 PF04060 Putative Fe-S cluster ND441_RS08355 PF02508 Rnf-Nqr subunit, membrane protein ND441_RS08360 PF10754 Protein of unknown function (DUF2569) ND441_RS08365 PF01268 Formate--tetrahydrofolate ligase ND441_RS08370 PF09313 Domain of unknown function (DUF1971) ND441_RS08370 PF03848 Tellurite resistance protein TehB ND441_RS08375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND441_RS08375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND441_RS08380 PF13593 SBF-like CPA transporter family (DUF4137) ND441_RS08385 PF00962 Adenosine/AMP deaminase ND441_RS08390 PF06097 Bacterial protein of unknown function (DUF945) ND441_RS08395 PF01238 Phosphomannose isomerase type I ND441_RS08400 PF10415 Fumarase C C-terminus ND441_RS08400 PF00206 Lyase ND441_RS08405 PF05472 DNA replication terminus site-binding protein (Ter protein) ND441_RS08410 PF00480 ROK family ND441_RS08420 PF00654 Voltage gated chloride channel ND441_RS08425 PF06649 Protein of unknown function (DUF1161) ND441_RS08430 PF06932 Protein of unknown function (DUF1283) ND441_RS08435 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ND441_RS08440 PF00106 short chain dehydrogenase ND441_RS08445 PF01510 N-acetylmuramoyl-L-alanine amidase ND441_RS08465 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ND441_RS08465 PF01048 Phosphorylase superfamily ND441_RS08505 PF13419 Haloacid dehalogenase-like hydrolase ND441_RS08515 PF06445 GyrI-like small molecule binding domain ND441_RS08520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND441_RS08520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ND441_RS08525 PF00027 Cyclic nucleotide-binding domain ND441_RS08525 PF13545 Crp-like helix-turn-helix domain ND441_RS08530 PF00582 Universal stress protein family ND441_RS08540 PF00455 DeoR C terminal sensor domain ND441_RS08540 PF08220 DeoR-like helix-turn-helix domain ND441_RS08545 PF03611 PTS system sugar-specific permease component ND441_RS08550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND441_RS08555 PF00596 Class II Aldolase and Adducin N-terminal domain ND441_RS08560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND441_RS08565 PF01261 Xylose isomerase-like TIM barrel ND441_RS08570 PF02233 NAD(P) transhydrogenase beta subunit ND441_RS08575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ND441_RS08575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ND441_RS08575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ND441_RS08580 PF07338 Protein of unknown function (DUF1471) ND441_RS08585 PF13520 Amino acid permease ND441_RS08595 PF00072 Response regulator receiver domain ND441_RS08595 PF00486 Transcriptional regulatory protein, C terminal ND441_RS08600 PF00672 HAMP domain ND441_RS08600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS08600 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS08605 PF00080 Copper/zinc superoxide dismutase (SODC) ND441_RS08610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND441_RS08615 PF12833 Helix-turn-helix domain ND441_RS08620 PF01161 Phosphatidylethanolamine-binding protein ND441_RS08625 PF06392 Acid shock protein repeat ND441_RS08630 PF00089 Trypsin ND441_RS08635 PF00270 DEAD/DEAH box helicase ND441_RS08635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ND441_RS08635 PF11898 Domain of unknown function (DUF3418) ND441_RS08635 PF04408 Helicase associated domain (HA2) ND441_RS08635 PF00271 Helicase conserved C-terminal domain ND441_RS08640 PF02525 Flavodoxin-like fold ND441_RS08645 PF07027 Protein of unknown function (DUF1318) ND441_RS08650 PF13617 YnbE-like lipoprotein ND441_RS08660 PF11739 Dicarboxylate transport ND441_RS08665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND441_RS08665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND441_RS08670 PF03724 META domain ND441_RS08675 PF03891 Domain of unknown function (DUF333) ND441_RS08680 PF02308 MgtC family ND441_RS08685 PF00893 Small Multidrug Resistance protein ND441_RS08690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND441_RS08690 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ND441_RS08690 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ND441_RS08690 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ND441_RS08690 PF10371 Domain of unknown function ND441_RS08695 PF01171 PP-loop family ND441_RS08700 PF01544 CorA-like Mg2+ transporter protein ND441_RS08705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS08710 PF00246 Zinc carboxypeptidase ND441_RS08715 PF13378 Enolase C-terminal domain-like ND441_RS08715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND441_RS08720 PF08534 Redoxin ND441_RS08725 PF18024 Helix-turn-helix domain ND441_RS08725 PF00158 Sigma-54 interaction domain ND441_RS08730 PF09722 Protein of unknown function (DUF2384) ND441_RS08735 PF08808 RES domain ND441_RS08740 PF05128 Domain of unknown function (DUF697) ND441_RS08745 PF04317 YcjX-like family, DUF463 ND441_RS08750 PF09584 Phage shock protein PspD (Phageshock_PspD) ND441_RS08755 PF04024 PspC domain ND441_RS08760 PF06667 Phage shock protein B ND441_RS08765 PF04012 PspA/IM30 family ND441_RS08770 PF00158 Sigma-54 interaction domain ND441_RS08770 PF02954 Bacterial regulatory protein, Fis family ND441_RS08780 PF02917 Pertussis toxin, subunit 1 ND441_RS08785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS08790 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS08795 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS08795 PF12911 N-terminal TM domain of oligopeptide transport permease C ND441_RS08800 PF00005 ABC transporter ND441_RS08800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND441_RS08805 PF00005 ABC transporter ND441_RS08815 PF00854 POT family ND441_RS08825 PF01556 DnaJ C terminal domain ND441_RS08825 PF00226 DnaJ domain ND441_RS08835 PF04893 Yip1 domain ND441_RS08845 PF11656 YjbD family (DUF3811) ND441_RS08850 PF02798 Glutathione S-transferase, N-terminal domain ND441_RS08850 PF00043 Glutathione S-transferase, C-terminal domain ND441_RS08855 PF08543 Phosphomethylpyrimidine kinase ND441_RS08860 PF00579 tRNA synthetases class I (W and Y) ND441_RS08860 PF01479 S4 domain ND441_RS08865 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ND441_RS08865 PF01243 Pyridoxamine 5'-phosphate oxidase ND441_RS08870 PF03702 Anhydro-N-acetylmuramic acid kinase ND441_RS08875 PF05433 Glycine zipper 2TM domain ND441_RS08880 PF01047 MarR family ND441_RS08890 PF00248 Aldo/keto reductase family ND441_RS08895 PF06945 Protein of unknown function (DUF1289) ND441_RS08900 PF08019 Phosphoethanolamine transferase EptA/EptB ND441_RS08900 PF00884 Sulfatase ND441_RS08905 PF16925 Tetracyclin repressor-like, C-terminal domain ND441_RS08905 PF00440 Bacterial regulatory proteins, tetR family ND441_RS08910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND441_RS08915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND441_RS08920 PF00929 Exonuclease ND441_RS08925 PF00462 Glutaredoxin ND441_RS08930 PF00877 NlpC/P60 family ND441_RS08935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND441_RS08935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND441_RS08945 PF00356 Bacterial regulatory proteins, lacI family ND441_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS08950 PF03466 LysR substrate binding domain ND441_RS08955 PF07690 Major Facilitator Superfamily ND441_RS08965 PF00677 Lumazine binding domain ND441_RS08970 PF01554 MatE ND441_RS08990 PF02887 Pyruvate kinase, alpha/beta domain ND441_RS08990 PF00224 Pyruvate kinase, barrel domain ND441_RS08995 PF04728 Lipoprotein leucine-zipper ND441_RS09000 PF01476 LysM domain ND441_RS09000 PF17969 L,D-transpeptidase C-terminal domain ND441_RS09000 PF03734 L,D-transpeptidase catalytic domain ND441_RS09005 PF02657 Fe-S metabolism associated domain ND441_RS09010 PF00266 Aminotransferase class-V ND441_RS09015 PF01458 Uncharacterized protein family (UPF0051) ND441_RS09020 PF00005 ABC transporter ND441_RS09025 PF01458 Uncharacterized protein family (UPF0051) ND441_RS09030 PF01521 Iron-sulphur cluster biosynthesis ND441_RS09035 PF03061 Thioesterase superfamily ND441_RS09040 PF01565 FAD binding domain ND441_RS09040 PF02913 FAD linked oxidases, C-terminal domain ND441_RS09040 PF13183 4Fe-4S dicluster domain ND441_RS09045 PF01594 AI-2E family transporter ND441_RS09055 PF00391 PEP-utilising enzyme, mobile domain ND441_RS09055 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ND441_RS09055 PF02896 PEP-utilising enzyme, TIM barrel domain ND441_RS09060 PF03618 Kinase/pyrophosphorylase ND441_RS09065 PF00793 DAHP synthetase I family ND441_RS09070 PF10636 Hemin uptake protein hemP ND441_RS09075 PF00593 TonB dependent receptor ND441_RS09075 PF07715 TonB-dependent Receptor Plug Domain ND441_RS09080 PF05171 Haemin-degrading HemS.ChuX domain ND441_RS09085 PF01497 Periplasmic binding protein ND441_RS09090 PF01032 FecCD transport family ND441_RS09095 PF00005 ABC transporter ND441_RS09100 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ND441_RS09105 PF10437 Bacterial lipoate protein ligase C-terminus ND441_RS09105 PF03099 Biotin/lipoate A/B protein ligase family ND441_RS09110 PF00877 NlpC/P60 family ND441_RS09120 PF00892 EamA-like transporter family ND441_RS09125 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ND441_RS09130 PF01522 Polysaccharide deacetylase ND441_RS09135 PF01370 NAD dependent epimerase/dehydratase family ND441_RS09135 PF02911 Formyl transferase, C-terminal domain ND441_RS09135 PF00551 Formyl transferase ND441_RS09140 PF00535 Glycosyl transferase family 2 ND441_RS09145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND441_RS09150 PF00005 ABC transporter ND441_RS09155 PF01032 FecCD transport family ND441_RS09160 PF00145 C-5 cytosine-specific DNA methylase ND441_RS09160 PF13411 MerR HTH family regulatory protein ND441_RS09165 PF09553 Eco47II restriction endonuclease ND441_RS09200 PF02661 Fic/DOC family ND441_RS09215 PF05154 TM2 domain ND441_RS09220 PF00216 Bacterial DNA-binding protein ND441_RS09225 PF03483 B3/4 domain ND441_RS09225 PF03484 tRNA synthetase B5 domain ND441_RS09225 PF03147 Ferredoxin-fold anticodon binding domain ND441_RS09225 PF01588 Putative tRNA binding domain ND441_RS09225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ND441_RS09230 PF01409 tRNA synthetases class II core domain (F) ND441_RS09230 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ND441_RS09235 PF00453 Ribosomal protein L20 ND441_RS09240 PF01632 Ribosomal protein L35 ND441_RS09245 PF00707 Translation initiation factor IF-3, C-terminal domain ND441_RS09245 PF05198 Translation initiation factor IF-3, N-terminal domain ND441_RS09250 PF03129 Anticodon binding domain ND441_RS09250 PF02824 TGS domain ND441_RS09250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND441_RS09250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND441_RS09280 PF01914 MarC family integral membrane protein ND441_RS09285 PF01464 Transglycosylase SLT domain ND441_RS09290 PF01297 Zinc-uptake complex component A periplasmic ND441_RS09295 PF00005 ABC transporter ND441_RS09300 PF00950 ABC 3 transport family ND441_RS09305 PF00950 ABC 3 transport family ND441_RS09310 PF03881 Fructosamine kinase ND441_RS09315 PF14002 YniB-like protein ND441_RS09320 PF13419 Haloacid dehalogenase-like hydrolase ND441_RS09325 PF04307 LexA-binding, inner membrane-associated putative hydrolase ND441_RS09330 PF00375 Sodium:dicarboxylate symporter family ND441_RS09335 PF01510 N-acetylmuramoyl-L-alanine amidase ND441_RS09340 PF09339 IclR helix-turn-helix domain ND441_RS09340 PF01614 Bacterial transcriptional regulator ND441_RS09345 PF07690 Major Facilitator Superfamily ND441_RS09355 PF01435 Peptidase family M48 ND441_RS09360 PF11818 C-terminal domain of tail specific protease (DUF3340) ND441_RS09360 PF00595 PDZ domain ND441_RS09360 PF03572 Peptidase family S41 ND441_RS09360 PF17804 Tail specific protease N-terminal domain ND441_RS09365 PF04352 ProQ/FINO family ND441_RS09365 PF17516 ProQ C-terminal domain ND441_RS09370 PF13185 GAF domain ND441_RS09375 PF04403 Paraquat-inducible protein A ND441_RS09380 PF02470 MlaD protein ND441_RS09385 PF00360 Phytochrome region ND441_RS09385 PF01590 GAF domain ND441_RS09385 PF00563 EAL domain ND441_RS09385 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS09390 PF07351 Protein of unknown function (DUF1480) ND441_RS09415 PF05643 Putative bacterial lipoprotein (DUF799) ND441_RS09425 PF03783 Curli production assembly/transport component CsgG ND441_RS09430 PF10753 Toxin GhoT_OrtT ND441_RS09450 PF00144 Beta-lactamase ND441_RS09595 PF00959 Phage lysozyme ND441_RS09600 PF04971 Bacteriophage P21 holin S ND441_RS09620 PF07102 Protein of unknown function (DUF1364) ND441_RS09630 PF05063 MT-A70 ND441_RS09635 PF01555 DNA methylase ND441_RS09645 PF17854 FtsK alpha domain ND441_RS09645 PF09397 Ftsk gamma domain ND441_RS09645 PF01580 FtsK/SpoIIIE family ND441_RS09645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND441_RS09685 PF01381 Helix-turn-helix ND441_RS09685 PF00717 Peptidase S24-like ND441_RS09750 PF07825 Excisionase-like protein ND441_RS09760 PF10709 Protein of unknown function (DUF2511) ND441_RS09765 PF05425 Copper resistance protein D ND441_RS09770 PF04234 CopC domain ND441_RS09775 PF00210 Ferritin-like domain ND441_RS09780 PF06440 DNA polymerase III, theta subunit ND441_RS09785 PF00561 alpha/beta hydrolase fold ND441_RS09795 PF00326 Prolyl oligopeptidase family ND441_RS09795 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ND441_RS09800 PF13995 YebF-like protein ND441_RS09805 PF04266 ASCH domain ND441_RS09810 PF07130 YebG protein ND441_RS09815 PF03880 DbpA RNA binding domain ND441_RS09815 PF00270 DEAD/DEAH box helicase ND441_RS09815 PF00271 Helicase conserved C-terminal domain ND441_RS09820 PF02222 ATP-grasp domain ND441_RS09825 PF03701 Uncharacterised protein family (UPF0181) ND441_RS09830 PF04715 Anthranilate synthase component I, N terminal region ND441_RS09830 PF00425 chorismate binding enzyme ND441_RS09835 PF00293 NUDIX domain ND441_RS09840 PF03315 Serine dehydratase beta chain ND441_RS09840 PF03313 Serine dehydratase alpha chain ND441_RS09845 PF03741 Integral membrane protein TerC family ND441_RS09845 PF03471 Transporter associated domain ND441_RS09850 PF03610 PTS system fructose IIA component ND441_RS09850 PF03830 PTS system sorbose subfamily IIB component ND441_RS09855 PF03609 PTS system sorbose-specific iic component ND441_RS09860 PF03613 PTS system mannose/fructose/sorbose family IID component ND441_RS09865 PF06173 Protein of unknown function (DUF986) ND441_RS09870 PF02659 Putative manganese efflux pump ND441_RS09875 PF02441 Flavoprotein ND441_RS09890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND441_RS09890 PF02770 Acyl-CoA dehydrogenase, middle domain ND441_RS09890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND441_RS09900 PF00732 GMC oxidoreductase ND441_RS09900 PF05199 GMC oxidoreductase ND441_RS09905 PF00501 AMP-binding enzyme ND441_RS09905 PF13193 AMP-binding enzyme C-terminal domain ND441_RS09905 PF00668 Condensation domain ND441_RS09905 PF00550 Phosphopantetheine attachment site ND441_RS09910 PF07690 Major Facilitator Superfamily ND441_RS09930 PF13847 Methyltransferase domain ND441_RS09935 PF03717 Penicillin-binding Protein dimerisation domain ND441_RS09935 PF00905 Penicillin binding protein transpeptidase domain ND441_RS09940 PF02578 Multi-copper polyphenol oxidoreductase laccase ND441_RS09945 PF00313 'Cold-shock' DNA-binding domain ND441_RS09950 PF10736 Protein of unknown function (DUF2627) ND441_RS09955 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ND441_RS09960 PF00324 Amino acid permease ND441_RS09975 PF13974 YebO-like protein ND441_RS09980 PF13998 MgrB protein ND441_RS09985 PF13996 YobH-like protein ND441_RS09990 PF10964 Protein of unknown function (DUF2766) ND441_RS09995 PF12833 Helix-turn-helix domain ND441_RS10010 PF13520 Amino acid permease ND441_RS10015 PF00005 ABC transporter ND441_RS10015 PF00664 ABC transporter transmembrane region ND441_RS10025 PF00563 EAL domain ND441_RS10025 PF01590 GAF domain ND441_RS10025 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS10025 PF00360 Phytochrome region ND441_RS10030 PF03372 Endonuclease/Exonuclease/phosphatase family ND441_RS10040 PF06411 HdeA/HdeB family ND441_RS10045 PF07478 D-ala D-ala ligase C-terminus ND441_RS10045 PF01820 D-ala D-ala ligase N-terminus ND441_RS10060 PF08241 Methyltransferase domain ND441_RS10065 PF00313 'Cold-shock' DNA-binding domain ND441_RS10070 PF00313 'Cold-shock' DNA-binding domain ND441_RS10075 PF00313 'Cold-shock' DNA-binding domain ND441_RS10085 PF04794 YdjC-like protein ND441_RS10090 PF12833 Helix-turn-helix domain ND441_RS10090 PF07883 Cupin domain ND441_RS10095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ND441_RS10100 PF00232 Glycosyl hydrolase family 1 ND441_RS10105 PF02378 Phosphotransferase system, EIIC ND441_RS10110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND441_RS10115 PF00849 RNA pseudouridylate synthase ND441_RS10115 PF01479 S4 domain ND441_RS10125 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ND441_RS10130 PF03553 Na+/H+ antiporter family ND441_RS10140 PF13520 Amino acid permease ND441_RS10155 PF00849 RNA pseudouridylate synthase ND441_RS10160 PF00282 Pyridoxal-dependent decarboxylase conserved domain ND441_RS10165 PF13520 Amino acid permease ND441_RS10170 PF04960 Glutaminase ND441_RS10200 PF13673 Acetyltransferase (GNAT) domain ND441_RS10210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ND441_RS10210 PF00034 Cytochrome c ND441_RS10220 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS10225 PF00005 ABC transporter ND441_RS10235 PF00672 HAMP domain ND441_RS10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS10235 PF02203 Tar ligand binding domain homologue ND441_RS10240 PF13276 HTH-like domain ND441_RS10240 PF00665 Integrase core domain ND441_RS10240 PF13333 Integrase core domain ND441_RS10260 PF01066 CDP-alcohol phosphatidyltransferase ND441_RS10265 PF08459 UvrC Helix-hairpin-helix N-terminal ND441_RS10265 PF02151 UvrB/uvrC motif ND441_RS10265 PF01541 GIY-YIG catalytic domain ND441_RS10270 PF00072 Response regulator receiver domain ND441_RS10270 PF00196 Bacterial regulatory proteins, luxR family ND441_RS10275 PF10769 Protein of unknown function (DUF2594) ND441_RS10295 PF00324 Amino acid permease ND441_RS10300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND441_RS10300 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND441_RS10300 PF01276 Orn/Lys/Arg decarboxylase, major domain ND441_RS10305 PF13520 Amino acid permease ND441_RS10310 PF18500 CadC C-terminal domain 1 ND441_RS10310 PF00486 Transcriptional regulatory protein, C terminal ND441_RS10315 PF00474 Sodium:solute symporter family ND441_RS10320 PF00171 Aldehyde dehydrogenase family ND441_RS10320 PF01619 Proline dehydrogenase ND441_RS10320 PF14850 DNA-binding domain of Proline dehydrogenase ND441_RS10320 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ND441_RS10325 PF00005 ABC transporter ND441_RS10330 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS10335 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS10340 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS10345 PF02899 Phage integrase, N-terminal SAM-like domain ND441_RS10350 PF04542 Sigma-70 region 2 ND441_RS10350 PF04539 Sigma-70 region 3 ND441_RS10350 PF04545 Sigma-70, region 4 ND441_RS10355 PF08884 Flagellin D3 domain ND441_RS10355 PF00700 Bacterial flagellin C-terminal helical region ND441_RS10355 PF00669 Bacterial flagellin N-terminal helical region ND441_RS10360 PF00700 Bacterial flagellin C-terminal helical region ND441_RS10360 PF08884 Flagellin D3 domain ND441_RS10360 PF00669 Bacterial flagellin N-terminal helical region ND441_RS10365 PF00700 Bacterial flagellin C-terminal helical region ND441_RS10365 PF08884 Flagellin D3 domain ND441_RS10365 PF00669 Bacterial flagellin N-terminal helical region ND441_RS10370 PF07196 Flagellin hook IN motif ND441_RS10370 PF02465 Flagellar hook-associated protein 2 N-terminus ND441_RS10370 PF07195 Flagellar hook-associated protein 2 C-terminus ND441_RS10375 PF02561 Flagellar protein FliS ND441_RS10380 PF05400 Flagellar protein FliT ND441_RS10385 PF12833 Helix-turn-helix domain ND441_RS10390 PF01966 HD domain ND441_RS10395 PF07885 Ion channel ND441_RS10395 PF02254 TrkA-N domain ND441_RS10400 PF01223 DNA/RNA non-specific endonuclease ND441_RS10410 PF02049 Flagellar hook-basal body complex protein FliE ND441_RS10415 PF01514 Secretory protein of YscJ/FliF family ND441_RS10415 PF08345 Flagellar M-ring protein C-terminal ND441_RS10420 PF01706 FliG C-terminal domain ND441_RS10420 PF14842 FliG N-terminal domain ND441_RS10420 PF14841 FliG middle domain ND441_RS10425 PF02108 Flagellar assembly protein FliH ND441_RS10430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND441_RS10430 PF18269 T3SS EscN ATPase C-terminal domain ND441_RS10435 PF02050 Flagellar FliJ protein ND441_RS10440 PF02120 Flagellar hook-length control protein FliK ND441_RS10445 PF03748 Flagellar basal body-associated protein FliL ND441_RS10450 PF02154 Flagellar motor switch protein FliM ND441_RS10450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND441_RS10455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND441_RS10455 PF16973 Flagellar motor switch protein FliN N-terminal ND441_RS10460 PF04347 Flagellar biosynthesis protein, FliO ND441_RS10465 PF00813 FliP family ND441_RS10470 PF01313 Bacterial export proteins, family 3 ND441_RS10475 PF01311 Bacterial export proteins, family 1 ND441_RS10480 PF00669 Bacterial flagellin N-terminal helical region ND441_RS10485 PF00460 Flagella basal body rod protein ND441_RS10485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND441_RS10490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ND441_RS10490 PF10135 Rod binding protein ND441_RS10495 PF02119 Flagellar P-ring protein ND441_RS10500 PF02107 Flagellar L-ring protein ND441_RS10505 PF00460 Flagella basal body rod protein ND441_RS10505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND441_RS10510 PF00460 Flagella basal body rod protein ND441_RS10510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND441_RS10515 PF07559 Flagellar basal body protein FlaE ND441_RS10515 PF00460 Flagella basal body rod protein ND441_RS10515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND441_RS10520 PF03963 Flagellar hook capping protein - N-terminal region ND441_RS10520 PF13860 FlgD Ig-like domain ND441_RS10520 PF13861 FlgD Tudor-like domain ND441_RS10525 PF00460 Flagella basal body rod protein ND441_RS10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND441_RS10530 PF00460 Flagella basal body rod protein ND441_RS10535 PF13144 Chaperone for flagella basal body P-ring formation ND441_RS10535 PF17656 FlgA N-terminal domain ND441_RS10540 PF04316 Anti-sigma-28 factor, FlgM ND441_RS10545 PF05130 FlgN protein ND441_RS10550 PF06366 Flagellar protein FlhE ND441_RS10555 PF00771 FHIPEP family ND441_RS10560 PF01312 FlhB HrpN YscU SpaS Family ND441_RS10565 PF01483 Proprotein convertase P-domain ND441_RS10565 PF00082 Subtilase family ND441_RS10570 PF00196 Bacterial regulatory proteins, luxR family ND441_RS10580 PF00419 Fimbrial protein ND441_RS10585 PF13953 PapC C-terminal domain ND441_RS10585 PF00577 Outer membrane usher protein ND441_RS10585 PF13954 PapC N-terminal domain ND441_RS10590 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS10590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS10600 PF00419 Fimbrial protein ND441_RS10630 PF04344 Chemotaxis phosphatase, CheZ ND441_RS10635 PF00072 Response regulator receiver domain ND441_RS10640 PF00072 Response regulator receiver domain ND441_RS10640 PF01339 CheB methylesterase ND441_RS10645 PF03705 CheR methyltransferase, all-alpha domain ND441_RS10645 PF01739 CheR methyltransferase, SAM binding domain ND441_RS10650 PF00672 HAMP domain ND441_RS10650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS10650 PF02203 Tar ligand binding domain homologue ND441_RS10655 PF00672 HAMP domain ND441_RS10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS10655 PF02203 Tar ligand binding domain homologue ND441_RS10660 PF01584 CheW-like domain ND441_RS10665 PF09078 CheY binding ND441_RS10665 PF01627 Hpt domain ND441_RS10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS10665 PF02895 Signal transducing histidine kinase, homodimeric domain ND441_RS10665 PF01584 CheW-like domain ND441_RS10670 PF13677 Membrane MotB of proton-channel complex MotA/MotB ND441_RS10670 PF00691 OmpA family ND441_RS10675 PF01618 MotA/TolQ/ExbB proton channel family ND441_RS10680 PF05280 Flagellar transcriptional activator (FlhC) ND441_RS10685 PF05247 Flagellar transcriptional activator (FlhD) ND441_RS10690 PF00582 Universal stress protein family ND441_RS10695 PF02308 MgtC family ND441_RS10700 PF00672 HAMP domain ND441_RS10700 PF02203 Tar ligand binding domain homologue ND441_RS10700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS10705 PF10781 Dextransucrase DSRB ND441_RS10710 PF00313 'Cold-shock' DNA-binding domain ND441_RS10720 PF00356 Bacterial regulatory proteins, lacI family ND441_RS10725 PF02929 Beta galactosidase small chain ND441_RS10725 PF16353 Domain of unknown function(DUF4981) ND441_RS10725 PF00703 Glycosyl hydrolases family 2 ND441_RS10725 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND441_RS10725 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND441_RS10730 PF00698 Acyl transferase domain ND441_RS10730 PF08240 Alcohol dehydrogenase GroES-like domain ND441_RS10730 PF00107 Zinc-binding dehydrogenase ND441_RS10730 PF16197 Ketoacyl-synthetase C-terminal extension ND441_RS10730 PF00109 Beta-ketoacyl synthase, N-terminal domain ND441_RS10730 PF02801 Beta-ketoacyl synthase, C-terminal domain ND441_RS10730 PF00550 Phosphopantetheine attachment site ND441_RS10730 PF14765 Polyketide synthase dehydratase ND441_RS10730 PF08659 KR domain ND441_RS10735 PF10777 Inner membrane protein YlaC ND441_RS10745 PF14001 YdfZ protein ND441_RS10755 PF06167 Glucose-regulated metallo-peptidase M90 ND441_RS10765 PF13356 Arm DNA-binding domain ND441_RS10765 PF00589 Phage integrase family ND441_RS10780 PF13693 Winged helix-turn-helix DNA-binding ND441_RS10815 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ND441_RS10835 PF04335 VirB8 protein ND441_RS10840 PF03524 Conjugal transfer protein ND441_RS10845 PF03743 Bacterial conjugation TrbI-like protein ND441_RS10850 PF00437 Type II/IV secretion system protein ND441_RS10865 PF18818 Metallopeptidase superfamily domain ND441_RS10865 PF08401 Domain of unknown function (DUF1738) ND441_RS10920 PF01648 4'-phosphopantetheinyl transferase superfamily ND441_RS10920 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ND441_RS10925 PF00939 Sodium:sulfate symporter transmembrane region ND441_RS10930 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ND441_RS10935 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ND441_RS10940 PF04223 Citrate lyase, alpha subunit (CitF) ND441_RS10945 PF03328 HpcH/HpaI aldolase/citrate lyase family ND441_RS10950 PF06857 Malonate decarboxylase delta subunit (MdcD) ND441_RS10955 PF08218 Citrate lyase ligase C-terminal domain ND441_RS10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS10960 PF00989 PAS fold ND441_RS10960 PF17203 Single cache domain 3 ND441_RS10960 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND441_RS10965 PF12431 Transcriptional regulator ND441_RS10965 PF00072 Response regulator receiver domain ND441_RS10970 PF00072 Response regulator receiver domain ND441_RS10970 PF00196 Bacterial regulatory proteins, luxR family ND441_RS10975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS10975 PF07730 Histidine kinase ND441_RS10975 PF05231 MASE1 ND441_RS10980 PF07690 Major Facilitator Superfamily ND441_RS10990 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS10995 PF00005 ABC transporter ND441_RS10995 PF08402 TOBE domain ND441_RS11010 PF04363 Protein of unknown function (DUF496) ND441_RS11015 PF04632 Fusaric acid resistance protein family ND441_RS11025 PF08411 Exonuclease C-terminal ND441_RS11025 PF00929 Exonuclease ND441_RS11030 PF13520 Amino acid permease ND441_RS11035 PF00593 TonB dependent receptor ND441_RS11035 PF07715 TonB-dependent Receptor Plug Domain ND441_RS11040 PF00005 ABC transporter ND441_RS11045 PF01032 FecCD transport family ND441_RS11055 PF00324 Amino acid permease ND441_RS11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS11060 PF03466 LysR substrate binding domain ND441_RS11070 PF03601 Conserved hypothetical protein 698 ND441_RS11075 PF01261 Xylose isomerase-like TIM barrel ND441_RS11080 PF02378 Phosphotransferase system, EIIC ND441_RS11080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND441_RS11085 PF00294 pfkB family carbohydrate kinase ND441_RS11090 PF00381 PTS HPr component phosphorylation site ND441_RS11090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND441_RS11095 PF00293 NUDIX domain ND441_RS11100 PF03264 NapC/NirT cytochrome c family, N-terminal region ND441_RS11105 PF18364 Molybdopterin oxidoreductase N-terminal domain ND441_RS11105 PF01568 Molydopterin dinucleotide binding domain ND441_RS11105 PF00384 Molybdopterin oxidoreductase ND441_RS11110 PF03692 Putative zinc- or iron-chelating domain ND441_RS11115 PF03222 Tryptophan/tyrosine permease family ND441_RS11125 PF08207 Elongation factor P (EF-P) KOW-like domain ND441_RS11125 PF09285 Elongation factor P, C-terminal ND441_RS11125 PF01132 Elongation factor P (EF-P) OB domain ND441_RS11130 PF03786 D-mannonate dehydratase (UxuA) ND441_RS11135 PF01232 Mannitol dehydrogenase Rossmann domain ND441_RS11135 PF08125 Mannitol dehydrogenase C-terminal domain ND441_RS11145 PF07683 Cobalamin synthesis protein cobW C-terminal domain ND441_RS11145 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND441_RS11150 PF01569 PAP2 superfamily ND441_RS11155 PF00877 NlpC/P60 family ND441_RS11160 PF12792 CSS motif domain associated with EAL ND441_RS11160 PF00563 EAL domain ND441_RS11165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND441_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS11175 PF12911 N-terminal TM domain of oligopeptide transport permease C ND441_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS11180 PF00005 ABC transporter ND441_RS11180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND441_RS11185 PF13989 YejG-like protein ND441_RS11190 PF07690 Major Facilitator Superfamily ND441_RS11195 PF01479 S4 domain ND441_RS11195 PF00849 RNA pseudouridylate synthase ND441_RS11200 PF00271 Helicase conserved C-terminal domain ND441_RS11200 PF04851 Type III restriction enzyme, res subunit ND441_RS11205 PF01386 Ribosomal L25p family ND441_RS11210 PF04245 37-kD nucleoid-associated bacterial protein ND441_RS11215 PF07208 Protein of unknown function (DUF1414) ND441_RS11220 PF11893 Domain of unknown function (DUF3413) ND441_RS11220 PF00884 Sulfatase ND441_RS11235 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND441_RS11245 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) ND441_RS11250 PF04865 Baseplate J-like protein ND441_RS11295 PF17482 Phage tail sheath C-terminal domain ND441_RS11295 PF04984 Phage tail sheath protein subtilisin-like domain ND441_RS11345 PF03354 Phage Terminase ND441_RS11365 PF03245 Bacteriophage Rz lysis protein ND441_RS11370 PF13539 D-alanyl-D-alanine carboxypeptidase ND441_RS11400 PF03793 PASTA domain ND441_RS11400 PF00069 Protein kinase domain ND441_RS11405 PF01555 DNA methylase ND441_RS11415 PF06147 Protein of unknown function (DUF968) ND441_RS11430 PF05869 DNA N-6-adenine-methyltransferase (Dam) ND441_RS11435 PF03354 Phage Terminase ND441_RS11470 PF10065 Uncharacterized conserved protein (DUF2303) ND441_RS11515 PF06183 DinI-like family ND441_RS11520 PF12706 Beta-lactamase superfamily domain ND441_RS11525 PF00144 Beta-lactamase ND441_RS11530 PF13302 Acetyltransferase (GNAT) domain ND441_RS11545 PF00267 Gram-negative porin ND441_RS11550 PF07690 Major Facilitator Superfamily ND441_RS11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS11555 PF01627 Hpt domain ND441_RS11555 PF16359 RcsD-ABL domain ND441_RS11560 PF00196 Bacterial regulatory proteins, luxR family ND441_RS11560 PF00072 Response regulator receiver domain ND441_RS11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS11565 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS11565 PF09456 RcsC Alpha-Beta-Loop (ABL) ND441_RS11565 PF00072 Response regulator receiver domain ND441_RS11570 PF03989 DNA gyrase C-terminal domain, beta-propeller ND441_RS11570 PF00521 DNA gyrase/topoisomerase IV, subunit A ND441_RS11580 PF03477 ATP cone domain ND441_RS11580 PF02867 Ribonucleotide reductase, barrel domain ND441_RS11580 PF00317 Ribonucleotide reductase, all-alpha domain ND441_RS11585 PF00268 Ribonucleotide reductase, small chain ND441_RS11590 PF00111 2Fe-2S iron-sulfur cluster binding domain ND441_RS11600 PF03974 Ecotin ND441_RS11605 PF00994 Probable molybdopterin binding domain ND441_RS11610 PF04138 GtrA-like protein ND441_RS11615 PF00535 Glycosyl transferase family 2 ND441_RS11625 PF03222 Tryptophan/tyrosine permease family ND441_RS11630 PF07437 YfaZ precursor ND441_RS11635 PF06628 Catalase-related immune-responsive ND441_RS11635 PF00199 Catalase ND441_RS11640 PF00501 AMP-binding enzyme ND441_RS11640 PF13193 AMP-binding enzyme C-terminal domain ND441_RS11645 PF13378 Enolase C-terminal domain-like ND441_RS11650 PF00378 Enoyl-CoA hydratase/isomerase ND441_RS11655 PF12697 Alpha/beta hydrolase family ND441_RS11660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND441_RS11660 PF16582 Middle domain of thiamine pyrophosphate ND441_RS11660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND441_RS11665 PF00425 chorismate binding enzyme ND441_RS11670 PF05957 Bacterial protein of unknown function (DUF883) ND441_RS11675 PF06496 Protein of unknown function (DUF1097) ND441_RS11680 PF00361 Proton-conducting membrane transporter ND441_RS11685 PF00361 Proton-conducting membrane transporter ND441_RS11690 PF00361 Proton-conducting membrane transporter ND441_RS11690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND441_RS11695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ND441_RS11700 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ND441_RS11705 PF12838 4Fe-4S dicluster domain ND441_RS11710 PF00146 NADH dehydrogenase ND441_RS11715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND441_RS11715 PF00384 Molybdopterin oxidoreductase ND441_RS11715 PF01568 Molydopterin dinucleotide binding domain ND441_RS11715 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ND441_RS11720 PF10531 SLBB domain ND441_RS11720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ND441_RS11720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND441_RS11730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND441_RS11730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND441_RS11735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND441_RS11740 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ND441_RS11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS11745 PF03466 LysR substrate binding domain ND441_RS11750 PF00155 Aminotransferase class I and II ND441_RS11760 PF03600 Citrate transporter ND441_RS11760 PF02080 TrkA-C domain ND441_RS11770 PF03887 YfbU domain ND441_RS11775 PF04217 Protein of unknown function, DUF412 ND441_RS11780 PF00871 Acetokinase family ND441_RS11785 PF07085 DRTGG domain ND441_RS11785 PF01515 Phosphate acetyl/butaryl transferase ND441_RS11790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND441_RS11790 PF00356 Bacterial regulatory proteins, lacI family ND441_RS11795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND441_RS11805 PF03611 PTS system sugar-specific permease component ND441_RS11810 PF00293 NUDIX domain ND441_RS11815 PF12850 Calcineurin-like phosphoesterase superfamily domain ND441_RS11830 PF02798 Glutathione S-transferase, N-terminal domain ND441_RS11830 PF00043 Glutathione S-transferase, C-terminal domain ND441_RS11835 PF08338 Domain of unknown function (DUF1731) ND441_RS11835 PF01370 NAD dependent epimerase/dehydratase family ND441_RS11840 PF00005 ABC transporter ND441_RS11845 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS11850 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS11855 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS11865 PF02441 Flavoprotein ND441_RS11870 PF00156 Phosphoribosyl transferase domain ND441_RS11875 PF02674 Colicin V production protein ND441_RS11880 PF05036 Sporulation related domain ND441_RS11885 PF02875 Mur ligase family, glutamate ligase domain ND441_RS11885 PF08245 Mur ligase middle domain ND441_RS11890 PF01039 Carboxyl transferase domain ND441_RS11890 PF17848 Acetyl-coA carboxylase zinc finger domain ND441_RS11895 PF09335 SNARE associated Golgi protein ND441_RS11900 PF01416 tRNA pseudouridine synthase ND441_RS11905 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND441_RS11905 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND441_RS11910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND441_RS11910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND441_RS11910 PF11890 Domain of unknown function (DUF3410) ND441_RS11930 PF00155 Aminotransferase class I and II ND441_RS11935 PF00578 AhpC/TSA family ND441_RS11965 PF02801 Beta-ketoacyl synthase, C-terminal domain ND441_RS11965 PF00109 Beta-ketoacyl synthase, N-terminal domain ND441_RS11970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ND441_RS11970 PF01266 FAD dependent oxidoreductase ND441_RS11975 PF08891 YfcL protein ND441_RS11980 PF04315 Elongation factor P hydroxylase ND441_RS11985 PF01925 Sulfite exporter TauE/SafE ND441_RS11990 PF03411 Penicillin-insensitive murein endopeptidase ND441_RS11995 PF01264 Chorismate synthase ND441_RS12000 PF05175 Methyltransferase small domain ND441_RS12005 PF01713 Smr domain ND441_RS12010 PF00300 Histidine phosphatase superfamily (branch 1) ND441_RS12015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND441_RS12015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND441_RS12015 PF00378 Enoyl-CoA hydratase/isomerase ND441_RS12020 PF00108 Thiolase, N-terminal domain ND441_RS12020 PF02803 Thiolase, C-terminal domain ND441_RS12025 PF04175 Protein of unknown function (DUF406) ND441_RS12030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ND441_RS12035 PF04333 MlaA lipoprotein ND441_RS12040 PF03918 Cytochrome C biogenesis protein ND441_RS12045 PF03918 Cytochrome C biogenesis protein ND441_RS12050 PF08534 Redoxin ND441_RS12055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ND441_RS12055 PF01578 Cytochrome C assembly protein ND441_RS12060 PF03100 CcmE ND441_RS12065 PF04995 Heme exporter protein D (CcmD) ND441_RS12070 PF01578 Cytochrome C assembly protein ND441_RS12075 PF03379 CcmB protein ND441_RS12080 PF00005 ABC transporter ND441_RS12090 PF00589 Phage integrase family ND441_RS12090 PF13356 Arm DNA-binding domain ND441_RS12090 PF14659 Phage integrase, N-terminal SAM-like domain ND441_RS12095 PF01119 DNA mismatch repair protein, C-terminal domain ND441_RS12095 PF08676 MutL C terminal dimerisation domain ND441_RS12150 PF03831 PhnA domain ND441_RS12150 PF08274 PhnA Zinc-Ribbon ND441_RS12155 PF13406 Transglycosylase SLT domain ND441_RS12170 PF01292 Prokaryotic cytochrome b561 ND441_RS12175 PF00155 Aminotransferase class I and II ND441_RS12180 PF07350 Protein of unknown function (DUF1479) ND441_RS12185 PF07694 5TMR of 5TMR-LYT ND441_RS12185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS12185 PF06580 Histidine kinase ND441_RS12190 PF04397 LytTr DNA-binding domain ND441_RS12190 PF00072 Response regulator receiver domain ND441_RS12195 PF07690 Major Facilitator Superfamily ND441_RS12200 PF02685 Glucokinase ND441_RS12210 PF03466 LysR substrate binding domain ND441_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS12220 PF01566 Natural resistance-associated macrophage protein ND441_RS12225 PF01773 Na+ dependent nucleoside transporter N-terminus ND441_RS12225 PF07662 Na+ dependent nucleoside transporter C-terminus ND441_RS12225 PF07670 Nucleoside recognition ND441_RS12260 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND441_RS12285 PF12843 Putative quorum-sensing-regulated virulence factor ND441_RS12290 PF00533 BRCA1 C Terminus (BRCT) domain ND441_RS12290 PF01653 NAD-dependent DNA ligase adenylation domain ND441_RS12290 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ND441_RS12290 PF12826 Helix-hairpin-helix motif ND441_RS12290 PF03120 NAD-dependent DNA ligase OB-fold domain ND441_RS12295 PF04354 ZipA, C-terminal FtsZ-binding domain ND441_RS12305 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS12310 PF00381 PTS HPr component phosphorylation site ND441_RS12315 PF00391 PEP-utilising enzyme, mobile domain ND441_RS12315 PF02896 PEP-utilising enzyme, TIM barrel domain ND441_RS12315 PF05524 PEP-utilising enzyme, N-terminal ND441_RS12320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND441_RS12325 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS12330 PF00005 ABC transporter ND441_RS12335 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS12340 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS12350 PF07690 Major Facilitator Superfamily ND441_RS12355 PF01418 Helix-turn-helix domain, rpiR family ND441_RS12355 PF01380 SIS domain ND441_RS12360 PF04074 YhcH/YjgK/YiaL ND441_RS12365 PF00480 ROK family ND441_RS12370 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ND441_RS12375 PF00701 Dihydrodipicolinate synthetase family ND441_RS12380 PF04261 Dyp-type peroxidase family ND441_RS12385 PF06572 Protein of unknown function (DUF1131) ND441_RS12390 PF04076 Bacterial OB fold (BOF) protein ND441_RS12440 PF00583 Acetyltransferase (GNAT) family ND441_RS12445 PF01218 Coproporphyrinogen III oxidase ND441_RS12450 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ND441_RS12455 PF00390 Malic enzyme, N-terminal domain ND441_RS12455 PF03949 Malic enzyme, NAD binding domain ND441_RS12455 PF01515 Phosphate acetyl/butaryl transferase ND441_RS12460 PF00293 NUDIX domain ND441_RS12465 PF03264 NapC/NirT cytochrome c family, N-terminal region ND441_RS12470 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ND441_RS12475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND441_RS12475 PF00384 Molybdopterin oxidoreductase ND441_RS12475 PF01568 Molydopterin dinucleotide binding domain ND441_RS12475 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND441_RS12480 PF03927 NapD protein ND441_RS12485 PF13187 4Fe-4S dicluster domain ND441_RS12485 PF12800 4Fe-4S binding domain ND441_RS12485 PF00037 4Fe-4S binding domain ND441_RS12490 PF00072 Response regulator receiver domain ND441_RS12490 PF00196 Bacterial regulatory proteins, luxR family ND441_RS12500 PF00873 AcrB/AcrD/AcrF family ND441_RS12510 PF01817 Chorismate mutase type II ND441_RS12515 PF03960 ArsC family ND441_RS12520 PF01546 Peptidase family M20/M25/M40 ND441_RS12520 PF07687 Peptidase dimerisation domain ND441_RS12525 PF02557 D-alanyl-D-alanine carboxypeptidase ND441_RS12530 PF13980 Uncharacterised protein family (UPF0370) ND441_RS12535 PF02230 Phospholipase/Carboxylesterase ND441_RS12540 PF13718 GNAT acetyltransferase 2 ND441_RS12540 PF08351 Domain of unknown function (DUF1726) ND441_RS12540 PF17176 tRNA-binding domain ND441_RS12540 PF05127 Helicase ND441_RS12545 PF04284 Protein of unknown function (DUF441) ND441_RS12550 PF01259 SAICAR synthetase ND441_RS12555 PF06804 NlpB/DapX lipoprotein ND441_RS12560 PF00701 Dihydrodipicolinate synthetase family ND441_RS12565 PF01842 ACT domain ND441_RS12570 PF00578 AhpC/TSA family ND441_RS12575 PF01594 AI-2E family transporter ND441_RS12580 PF01435 Peptidase family M48 ND441_RS12580 PF07720 Tetratricopeptide repeat ND441_RS12585 PF03960 ArsC family ND441_RS12590 PF00308 Bacterial dnaA protein ND441_RS12595 PF00860 Permease family ND441_RS12605 PF02769 AIR synthase related protein, C-terminal domain ND441_RS12605 PF00586 AIR synthase related protein, N-terminal domain ND441_RS12610 PF00551 Formyl transferase ND441_RS12615 PF13302 Acetyltransferase (GNAT) domain ND441_RS12620 PF00005 ABC transporter ND441_RS12625 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS12630 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS12635 PF02503 Polyphosphate kinase middle domain ND441_RS12635 PF13090 Polyphosphate kinase C-terminal domain 2 ND441_RS12635 PF17941 Polyphosphate kinase C-terminal domain 1 ND441_RS12635 PF13089 Polyphosphate kinase N-terminal domain ND441_RS12640 PF02541 Ppx/GppA phosphatase family ND441_RS12650 PF00571 CBS domain ND441_RS12650 PF03448 MgtE intracellular N domain ND441_RS12650 PF01769 Divalent cation transporter ND441_RS12655 PF00012 Hsp70 protein ND441_RS12665 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS12665 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS12670 PF00577 Outer membrane usher protein ND441_RS12670 PF13954 PapC N-terminal domain ND441_RS12670 PF13953 PapC C-terminal domain ND441_RS12685 PF13533 Biotin-lipoyl like ND441_RS12690 PF00873 AcrB/AcrD/AcrF family ND441_RS12695 PF00873 AcrB/AcrD/AcrF family ND441_RS12700 PF07690 Major Facilitator Superfamily ND441_RS12705 PF00672 HAMP domain ND441_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS12705 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS12710 PF00486 Transcriptional regulatory protein, C terminal ND441_RS12710 PF00072 Response regulator receiver domain ND441_RS12715 PF07411 Domain of unknown function (DUF1508) ND441_RS12720 PF01136 Peptidase family U32 ND441_RS12720 PF16325 Peptidase family U32 C-terminal domain ND441_RS12725 PF00781 Diacylglycerol kinase catalytic domain ND441_RS12740 PF08543 Phosphomethylpyrimidine kinase ND441_RS12755 PF00117 Glutamine amidotransferase class-I ND441_RS12755 PF00958 GMP synthase C terminal domain ND441_RS12755 PF02540 NAD synthase ND441_RS12760 PF00571 CBS domain ND441_RS12760 PF00478 IMP dehydrogenase / GMP reductase domain ND441_RS12765 PF02601 Exonuclease VII, large subunit ND441_RS12765 PF13742 OB-fold nucleic acid binding domain ND441_RS12770 PF07191 zinc-ribbons ND441_RS12775 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ND441_RS12775 PF01926 50S ribosome-binding GTPase ND441_RS12780 PF13360 PQQ-like domain ND441_RS12785 PF09976 Tetratricopeptide repeat-like domain ND441_RS12790 PF13393 Histidyl-tRNA synthetase ND441_RS12790 PF03129 Anticodon binding domain ND441_RS12795 PF04551 GcpE protein ND441_RS12800 PF13464 Domain of unknown function (DUF4115) ND441_RS12810 PF04055 Radical SAM superfamily ND441_RS12815 PF00334 Nucleoside diphosphate kinase ND441_RS12825 PF06832 Penicillin-Binding Protein C-terminus Family ND441_RS12825 PF00912 Transglycosylase ND441_RS12825 PF00905 Penicillin binding protein transpeptidase domain ND441_RS12830 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ND441_RS12830 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ND441_RS12830 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ND441_RS12830 PF07703 Alpha-2-macroglobulin bait region domain ND441_RS12830 PF00207 Alpha-2-macroglobulin family ND441_RS12830 PF17962 Bacterial macroglobulin domain 6 ND441_RS12830 PF01835 MG2 domain ND441_RS12830 PF07678 A-macroglobulin TED domain ND441_RS12830 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ND441_RS12835 PF14581 SseB protein C-terminal domain ND441_RS12835 PF07179 SseB protein N-terminal domain ND441_RS12840 PF12404 Peptidase ND441_RS12840 PF00883 Cytosol aminopeptidase family, catalytic domain ND441_RS12845 PF04384 Iron-sulphur cluster assembly ND441_RS12850 PF00111 2Fe-2S iron-sulfur cluster binding domain ND441_RS12855 PF00012 Hsp70 protein ND441_RS12860 PF00226 DnaJ domain ND441_RS12860 PF07743 HSCB C-terminal oligomerisation domain ND441_RS12865 PF01521 Iron-sulphur cluster biosynthesis ND441_RS12870 PF01592 NifU-like N terminal domain ND441_RS12875 PF00266 Aminotransferase class-V ND441_RS12880 PF02082 Transcriptional regulator ND441_RS12885 PF00588 SpoU rRNA Methylase family ND441_RS12890 PF00459 Inositol monophosphatase family ND441_RS12895 PF03824 High-affinity nickel-transport protein ND441_RS12900 PF06226 Protein of unknown function (DUF1007) ND441_RS12905 PF00874 PRD domain ND441_RS12910 PF12832 MFS_1 like family ND441_RS12915 PF00464 Serine hydroxymethyltransferase ND441_RS12920 PF00175 Oxidoreductase NAD-binding domain ND441_RS12920 PF00970 Oxidoreductase FAD-binding domain ND441_RS12920 PF00042 Globin ND441_RS12925 PF14502 Helix-turn-helix domain ND441_RS12925 PF14503 YhfZ C-terminal domain ND441_RS12935 PF01168 Alanine racemase, N-terminal domain ND441_RS12940 PF02126 Phosphotriesterase family ND441_RS12945 PF10941 Protein of unknown function DUF2620 ND441_RS12950 PF10797 Protein of unknown function ND441_RS12955 PF00543 Nitrogen regulatory protein P-II ND441_RS12960 PF00795 Carbon-nitrogen hydrolase ND441_RS12960 PF02540 NAD synthase ND441_RS12965 PF00072 Response regulator receiver domain ND441_RS12965 PF00158 Sigma-54 interaction domain ND441_RS12970 PF13942 YfhG lipoprotein ND441_RS12975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS12975 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS12985 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ND441_RS12985 PF02769 AIR synthase related protein, C-terminal domain ND441_RS12985 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ND441_RS12990 PF01464 Transglycosylase SLT domain ND441_RS12990 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS12995 PF14437 MafB19-like deaminase ND441_RS13005 PF00367 phosphotransferase system, EIIB ND441_RS13005 PF02378 Phosphotransferase system, EIIC ND441_RS13010 PF01380 SIS domain ND441_RS13015 PF01418 Helix-turn-helix domain, rpiR family ND441_RS13015 PF01380 SIS domain ND441_RS13020 PF12838 4Fe-4S dicluster domain ND441_RS13025 PF01648 4'-phosphopantetheinyl transferase superfamily ND441_RS13030 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ND441_RS13035 PF02565 Recombination protein O C terminal ND441_RS13035 PF11967 Recombination protein O N terminal ND441_RS13040 PF07650 KH domain ND441_RS13040 PF01926 50S ribosome-binding GTPase ND441_RS13045 PF00035 Double-stranded RNA binding motif ND441_RS13045 PF14622 Ribonuclease-III-like ND441_RS13050 PF10502 Signal peptidase, peptidase S26 ND441_RS13055 PF06421 GTP-binding protein LepA C-terminus ND441_RS13055 PF03144 Elongation factor Tu domain 2 ND441_RS13055 PF00009 Elongation factor Tu GTP binding domain ND441_RS13055 PF00679 Elongation factor G C-terminus ND441_RS13065 PF17188 MucB/RseB C-terminal domain ND441_RS13065 PF03888 MucB/RseB N-terminal domain ND441_RS13070 PF03873 Anti sigma-E protein RseA, C-terminal domain ND441_RS13070 PF03872 Anti sigma-E protein RseA, N-terminal domain ND441_RS13075 PF04542 Sigma-70 region 2 ND441_RS13075 PF08281 Sigma-70, region 4 ND441_RS13080 PF00890 FAD binding domain ND441_RS13080 PF02910 Fumarate reductase flavoprotein C-term ND441_RS13085 PF05175 Methyltransferase small domain ND441_RS13090 PF00270 DEAD/DEAH box helicase ND441_RS13090 PF00271 Helicase conserved C-terminal domain ND441_RS13095 PF12796 Ankyrin repeats (3 copies) ND441_RS13105 PF01228 Glycine radical ND441_RS13110 PF03167 Uracil DNA glycosylase superfamily ND441_RS13115 PF01025 GrpE ND441_RS13120 PF01513 ATP-NAD kinase ND441_RS13125 PF02463 RecF/RecN/SMC N terminal domain ND441_RS13130 PF04355 SmpA / OmlA family ND441_RS13135 PF03658 RnfH family Ubiquitin ND441_RS13140 PF03364 Polyketide cyclase / dehydrase and lipid transport ND441_RS13145 PF01668 SmpB protein ND441_RS13155 PF13356 Arm DNA-binding domain ND441_RS13155 PF00589 Phage integrase family ND441_RS13185 PF01926 50S ribosome-binding GTPase ND441_RS13190 PF08220 DeoR-like helix-turn-helix domain ND441_RS13190 PF13280 WYL domain ND441_RS13215 PF06067 Domain of unknown function (DUF932) ND441_RS13220 PF03230 Antirestriction protein ND441_RS13225 PF04002 RadC-like JAB domain ND441_RS13230 PF06174 Protein of unknown function (DUF987) ND441_RS13235 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ND441_RS13240 PF06755 CbtA_toxin of type IV toxin-antitoxin system ND441_RS13280 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS13280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS13285 PF13953 PapC C-terminal domain ND441_RS13285 PF13954 PapC N-terminal domain ND441_RS13285 PF00577 Outer membrane usher protein ND441_RS13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS13310 PF03466 LysR substrate binding domain ND441_RS13325 PF01527 Transposase ND441_RS13335 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND441_RS13335 PF18413 Neuraminidase-like domain ND441_RS13335 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND441_RS13335 PF18413 Neuraminidase-like domain ND441_RS13345 PF03534 Salmonella virulence plasmid 65kDa B protein ND441_RS13345 PF12255 Insecticide toxin TcdB middle/C-terminal region ND441_RS13345 PF12256 Insecticide toxin TcdB middle/N-terminal region ND441_RS13350 PF18807 Tripartite Tc toxins repeat ND441_RS13350 PF14431 YwqJ-like deaminase ND441_RS13380 PF00571 CBS domain ND441_RS13380 PF01380 SIS domain ND441_RS13385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND441_RS13385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND441_RS13395 PF02653 Branched-chain amino acid transport system / permease component ND441_RS13400 PF00005 ABC transporter ND441_RS13410 PF00561 alpha/beta hydrolase fold ND441_RS13415 PF03466 LysR substrate binding domain ND441_RS13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS13420 PF02652 L-lactate permease ND441_RS13425 PF01070 FMN-dependent dehydrogenase ND441_RS13430 PF06039 Malate:quinone oxidoreductase (Mqo) ND441_RS13435 PF00313 'Cold-shock' DNA-binding domain ND441_RS13445 PF06711 Protein of unknown function (DUF1198) ND441_RS13450 PF09400 Protein of unknown function (DUF2002) ND441_RS13465 PF07972 NrdI Flavodoxin like ND441_RS13470 PF02867 Ribonucleotide reductase, barrel domain ND441_RS13470 PF00317 Ribonucleotide reductase, all-alpha domain ND441_RS13470 PF08343 Ribonucleotide reductase N-terminal ND441_RS13475 PF00268 Ribonucleotide reductase, small chain ND441_RS13480 PF00005 ABC transporter ND441_RS13480 PF00571 CBS domain ND441_RS13485 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS13490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND441_RS13500 PF07690 Major Facilitator Superfamily ND441_RS13505 PF01047 MarR family ND441_RS13515 PF00529 HlyD membrane-fusion protein of T1SS ND441_RS13515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND441_RS13520 PF07690 Major Facilitator Superfamily ND441_RS13525 PF00588 SpoU rRNA Methylase family ND441_RS13525 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND441_RS13530 PF00085 Thioredoxin ND441_RS13535 PF03942 DTW domain ND441_RS13540 PF13607 Succinyl-CoA ligase like flavodoxin domain ND441_RS13540 PF00583 Acetyltransferase (GNAT) family ND441_RS13540 PF13380 CoA binding domain ND441_RS13545 PF13091 PLD-like domain ND441_RS13550 PF10043 Predicted periplasmic lipoprotein (DUF2279) ND441_RS13580 PF00005 ABC transporter ND441_RS13580 PF09383 NIL domain ND441_RS13585 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS13590 PF03180 NLPA lipoprotein ND441_RS13595 PF16358 RcsF lipoprotein ND441_RS13600 PF01980 tRNA-methyltransferase O ND441_RS13600 PF18389 TrmO C-terminal domain ND441_RS13605 PF04073 Aminoacyl-tRNA editing domain ND441_RS13605 PF03129 Anticodon binding domain ND441_RS13605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND441_RS13610 PF04170 NlpE N-terminal domain ND441_RS13610 PF17185 NlpE C-terminal OB domain ND441_RS13615 PF00472 RF-1 domain ND441_RS13620 PF07152 YaeQ protein ND441_RS13625 PF06786 Uncharacterised protein family (UPF0253) ND441_RS13630 PF07073 Modulator of Rho-dependent transcription termination (ROF) ND441_RS13635 PF00034 Cytochrome c ND441_RS13640 PF11734 TilS substrate C-terminal domain ND441_RS13640 PF01171 PP-loop family ND441_RS13640 PF09179 TilS substrate binding domain ND441_RS13645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND441_RS13660 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ND441_RS13665 PF14579 Helix-hairpin-helix motif ND441_RS13665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ND441_RS13665 PF07733 Bacterial DNA polymerase III alpha NTPase domain ND441_RS13665 PF01336 OB-fold nucleic acid binding domain ND441_RS13665 PF02811 PHP domain ND441_RS13670 PF01351 Ribonuclease HII ND441_RS13675 PF02684 Lipid-A-disaccharide synthetase ND441_RS13680 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ND441_RS13680 PF00132 Bacterial transferase hexapeptide (six repeats) ND441_RS13685 PF07977 FabA-like domain ND441_RS13690 PF00132 Bacterial transferase hexapeptide (six repeats) ND441_RS13690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ND441_RS13695 PF03938 Outer membrane protein (OmpH-like) ND441_RS13700 PF01103 Surface antigen ND441_RS13700 PF07244 Surface antigen variable number repeat ND441_RS13705 PF17820 PDZ domain ND441_RS13705 PF02163 Peptidase family M50 ND441_RS13715 PF01255 Putative undecaprenyl diphosphate synthase ND441_RS13720 PF13288 DXP reductoisomerase C-terminal domain ND441_RS13720 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ND441_RS13720 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ND441_RS13725 PF01765 Ribosome recycling factor ND441_RS13730 PF00696 Amino acid kinase family ND441_RS13735 PF00889 Elongation factor TS ND441_RS13740 PF00318 Ribosomal protein S2 ND441_RS13745 PF00557 Metallopeptidase family M24 ND441_RS13750 PF01966 HD domain ND441_RS13750 PF01909 Nucleotidyltransferase domain ND441_RS13750 PF01842 ACT domain ND441_RS13750 PF08335 GlnD PII-uridylyltransferase ND441_RS13755 PF00132 Bacterial transferase hexapeptide (six repeats) ND441_RS13755 PF14602 Hexapeptide repeat of succinyl-transferase ND441_RS13755 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ND441_RS13760 PF11944 Protein of unknown function (DUF3461) ND441_RS13765 PF00258 Flavodoxin ND441_RS13770 PF00849 RNA pseudouridylate synthase ND441_RS13775 PF04287 tRNA pseudouridine synthase C ND441_RS13780 PF07348 Syd protein (SUKH-2) ND441_RS13785 PF14489 QueF-like protein ND441_RS13785 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ND441_RS13790 PF03641 Possible lysine decarboxylase ND441_RS13790 PF11892 Domain of unknown function (DUF3412) ND441_RS13790 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ND441_RS13795 PF01367 5'-3' exonuclease, C-terminal SAM fold ND441_RS13795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND441_RS13800 PF01728 FtsJ-like methyltransferase ND441_RS13800 PF18125 RlmM ferredoxin-like domain ND441_RS13805 PF04241 Protein of unknown function (DUF423) ND441_RS13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS13810 PF03466 LysR substrate binding domain ND441_RS13815 PF06004 Bacterial protein of unknown function (DUF903) ND441_RS13820 PF00266 Aminotransferase class-V ND441_RS13825 PF02657 Fe-S metabolism associated domain ND441_RS13830 PF00899 ThiF family ND441_RS13835 PF06725 3D domain ND441_RS13835 PF03562 MltA specific insert domain ND441_RS13855 PF01520 N-acetylmuramoyl-L-alanine amidase ND441_RS13855 PF11741 AMIN domain ND441_RS13860 PF00696 Amino acid kinase family ND441_RS13860 PF00583 Acetyltransferase (GNAT) family ND441_RS13865 PF13538 UvrD-like helicase C-terminal domain ND441_RS13870 PF00580 UvrD/REP helicase N-terminal domain ND441_RS13870 PF13361 UvrD-like helicase C-terminal domain ND441_RS13870 PF12705 PD-(D/E)XK nuclease superfamily ND441_RS13875 PF00675 Insulinase (Peptidase family M16) ND441_RS13875 PF05193 Peptidase M16 inactive domain ND441_RS13875 PF16187 Middle or third domain of peptidase_M16 ND441_RS13880 PF17946 RecC C-terminal domain ND441_RS13885 PF07963 Prokaryotic N-terminal methylation motif ND441_RS13885 PF12528 Type II secretion prepilin peptidase dependent protein C ND441_RS13900 PF07963 Prokaryotic N-terminal methylation motif ND441_RS13900 PF00114 Pilin (bacterial filament) ND441_RS13905 PF00303 Thymidylate synthase ND441_RS13910 PF01790 Prolipoprotein diacylglyceryl transferase ND441_RS13915 PF01590 GAF domain ND441_RS13915 PF05524 PEP-utilising enzyme, N-terminal ND441_RS13915 PF00391 PEP-utilising enzyme, mobile domain ND441_RS13915 PF02896 PEP-utilising enzyme, TIM barrel domain ND441_RS13920 PF00293 NUDIX domain ND441_RS13925 PF02976 DNA mismatch repair enzyme MutH ND441_RS13930 PF03741 Integral membrane protein TerC family ND441_RS13935 PF00248 Aldo/keto reductase family ND441_RS13940 PF07690 Major Facilitator Superfamily ND441_RS13945 PF00501 AMP-binding enzyme ND441_RS13945 PF01553 Acyltransferase ND441_RS13945 PF13193 AMP-binding enzyme C-terminal domain ND441_RS13950 PF00356 Bacterial regulatory proteins, lacI family ND441_RS13955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND441_RS13955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ND441_RS13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS13960 PF03466 LysR substrate binding domain ND441_RS13965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS13965 PF03466 LysR substrate binding domain ND441_RS14005 PF11612 Type II secretion system (T2SS), protein J ND441_RS14005 PF07963 Prokaryotic N-terminal methylation motif ND441_RS14010 PF02501 Type II secretion system (T2SS), protein I ND441_RS14010 PF07963 Prokaryotic N-terminal methylation motif ND441_RS14020 PF07963 Prokaryotic N-terminal methylation motif ND441_RS14020 PF08334 Type II secretion system (T2SS), protein G ND441_RS14025 PF00482 Type II secretion system (T2SS), protein F ND441_RS14030 PF00437 Type II/IV secretion system protein ND441_RS14035 PF03958 Bacterial type II/III secretion system short domain ND441_RS14035 PF00263 Bacterial type II and III secretion system protein ND441_RS14060 PF00005 ABC transporter ND441_RS14065 PF02405 Permease MlaE ND441_RS14075 PF01336 OB-fold nucleic acid binding domain ND441_RS14075 PF00152 tRNA synthetases class II (D, K and N) ND441_RS14085 PF01368 DHH family ND441_RS14085 PF02272 DHHA1 domain ND441_RS14085 PF17768 RecJ OB domain ND441_RS14090 PF13098 Thioredoxin-like domain ND441_RS14090 PF10411 Disulfide bond isomerase protein N-terminus ND441_RS14095 PF02899 Phage integrase, N-terminal SAM-like domain ND441_RS14095 PF00589 Phage integrase family ND441_RS14100 PF00258 Flavodoxin ND441_RS14105 PF07254 Membrane-bound toxin component of toxin-antitoxin system ND441_RS14110 PF03937 Flavinator of succinate dehydrogenase ND441_RS14115 PF01571 Aminomethyltransferase folate-binding domain ND441_RS14120 PF03006 Haemolysin-III related ND441_RS14130 PF02347 Glycine cleavage system P-protein ND441_RS14135 PF01597 Glycine cleavage H-protein ND441_RS14140 PF01571 Aminomethyltransferase folate-binding domain ND441_RS14140 PF08669 Glycine cleavage T-protein C-terminal barrel domain ND441_RS14145 PF01494 FAD binding domain ND441_RS14150 PF01494 FAD binding domain ND441_RS14155 PF00557 Metallopeptidase family M24 ND441_RS14155 PF05195 Aminopeptidase P, N-terminal domain ND441_RS14160 PF03695 Uncharacterised protein family (UPF0149) ND441_RS14165 PF05164 Cell division protein ZapA ND441_RS14175 PF01812 5-formyltetrahydrofolate cyclo-ligase family ND441_RS14180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND441_RS14180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND441_RS14180 PF01842 ACT domain ND441_RS14185 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ND441_RS14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS14190 PF03466 LysR substrate binding domain ND441_RS14195 PF04402 Protein of unknown function (DUF541) ND441_RS14200 PF01810 LysE type translocator ND441_RS14205 PF00924 Mechanosensitive ion channel ND441_RS14205 PF05552 Conserved TM helix ND441_RS14210 PF01116 Fructose-bisphosphate aldolase class-II ND441_RS14215 PF00162 Phosphoglycerate kinase ND441_RS14220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND441_RS14220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND441_RS14225 PF02779 Transketolase, pyrimidine binding domain ND441_RS14225 PF02780 Transketolase, C-terminal domain ND441_RS14225 PF00456 Transketolase, thiamine diphosphate binding domain ND441_RS14235 PF17810 Arginine decarboxylase helical bundle domain ND441_RS14235 PF17944 Arginine decarboxylase C-terminal helical extension ND441_RS14235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND441_RS14240 PF02773 S-adenosylmethionine synthetase, C-terminal domain ND441_RS14240 PF02772 S-adenosylmethionine synthetase, central domain ND441_RS14240 PF00438 S-adenosylmethionine synthetase, N-terminal domain ND441_RS14250 PF04143 Sulphur transport ND441_RS14260 PF10263 SprT-like family ND441_RS14260 PF17283 SprT-like zinc ribbon domain ND441_RS14265 PF04231 Endonuclease I ND441_RS14270 PF04452 RNA methyltransferase ND441_RS14275 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ND441_RS14275 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ND441_RS14280 PF02622 Uncharacterized ACR, COG1678 ND441_RS14285 PF03652 Holliday junction resolvase ND441_RS14290 PF00795 Carbon-nitrogen hydrolase ND441_RS14295 PF04371 Porphyromonas-type peptidyl-arginine deiminase ND441_RS14300 PF00437 Type II/IV secretion system protein ND441_RS14305 PF01168 Alanine racemase, N-terminal domain ND441_RS14310 PF14748 Pyrroline-5-carboxylate reductase dimerisation ND441_RS14310 PF03807 NADP oxidoreductase coenzyme F420-dependent ND441_RS14315 PF02325 YGGT family ND441_RS14320 PF02594 Uncharacterised ACR, YggU family COG1872 ND441_RS14325 PF01725 Ham1 family ND441_RS14330 PF06969 HemN C-terminal domain ND441_RS14330 PF04055 Radical SAM superfamily ND441_RS14335 PF11101 Protein of unknown function (DUF2884) ND441_RS14340 PF04960 Glutaminase ND441_RS14345 PF04320 Protein with unknown function (DUF469) ND441_RS14350 PF02390 Putative methyltransferase ND441_RS14355 PF00730 HhH-GPD superfamily base excision DNA repair protein ND441_RS14355 PF14815 NUDIX domain ND441_RS14355 PF10576 Iron-sulfur binding domain of endonuclease III ND441_RS14355 PF00633 Helix-hairpin-helix motif ND441_RS14360 PF04362 Bacterial Fe(2+) trafficking ND441_RS14365 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ND441_RS14365 PF01464 Transglycosylase SLT domain ND441_RS14405 PF00294 pfkB family carbohydrate kinase ND441_RS14410 PF01228 Glycine radical ND441_RS14410 PF02901 Pyruvate formate lyase-like ND441_RS14415 PF00871 Acetokinase family ND441_RS14420 PF01490 Transmembrane amino acid transporter protein ND441_RS14425 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS14430 PF00501 AMP-binding enzyme ND441_RS14430 PF13193 AMP-binding enzyme C-terminal domain ND441_RS14430 PF00668 Condensation domain ND441_RS14430 PF00975 Thioesterase domain ND441_RS14430 PF00550 Phosphopantetheine attachment site ND441_RS14440 PF00857 Isochorismatase family ND441_RS14440 PF00550 Phosphopantetheine attachment site ND441_RS14445 PF00501 AMP-binding enzyme ND441_RS14445 PF13193 AMP-binding enzyme C-terminal domain ND441_RS14450 PF00425 chorismate binding enzyme ND441_RS14455 PF01497 Periplasmic binding protein ND441_RS14460 PF05977 Transmembrane secretion effector ND441_RS14465 PF01032 FecCD transport family ND441_RS14470 PF01032 FecCD transport family ND441_RS14475 PF00005 ABC transporter ND441_RS14485 PF00501 AMP-binding enzyme ND441_RS14485 PF13193 AMP-binding enzyme C-terminal domain ND441_RS14485 PF00668 Condensation domain ND441_RS14485 PF00550 Phosphopantetheine attachment site ND441_RS14485 PF00975 Thioesterase domain ND441_RS14490 PF03621 MbtH-like protein ND441_RS14495 PF11806 Domain of unknown function (DUF3327) ND441_RS14495 PF00756 Putative esterase ND441_RS14500 PF00593 TonB dependent receptor ND441_RS14500 PF07715 TonB-dependent Receptor Plug Domain ND441_RS14505 PF08501 Shikimate dehydrogenase substrate binding domain ND441_RS14530 PF04972 BON domain ND441_RS14530 PF00263 Bacterial type II and III secretion system protein ND441_RS14530 PF13629 Pilus formation protein N terminal region ND441_RS14550 PF00437 Type II/IV secretion system protein ND441_RS14590 PF02472 Biopolymer transport protein ExbD/TolR ND441_RS14595 PF01618 MotA/TolQ/ExbB proton channel family ND441_RS14600 PF01053 Cys/Met metabolism PLP-dependent enzyme ND441_RS14605 PF09335 SNARE associated Golgi protein ND441_RS14610 PF12833 Helix-turn-helix domain ND441_RS14610 PF06719 AraC-type transcriptional regulator N-terminus ND441_RS14615 PF00465 Iron-containing alcohol dehydrogenase ND441_RS14620 PF00248 Aldo/keto reductase family ND441_RS14625 PF11842 Domain of unknown function (DUF3362) ND441_RS14625 PF04055 Radical SAM superfamily ND441_RS14625 PF08497 Radical SAM N-terminal ND441_RS14630 PF07731 Multicopper oxidase ND441_RS14630 PF07732 Multicopper oxidase ND441_RS14635 PF01553 Acyltransferase ND441_RS14640 PF03989 DNA gyrase C-terminal domain, beta-propeller ND441_RS14640 PF00521 DNA gyrase/topoisomerase IV, subunit A ND441_RS14645 PF02525 Flavodoxin-like fold ND441_RS14650 PF03466 LysR substrate binding domain ND441_RS14650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS14655 PF00204 DNA gyrase B ND441_RS14655 PF00986 DNA gyrase B subunit, carboxyl terminus ND441_RS14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS14655 PF01751 Toprim domain ND441_RS14660 PF05728 Uncharacterised protein family (UPF0227) ND441_RS14665 PF00149 Calcineurin-like phosphoesterase ND441_RS14670 PF06853 Protein of unknown function (DUF1249) ND441_RS14675 PF00293 NUDIX domain ND441_RS14680 PF02321 Outer membrane efflux protein ND441_RS14685 PF06693 Protein of unknown function (DUF1190) ND441_RS14690 PF03738 Glutathionylspermidine synthase preATP-grasp ND441_RS14695 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND441_RS14700 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ND441_RS14705 PF04380 Membrane fusogenic activity ND441_RS14715 PF00294 pfkB family carbohydrate kinase ND441_RS14715 PF01467 Cytidylyltransferase-like ND441_RS14720 PF03710 Glutamate-ammonia ligase adenylyltransferase ND441_RS14720 PF08335 GlnD PII-uridylyltransferase ND441_RS14725 PF01928 CYTH domain ND441_RS14730 PF08239 Bacterial SH3 domain ND441_RS14735 PF01966 HD domain ND441_RS14735 PF01743 Poly A polymerase head domain ND441_RS14735 PF12627 Probable RNA and SrmB- binding site of polymerase A ND441_RS14740 PF02673 Bacitracin resistance protein BacA ND441_RS14745 PF02152 Dihydroneopterin aldolase ND441_RS14750 PF02660 Glycerol-3-phosphate acyltransferase ND441_RS14755 PF00814 Glycoprotease family ND441_RS14760 PF01165 Ribosomal protein S21 ND441_RS14765 PF10410 DnaB-helicase binding domain of primase ND441_RS14765 PF08278 DNA primase DnaG DnaB-binding ND441_RS14765 PF01807 CHC2 zinc finger ND441_RS14765 PF08275 DNA primase catalytic core, N-terminal domain ND441_RS14770 PF04539 Sigma-70 region 3 ND441_RS14770 PF04545 Sigma-70, region 4 ND441_RS14770 PF04542 Sigma-70 region 2 ND441_RS14770 PF04546 Sigma-70, non-essential region ND441_RS14770 PF03979 Sigma-70 factor, region 1.1 ND441_RS14770 PF00140 Sigma-70 factor, region 1.2 ND441_RS14795 PF00106 short chain dehydrogenase ND441_RS14820 PF08241 Methyltransferase domain ND441_RS14825 PF00535 Glycosyl transferase family 2 ND441_RS14860 PF13018 Extended Signal Peptide of Type V secretion system ND441_RS14860 PF05860 haemagglutination activity domain ND441_RS14860 PF04829 Pre-toxin domain with VENN motif ND441_RS14860 PF13332 Hemagglutinin repeat ND441_RS14865 PF13018 Extended Signal Peptide of Type V secretion system ND441_RS14865 PF13332 Hemagglutinin repeat ND441_RS14865 PF05860 haemagglutination activity domain ND441_RS14865 PF04829 Pre-toxin domain with VENN motif ND441_RS14875 PF17287 POTRA domain ND441_RS14875 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND441_RS14875 PF08479 POTRA domain, ShlB-type ND441_RS14880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND441_RS14880 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS14885 PF05175 Methyltransferase small domain ND441_RS14895 PF01863 Protein of unknown function DUF45 ND441_RS14900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND441_RS14905 PF03741 Integral membrane protein TerC family ND441_RS14910 PF00375 Sodium:dicarboxylate symporter family ND441_RS14915 PF10688 Bacterial inner membrane protein ND441_RS14920 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ND441_RS14920 PF08666 SAF domain ND441_RS14925 PF08125 Mannitol dehydrogenase C-terminal domain ND441_RS14925 PF01232 Mannitol dehydrogenase Rossmann domain ND441_RS14930 PF02614 Glucuronate isomerase ND441_RS14935 PF07690 Major Facilitator Superfamily ND441_RS14940 PF07729 FCD domain ND441_RS14940 PF00392 Bacterial regulatory proteins, gntR family ND441_RS14950 PF09335 SNARE associated Golgi protein ND441_RS14955 PF13721 SecD export protein N-terminal TM region ND441_RS14965 PF05957 Bacterial protein of unknown function (DUF883) ND441_RS14970 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ND441_RS14975 PF13997 YqjK-like protein ND441_RS14980 PF07681 DoxX ND441_RS14985 PF03466 LysR substrate binding domain ND441_RS14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS14990 PF17954 Quercetinase C-terminal cupin domain ND441_RS14990 PF02678 Pirin ND441_RS15005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND441_RS15010 PF04348 LppC putative lipoprotein ND441_RS15015 PF02021 Uncharacterised protein family UPF0102 ND441_RS15020 PF13580 SIS domain ND441_RS15025 PF04972 BON domain ND441_RS15030 PF00912 Transglycosylase ND441_RS15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS15040 PF18415 Histidine kinase receptor ArcB trans-membrane domain ND441_RS15040 PF00989 PAS fold ND441_RS15040 PF00072 Response regulator receiver domain ND441_RS15040 PF01627 Hpt domain ND441_RS15040 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS15045 PF04055 Radical SAM superfamily ND441_RS15045 PF16199 Radical_SAM C-terminal domain ND441_RS15050 PF00310 Glutamine amidotransferases class-II ND441_RS15050 PF04898 Glutamate synthase central domain ND441_RS15050 PF01645 Conserved region in glutamate synthase ND441_RS15050 PF01493 GXGXG motif ND441_RS15055 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND441_RS15055 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS15065 PF04386 Stringent starvation protein B ND441_RS15070 PF00043 Glutathione S-transferase, C-terminal domain ND441_RS15070 PF02798 Glutathione S-transferase, N-terminal domain ND441_RS15075 PF00380 Ribosomal protein S9/S16 ND441_RS15080 PF00572 Ribosomal protein L13 ND441_RS15085 PF03969 AFG1-like ATPase ND441_RS15090 PF06295 Protein of unknown function (DUF1043) ND441_RS15095 PF00595 PDZ domain ND441_RS15095 PF13180 PDZ domain ND441_RS15100 PF13180 PDZ domain ND441_RS15105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND441_RS15110 PF01722 BolA-like protein ND441_RS15115 PF13466 STAS domain ND441_RS15120 PF05494 MlaC protein ND441_RS15125 PF02470 MlaD protein ND441_RS15130 PF02405 Permease MlaE ND441_RS15135 PF00005 ABC transporter ND441_RS15140 PF01699 Sodium/calcium exchanger protein ND441_RS15145 PF00571 CBS domain ND441_RS15145 PF01380 SIS domain ND441_RS15155 PF06835 Lipopolysaccharide-assembly, LptC-related ND441_RS15160 PF03968 OstA-like protein ND441_RS15165 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND441_RS15165 PF00005 ABC transporter ND441_RS15170 PF04963 Sigma-54 factor, core binding domain ND441_RS15170 PF00309 Sigma-54 factor, Activator interacting domain (AID) ND441_RS15170 PF04552 Sigma-54, DNA binding domain ND441_RS15175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND441_RS15180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND441_RS15185 PF03668 P-loop ATPase protein family ND441_RS15190 PF00381 PTS HPr component phosphorylation site ND441_RS15195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND441_RS15195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND441_RS15200 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ND441_RS15200 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ND441_RS15205 PF01042 Endoribonuclease L-PSP ND441_RS15210 PF00128 Alpha amylase, catalytic domain ND441_RS15210 PF11941 Domain of unknown function (DUF3459) ND441_RS15215 PF02378 Phosphotransferase system, EIIC ND441_RS15215 PF00367 phosphotransferase system, EIIB ND441_RS15220 PF00356 Bacterial regulatory proteins, lacI family ND441_RS15225 PF00689 Cation transporting ATPase, C-terminus ND441_RS15225 PF00690 Cation transporter/ATPase, N-terminus ND441_RS15235 PF14760 Rnk N-terminus ND441_RS15235 PF01272 Transcription elongation factor, GreA/GreB, C-term ND441_RS15240 PF07361 Cytochrome b562 ND441_RS15245 PF01523 Putative modulator of DNA gyrase ND441_RS15250 PF04751 Protein of unknown function (DUF615) ND441_RS15255 PF01337 Barstar (barnase inhibitor) ND441_RS15260 PF00545 ribonuclease ND441_RS15265 PF00171 Aldehyde dehydrogenase family ND441_RS15270 PF04632 Fusaric acid resistance protein family ND441_RS15275 PF13533 Biotin-lipoyl like ND441_RS15280 PF07869 Protein of unknown function (DUF1656) ND441_RS15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS15285 PF03466 LysR substrate binding domain ND441_RS15290 PF01523 Putative modulator of DNA gyrase ND441_RS15295 PF00795 Carbon-nitrogen hydrolase ND441_RS15300 PF13116 Protein of unknown function ND441_RS15300 PF13502 AsmA-like C-terminal region ND441_RS15305 PF10150 Ribonuclease E/G family ND441_RS15305 PF00575 S1 RNA binding domain ND441_RS15310 PF02545 Maf-like protein ND441_RS15315 PF04093 rod shape-determining protein MreD ND441_RS15320 PF04085 rod shape-determining protein MreC ND441_RS15330 PF00563 EAL domain ND441_RS15330 PF17157 Gammaproteobacterial periplasmic sensor domain ND441_RS15330 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS15335 PF08240 Alcohol dehydrogenase GroES-like domain ND441_RS15335 PF00107 Zinc-binding dehydrogenase ND441_RS15340 PF00174 Oxidoreductase molybdopterin binding domain ND441_RS15345 PF01794 Ferric reductase like transmembrane component ND441_RS15350 PF01220 Dehydroquinase class II ND441_RS15355 PF00364 Biotin-requiring enzyme ND441_RS15360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND441_RS15360 PF02785 Biotin carboxylase C-terminal domain ND441_RS15360 PF00289 Biotin carboxylase, N-terminal domain ND441_RS15365 PF06196 Protein of unknown function (DUF997) ND441_RS15370 PF00474 Sodium:solute symporter family ND441_RS15380 PF01207 Dihydrouridine synthase (Dus) ND441_RS15385 PF02954 Bacterial regulatory protein, Fis family ND441_RS15395 PF03279 Bacterial lipid A biosynthesis acyltransferase ND441_RS15400 PF00484 Carbonic anhydrase ND441_RS15405 PF04172 LrgB-like family ND441_RS15410 PF03788 LrgA family ND441_RS15415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS15415 PF03466 LysR substrate binding domain ND441_RS15420 PF00999 Sodium/hydrogen exchanger family ND441_RS15425 PF00860 Permease family ND441_RS15435 PF00436 Single-strand binding protein family ND441_RS15440 PF00005 ABC transporter ND441_RS15440 PF17755 UvrA DNA-binding domain ND441_RS15440 PF17760 UvrA interaction domain ND441_RS15445 PF04237 YjbR ND441_RS15450 PF00155 Aminotransferase class I and II ND441_RS15455 PF01168 Alanine racemase, N-terminal domain ND441_RS15455 PF00842 Alanine racemase, C-terminal domain ND441_RS15460 PF00772 DnaB-like helicase N terminal domain ND441_RS15460 PF03796 DnaB-like helicase C terminal domain ND441_RS15465 PF08240 Alcohol dehydrogenase GroES-like domain ND441_RS15465 PF00107 Zinc-binding dehydrogenase ND441_RS15470 PF09583 Phage shock protein G (Phageshock_PspG) ND441_RS15475 PF01207 Dihydrouridine synthase (Dus) ND441_RS15480 PF01475 Ferric uptake regulator family ND441_RS15485 PF01726 LexA DNA binding domain ND441_RS15485 PF00717 Peptidase S24-like ND441_RS15490 PF01219 Prokaryotic diacylglycerol kinase ND441_RS15495 PF01553 Acyltransferase ND441_RS15500 PF01040 UbiA prenyltransferase family ND441_RS15505 PF04345 Chorismate lyase ND441_RS15510 PF07148 Maltose operon periplasmic protein precursor (MalM) ND441_RS15515 PF02264 LamB porin ND441_RS15520 PF00005 ABC transporter ND441_RS15520 PF17912 MalK OB fold domain ND441_RS15530 PF01547 Bacterial extracellular solute-binding protein ND441_RS15535 PF14785 Maltose transport system permease protein MalF P2 domain ND441_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS15540 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS15545 PF06146 Phosphate-starvation-inducible E ND441_RS15550 PF00342 Phosphoglucose isomerase ND441_RS15555 PF00696 Amino acid kinase family ND441_RS15555 PF01842 ACT domain ND441_RS15560 PF08479 POTRA domain, ShlB-type ND441_RS15560 PF17287 POTRA domain ND441_RS15560 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND441_RS15565 PF13332 Hemagglutinin repeat ND441_RS15565 PF05860 haemagglutination activity domain ND441_RS15570 PF00872 Transposase, Mutator family ND441_RS15575 PF02369 Bacterial Ig-like domain (group 1) ND441_RS15575 PF11924 Inverse autotransporter, beta-domain ND441_RS15575 PF07979 Intimin C-type lectin domain ND441_RS15575 PF09134 Invasin, domain 3 ND441_RS15580 PF00872 Transposase, Mutator family ND441_RS15585 PF09134 Invasin, domain 3 ND441_RS15585 PF02369 Bacterial Ig-like domain (group 1) ND441_RS15585 PF11924 Inverse autotransporter, beta-domain ND441_RS15585 PF07979 Intimin C-type lectin domain ND441_RS15595 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ND441_RS15605 PF00004 ATPase family associated with various cellular activities (AAA) ND441_RS15605 PF17862 AAA+ lid domain ND441_RS15605 PF01434 Peptidase family M41 ND441_RS15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS15685 PF03466 LysR substrate binding domain ND441_RS15705 PF02574 Homocysteine S-methyltransferase ND441_RS15705 PF00809 Pterin binding enzyme ND441_RS15705 PF02965 Vitamin B12 dependent methionine synthase, activation domain ND441_RS15705 PF02607 B12 binding domain ND441_RS15705 PF02310 B12 binding domain ND441_RS15710 PF01614 Bacterial transcriptional regulator ND441_RS15710 PF09339 IclR helix-turn-helix domain ND441_RS15715 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ND441_RS15720 PF00463 Isocitrate lyase family ND441_RS15725 PF01274 Malate synthase ND441_RS15730 PF04204 Homoserine O-succinyltransferase ND441_RS15765 PF02142 MGS-like domain ND441_RS15765 PF01808 AICARFT/IMPCHase bienzyme ND441_RS15770 PF02843 Phosphoribosylglycinamide synthetase, C domain ND441_RS15770 PF02844 Phosphoribosylglycinamide synthetase, N domain ND441_RS15770 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ND441_RS15775 PF07356 Protein of unknown function (DUF1481) ND441_RS15780 PF00216 Bacterial DNA-binding protein ND441_RS15785 PF04222 Protein of unknown function (DUF416) ND441_RS15790 PF04493 Endonuclease V ND441_RS15795 PF01208 Uroporphyrinogen decarboxylase (URO-D) ND441_RS15800 PF00293 NUDIX domain ND441_RS15800 PF09297 NADH pyrophosphatase zinc ribbon domain ND441_RS15805 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ND441_RS15810 PF13667 ThiC-associated domain ND441_RS15810 PF01964 Radical SAM ThiC family ND441_RS15815 PF02581 Thiamine monophosphate synthase ND441_RS15820 PF00899 ThiF family ND441_RS15825 PF02597 ThiS family ND441_RS15830 PF05690 Thiazole biosynthesis protein ThiG ND441_RS15835 PF06968 Biotin and Thiamin Synthesis associated domain ND441_RS15835 PF04055 Radical SAM superfamily ND441_RS15840 PF00623 RNA polymerase Rpb1, domain 2 ND441_RS15840 PF04983 RNA polymerase Rpb1, domain 3 ND441_RS15840 PF05000 RNA polymerase Rpb1, domain 4 ND441_RS15840 PF04998 RNA polymerase Rpb1, domain 5 ND441_RS15840 PF04997 RNA polymerase Rpb1, domain 1 ND441_RS15845 PF04563 RNA polymerase beta subunit ND441_RS15845 PF04561 RNA polymerase Rpb2, domain 2 ND441_RS15845 PF04565 RNA polymerase Rpb2, domain 3 ND441_RS15845 PF00562 RNA polymerase Rpb2, domain 6 ND441_RS15845 PF04560 RNA polymerase Rpb2, domain 7 ND441_RS15845 PF10385 RNA polymerase beta subunit external 1 domain ND441_RS15850 PF00542 Ribosomal protein L7/L12 C-terminal domain ND441_RS15850 PF16320 Ribosomal protein L7/L12 dimerisation domain ND441_RS15855 PF00466 Ribosomal protein L10 ND441_RS15860 PF00687 Ribosomal protein L1p/L10e family ND441_RS15865 PF00298 Ribosomal protein L11, RNA binding domain ND441_RS15865 PF03946 Ribosomal protein L11, N-terminal domain ND441_RS15870 PF00467 KOW motif ND441_RS15870 PF02357 Transcription termination factor nusG ND441_RS15875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ND441_RS15880 PF00009 Elongation factor Tu GTP binding domain ND441_RS15880 PF03144 Elongation factor Tu domain 2 ND441_RS15880 PF03143 Elongation factor Tu C-terminal domain ND441_RS15905 PF00485 Phosphoribulokinase / Uridine kinase family ND441_RS15910 PF03099 Biotin/lipoate A/B protein ligase family ND441_RS15910 PF08279 HTH domain ND441_RS15910 PF02237 Biotin protein ligase C terminal domain ND441_RS15915 PF01565 FAD binding domain ND441_RS15915 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ND441_RS15940 PF12724 Flavodoxin domain ND441_RS15945 PF02386 Cation transport protein ND441_RS15950 PF09186 Domain of unknown function (DUF1949) ND441_RS15950 PF01205 Uncharacterized protein family UPF0029 ND441_RS15955 PF00557 Metallopeptidase family M24 ND441_RS15960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND441_RS15960 PF00378 Enoyl-CoA hydratase/isomerase ND441_RS15960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND441_RS15965 PF02803 Thiolase, C-terminal domain ND441_RS15965 PF00108 Thiolase, N-terminal domain ND441_RS15970 PF00970 Oxidoreductase FAD-binding domain ND441_RS15970 PF00175 Oxidoreductase NAD-binding domain ND441_RS15975 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ND441_RS15985 PF02357 Transcription termination factor nusG ND441_RS15990 PF00490 Delta-aminolevulinic acid dehydratase ND441_RS15995 PF01026 TatD related DNase ND441_RS16000 PF00902 Sec-independent protein translocase protein (TatC) ND441_RS16010 PF02416 mttA/Hcf106 family ND441_RS16015 PF03109 ABC1 family ND441_RS16020 PF02036 SCP-2 sterol transfer family ND441_RS16025 PF01209 ubiE/COQ5 methyltransferase family ND441_RS16030 PF02646 RmuC family ND441_RS16035 PF09335 SNARE associated Golgi protein ND441_RS16040 PF13722 5TM C-terminal transporter carbon starvation CstA ND441_RS16040 PF02554 Carbon starvation protein CstA ND441_RS16050 PF01048 Phosphorylase superfamily ND441_RS16055 PF01738 Dienelactone hydrolase family ND441_RS16060 PF08267 Cobalamin-independent synthase, N-terminal domain ND441_RS16060 PF01717 Cobalamin-independent synthase, Catalytic domain ND441_RS16065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS16065 PF03466 LysR substrate binding domain ND441_RS16070 PF00892 EamA-like transporter family ND441_RS16080 PF03009 Glycerophosphoryl diester phosphodiesterase family ND441_RS16085 PF00005 ABC transporter ND441_RS16085 PF17912 MalK OB fold domain ND441_RS16090 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS16095 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS16100 PF13416 Bacterial extracellular solute-binding protein ND441_RS16135 PF00005 ABC transporter ND441_RS16140 PF00005 ABC transporter ND441_RS16140 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND441_RS16145 PF02653 Branched-chain amino acid transport system / permease component ND441_RS16145 PF11862 Domain of unknown function (DUF3382) ND441_RS16150 PF02653 Branched-chain amino acid transport system / permease component ND441_RS16155 PF13458 Periplasmic binding protein ND441_RS16160 PF12568 Acetyltransferase (GNAT) domain, PanZ ND441_RS16165 PF02595 Glycerate kinase family ND441_RS16170 PF02447 GntP family permease ND441_RS16175 PF05651 Putative sugar diacid recognition ND441_RS16175 PF13556 PucR C-terminal helix-turn-helix domain ND441_RS16175 PF17853 GGDEF-like domain ND441_RS16180 PF00140 Sigma-70 factor, region 1.2 ND441_RS16180 PF04542 Sigma-70 region 2 ND441_RS16180 PF04545 Sigma-70, region 4 ND441_RS16185 PF02687 FtsX-like permease family ND441_RS16185 PF18075 FtsX extracellular domain ND441_RS16190 PF00005 ABC transporter ND441_RS16195 PF00448 SRP54-type protein, GTPase domain ND441_RS16195 PF00448 SRP54-type protein, GTPase domain ND441_RS16195 PF02881 SRP54-type protein, helical bundle domain ND441_RS16195 PF02881 SRP54-type protein, helical bundle domain ND441_RS16205 PF06611 Protein of unknown function (DUF1145) ND441_RS16220 PF07947 YhhN family ND441_RS16225 PF00403 Heavy-metal-associated domain ND441_RS16230 PF01206 Sulfurtransferase TusA ND441_RS16235 PF02592 Putative vitamin uptake transporter ND441_RS16240 PF08786 DcrB ND441_RS16245 PF02754 Cysteine-rich domain ND441_RS16245 PF13183 4Fe-4S dicluster domain ND441_RS16250 PF00890 FAD binding domain ND441_RS16255 PF01266 FAD dependent oxidoreductase ND441_RS16255 PF04324 BFD-like [2Fe-2S] binding domain ND441_RS16265 PF07690 Major Facilitator Superfamily ND441_RS16270 PF03009 Glycerophosphoryl diester phosphodiesterase family ND441_RS16280 PF12146 Serine aminopeptidase, S33 ND441_RS16285 PF01810 LysE type translocator ND441_RS16290 PF00270 DEAD/DEAH box helicase ND441_RS16290 PF00271 Helicase conserved C-terminal domain ND441_RS16290 PF00570 HRDC domain ND441_RS16290 PF16124 RecQ zinc-binding ND441_RS16290 PF09382 RQC domain ND441_RS16295 PF02253 Phospholipase A1 ND441_RS16300 PF03061 Thioesterase superfamily ND441_RS16305 PF00892 EamA-like transporter family ND441_RS16310 PF01544 CorA-like Mg2+ transporter protein ND441_RS16320 PF09370 Phosphoenolpyruvate hydrolase-like ND441_RS16335 PF13361 UvrD-like helicase C-terminal domain ND441_RS16335 PF00580 UvrD/REP helicase N-terminal domain ND441_RS16340 PF13419 Haloacid dehalogenase-like hydrolase ND441_RS16345 PF00589 Phage integrase family ND441_RS16345 PF02899 Phage integrase, N-terminal SAM-like domain ND441_RS16350 PF04340 Protein of unknown function, DUF484 ND441_RS16355 PF01678 Diaminopimelate epimerase ND441_RS16360 PF13627 Prokaryotic lipoprotein-attachment site ND441_RS16365 PF01491 Frataxin-like domain ND441_RS16370 PF12633 Adenylate cyclase NT domain ND441_RS16370 PF01295 Adenylate cyclase, class-I ND441_RS16375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ND441_RS16375 PF03900 Porphobilinogen deaminase, C-terminal domain ND441_RS16380 PF02602 Uroporphyrinogen-III synthase HemD ND441_RS16385 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ND441_RS16390 PF07219 HemY protein N-terminus ND441_RS16390 PF07719 Tetratricopeptide repeat ND441_RS16420 PF00324 Amino acid permease ND441_RS16425 PF03808 Glycosyl transferase WecB/TagA/CpsF family ND441_RS16430 PF06899 WzyE protein, O-antigen assembly polymerase ND441_RS16435 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ND441_RS16440 PF01943 Polysaccharide biosynthesis protein ND441_RS16445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND441_RS16455 PF00483 Nucleotidyl transferase ND441_RS16460 PF16363 GDP-mannose 4,6 dehydratase ND441_RS16465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND441_RS16465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND441_RS16465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND441_RS16470 PF02350 UDP-N-acetylglucosamine 2-epimerase ND441_RS16475 PF02706 Chain length determinant protein ND441_RS16480 PF00953 Glycosyl transferase family 4 ND441_RS16485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND441_RS16485 PF07498 Rho termination factor, N-terminal domain ND441_RS16485 PF07497 Rho termination factor, RNA-binding domain ND441_RS16490 PF00085 Thioredoxin ND441_RS16495 PF00270 DEAD/DEAH box helicase ND441_RS16495 PF00271 Helicase conserved C-terminal domain ND441_RS16500 PF02541 Ppx/GppA phosphatase family ND441_RS16505 PF00580 UvrD/REP helicase N-terminal domain ND441_RS16505 PF13361 UvrD-like helicase C-terminal domain ND441_RS16515 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ND441_RS16515 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ND441_RS16520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS16520 PF03466 LysR substrate binding domain ND441_RS16525 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND441_RS16525 PF18416 N-acetylglucosamine binding protein domain 2 ND441_RS16530 PF00291 Pyridoxal-phosphate dependent enzyme ND441_RS16530 PF00585 C-terminal regulatory domain of Threonine dehydratase ND441_RS16535 PF00920 Dehydratase family ND441_RS16540 PF01063 Amino-transferase class IV ND441_RS16550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND441_RS16550 PF00205 Thiamine pyrophosphate enzyme, central domain ND441_RS16550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND441_RS16555 PF08046 IlvGEDA operon leader peptide ND441_RS16560 PF13335 Magnesium chelatase, subunit ChlI C-terminal ND441_RS16560 PF01078 Magnesium chelatase, subunit ChlI ND441_RS16565 PF04219 Protein of unknown function, DUF ND441_RS16570 PF03466 LysR substrate binding domain ND441_RS16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS16620 PF01177 Asp/Glu/Hydantoin racemase ND441_RS16625 PF07715 TonB-dependent Receptor Plug Domain ND441_RS16625 PF00593 TonB dependent receptor ND441_RS16630 PF05958 tRNA (Uracil-5-)-methyltransferase ND441_RS16635 PF07226 Protein of unknown function (DUF1422) ND441_RS16640 PF00440 Bacterial regulatory proteins, tetR family ND441_RS16645 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS16645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND441_RS16650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS16650 PF03466 LysR substrate binding domain ND441_RS16655 PF00462 Glutaredoxin ND441_RS16655 PF08534 Redoxin ND441_RS16660 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND441_RS16660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND441_RS16680 PF00529 HlyD membrane-fusion protein of T1SS ND441_RS16685 PF00664 ABC transporter transmembrane region ND441_RS16685 PF00005 ABC transporter ND441_RS16695 PF07715 TonB-dependent Receptor Plug Domain ND441_RS16695 PF00593 TonB dependent receptor ND441_RS16700 PF14698 Argininosuccinate lyase C-terminal ND441_RS16700 PF00206 Lyase ND441_RS16705 PF00764 Arginosuccinate synthase ND441_RS16710 PF00696 Amino acid kinase family ND441_RS16715 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND441_RS16715 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND441_RS16720 PF01546 Peptidase family M20/M25/M40 ND441_RS16720 PF07687 Peptidase dimerisation domain ND441_RS16725 PF00311 Phosphoenolpyruvate carboxylase ND441_RS16735 PF02219 Methylenetetrahydrofolate reductase ND441_RS16755 PF03447 Homoserine dehydrogenase, NAD binding domain ND441_RS16755 PF00742 Homoserine dehydrogenase ND441_RS16755 PF00696 Amino acid kinase family ND441_RS16760 PF01053 Cys/Met metabolism PLP-dependent enzyme ND441_RS16765 PF01340 Met Apo-repressor, MetJ ND441_RS16770 PF01197 Ribosomal protein L31 ND441_RS16775 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ND441_RS16775 PF00270 DEAD/DEAH box helicase ND441_RS16775 PF00271 Helicase conserved C-terminal domain ND441_RS16775 PF17764 3′ DNA-binding domain (3′BD) ND441_RS16775 PF18074 Primosomal protein N C-terminal domain ND441_RS16780 PF00356 Bacterial regulatory proteins, lacI family ND441_RS16785 PF05036 Sporulation related domain ND441_RS16790 PF00227 Proteasome subunit ND441_RS16795 PF07724 AAA domain (Cdc48 subfamily) ND441_RS16795 PF00004 ATPase family associated with various cellular activities (AAA) ND441_RS16795 PF10431 C-terminal, D2-small domain, of ClpB protein ND441_RS16800 PF01040 UbiA prenyltransferase family ND441_RS16805 PF03737 Aldolase/RraA ND441_RS16810 PF06005 Cell division protein ZapB ND441_RS16815 PF00230 Major intrinsic protein ND441_RS16820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND441_RS16820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND441_RS16825 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ND441_RS16830 PF07690 Major Facilitator Superfamily ND441_RS16835 PF00175 Oxidoreductase NAD-binding domain ND441_RS16835 PF00970 Oxidoreductase FAD-binding domain ND441_RS16840 PF05656 Protein of unknown function (DUF805) ND441_RS16845 PF07305 Protein of unknown function (DUF1454) ND441_RS16850 PF00121 Triosephosphate isomerase ND441_RS16860 PF00365 Phosphofructokinase ND441_RS16865 PF16916 Dimerisation domain of Zinc Transporter ND441_RS16865 PF01545 Cation efflux family ND441_RS16870 PF07813 LTXXQ motif family protein ND441_RS16875 PF00072 Response regulator receiver domain ND441_RS16875 PF00486 Transcriptional regulatory protein, C terminal ND441_RS16880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS16880 PF16527 Two-component sensor protein CpxA, periplasmic domain ND441_RS16880 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS16880 PF00672 HAMP domain ND441_RS16885 PF00588 SpoU rRNA Methylase family ND441_RS16890 PF00132 Bacterial transferase hexapeptide (six repeats) ND441_RS16890 PF06426 Serine acetyltransferase, N-terminal ND441_RS16895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ND441_RS16895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ND441_RS16900 PF02556 Preprotein translocase subunit SecB ND441_RS16905 PF00462 Glutaredoxin ND441_RS16910 PF00581 Rhodanese-like domain ND441_RS16915 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ND441_RS16915 PF01676 Metalloenzyme superfamily ND441_RS16920 PF01551 Peptidase family M23 ND441_RS16925 PF04748 Divergent polysaccharide deacetylase ND441_RS16930 PF08240 Alcohol dehydrogenase GroES-like domain ND441_RS16930 PF00107 Zinc-binding dehydrogenase ND441_RS16935 PF00155 Aminotransferase class I and II ND441_RS16940 PF01370 NAD dependent epimerase/dehydratase family ND441_RS16945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND441_RS16950 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND441_RS16955 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ND441_RS16960 PF00535 Glycosyl transferase family 2 ND441_RS16965 PF01467 Cytidylyltransferase-like ND441_RS16970 PF06827 Zinc finger found in FPG and IleRS ND441_RS16970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ND441_RS16970 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ND441_RS16975 PF00471 Ribosomal protein L33 ND441_RS16980 PF00830 Ribosomal L28 family ND441_RS16985 PF04002 RadC-like JAB domain ND441_RS16990 PF02441 Flavoprotein ND441_RS16990 PF04127 DNA / pantothenate metabolism flavoprotein ND441_RS16995 PF00692 dUTPase ND441_RS17000 PF00440 Bacterial regulatory proteins, tetR family ND441_RS17005 PF00156 Phosphoribosyl transferase domain ND441_RS17010 PF03725 3' exoribonuclease family, domain 2 ND441_RS17010 PF01138 3' exoribonuclease family, domain 1 ND441_RS17015 PF08340 Domain of unknown function (DUF1732) ND441_RS17015 PF03755 YicC-like family, N-terminal region ND441_RS17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND441_RS17025 PF03466 LysR substrate binding domain ND441_RS17030 PF00563 EAL domain ND441_RS17030 PF13426 PAS domain ND441_RS17030 PF00990 Diguanylate cyclase, GGDEF domain ND441_RS17035 PF00378 Enoyl-CoA hydratase/isomerase ND441_RS17040 PF07670 Nucleoside recognition ND441_RS17040 PF07662 Na+ dependent nucleoside transporter C-terminus ND441_RS17040 PF01773 Na+ dependent nucleoside transporter N-terminus ND441_RS17050 PF03458 UPF0126 domain ND441_RS17055 PF01653 NAD-dependent DNA ligase adenylation domain ND441_RS17055 PF03120 NAD-dependent DNA ligase OB-fold domain ND441_RS17060 PF00625 Guanylate kinase ND441_RS17065 PF01192 RNA polymerase Rpb6 ND441_RS17070 PF13291 ACT domain ND441_RS17070 PF04607 Region found in RelA / SpoT proteins ND441_RS17070 PF02824 TGS domain ND441_RS17075 PF00588 SpoU rRNA Methylase family ND441_RS17075 PF12105 SpoU, rRNA methylase, C-terminal ND441_RS17080 PF00270 DEAD/DEAH box helicase ND441_RS17080 PF00271 Helicase conserved C-terminal domain ND441_RS17080 PF17191 RecG wedge domain ND441_RS17085 PF03616 Sodium/glutamate symporter ND441_RS17090 PF00860 Permease family ND441_RS17095 PF05170 AsmA family ND441_RS17100 PF00583 Acetyltransferase (GNAT) family ND441_RS17100 PF09500 Putative thioesterase (yiiD_Cterm) ND441_RS17105 PF02580 D-Tyr-tRNA(Tyr) deacylase ND441_RS17110 PF03631 Virulence factor BrkB ND441_RS17115 PF13419 Haloacid dehalogenase-like hydrolase ND441_RS17120 PF03144 Elongation factor Tu domain 2 ND441_RS17120 PF00009 Elongation factor Tu GTP binding domain ND441_RS17120 PF00679 Elongation factor G C-terminus ND441_RS17125 PF00120 Glutamine synthetase, catalytic domain ND441_RS17125 PF03951 Glutamine synthetase, beta-Grasp domain ND441_RS17130 PF00989 PAS fold ND441_RS17130 PF00512 His Kinase A (phospho-acceptor) domain ND441_RS17130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND441_RS17135 PF00158 Sigma-54 interaction domain ND441_RS17135 PF00072 Response regulator receiver domain ND441_RS17135 PF02954 Bacterial regulatory protein, Fis family ND441_RS17140 PF04055 Radical SAM superfamily ND441_RS17140 PF06969 HemN C-terminal domain ND441_RS17145 PF04220 Der GTPase activator (YihI) ND441_RS17150 PF01926 50S ribosome-binding GTPase ND441_RS17155 PF01612 3'-5' exonuclease ND441_RS17155 PF00476 DNA polymerase family A ND441_RS17155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND441_RS17155 PF01367 5'-3' exonuclease, C-terminal SAM fold ND441_RS17160 PF01323 DSBA-like thioredoxin domain ND441_RS17165 PF01636 Phosphotransferase enzyme family ND441_RS17170 PF06288 Protein of unknown function (DUF1040) ND441_RS17175 PF12804 MobA-like NTP transferase domain ND441_RS17180 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ND441_RS17205 PF00392 Bacterial regulatory proteins, gntR family ND441_RS17205 PF07729 FCD domain ND441_RS17210 PF00356 Bacterial regulatory proteins, lacI family ND441_RS17215 PF00294 pfkB family carbohydrate kinase ND441_RS17220 PF13407 Periplasmic binding protein domain ND441_RS17225 PF02653 Branched-chain amino acid transport system / permease component ND441_RS17230 PF00005 ABC transporter ND441_RS17235 PF05025 RbsD / FucU transport protein family ND441_RS17240 PF02705 K+ potassium transporter ND441_RS17245 PF12592 Protein of unknown function (DUF3763) ND441_RS17245 PF17868 AAA lid domain ND441_RS17245 PF07728 AAA domain (dynein-related subfamily) ND441_RS17250 PF05762 VWA domain containing CoxE-like protein ND441_RS17260 PF03590 Aspartate-ammonia ligase ND441_RS17265 PF01037 Lrp/AsnC ligand binding domain ND441_RS17270 PF00258 Flavodoxin ND441_RS17275 PF01134 Glucose inhibited division protein A ND441_RS17275 PF13932 GidA associated domain ND441_RS17280 PF02527 rRNA small subunit methyltransferase G ND441_RS17285 PF03899 ATP synthase I chain ND441_RS17290 PF00119 ATP synthase A chain ND441_RS17295 PF00137 ATP synthase subunit C ND441_RS17300 PF00430 ATP synthase B/B' CF(0) ND441_RS17305 PF00213 ATP synthase delta (OSCP) subunit ND441_RS17310 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND441_RS17310 PF00306 ATP synthase alpha/beta chain, C terminal domain ND441_RS17310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND441_RS17315 PF00231 ATP synthase ND441_RS17320 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND441_RS17320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND441_RS17325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ND441_RS17325 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ND441_RS17330 PF12804 MobA-like NTP transferase domain ND441_RS17330 PF00132 Bacterial transferase hexapeptide (six repeats) ND441_RS17335 PF01380 SIS domain ND441_RS17340 PF12849 PBP superfamily domain ND441_RS17345 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS17350 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS17355 PF00005 ABC transporter ND441_RS17360 PF01895 PhoU domain ND441_RS17365 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND441_RS17370 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS17375 PF00528 Binding-protein-dependent transport system inner membrane component ND441_RS17380 PF00860 Permease family ND441_RS17385 PF00672 HAMP domain ND441_RS17385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND441_RS17385 PF02203 Tar ligand binding domain homologue ND441_RS17395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND441_RS17395 PF02753 Pili assembly chaperone PapD, C-terminal domain ND441_RS17400 PF00577 Outer membrane usher protein ND441_RS17400 PF13953 PapC C-terminal domain ND441_RS17400 PF13954 PapC N-terminal domain ND441_RS17410 PF10396 GTP-binding protein TrmE N-terminus ND441_RS17410 PF12631 MnmE helical domain ND441_RS17410 PF01926 50S ribosome-binding GTPase ND441_RS17415 PF14849 YidC periplasmic domain ND441_RS17415 PF02096 60Kd inner membrane protein ND441_RS17420 PF01809 Putative membrane protein insertion efficiency factor ND441_RS17425 PF00825 Ribonuclease P ND441_RS17430 PF00468 Ribosomal protein L34 ND441_RS17435 PF07484 Phage Tail Collar Domain ND441_RS17435 PF03335 Phage tail fibre repeat ND441_RS17435 PF08400 Prophage tail fibre N-terminal ND441_RS17485 PF04984 Phage tail sheath protein subtilisin-like domain ND441_RS17485 PF17482 Phage tail sheath C-terminal domain ND441_RS17510 PF10124 Mu-like prophage major head subunit gpT ND441_RS17535 PF06074 Protein of unknown function (DUF935) ND441_RS17590 PF06252 Protein of unknown function (DUF1018) ND441_RS17655 PF13693 Winged helix-turn-helix DNA-binding ND441_RS17680 PF00437 Type II/IV secretion system protein ND441_RS17690 PF13362 Toprim domain ND441_RS17690 PF18818 Metallopeptidase superfamily domain ND441_RS17690 PF08401 Domain of unknown function (DUF1738) ND441_RS17795 PF18821 Large polyvalent protein-associated domain 7 ND441_RS17795 PF03432 Relaxase/Mobilisation nuclease domain ND441_RS17820 PF01381 Helix-turn-helix ND441_RS17885 PF06406 StbA protein ND441_RS17890 PF13614 AAA domain ND441_RS17900 PF02796 Helix-turn-helix domain of resolvase ND441_RS17900 PF00239 Resolvase, N terminal domain ND441_RS17915 PF13610 DDE domain ND441_RS17920 PF00239 Resolvase, N terminal domain ND441_RS17920 PF02796 Helix-turn-helix domain of resolvase ND441_RS17925 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ND441_RS17930 PF13610 DDE domain ND441_RS17945 PF00756 Putative esterase ND441_RS17955 PF08240 Alcohol dehydrogenase GroES-like domain ND441_RS17955 PF00107 Zinc-binding dehydrogenase ND441_RS17960 PF02583 Metal-sensitive transcriptional repressor ND441_RS17965 PF00465 Iron-containing alcohol dehydrogenase ND441_RS17985 PF02796 Helix-turn-helix domain of resolvase ND441_RS17985 PF00239 Resolvase, N terminal domain ND441_RS18070 PF00437 Type II/IV secretion system protein ND441_RS18085 PF01464 Transglycosylase SLT domain ND441_RS18095 PF04917 Bacterial shufflon protein, N-terminal constant region ND441_RS18100 PF00239 Resolvase, N terminal domain ND441_RS18100 PF02796 Helix-turn-helix domain of resolvase ND441_RS18105 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND441_RS18110 PF02413 Caudovirales tail fibre assembly protein, lambda gpK